Start: 2014-03-12 15:32:10 UTC Package: python-petsc4py Priority: extra Section: python Installed-Size: 3244 Maintainer: Debian Python Modules Team Architecture: amd64 Source: petsc4py Version: 1.1-2 Replaces: python-petsc Provides: python2.5-petsc4py, python2.6-petsc4py Depends: python (<< 2.7), python (>= 2.5), python-numpy (<< 1:1.5), python-numpy (>= 1:1.4.1), python-support (>= 0.90.0), libamd2.2.0 (>= 1:3.4.0), libblas3gf | libblas.so.3gf | libatlas3gf-base, libc6 (>= 2.2.5), libgcc1 (>= 1:4.1.1), libgfortran3 (>= 4.3), libhdf5-openmpi-1.8.4, libhypre-2.4.0, liblapack3gf | liblapack.so.3gf | libatlas3gf-base, libopenmpi1.3, libpetsc3.1, libscotch-5.1, libspooles2.2, libstdc++6 (>= 4.1.1), libumfpack5.4.0 (>= 1:3.4.0), libx11-6, zlib1g (>= 1:1.1.4) Conflicts: python-petsc Filename: pool/main/p/petsc4py/python-petsc4py_1.1-2_amd64.deb Size: 1010048 MD5sum: c2d06c328db2dac7bb48e4400e12c780 SHA1: a4b0e6eecae399728ca96b4b462f7b8a278b6487 SHA256: 96f3c85483af0c300d0199b3cfb731e97526a4cb7ec904dc971ec4cad38089d5 Description: Python bindings for PETSc libraries PETSc is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI standard for all message-passing communication. . This package provides Python bindings to almost all functions of PETSc. Homepage: http://code.google.com/p/petsc4py/ Python-Version: 2.5, 2.6 Tag: qa::low-popcon Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 35m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt python-petsc4py=1.1-2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at http://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.57.1~201403012113~0.57-23-gfd8571c starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt python-petsc4py=1.1-2 0m0.0s INFO: Running on: Linux piu-slave-bm-a 3.2.0-4-amd64 #1 SMP Debian 3.2.54-2 x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpvf3jxd 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpvf3jxd 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.7s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ squeeze main 0m1.8s DEBUG: Created policy-rc.d and chmodded it. 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'update'] 0m3.5s DUMP: Get:1 http://mirror.bm.debian.org squeeze Release.gpg [1672 B] Ign http://mirror.bm.debian.org/debian/ squeeze/main Translation-en Get:2 http://mirror.bm.debian.org squeeze Release [96.0 kB] Get:3 http://mirror.bm.debian.org squeeze/main amd64 Packages [8388 kB] Fetched 8486 kB in 0s (9046 kB/s) Reading package lists... 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'update'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', '-yf', 'dist-upgrade'] 0m4.7s DUMP: Reading package lists... Building dependency tree... The following packages will be upgraded: base-files gnupg gpgv tzdata 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 3067 kB of archives. After this operation, 52.2 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main base-files amd64 6.0squeeze9 [76.1 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main gpgv amd64 1.4.10-4+squeeze4 [222 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main gnupg amd64 1.4.10-4+squeeze4 [2148 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main tzdata all 2013i-0squeeze1 [621 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3067 kB in 0s (33.0 MB/s) (Reading database ... 6155 files and directories currently installed.) Preparing to replace base-files 6.0squeeze8 (using .../base-files_6.0squeeze9_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.0squeeze9) ... Installing new version of config file /etc/debian_version ... (Reading database ... 6155 files and directories currently installed.) Preparing to replace gpgv 1.4.10-4+squeeze3 (using .../gpgv_1.4.10-4+squeeze4_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.10-4+squeeze4) ... (Reading database ... 6155 files and directories currently installed.) Preparing to replace gnupg 1.4.10-4+squeeze3 (using .../gnupg_1.4.10-4+squeeze4_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.10-4+squeeze4) ... (Reading database ... 6155 files and directories currently installed.) Preparing to replace tzdata 2013d-0squeeze1 (using .../tzdata_2013i-0squeeze1_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2013i-0squeeze1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Mar 12 15:32:14 UTC 2014. Universal Time is now: Wed Mar 12 15:32:14 UTC 2014. Run 'dpkg-reconfigure tzdata' if you wish to change it. 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', '-yf', 'dist-upgrade'] 0m4.7s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpvf3jxd/tmp/scripts/ 0m4.7s DEBUG: Copying scriptsdir /etc/piuparts/scripts-squeeze to /srv/piuparts.debian.org/tmp/tmpvf3jxd/tmp/scripts/ 0m4.7s INFO: Running scripts post_setup 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_experimental'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_experimental'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_forbid_home'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_forbid_home'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.8s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' `/bin/sync' -> `true' 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m5.6s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Reading state information... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (22.8 MB/s) Selecting previously deselected package adduser. (Reading database ... 6135 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'clean'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'clean'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--get-selections', '*'] 0m6.2s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install liblocale-gettext-perl install liblzma2 install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install ncurses-base install ncurses-bin install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--get-selections', '*'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg-divert', '--list'] 0m6.2s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg-divert', '--list'] 0m6.2s INFO: apt-cache does not know about any of the requested packages 0m6.2s INFO: Running scripts pre_test 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_test_root_password'] 0m6.2s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_test_root_password'] 0m6.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m6.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m7.2s DEBUG: No broken symlinks as far as we can find. 0m7.2s INFO: Running scripts pre_install 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_install_database-server'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_install_database-server'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_install_exceptions'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_install_exceptions'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_install_extras'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_install_extras'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-cache', 'show', 'python-petsc4py=1.1-2'] 0m7.3s DUMP: Package: python-petsc4py Priority: extra Section: python Installed-Size: 3244 Maintainer: Debian Python Modules Team Architecture: amd64 Source: petsc4py Version: 1.1-2 Replaces: python-petsc Provides: python2.5-petsc4py, python2.6-petsc4py Depends: python (<< 2.7), python (>= 2.5), python-numpy (<< 1:1.5), python-numpy (>= 1:1.4.1), python-support (>= 0.90.0), libamd2.2.0 (>= 1:3.4.0), libblas3gf | libblas.so.3gf | libatlas3gf-base, libc6 (>= 2.2.5), libgcc1 (>= 1:4.1.1), libgfortran3 (>= 4.3), libhdf5-openmpi-1.8.4, libhypre-2.4.0, liblapack3gf | liblapack.so.3gf | libatlas3gf-base, libopenmpi1.3, libpetsc3.1, libscotch-5.1, libspooles2.2, libstdc++6 (>= 4.1.1), libumfpack5.4.0 (>= 1:3.4.0), libx11-6, zlib1g (>= 1:1.1.4) Conflicts: python-petsc Filename: pool/main/p/petsc4py/python-petsc4py_1.1-2_amd64.deb Size: 1010048 MD5sum: c2d06c328db2dac7bb48e4400e12c780 SHA1: a4b0e6eecae399728ca96b4b462f7b8a278b6487 SHA256: 96f3c85483af0c300d0199b3cfb731e97526a4cb7ec904dc971ec4cad38089d5 Description: Python bindings for PETSc libraries PETSc is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI standard for all message-passing communication. . This package provides Python bindings to almost all functions of PETSc. Homepage: http://code.google.com/p/petsc4py/ Python-Version: 2.5, 2.6 Tag: qa::low-popcon 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-cache', 'show', 'python-petsc4py=1.1-2'] 0m7.3s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed Depends: python (<< 2.7), python (>= 2.5), python-numpy (<< 1:1.5), python-numpy (>= 1:1.4.1), python-support (>= 0.90.0), libamd2.2.0 (>= 1:3.4.0), libblas3gf | libblas.so.3gf | libatlas3gf-base, libc6 (>= 2.2.5), libgcc1 (>= 1:4.1.1), libgfortran3 (>= 4.3), libhdf5-openmpi-1.8.4, libhypre-2.4.0, liblapack3gf | liblapack.so.3gf | libatlas3gf-base, libopenmpi1.3, libpetsc3.1, libscotch-5.1, libspooles2.2, libstdc++6 (>= 4.1.1), libumfpack5.4.0 (>= 1:3.4.0), libx11-6, zlib1g (>= 1:1.1.4) Conflicts: python-petsc 0m7.3s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpp7qSdk/piuparts-depends-dummy'] 0m7.3s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmpp7qSdk/piuparts-depends-dummy.deb'. 0m7.3s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpp7qSdk/piuparts-depends-dummy'] 0m7.3s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmpp7qSdk/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmpvf3jxd/tmp 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m7.4s DUMP: Selecting previously deselected package piuparts-depends-dummy. (Reading database ... 6258 files and directories currently installed.) Unpacking piuparts-depends-dummy (from tmp/piuparts-depends-dummy.deb) ... dpkg: dependency problems prevent configuration of piuparts-depends-dummy: piuparts-depends-dummy depends on python (<< 2.7); however: Package python is not installed. piuparts-depends-dummy depends on python (>= 2.5); however: Package python is not installed. piuparts-depends-dummy depends on python-numpy (<< 1:1.5); however: Package python-numpy is not installed. piuparts-depends-dummy depends on python-numpy (>= 1:1.4.1); however: Package python-numpy is not installed. piuparts-depends-dummy depends on python-support (>= 0.90.0); however: Package python-support is not installed. piuparts-depends-dummy depends on libamd2.2.0 (>= 1:3.4.0); however: Package libamd2.2.0 is not installed. piuparts-depends-dummy depends on libblas3gf | libblas.so.3gf | libatlas3gf-base; however: Package libblas3gf is not installed. Package libblas.so.3gf is not installed. Package libatlas3gf-base is not installed. piuparts-depends-dummy depends on libgfortran3 (>= 4.3); however: Package libgfortran3 is not installed. piuparts-depends-dummy depends on libhdf5-openmpi-1.8.4; however: Package libhdf5-openmpi-1.8.4 is not installed. piuparts-depends-dummy depends on libhypre-2.4.0; however: Package libhypre-2.4.0 is not installed. piuparts-depends-dummy depends on liblapack3gf | liblapack.so.3gf | libatlas3gf-base; however: Package liblapack3gf is not installed. Package liblapack.so.3gf is not installed. Package libatlas3gf-base is not installed. piuparts-depends-dummy depends on libopenmpi1.3; however: Package libopenmpi1.3 is not installed. piuparts-depends-dummy depends on libpetsc3.1; however: Package libpetsc3.1 is not installed. piuparts-depends-dummy depends on libscotch-5.1; however: Package libscotch-5.1 is not installed. piuparts-depends-dummy depends on libspooles2.2; however: Package libspooles2.2 is not installed. piuparts-depends-dummy depends on libumfpack5.4.0 (>= 1:3.4.0); however: Package libumfpack5.4.0 is not installed. piuparts-depends-dummy depends on libx11-6; however: Package libx11-6 is not installed. dpkg: error processing piuparts-depends-dummy (--install): dependency problems - leaving unconfigured Errors were encountered while processing: piuparts-depends-dummy 0m7.4s DEBUG: Command failed (status=1), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', '-yf', 'install'] 0m15.2s DUMP: Reading package lists... Building dependency tree... Reading state information... Correcting dependencies... Done The following extra packages will be installed: libamd2.2.0 libblas3gf libexpat1 libgfortran3 libhdf5-openmpi-1.8.4 libhypre-2.4.0 libibverbs1 liblapack3gf libncursesw5 libnuma1 libopenmpi1.3 libpetsc3.1 libscotch-5.1 libspooles2.2 libsqlite3-0 libssl0.9.8 libsuperlu3 libtorque2 libumfpack5.4.0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 mime-support openmpi-bin openmpi-common python python-minimal python-numpy python-support python2.6 python2.6-minimal Suggested packages: gfortran python-doc python-tk python-profiler python-numpy-doc python-numpy-dbg python-nose python-dev python2.6-doc python2.6-profiler binutils binfmt-support Recommended packages: libgpm2 file openmpi-checkpoint The following NEW packages will be installed: libamd2.2.0 libblas3gf libexpat1 libgfortran3 libhdf5-openmpi-1.8.4 libhypre-2.4.0 libibverbs1 liblapack3gf libncursesw5 libnuma1 libopenmpi1.3 libpetsc3.1 libscotch-5.1 libspooles2.2 libsqlite3-0 libssl0.9.8 libsuperlu3 libtorque2 libumfpack5.4.0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 mime-support openmpi-bin openmpi-common python python-minimal python-numpy python-support python2.6 python2.6-minimal 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded. 1 not fully installed or removed. Need to get 22.8 MB of archives. After this operation, 68.0 MB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libssl0.9.8 amd64 0.9.8o-4squeeze14 [1002 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main python2.6-minimal amd64 2.6.6-8+b1 [1520 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main mime-support all 3.48-1 [34.2 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main libexpat1 amd64 2.0.1-7+squeeze1 [138 kB] Get:5 http://mirror.bm.debian.org/debian/ squeeze/main libncursesw5 amd64 5.7+20100313-5 [390 kB] Get:6 http://mirror.bm.debian.org/debian/ squeeze/main libsqlite3-0 amd64 3.7.3-1 [397 kB] Get:7 http://mirror.bm.debian.org/debian/ squeeze/main python2.6 amd64 2.6.6-8+b1 [2455 kB] Get:8 http://mirror.bm.debian.org/debian/ squeeze/main python-minimal all 2.6.6-3+squeeze7 [33.8 kB] Get:9 http://mirror.bm.debian.org/debian/ squeeze/main python all 2.6.6-3+squeeze7 [169 kB] Get:10 http://mirror.bm.debian.org/debian/ squeeze/main python-support all 1.0.10 [33.0 kB] Get:11 http://mirror.bm.debian.org/debian/ squeeze/main libgfortran3 amd64 4.4.5-8 [291 kB] Get:12 http://mirror.bm.debian.org/debian/ squeeze/main libblas3gf amd64 1.2-8 [229 kB] Get:13 http://mirror.bm.debian.org/debian/ squeeze/main liblapack3gf amd64 3.2.1-8 [4434 kB] Get:14 http://mirror.bm.debian.org/debian/ squeeze/main python-numpy amd64 1:1.4.1-5 [2080 kB] Get:15 http://mirror.bm.debian.org/debian/ squeeze/main libamd2.2.0 amd64 1:3.4.0-2 [29.2 kB] Get:16 http://mirror.bm.debian.org/debian/ squeeze/main libibverbs1 amd64 1.1.3-2 [33.7 kB] Get:17 http://mirror.bm.debian.org/debian/ squeeze/main libnuma1 amd64 2.0.5-1 [26.7 kB] Get:18 http://mirror.bm.debian.org/debian/ squeeze/main libtorque2 amd64 2.4.8+dfsg-9squeeze3 [115 kB] Get:19 http://mirror.bm.debian.org/debian/ squeeze/main libopenmpi1.3 amd64 1.4.2-4 [1400 kB] Get:20 http://mirror.bm.debian.org/debian/ squeeze/main libhdf5-openmpi-1.8.4 amd64 1.8.4-patch1-2 [1357 kB] Get:21 http://mirror.bm.debian.org/debian/ squeeze/main libsuperlu3 amd64 3.0+20070106-3 [170 kB] Get:22 http://mirror.bm.debian.org/debian/ squeeze/main libhypre-2.4.0 amd64 2.4.0b-7 [1752 kB] Get:23 http://mirror.bm.debian.org/debian/ squeeze/main libscotch-5.1 amd64 5.1.8a.dfsg-2 [198 kB] Get:24 http://mirror.bm.debian.org/debian/ squeeze/main libspooles2.2 amd64 2.2-8 [566 kB] Get:25 http://mirror.bm.debian.org/debian/ squeeze/main libumfpack5.4.0 amd64 1:3.4.0-2 [388 kB] Get:26 http://mirror.bm.debian.org/debian/ squeeze/main libxau6 amd64 1:1.0.6-1 [16.8 kB] Get:27 http://mirror.bm.debian.org/debian/ squeeze/main libxdmcp6 amd64 1:1.0.3-2 [19.3 kB] Get:28 http://mirror.bm.debian.org/debian/ squeeze/main libxcb1 amd64 1.6-1+squeeze1 [44.3 kB] Get:29 http://mirror.bm.debian.org/debian/ squeeze/main libx11-data all 2:1.3.3-4+squeeze1 [184 kB] Get:30 http://mirror.bm.debian.org/debian/ squeeze/main libx11-6 amd64 2:1.3.3-4+squeeze1 [847 kB] Get:31 http://mirror.bm.debian.org/debian/ squeeze/main openmpi-common all 1.4.2-4 [89.5 kB] Get:32 http://mirror.bm.debian.org/debian/ squeeze/main openmpi-bin amd64 1.4.2-4 [165 kB] Get:33 http://mirror.bm.debian.org/debian/ squeeze/main libpetsc3.1 amd64 3.1.dfsg-7 [2192 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 22.8 MB in 1s (11.6 MB/s) Selecting previously deselected package libssl0.9.8. (Reading database ... 6258 files and directories currently installed.) Unpacking libssl0.9.8 (from .../libssl0.9.8_0.9.8o-4squeeze14_amd64.deb) ... Selecting previously deselected package python2.6-minimal. Unpacking python2.6-minimal (from .../python2.6-minimal_2.6.6-8+b1_amd64.deb) ... Selecting previously deselected package mime-support. Unpacking mime-support (from .../mime-support_3.48-1_all.deb) ... Selecting previously deselected package libexpat1. Unpacking libexpat1 (from .../libexpat1_2.0.1-7+squeeze1_amd64.deb) ... Selecting previously deselected package libncursesw5. Unpacking libncursesw5 (from .../libncursesw5_5.7+20100313-5_amd64.deb) ... Selecting previously deselected package libsqlite3-0. Unpacking libsqlite3-0 (from .../libsqlite3-0_3.7.3-1_amd64.deb) ... Selecting previously deselected package python2.6. Unpacking python2.6 (from .../python2.6_2.6.6-8+b1_amd64.deb) ... Selecting previously deselected package python-minimal. Unpacking python-minimal (from .../python-minimal_2.6.6-3+squeeze7_all.deb) ... Selecting previously deselected package python. Unpacking python (from .../python_2.6.6-3+squeeze7_all.deb) ... Selecting previously deselected package python-support. Unpacking python-support (from .../python-support_1.0.10_all.deb) ... Selecting previously deselected package libgfortran3. Unpacking libgfortran3 (from .../libgfortran3_4.4.5-8_amd64.deb) ... Selecting previously deselected package libblas3gf. Unpacking libblas3gf (from .../libblas3gf_1.2-8_amd64.deb) ... Selecting previously deselected package liblapack3gf. Unpacking liblapack3gf (from .../liblapack3gf_3.2.1-8_amd64.deb) ... Selecting previously deselected package python-numpy. Unpacking python-numpy (from .../python-numpy_1%3a1.4.1-5_amd64.deb) ... Selecting previously deselected package libamd2.2.0. Unpacking libamd2.2.0 (from .../libamd2.2.0_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.3-2_amd64.deb) ... Selecting previously deselected package libnuma1. Unpacking libnuma1 (from .../libnuma1_2.0.5-1_amd64.deb) ... Selecting previously deselected package libtorque2. Unpacking libtorque2 (from .../libtorque2_2.4.8+dfsg-9squeeze3_amd64.deb) ... Selecting previously deselected package libopenmpi1.3. Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.2-4_amd64.deb) ... Selecting previously deselected package libhdf5-openmpi-1.8.4. Unpacking libhdf5-openmpi-1.8.4 (from .../libhdf5-openmpi-1.8.4_1.8.4-patch1-2_amd64.deb) ... Selecting previously deselected package libsuperlu3. Unpacking libsuperlu3 (from .../libsuperlu3_3.0+20070106-3_amd64.deb) ... Selecting previously deselected package libhypre-2.4.0. Unpacking libhypre-2.4.0 (from .../libhypre-2.4.0_2.4.0b-7_amd64.deb) ... Selecting previously deselected package libscotch-5.1. Unpacking libscotch-5.1 (from .../libscotch-5.1_5.1.8a.dfsg-2_amd64.deb) ... Selecting previously deselected package libspooles2.2. Unpacking libspooles2.2 (from .../libspooles2.2_2.2-8_amd64.deb) ... Selecting previously deselected package libumfpack5.4.0. Unpacking libumfpack5.4.0 (from .../libumfpack5.4.0_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.6-1_amd64.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.3-2_amd64.deb) ... Selecting previously deselected package libxcb1. Unpacking libxcb1 (from .../libxcb1_1.6-1+squeeze1_amd64.deb) ... Selecting previously deselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.3.3-4+squeeze1_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.3.3-4+squeeze1_amd64.deb) ... Selecting previously deselected package openmpi-common. Unpacking openmpi-common (from .../openmpi-common_1.4.2-4_all.deb) ... Selecting previously deselected package openmpi-bin. Unpacking openmpi-bin (from .../openmpi-bin_1.4.2-4_amd64.deb) ... Selecting previously deselected package libpetsc3.1. Unpacking libpetsc3.1 (from .../libpetsc3.1_3.1.dfsg-7_amd64.deb) ... Setting up libssl0.9.8 (0.9.8o-4squeeze14) ... Setting up python2.6-minimal (2.6.6-8+b1) ... Setting up mime-support (3.48-1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode. Setting up libexpat1 (2.0.1-7+squeeze1) ... Setting up libncursesw5 (5.7+20100313-5) ... Setting up libsqlite3-0 (3.7.3-1) ... Setting up python2.6 (2.6.6-8+b1) ... Setting up python-minimal (2.6.6-3+squeeze7) ... Setting up python (2.6.6-3+squeeze7) ... Setting up python-support (1.0.10) ... Setting up libgfortran3 (4.4.5-8) ... Setting up libblas3gf (1.2-8) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up liblapack3gf (3.2.1-8) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up python-numpy (1:1.4.1-5) ... Setting up libamd2.2.0 (1:3.4.0-2) ... Setting up libibverbs1 (1.1.3-2) ... Setting up libnuma1 (2.0.5-1) ... Setting up libtorque2 (2.4.8+dfsg-9squeeze3) ... Setting up libopenmpi1.3 (1.4.2-4) ... Setting up libhdf5-openmpi-1.8.4 (1.8.4-patch1-2) ... Setting up libsuperlu3 (3.0+20070106-3) ... Setting up libhypre-2.4.0 (2.4.0b-7) ... Setting up libscotch-5.1 (5.1.8a.dfsg-2) ... Setting up libspooles2.2 (2.2-8) ... Setting up libumfpack5.4.0 (1:3.4.0-2) ... Setting up libxau6 (1:1.0.6-1) ... Setting up libxdmcp6 (1:1.0.3-2) ... Setting up libxcb1 (1.6-1+squeeze1) ... Setting up libx11-data (2:1.3.3-4+squeeze1) ... Setting up libx11-6 (2:1.3.3-4+squeeze1) ... Setting up openmpi-common (1.4.2-4) ... Setting up openmpi-bin (1.4.2-4) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode. Setting up libpetsc3.1 (3.1.dfsg-7) ... Setting up piuparts-depends-dummy (0.invalid.0) ... Processing triggers for python-support ... 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', '-yf', 'install'] 0m15.2s INFO: Installation of ['tmp/piuparts-depends-dummy.deb'] ok 0m15.2s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmpvf3jxd/tmp/piuparts-depends-dummy.deb 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m15.2s DUMP: piuparts-depends-dummy install ok installed 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m15.2s DUMP: (Reading database ... 8228 files and directories currently installed.) Removing piuparts-depends-dummy ... 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'clean'] 0m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'clean'] 0m15.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m16.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m17.5s ERROR: WARN: Broken symlinks: /usr/include/python2.5/numpy -> ../../lib/pymodules/python2.5/numpy/core/include/numpy /usr/include/python2.5_d/numpy -> ../../lib/pymodules/python2.5/numpy/core/include/numpy /usr/lib/python2.4/site-packages/python-support.pth -> ../../pymodules/python2.4/.path /usr/lib/python2.5/site-packages/python-support.pth -> ../../pymodules/python2.5/.path 0m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-cache', 'policy'] 0m17.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages release v=6.0.9,o=Debian,a=oldstable,n=squeeze,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 0m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-cache', 'policy'] 0m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-cache', 'policy', 'python-petsc4py'] 0m17.5s DUMP: python-petsc4py: Installed: (none) Candidate: 1.1-2 Version table: 1.1-2 0 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages 0m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-cache', 'policy', 'python-petsc4py'] 0m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', '-y', 'install', 'python-petsc4py=1.1-2'] 0m18.4s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: python-petsc4py 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 1010 kB of archives. After this operation, 3322 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main python-petsc4py amd64 1.1-2 [1010 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1010 kB in 0s (7928 kB/s) Selecting previously deselected package python-petsc4py. (Reading database ... 8228 files and directories currently installed.) Unpacking python-petsc4py (from .../python-petsc4py_1.1-2_amd64.deb) ... Setting up python-petsc4py (1.1-2) ... Processing triggers for python-support ... 0m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', '-y', 'install', 'python-petsc4py=1.1-2'] 0m18.4s INFO: Running scripts post_install 0m18.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m18.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m19.9s ERROR: WARN: Broken symlinks: /usr/include/python2.5/numpy -> ../../lib/pymodules/python2.5/numpy/core/include/numpy /usr/include/python2.5_d/numpy -> ../../lib/pymodules/python2.5/numpy/core/include/numpy /usr/lib/python2.4/site-packages/python-support.pth -> ../../pymodules/python2.4/.path /usr/lib/python2.5/site-packages/python-support.pth -> ../../pymodules/python2.5/.path 0m20.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--get-selections', '*'] 0m20.0s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libamd2.2.0 install libattr1 install libblas3gf install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libexpat1 install libgcc1 install libgfortran3 install libhdf5-openmpi-1.8.4 install libhypre-2.4.0 install libibverbs1 install liblapack3gf install liblocale-gettext-perl install liblzma2 install libncurses5 install libncursesw5 install libnuma1 install libopenmpi1.3 install libpam-modules install libpam-runtime install libpam0g install libpetsc3.1 install libreadline6 install libscotch-5.1 install libselinux1 install libsepol1 install libslang2 install libspooles2.2 install libsqlite3-0 install libss2 install libssl0.9.8 install libstdc++6 install libsuperlu3 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libtorque2 install libumfpack5.4.0 install libusb-0.1-4 install libuuid1 install libx11-6 install libx11-data install libxau6 install libxcb1 install libxdmcp6 install login install lsb-base install mawk install mime-support install mount install ncurses-base install ncurses-bin install openmpi-bin install openmpi-common install passwd install perl-base install python install python-minimal install python-numpy install python-petsc4py install python-support install python2.6 install python2.6-minimal install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--get-selections', '*'] 0m20.7s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', '-ac'] 0m21.5s DUMP: debsums: no md5sums for mawk 0m21.5s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', '-ac'] 0m21.5s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m21.6s DUMP: 0.11.3~bpo70+1 0m21.6s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m21.6s INFO: Running adequate version 0.11.3~bpo70+1 now. 0m21.6s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'python-petsc4py'] 0m21.7s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'python-petsc4py'] 0m21.7s INFO: Running scripts pre_remove 0m21.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m21.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m21.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m21.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m21.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_exceptions'] 0m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/pre_remove_exceptions'] 0m21.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'remove', 'libx11-data', 'libumfpack5.4.0', 'libxcb1', 'libamd2.2.0', 'python-support', 'libnuma1', 'libncursesw5', 'libblas3gf', 'libhypre-2.4.0', 'openmpi-common', 'libopenmpi1.3', 'libsqlite3-0', 'libgfortran3', 'libxau6', 'libssl0.9.8', 'libx11-6', 'python', 'openmpi-bin', 'python-numpy', 'python2.6', 'libspooles2.2', 'libtorque2', 'mime-support', 'python-minimal', 'libscotch-5.1', 'liblapack3gf', 'python2.6-minimal', 'libibverbs1', 'libpetsc3.1', 'libhdf5-openmpi-1.8.4', 'libsuperlu3', 'libexpat1', 'libxdmcp6', 'python-petsc4py'] 0m22.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libamd2.2.0 libblas3gf libexpat1 libgfortran3 libhdf5-openmpi-1.8.4 libhypre-2.4.0 libibverbs1 liblapack3gf libncursesw5 libnuma1 libopenmpi1.3 libpetsc3.1 libscotch-5.1 libspooles2.2 libsqlite3-0 libssl0.9.8 libsuperlu3 libtorque2 libumfpack5.4.0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 mime-support openmpi-bin openmpi-common python python-minimal python-numpy python-petsc4py python-support python2.6 python2.6-minimal 0 upgraded, 0 newly installed, 34 to remove and 0 not upgraded. After this operation, 71.4 MB disk space will be freed. (Reading database ... 8298 files and directories currently installed.) Removing python-petsc4py ... Removing libpetsc3.1 ... Removing libumfpack5.4.0 ... Removing libamd2.2.0 ... Removing libhypre-2.4.0 ... Removing libsuperlu3 ... Removing python-numpy ... Removing liblapack3gf ... Removing libblas3gf ... Removing python-support ... Removing python ... Removing python2.6 ... Removing libexpat1 ... Removing libspooles2.2 ... Removing openmpi-bin ... Removing libhdf5-openmpi-1.8.4 ... Removing libopenmpi1.3 ... Removing libgfortran3 ... Removing libibverbs1 ... Removing libncursesw5 ... Removing libnuma1 ... Removing libscotch-5.1 ... Removing libsqlite3-0 ... Removing python-minimal ... Removing python2.6-minimal ... Removing libssl0.9.8 ... Removing libtorque2 ... Removing libx11-6 ... Removing libx11-data ... Removing libxcb1 ... Removing libxau6 ... Removing libxdmcp6 ... Removing mime-support ... Removing openmpi-common ... 0m22.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'remove', 'libx11-data', 'libumfpack5.4.0', 'libxcb1', 'libamd2.2.0', 'python-support', 'libnuma1', 'libncursesw5', 'libblas3gf', 'libhypre-2.4.0', 'openmpi-common', 'libopenmpi1.3', 'libsqlite3-0', 'libgfortran3', 'libxau6', 'libssl0.9.8', 'libx11-6', 'python', 'openmpi-bin', 'python-numpy', 'python2.6', 'libspooles2.2', 'libtorque2', 'mime-support', 'python-minimal', 'libscotch-5.1', 'liblapack3gf', 'python2.6-minimal', 'libibverbs1', 'libpetsc3.1', 'libhdf5-openmpi-1.8.4', 'libsuperlu3', 'libexpat1', 'libxdmcp6', 'python-petsc4py'] 0m22.9s INFO: Running scripts post_remove 0m22.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_remove_exceptions_lenny'] 0m22.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_remove_exceptions_lenny'] 0m22.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_remove_extras'] 0m22.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_remove_extras'] 0m22.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--purge', 'libx11-data', 'libumfpack5.4.0', 'libxcb1', 'libamd2.2.0', 'python-support', 'libnuma1', 'libncursesw5', 'libblas3gf', 'libhypre-2.4.0', 'openmpi-common', 'libopenmpi1.3', 'libsqlite3-0', 'libgfortran3', 'libxau6', 'libssl0.9.8', 'libx11-6', 'python', 'openmpi-bin', 'python-numpy', 'python2.6', 'libspooles2.2', 'libtorque2', 'mime-support', 'python-minimal', 'libscotch-5.1', 'liblapack3gf', 'python2.6-minimal', 'libibverbs1', 'libpetsc3.1', 'libhdf5-openmpi-1.8.4', 'libsuperlu3', 'libexpat1', 'libxdmcp6'] 0m23.2s DUMP: dpkg: warning: ignoring request to remove libx11-data which isn't installed. (Reading database ... 6267 files and directories currently installed.) Removing libumfpack5.4.0 ... Purging configuration files for libumfpack5.4.0 ... Removing libxcb1 ... Purging configuration files for libxcb1 ... Removing libamd2.2.0 ... Purging configuration files for libamd2.2.0 ... Removing python-support ... Purging configuration files for python-support ... Removing libnuma1 ... Purging configuration files for libnuma1 ... Removing libncursesw5 ... Purging configuration files for libncursesw5 ... Removing libblas3gf ... Purging configuration files for libblas3gf ... Removing libhypre-2.4.0 ... Purging configuration files for libhypre-2.4.0 ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed. Removing libopenmpi1.3 ... Purging configuration files for libopenmpi1.3 ... Removing libsqlite3-0 ... Purging configuration files for libsqlite3-0 ... Removing libgfortran3 ... Purging configuration files for libgfortran3 ... Removing libxau6 ... Purging configuration files for libxau6 ... Removing libssl0.9.8 ... Purging configuration files for libssl0.9.8 ... Removing libx11-6 ... Purging configuration files for libx11-6 ... Removing python ... Purging configuration files for python ... Removing openmpi-bin ... Purging configuration files for openmpi-bin ... dpkg: warning: ignoring request to remove python-numpy which isn't installed. Removing python2.6 ... Purging configuration files for python2.6 ... Removing libspooles2.2 ... Purging configuration files for libspooles2.2 ... Removing libtorque2 ... Purging configuration files for libtorque2 ... Removing mime-support ... Purging configuration files for mime-support ... dpkg: warning: ignoring request to remove python-minimal which isn't installed. Removing libscotch-5.1 ... Purging configuration files for libscotch-5.1 ... Removing liblapack3gf ... Purging configuration files for liblapack3gf ... Removing python2.6-minimal ... Purging configuration files for python2.6-minimal ... Removing libibverbs1 ... Purging configuration files for libibverbs1 ... Removing libpetsc3.1 ... Purging configuration files for libpetsc3.1 ... Removing libhdf5-openmpi-1.8.4 ... Purging configuration files for libhdf5-openmpi-1.8.4 ... Removing libsuperlu3 ... Purging configuration files for libsuperlu3 ... Removing libexpat1 ... Purging configuration files for libexpat1 ... Removing libxdmcp6 ... Purging configuration files for libxdmcp6 ... 0m23.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--purge', 'libx11-data', 'libumfpack5.4.0', 'libxcb1', 'libamd2.2.0', 'python-support', 'libnuma1', 'libncursesw5', 'libblas3gf', 'libhypre-2.4.0', 'openmpi-common', 'libopenmpi1.3', 'libsqlite3-0', 'libgfortran3', 'libxau6', 'libssl0.9.8', 'libx11-6', 'python', 'openmpi-bin', 'python-numpy', 'python2.6', 'libspooles2.2', 'libtorque2', 'mime-support', 'python-minimal', 'libscotch-5.1', 'liblapack3gf', 'python2.6-minimal', 'libibverbs1', 'libpetsc3.1', 'libhdf5-openmpi-1.8.4', 'libsuperlu3', 'libexpat1', 'libxdmcp6'] 0m23.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--purge', 'python-petsc4py'] 0m23.3s DUMP: dpkg: warning: ignoring request to remove python-petsc4py which isn't installed. 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--purge', 'python-petsc4py'] 0m23.3s INFO: Running scripts post_purge 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_purge_exceptions'] 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'tmp/scripts/post_purge_exceptions'] 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--purge', '--pending'] 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--purge', '--pending'] 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--remove', '--pending'] 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg', '--remove', '--pending'] 0m23.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m23.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m24.3s ERROR: WARN: Broken symlinks: /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf 0m24.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg-divert', '--list'] 0m24.4s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m24.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'dpkg-divert', '--list'] 0m24.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'clean'] 0m24.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'apt-get', 'clean'] 0m25.4s INFO: Warning: Package purging left files on system: /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf not owned These files seem to have been left by dependencies rather than by packages being explicitly tested. 0m25.4s INFO: PASS: Installation and purging test. 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'umount', '/proc'] 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvf3jxd', 'umount', '/proc'] 0m25.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m25.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpvf3jxd'] 0m25.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpvf3jxd 0m25.7s INFO: PASS: All tests. 0m25.7s INFO: piuparts run ends. ret=0 End: 2014-03-12 15:32:35 UTC