Start: 2014-03-16 17:48:29 UTC Package: libhypre-dev Priority: extra Section: libdevel Installed-Size: 1128 Maintainer: Debian Science Maintainers Architecture: all Source: hypre Version: 2.4.0b-7 Depends: libhypre-2.4.0 (>= 2.4.0b-7), libsuperlu3-dev, mpi-default-dev, libblas-dev | libblas-3gf.so, liblapack-dev | liblapack-3gf.so Suggests: hypre-doc Filename: pool/main/h/hypre/libhypre-dev_2.4.0b-7_all.deb Size: 159710 MD5sum: 1ebfd800c02bf3be8bc6a8789a9bea5e SHA1: fbfa16f277673698fbc5590354db2617d29cdbeb SHA256: 32216b69e198b071a37f17492be188c5c94d2b50999515c94679c8c24dce74e0 Description: High Performance Matrix Preconditioners - Development Files Hypre is a set of matrix preconditioning libraries to aid in the solution of large systems of linear equations. . This package contains the headers and symlinks necessary to develop programs which use hypre. Homepage: http://acts.nersc.gov/hypre/ Tag: devel::library, role::devel-lib Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 35m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt libhypre-dev=2.4.0b-7 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at http://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.57.1~201403012113~0.57-23-gfd8571c starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt libhypre-dev=2.4.0b-7 0m0.0s INFO: Running on: Linux piu-slave-bm-a 3.2.0-4-amd64 #1 SMP Debian 3.2.54-2 x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpYfkLAl 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpYfkLAl 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.8s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ squeeze main 0m1.8s DEBUG: Created policy-rc.d and chmodded it. 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'update'] 0m1.8s DUMP: Hit http://mirror.bm.debian.org squeeze Release.gpg Ign http://mirror.bm.debian.org/debian/ squeeze/main Translation-en Hit http://mirror.bm.debian.org squeeze Release Hit http://mirror.bm.debian.org squeeze/main amd64 Packages Reading package lists... 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'update'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', '-yf', 'dist-upgrade'] 0m2.1s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', '-yf', 'dist-upgrade'] 0m2.1s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpYfkLAl/tmp/scripts/ 0m2.1s DEBUG: Copying scriptsdir /etc/piuparts/scripts-squeeze to /srv/piuparts.debian.org/tmp/tmpYfkLAl/tmp/scripts/ 0m2.1s INFO: Running scripts post_setup 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_experimental'] 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_experimental'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_forbid_home'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_forbid_home'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m3.0s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (25.5 MB/s) Selecting previously deselected package adduser. (Reading database ... 6135 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'clean'] 0m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'clean'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--get-selections', '*'] 0m3.6s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install liblocale-gettext-perl install liblzma2 install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install ncurses-base install ncurses-bin install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--get-selections', '*'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg-divert', '--list'] 0m3.6s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg-divert', '--list'] 0m3.6s INFO: apt-cache does not know about any of the requested packages 0m3.6s INFO: Running scripts pre_test 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_test_root_password'] 0m3.6s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_test_root_password'] 0m3.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m3.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m4.7s DEBUG: No broken symlinks as far as we can find. 0m4.7s INFO: Running scripts pre_install 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_install_database-server'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_install_database-server'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_install_exceptions'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_install_exceptions'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_install_extras'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_install_extras'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-cache', 'show', 'libhypre-dev=2.4.0b-7'] 0m4.8s DUMP: Package: libhypre-dev Priority: extra Section: libdevel Installed-Size: 1128 Maintainer: Debian Science Maintainers Architecture: all Source: hypre Version: 2.4.0b-7 Depends: libhypre-2.4.0 (>= 2.4.0b-7), libsuperlu3-dev, mpi-default-dev, libblas-dev | libblas-3gf.so, liblapack-dev | liblapack-3gf.so Suggests: hypre-doc Filename: pool/main/h/hypre/libhypre-dev_2.4.0b-7_all.deb Size: 159710 MD5sum: 1ebfd800c02bf3be8bc6a8789a9bea5e SHA1: fbfa16f277673698fbc5590354db2617d29cdbeb SHA256: 32216b69e198b071a37f17492be188c5c94d2b50999515c94679c8c24dce74e0 Description: High Performance Matrix Preconditioners - Development Files Hypre is a set of matrix preconditioning libraries to aid in the solution of large systems of linear equations. . This package contains the headers and symlinks necessary to develop programs which use hypre. Homepage: http://acts.nersc.gov/hypre/ Tag: devel::library, role::devel-lib 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-cache', 'show', 'libhypre-dev=2.4.0b-7'] 0m4.8s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed Depends: libhypre-2.4.0 (>= 2.4.0b-7), libsuperlu3-dev, mpi-default-dev, libblas-dev | libblas-3gf.so, liblapack-dev | liblapack-3gf.so 0m4.8s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmphfISMN/piuparts-depends-dummy'] 0m4.8s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmphfISMN/piuparts-depends-dummy.deb'. 0m4.8s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmphfISMN/piuparts-depends-dummy'] 0m4.8s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmphfISMN/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmpYfkLAl/tmp 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m4.8s DUMP: Selecting previously deselected package piuparts-depends-dummy. (Reading database ... 6258 files and directories currently installed.) Unpacking piuparts-depends-dummy (from tmp/piuparts-depends-dummy.deb) ... dpkg: dependency problems prevent configuration of piuparts-depends-dummy: piuparts-depends-dummy depends on libhypre-2.4.0 (>= 2.4.0b-7); however: Package libhypre-2.4.0 is not installed. piuparts-depends-dummy depends on libsuperlu3-dev; however: Package libsuperlu3-dev is not installed. piuparts-depends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. piuparts-depends-dummy depends on libblas-dev | libblas-3gf.so; however: Package libblas-dev is not installed. Package libblas-3gf.so is not installed. piuparts-depends-dummy depends on liblapack-dev | liblapack-3gf.so; however: Package liblapack-dev is not installed. Package liblapack-3gf.so is not installed. dpkg: error processing piuparts-depends-dummy (--install): dependency problems - leaving unconfigured Errors were encountered while processing: piuparts-depends-dummy 0m4.8s DEBUG: Command failed (status=1), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', '-yf', 'install'] 0m6.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Correcting dependencies... Done The following extra packages will be installed: libblas-dev libblas3gf libgfortran3 libhypre-2.4.0 libibverbs-dev libibverbs1 liblapack-dev liblapack3gf libnuma1 libopenmpi-dev libopenmpi1.3 libsuperlu3 libsuperlu3-dev libtorque2 mpi-default-dev openmpi-common The following NEW packages will be installed: libblas-dev libblas3gf libgfortran3 libhypre-2.4.0 libibverbs-dev libibverbs1 liblapack-dev liblapack3gf libnuma1 libopenmpi-dev libopenmpi1.3 libsuperlu3 libsuperlu3-dev libtorque2 mpi-default-dev openmpi-common 0 upgraded, 16 newly installed, 0 to remove and 0 not upgraded. 1 not fully installed or removed. Need to get 17.0 MB of archives. After this operation, 52.7 MB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libgfortran3 amd64 4.4.5-8 [291 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main libblas3gf amd64 1.2-8 [229 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main liblapack3gf amd64 3.2.1-8 [4434 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main libibverbs1 amd64 1.1.3-2 [33.7 kB] Get:5 http://mirror.bm.debian.org/debian/ squeeze/main libnuma1 amd64 2.0.5-1 [26.7 kB] Get:6 http://mirror.bm.debian.org/debian/ squeeze/main libtorque2 amd64 2.4.8+dfsg-9squeeze3 [115 kB] Get:7 http://mirror.bm.debian.org/debian/ squeeze/main libopenmpi1.3 amd64 1.4.2-4 [1400 kB] Get:8 http://mirror.bm.debian.org/debian/ squeeze/main libsuperlu3 amd64 3.0+20070106-3 [170 kB] Get:9 http://mirror.bm.debian.org/debian/ squeeze/main libhypre-2.4.0 amd64 2.4.0b-7 [1752 kB] Get:10 http://mirror.bm.debian.org/debian/ squeeze/main libblas-dev amd64 1.2-8 [252 kB] Get:11 http://mirror.bm.debian.org/debian/ squeeze/main libsuperlu3-dev amd64 3.0+20070106-3 [573 kB] Get:12 http://mirror.bm.debian.org/debian/ squeeze/main openmpi-common all 1.4.2-4 [89.5 kB] Get:13 http://mirror.bm.debian.org/debian/ squeeze/main libibverbs-dev amd64 1.1.3-2 [83.3 kB] Get:14 http://mirror.bm.debian.org/debian/ squeeze/main libopenmpi-dev amd64 1.4.2-4 [2726 kB] Get:15 http://mirror.bm.debian.org/debian/ squeeze/main mpi-default-dev amd64 0.6 [3202 B] Get:16 http://mirror.bm.debian.org/debian/ squeeze/main liblapack-dev amd64 3.2.1-8 [4817 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 17.0 MB in 0s (28.6 MB/s) Selecting previously deselected package libgfortran3. (Reading database ... 6258 files and directories currently installed.) Unpacking libgfortran3 (from .../libgfortran3_4.4.5-8_amd64.deb) ... Selecting previously deselected package libblas3gf. Unpacking libblas3gf (from .../libblas3gf_1.2-8_amd64.deb) ... Selecting previously deselected package liblapack3gf. Unpacking liblapack3gf (from .../liblapack3gf_3.2.1-8_amd64.deb) ... Selecting previously deselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.3-2_amd64.deb) ... Selecting previously deselected package libnuma1. Unpacking libnuma1 (from .../libnuma1_2.0.5-1_amd64.deb) ... Selecting previously deselected package libtorque2. Unpacking libtorque2 (from .../libtorque2_2.4.8+dfsg-9squeeze3_amd64.deb) ... Selecting previously deselected package libopenmpi1.3. Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.2-4_amd64.deb) ... Selecting previously deselected package libsuperlu3. Unpacking libsuperlu3 (from .../libsuperlu3_3.0+20070106-3_amd64.deb) ... Selecting previously deselected package libhypre-2.4.0. Unpacking libhypre-2.4.0 (from .../libhypre-2.4.0_2.4.0b-7_amd64.deb) ... Selecting previously deselected package libblas-dev. Unpacking libblas-dev (from .../libblas-dev_1.2-8_amd64.deb) ... Selecting previously deselected package libsuperlu3-dev. Unpacking libsuperlu3-dev (from .../libsuperlu3-dev_3.0+20070106-3_amd64.deb) ... Selecting previously deselected package openmpi-common. Unpacking openmpi-common (from .../openmpi-common_1.4.2-4_all.deb) ... Selecting previously deselected package libibverbs-dev. Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.3-2_amd64.deb) ... Selecting previously deselected package libopenmpi-dev. Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.4.2-4_amd64.deb) ... Selecting previously deselected package mpi-default-dev. Unpacking mpi-default-dev (from .../mpi-default-dev_0.6_amd64.deb) ... Selecting previously deselected package liblapack-dev. Unpacking liblapack-dev (from .../liblapack-dev_3.2.1-8_amd64.deb) ... Setting up libgfortran3 (4.4.5-8) ... Setting up libblas3gf (1.2-8) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up liblapack3gf (3.2.1-8) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up libibverbs1 (1.1.3-2) ... Setting up libnuma1 (2.0.5-1) ... Setting up libtorque2 (2.4.8+dfsg-9squeeze3) ... Setting up libopenmpi1.3 (1.4.2-4) ... Setting up libsuperlu3 (3.0+20070106-3) ... Setting up libhypre-2.4.0 (2.4.0b-7) ... Setting up libblas-dev (1.2-8) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode. Setting up libsuperlu3-dev (3.0+20070106-3) ... Setting up openmpi-common (1.4.2-4) ... Setting up libibverbs-dev (1.1.3-2) ... Setting up libopenmpi-dev (1.4.2-4) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode. Setting up mpi-default-dev (0.6) ... Setting up liblapack-dev (3.2.1-8) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode. Setting up piuparts-depends-dummy (0.invalid.0) ... 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', '-yf', 'install'] 0m6.9s INFO: Installation of ['tmp/piuparts-depends-dummy.deb'] ok 0m6.9s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmpYfkLAl/tmp/piuparts-depends-dummy.deb 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m7.0s DUMP: piuparts-depends-dummy install ok installed 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m7.0s DUMP: (Reading database ... 7334 files and directories currently installed.) Removing piuparts-depends-dummy ... 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'clean'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'clean'] 0m7.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m7.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m8.7s ERROR: WARN: Broken symlinks: /usr/share/doc/libsuperlu-dev/tests/MATGEN/slu_Cnames.h -> ../../SRC/slu_Cnames.h 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-cache', 'policy'] 0m8.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages release v=6.0.9,o=Debian,a=oldstable,n=squeeze,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-cache', 'policy'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-cache', 'policy', 'libhypre-dev'] 0m8.8s DUMP: libhypre-dev: Installed: (none) Candidate: 2.4.0b-7 Version table: 2.4.0b-7 0 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-cache', 'policy', 'libhypre-dev'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', '-y', 'install', 'libhypre-dev=2.4.0b-7'] 0m9.4s DUMP: Reading package lists... Building dependency tree... Reading state information... Suggested packages: hypre-doc The following NEW packages will be installed: libhypre-dev 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 160 kB of archives. After this operation, 1155 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libhypre-dev all 2.4.0b-7 [160 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 160 kB in 0s (6225 kB/s) Selecting previously deselected package libhypre-dev. (Reading database ... 7334 files and directories currently installed.) Unpacking libhypre-dev (from .../libhypre-dev_2.4.0b-7_all.deb) ... Setting up libhypre-dev (2.4.0b-7) ... 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', '-y', 'install', 'libhypre-dev=2.4.0b-7'] 0m9.4s INFO: Running scripts post_install 0m9.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m9.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m10.6s ERROR: WARN: Broken symlinks: /usr/share/doc/libsuperlu-dev/tests/MATGEN/slu_Cnames.h -> ../../SRC/slu_Cnames.h 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--get-selections', '*'] 0m10.6s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblas-dev install libblas3gf install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install libgfortran3 install libhypre-2.4.0 install libhypre-dev install libibverbs-dev install libibverbs1 install liblapack-dev install liblapack3gf install liblocale-gettext-perl install liblzma2 install libncurses5 install libnuma1 install libopenmpi-dev install libopenmpi1.3 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libsuperlu3 install libsuperlu3-dev install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libtorque2 install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install mpi-default-dev install ncurses-base install ncurses-bin install openmpi-common install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--get-selections', '*'] 0m11.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', '-ac'] 0m12.0s DUMP: debsums: no md5sums for mawk 0m12.0s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', '-ac'] 0m12.0s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m12.0s DUMP: 0.11.3~bpo70+1 0m12.0s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m12.0s INFO: Running adequate version 0.11.3~bpo70+1 now. 0m12.0s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'libhypre-dev'] 0m12.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'libhypre-dev'] 0m12.1s INFO: Running scripts pre_remove 0m12.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m12.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m12.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m12.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m12.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m12.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m12.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m12.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m12.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_exceptions'] 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/pre_remove_exceptions'] 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'remove', 'liblapack3gf', 'libsuperlu3-dev', 'libsuperlu3', 'libblas3gf', 'openmpi-common', 'mpi-default-dev', 'libopenmpi-dev', 'liblapack-dev', 'libhypre-2.4.0', 'libibverbs1', 'libibverbs-dev', 'libgfortran3', 'libblas-dev', 'libopenmpi1.3', 'libnuma1', 'libtorque2', 'libhypre-dev'] 0m12.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libblas-dev libblas3gf libgfortran3 libhypre-2.4.0 libhypre-dev libibverbs-dev libibverbs1 liblapack-dev liblapack3gf libnuma1 libopenmpi-dev libopenmpi1.3 libsuperlu3 libsuperlu3-dev libtorque2 mpi-default-dev openmpi-common 0 upgraded, 0 newly installed, 17 to remove and 0 not upgraded. After this operation, 53.9 MB disk space will be freed. (Reading database ... 7420 files and directories currently installed.) Removing libhypre-dev ... Removing libsuperlu3-dev ... Removing liblapack-dev ... Removing libblas-dev ... Removing libhypre-2.4.0 ... Removing libsuperlu3 ... Removing liblapack3gf ... Removing libblas3gf ... Removing mpi-default-dev ... Removing libopenmpi-dev ... Removing libopenmpi1.3 ... Removing libgfortran3 ... Removing libibverbs-dev ... Removing libibverbs1 ... Removing libnuma1 ... Removing libtorque2 ... Removing openmpi-common ... 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'remove', 'liblapack3gf', 'libsuperlu3-dev', 'libsuperlu3', 'libblas3gf', 'openmpi-common', 'mpi-default-dev', 'libopenmpi-dev', 'liblapack-dev', 'libhypre-2.4.0', 'libibverbs1', 'libibverbs-dev', 'libgfortran3', 'libblas-dev', 'libopenmpi1.3', 'libnuma1', 'libtorque2', 'libhypre-dev'] 0m12.9s INFO: Running scripts post_remove 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_remove_exceptions_lenny'] 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_remove_exceptions_lenny'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_remove_extras'] 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_remove_extras'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--purge', 'liblapack3gf', 'libsuperlu3-dev', 'libsuperlu3', 'libblas3gf', 'openmpi-common', 'mpi-default-dev', 'libopenmpi-dev', 'liblapack-dev', 'libhypre-2.4.0', 'libibverbs1', 'libibverbs-dev', 'libgfortran3', 'libblas-dev', 'libopenmpi1.3', 'libnuma1', 'libtorque2'] 0m13.0s DUMP: (Reading database ... 6258 files and directories currently installed.) Removing liblapack3gf ... Purging configuration files for liblapack3gf ... dpkg: warning: ignoring request to remove libsuperlu3-dev which isn't installed. Removing libsuperlu3 ... Purging configuration files for libsuperlu3 ... Removing libblas3gf ... Purging configuration files for libblas3gf ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed. dpkg: warning: ignoring request to remove mpi-default-dev which isn't installed. dpkg: warning: ignoring request to remove libopenmpi-dev which isn't installed. dpkg: warning: ignoring request to remove liblapack-dev which isn't installed. Removing libhypre-2.4.0 ... Purging configuration files for libhypre-2.4.0 ... Removing libibverbs1 ... Purging configuration files for libibverbs1 ... dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed. Removing libgfortran3 ... Purging configuration files for libgfortran3 ... dpkg: warning: ignoring request to remove libblas-dev which isn't installed. Removing libopenmpi1.3 ... Purging configuration files for libopenmpi1.3 ... Removing libnuma1 ... Purging configuration files for libnuma1 ... Removing libtorque2 ... Purging configuration files for libtorque2 ... 0m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--purge', 'liblapack3gf', 'libsuperlu3-dev', 'libsuperlu3', 'libblas3gf', 'openmpi-common', 'mpi-default-dev', 'libopenmpi-dev', 'liblapack-dev', 'libhypre-2.4.0', 'libibverbs1', 'libibverbs-dev', 'libgfortran3', 'libblas-dev', 'libopenmpi1.3', 'libnuma1', 'libtorque2'] 0m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--purge', 'libhypre-dev'] 0m13.1s DUMP: dpkg: warning: ignoring request to remove libhypre-dev which isn't installed. 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--purge', 'libhypre-dev'] 0m13.1s INFO: Running scripts post_purge 0m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_purge_exceptions'] 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'tmp/scripts/post_purge_exceptions'] 0m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--purge', '--pending'] 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--purge', '--pending'] 0m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--remove', '--pending'] 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg', '--remove', '--pending'] 0m13.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m13.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m14.2s ERROR: WARN: Broken symlinks: /usr/lib/liblapack.a -> /etc/alternatives/liblapack.a /usr/lib/liblapack.so -> /etc/alternatives/liblapack.so /etc/alternatives/liblapack.a -> /usr/lib/lapack/liblapack.a /etc/alternatives/liblapack.so -> /usr/lib/lapack/liblapack.so /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf 0m14.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg-divert', '--list'] 0m14.2s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m14.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'dpkg-divert', '--list'] 0m14.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'clean'] 0m14.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'apt-get', 'clean'] 0m15.2s INFO: Warning: Package purging left files on system: /etc/alternatives/liblapack.a -> /usr/lib/lapack/liblapack.a not owned /etc/alternatives/liblapack.so -> /usr/lib/lapack/liblapack.so not owned /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf not owned /usr/lib/liblapack.a -> /etc/alternatives/liblapack.a not owned /usr/lib/liblapack.so -> /etc/alternatives/liblapack.so not owned These files seem to have been left by dependencies rather than by packages being explicitly tested. 0m15.2s INFO: PASS: Installation and purging test. 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'umount', '/proc'] 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpYfkLAl', 'umount', '/proc'] 0m15.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m15.5s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpYfkLAl'] 0m15.5s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpYfkLAl 0m15.5s INFO: PASS: All tests. 0m15.5s INFO: piuparts run ends. ret=0 End: 2014-03-16 17:48:45 UTC