Start: 2014-02-09 19:39:45 UTC Package: libopenmpi-dev Priority: extra Section: libdevel Installed-Size: 14088 Maintainer: Debian Open MPI Maintainers Architecture: amd64 Source: openmpi Version: 1.4.2-4 Replaces: openmpi-bin (<= 1.2.4-0), openmpi-dev Provides: openmpi-dev Depends: libc6 (>= 2.3.4), libopenmpi1.3 (= 1.4.2-4), openmpi-common (= 1.4.2-4), libibverbs-dev Conflicts: openmpi-dev Filename: pool/main/o/openmpi/libopenmpi-dev_1.4.2-4_amd64.deb Size: 2725948 MD5sum: 0e0276f7c8ac3c942c1867bde965ec32 SHA1: 6d3b0426d2e8a8f377d12859270f0702051dee16 SHA256: e7b2bd8ca75661ab2c11558f26cdab77cecf2c785aaad2cf0459d1674f217442 Description: high performance message passing library -- header files Open MPI is a project combining technologies and resources from several other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) in order to build the best MPI library available. A completely new MPI-2 compliant implementation, Open MPI offers advantages for system and software vendors, application developers and computer science researchers. . This package contains the header files and compiler wrappers which are needed to compile and link programs against libopenmpi. Homepage: http://www.open-mpi.org/ Tag: admin::cluster, devel::lang:c, field::mathematics, implemented-in::c, role::devel-lib, role::shared-lib Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 35m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt libopenmpi-dev=1.4.2-4 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at http://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.57~201402091830~0.56-34-g169d36e starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt libopenmpi-dev=1.4.2-4 0m0.0s INFO: Running on: Linux piu-slave-bm-a 3.2.0-4-amd64 #1 SMP Debian 3.2.54-2 x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp08mSfA 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp08mSfA 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp08mSfA', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.8s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp08mSfA', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ squeeze main 0m1.8s DEBUG: Created policy-rc.d and chmodded it. 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'update'] 0m1.8s DUMP: Hit http://mirror.bm.debian.org squeeze Release.gpg Ign http://mirror.bm.debian.org/debian/ squeeze/main Translation-en Hit http://mirror.bm.debian.org squeeze Release Hit http://mirror.bm.debian.org squeeze/main amd64 Packages Reading package lists... 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'update'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', '-yf', 'dist-upgrade'] 0m2.2s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', '-yf', 'dist-upgrade'] 0m2.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp08mSfA/tmp/scripts/ 0m2.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts-squeeze to /srv/piuparts.debian.org/tmp/tmp08mSfA/tmp/scripts/ 0m2.2s INFO: Running scripts post_setup 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_setup_experimental'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_setup_experimental'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_setup_forbid_home'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_setup_forbid_home'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m3.0s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (18.1 MB/s) Selecting previously deselected package adduser. (Reading database ... 6155 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'clean'] 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'clean'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--get-selections', '*'] 0m3.5s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install liblocale-gettext-perl install liblzma2 install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install ncurses-base install ncurses-bin install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--get-selections', '*'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg-divert', '--list'] 0m3.6s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash diversion of /bin/sh to /bin/sh.distrib by dash 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg-divert', '--list'] 0m3.6s INFO: apt-cache does not know about any of the requested packages 0m3.6s INFO: Running scripts pre_test 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_test_root_password'] 0m3.6s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_test_root_password'] 0m3.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m3.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m4.6s DEBUG: No broken symlinks as far as we can find. 0m4.6s INFO: Running scripts pre_install 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_install_database-server'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_install_database-server'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_install_exceptions'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_install_exceptions'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-cache', 'show', 'libopenmpi-dev=1.4.2-4'] 0m4.6s DUMP: Package: libopenmpi-dev Priority: extra Section: libdevel Installed-Size: 14088 Maintainer: Debian Open MPI Maintainers Architecture: amd64 Source: openmpi Version: 1.4.2-4 Replaces: openmpi-bin (<= 1.2.4-0), openmpi-dev Provides: openmpi-dev Depends: libc6 (>= 2.3.4), libopenmpi1.3 (= 1.4.2-4), openmpi-common (= 1.4.2-4), libibverbs-dev Conflicts: openmpi-dev Filename: pool/main/o/openmpi/libopenmpi-dev_1.4.2-4_amd64.deb Size: 2725948 MD5sum: 0e0276f7c8ac3c942c1867bde965ec32 SHA1: 6d3b0426d2e8a8f377d12859270f0702051dee16 SHA256: e7b2bd8ca75661ab2c11558f26cdab77cecf2c785aaad2cf0459d1674f217442 Description: high performance message passing library -- header files Open MPI is a project combining technologies and resources from several other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) in order to build the best MPI library available. A completely new MPI-2 compliant implementation, Open MPI offers advantages for system and software vendors, application developers and computer science researchers. . This package contains the header files and compiler wrappers which are needed to compile and link programs against libopenmpi. Homepage: http://www.open-mpi.org/ Tag: admin::cluster, devel::lang:c, field::mathematics, implemented-in::c, role::devel-lib, role::shared-lib 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-cache', 'show', 'libopenmpi-dev=1.4.2-4'] 0m4.6s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed Depends: libc6 (>= 2.3.4), libopenmpi1.3 (= 1.4.2-4), openmpi-common (= 1.4.2-4), libibverbs-dev 0m4.6s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpJ2_bCF/piuparts-depends-dummy'] 0m4.7s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmpJ2_bCF/piuparts-depends-dummy.deb'. 0m4.7s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpJ2_bCF/piuparts-depends-dummy'] 0m4.7s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmpJ2_bCF/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmp08mSfA/tmp 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m4.7s DUMP: Selecting previously deselected package piuparts-depends-dummy. (Reading database ... 6278 files and directories currently installed.) Unpacking piuparts-depends-dummy (from tmp/piuparts-depends-dummy.deb) ... dpkg: dependency problems prevent configuration of piuparts-depends-dummy: piuparts-depends-dummy depends on libopenmpi1.3 (= 1.4.2-4); however: Package libopenmpi1.3 is not installed. piuparts-depends-dummy depends on openmpi-common (= 1.4.2-4); however: Package openmpi-common is not installed. piuparts-depends-dummy depends on libibverbs-dev; however: Package libibverbs-dev is not installed. dpkg: error processing piuparts-depends-dummy (--install): dependency problems - leaving unconfigured Errors were encountered while processing: piuparts-depends-dummy 0m4.7s DEBUG: Command failed (status=1), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', '-yf', 'install'] 0m5.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Correcting dependencies... Done The following extra packages will be installed: libgfortran3 libibverbs-dev libibverbs1 libnuma1 libopenmpi1.3 libtorque2 openmpi-common The following NEW packages will be installed: libgfortran3 libibverbs-dev libibverbs1 libnuma1 libopenmpi1.3 libtorque2 openmpi-common 0 upgraded, 7 newly installed, 0 to remove and 0 not upgraded. 1 not fully installed or removed. Need to get 2040 kB of archives. After this operation, 6386 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libgfortran3 amd64 4.4.5-8 [291 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main libibverbs1 amd64 1.1.3-2 [33.7 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main libnuma1 amd64 2.0.5-1 [26.7 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main libtorque2 amd64 2.4.8+dfsg-9squeeze2 [115 kB] Get:5 http://mirror.bm.debian.org/debian/ squeeze/main libopenmpi1.3 amd64 1.4.2-4 [1400 kB] Get:6 http://mirror.bm.debian.org/debian/ squeeze/main openmpi-common all 1.4.2-4 [89.5 kB] Get:7 http://mirror.bm.debian.org/debian/ squeeze/main libibverbs-dev amd64 1.1.3-2 [83.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2040 kB in 0s (6033 kB/s) Selecting previously deselected package libgfortran3. (Reading database ... 6278 files and directories currently installed.) Unpacking libgfortran3 (from .../libgfortran3_4.4.5-8_amd64.deb) ... Selecting previously deselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.3-2_amd64.deb) ... Selecting previously deselected package libnuma1. Unpacking libnuma1 (from .../libnuma1_2.0.5-1_amd64.deb) ... Selecting previously deselected package libtorque2. Unpacking libtorque2 (from .../libtorque2_2.4.8+dfsg-9squeeze2_amd64.deb) ... Selecting previously deselected package libopenmpi1.3. Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.2-4_amd64.deb) ... Selecting previously deselected package openmpi-common. Unpacking openmpi-common (from .../openmpi-common_1.4.2-4_all.deb) ... Selecting previously deselected package libibverbs-dev. Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.3-2_amd64.deb) ... Setting up libgfortran3 (4.4.5-8) ... Setting up libibverbs1 (1.1.3-2) ... Setting up libnuma1 (2.0.5-1) ... Setting up libtorque2 (2.4.8+dfsg-9squeeze2) ... Setting up libopenmpi1.3 (1.4.2-4) ... Setting up openmpi-common (1.4.2-4) ... Setting up libibverbs-dev (1.1.3-2) ... Setting up piuparts-depends-dummy (0.invalid.0) ... 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', '-yf', 'install'] 0m5.9s INFO: Installation of ['tmp/piuparts-depends-dummy.deb'] ok 0m5.9s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmp08mSfA/tmp/piuparts-depends-dummy.deb 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m5.9s DUMP: piuparts-depends-dummy install ok installed 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m5.9s DUMP: (Reading database ... 6564 files and directories currently installed.) Removing piuparts-depends-dummy ... 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'clean'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'clean'] 0m6.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m6.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m7.5s DEBUG: No broken symlinks as far as we can find. 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-cache', 'policy'] 0m7.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages release v=6.0.8,o=Debian,a=oldstable,n=squeeze,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-cache', 'policy'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-cache', 'policy', 'libopenmpi-dev'] 0m7.6s DUMP: libopenmpi-dev: Installed: (none) Candidate: 1.4.2-4 Version table: 1.4.2-4 0 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages 0m7.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-cache', 'policy', 'libopenmpi-dev'] 0m7.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', '-y', 'install', 'libopenmpi-dev=1.4.2-4'] 0m8.4s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libopenmpi-dev 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 2726 kB of archives. After this operation, 14.4 MB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libopenmpi-dev amd64 1.4.2-4 [2726 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2726 kB in 0s (28.6 MB/s) Selecting previously deselected package libopenmpi-dev. (Reading database ... 6564 files and directories currently installed.) Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.4.2-4_amd64.deb) ... Setting up libopenmpi-dev (1.4.2-4) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode. 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', '-y', 'install', 'libopenmpi-dev=1.4.2-4'] 0m8.4s INFO: Running scripts post_install 0m8.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m8.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m9.6s DEBUG: No broken symlinks as far as we can find. 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--get-selections', '*'] 0m9.6s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install libgfortran3 install libibverbs-dev install libibverbs1 install liblocale-gettext-perl install liblzma2 install libncurses5 install libnuma1 install libopenmpi-dev install libopenmpi1.3 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libtorque2 install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install ncurses-base install ncurses-bin install openmpi-common install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--get-selections', '*'] 0m10.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp08mSfA', '-ac'] 0m10.9s DUMP: debsums: no md5sums for mawk 0m10.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp08mSfA', '-ac'] 0m10.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m10.9s DUMP: 0.11.3~bpo70+1 0m10.9s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m10.9s INFO: Running adequate version 0.11.3~bpo70+1 now. 0m10.9s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'libopenmpi-dev'] 0m11.0s DUMP: libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_rml libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_list_t_class libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_process_info libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_object_t_class libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_list_item_t_class libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_errmgr_base_log libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_progress_event_users_decrement libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_strncpy libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_show_help libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_progress_event_users_increment libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_util_compare_name_fields libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_class_initialize libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_testall_ libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_waitall_ libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_testsome_ libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_waitsome_ libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_comm_spawn_multiple_ 0m11.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'libopenmpi-dev'] 0m11.0s ERROR: WARN: Inadequate results from running adequate! libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_rml libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_list_t_class libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_process_info libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_object_t_class libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_list_item_t_class libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_errmgr_base_log libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_progress_event_users_decrement libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_strncpy libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_show_help libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_progress_event_users_increment libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => orte_util_compare_name_fields libopenmpi-dev: undefined-symbol /usr/lib/libmca_common_sm.so => opal_class_initialize libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_testall_ libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_waitall_ libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_testsome_ libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_waitsome_ libopenmpi-dev: undefined-symbol /usr/lib/libmpi_f90.so => mpi_comm_spawn_multiple_ 0m11.0s ERROR: WARN: Running adequate resulted in inadequate tags found: undefined-symbol 0m11.0s INFO: Running scripts pre_remove 0m11.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_exceptions'] 0m11.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/pre_remove_exceptions'] 0m11.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'remove', 'libibverbs1', 'openmpi-common', 'libopenmpi1.3', 'libibverbs-dev', 'libgfortran3', 'libnuma1', 'libtorque2', 'libopenmpi-dev'] 0m11.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libgfortran3 libibverbs-dev libibverbs1 libnuma1 libopenmpi-dev libopenmpi1.3 libtorque2 openmpi-common 0 upgraded, 0 newly installed, 8 to remove and 0 not upgraded. After this operation, 20.8 MB disk space will be freed. (Reading database ... 7115 files and directories currently installed.) Removing libopenmpi-dev ... Removing libopenmpi1.3 ... Removing libgfortran3 ... Removing libibverbs-dev ... Removing libibverbs1 ... Removing libnuma1 ... Removing libtorque2 ... Removing openmpi-common ... 0m11.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'remove', 'libibverbs1', 'openmpi-common', 'libopenmpi1.3', 'libibverbs-dev', 'libgfortran3', 'libnuma1', 'libtorque2', 'libopenmpi-dev'] 0m11.9s INFO: Running scripts post_remove 0m11.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_remove_exceptions_lenny'] 0m11.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_remove_exceptions_lenny'] 0m11.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--purge', 'libibverbs1', 'openmpi-common', 'libopenmpi1.3', 'libibverbs-dev', 'libgfortran3', 'libnuma1', 'libtorque2'] 0m12.0s DUMP: (Reading database ... 6278 files and directories currently installed.) Removing libibverbs1 ... Purging configuration files for libibverbs1 ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed. Removing libopenmpi1.3 ... Purging configuration files for libopenmpi1.3 ... dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed. Removing libgfortran3 ... Purging configuration files for libgfortran3 ... Removing libnuma1 ... Purging configuration files for libnuma1 ... Removing libtorque2 ... Purging configuration files for libtorque2 ... 0m12.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--purge', 'libibverbs1', 'openmpi-common', 'libopenmpi1.3', 'libibverbs-dev', 'libgfortran3', 'libnuma1', 'libtorque2'] 0m12.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--purge', 'libopenmpi-dev'] 0m12.0s DUMP: dpkg: warning: ignoring request to remove libopenmpi-dev which isn't installed. 0m12.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--purge', 'libopenmpi-dev'] 0m12.0s INFO: Running scripts post_purge 0m12.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_purge_exceptions'] 0m12.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'tmp/scripts/post_purge_exceptions'] 0m12.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--purge', '--pending'] 0m12.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--purge', '--pending'] 0m12.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--remove', '--pending'] 0m12.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg', '--remove', '--pending'] 0m12.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m12.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m13.1s DEBUG: No broken symlinks as far as we can find. 0m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg-divert', '--list'] 0m13.1s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash diversion of /bin/sh to /bin/sh.distrib by dash 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'dpkg-divert', '--list'] 0m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'clean'] 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'apt-get', 'clean'] 0m14.1s INFO: PASS: Installation and purging test. 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'umount', '/proc'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp08mSfA', 'umount', '/proc'] 0m14.3s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m14.4s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp08mSfA'] 0m14.4s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp08mSfA 0m14.4s INFO: PASS: All tests. 0m14.4s INFO: piuparts run ends. ret=0 End: 2014-02-09 19:40:00 UTC