Start: 2024-04-25 07:34:54 GMT Package: med-all Source: debian-med Version: 3.8.1 Installed-Size: 14 Maintainer: Debian Med Packaging Team Architecture: all Recommends: med-bio, med-bio-dev, med-statistics Suggests: med-cloud, med-data, med-dental, med-epi, med-his, med-imaging, med-imaging-dev, med-laboratory, med-oncology, med-pharmacy, med-physics, med-practice, med-psychology, med-research, med-tools, med-typesetting Description: Default selection of tasks for Debian Med Description-md5: a76b99b113b87aeb36fdd823ba207597 Section: metapackages Priority: optional Filename: pool/main/d/debian-med/med-all_3.8.1_all.deb Size: 7084 MD5sum: bb73134834596f754613d7d780115b84 SHA256: 5660f6153cdc6587a32beb87215e6c1da528cd0ae52b4b8619d56681b27a5b85 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d bookworm --no-upgrade-test --apt med-all=3.8.1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.1~202403190841~1.4-4-g85045c69 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d bookworm --no-upgrade-test --apt med-all=3.8.1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-28-amd64 #1 SMP Debian 5.10.209-2 (2024-01-31) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpo_41_acv 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpo_41_acv 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/proc'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/proc'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/console'] 0m0.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/console'] 0m0.6s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/shm'] 0m0.6s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/shm'] 0m0.6s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m0.6s DEBUG: Created policy-rc.d and chmodded it. 0m0.6s DEBUG: Created resolv.conf. 0m0.6s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpo_41_acv/tmp/scripts/ 0m0.6s INFO: Running scripts post_chroot_unpack 0m0.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-get', 'update'] 0m1.8s DUMP: Hit:1 http://deb.debian.org/debian bookworm InRelease Reading package lists... 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-get', 'update'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.9s DUMP: 0942a352c5bc637c4fdbc12bf31cd5ba - 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.9s INFO: Running scripts post_setup 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_dummy_users'] 0m3.8s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_dummy_users'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_forbid_home'] 0m3.8s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_forbid_home'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.8s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_minimize'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_minimize'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_zz_backports'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_setup_zz_backports'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-get', 'clean'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-get', 'clean'] 0m3.8s DEBUG: Recording chroot state 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.5s DUMP: install ok installed adduser adduser 3.134 install ok installed apt apt 2.6.1 install ok installed base-files base-files 12.4+deb12u5 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2+b2 install ok installed bsdutils bsdutils 1:2.38.1-5+b1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-2 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2023.3+deb12u1 install ok installed debianutils debianutils 5.7-0.5~deb12u1 install ok installed diffutils diffutils 1:3.8-4 install ok installed dpkg dpkg 1.21.22 install ok installed e2fsprogs e2fsprogs 1.47.0-2 install ok installed findutils findutils 4.9.0-4 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14 install ok installed gpgv gpgv 2.2.40-1.1 install ok installed grep grep 3.8-5 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.6.1 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.9-1 install ok installed libaudit1:amd64 libaudit1 1:3.0.9-1 install ok installed libblkid1:amd64 libblkid1 2.38.1-5+b1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-9+deb12u4 install ok installed libc6:amd64 libc6 2.36-9+deb12u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b3 install ok installed libcap2:amd64 libcap2 1:2.66-4 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.270 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.9-2+deb12u2 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.2 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-5+b1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6+deb12u1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6+deb12u1 install ok installed libpam-runtime libpam-runtime 1.5.2-6+deb12u1 install ok installed libpam0g:amd64 libpam0g 1.5.2-6+deb12u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b3 install ok installed libselinux1:amd64 libselinux1 3.4-1+b6 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b5 install ok installed libsepol2:amd64 libsepol2 3.4-2.1 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-5+b1 install ok installed libss2:amd64 libss2 1.47.0-2 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14 install ok installed libsystemd0:amd64 libsystemd0 252.22-1~deb12u1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.4-4 install ok installed libudev1:amd64 libudev1 252.22-1~deb12u1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-5+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.4+dfsg2-5 install ok installed login login 1:4.13+dfsg1-1+b1 install ok installed logsave logsave 1.47.0-2 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-5+b1 install ok installed ncurses-base ncurses-base 6.4-4 install ok installed ncurses-bin ncurses-bin 6.4-4 install ok installed passwd passwd 1:4.13+dfsg1-1+b1 install ok installed perl-base perl-base 5.36.0-7+deb12u1 install ok installed sed sed 4.9-1 install ok installed sysvinit-utils sysvinit-utils 3.06-4 install ok installed tar tar 1.34+dfsg-1.2+deb12u1 install ok installed tzdata tzdata 2024a-0+deb12u1 install ok installed usr-is-merged usr-is-merged 37~deb12u1 install ok installed util-linux util-linux 2.38.1-5+b1 install ok installed util-linux-extra util-linux-extra 2.38.1-5+b1 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'dpkg-divert', '--list'] 0m4.5s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'dpkg-divert', '--list'] 0m4.5s INFO: Running scripts is_testable 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/is_testable_uninstallable'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/is_testable_uninstallable'] 0m4.5s INFO: apt-cache does not know about any of the requested packages 0m4.5s INFO: Running scripts pre_test 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_test_exceptions'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_test_exceptions'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_test_root_password'] 0m4.5s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_test_root_password'] 0m4.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpo_41_acv'] 0m5.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpo_41_acv'] 0m5.7s DEBUG: No broken symlinks as far as we can find. 0m5.7s INFO: Running scripts pre_install 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_database-server'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_database-server'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_exceptions'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_exceptions'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_extras'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_extras'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpo_41_acv'] 0m6.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpo_41_acv'] 0m6.7s DEBUG: No broken symlinks as far as we can find. 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-cache', 'policy'] 0m7.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release v=12.5,o=Debian,a=stable,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-cache', 'policy'] 0m7.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-cache', 'policy', 'med-all'] 0m7.7s DUMP: med-all: Installed: (none) Candidate: 3.8.1 Version table: 3.8.1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-cache', 'policy', 'med-all'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-get', '-y', 'install', 'med-all=3.8.1'] 38m27.8s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: abacas abpoa abyss acedb-other adapterremoval adun-core adwaita-icon-theme aegean aevol aglfn alien-hunter alsa-topology-conf alsa-ucm-conf alter-sequence-alignment altree amap-align ampliconnoise andi ant ant-optional antlr antlr3 antlr4 any2fasta apache2 apache2-bin apache2-data apache2-utils apbs apbs-data aragorn arden ariba art-nextgen-simulation-tools artemis artfastqgenerator aspell aspell-en assembly-stats assemblytics at-spi2-common at-spi2-core atac ataqv atropos augur augustus augustus-data autoconf autodock autodock-vina autogrid automake autopoint autotools-dev avahi-daemon avogadro avogadro-utils axe-demultiplexer baitfisher bali-phy ballview bamclipper bamkit bamtools bandage barrnap bash-completion bbmap bc bcalm bcftools beads beagle beast-mcmc beast2-mcmc bedops bedtools belvu berkeley-express binfmt-support binutils binutils-common binutils-x86-64-linux-gnu bio-eagle bio-rainbow bio-tradis bio-vcf bioawk biobambam2 bioperl bioperl-run biosquid biosyntax biosyntax-common biosyntax-gedit biosyntax-less biosyntax-vim bitseq black blasr blends-common blixem blt bolt-lmm bowtie bowtie2 boxshade bppphyview bppsuite brig bsdextrautils btllib-tools bubblewrap build-essential busco bustools bwa bzip2 bzip2-doc ca-certificates ca-certificates-java canu cassiopee cat-bat cclib cct cd-hit cdbfasta centrifuge cgview chado-utils changeo chemical-mime-data chimeraslayer chromhmm chromimpute cif-tools circlator circos circos-tools clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx cnvkit codonw coinor-cbc coinor-libcbc3 coinor-libcgl1 coinor-libclp1 coinor-libcoinutils3v5 coinor-libosi1v5 comet-ms concavity conservation-code covtobed cpp cpp-12 crac csb curl cutadapt cutesv cwl-upgrader cwltool cython3 daligner damapper dascrubber datamash dawg dazzdb dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service debhelper default-jdk default-jdk-headless default-jre default-jre-headless delly density-fitness dextractor dh-autoreconf dh-strip-nondeterminism dialign dialign-tx dialign-tx-data diamond-aligner dictionaries-common dirmngr discosnp disulfinder disulfinder-data dmidecode dmsetup dnaclust dnarrange docbook-xml docutils-common dotter dpkg-dev drop-seq-tools dssp dvipng dvisvgm dwgsim dwz e-mem ea-utils ecopcr edtsurf eigensoft elph emacsen-common embassy-domainatrix embassy-domalign embassy-domsearch emboss emboss-data emboss-lib emmax enchant-2 epstool estscan examl exonerate f2j fakeroot fasta3 fastahack fastani fastaq fastdnaml fastjar fastlink fastml fastp fastq-pair fastqc fastqtl fasttree fftw-dev fftw2 figtree file filtlong fitgcp flash flexbar flye fml-asm fontconfig fontconfig-config fonts-circos-symbols fonts-cmu fonts-dejavu fonts-dejavu-core fonts-dejavu-extra fonts-droid-fallback fonts-font-awesome fonts-freefont-otf fonts-freefont-ttf fonts-gfs-baskerville fonts-gfs-porson 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r-cran-readr r-cran-readxl r-cran-recipes r-cran-redland r-cran-registry r-cran-rematch r-cran-rematch2 r-cran-remotes r-cran-rentrez r-cran-reshape r-cran-reshape2 r-cran-restfulr r-cran-reticulate r-cran-rex r-cran-rgdal r-cran-rgenoud r-cran-rgl r-cran-rhandsontable r-cran-rio r-cran-ritis r-cran-rjava r-cran-rjson r-cran-rlang r-cran-rlumshiny r-cran-rmarkdown r-cran-rmpi r-cran-rms r-cran-rmysql r-cran-rncl r-cran-rnetcdf r-cran-rnexml r-cran-rngtools r-cran-robumeta r-cran-robustbase r-cran-rocr r-cran-rose r-cran-rotl r-cran-roxygen2 r-cran-rpart r-cran-rpostgresql r-cran-rprojroot r-cran-rredlist r-cran-rsample r-cran-rsclient r-cran-rsconnect r-cran-rspectra r-cran-rsqlite r-cran-rstatix r-cran-rstudioapi r-cran-rsvd r-cran-rsvg r-cran-rtsne r-cran-runit r-cran-rversions r-cran-rwave r-cran-s2 r-cran-samr r-cran-sandwich r-cran-sass r-cran-scales r-cran-scatterd3 r-cran-scattermore r-cran-scatterplot3d r-cran-sctransform r-cran-sdmtools r-cran-segmented r-cran-selectr r-cran-seqinr r-cran-sessioninfo r-cran-setrng r-cran-seurat r-cran-seuratobject r-cran-sf r-cran-sfsmisc r-cran-sftime r-cran-shape r-cran-shazam r-cran-shiny r-cran-shinybs r-cran-shinydashboard r-cran-shinyfiles r-cran-shinyjs r-cran-sitmo r-cran-slider r-cran-sm r-cran-sna r-cran-snow r-cran-snowfall r-cran-sodium r-cran-solrium r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spam r-cran-sparsem r-cran-spatial r-cran-spatstat r-cran-spatstat.core r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-spdata r-cran-spdep r-cran-spelling r-cran-spp r-cran-squarem r-cran-stars r-cran-statmod r-cran-statnet.common r-cran-stringdist r-cran-stringi r-cran-stringr r-cran-strucchange r-cran-survival r-cran-svglite r-cran-swagger r-cran-sys r-cran-systemfit r-cran-systemfonts r-cran-taxize r-cran-tcr r-cran-teachingdemos r-cran-tensor r-cran-terra r-cran-testit r-cran-testthat r-cran-textshaping r-cran-tfmpvalue r-cran-th.data r-cran-thematic r-cran-themis r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tigger r-cran-tikzdevice r-cran-timechange r-cran-timedate r-cran-timereg r-cran-timeseries r-cran-tinytest r-cran-tinytex r-cran-transformr r-cran-treescape r-cran-triebeard r-cran-truncdist r-cran-tseries r-cran-tsne r-cran-ttr r-cran-tufte r-cran-tweenr r-cran-tzdb r-cran-ucminf r-cran-units r-cran-urca r-cran-urlchecker r-cran-urltools r-cran-uroot r-cran-usethis r-cran-utf8 r-cran-uuid r-cran-uwot r-cran-v8 r-cran-vcr r-cran-vctrs r-cran-vdiffr r-cran-vegan r-cran-vipor r-cran-viridis r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-warp r-cran-waveslim r-cran-wavethresh r-cran-webfakes r-cran-webgestaltr r-cran-webmockr r-cran-webshot r-cran-webutils r-cran-wgcna r-cran-whisker r-cran-wikidataqueryservicer r-cran-wikidatar r-cran-wikipedir r-cran-wikitaxa r-cran-withr r-cran-wk r-cran-wkutils r-cran-worrms r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xopen r-cran-xslt r-cran-xtable r-cran-xts r-cran-yaml r-cran-zip r-cran-zoo r-doc-html r-mathlib r-other-ascat r-other-mott-happy.hbrem r-other-rajewsky-dropbead r-recommended racon radiant ragout rake rambo-k rampler rapidjson-dev rapmap rasmol raster3d rate4site raxml ray rdkit-data rdp-alignment rdp-classifier rdp-classifier-doc rdp-readseq readline-common readseq readucks reapr recan relion relion-gui repeatmasker-recon reprof resfinder resfinder-db rna-star rnahybrid roary rockhopper roguenarok rpcsvc-proto rsem rtax ruby ruby-bio ruby-crb-blast ruby-facade ruby-fixwhich ruby-net-telnet ruby-pathname2 ruby-rubygems ruby-sdbm ruby-threach ruby-trollop ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration runcircos-gui saint salmid salmon sambamba samblaster samclip samtools savvy-util sbmltoolbox scala-library scoary scrappie scrm scythe seaview seer segemehl sensible-utils seqan-apps seqan-needle seqan-raptor seqkit seqmagick seqprep seqsero seqtk sfftw-dev sfftw2 sga sgml-base sgml-data shared-mime-info shasta shovill sibelia sibsim4 sickle sigma-align sim4 sim4db simka simkamin ska skesa skewer smalt smithwaterman smrtanalysis snakemake snap snap-aligner sniffles snp-sites snpeff snpomatic snpsift soapaligner soapdenovo soapdenovo2 soapsnp sortmerna source-highlight spaced spades spaln spaln-data sphinx-common sphinx-rtd-theme-common spoa sprai spread-phy sqlite3 squizz sra-toolkit srst2 ssake sse4.2-support ssl-cert sspace ssw-align stacks staden staden-common staden-io-lib-utils stringtie subread suitename sumaclust sumatra sumtrees surankco surpyvor survivor svim swarm sweed swi-prolog swi-prolog-core swi-prolog-core-packages swi-prolog-doc swi-prolog-nox swi-prolog-x swig swig4.0 sysstat systemd systemd-sysv systemd-timesyncd t-coffee t1utils tabix tantan tasksel tasksel-data tcl tcl8.6 tcllib tcsh teckit terraphast tex-common tex-gyre texinfo texlive-base texlive-bibtex-extra texlive-binaries texlive-fonts-recommended texlive-lang-greek texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures texlive-plain-generic texlive-science texlive-xetex theseus thesias tiddit tigr-glimmer time timgm6mb-soundfont tipa tk tk8.6 tk8.6-blt2.5 tklib tm-align tnseq-transit toil tombo tophat-recondition topp toppred tortoize trace2dbest tracetuner transdecoder transrate-tools transtermhp tree-puzzle tree-puzzle-doc treeview treeviewx trf trim-galore trimmomatic ttf-bitstream-vera tvc twopaco uc-echo ucf udev uil umap-learn umis uncalled unicode-data unicycler unicycler-data unikmer unixodbc-common unzip usb-modeswitch usb-modeswitch-data uuid-dev va-driver-all varna vcfanno vcftools vdpau-driver-all velocity velvet velvetoptimiser vim vim-addon-manager vim-common vim-runtime virulencefinder vmatch vsearch vt w3c-sgml-lib wget wham-align wigeon wise wise-data wpasupplicant x11-common x11-utils x11-xserver-utils x11proto-dev xauth xdg-dbus-proxy xdg-desktop-portal xdg-desktop-portal-gtk xdg-user-dirs xdg-utils xfonts-100dpi xfonts-encodings xfonts-utils xkb-data xml-core xorg-sgml-doctools xpore xsltproc xtrans-dev xxd xz-utils yaha yanagiba yanosim yelp yelp-xsl zenity zenity-common zip zlib1g-dev zutty Suggested packages: abacas-examples altree-examples ant-doc jython libbcel-java libjdepend-java libjsch-java apache2-doc apache2-suexec-pristine | apache2-suexec-custom art-nextgen-simulation-tools-profiles aspell-doc spellutils autoconf-archive gnu-standards autoconf-doc avahi-autoipd beagle-doc binutils-doc bio-eagle-examples trnascan-se python-black-doc blends-doc blt-demo bolt-lmm-doc bowtie-examples bowtie2-examples xfig bppsuite-examples pbgenomicconsensus cclib-data gnome-mime-data cpp-doc gcc-12-locales cpp-12-doc podman | docker.io | singularity-container cython-doc dh-make wordlist pinentry-gnome3 tor docbook docbook-dsssl docbook-xsl docbook-defguide debian-keyring meshlab embassy emboss-doc emboss-test liburi-encode-perl python3-mysqldb fastlink-doc fastqtl-doc mpi-defaults-bin fonts-noto g++-multilib g++-12-multilib gcc-12-doc gamgi-data gamgi-doc garlic-doc openbabel gasic-examples gawk-doc gbrowse-data gbrowse-calign libfile-nfslock-perl gcc-multilib flex bison gcc-doc gcc-12-multilib gdb-doc gdbserver gdpc-examples gqview gedit-plugins gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-12-multilib gfortran-12-doc git-daemon-run | git-daemon-sysvinit git-doc git-email git-gui gitk gitweb git-cvs git-mediawiki git-svn parcimonie xloadimage gnuplot-doc gnustep-make-doc gobjc-multilib gobjc-12-multilib scdaemon graphviz-doc groff groovy-doc frei0r-plugins gvfs hmmer-doc hmmer2-doc hunspell openoffice.org-hunspell | openoffice.org-core i965-va-driver-shaders imagemagick-doc autotrace cups-bsd | lpr | lprng enscript ffmpeg gimp grads hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils transfig ufraw-batch iproute2-doc isoquery ivy-doc libbcpg-java libbcprov-java libjsch-agent-proxy-java javacc-doc javahelp2-doc junit-doc kaptive-example libandroid-json-org-java-doc libevent-perl libio-async-perl libpoe-perl lrzip libasound2-plugins alsa-utils libatinject-jsr330-api-java-doc libdigest-hmac-perl libgssapi-perl libcuda1 libnvcuvid1 libnvidia-encode1 libaxis-java-doc libbamtools-doc libbenchmark-tools libxml-sax-expatxs-perl libbiojava-java-doc java-virtual-machine libbiojava4-java-doc libbiojava6-java-doc liblapack-doc libbluray-bdj libboost-doc libboost1.74-doc libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev libboost-context1.74-dev libboost-contract1.74-dev libboost-coroutine1.74-dev libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev libboost-graph1.74-dev libboost-graph-parallel1.74-dev libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev libboost-program-options1.74-dev libboost-python1.74-dev libboost-random1.74-dev libboost-serialization1.74-dev libboost-stacktrace1.74-dev libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev bsh rhino glibc-doc libfont-freetype-perl libcastor-java-doc jchempaint libclass-dbi-loader-perl libclass-dbi-mysql-perl libclass-dbi-sqlite-perl libclipper-doc colord libcommons-beanutils-java-doc libcommons-collections3-java-doc libcommons-collections4-java-doc libcommons-jxpath-java libcommons-vfs-java libgeronimo-jta-1.2-spec-java libcommons-digester-java-doc libcommons-httpclient-java-doc libcommons-io-java-doc libcommons-lang-java-doc libcommons-lang3-java-doc libavalon-framework-java libcommons-logging-java-doc libexcalibur-logkit-java libcommons-net-java-doc cups-common libcurl4-doc libgnutls28-dev libidn-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libscalar-properties-perl libnet-daemon-perl libsql-statement-perl libjson-any-perl libmath-base36-perl libmoosex-types-json-perl libmoosex-types-loadableclass-perl libmoosex-types-path-class-perl libmoosex-types-perl libdirectfb-extra libxpp2-java bzr libdv-bin oss-compat libdvdcss2 libeigen3-doc libenchant-2-voikko libfann-dev libfann-doc libfftw3-bin libfftw3-dev libfftw3-mpi-dev freetype2-doc libgd-tools gdbm-l10n geotiff-bin gdal-bin libgeotiff-epsg glew-utils low-memory-monitor libiodbc2-dev default-libmysqlclient-dev gnustep-base-doc libgoogle-gson-java-doc gphoto2 gpm graphicsmagick-dbg gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user libvisual-0.4-plugins gstreamer1.0-tools libhdf4-doc libhdf4-alt-dev hdf4-tools libhdf5-doc libhsqldb-java-doc libhtml-element-extended-perl libhwloc-contrib-plugins libice-doc icu-doc libdb-file-lock-perl libfile-readbackwards-perl libisospec++-doc libbcpkix-java libxml-security-java jackd2 libjackson2-annotations-java-doc libjboss-logging-java-doc libjcommander-java-doc libjcsp-java-doc libjdom1-java-doc jetty9 libjfreesvg-java-doc libjide-oss-java-doc libjmol-java-doc libjoda-convert-java libjoptsimple-java-doc libjs-jquery-lazyload libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc fonts-ubuntu fonts-yanone-kaffeesatz texlive-fonts-extra libjsap-java-doc libjson-simple-doc libjsonp-java-doc libjsoup-java-doc libjsr305-java-doc liblcms2-utils libdbd-csv-perl liblog-dispatch-filerotate-perl librrds-perl liblog4j1.2-java-doc libcommons-csv-java libconversant-disruptor-java libdisruptor-java libgeronimo-jms-1.1-spec-java libjackson2-dataformat-xml-java libjackson2-dataformat-yaml libjctools-java libjeromq-java libjanino-java libtomcat9-java liblrdf0-dev libtool-doc libcrypt-ssleay-perl liblzma-doc inkscape libmail-java-doc libjna-java libjna-platform-java libmatthew-java-doc secrecy libmaven-file-management-java-doc libmaven-shared-incremental-java-doc libmaven-shared-utils-java-doc libswt-gtk-4-java libencode-eucjpascii-perl libencode-hanextra-perl libpod2-base-perl default-mta | mail-transport-agent libmojolicious-perl libmmtf-java-doc libnanoxml2-java-doc ncurses-doc libngs-java-doc notification-daemon avahi-autoipd | zeroconf odbc-postgresql tdsodbc ogdi-bin openmpi-doc openms-doc opus-tools uuid libscalar-number-perl pciutils pcscd pipewire libeclipse-jdt-core-java libplexus-utils2-java-doc libplexus-velocity-java-doc pulseaudio libpwiz-doc libqdox-java-doc libqscintilla2-doc qgnomeplatform-qt5 qt5-image-formats-plugins raptor2-utils rasqal-utils libraw1394-doc librcsb-core-wrapper-doc librdf-storage-mysql librdf-storage-postgresql librdf-storage-sqlite librdf-storage-virtuoso redland-utils readline-doc librostlab-blast-doc librostlab-doc librsvg2-bin libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal libsasl2-modules-ldap libsasl2-modules-otp libsasl2-modules-sql scalapack-doc lm-sensors serdi testng libsm-doc sndiod libsnpeff-java-doc libnet-jabber-perl sordi libtest-fatal-perl speex libssl-doc libstatgen-doc libstdc++-12-doc libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libswing-layout-java-doc libtagsoup-java-doc libtbb-doc libtemplate-plugin-gd-perl libtemplate-plugin-xml-perl gcj-jdk tre-agrep libbusiness-isbn-perl libwacom-bin gstreamer1.0-alsa libwildmidi-config libauthen-ntlm-perl libx11-doc libxalan2-java-doc libxsltc-java libxcb-doc libxerces2-java-doc libxext-doc libxml-commons-resolver1.1-java-doc libunicode-map8-perl libunicode-string-perl xml-twig-tools libxmlgraphics-commons-java-doc libxom-java-doc libxsimd-doc libcglib-nodep-java libjdom2-java libjettison-java libkxml2-java libxt-doc libyaml-shell-perl llvm-14-doc ruby-cassiopee loki-doc m4-doc maffilter-examples make-doc apparmor massxpert-doc graphmap mcl-doc med-cloud med-data med-dental med-epi med-his med-imaging med-imaging-dev med-laboratory med-oncology med-pharmacy med-physics med-practice med-psychology med-research med-tools med-typesetting acacia adun.app agat amos-assembler amoscmp anfo annovar apollo arachne arb arvados asap axparafit axpcoords bagpipe bambus bax2bam bcbio biceps big-blast bigsdb bismark blat blimps-utils blobology braker btk-core cactus caftools card-rgi catfishq cdna-db cellprofiler cinema cluster3 cmap conda-package-handling condetri contrafold contralign coot copycat covpipe crossbow crux-toolkit cufflinks cytoscape dazzle deepbinner deepnano dendroscope diann dnapi e-hive ecell embassy-phylip emboss-explorer ensembl ensembl-vep epigrass estferret euler-sr euler2 exabayes exalt excavator ffp fieldbioinformatics figaro flappie forester forge galaxy gatk gbrowse-syn genemark genesplicer genetrack genezilla genographer gerp++ getdata glimmerhmm gmv gramalign graphbin graphmap2 haploview hawkeye htqc hts-nim-tools idefix idseq-bench igdiscover illustrate inspect jbrowse jigsaw kempbasu libhnswlib-dev lofreq mach-haplotyper mage2tab maker2 manta marginphase martj maude maxd medaka meme mesquite metabit metaeuk metarep metastudent-data-2 migrate minimus mirbase modeller molekel mosaik-aligner mpsqed mrs msatfinder mugsy mummergpu mview nano-snakemake nanocall nanocomp nanoplot ncbi-magicblast nextsv ngila ngsqctoolkit nw-align oases obo-edit oligoarrayaux omegamap oncofuse operondb optitype paipline pangolin partigene partitionfinder patristic pcma pfaat phagefinder phpphylotree phylographer phylophlan phyloviz-core phylowin pigx-scrnaseq pipasic plato pomoxis pplacer profit profphd prot4est psipred pssh2 pufferfish purple pyrophosphate-tools python3-alignlib python3-intake python3-orange python3-pychopper python3-pyflow q2-alignment q2-composition q2-dada2 q2-deblur q2-diversity q2-emperor q2-fragment-insertion q2-gneiss q2-longitudinal q2-phylogeny q2-sample-classifier q2-vsearch qtlcart qtlreaper qualimap quast r-bioc-annotationhub r-bioc-bitseq r-bioc-ctc r-bioc-experimenthub r-bioc-genomicfiles r-bioc-grohmm r-bioc-isoformswitchanalyzer r-bioc-mofa2 r-bioc-org.hs.eg.db r-bioc-org.mm.eg.db r-bioc-qusage r-bioc-structuralvariantannotation r-cran-amap r-cran-biwt r-cran-drinsight r-cran-epir r-cran-minerva r-cran-optimalcutpoints r-cran-parmigene r-other-apmswapp r-other-fastbaps raccoon raxml-ng rbs-finder relion-cuda relion-gui-cuda repeatmasker roadtrips roche454ace2caf rosa rose rsat sailfish sap science-workflow sepp seq-gen seq-seq-pan seqcluster seqwish sift signalalign sina sistr situs snippy solvate sourmash sparta splitstree ssaha strap strap-base strelka tab2mage tacg tandem-genotypes taverna taxinspector tetra tide tigr-glimmer-mg tipp tn-seqexplorer tophat treebuilder3d trinityrnaseq tripal twain ufasta ugene umap unc-fish uniprime varmatch varscan vdjtools vg vienna-rna viewmol vmd x-tandem-pipeline zodiac-zeden bioclipse capsule-nextflow ctdconverter cthreadpool-dev cwlformat libargs-dev libatomicqueue-dev libbam-dev libbbhash-dev libbtllib-dev libcapsule-maven-nextflow-java libconcurrentqueue-dev libfast-perl libforester-java libfreecontact-dev libfreecontact-doc libfreecontact-perl libgatk-bwamem-java libgatk-bwamem-jni libgatk-fermilite-java libgatk-fermilite-jni libgenomicsdb-dev libgenomicsdb-java libmaus2-dev libmilib-java libminimap-dev libmmblib-dev libmodhmm-dev libnexml-java libngs-sdk-dev libqcpp-dev librelion-dev libroadrunner-dev libsavvy-dev libsuma-dev libsvmloc-dev libswarm2-dev libterraces-dev libtfbs-perl libxxsds-dynamic-dev octace-bioinfo python3-bcbio python3-bioblend python3-biopython-sql python3-compclust python3-conda-package-streaming python3-consensuscore2 python3-ctdopts python3-galaxy-lib python3-joypy python3-misopy python3-pycosat python3-roadrunner python3-scanpy python3-seqcluster q2-shogun q2cwl q2lint r-bioc-affxparser r-bioc-affy r-bioc-affyio r-bioc-altcdfenvs r-bioc-arrayexpress r-bioc-bridgedbr r-bioc-cager r-bioc-complexheatmap r-bioc-dada2 r-bioc-deseq r-bioc-enrichedheatmap r-bioc-graph r-bioc-gseabase r-bioc-gsva r-bioc-hypergraph r-bioc-makecdfenv r-bioc-nanostringqcpro r-bioc-oligo r-bioc-oligoclasses r-bioc-purecn r-bioc-rbgl r-bioc-rentrez r-bioc-shortread r-bioc-snpstats r-bioc-titancna r-cran-future.batchtools r-cran-itertools r-cran-metap r-cran-robustrankaggreg r-cran-rook r-cran-venndiagram ruby-rgfa rstudio science-statistics melting-gui menu-l10n gksu | kde-cli-tools | ktsuss gridengine-client minexpert2-doc mira-doc mpqc-support mrbayes-doc mustang-testdata libxml2-utils nim-doc nim-hts-examples npm octave-dev openjdk-17-demo openjdk-17-source visualvm fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic libopenms2.6.0 topp keychain libpam-ssh monkeysphere ssh-askpass texlive-luatex pandoc-citeproc context wkhtmltopdf ghc php python libjs-katex citation-style-language-styles csh fish zsh parsinsert-testdata ed diffutils-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl perlprimer-doc phylip-doc pinentry-doc libmail-box-perl blast2 polkitd-pkla poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum postgresql-15 postgresql-doc-15 probcons-extra profchop profcon metadisorder snapfun xfig | ivtools-bin | tgif | transfig pybind11-doc pylint-doc python3-doc python3-venv python-argon2-doc python-astropy-doc python3-astropy-affiliated python-attr-doc python-azure-doc python-biom-format-doc python3-gunicorn redis-server muscle3 python3-mmtf python3-psycopg2 python-bleach-doc python-blinker-doc python-blosc-doc python-bottleneck-doc python-bytecode-doc qsopt-ex python-cogent-doc python-configobj-doc python3-twisted python-coverage-doc python-cryptography-doc python3-cryptography-vectors python-cvxopt-doc cwl-utils python-cycler-doc ipython python-dask-doc python3-graphviz python3-skimage python-python-deeptoolsintervals-doc python3-objgraph python3-examples docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french python-elasticsearch-doc python-fabio-doc python-fastjsonschema-doc python-flask-doc python-flufl.lock-doc python-fsspec-doc python-future-doc python-gevent-doc python-git-doc python-greenlet-dev python-greenlet-doc python-h5py-doc python3-genshi python-hypothesis-doc python-invoke-doc python-ipython-doc python-ipywidgets-doc python-jinja2-doc python-jsonschema-doc python3-crypto llvmlite-doc python-lmfit-doc python-lockfile-doc python-lxml-doc python3-beaker python-markdown-doc cm-super-minimal fonts-staypuft python3-cairocffi python3-gobject python3-sip texlive-extra-utils python-mock-doc python-mpmath-doc python3-gmpy2 python-nacl-doc python-natsort-doc python-nbconvert-doc python-nose-doc python-notebook-doc nvidia-cuda-toolkit libgle3 python-openssl-doc python3-openssl-dbg python3-pairtools-examples python-pandas-doc python3-gssapi python-patsy-doc python-pbcore-doc python-pdbx-doc python-pexpect-doc python-pika-doc python-pil-doc python-ply-doc python-pomegranate-doc python-propka-doc python-prov-doc python-psutil-doc subversion python-pybedtools-doc python-pybel-doc python-pycurl-doc pydevd python-pygit2-doc python-pygments-doc python-pygraphviz-doc python-pygtrie-doc python-pyinotify-doc python-pymongo-doc python-pyparsing-doc python-pyranges-doc python-pytest-mock-doc python-rdflib-doc rdkit-doc python3-hiredis pdf-viewer python3-egenix-mxtexttools python-reportlab-doc python3-socks python-requests-doc python-rpy-docs python-scipy-doc python-setuptools-doc python-skbio-doc python3-dap python-sklearn-doc python3-stemmer python-sortedcontainers-doc latexmk python3-sphinx-rtd-theme sphinx-doc python-sqlalchemy-doc python3-fdb python3-pymssql python3-asyncpg python3-aiosqlite python-statsmodels-doc python-sympy-doc python3-netcdf4 python-tables-doc vitables python-tenacity-doc python-terminado-doc python-tinycss2-doc tix python3-tk-dbg python-toolz-doc python-tornado-doc python-uncertainties-doc python-werkzeug-doc wx3.2-doc python-yapsy-doc python-zstandard-doc python3.11-venv qcat-examples firebird-dev libpq-dev libsqlite3-dev unixodbc-dev qtltools-example elpa-ess r-doc-info | r-doc-pdf r-cran-princurve r-bioc-hdf5array r-bioc-all r-cran-batchjobs r-cran-bbmisc r-cran-batchtools r-bioc-residualmatrix r-bioc-tximeta r-bioc-tximportdata r-bioc-glmgampoi r-bioc-ggbio r-bioc-dexseq r-bioc-edaseq r-cran-biasedurn r-cran-gss r-bioc-ihw r-cran-upsetr r-cran-survminer r-bioc-scrnaseq r-bioc-scran r-cran-effects r-cran-fgarch r-cran-gee r-cran-pander r-cran-bigmemory r-cran-ff r-cran-cmprsk r-cran-gmm r-cran-lavaan r-cran-leaps r-cran-lsmeans r-cran-ordinal r-cran-psych r-cran-rgeos r-cran-robust r-cran-spatialreg r-cran-survey r-cran-bradleyterry2 r-cran-party r-cran-gclus r-cran-whoami r-cran-vcd r-cran-seriation r-cran-nanotime r-cran-lintr r-cran-pingr r-cran-pkgmaker r-cran-suppdists r-cran-bayesplot r-cran-bayestestr r-cran-brms r-cran-logspline r-cran-multcompview r-cran-rmpfr r-cran-unitizer r-cran-ggforce r-cran-janeaustenr r-cran-gridsvg r-cran-tidyverse r-cran-rjags r-cran-tiff r-cran-irdisplay r-cran-clue r-cran-rsolnp r-cran-epi r-cran-glmmtmb r-cran-tkrplot r-cran-corpcor r-cran-animation r-cran-dendextend r-cran-gbm r-cran-mlr r-cran-partykit r-cran-pbmcapply r-cran-mcmcpack r-cran-tcltk2 r-cran-splines2 r-cran-git2r r-cran-rvest r-bioc-monocle r-cran-vgam r-cran-mixtools r-cran-gmp r-cran-rlecuyer r-cran-isocodes r-cran-dbscan r-cran-sem r-cran-zeallot r-cran-vioplot r-cran-fftw rapidjson-doc rasmol-doc raster3d-doc ri ruby-dev bundler matlab libsbml5-matlab ispcr sgml-base-doc perlsgml w3-recs opensp sibelia-examples pbh5tools pbbarcode pbalign falcon slurm-client snakemake-doc genomics.cn-soapsnp sqlite3-doc ssake-examples staden-io-lib-examples elpa-ediprolog swi-prolog-java swi-prolog-odbc swi-prolog-bdb swig-doc swig-examples swig4.0-examples swig4.0-doc isag systemd-container systemd-homed systemd-userdbd systemd-boot systemd-resolved libtss2-esys-3.0.2-0 libtss2-mu0 libtss2-rc0 t-coffee-examples tcl-tclreadline tcllib-critcl xpdf | pdf-viewer xzdec texlive-fonts-recommended-doc texlive-latex-base-doc wp2latex icc-profiles texlive-latex-extra-doc texlive-latex-recommended-doc texlive-pstricks dot2tex prerex texlive-pictures-doc vprerex texlive-science-doc theseus-examples fluid-soundfont-gm tipa-doc podman | docker.io | singularity-container | docker-ce tophat2 transdecoder-doc treetool umis-examples comgt wvdial nvidia-vdpau-driver nvidia-tesla-440-vdpau-driver nvidia-tesla-418-vdpau-driver nvidia-legacy-390xx-vdpau-driver nvidia-legacy-340xx-vdpau-driver velocity-doc velvet-example ctags vim-doc vim-scripts wise-doc wpagui libengine-pkcs11-openssl mesa-utils nickle cairo-5c xorg-docs-core accountsservice evince xdg-desktop-portal-gnome xfs | xserver xpore-doc Recommended packages: r-cran-qvalue r-cran-tools blast2 ffindex muscle3 profphd qtoctave stringtie-examples The following NEW packages will be installed: abacas abpoa abyss acedb-other adapterremoval adun-core adwaita-icon-theme aegean aevol aglfn alien-hunter alsa-topology-conf alsa-ucm-conf alter-sequence-alignment altree amap-align ampliconnoise andi ant ant-optional antlr antlr3 antlr4 any2fasta apache2 apache2-bin apache2-data apache2-utils apbs apbs-data aragorn arden ariba art-nextgen-simulation-tools artemis artfastqgenerator aspell aspell-en assembly-stats assemblytics at-spi2-common at-spi2-core atac ataqv atropos augur augustus augustus-data autoconf autodock autodock-vina autogrid automake autopoint autotools-dev avahi-daemon avogadro avogadro-utils axe-demultiplexer baitfisher bali-phy ballview bamclipper bamkit bamtools bandage barrnap bash-completion bbmap bc bcalm bcftools beads beagle beast-mcmc beast2-mcmc bedops bedtools belvu berkeley-express binfmt-support binutils binutils-common binutils-x86-64-linux-gnu bio-eagle bio-rainbow bio-tradis bio-vcf bioawk biobambam2 bioperl bioperl-run biosquid biosyntax biosyntax-common biosyntax-gedit biosyntax-less biosyntax-vim bitseq black blasr blends-common blixem blt bolt-lmm bowtie bowtie2 boxshade bppphyview bppsuite brig bsdextrautils btllib-tools bubblewrap build-essential busco bustools bwa bzip2 bzip2-doc ca-certificates ca-certificates-java canu cassiopee cat-bat cclib cct cd-hit cdbfasta centrifuge cgview chado-utils changeo chemical-mime-data chimeraslayer chromhmm chromimpute cif-tools circlator circos circos-tools clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx cnvkit codonw coinor-cbc coinor-libcbc3 coinor-libcgl1 coinor-libclp1 coinor-libcoinutils3v5 coinor-libosi1v5 comet-ms concavity conservation-code covtobed cpp cpp-12 crac csb curl cutadapt cutesv cwl-upgrader cwltool cython3 daligner damapper dascrubber datamash dawg dazzdb dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service debhelper default-jdk default-jdk-headless default-jre default-jre-headless delly density-fitness dextractor dh-autoreconf dh-strip-nondeterminism dialign dialign-tx dialign-tx-data diamond-aligner dictionaries-common dirmngr discosnp disulfinder disulfinder-data dmidecode dmsetup dnaclust dnarrange docbook-xml docutils-common dotter dpkg-dev drop-seq-tools dssp dvipng dvisvgm dwgsim dwz e-mem ea-utils ecopcr edtsurf eigensoft elph emacsen-common embassy-domainatrix embassy-domalign embassy-domsearch emboss emboss-data emboss-lib emmax enchant-2 epstool estscan examl exonerate f2j fakeroot fasta3 fastahack fastani fastaq fastdnaml fastjar fastlink fastml fastp fastq-pair fastqc fastqtl fasttree fftw-dev fftw2 figtree file filtlong fitgcp flash flexbar flye fml-asm fontconfig fontconfig-config fonts-circos-symbols fonts-cmu fonts-dejavu fonts-dejavu-core fonts-dejavu-extra fonts-droid-fallback fonts-font-awesome fonts-freefont-otf fonts-freefont-ttf fonts-gfs-baskerville fonts-gfs-porson fonts-glyphicons-halflings fonts-lato fonts-liberation fonts-liberation2 fonts-lmodern fonts-lyx fonts-mathjax fonts-noto-color-emoji fonts-noto-mono fonts-texgyre fonts-texgyre-math fonts-urw-base35 freebayes freecontact fsa fsm-lite fuse3 g++ g++-12 gamgi garli garlic gasic gatb-core gawk gbrowse gcc gcc-12 gdal-data gdal-plugins gdb gdpc gedit gedit-common gemma genometester genomethreader genometools genometools-common genomicsdb-tools gentle geoclue-2.0 gettext gettext-base gff2aplot gff2ps gffread gfortran gfortran-12 ggd-utils ghemical ghmm ghostscript gir1.2-atk-1.0 gir1.2-freedesktop gir1.2-gdkpixbuf-2.0 gir1.2-glib-2.0 gir1.2-gtk-3.0 gir1.2-gtksource-4 gir1.2-harfbuzz-0.0 gir1.2-pango-1.0 gir1.2-peas-1.0 git git-man glam2 glib-networking glib-networking-common glib-networking-services gmap gnupg gnupg-l10n gnupg-utils gnuplot gnuplot-data gnuplot-qt gnustep-base-common gnustep-base-runtime gnustep-common gnustep-make gobjc gobjc-12 goby-java gpg gpg-agent gpg-wks-client gpg-wks-server gpgconf gpgsm grabix graphlan graphviz grinder groff-base 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kineticstools-data king-probe kissplice kleborate kma kmc kmer kmer-examples kmerresistance kraken kraken2 krb5-locales ksh ksh93u+m lagan lamarc lamassemble lambda-align lambda-align2 laptop-detect last-align lastz leaff lefse less lib32gcc-s1 lib32stdc++6 libaa1 libaacs0 libabsl20220623 libace-perl libactivation-java libaec-dev libaec0 libai-fann-perl libalglib3.19 libalgorithm-c3-perl libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libalgorithm-munkres-perl libalgorithm-svm-perl libamd2 libamtk-5-0 libamtk-5-common libandroid-json-org-java libann0 libantlr-java libantlr3-runtime-java libantlr4-runtime-java libany-uri-escape-perl libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl libaom3 libaopalliance-java libapache-dbi-perl libapache-logformat-compiler-perl libapache-mime4j-java libapache-pom-java libapache2-mod-perl2 libapache2-reload-perl libapbs3 libapfloat-java libapiguardian-java libapparmor1 libappconfig-perl libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libarchive-cpio-perl libarchive-zip-perl libarchive13 libargon2-1 libargs4j-java libargtable2-0 libarmadillo11 libarpack2 libarray-compare-perl libarray-utils-perl libasa-perl libasan8 libasm-java libasound2 libasound2-data libaspell15 libass9 libassuan0 libasync-interrupt-perl libasyncns0 libatinject-jsr330-api-java libatk-bridge2.0-0 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatlas3-base libatm1 libatomic1 libatspi2.0-0 libauthen-sasl-perl libavahi-client3 libavahi-common-data libavahi-common3 libavahi-core7 libavahi-glib1 libavc1394-0 libavcodec59 libavfilter8 libavformat59 libavif15 libavogadro-data libavogadro2-1 libavutil57 libaxis-java libb-hooks-endofscope-perl libb-hooks-op-check-perl libb2-1 libbabeltrace1 libball1.5 libball1.5-data libballview1.5 libbambamc-dev libbambamc0 libbamtools-dev libbamtools2.5.2 libbarclay-java libbatik-java libbdplus0 libbeam-java libbenchmark1debian libberkeleydb-perl libbetter-appframework-java libbigwig-dev libbigwig0 libbinutils libbio-alignio-stockholm-perl libbio-asn1-entrezgene-perl libbio-chado-schema-perl libbio-cluster-perl libbio-coordinate-perl libbio-das-lite-perl libbio-db-biofetch-perl libbio-db-embl-perl libbio-db-gff-perl libbio-db-hts-perl libbio-db-ncbihelper-perl libbio-db-seqfeature-perl libbio-eutilities-perl libbio-featureio-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbio-perl-perl libbio-perl-run-perl libbio-primerdesigner-perl libbio-samtools-perl libbio-scf-perl libbio-searchio-hmmer-perl libbio-tools-phylo-paml-perl libbio-tools-run-alignment-clustalw-perl libbio-tools-run-alignment-tcoffee-perl libbio-tools-run-remoteblast-perl libbio-variation-perl libbiococoa-dev libbiococoa2 libbiojava-java libbiojava1.9-java libbiojava4-java libbiojava4.0-java libbiojava6-java libbioparser-dev libbiosoup-dev libbit-vector-perl libblas-dev libblas3 libblasr-dev libblasr5.3.5 libblosc1 libbluray2 libboost-atomic1.74.0 libboost-chrono1.74.0 libboost-dev libboost-filesystem1.74-dev libboost-filesystem1.74.0 libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-math1.74.0 libboost-mpi1.74.0 libboost-program-options1.74.0 libboost-python1.74.0 libboost-random1.74.0 libboost-regex-dev libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74.0 libboost-system1.74-dev libboost-system1.74.0 libboost-thread1.74.0 libboost-timer1.74.0 libboost1.74-dev libbpf1 libbpp-core-dev libbpp-core4 libbpp-phyl-dev libbpp-phyl-omics-dev libbpp-phyl-omics3 libbpp-phyl12 libbpp-popgen-dev libbpp-popgen8 libbpp-qt-dev libbpp-qt2 libbpp-raa-dev libbpp-raa4 libbpp-seq-dev libbpp-seq-omics-dev libbpp-seq-omics3 libbpp-seq12 libbrotli-dev libbrotli1 libbs2b0 libbsd-resource-perl libbsd0 libbsf-java libbtf1 libbwa-dev libbytecode-java libbz2-dev libc-ares2 libc-dev-bin libc-devtools libc6-dbg libc6-dev libc6-i386 libcaca0 libcache-cache-perl libcaf-openmpi-3 libcairo-gobject2 libcairo-perl libcairo2 libcamd2 libcap2-bin libcapnp-0.9.2 libcapture-tiny-perl libcarp-always-perl libcarp-clan-perl libcassie1v5 libcastor-core-java libcastor-xml-java libcbf1 libcbor0.8 libcc1-0 libccolamd2 libccp4-data libccp4-dev libccp4c0 libccp4f0 libcdi-api-java libcdk-java libcdparanoia0 libcdt5 libcereal-dev libcfitsio10 libcgi-compile-perl libcgi-emulate-psgi-perl libcgi-fast-perl libcgi-pm-perl libcgi-session-perl libcglib-java libcgraph6 libchado-perl libcharls2 libcharts4j-java libcholmod3 libchromaprint1 libcifpp-data libcifpp-dev libcifpp5 libciftools-java libcjson1 libclang-common-15-dev libclang-cpp14 libclang-cpp15 libclass-accessor-chained-perl libclass-accessor-grouped-perl libclass-accessor-perl libclass-autoloadcan-perl libclass-autouse-perl libclass-base-perl libclass-c3-componentised-perl libclass-c3-perl libclass-c3-xs-perl libclass-data-inheritable-perl libclass-dbi-abstractsearch-perl libclass-dbi-pager-perl libclass-dbi-perl libclass-dbi-pg-perl libclass-inspector-perl libclass-load-perl libclass-load-xs-perl libclass-makemethods-perl libclass-method-modifiers-perl libclass-singleton-perl libclass-tiny-perl libclass-trigger-perl libclass-xsaccessor-perl libclc-15 libclc-15-dev libclipper-dev libclipper2 libclone-choose-perl libclone-perl libclone-pp-perl libcmlxom-java libcneartree7 libcoarrays-dev libcoarrays-openmpi-dev libcodec2-1.0 libcodemodel-java libcolamd2 libcolord2 libcolt-free-java libcombblas1.16.0 libcommon-sense-perl libcommons-beanutils-java libcommons-cli-java libcommons-codec-java libcommons-collections3-java libcommons-collections4-java libcommons-compress-java libcommons-configuration-java libcommons-dbcp-java libcommons-digester-java libcommons-discovery-java libcommons-exec-java libcommons-httpclient-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-lang3-java libcommons-logging-java libcommons-math-java libcommons-math3-java libcommons-net-java libcommons-parent-java 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sim4 sim4db simka simkamin ska skesa skewer smalt smithwaterman smrtanalysis snakemake snap snap-aligner sniffles snp-sites snpeff snpomatic snpsift soapaligner soapdenovo soapdenovo2 soapsnp sortmerna source-highlight spaced spades spaln spaln-data sphinx-common sphinx-rtd-theme-common spoa sprai spread-phy sqlite3 squizz sra-toolkit srst2 ssake sse4.2-support ssl-cert sspace ssw-align stacks staden staden-common staden-io-lib-utils stringtie subread suitename sumaclust sumatra sumtrees surankco surpyvor survivor svim swarm sweed swi-prolog swi-prolog-core swi-prolog-core-packages swi-prolog-doc swi-prolog-nox swi-prolog-x swig swig4.0 sysstat systemd systemd-sysv systemd-timesyncd t-coffee t1utils tabix tantan tasksel tasksel-data tcl tcl8.6 tcllib tcsh teckit terraphast tex-common tex-gyre texinfo texlive-base texlive-bibtex-extra texlive-binaries texlive-fonts-recommended texlive-lang-greek texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures texlive-plain-generic texlive-science texlive-xetex theseus thesias tiddit tigr-glimmer time timgm6mb-soundfont tipa tk tk8.6 tk8.6-blt2.5 tklib tm-align tnseq-transit toil tombo tophat-recondition topp toppred tortoize trace2dbest tracetuner transdecoder transrate-tools transtermhp tree-puzzle tree-puzzle-doc treeview treeviewx trf trim-galore trimmomatic ttf-bitstream-vera tvc twopaco uc-echo ucf udev uil umap-learn umis uncalled unicode-data unicycler unicycler-data unikmer unixodbc-common unzip usb-modeswitch usb-modeswitch-data uuid-dev va-driver-all varna vcfanno vcftools vdpau-driver-all velocity velvet velvetoptimiser vim vim-addon-manager vim-common vim-runtime virulencefinder vmatch vsearch vt w3c-sgml-lib wget wham-align wigeon wise wise-data wpasupplicant x11-common x11-utils x11-xserver-utils x11proto-dev xauth xdg-dbus-proxy xdg-desktop-portal xdg-desktop-portal-gtk xdg-user-dirs xdg-utils xfonts-100dpi xfonts-encodings xfonts-utils xkb-data xml-core xorg-sgml-doctools xpore xsltproc xtrans-dev xxd xz-utils yaha yanagiba yanosim yelp yelp-xsl zenity zenity-common zip zlib1g-dev zutty 0 upgraded, 4328 newly installed, 0 to remove and 0 not upgraded. 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Get:1 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.11-1~deb12u2 [2019 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libargon2-1 amd64 0~20171227-0.3+deb12u1 [19.4 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 dmsetup amd64 2:1.02.185-2 [82.0 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 libdevmapper1.02.1 amd64 2:1.02.185-2 [133 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 libjson-c5 amd64 0.16-2 [44.1 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 libcryptsetup12 amd64 2:2.6.1-4~deb12u2 [223 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 libfdisk1 amd64 2.38.1-5+b1 [194 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 libkmod2 amd64 30+20221128-1 [57.9 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libapparmor1 amd64 3.0.8-3 [41.2 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 libip4tc2 amd64 1.8.9-2 [19.0 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 libsystemd-shared amd64 252.22-1~deb12u1 [1691 kB] Get:12 http://deb.debian.org/debian bookworm/main amd64 systemd amd64 252.22-1~deb12u1 [3032 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 systemd-sysv amd64 252.22-1~deb12u1 [41.9 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 libdbus-1-3 amd64 1.14.10-1~deb12u1 [201 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 dbus-bin amd64 1.14.10-1~deb12u1 [105 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 dbus-session-bus-common all 1.14.10-1~deb12u1 [78.2 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 dbus-daemon amd64 1.14.10-1~deb12u1 [184 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 dbus-system-bus-common all 1.14.10-1~deb12u1 [79.3 kB] Get:20 http://deb.debian.org/debian bookworm/main amd64 dbus amd64 1.14.10-1~deb12u1 [97.4 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 perl-modules-5.36 all 5.36.0-7+deb12u1 [2815 kB] Get:22 http://deb.debian.org/debian bookworm/main amd64 libgdbm6 amd64 1.23-3 [72.2 kB] Get:23 http://deb.debian.org/debian bookworm/main amd64 libgdbm-compat4 amd64 1.23-3 [48.2 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 libperl5.36 amd64 5.36.0-7+deb12u1 [4218 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 perl amd64 5.36.0-7+deb12u1 [239 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 libapr1 amd64 1.7.2-3 [102 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 libaprutil1 amd64 1.6.3-1 [87.8 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.40.1-2 [837 kB] Get:29 http://deb.debian.org/debian bookworm/main amd64 libaprutil1-dbd-sqlite3 amd64 1.6.3-1 [13.6 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get:31 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 libaprutil1-ldap amd64 1.6.3-1 [11.8 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-2+deb12u1 [32.4 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-2+deb12u1 [78.9 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:38 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-2+deb12u1 [332 kB] Get:39 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-2+deb12u1 [134 kB] Get:40 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1+deb12u1 [72.4 kB] Get:41 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get:42 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:43 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:44 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-10+deb12u5 [390 kB] Get:45 http://deb.debian.org/debian bookworm/main amd64 libjansson4 amd64 2.14-2 [40.8 kB] Get:46 http://deb.debian.org/debian bookworm/main amd64 liblua5.3-0 amd64 5.3.6-2 [123 kB] Get:47 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:48 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.3~deb12u1 [687 kB] Get:49 http://deb.debian.org/debian bookworm/main amd64 apache2-bin amd64 2.4.57-2 [1364 kB] Get:50 http://deb.debian.org/debian bookworm/main amd64 apache2-data all 2.4.57-2 [160 kB] Get:51 http://deb.debian.org/debian bookworm/main amd64 apache2-utils amd64 2.4.57-2 [202 kB] Get:52 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get:53 http://deb.debian.org/debian bookworm/main amd64 libncursesw6 amd64 6.4-4 [134 kB] Get:54 http://deb.debian.org/debian bookworm/main amd64 libproc2-0 amd64 2:4.0.2-3 [62.8 kB] Get:55 http://deb.debian.org/debian bookworm/main amd64 procps amd64 2:4.0.2-3 [709 kB] Get:56 http://deb.debian.org/debian bookworm/main amd64 apache2 amd64 2.4.57-2 [215 kB] Get:57 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:58 http://deb.debian.org/debian bookworm/main amd64 binfmt-support amd64 2.2.2-2 [64.0 kB] Get:59 http://deb.debian.org/debian bookworm/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1807 kB] Get:60 http://deb.debian.org/debian bookworm/main amd64 fonts-lato all 2.0-2.1 [2696 kB] Get:61 http://deb.debian.org/debian bookworm/main amd64 libmpfr6 amd64 4.2.0-1 [701 kB] Get:62 http://deb.debian.org/debian bookworm/main amd64 install-info amd64 6.8-6+b1 [171 kB] Get:63 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:64 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:65 http://deb.debian.org/debian bookworm/main amd64 libsigsegv2 amd64 2.14-1 [37.2 kB] Get:66 http://deb.debian.org/debian bookworm/main amd64 gawk amd64 1:5.2.1-2 [673 kB] Get:67 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get:68 http://deb.debian.org/debian bookworm/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:69 http://deb.debian.org/debian bookworm/main amd64 libdebuginfod-common all 0.188-2.1 [21.5 kB] Get:70 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:71 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] Get:72 http://deb.debian.org/debian bookworm/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB] Get:73 http://deb.debian.org/debian bookworm/main amd64 libgomp1 amd64 12.2.0-14 [116 kB] Get:74 http://deb.debian.org/debian bookworm/main amd64 libfftw3-double3 amd64 3.3.10-1 [776 kB] Get:75 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get:76 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-5 [399 kB] Get:77 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get:78 http://deb.debian.org/debian bookworm/main amd64 ttf-bitstream-vera all 1.10-8.2 [223 kB] Get:79 http://deb.debian.org/debian bookworm/main amd64 fonts-liberation all 1:1.07.4-11 [828 kB] Get:80 http://deb.debian.org/debian bookworm/main amd64 fonts-liberation2 all 2.1.5-1 [1479 kB] Get:81 http://deb.debian.org/debian bookworm/main amd64 fonts-freefont-otf all 20120503-10 [3171 kB] Get:82 http://deb.debian.org/debian bookworm/main amd64 fonts-freefont-ttf all 20120503-10 [2552 kB] Get:83 http://deb.debian.org/debian bookworm/main amd64 libfontenc1 amd64 1:1.1.4-1 [24.3 kB] Get:84 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get:85 http://deb.debian.org/debian bookworm/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get:86 http://deb.debian.org/debian bookworm/main amd64 xfonts-utils amd64 1:7.7+6 [93.0 kB] Get:87 http://deb.debian.org/debian bookworm/main amd64 fonts-urw-base35 all 20200910-7 [10.8 MB] Get:88 http://deb.debian.org/debian bookworm/main amd64 fonts-texgyre all 20180621-6 [8211 kB] Get:89 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get:90 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get:91 http://deb.debian.org/debian bookworm/main amd64 libaom3 amd64 3.6.0-1 [1851 kB] Get:92 http://deb.debian.org/debian bookworm/main amd64 libdav1d6 amd64 1.0.0-2 [495 kB] Get:93 http://deb.debian.org/debian bookworm/main amd64 libde265-0 amd64 1.0.11-1+deb12u2 [185 kB] Get:94 http://deb.debian.org/debian bookworm/main amd64 libnuma1 amd64 2.0.16-1 [21.0 kB] Get:95 http://deb.debian.org/debian bookworm/main amd64 libx265-199 amd64 3.5-2+b1 [1150 kB] Get:96 http://deb.debian.org/debian bookworm/main amd64 libheif1 amd64 1.15.1-1 [215 kB] Get:97 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get:98 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get:99 http://deb.debian.org/debian bookworm/main amd64 liblcms2-2 amd64 2.14-2 [154 kB] Get:100 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-2 [1398 kB] Get:101 http://deb.debian.org/debian bookworm/main amd64 liblqr-1-0 amd64 0.4.2-2.1 [29.1 kB] Get:102 http://deb.debian.org/debian bookworm/main amd64 libltdl7 amd64 2.4.7-5 [393 kB] Get:103 http://deb.debian.org/debian bookworm/main amd64 libopenjp2-7 amd64 2.5.0-2 [189 kB] Get:104 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get:105 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get:106 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.2+deb12u1 [286 kB] Get:107 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-6+deb12u1 [316 kB] Get:108 http://deb.debian.org/debian bookworm/main amd64 libwebpdemux2 amd64 1.2.4-0.2+deb12u1 [99.4 kB] Get:109 http://deb.debian.org/debian bookworm/main amd64 libwebpmux3 amd64 1.2.4-0.2+deb12u1 [109 kB] Get:110 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:111 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get:112 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:113 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:114 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2+deb12u2 [292 kB] Get:115 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2+deb12u2 [760 kB] Get:116 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:117 http://deb.debian.org/debian bookworm/main amd64 imagemagick-6-common all 8:6.9.11.60+dfsg-1.6 [165 kB] Get:118 http://deb.debian.org/debian bookworm/main amd64 libmagickcore-6.q16-6 amd64 8:6.9.11.60+dfsg-1.6 [1781 kB] Get:119 http://deb.debian.org/debian bookworm/main amd64 libmagickwand-6.q16-6 amd64 8:6.9.11.60+dfsg-1.6 [408 kB] Get:120 http://deb.debian.org/debian bookworm/main amd64 libmotif-common all 2.3.8-3 [40.5 kB] Get:121 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get:122 http://deb.debian.org/debian bookworm/main amd64 libxft2 amd64 2.3.6-1 [61.8 kB] Get:123 http://deb.debian.org/debian bookworm/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get:124 http://deb.debian.org/debian bookworm/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:125 http://deb.debian.org/debian bookworm/main amd64 libxt6 amd64 1:1.2.1-1.1 [186 kB] Get:126 http://deb.debian.org/debian bookworm/main amd64 libxmu6 amd64 2:1.1.3-3 [60.1 kB] Get:127 http://deb.debian.org/debian bookworm/main amd64 libxm4 amd64 2.3.8-3 [1034 kB] Get:128 http://deb.debian.org/debian bookworm/main amd64 libmrm4 amd64 2.3.8-3 [88.7 kB] Get:129 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get:130 http://deb.debian.org/debian bookworm/main amd64 libdw1 amd64 0.188-2.1 [235 kB] Get:131 http://deb.debian.org/debian bookworm/main amd64 libunwind8 amd64 1.6.2-3 [51.2 kB] Get:132 http://deb.debian.org/debian bookworm/main amd64 libcap2-bin amd64 1:2.66-4 [34.7 kB] Get:133 http://deb.debian.org/debian bookworm/main amd64 libgstreamer1.0-0 amd64 1.22.0-2 [1169 kB] Get:134 http://deb.debian.org/debian bookworm/main amd64 liborc-0.4-0 amd64 1:0.4.33-2 [164 kB] Get:135 http://deb.debian.org/debian bookworm/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get:136 http://deb.debian.org/debian bookworm/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.22.0-3+deb12u1 [934 kB] Get:137 http://deb.debian.org/debian bookworm/main amd64 libhyphen0 amd64 2.8.8-7 [32.5 kB] Get:138 http://deb.debian.org/debian bookworm/main amd64 shared-mime-info amd64 2.2-1 [729 kB] Get:139 http://deb.debian.org/debian bookworm/main amd64 libdouble-conversion3 amd64 3.2.1-1 [41.5 kB] Get:140 http://deb.debian.org/debian bookworm/main amd64 libpcre2-16-0 amd64 10.42-1 [245 kB] Get:141 http://deb.debian.org/debian bookworm/main amd64 libqt5core5a amd64 5.15.8+dfsg-11 [1809 kB] Get:142 http://deb.debian.org/debian bookworm/main amd64 fontconfig amd64 2.14.1-4 [449 kB] Get:143 http://deb.debian.org/debian bookworm/main amd64 libdrm-common all 2.4.114-1 [7112 B] Get:144 http://deb.debian.org/debian bookworm/main amd64 libdrm2 amd64 2.4.114-1+b1 [37.5 kB] Get:145 http://deb.debian.org/debian bookworm/main amd64 libglvnd0 amd64 1.6.0-1 [51.8 kB] Get:146 http://deb.debian.org/debian bookworm/main amd64 libwayland-server0 amd64 1.21.0-1 [35.9 kB] Get:147 http://deb.debian.org/debian bookworm/main amd64 libgbm1 amd64 22.3.6-1+deb12u1 [38.0 kB] Get:148 http://deb.debian.org/debian bookworm/main amd64 libglapi-mesa amd64 22.3.6-1+deb12u1 [35.7 kB] Get:149 http://deb.debian.org/debian bookworm/main amd64 libwayland-client0 amd64 1.21.0-1 [28.3 kB] Get:150 http://deb.debian.org/debian bookworm/main amd64 libx11-xcb1 amd64 2:1.8.4-2+deb12u2 [192 kB] Get:151 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri2-0 amd64 1.15-1 [107 kB] Get:152 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri3-0 amd64 1.15-1 [107 kB] Get:153 http://deb.debian.org/debian bookworm/main amd64 libxcb-present0 amd64 1.15-1 [105 kB] Get:154 http://deb.debian.org/debian bookworm/main amd64 libxcb-randr0 amd64 1.15-1 [117 kB] Get:155 http://deb.debian.org/debian bookworm/main amd64 libxcb-sync1 amd64 1.15-1 [109 kB] Get:156 http://deb.debian.org/debian bookworm/main amd64 libxcb-xfixes0 amd64 1.15-1 [109 kB] Get:157 http://deb.debian.org/debian bookworm/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get:158 http://deb.debian.org/debian bookworm/main amd64 libegl-mesa0 amd64 22.3.6-1+deb12u1 [114 kB] Get:159 http://deb.debian.org/debian bookworm/main amd64 libegl1 amd64 1.6.0-1 [33.7 kB] Get:160 http://deb.debian.org/debian bookworm/main amd64 libxcb-glx0 amd64 1.15-1 [122 kB] Get:161 http://deb.debian.org/debian bookworm/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get:162 http://deb.debian.org/debian bookworm/main amd64 libxfixes3 amd64 1:6.0.0-2 [22.7 kB] Get:163 http://deb.debian.org/debian bookworm/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:164 http://deb.debian.org/debian bookworm/main amd64 libdrm-amdgpu1 amd64 2.4.114-1+b1 [20.9 kB] Get:165 http://deb.debian.org/debian bookworm/main amd64 libpciaccess0 amd64 0.17-2 [51.4 kB] Get:166 http://deb.debian.org/debian bookworm/main amd64 libdrm-intel1 amd64 2.4.114-1+b1 [64.0 kB] Get:167 http://deb.debian.org/debian bookworm/main amd64 libdrm-nouveau2 amd64 2.4.114-1+b1 [19.1 kB] Get:168 http://deb.debian.org/debian bookworm/main amd64 libdrm-radeon1 amd64 2.4.114-1+b1 [21.8 kB] Get:169 http://deb.debian.org/debian bookworm/main amd64 libedit2 amd64 3.1-20221030-2 [93.0 kB] Get:170 http://deb.debian.org/debian bookworm/main amd64 libz3-4 amd64 4.8.12-3.1 [7216 kB] Get:171 http://deb.debian.org/debian bookworm/main amd64 libllvm15 amd64 1:15.0.6-4+b1 [23.1 MB] Get:172 http://deb.debian.org/debian bookworm/main amd64 libsensors-config all 1:3.6.0-7.1 [14.3 kB] Get:173 http://deb.debian.org/debian bookworm/main amd64 libsensors5 amd64 1:3.6.0-7.1 [34.2 kB] Get:174 http://deb.debian.org/debian bookworm/main amd64 libgl1-mesa-dri amd64 22.3.6-1+deb12u1 [7239 kB] Get:175 http://deb.debian.org/debian bookworm/main amd64 libglx-mesa0 amd64 22.3.6-1+deb12u1 [147 kB] Get:176 http://deb.debian.org/debian bookworm/main amd64 libglx0 amd64 1.6.0-1 [34.4 kB] Get:177 http://deb.debian.org/debian bookworm/main amd64 libgl1 amd64 1.6.0-1 [88.4 kB] Get:178 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:179 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0+dfsg-3 [1945 kB] Get:180 http://deb.debian.org/debian bookworm/main amd64 libevdev2 amd64 1.13.0+dfsg-1 [34.0 kB] Get:181 http://deb.debian.org/debian bookworm/main amd64 libmtdev1 amd64 1.1.6-1 [23.0 kB] Get:182 http://deb.debian.org/debian bookworm/main amd64 libgudev-1.0-0 amd64 237-2 [15.1 kB] Get:183 http://deb.debian.org/debian bookworm/main amd64 libwacom-common all 2.6.0-1 [58.4 kB] Get:184 http://deb.debian.org/debian bookworm/main amd64 libwacom9 amd64 2.6.0-1 [21.5 kB] Get:185 http://deb.debian.org/debian bookworm/main amd64 libinput-bin amd64 1.22.1-1 [23.2 kB] Get:186 http://deb.debian.org/debian bookworm/main amd64 libinput10 amd64 1.22.1-1 [125 kB] Get:187 http://deb.debian.org/debian bookworm/main amd64 libmd4c0 amd64 0.4.8-1 [44.2 kB] Get:188 http://deb.debian.org/debian bookworm/main amd64 libqt5dbus5 amd64 5.15.8+dfsg-11 [211 kB] Get:189 http://deb.debian.org/debian bookworm/main amd64 libqt5network5 amd64 5.15.8+dfsg-11 [674 kB] Get:190 http://deb.debian.org/debian bookworm/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [27.4 kB] Get:191 http://deb.debian.org/debian bookworm/main amd64 libxcb-util1 amd64 0.4.0-1+b1 [23.2 kB] Get:192 http://deb.debian.org/debian bookworm/main amd64 libxcb-image0 amd64 0.4.0-2 [22.9 kB] Get:193 http://deb.debian.org/debian bookworm/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b2 [16.4 kB] Get:194 http://deb.debian.org/debian bookworm/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get:195 http://deb.debian.org/debian bookworm/main amd64 libxcb-render-util0 amd64 0.3.9-1+b1 [18.3 kB] Get:196 http://deb.debian.org/debian bookworm/main amd64 libxcb-shape0 amd64 1.15-1 [106 kB] Get:197 http://deb.debian.org/debian bookworm/main amd64 libxcb-xinerama0 amd64 1.15-1 [105 kB] Get:198 http://deb.debian.org/debian bookworm/main amd64 libxcb-xinput0 amd64 1.15-1 [130 kB] Get:199 http://deb.debian.org/debian bookworm/main amd64 libxcb-xkb1 amd64 1.15-1 [129 kB] Get:200 http://deb.debian.org/debian bookworm/main amd64 xkb-data all 2.35.1-1 [764 kB] Get:201 http://deb.debian.org/debian bookworm/main amd64 libxkbcommon0 amd64 1.5.0-1 [106 kB] Get:202 http://deb.debian.org/debian bookworm/main amd64 libxkbcommon-x11-0 amd64 1.5.0-1 [15.6 kB] Get:203 http://deb.debian.org/debian bookworm/main amd64 libqt5gui5 amd64 5.15.8+dfsg-11 [3408 kB] Get:204 http://deb.debian.org/debian bookworm/main amd64 libqt5positioning5 amd64 5.15.8+dfsg-3+deb12u1 [203 kB] Get:205 http://deb.debian.org/debian bookworm/main amd64 libavahi-common-data amd64 0.8-10 [107 kB] Get:206 http://deb.debian.org/debian bookworm/main amd64 libavahi-common3 amd64 0.8-10 [41.6 kB] Get:207 http://deb.debian.org/debian bookworm/main amd64 libavahi-client3 amd64 0.8-10 [45.5 kB] Get:208 http://deb.debian.org/debian bookworm/main amd64 libcups2 amd64 2.4.2-3+deb12u5 [245 kB] Get:209 http://deb.debian.org/debian bookworm/main amd64 libqt5widgets5 amd64 5.15.8+dfsg-11 [2383 kB] Get:210 http://deb.debian.org/debian bookworm/main amd64 libqt5printsupport5 amd64 5.15.8+dfsg-11 [202 kB] Get:211 http://deb.debian.org/debian bookworm/main amd64 libqt5qml5 amd64 5.15.8+dfsg-3 [1356 kB] Get:212 http://deb.debian.org/debian bookworm/main amd64 libqt5qmlmodels5 amd64 5.15.8+dfsg-3 [189 kB] Get:213 http://deb.debian.org/debian bookworm/main amd64 libqt5quick5 amd64 5.15.8+dfsg-3 [1592 kB] Get:214 http://deb.debian.org/debian bookworm/main amd64 libqt5sensors5 amd64 5.15.8-2 [112 kB] Get:215 http://deb.debian.org/debian bookworm/main amd64 libqt5webchannel5 amd64 5.15.8-2 [58.2 kB] Get:216 http://deb.debian.org/debian bookworm/main amd64 libwoff1 amd64 1.0.2-2 [43.0 kB] Get:217 http://deb.debian.org/debian bookworm/main amd64 libxslt1.1 amd64 1.1.35-1 [242 kB] Get:218 http://deb.debian.org/debian bookworm/main amd64 libqt5webkit5 amd64 5.212.0~alpha4-30 [11.9 MB] Get:219 http://deb.debian.org/debian bookworm/main amd64 libuil4 amd64 2.3.8-3 [158 kB] Get:220 http://deb.debian.org/debian bookworm/main amd64 libboost-filesystem1.74.0 amd64 1.74.0+ds1-21 [258 kB] Get:221 http://deb.debian.org/debian bookworm/main amd64 libboost-regex1.74.0 amd64 1.74.0+ds1-21 [487 kB] Get:222 http://deb.debian.org/debian bookworm/main amd64 libboost-thread1.74.0 amd64 1.74.0+ds1-21 [257 kB] Get:223 http://deb.debian.org/debian bookworm/main amd64 mira-assembler amd64 4.9.6-7+b2 [2436 kB] Get:224 http://deb.debian.org/debian bookworm/main amd64 mira-rfam-12s-rrna all 4.9.6-7 [10.4 MB] Get:225 http://deb.debian.org/debian bookworm/main amd64 pigz amd64 2.6-1 [64.0 kB] Get:226 http://deb.debian.org/debian bookworm/main amd64 poppler-data all 0.4.12-1 [1601 kB] Get:227 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB] Get:228 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB] Get:229 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get:230 http://deb.debian.org/debian bookworm/main amd64 mailcap all 3.70+nmu1 [32.0 kB] Get:231 http://deb.debian.org/debian bookworm/main amd64 mime-support all 3.66 [10.9 kB] Get:232 http://deb.debian.org/debian bookworm/main amd64 libtirpc-common all 1.3.3+ds-1 [14.0 kB] Get:233 http://deb.debian.org/debian bookworm/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB] Get:234 http://deb.debian.org/debian bookworm/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:235 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB] Get:236 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB] Get:237 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get:238 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get:239 http://deb.debian.org/debian bookworm/main amd64 sgml-base all 1.31 [15.4 kB] Get:240 http://deb.debian.org/debian bookworm/main amd64 isa-support amd64 15.1 [9172 B] Get:241 http://deb.debian.org/debian bookworm/main amd64 sse4.2-support amd64 15.1 [3320 B] Get:242 http://deb.debian.org/debian bookworm/main amd64 tasksel-data all 3.73 [18.0 kB] Get:243 http://deb.debian.org/debian bookworm/main amd64 tasksel all 3.73 [51.2 kB] Get:244 http://deb.debian.org/debian bookworm/main amd64 dmidecode amd64 3.4-1 [68.8 kB] Get:245 http://deb.debian.org/debian bookworm/main amd64 libbpf1 amd64 1:1.1.0-1 [145 kB] Get:246 http://deb.debian.org/debian bookworm/main amd64 libmnl0 amd64 1.0.4-3 [12.5 kB] Get:247 http://deb.debian.org/debian bookworm/main amd64 libxtables12 amd64 1.8.9-2 [30.8 kB] Get:248 http://deb.debian.org/debian bookworm/main amd64 iproute2 amd64 6.1.0-3 [1046 kB] Get:249 http://deb.debian.org/debian bookworm/main amd64 less amd64 590-2 [131 kB] Get:250 http://deb.debian.org/debian bookworm/main amd64 netbase all 6.4 [12.8 kB] Get:251 http://deb.debian.org/debian bookworm/main amd64 udev amd64 252.22-1~deb12u1 [1662 kB] Get:252 http://deb.debian.org/debian bookworm/main amd64 vim-common all 2:9.0.1378-2 [124 kB] Get:253 http://deb.debian.org/debian bookworm/main amd64 bash-completion all 1:2.11-6 [234 kB] Get:254 http://deb.debian.org/debian bookworm/main amd64 bzip2 amd64 1.0.8-5+b1 [49.8 kB] Get:255 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.11-1~deb12u2 [1419 kB] Get:256 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20230311 [153 kB] Get:257 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get:258 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get:259 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB] Get:260 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB] Get:261 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:262 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get:263 http://deb.debian.org/debian bookworm/main amd64 krb5-locales all 1.20.1-2+deb12u1 [62.7 kB] Get:264 http://deb.debian.org/debian bookworm/main amd64 libnss-systemd amd64 252.22-1~deb12u1 [163 kB] Get:265 http://deb.debian.org/debian bookworm/main amd64 libpam-systemd amd64 252.22-1~deb12u1 [225 kB] Get:266 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get:267 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get:268 http://deb.debian.org/debian bookworm/main amd64 manpages all 6.03-2 [1332 kB] Get:269 http://deb.debian.org/debian bookworm/main amd64 libcbor0.8 amd64 0.8.0-2+b1 [27.4 kB] Get:270 http://deb.debian.org/debian bookworm/main amd64 libfido2-1 amd64 1.12.0-2+b1 [77.2 kB] Get:271 http://deb.debian.org/debian bookworm/main amd64 openssh-client amd64 1:9.2p1-2+deb12u2 [990 kB] Get:272 http://deb.debian.org/debian bookworm/main amd64 systemd-timesyncd amd64 252.22-1~deb12u1 [63.1 kB] Get:273 http://deb.debian.org/debian bookworm/main amd64 wget amd64 1.21.3-1+b2 [984 kB] Get:274 http://deb.debian.org/debian bookworm/main amd64 xz-utils amd64 5.4.1-0.2 [471 kB] Get:275 http://deb.debian.org/debian bookworm/main amd64 mummer amd64 3.23+dfsg-8 [662 kB] Get:276 http://deb.debian.org/debian bookworm/main amd64 abacas all 1.3.1-9 [24.6 kB] Get:277 http://deb.debian.org/debian bookworm/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get:278 http://deb.debian.org/debian bookworm/main amd64 libcdt5 amd64 2.42.2-7+b3 [39.8 kB] Get:279 http://deb.debian.org/debian bookworm/main amd64 libcgraph6 amd64 2.42.2-7+b3 [63.2 kB] Get:280 http://deb.debian.org/debian bookworm/main amd64 libabsl20220623 amd64 20220623.1-1 [391 kB] Get:281 http://deb.debian.org/debian bookworm/main amd64 libgav1-1 amd64 0.18.0-1+b1 [332 kB] Get:282 http://deb.debian.org/debian bookworm/main amd64 librav1e0 amd64 0.5.1-6 [763 kB] Get:283 http://deb.debian.org/debian bookworm/main amd64 libsvtav1enc1 amd64 1.4.1+dfsg-1 [2121 kB] Get:284 http://deb.debian.org/debian bookworm/main amd64 libyuv0 amd64 0.0~git20230123.b2528b0-1 [168 kB] Get:285 http://deb.debian.org/debian bookworm/main amd64 libavif15 amd64 0.11.1-1 [93.8 kB] Get:286 http://deb.debian.org/debian bookworm/main amd64 libxpm4 amd64 1:3.5.12-1.1+deb12u1 [48.6 kB] Get:287 http://deb.debian.org/debian bookworm/main amd64 libgd3 amd64 2.3.3-9 [124 kB] Get:288 http://deb.debian.org/debian bookworm/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-5+b1 [160 kB] Get:289 http://deb.debian.org/debian bookworm/main amd64 libpixman-1-0 amd64 0.42.2-1 [546 kB] Get:290 http://deb.debian.org/debian bookworm/main amd64 libcairo2 amd64 1.16.0-7 [575 kB] Get:291 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get:292 http://deb.debian.org/debian bookworm/main amd64 libthai-data all 0.1.29-1 [176 kB] Get:293 http://deb.debian.org/debian bookworm/main amd64 libdatrie1 amd64 0.2.13-2+b1 [43.3 kB] Get:294 http://deb.debian.org/debian bookworm/main amd64 libthai0 amd64 0.1.29-1 [57.5 kB] Get:295 http://deb.debian.org/debian bookworm/main amd64 libpango-1.0-0 amd64 1.50.12+ds-1 [212 kB] Get:296 http://deb.debian.org/debian bookworm/main amd64 libpangoft2-1.0-0 amd64 1.50.12+ds-1 [47.4 kB] Get:297 http://deb.debian.org/debian bookworm/main amd64 libpangocairo-1.0-0 amd64 1.50.12+ds-1 [34.2 kB] Get:298 http://deb.debian.org/debian bookworm/main amd64 libpathplan4 amd64 2.42.2-7+b3 [42.2 kB] Get:299 http://deb.debian.org/debian bookworm/main amd64 libgvc6 amd64 2.42.2-7+b3 [678 kB] Get:300 http://deb.debian.org/debian bookworm/main amd64 libgvpr2 amd64 2.42.2-7+b3 [189 kB] Get:301 http://deb.debian.org/debian bookworm/main amd64 liblab-gamut1 amd64 2.42.2-7+b3 [198 kB] Get:302 http://deb.debian.org/debian bookworm/main amd64 libxaw7 amd64 2:1.0.14-1 [201 kB] Get:303 http://deb.debian.org/debian bookworm/main amd64 graphviz amd64 2.42.2-7+b3 [611 kB] Get:304 http://deb.debian.org/debian bookworm/main amd64 abpoa amd64 1.4.1-3+b4 [263 kB] Get:305 http://deb.debian.org/debian bookworm/main amd64 make amd64 4.3-4.1 [396 kB] Get:306 http://deb.debian.org/debian bookworm/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-8 [131 kB] Get:307 http://deb.debian.org/debian bookworm/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-8 [53.6 kB] Get:308 http://deb.debian.org/debian bookworm/main amd64 libnl-3-200 amd64 3.7.0-0.2+b1 [63.1 kB] Get:309 http://deb.debian.org/debian bookworm/main amd64 libnl-route-3-200 amd64 3.7.0-0.2+b1 [185 kB] Get:310 http://deb.debian.org/debian bookworm/main amd64 libibverbs1 amd64 44.0-2 [60.7 kB] Get:311 http://deb.debian.org/debian bookworm/main amd64 ibverbs-providers amd64 44.0-2 [335 kB] Get:312 http://deb.debian.org/debian bookworm/main amd64 libatomic1 amd64 12.2.0-14 [9328 B] Get:313 http://deb.debian.org/debian bookworm/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.2 [168 kB] Get:314 http://deb.debian.org/debian bookworm/main amd64 libpsm2-2 amd64 11.2.185-2 [180 kB] Get:315 http://deb.debian.org/debian bookworm/main amd64 librdmacm1 amd64 44.0-2 [68.6 kB] Get:316 http://deb.debian.org/debian bookworm/main amd64 libfabric1 amd64 1.17.0-3 [627 kB] Get:317 http://deb.debian.org/debian bookworm/main amd64 libhwloc15 amd64 2.9.0-1 [154 kB] Get:318 http://deb.debian.org/debian bookworm/main amd64 libmunge2 amd64 0.5.15-2 [19.5 kB] Get:319 http://deb.debian.org/debian bookworm/main amd64 libxnvctrl0 amd64 525.85.05-3~deb12u1 [13.5 kB] Get:320 http://deb.debian.org/debian bookworm/main amd64 ocl-icd-libopencl1 amd64 2.3.1-1 [43.0 kB] Get:321 http://deb.debian.org/debian bookworm/main amd64 libhwloc-plugins amd64 2.9.0-1 [17.5 kB] Get:322 http://deb.debian.org/debian bookworm/main amd64 libpmix2 amd64 4.2.2-1+deb12u1 [622 kB] Get:323 http://deb.debian.org/debian bookworm/main amd64 libucx0 amd64 1.13.1-1 [860 kB] Get:324 http://deb.debian.org/debian bookworm/main amd64 libopenmpi3 amd64 4.1.4-3+b1 [2422 kB] Get:325 http://deb.debian.org/debian bookworm/main amd64 openmpi-common all 4.1.4-3 [167 kB] Get:326 http://deb.debian.org/debian bookworm/main amd64 openmpi-bin amd64 4.1.4-3+b1 [226 kB] Get:327 http://deb.debian.org/debian bookworm/main amd64 abyss amd64 2.3.5+dfsg-2 [3191 kB] Get:328 http://deb.debian.org/debian bookworm/main amd64 acedb-other amd64 4.9.39+dfsg.02-7+b1 [18.6 kB] Get:329 http://deb.debian.org/debian bookworm/main amd64 adapterremoval amd64 2.3.3-2 [191 kB] Get:330 http://deb.debian.org/debian bookworm/main amd64 gnustep-common amd64 2.9.1-2 [111 kB] Get:331 http://deb.debian.org/debian bookworm/main amd64 gnustep-base-common all 1.28.1+really1.28.0-5 [294 kB] Get:332 http://deb.debian.org/debian bookworm/main amd64 libgc1 amd64 1:8.2.2-3 [245 kB] Get:333 http://deb.debian.org/debian bookworm/main amd64 libobjc4 amd64 12.2.0-14 [43.1 kB] Get:334 http://deb.debian.org/debian bookworm/main amd64 libgnustep-base1.28 amd64 1.28.1+really1.28.0-5 [1571 kB] Get:335 http://deb.debian.org/debian bookworm/main amd64 gnustep-base-runtime amd64 1.28.1+really1.28.0-5 [439 kB] Get:336 http://deb.debian.org/debian bookworm/main amd64 libgslcblas0 amd64 2.7.1+dfsg-5 [108 kB] Get:337 http://deb.debian.org/debian bookworm/main amd64 libgsl27 amd64 2.7.1+dfsg-5 [941 kB] Get:338 http://deb.debian.org/debian bookworm/main amd64 adun-core amd64 0.81-14+b3 [752 kB] Get:339 http://deb.debian.org/debian bookworm/main amd64 hicolor-icon-theme all 0.17-2 [11.4 kB] Get:340 http://deb.debian.org/debian bookworm/main amd64 libgdk-pixbuf2.0-common all 2.42.10+dfsg-1 [306 kB] Get:341 http://deb.debian.org/debian bookworm/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.10+dfsg-1+b1 [139 kB] Get:342 http://deb.debian.org/debian bookworm/main amd64 gtk-update-icon-cache amd64 3.24.38-2~deb12u1 [44.0 kB] Get:343 http://deb.debian.org/debian bookworm/main amd64 adwaita-icon-theme all 43-1 [5124 kB] Get:344 http://deb.debian.org/debian bookworm/main amd64 liblua5.1-0 amd64 5.1.5-9 [111 kB] Get:345 http://deb.debian.org/debian bookworm/main amd64 libtre5 amd64 0.8.0-7 [58.1 kB] Get:346 http://deb.debian.org/debian bookworm/main amd64 lua-md5 amd64 1.2+git+1+8d87fee-2 [12.8 kB] Get:347 http://deb.debian.org/debian bookworm/main amd64 genometools-common all 1.6.2+ds-3 [194 kB] Get:348 http://deb.debian.org/debian bookworm/main amd64 libgenometools0 amd64 1.6.2+ds-3 [1388 kB] Get:349 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [144 kB] Get:350 http://deb.debian.org/debian bookworm/main amd64 libjs-mootools all 1.4.5~debian1-3 [179 kB] Get:351 http://deb.debian.org/debian bookworm/main amd64 aegean amd64 0.16.0+dfsg-2 [207 kB] Get:352 http://deb.debian.org/debian bookworm/main amd64 aevol amd64 5.0+ds-3+b1 [559 kB] Get:353 http://deb.debian.org/debian bookworm/main amd64 aglfn all 1.7+git20191031.4036a9c-2 [30.5 kB] Get:354 http://deb.debian.org/debian bookworm/main amd64 ca-certificates-java all 20230710~deb12u1 [11.9 kB] Get:355 http://deb.debian.org/debian bookworm/main amd64 java-common all 0.74 [6388 B] Get:356 http://deb.debian.org/debian bookworm/main amd64 libnspr4 amd64 2:4.35-1 [113 kB] Get:357 http://deb.debian.org/debian bookworm/main amd64 libnss3 amd64 2:3.87.1-1 [1331 kB] Get:358 http://deb.debian.org/debian bookworm/main amd64 libasound2-data all 1.2.8-1 [20.5 kB] Get:359 http://deb.debian.org/debian bookworm/main amd64 libasound2 amd64 1.2.8-1+b1 [362 kB] Get:360 http://deb.debian.org/debian bookworm/main amd64 libpcsclite1 amd64 1.9.9-2 [49.7 kB] Get:361 http://deb.debian.org/debian bookworm/main amd64 openjdk-17-jre-headless amd64 17.0.10+7-1~deb12u1 [43.7 MB] Get:362 http://deb.debian.org/debian bookworm/main amd64 default-jre-headless amd64 2:1.17-74 [2936 B] Get:363 http://deb.debian.org/debian bookworm/main amd64 libgtk2.0-common all 2.24.33-2 [2700 kB] Get:364 http://deb.debian.org/debian bookworm/main amd64 at-spi2-common all 2.46.0-5 [162 kB] Get:365 http://deb.debian.org/debian bookworm/main amd64 libatk1.0-0 amd64 2.46.0-5 [49.6 kB] Get:366 http://deb.debian.org/debian bookworm/main amd64 libxcomposite1 amd64 1:0.4.5-1 [16.6 kB] Get:367 http://deb.debian.org/debian bookworm/main amd64 libxcursor1 amd64 1:1.2.1-1 [40.9 kB] Get:368 http://deb.debian.org/debian bookworm/main amd64 libxdamage1 amd64 1:1.1.6-1 [15.1 kB] Get:369 http://deb.debian.org/debian bookworm/main amd64 libxi6 amd64 2:1.8-1+b1 [84.2 kB] Get:370 http://deb.debian.org/debian bookworm/main amd64 libxinerama1 amd64 2:1.1.4-3 [17.8 kB] Get:371 http://deb.debian.org/debian bookworm/main amd64 libxrandr2 amd64 2:1.5.2-2+b1 [39.2 kB] Get:372 http://deb.debian.org/debian bookworm/main amd64 libgtk2.0-0 amd64 2.24.33-2 [1855 kB] Get:373 http://deb.debian.org/debian bookworm/main amd64 libatspi2.0-0 amd64 2.46.0-5 [75.4 kB] Get:374 http://deb.debian.org/debian bookworm/main amd64 libatk-bridge2.0-0 amd64 2.46.0-5 [64.6 kB] Get:375 http://deb.debian.org/debian bookworm/main amd64 libcairo-gobject2 amd64 1.16.0-7 [112 kB] Get:376 http://deb.debian.org/debian bookworm/main amd64 libcolord2 amd64 1.4.6-2.2 [137 kB] Get:377 http://deb.debian.org/debian bookworm/main amd64 libepoxy0 amd64 1.5.10-1 [189 kB] Get:378 http://deb.debian.org/debian bookworm/main amd64 libwayland-cursor0 amd64 1.21.0-1 [14.4 kB] Get:379 http://deb.debian.org/debian bookworm/main amd64 libwayland-egl1 amd64 1.21.0-1 [8640 B] Get:380 http://deb.debian.org/debian bookworm/main amd64 dbus-user-session amd64 1.14.10-1~deb12u1 [78.1 kB] Get:381 http://deb.debian.org/debian bookworm/main amd64 libdconf1 amd64 0.40.0-4 [40.9 kB] Get:382 http://deb.debian.org/debian bookworm/main amd64 dconf-service amd64 0.40.0-4 [31.6 kB] Get:383 http://deb.debian.org/debian bookworm/main amd64 dconf-gsettings-backend amd64 0.40.0-4 [27.8 kB] Get:384 http://deb.debian.org/debian bookworm/main amd64 libgtk-3-common all 3.24.38-2~deb12u1 [3895 kB] Get:385 http://deb.debian.org/debian bookworm/main amd64 libgtk-3-0 amd64 3.24.38-2~deb12u1 [2846 kB] Get:386 http://deb.debian.org/debian bookworm/main amd64 libgif7 amd64 5.2.1-2.5 [46.9 kB] Get:387 http://deb.debian.org/debian bookworm/main amd64 libxtst6 amd64 2:1.2.3-1.1 [28.0 kB] Get:388 http://deb.debian.org/debian bookworm/main amd64 openjdk-17-jre amd64 17.0.10+7-1~deb12u1 [184 kB] Get:389 http://deb.debian.org/debian bookworm/main amd64 default-jre amd64 2:1.17-74 [1056 B] Get:390 http://deb.debian.org/debian bookworm/main amd64 libbytecode-java all 0.92.svn.20090106-2.1 [88.9 kB] Get:391 http://deb.debian.org/debian bookworm/main amd64 libcommons-pool-java all 1.6-4 [109 kB] Get:392 http://deb.debian.org/debian bookworm/main amd64 libcommons-dbcp-java all 1.4-8 [157 kB] Get:393 http://deb.debian.org/debian bookworm/main amd64 libatinject-jsr330-api-java all 1.0+ds1-5 [5312 B] Get:394 http://deb.debian.org/debian bookworm/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB] Get:395 http://deb.debian.org/debian bookworm/main amd64 libjsr305-java all 0.1~+svn49-11 [26.9 kB] Get:396 http://deb.debian.org/debian bookworm/main amd64 libguava-java all 31.1-1 [2613 kB] Get:397 http://deb.debian.org/debian bookworm/main amd64 libjgraph-java all 5.12.4.2+dfsg-7 [207 kB] Get:398 http://deb.debian.org/debian bookworm/main amd64 libjgrapht0.8-java all 0.8.3-6 [214 kB] Get:399 http://deb.debian.org/debian bookworm/main amd64 libbiojava1.9-java all 1:1.9.5+dfsg-3 [3154 kB] Get:400 http://deb.debian.org/debian bookworm/main amd64 libbiojava-java all 1:1.9.5+dfsg-3 [5428 B] Get:401 http://deb.debian.org/debian bookworm/main amd64 libcommons-cli-java all 1.5.0-1 [60.0 kB] Get:402 http://deb.debian.org/debian bookworm/main amd64 libcommons-collections3-java all 3.2.2-2 [526 kB] Get:403 http://deb.debian.org/debian bookworm/main amd64 alien-hunter all 1.7-10 [28.5 kB] Get:404 http://deb.debian.org/debian bookworm/main amd64 alsa-topology-conf all 1.2.5.1-2 [15.2 kB] Get:405 http://deb.debian.org/debian bookworm/main amd64 alsa-ucm-conf all 1.2.8-1 [51.7 kB] Get:406 http://deb.debian.org/debian bookworm/main amd64 alter-sequence-alignment all 1.3.4-6 [776 kB] Get:407 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get:408 http://deb.debian.org/debian bookworm/main amd64 libquadmath0 amd64 12.2.0-14 [144 kB] Get:409 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get:410 http://deb.debian.org/debian bookworm/main amd64 libopenblas0-pthread amd64 0.3.21+ds-4 [6709 kB] Get:411 http://deb.debian.org/debian bookworm/main amd64 libatlas3-base amd64 3.10.3-13 [3305 kB] Get:412 http://deb.debian.org/debian bookworm/main amd64 libtamuanova-0.2 amd64 0.2-5+b2 [8888 B] Get:413 http://deb.debian.org/debian bookworm/main amd64 libmath-tamuanova-perl amd64 1.0.2-3+b1 [13.6 kB] Get:414 http://deb.debian.org/debian bookworm/main amd64 altree amd64 1.3.2-1+b3 [346 kB] Get:415 http://deb.debian.org/debian bookworm/main amd64 amap-align amd64 2.2+git20080214.600fc29+dfsg-2 [132 kB] Get:416 http://deb.debian.org/debian bookworm/main amd64 mafft amd64 7.505-1 [1078 kB] Get:417 http://deb.debian.org/debian bookworm/main amd64 ampliconnoise amd64 1.29-10+b2 [1112 kB] Get:418 http://deb.debian.org/debian bookworm/main amd64 libdivsufsort3 amd64 2.0.1-5 [44.7 kB] Get:419 http://deb.debian.org/debian bookworm/main amd64 andi amd64 0.14-2 [472 kB] Get:420 http://deb.debian.org/debian bookworm/main amd64 ant all 1.10.13-1 [2161 kB] Get:421 http://deb.debian.org/debian bookworm/main amd64 ant-optional all 1.10.13-1 [449 kB] Get:422 http://deb.debian.org/debian bookworm/main amd64 libantlr-java all 2.7.7+dfsg-12 [458 kB] Get:423 http://deb.debian.org/debian bookworm/main amd64 antlr all 2.7.7+dfsg-12 [14.3 kB] Get:424 http://deb.debian.org/debian bookworm/main amd64 libantlr3-runtime-java all 3.5.3-1 [165 kB] Get:425 http://deb.debian.org/debian bookworm/main amd64 libstringtemplate4-java all 4.0.8-2.1 [241 kB] Get:426 http://deb.debian.org/debian bookworm/main amd64 antlr3 all 3.5.3-1 [1151 kB] Get:427 http://deb.debian.org/debian bookworm/main amd64 libantlr4-runtime-java all 4.7.2-5 [315 kB] Get:428 http://deb.debian.org/debian bookworm/main amd64 libicu4j-java all 72.1-1 [16.3 MB] Get:429 http://deb.debian.org/debian bookworm/main amd64 libjsonp-java all 1.1.2-3 [127 kB] Get:430 http://deb.debian.org/debian bookworm/main amd64 libtreelayout-java all 1.0.3-2 [27.0 kB] Get:431 http://deb.debian.org/debian bookworm/main amd64 antlr4 all 4.7.2-5 [1345 kB] Get:432 http://deb.debian.org/debian bookworm/main amd64 any2fasta all 0.4.2-2 [6232 B] Get:433 http://deb.debian.org/debian bookworm/main amd64 apbs-data all 3.4.1-5 [1489 kB] Get:434 http://deb.debian.org/debian bookworm/main amd64 libmaloc1 amd64 1.5-1 [81.7 kB] Get:435 http://deb.debian.org/debian bookworm/main amd64 libsuperlu5 amd64 5.3.0+dfsg1-2+b1 [170 kB] Get:436 http://deb.debian.org/debian bookworm/main amd64 libsuitesparseconfig5 amd64 1:5.12.0+dfsg-2 [23.9 kB] Get:437 http://deb.debian.org/debian bookworm/main amd64 libamd2 amd64 1:5.12.0+dfsg-2 [36.2 kB] Get:438 http://deb.debian.org/debian bookworm/main amd64 libcamd2 amd64 1:5.12.0+dfsg-2 [37.8 kB] Get:439 http://deb.debian.org/debian bookworm/main amd64 libccolamd2 amd64 1:5.12.0+dfsg-2 [39.7 kB] Get:440 http://deb.debian.org/debian bookworm/main amd64 libcolamd2 amd64 1:5.12.0+dfsg-2 [32.9 kB] Get:441 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get:442 http://deb.debian.org/debian bookworm/main amd64 libmetis5 amd64 5.1.0.dfsg-7 [171 kB] Get:443 http://deb.debian.org/debian bookworm/main amd64 libcholmod3 amd64 1:5.12.0+dfsg-2 [335 kB] Get:444 http://deb.debian.org/debian bookworm/main amd64 libumfpack5 amd64 1:5.12.0+dfsg-2 [245 kB] Get:445 http://deb.debian.org/debian bookworm/main amd64 libfetk1.9 amd64 3.4.1-5 [565 kB] Get:446 http://deb.debian.org/debian bookworm/main amd64 libapbs3 amd64 3.4.1-5 [257 kB] Get:447 http://deb.debian.org/debian bookworm/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get:448 http://deb.debian.org/debian bookworm/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get:449 http://deb.debian.org/debian bookworm/main amd64 libarpack2 amd64 3.8.0-3 [102 kB] Get:450 http://deb.debian.org/debian bookworm/main amd64 libspqr2 amd64 1:5.12.0+dfsg-2 [82.2 kB] Get:451 http://deb.debian.org/debian bookworm/main amd64 apbs amd64 3.4.1-5 [77.8 kB] Get:452 http://deb.debian.org/debian bookworm/main amd64 aragorn amd64 1.2.38-4 [86.7 kB] Get:453 http://deb.debian.org/debian bookworm/main amd64 python3-decorator all 5.1.1-3 [14.9 kB] Get:454 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1 [296 kB] Get:455 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1 [5209 kB] Get:456 http://deb.debian.org/debian bookworm/main amd64 libisl23 amd64 0.25-1.1 [683 kB] Get:457 http://deb.debian.org/debian bookworm/main amd64 libmpc3 amd64 1.3.1-1 [51.5 kB] Get:458 http://deb.debian.org/debian bookworm/main amd64 cpp-12 amd64 12.2.0-14 [9764 kB] Get:459 http://deb.debian.org/debian bookworm/main amd64 cpp amd64 4:12.2.0-3 [6836 B] Get:460 http://deb.debian.org/debian bookworm/main amd64 libcc1-0 amd64 12.2.0-14 [41.7 kB] Get:461 http://deb.debian.org/debian bookworm/main amd64 binutils-common amd64 2.40-2 [2487 kB] Get:462 http://deb.debian.org/debian bookworm/main amd64 libbinutils amd64 2.40-2 [572 kB] Get:463 http://deb.debian.org/debian bookworm/main amd64 libctf-nobfd0 amd64 2.40-2 [153 kB] Get:464 http://deb.debian.org/debian bookworm/main amd64 libctf0 amd64 2.40-2 [89.8 kB] Get:465 http://deb.debian.org/debian bookworm/main amd64 libgprofng0 amd64 2.40-2 [812 kB] Get:466 http://deb.debian.org/debian bookworm/main amd64 binutils-x86-64-linux-gnu amd64 2.40-2 [2246 kB] Get:467 http://deb.debian.org/debian bookworm/main amd64 binutils amd64 2.40-2 [65.0 kB] Get:468 http://deb.debian.org/debian bookworm/main amd64 libitm1 amd64 12.2.0-14 [26.1 kB] Get:469 http://deb.debian.org/debian bookworm/main amd64 libasan8 amd64 12.2.0-14 [2195 kB] Get:470 http://deb.debian.org/debian bookworm/main amd64 liblsan0 amd64 12.2.0-14 [969 kB] Get:471 http://deb.debian.org/debian bookworm/main amd64 libtsan2 amd64 12.2.0-14 [2196 kB] Get:472 http://deb.debian.org/debian bookworm/main amd64 libubsan1 amd64 12.2.0-14 [883 kB] Get:473 http://deb.debian.org/debian bookworm/main amd64 libgcc-12-dev amd64 12.2.0-14 [2437 kB] Get:474 http://deb.debian.org/debian bookworm/main amd64 gcc-12 amd64 12.2.0-14 [19.3 MB] Get:475 http://deb.debian.org/debian bookworm/main amd64 gcc amd64 4:12.2.0-3 [5216 B] Get:476 http://deb.debian.org/debian bookworm/main amd64 libc-dev-bin amd64 2.36-9+deb12u4 [45.4 kB] Get:477 http://deb.debian.org/debian bookworm/main amd64 linux-libc-dev amd64 6.1.76-1 [1930 kB] Get:478 http://deb.debian.org/debian bookworm/main amd64 libcrypt-dev amd64 1:4.4.33-2 [118 kB] Get:479 http://deb.debian.org/debian bookworm/main amd64 libtirpc-dev amd64 1.3.3+ds-1 [191 kB] Get:480 http://deb.debian.org/debian bookworm/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:481 http://deb.debian.org/debian bookworm/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Get:482 http://deb.debian.org/debian bookworm/main amd64 libc6-dev amd64 2.36-9+deb12u4 [1897 kB] Get:483 http://deb.debian.org/debian bookworm/main amd64 libstdc++-12-dev amd64 12.2.0-14 [2046 kB] Get:484 http://deb.debian.org/debian bookworm/main amd64 g++-12 amd64 12.2.0-14 [10.7 MB] Get:485 http://deb.debian.org/debian bookworm/main amd64 g++ amd64 4:12.2.0-3 [1356 B] Get:486 http://deb.debian.org/debian bookworm/main amd64 libopenblas0 amd64 0.3.21+ds-4 [32.6 kB] Get:487 http://deb.debian.org/debian bookworm/main amd64 libopenblas-pthread-dev amd64 0.3.21+ds-4 [4971 kB] Get:488 http://deb.debian.org/debian bookworm/main amd64 libopenblas-dev amd64 0.3.21+ds-4 [44.9 kB] Get:489 http://deb.debian.org/debian bookworm/main amd64 libblas-dev amd64 3.11.0-2 [158 kB] Get:490 http://deb.debian.org/debian bookworm/main amd64 libboost1.74-dev amd64 1.74.0+ds1-21 [9508 kB] Get:491 http://deb.debian.org/debian bookworm/main amd64 libboost-dev amd64 1.74.0.3 [4548 B] Get:492 http://deb.debian.org/debian bookworm/main amd64 libpython3.11 amd64 3.11.2-6 [1988 kB] Get:493 http://deb.debian.org/debian bookworm/main amd64 libexpat1-dev amd64 2.5.0-1 [150 kB] Get:494 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get:495 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-dev amd64 3.11.2-6 [4738 kB] Get:496 http://deb.debian.org/debian bookworm/main amd64 libpython3-dev amd64 3.11.2-1+b1 [9572 B] Get:497 http://deb.debian.org/debian bookworm/main amd64 libpython3-all-dev amd64 3.11.2-1+b1 [1068 B] Get:498 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-3 [76.3 kB] Get:499 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-3 [131 kB] Get:500 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.11.2-1+b1 [1056 B] Get:501 http://deb.debian.org/debian bookworm/main amd64 python3.11-dev amd64 3.11.2-6 [615 kB] Get:502 http://deb.debian.org/debian bookworm/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get:503 http://deb.debian.org/debian bookworm/main amd64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get:504 http://deb.debian.org/debian bookworm/main amd64 python3-dev amd64 3.11.2-1+b1 [26.2 kB] Get:505 http://deb.debian.org/debian bookworm/main amd64 python3-all-dev amd64 3.11.2-1+b1 [1072 B] Get:506 http://deb.debian.org/debian bookworm/main amd64 libxsimd-dev amd64 8.1.0-7 [88.8 kB] Get:507 http://deb.debian.org/debian bookworm/main amd64 python3-gast all 0.5.2-2 [9364 B] Get:508 http://deb.debian.org/debian bookworm/main amd64 python3-beniget all 0.4.1-3 [9920 B] Get:509 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB] Get:510 http://deb.debian.org/debian bookworm/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB] Get:511 http://deb.debian.org/debian bookworm/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [28.9 kB] Get:512 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.10.1-2 [15.2 MB] Get:513 http://deb.debian.org/debian bookworm/main amd64 libcurl3-gnutls amd64 7.88.1-10+deb12u5 [385 kB] Get:514 http://deb.debian.org/debian bookworm/main amd64 libhtscodecs2 amd64 1.3.0-4 [87.5 kB] Get:515 http://deb.debian.org/debian bookworm/main amd64 libhts3 amd64 1.16+ds-3 [430 kB] Get:516 http://deb.debian.org/debian bookworm/main amd64 python3-pysam amd64 0.20.0+ds-3+b1 [1681 kB] Get:517 http://deb.debian.org/debian bookworm/main amd64 python3-htseq amd64 1.99.2-1+b3 [268 kB] Get:518 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:519 http://deb.debian.org/debian bookworm/main amd64 fonts-lyx all 2.3.7-1 [186 kB] Get:520 http://deb.debian.org/debian bookworm/main amd64 python-matplotlib-data all 3.6.3-1 [2744 kB] Get:521 http://deb.debian.org/debian bookworm/main amd64 python3-six all 1.16.0-4 [17.5 kB] Get:522 http://deb.debian.org/debian bookworm/main amd64 python3-dateutil all 2.8.2-2 [78.3 kB] Get:523 http://deb.debian.org/debian bookworm/main amd64 libimagequant0 amd64 2.17.0-1 [32.5 kB] Get:524 http://deb.debian.org/debian bookworm/main amd64 libraqm0 amd64 0.7.0-4.1 [10.6 kB] Get:525 http://deb.debian.org/debian bookworm/main amd64 python3-pil amd64 9.4.0-1.1+b1 [472 kB] Get:526 http://deb.debian.org/debian bookworm/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [1035 kB] Get:527 http://deb.debian.org/debian bookworm/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get:528 http://deb.debian.org/debian bookworm/main amd64 libtk8.6 amd64 8.6.13-2 [781 kB] Get:529 http://deb.debian.org/debian bookworm/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4.1 [593 kB] Get:530 http://deb.debian.org/debian bookworm/main amd64 blt amd64 2.5.3+dfsg-4.1 [14.9 kB] Get:531 http://deb.debian.org/debian bookworm/main amd64 python3-tk amd64 3.11.2-3 [98.3 kB] Get:532 http://deb.debian.org/debian bookworm/main amd64 python3-pil.imagetk amd64 9.4.0-1.1+b1 [74.4 kB] Get:533 http://deb.debian.org/debian bookworm/main amd64 python3-pyparsing all 3.0.9-1 [138 kB] Get:534 http://deb.debian.org/debian bookworm/main amd64 python3-contourpy amd64 1.0.7-1+b1 [176 kB] Get:535 http://deb.debian.org/debian bookworm/main amd64 python3-cycler all 0.11.0-1 [8020 B] Get:536 http://deb.debian.org/debian bookworm/main amd64 python3-brotli amd64 1.0.9-2+b6 [281 kB] Get:537 http://deb.debian.org/debian bookworm/main amd64 python3-attr all 22.2.0-1 [65.4 kB] Get:538 http://deb.debian.org/debian bookworm/main amd64 python3-typing-extensions all 4.4.0-1 [45.2 kB] Get:539 http://deb.debian.org/debian bookworm/main amd64 python3-ufolib2 all 0.14.0+dfsg1-1 [34.3 kB] Get:540 http://deb.debian.org/debian bookworm/main amd64 python3-mpmath all 1.2.1-2 [418 kB] Get:541 http://deb.debian.org/debian bookworm/main amd64 python3-sympy all 1.11.1-1 [4358 kB] Get:542 http://deb.debian.org/debian bookworm/main amd64 python3-tz all 2022.7.1-4 [30.1 kB] Get:543 http://deb.debian.org/debian bookworm/main amd64 python3-appdirs all 1.4.4-3 [13.0 kB] Get:544 http://deb.debian.org/debian bookworm/main amd64 python3-fs all 2.4.16-2 [95.2 kB] Get:545 http://deb.debian.org/debian bookworm/main amd64 python3-lxml amd64 4.9.2-1+b1 [1194 kB] Get:546 http://deb.debian.org/debian bookworm/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b2 [25.0 kB] Get:547 http://deb.debian.org/debian bookworm/main amd64 unicode-data all 15.0.0-1 [7984 kB] Get:548 http://deb.debian.org/debian bookworm/main amd64 python3-fonttools amd64 4.38.0-1+b1 [1012 kB] Get:549 http://deb.debian.org/debian bookworm/main amd64 python3-kiwisolver amd64 1.4.4-1+b1 [60.1 kB] Get:550 http://deb.debian.org/debian bookworm/main amd64 python3-packaging all 23.0-1 [32.5 kB] Get:551 http://deb.debian.org/debian bookworm/main amd64 libqhull-r8.0 amd64 2020.2-5 [248 kB] Get:552 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib amd64 3.6.3-1+b1 [6921 kB] Get:553 http://deb.debian.org/debian bookworm/main amd64 arden all 1.0-5 [89.3 kB] Get:554 http://deb.debian.org/debian bookworm/main amd64 libncurses6 amd64 6.4-4 [103 kB] Get:555 http://deb.debian.org/debian bookworm/main amd64 samtools amd64 1.16.1-1 [607 kB] Get:556 http://deb.debian.org/debian bookworm/main amd64 fastaq all 3.17.0-5 [48.2 kB] Get:557 http://deb.debian.org/debian bookworm/main amd64 python3-renderpm amd64 3.6.12-1+b1 [79.2 kB] Get:558 http://deb.debian.org/debian bookworm/main amd64 python3-reportlab-accel amd64 3.6.12-1+b1 [38.6 kB] Get:559 http://deb.debian.org/debian bookworm/main amd64 python3-reportlab all 3.6.12-1 [564 kB] Get:560 http://deb.debian.org/debian bookworm/main amd64 xml-core all 0.18+nmu1 [23.8 kB] Get:561 http://deb.debian.org/debian bookworm/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get:562 http://deb.debian.org/debian bookworm/main amd64 python3-biopython amd64 1.80+dfsg-4+b1 [1593 kB] Get:563 http://deb.debian.org/debian bookworm/main amd64 python3-soupsieve all 2.3.2-1 [38.8 kB] Get:564 http://deb.debian.org/debian bookworm/main amd64 python3-bs4 all 4.11.2-2 [121 kB] Get:565 http://deb.debian.org/debian bookworm/main amd64 python3-dendropy all 4.5.2-1 [275 kB] Get:566 http://deb.debian.org/debian bookworm/main amd64 python3-pymummer all 0.11.0-3 [11.4 kB] Get:567 http://deb.debian.org/debian bookworm/main amd64 libfml0 amd64 0.1+git20190320.b499514-1+b1 [71.4 kB] Get:568 http://deb.debian.org/debian bookworm/main amd64 libminimap0 amd64 0.2-7 [21.8 kB] Get:569 http://deb.debian.org/debian bookworm/main amd64 bowtie2 amd64 2.5.0-3+b2 [1409 kB] Get:570 http://deb.debian.org/debian bookworm/main amd64 cd-hit amd64 4.8.1-4 [522 kB] Get:571 http://deb.debian.org/debian bookworm/main amd64 libcapnp-0.9.2 amd64 0.9.2-2 [1305 kB] Get:572 http://deb.debian.org/debian bookworm/main amd64 libmurmurhash2 amd64 1.5-3 [5860 B] Get:573 http://deb.debian.org/debian bookworm/main amd64 mash amd64 2.3+dfsg-3+b1 [188 kB] Get:574 http://deb.debian.org/debian bookworm/main amd64 ariba amd64 2.14.6+ds-5+b1 [1956 kB] Get:575 http://deb.debian.org/debian bookworm/main amd64 art-nextgen-simulation-tools amd64 20160605+dfsg-4+b3 [1685 kB] Get:576 http://deb.debian.org/debian bookworm/main amd64 unzip amd64 6.0-28 [166 kB] Get:577 http://deb.debian.org/debian bookworm/main amd64 java-wrappers all 0.4 [8916 B] Get:578 http://deb.debian.org/debian bookworm/main amd64 libjaxp1.3-java all 1.3.05-6 [227 kB] Get:579 http://deb.debian.org/debian bookworm/main amd64 libxml-commons-external-java all 1.4.01-5 [240 kB] Get:580 http://deb.debian.org/debian bookworm/main amd64 libapache-pom-java all 29-2 [5276 B] Get:581 http://deb.debian.org/debian bookworm/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:582 http://deb.debian.org/debian bookworm/main amd64 libcommons-io-java all 2.11.0-2 [319 kB] Get:583 http://deb.debian.org/debian bookworm/main amd64 libcommons-logging-java all 1.2-3 [62.4 kB] Get:584 http://deb.debian.org/debian bookworm/main amd64 libxmlgraphics-commons-java all 2.8-2 [623 kB] Get:585 http://deb.debian.org/debian bookworm/main amd64 libbatik-java all 1.16+dfsg-1+deb12u1 [3949 kB] Get:586 http://deb.debian.org/debian bookworm/main amd64 libasm-java all 9.4-1 [389 kB] Get:587 http://deb.debian.org/debian bookworm/main amd64 libcglib-java all 3.3.0-1 [288 kB] Get:588 http://deb.debian.org/debian bookworm/main amd64 libibatis-java all 2.3.4.726-6.1 [339 kB] Get:589 http://deb.debian.org/debian bookworm/main amd64 libj2ssh-java all 0.2.9-5 [727 kB] Get:590 http://deb.debian.org/debian bookworm/main amd64 libhpdf-2.3.0 amd64 2.3.0+dfsg-1+b1 [349 kB] Get:591 http://deb.debian.org/debian bookworm/main amd64 mysql-common all 5.8+1.1.0 [6636 B] Get:592 http://deb.debian.org/debian bookworm/main amd64 mariadb-common all 1:10.11.6-0+deb12u1 [24.4 kB] Get:593 http://deb.debian.org/debian bookworm/main amd64 libmariadb3 amd64 1:10.11.6-0+deb12u1 [174 kB] Get:594 http://deb.debian.org/debian bookworm/main amd64 libpq5 amd64 15.5-0+deb12u1 [187 kB] Get:595 http://deb.debian.org/debian bookworm/main amd64 emboss-lib amd64 6.6.0+dfsg-12 [2871 kB] Get:596 http://deb.debian.org/debian bookworm/main amd64 emboss-data all 6.6.0+dfsg-12 [61.1 MB] Get:597 http://deb.debian.org/debian bookworm/main amd64 emboss amd64 6.6.0+dfsg-12 [1069 kB] Get:598 http://deb.debian.org/debian bookworm/main amd64 jemboss all 6.6.0+dfsg-12 [3812 kB] Get:599 http://deb.debian.org/debian bookworm/main amd64 libcommons-lang3-java all 3.12.0-2 [561 kB] Get:600 http://deb.debian.org/debian bookworm/main amd64 libcommons-net-java all 3.9.0-1 [294 kB] Get:601 http://deb.debian.org/debian bookworm/main amd64 libcommons-compress-java all 1.22-1 [615 kB] Get:602 http://deb.debian.org/debian bookworm/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get:603 http://deb.debian.org/debian bookworm/main amd64 libmjson-java all 1.4.0-3 [60.4 kB] Get:604 http://deb.debian.org/debian bookworm/main amd64 libmbedcrypto7 amd64 2.28.3-1 [277 kB] Get:605 http://deb.debian.org/debian bookworm/main amd64 libmbedx509-1 amd64 2.28.3-1 [128 kB] Get:606 http://deb.debian.org/debian bookworm/main amd64 libmbedtls14 amd64 2.28.3-1 [163 kB] Get:607 http://deb.debian.org/debian bookworm/main amd64 ncbi-vdb-data all 3.0.2+dfsg-2 [73.3 kB] Get:608 http://deb.debian.org/debian bookworm/main amd64 libncbi-vdb3 amd64 3.0.2+dfsg-2 [1050 kB] Get:609 http://deb.debian.org/debian bookworm/main amd64 libncbi-ngs3 amd64 3.0.3+dfsg-6~deb12u1 [154 kB] Get:610 http://deb.debian.org/debian bookworm/main amd64 libngs-jni amd64 3.0.3+dfsg-6~deb12u1 [23.5 kB] Get:611 http://deb.debian.org/debian bookworm/main amd64 libngs-java amd64 3.0.3+dfsg-6~deb12u1 [110 kB] Get:612 http://deb.debian.org/debian bookworm/main amd64 librhino-java all 1.7.14-2.1 [1357 kB] Get:613 http://deb.debian.org/debian bookworm/main amd64 libsnappy1v5 amd64 1.1.9-3 [26.0 kB] Get:614 http://deb.debian.org/debian bookworm/main amd64 libsnappy-jni amd64 1.1.8.3-1 [7152 B] Get:615 http://deb.debian.org/debian bookworm/main amd64 libsnappy-java all 1.1.8.3-1 [98.9 kB] Get:616 http://deb.debian.org/debian bookworm/main amd64 libhtsjdk-java all 3.0.4+dfsg-2 [1813 kB] Get:617 http://deb.debian.org/debian bookworm/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get:618 http://deb.debian.org/debian bookworm/main amd64 libfreemarker-java all 2.3.31-2 [1528 kB] Get:619 http://deb.debian.org/debian bookworm/main amd64 libgoogle-gson-java all 2.10-1 [261 kB] Get:620 http://deb.debian.org/debian bookworm/main amd64 libjoptsimple-java all 5.0.4-4 [73.1 kB] Get:621 http://deb.debian.org/debian bookworm/main amd64 libcommons-codec-java all 1.15-1 [292 kB] Get:622 http://deb.debian.org/debian bookworm/main amd64 libhttpcore-java all 4.4.16-1 [636 kB] Get:623 http://deb.debian.org/debian bookworm/main amd64 libhttpclient-java all 4.5.14-1 [1247 kB] Get:624 http://deb.debian.org/debian bookworm/main amd64 liblightcouch-java all 0.2.0-1 [75.0 kB] Get:625 http://deb.debian.org/debian bookworm/main amd64 libmongodb-java all 3.6.3-2 [1901 kB] Get:626 http://deb.debian.org/debian bookworm/main amd64 libslf4j-java all 1.7.32-1 [144 kB] Get:627 http://deb.debian.org/debian bookworm/main amd64 liblog4j2-java all 2.19.0-2 [2310 kB] Get:628 http://deb.debian.org/debian bookworm/main amd64 libbarclay-java all 4.1.0+dfsg-1 [103 kB] Get:629 http://deb.debian.org/debian bookworm/main amd64 libgatk-native-bindings-java all 1.0.0+dfsg-2 [8024 B] Get:630 http://deb.debian.org/debian bookworm/main amd64 libgkl-java all 0.8.10+dfsg-3 [25.0 kB] Get:631 http://deb.debian.org/debian bookworm/main amd64 libcommons-math3-java all 3.6.1-3 [2018 kB] Get:632 http://deb.debian.org/debian bookworm/main amd64 libpicard-java all 2.27.5+dfsg-2 [1725 kB] Get:633 http://deb.debian.org/debian bookworm/main amd64 libpostgresql-jdbc-java all 42.5.4-1 [958 kB] Get:634 http://deb.debian.org/debian bookworm/main amd64 artemis all 18.2.0+dfsg-3 [3800 kB] Get:635 http://deb.debian.org/debian bookworm/main amd64 artfastqgenerator all 0.0.20150519-4 [40.6 kB] Get:636 http://deb.debian.org/debian bookworm/main amd64 libaspell15 amd64 0.60.8-4+b1 [344 kB] Get:637 http://deb.debian.org/debian bookworm/main amd64 libtext-iconv-perl amd64 1.7-8 [14.5 kB] Get:638 http://deb.debian.org/debian bookworm/main amd64 emacsen-common all 3.0.5 [12.3 kB] Get:639 http://deb.debian.org/debian bookworm/main amd64 dictionaries-common all 1.29.5 [184 kB] Get:640 http://deb.debian.org/debian bookworm/main amd64 aspell amd64 0.60.8-4+b1 [266 kB] Get:641 http://deb.debian.org/debian bookworm/main amd64 aspell-en all 2020.12.07-0-1 [306 kB] Get:642 http://deb.debian.org/debian bookworm/main amd64 assembly-stats amd64 1.0.1+ds-6 [22.3 kB] Get:643 http://deb.debian.org/debian bookworm/main amd64 zip amd64 3.0-13 [230 kB] Get:644 http://deb.debian.org/debian bookworm/main amd64 libpaper1 amd64 1.1.29 [12.5 kB] Get:645 http://deb.debian.org/debian bookworm/main amd64 libpaper-utils amd64 1.1.29 [8868 B] Get:646 http://deb.debian.org/debian bookworm/main amd64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get:647 http://deb.debian.org/debian bookworm/main amd64 r-base-core amd64 4.2.2.20221110-2 [26.0 MB] Get:648 http://deb.debian.org/debian bookworm/main amd64 r-cran-cli amd64 3.6.0-1 [1287 kB] Get:649 http://deb.debian.org/debian bookworm/main amd64 r-cran-glue amd64 1.6.2-1 [152 kB] Get:650 http://deb.debian.org/debian bookworm/main amd64 r-cran-gtable all 0.3.1+dfsg-1 [165 kB] Get:651 http://deb.debian.org/debian bookworm/main amd64 r-cran-isoband amd64 0.2.7-1 [1614 kB] Get:652 http://deb.debian.org/debian bookworm/main amd64 r-cran-rlang amd64 1.0.6-1 [1618 kB] Get:653 http://deb.debian.org/debian bookworm/main amd64 r-cran-lifecycle all 1.0.3+dfsg-1 [109 kB] Get:654 http://deb.debian.org/debian bookworm/main amd64 r-cran-mass amd64 7.3-58.2-1 [1121 kB] Get:655 http://deb.debian.org/debian bookworm/main amd64 r-cran-lattice amd64 0.20-45-3 [1177 kB] Get:656 http://deb.debian.org/debian bookworm/main amd64 r-cran-nlme amd64 3.1.162-1 [2260 kB] Get:657 http://deb.debian.org/debian bookworm/main amd64 r-cran-matrix amd64 1.5-3-1 [3822 kB] Get:658 http://deb.debian.org/debian bookworm/main amd64 r-cran-mgcv amd64 1.8-41-1 [3171 kB] Get:659 http://deb.debian.org/debian bookworm/main amd64 r-cran-farver amd64 2.1.1-1 [1404 kB] Get:660 http://deb.debian.org/debian bookworm/main amd64 r-cran-labeling all 0.4.2-1 [62.7 kB] Get:661 http://deb.debian.org/debian bookworm/main amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1692 kB] Get:662 http://deb.debian.org/debian bookworm/main amd64 r-cran-munsell all 0.5.0-2 [236 kB] Get:663 http://deb.debian.org/debian bookworm/main amd64 r-cran-r6 all 2.5.1-1 [105 kB] Get:664 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcolorbrewer all 1.1-3-1 [54.7 kB] Get:665 http://deb.debian.org/debian bookworm/main amd64 r-cran-viridislite all 0.4.1-1 [1299 kB] Get:666 http://deb.debian.org/debian bookworm/main amd64 r-cran-scales all 1.2.1-1 [614 kB] Get:667 http://deb.debian.org/debian bookworm/main amd64 r-cran-fansi amd64 1.0.4-1 [619 kB] Get:668 http://deb.debian.org/debian bookworm/main amd64 r-cran-magrittr amd64 2.0.3-1 [201 kB] Get:669 http://deb.debian.org/debian bookworm/main amd64 r-cran-utf8 amd64 1.2.3-1 [133 kB] Get:670 http://deb.debian.org/debian bookworm/main amd64 r-cran-vctrs amd64 0.5.2-1 [1371 kB] Get:671 http://deb.debian.org/debian bookworm/main amd64 r-cran-pillar all 1.8.1+dfsg-1 [463 kB] Get:672 http://deb.debian.org/debian bookworm/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get:673 http://deb.debian.org/debian bookworm/main amd64 r-cran-tibble amd64 3.1.8+dfsg-1 [513 kB] Get:674 http://deb.debian.org/debian bookworm/main amd64 r-cran-withr all 2.5.0-1 [236 kB] Get:675 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggplot2 all 3.4.1+dfsg-1 [3333 kB] Get:676 http://deb.debian.org/debian bookworm/main amd64 r-cran-littler amd64 0.3.17-1 [96.3 kB] Get:677 http://deb.debian.org/debian bookworm/main amd64 littler all 0.3.17-1 [14.4 kB] Get:678 http://deb.debian.org/debian bookworm/main amd64 r-cran-pkgkitten all 0.2.2-2 [27.0 kB] Get:679 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcpp amd64 1.0.10-1 [2059 kB] Get:680 http://deb.debian.org/debian bookworm/main amd64 r-cran-plyr amd64 1.8.8-1 [832 kB] Get:681 http://deb.debian.org/debian bookworm/main amd64 assemblytics all 1.2.1+dfsg-1 [17.9 kB] Get:682 http://deb.debian.org/debian bookworm/main amd64 gsettings-desktop-schemas all 43.0-1 [643 kB] Get:683 http://deb.debian.org/debian bookworm/main amd64 at-spi2-core amd64 2.46.0-5 [57.3 kB] Get:684 http://deb.debian.org/debian bookworm/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:685 http://deb.debian.org/debian bookworm/main amd64 leaff amd64 0~20150903+r2013-8+b3 [69.3 kB] Get:686 http://deb.debian.org/debian bookworm/main amd64 meryl amd64 0~20150903+r2013-8+b3 [197 kB] Get:687 http://deb.debian.org/debian bookworm/main amd64 gnuplot-data all 5.4.4+dfsg1-2 [72.1 kB] Get:688 http://deb.debian.org/debian bookworm/main amd64 liblua5.4-0 amd64 5.4.4-3 [137 kB] Get:689 http://deb.debian.org/debian bookworm/main amd64 libqt5svg5 amd64 5.15.8-3 [134 kB] Get:690 http://deb.debian.org/debian bookworm/main amd64 libpcre2-32-0 amd64 10.42-1 [234 kB] Get:691 http://deb.debian.org/debian bookworm/main amd64 libwxbase3.2-1 amd64 3.2.2+dfsg-2 [948 kB] Get:692 http://deb.debian.org/debian bookworm/main amd64 libnotify4 amd64 0.8.1-1 [30.1 kB] Get:693 http://deb.debian.org/debian bookworm/main amd64 libwxgtk3.2-1 amd64 3.2.2+dfsg-2 [4504 kB] Get:694 http://deb.debian.org/debian bookworm/main amd64 gnuplot-qt amd64 5.4.4+dfsg1-2+b2 [1074 kB] Get:695 http://deb.debian.org/debian bookworm/main amd64 gnuplot all 5.4.4+dfsg1-2 [5844 B] Get:696 http://deb.debian.org/debian bookworm/main amd64 atac amd64 0~20150903+r2013-8+b3 [378 kB] Get:697 http://deb.debian.org/debian bookworm/main amd64 libboost-chrono1.74.0 amd64 1.74.0+ds1-21 [228 kB] Get:698 http://deb.debian.org/debian bookworm/main amd64 libboost-iostreams1.74.0 amd64 1.74.0+ds1-21 [240 kB] Get:699 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] Get:700 http://deb.debian.org/debian bookworm/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get:701 http://deb.debian.org/debian bookworm/main amd64 node-normalize.css all 8.0.1-5 [12.7 kB] Get:702 http://deb.debian.org/debian bookworm/main amd64 node-d3-array all 3.2.0+~cs5.0.6-2 [44.1 kB] Get:703 http://deb.debian.org/debian bookworm/main amd64 node-d3-axis all 1.0.12-5 [10.1 kB] Get:704 http://deb.debian.org/debian bookworm/main amd64 node-d3-dispatch all 1.0.6-4 [7892 B] Get:705 http://deb.debian.org/debian bookworm/main amd64 node-d3-selection all 1.4.0-8 [30.8 kB] Get:706 http://deb.debian.org/debian bookworm/main amd64 node-d3-drag all 1.2.5-4 [13.9 kB] Get:707 http://deb.debian.org/debian bookworm/main amd64 node-d3-color all 1.2.8-5 [15.0 kB] Get:708 http://deb.debian.org/debian bookworm/main amd64 node-d3-interpolate all 1.4.0-4 [18.5 kB] Get:709 http://deb.debian.org/debian bookworm/main amd64 node-d3-ease all 1.0.5-5 [9956 B] Get:710 http://deb.debian.org/debian bookworm/main amd64 node-d3-timer all 1.0.10-3 [8500 B] Get:711 http://deb.debian.org/debian bookworm/main amd64 node-d3-transition all 1.3.2-6 [22.3 kB] Get:712 http://deb.debian.org/debian bookworm/main amd64 node-d3-brush all 1.1.5-4 [181 kB] Get:713 http://deb.debian.org/debian bookworm/main amd64 node-d3-path all 1.0.9-4 [8224 B] Get:714 http://deb.debian.org/debian bookworm/main amd64 node-d3-chord all 1.0.6-7 [10.2 kB] Get:715 http://deb.debian.org/debian bookworm/main amd64 node-d3-collection all 1.0.7-5 [11.8 kB] Get:716 http://deb.debian.org/debian bookworm/main amd64 node-d3-contour all 1.3.2-8 [14.1 kB] Get:717 http://deb.debian.org/debian bookworm/main amd64 node-safe-buffer all 5.2.1+~cs2.1.2-3 [15.5 kB] Get:718 http://deb.debian.org/debian bookworm/main amd64 node-iconv-lite all 0.6.3-3 [115 kB] Get:719 http://deb.debian.org/debian bookworm/main amd64 node-d3-queue all 3.0.7-13 [10.2 kB] Get:720 http://deb.debian.org/debian bookworm/main amd64 node-rw all 1.3.3-5 [7428 B] Get:721 http://deb.debian.org/debian bookworm/main amd64 node-commander all 9.4.1-1 [65.3 kB] Get:722 http://deb.debian.org/debian bookworm/main amd64 node-d3-dsv all 1.1.1-9 [13.3 kB] Get:723 http://deb.debian.org/debian bookworm/main amd64 node-d3-fetch all 1.2.0-5 [7556 B] Get:724 http://deb.debian.org/debian bookworm/main amd64 node-d3-quadtree all 1.0.7-4 [13.1 kB] Get:725 http://deb.debian.org/debian bookworm/main amd64 node-d3-force all 1.2.1-5 [368 kB] Get:726 http://deb.debian.org/debian bookworm/main amd64 libjs-d3-format all 1:1.4.1-7 [17.0 kB] Get:727 http://deb.debian.org/debian bookworm/main amd64 node-d3-format all 1:1.4.1-7 [9072 B] Get:728 http://deb.debian.org/debian bookworm/main amd64 node-d3-geo all 1.11.9-6 [53.7 kB] Get:729 http://deb.debian.org/debian bookworm/main amd64 node-d3-hierarchy all 1.1.8-6 [28.7 kB] Get:730 http://deb.debian.org/debian bookworm/main amd64 node-d3-polygon all 1.0.5-5 [7420 B] Get:731 http://deb.debian.org/debian bookworm/main amd64 node-d3-random all 1.1.2-5 [7180 B] Get:732 http://deb.debian.org/debian bookworm/main amd64 node-d3-time all 1.0.11-6 [14.5 kB] Get:733 http://deb.debian.org/debian bookworm/main amd64 node-d3-time-format all 2.1.3-7 [19.1 kB] Get:734 http://deb.debian.org/debian bookworm/main amd64 node-d3-scale all 2.2.2-6 [31.6 kB] Get:735 http://deb.debian.org/debian bookworm/main amd64 node-d3-scale-chromatic all 1.5.0-7 [18.8 kB] Get:736 http://deb.debian.org/debian bookworm/main amd64 node-d3-shape all 1.3.7-5 [40.5 kB] Get:737 http://deb.debian.org/debian bookworm/main amd64 node-d3-voronoi all 1.1.4-5 [17.2 kB] Get:738 http://deb.debian.org/debian bookworm/main amd64 node-d3-zoom all 1.8.3-4 [20.1 kB] Get:739 http://deb.debian.org/debian bookworm/main amd64 node-d3 all 5.16.0-10 [219 kB] Get:740 http://deb.debian.org/debian bookworm/main amd64 ataqv amd64 1.3.0+ds-2 [3402 kB] Get:741 http://deb.debian.org/debian bookworm/main amd64 cython3 amd64 0.29.32-2+b1 [1302 kB] Get:742 http://deb.debian.org/debian bookworm/main amd64 atropos amd64 1.1.31+dfsg-3+b3 [199 kB] Get:743 http://deb.debian.org/debian bookworm/main amd64 python3-bcbio-gff all 0.6.9-1 [33.5 kB] Get:744 http://deb.debian.org/debian bookworm/main amd64 libdsdp-5.8gf amd64 5.8-10 [182 kB] Get:745 http://deb.debian.org/debian bookworm/main amd64 libglpk40 amd64 5.0-1 [400 kB] Get:746 http://deb.debian.org/debian bookworm/main amd64 python3-cvxopt amd64 1.3.0+dfsg-1+b1 [262 kB] Get:747 http://deb.debian.org/debian bookworm/main amd64 python3-isodate all 0.6.1-1 [25.3 kB] Get:748 http://deb.debian.org/debian bookworm/main amd64 python3-more-itertools all 8.10.0-2 [53.0 kB] Get:749 http://deb.debian.org/debian bookworm/main amd64 python3-zipp all 1.0.0-6 [6696 B] Get:750 http://deb.debian.org/debian bookworm/main amd64 python3-importlib-metadata all 4.12.0-1 [24.9 kB] Get:751 http://deb.debian.org/debian bookworm/main amd64 python3-importlib-resources all 5.1.2-2 [19.0 kB] Get:752 http://deb.debian.org/debian bookworm/main amd64 python3-pyrsistent amd64 0.18.1-1+b3 [60.0 kB] Get:753 http://deb.debian.org/debian bookworm/main amd64 python3-jsonschema all 4.10.3-1 [67.9 kB] Get:754 http://deb.debian.org/debian bookworm/main amd64 python3-networkx all 2.8.8-1 [1425 kB] Get:755 http://deb.debian.org/debian bookworm/main amd64 python3-pandas-lib amd64 1.5.3+dfsg-2 [3499 kB] Get:756 http://deb.debian.org/debian bookworm/main amd64 python3-pandas all 1.5.3+dfsg-2 [2885 kB] Get:757 http://deb.debian.org/debian bookworm/main amd64 python3-pyfaidx all 0.7.1-2 [28.0 kB] Get:758 http://deb.debian.org/debian bookworm/main amd64 python3-pyfastx amd64 0.8.4-2 [52.0 kB] Get:759 http://deb.debian.org/debian bookworm/main amd64 python3-treetime all 0.9.4-1 [921 kB] Get:760 http://deb.debian.org/debian bookworm/main amd64 python3-xopen all 1.7.0-2 [16.9 kB] Get:761 http://deb.debian.org/debian bookworm/main amd64 python3-jmespath all 1.0.1-1 [21.1 kB] Get:762 http://deb.debian.org/debian bookworm/main amd64 python3-urllib3 all 1.26.12-1 [117 kB] Get:763 http://deb.debian.org/debian bookworm/main amd64 python3-certifi all 2022.9.24-1 [153 kB] Get:764 http://deb.debian.org/debian bookworm/main amd64 python3-charset-normalizer all 3.0.1-2 [49.3 kB] Get:765 http://deb.debian.org/debian bookworm/main amd64 python3-idna all 3.3-1 [39.4 kB] Get:766 http://deb.debian.org/debian bookworm/main amd64 python3-chardet all 5.1.0+dfsg-2 [110 kB] Get:767 http://deb.debian.org/debian bookworm/main amd64 python3-requests all 2.28.1+dfsg-1 [67.9 kB] Get:768 http://deb.debian.org/debian bookworm/main amd64 python3-botocore all 1.29.27+repack-1 [5502 kB] Get:769 http://deb.debian.org/debian bookworm/main amd64 python3-s3transfer all 0.6.0-1 [53.0 kB] Get:770 http://deb.debian.org/debian bookworm/main amd64 python3-boto3 all 1.26.27+dfsg-1 [187 kB] Get:771 http://deb.debian.org/debian bookworm/main amd64 python3-schedule all 1.1.0-0.2 [12.9 kB] Get:772 http://deb.debian.org/debian bookworm/main amd64 python3-seaborn all 0.12.2-1 [215 kB] Get:773 http://deb.debian.org/debian bookworm/main amd64 python3-cffi-backend amd64 1.15.1-5+b1 [84.6 kB] Get:774 http://deb.debian.org/debian bookworm/main amd64 python3-zstandard amd64 0.20.0-3 [324 kB] Get:775 http://deb.debian.org/debian bookworm/main amd64 python3-pygtrie all 2.2-2 [16.8 kB] Get:776 http://deb.debian.org/debian bookworm/main amd64 seqmagick all 0.8.4-3 [42.6 kB] Get:777 http://deb.debian.org/debian bookworm/main amd64 python3-backcall all 0.2.0-4 [12.1 kB] Get:778 http://deb.debian.org/debian bookworm/main amd64 python3-parso all 0.8.3-1 [67.4 kB] Get:779 http://deb.debian.org/debian bookworm/main amd64 python3-jedi all 0.18.2-1 [689 kB] Get:780 http://deb.debian.org/debian bookworm/main amd64 python3-traitlets all 5.5.0-1 [92.4 kB] Get:781 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib-inline all 0.1.6-2 [8652 B] Get:782 http://deb.debian.org/debian bookworm/main amd64 python3-ptyprocess all 0.7.0-5 [14.7 kB] Get:783 http://deb.debian.org/debian bookworm/main amd64 python3-pexpect all 4.8.0-4 [52.9 kB] Get:784 http://deb.debian.org/debian bookworm/main amd64 python3-pickleshare all 0.7.5-5 [7600 B] Get:785 http://deb.debian.org/debian bookworm/main amd64 python3-wcwidth all 0.2.5+dfsg1-1.1 [21.4 kB] Get:786 http://deb.debian.org/debian bookworm/main amd64 python3-prompt-toolkit all 3.0.36-2 [276 kB] Get:787 http://deb.debian.org/debian bookworm/main amd64 python3-pygments all 2.14.0+dfsg-1 [783 kB] Get:788 http://deb.debian.org/debian bookworm/main amd64 python3-asttokens all 2.2.1-1 [19.8 kB] Get:789 http://deb.debian.org/debian bookworm/main amd64 python3-executing all 1.2.0-2 [22.6 kB] Get:790 http://deb.debian.org/debian bookworm/main amd64 python3-pure-eval all 0.2.2-1 [11.2 kB] Get:791 http://deb.debian.org/debian bookworm/main amd64 python3-stack-data all 0.6.2-3 [21.8 kB] Get:792 http://deb.debian.org/debian bookworm/main amd64 python3-setuptools all 66.1.1-1 [521 kB] Get:793 http://deb.debian.org/debian bookworm/main amd64 python3-ipython all 8.5.0-4 [517 kB] Get:794 http://deb.debian.org/debian bookworm/main amd64 ipython3 all 8.5.0-4 [22.7 kB] Get:795 http://deb.debian.org/debian bookworm/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get:796 http://deb.debian.org/debian bookworm/main amd64 python3-ipdb all 0.13.9-1 [17.1 kB] Get:797 http://deb.debian.org/debian bookworm/main amd64 raxml amd64 8.2.12+dfsg-8+b2 [1481 kB] Get:798 http://deb.debian.org/debian bookworm/main amd64 fasttree amd64 2.1.11-2 [181 kB] Get:799 http://deb.debian.org/debian bookworm/main amd64 vcftools amd64 0.1.16-3+b1 [431 kB] Get:800 http://deb.debian.org/debian bookworm/main amd64 augur all 20.0.0-1 [187 kB] Get:801 http://deb.debian.org/debian bookworm/main amd64 libbamtools2.5.2 amd64 2.5.2+dfsg-4 [149 kB] Get:802 http://deb.debian.org/debian bookworm/main amd64 libmysql++3v5 amd64 3.2.5-2.1+b1 [159 kB] Get:803 http://deb.debian.org/debian bookworm/main amd64 augustus-data all 3.5.0+dfsg-2 [20.3 MB] Get:804 http://deb.debian.org/debian bookworm/main amd64 augustus amd64 3.5.0+dfsg-2 [2048 kB] Get:805 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB] Get:806 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB] Get:807 http://deb.debian.org/debian bookworm/main amd64 autodock amd64 4.2.6-9 [167 kB] Get:808 http://deb.debian.org/debian bookworm/main amd64 libboost-program-options1.74.0 amd64 1.74.0+ds1-21 [329 kB] Get:809 http://deb.debian.org/debian bookworm/main amd64 autodock-vina amd64 1.2.3-2 [261 kB] Get:810 http://deb.debian.org/debian bookworm/main amd64 autogrid amd64 4.2.6-9 [47.9 kB] Get:811 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:812 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:813 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB] Get:814 http://deb.debian.org/debian bookworm/main amd64 libavahi-core7 amd64 0.8-10 [103 kB] Get:815 http://deb.debian.org/debian bookworm/main amd64 libdaemon0 amd64 0.14-7.1 [15.0 kB] Get:816 http://deb.debian.org/debian bookworm/main amd64 avahi-daemon amd64 0.8-10 [82.7 kB] Get:817 http://deb.debian.org/debian bookworm/main amd64 libarchive13 amd64 3.6.2-1 [343 kB] Get:818 http://deb.debian.org/debian bookworm/main amd64 libglew2.2 amd64 2.2.0-4+b1 [175 kB] Get:819 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1+b1 [21.1 kB] Get:820 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1+b1 [7804 B] Get:821 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.8+repack1-1 [1237 kB] Get:822 http://deb.debian.org/debian bookworm/main amd64 libopengl0 amd64 1.6.0-1 [30.6 kB] Get:823 http://deb.debian.org/debian bookworm/main amd64 libqt5concurrent5 amd64 5.15.8+dfsg-11 [42.1 kB] Get:824 http://deb.debian.org/debian bookworm/main amd64 libsymspg1 amd64 2.0.2-1+b3 [188 kB] Get:825 http://deb.debian.org/debian bookworm/main amd64 libavogadro2-1 amd64 1.97.0-3+b1 [1804 kB] Get:826 http://deb.debian.org/debian bookworm/main amd64 avogadro amd64 1.97.0-1 [1255 kB] Get:827 http://deb.debian.org/debian bookworm/main amd64 avogadro-utils amd64 1.97.0-3+b1 [101 kB] Get:828 http://deb.debian.org/debian bookworm/main amd64 libqes0 amd64 0.2.8+ds-1 [15.3 kB] Get:829 http://deb.debian.org/debian bookworm/main amd64 axe-demultiplexer amd64 0.3.3+dfsg-3+b2 [215 kB] Get:830 http://deb.debian.org/debian bookworm/main amd64 baitfisher amd64 1.2.7+git20211020.de26d5c+dfsg-1 [201 kB] Get:831 http://deb.debian.org/debian bookworm/main amd64 libboost-random1.74.0 amd64 1.74.0+ds1-21 [226 kB] Get:832 http://deb.debian.org/debian bookworm/main amd64 bali-phy amd64 3.6.1+dfsg-1 [6210 kB] Get:833 http://deb.debian.org/debian bookworm/main amd64 libboost-serialization1.74.0 amd64 1.74.0+ds1-21 [317 kB] Get:834 http://deb.debian.org/debian bookworm/main amd64 libqt5xml5 amd64 5.15.8+dfsg-11 [122 kB] Get:835 http://deb.debian.org/debian bookworm/main amd64 libball1.5-data all 1.5.0+git20180813.37fc53c-11 [21.1 MB] Get:836 http://deb.debian.org/debian bookworm/main amd64 libball1.5 amd64 1.5.0+git20180813.37fc53c-11 [3190 kB] Get:837 http://deb.debian.org/debian bookworm/main amd64 libglu1-mesa amd64 9.0.2-1.1 [178 kB] Get:838 http://deb.debian.org/debian bookworm/main amd64 libqt5opengl5 amd64 5.15.8+dfsg-11 [148 kB] Get:839 http://deb.debian.org/debian bookworm/main amd64 libqt5test5 amd64 5.15.8+dfsg-11 [146 kB] Get:840 http://deb.debian.org/debian bookworm/main amd64 libqt5webengine-data all 5.15.13+dfsg-1~deb12u1 [7285 kB] Get:841 http://deb.debian.org/debian bookworm/main amd64 libqt5quickwidgets5 amd64 5.15.8+dfsg-3 [39.4 kB] Get:842 http://deb.debian.org/debian bookworm/main amd64 libevent-2.1-7 amd64 2.1.12-stable-8 [180 kB] Get:843 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz-subset0 amd64 6.0.0+dfsg-3 [1931 kB] Get:844 http://deb.debian.org/debian bookworm/main amd64 libminizip1 amd64 1.1-8+deb12u1 [20.1 kB] Get:845 http://deb.debian.org/debian bookworm/main amd64 libopus0 amd64 1.3.1-3 [195 kB] Get:846 http://deb.debian.org/debian bookworm/main amd64 libre2-9 amd64 20220601+dfsg-1+b1 [179 kB] Get:847 http://deb.debian.org/debian bookworm/main amd64 libvpx7 amd64 1.12.0-1+deb12u2 [1003 kB] Get:848 http://deb.debian.org/debian bookworm/main amd64 libqt5webenginecore5 amd64 5.15.13+dfsg-1~deb12u1 [39.9 MB] Get:849 http://deb.debian.org/debian bookworm/main amd64 libqt5webenginewidgets5 amd64 5.15.13+dfsg-1~deb12u1 [118 kB] Get:850 http://deb.debian.org/debian bookworm/main amd64 libballview1.5 amd64 1.5.0+git20180813.37fc53c-11 [1404 kB] Get:851 http://deb.debian.org/debian bookworm/main amd64 ballview amd64 1.5.0+git20180813.37fc53c-11 [198 kB] Get:852 http://deb.debian.org/debian bookworm/main amd64 sysstat amd64 12.6.1-1 [596 kB] Get:853 http://deb.debian.org/debian bookworm/main amd64 parallel all 20221122+ds-2 [1873 kB] Get:854 http://deb.debian.org/debian bookworm/main amd64 bamclipper all 1.0.0-3 [6436 B] Get:855 http://deb.debian.org/debian bookworm/main amd64 bamkit all 0.0.1+git20170413.ccd079d-3 [14.5 kB] Get:856 http://deb.debian.org/debian bookworm/main amd64 libjsoncpp25 amd64 1.9.5-4 [78.6 kB] Get:857 http://deb.debian.org/debian bookworm/main amd64 bamtools amd64 2.5.2+dfsg-4 [193 kB] Get:858 http://deb.debian.org/debian bookworm/main amd64 bandage amd64 0.9.0-2 [971 kB] Get:859 http://deb.debian.org/debian bookworm/main amd64 hmmer amd64 3.3.2+dfsg-1 [1153 kB] Get:860 http://deb.debian.org/debian bookworm/main amd64 bedtools amd64 2.30.0+dfsg-3 [665 kB] Get:861 http://deb.debian.org/debian bookworm/main amd64 barrnap all 0.9+dfsg-3 [204 kB] Get:862 http://deb.debian.org/debian bookworm/main amd64 libmpj-java all 0.44+dfsg-4 [447 kB] Get:863 http://deb.debian.org/debian bookworm/main amd64 bbmap all 39.01+dfsg-2 [8740 kB] Get:864 http://deb.debian.org/debian bookworm/main amd64 bc amd64 1.07.1-3+b1 [110 kB] Get:865 http://deb.debian.org/debian bookworm/main amd64 libgatbcore3 amd64 1.4.2+dfsg-11 [1803 kB] Get:866 http://deb.debian.org/debian bookworm/main amd64 bcalm amd64 2.2.3-4 [34.9 kB] Get:867 http://deb.debian.org/debian bookworm/main amd64 bcftools amd64 1.16-1 [692 kB] Get:868 http://deb.debian.org/debian bookworm/main amd64 libb2-1 amd64 0.98.1-1.1 [40.9 kB] Get:869 http://deb.debian.org/debian bookworm/main amd64 libqt6core6 amd64 6.4.2+dfsg-10 [1613 kB] Get:870 http://deb.debian.org/debian bookworm/main amd64 libqt6dbus6 amd64 6.4.2+dfsg-10 [248 kB] Get:871 http://deb.debian.org/debian bookworm/main amd64 libts0 amd64 1.22-1+b1 [64.6 kB] Get:872 http://deb.debian.org/debian bookworm/main amd64 libqt6gui6 amd64 6.4.2+dfsg-10 [2854 kB] Get:873 http://deb.debian.org/debian bookworm/main amd64 libqt6core5compat6 amd64 6.4.2-1 [134 kB] Get:874 http://deb.debian.org/debian bookworm/main amd64 libquazip1-qt6-1 amd64 1.4-1 [87.2 kB] Get:875 http://deb.debian.org/debian bookworm/main amd64 libodsstream0 amd64 0.9.1-2 [78.9 kB] Get:876 http://deb.debian.org/debian bookworm/main amd64 libqt6widgets6 amd64 6.4.2+dfsg-10 [2445 kB] Get:877 http://deb.debian.org/debian bookworm/main amd64 libqt6printsupport6 amd64 6.4.2+dfsg-10 [211 kB] Get:878 http://deb.debian.org/debian bookworm/main amd64 imagemagick-6.q16 amd64 8:6.9.11.60+dfsg-1.6 [338 kB] Get:879 http://deb.debian.org/debian bookworm/main amd64 imagemagick amd64 8:6.9.11.60+dfsg-1.6 [122 kB] Get:880 http://deb.debian.org/debian bookworm/main amd64 beads amd64 1.1.22-1+b1 [428 kB] Get:881 http://deb.debian.org/debian bookworm/main amd64 beagle all 220722-1 [361 kB] Get:882 http://deb.debian.org/debian bookworm/main amd64 libclc-15-dev all 1:15.0.6-4 [53.6 kB] Get:883 http://deb.debian.org/debian bookworm/main amd64 libc6-i386 amd64 2.36-9+deb12u4 [2459 kB] Get:884 http://deb.debian.org/debian bookworm/main amd64 lib32gcc-s1 amd64 12.2.0-14 [59.7 kB] Get:885 http://deb.debian.org/debian bookworm/main amd64 lib32stdc++6 amd64 12.2.0-14 [644 kB] Get:886 http://deb.debian.org/debian bookworm/main amd64 libclang-common-15-dev amd64 1:15.0.6-4+b1 [5855 kB] Get:887 http://deb.debian.org/debian bookworm/main amd64 libclc-15 all 1:15.0.6-4 [10.1 MB] Get:888 http://deb.debian.org/debian bookworm/main amd64 libclang-cpp15 amd64 1:15.0.6-4+b1 [11.6 MB] Get:889 http://deb.debian.org/debian bookworm/main amd64 libllvmspirvlib15 amd64 15.0.0-2 [719 kB] Get:890 http://deb.debian.org/debian bookworm/main amd64 mesa-opencl-icd amd64 22.3.6-1+deb12u1 [15.5 MB] Get:891 http://deb.debian.org/debian bookworm/main amd64 libhmsbeagle1v5 amd64 3.1.2+dfsg-13 [135 kB] Get:892 http://deb.debian.org/debian bookworm/main amd64 libhmsbeagle-java amd64 3.1.2+dfsg-13 [26.7 kB] Get:893 http://deb.debian.org/debian bookworm/main amd64 libhamcrest-java all 2.2-1 [121 kB] Get:894 http://deb.debian.org/debian bookworm/main amd64 junit4 all 4.13.2-3 [348 kB] Get:895 http://deb.debian.org/debian bookworm/main amd64 libconcurrent-java all 1.3.4-6 [140 kB] Get:896 http://deb.debian.org/debian bookworm/main amd64 libcolt-free-java all 1.2.0+dfsg-7 [434 kB] Get:897 http://deb.debian.org/debian bookworm/main amd64 libcommons-math-java all 2.2-8 [926 kB] Get:898 http://deb.debian.org/debian bookworm/main amd64 libitext1-java all 1.4-7 [1257 kB] Get:899 http://deb.debian.org/debian bookworm/main amd64 libjam-java all 0.1.git20180106.740247a+dfsg-1 [164 kB] Get:900 http://deb.debian.org/debian bookworm/main amd64 libjaxen-java all 1.1.6-4 [214 kB] Get:901 http://deb.debian.org/debian bookworm/main amd64 libjdom1-java all 1.1.3-3 [155 kB] Get:902 http://deb.debian.org/debian bookworm/main amd64 libjebl2-java all 0.1+git20201011.969bd4b-1 [516 kB] Get:903 http://deb.debian.org/debian bookworm/main amd64 libmtj-java all 0.9.14+dfsg-7 [126 kB] Get:904 http://deb.debian.org/debian bookworm/main amd64 libnucleotidelikelihoodcore0 amd64 1.10.4+dfsg-5 [7272 B] Get:905 http://deb.debian.org/debian bookworm/main amd64 f2j amd64 0.8.1+dfsg-5 [163 kB] Get:906 http://deb.debian.org/debian bookworm/main amd64 libf2j-java all 0.8.1+dfsg-5 [62.3 kB] Get:907 http://deb.debian.org/debian bookworm/main amd64 libjlapack-java all 0.8~dfsg-5 [925 kB] Get:908 http://deb.debian.org/debian bookworm/main amd64 libnetlib-java all 0.9.3-7 [451 kB] Get:909 http://deb.debian.org/debian bookworm/main amd64 beast-mcmc all 1.10.4+dfsg-5 [5773 kB] Get:910 http://deb.debian.org/debian bookworm/main amd64 libopenjfx-jni amd64 11.0.11+1-3 [22.1 MB] Get:911 http://deb.debian.org/debian bookworm/main amd64 libopenjfx-java all 11.0.11+1-3 [8903 kB] Get:912 http://deb.debian.org/debian bookworm/main amd64 openjfx amd64 11.0.11+1-3 [6272 B] Get:913 http://deb.debian.org/debian bookworm/main amd64 beast2-mcmc all 2.7.3+dfsg-1 [1772 kB] Get:914 http://deb.debian.org/debian bookworm/main amd64 tcsh amd64 6.24.07-1 [449 kB] Get:915 http://deb.debian.org/debian bookworm/main amd64 bedops amd64 2.4.41+dfsg-1 [1574 kB] Get:916 http://deb.debian.org/debian bookworm/main amd64 libgbtools0 amd64 4.44.1+dfsg-7+b2 [139 kB] Get:917 http://deb.debian.org/debian bookworm/main amd64 belvu amd64 4.44.1+dfsg-7+b2 [1058 kB] Get:918 http://deb.debian.org/debian bookworm/main amd64 libprotobuf32 amd64 3.21.12-3 [932 kB] Get:919 http://deb.debian.org/debian bookworm/main amd64 berkeley-express amd64 1.5.3+dfsg-3+b1 [226 kB] Get:920 http://deb.debian.org/debian bookworm/main amd64 bio-eagle amd64 2.4.1-3+b1 [224 kB] Get:921 http://deb.debian.org/debian bookworm/main amd64 bio-rainbow amd64 2.0.4+dfsg-2 [60.3 kB] Get:922 http://deb.debian.org/debian bookworm/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:923 http://deb.debian.org/debian bookworm/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:924 http://deb.debian.org/debian bookworm/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:925 http://deb.debian.org/debian bookworm/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:926 http://deb.debian.org/debian bookworm/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:927 http://deb.debian.org/debian bookworm/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:928 http://deb.debian.org/debian bookworm/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:929 http://deb.debian.org/debian bookworm/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:930 http://deb.debian.org/debian bookworm/main amd64 libdata-optlist-perl all 0.113-1 [10.6 kB] Get:931 http://deb.debian.org/debian bookworm/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get:932 http://deb.debian.org/debian bookworm/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:933 http://deb.debian.org/debian bookworm/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get:934 http://deb.debian.org/debian bookworm/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get:935 http://deb.debian.org/debian bookworm/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:936 http://deb.debian.org/debian bookworm/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:937 http://deb.debian.org/debian bookworm/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:938 http://deb.debian.org/debian bookworm/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:939 http://deb.debian.org/debian bookworm/main amd64 libclass-load-perl all 0.25-2 [15.3 kB] Get:940 http://deb.debian.org/debian bookworm/main amd64 libclass-load-xs-perl amd64 0.10-2+b1 [14.0 kB] Get:941 http://deb.debian.org/debian bookworm/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:942 http://deb.debian.org/debian bookworm/main amd64 libdevel-globaldestruction-perl all 0.14-4 [7144 B] Get:943 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Get:944 http://deb.debian.org/debian bookworm/main amd64 libclass-c3-perl all 0.35-2 [21.0 kB] Get:945 http://deb.debian.org/debian bookworm/main amd64 libmro-compat-perl all 0.15-2 [11.8 kB] Get:946 http://deb.debian.org/debian bookworm/main amd64 libdevel-overloadinfo-perl all 0.007-1 [7896 B] Get:947 http://deb.debian.org/debian bookworm/main amd64 libsub-exporter-perl all 0.989-1 [50.5 kB] Get:948 http://deb.debian.org/debian bookworm/main amd64 libeval-closure-perl all 0.14-3 [11.2 kB] Get:949 http://deb.debian.org/debian bookworm/main amd64 libdist-checkconflicts-perl all 0.11-2 [10.5 kB] Get:950 http://deb.debian.org/debian bookworm/main amd64 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B] Get:951 http://deb.debian.org/debian bookworm/main amd64 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB] Get:952 http://deb.debian.org/debian bookworm/main amd64 libpackage-stash-xs-perl amd64 0.30-1+b1 [19.8 kB] Get:953 http://deb.debian.org/debian bookworm/main amd64 libmoose-perl amd64 2.2203-1 [794 kB] Get:954 http://deb.debian.org/debian bookworm/main amd64 libtext-csv-perl all 2.02-2 [110 kB] Get:955 http://deb.debian.org/debian bookworm/main amd64 libbambamc0 amd64 0.0.50-6+b1 [39.1 kB] Get:956 http://deb.debian.org/debian bookworm/main amd64 smalt amd64 0.7.6-12 [115 kB] Get:957 http://deb.debian.org/debian bookworm/main amd64 tabix amd64 1.16+ds-3 [457 kB] Get:958 http://deb.debian.org/debian bookworm/main amd64 r-cran-getopt all 1.20.3-3 [35.8 kB] Get:959 http://deb.debian.org/debian bookworm/main amd64 bio-tradis all 1.4.5+dfsg2-1 [86.8 kB] Get:960 http://deb.debian.org/debian bookworm/main amd64 rubygems-integration all 1.18 [6704 B] Get:961 http://deb.debian.org/debian bookworm/main amd64 rake all 13.0.6-3 [83.9 kB] Get:962 http://deb.debian.org/debian bookworm/main amd64 ruby-net-telnet all 0.2.0-1 [13.1 kB] Get:963 http://deb.debian.org/debian bookworm/main amd64 ruby-webrick all 1.8.1-1 [51.4 kB] Get:964 http://deb.debian.org/debian bookworm/main amd64 ruby-xmlrpc all 0.3.2-2 [24.4 kB] Get:965 http://deb.debian.org/debian bookworm/main amd64 libruby amd64 1:3.1 [4972 B] Get:966 http://deb.debian.org/debian bookworm/main amd64 ruby-sdbm amd64 1.0.0-5+b1 [15.4 kB] Get:967 http://deb.debian.org/debian bookworm/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:968 http://deb.debian.org/debian bookworm/main amd64 libruby3.1 amd64 3.1.2-7 [5401 kB] Get:969 http://deb.debian.org/debian bookworm/main amd64 ruby3.1 amd64 3.1.2-7 [663 kB] Get:970 http://deb.debian.org/debian bookworm/main amd64 ruby-rubygems all 3.3.15-2 [293 kB] Get:971 http://deb.debian.org/debian bookworm/main amd64 ruby amd64 1:3.1 [5868 B] Get:972 http://deb.debian.org/debian bookworm/main amd64 bio-vcf all 0.9.5-3 [28.8 kB] Get:973 http://deb.debian.org/debian bookworm/main amd64 bioawk amd64 1.0-4 [56.2 kB] Get:974 http://deb.debian.org/debian bookworm/main amd64 libassuan0 amd64 2.5.5-5 [48.5 kB] Get:975 http://deb.debian.org/debian bookworm/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get:976 http://deb.debian.org/debian bookworm/main amd64 libksba8 amd64 1.6.3-2 [128 kB] Get:977 http://deb.debian.org/debian bookworm/main amd64 libnpth0 amd64 1.6-3 [19.0 kB] Get:978 http://deb.debian.org/debian bookworm/main amd64 dirmngr amd64 2.2.40-1.1 [792 kB] Get:979 http://deb.debian.org/debian bookworm/main amd64 gnupg-l10n all 2.2.40-1.1 [1093 kB] Get:980 http://deb.debian.org/debian bookworm/main amd64 gnupg-utils amd64 2.2.40-1.1 [927 kB] Get:981 http://deb.debian.org/debian bookworm/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get:982 http://deb.debian.org/debian bookworm/main amd64 pinentry-curses amd64 1.2.1-1 [77.4 kB] Get:983 http://deb.debian.org/debian bookworm/main amd64 gpg-agent amd64 2.2.40-1.1 [695 kB] Get:984 http://deb.debian.org/debian bookworm/main amd64 gpg-wks-client amd64 2.2.40-1.1 [541 kB] Get:985 http://deb.debian.org/debian bookworm/main amd64 gpg-wks-server amd64 2.2.40-1.1 [531 kB] Get:986 http://deb.debian.org/debian bookworm/main amd64 gpgsm amd64 2.2.40-1.1 [671 kB] Get:987 http://deb.debian.org/debian bookworm/main amd64 gnupg all 2.2.40-1.1 [846 kB] Get:988 http://deb.debian.org/debian bookworm/main amd64 libgpgme11 amd64 1.18.0-3+b1 [300 kB] Get:989 http://deb.debian.org/debian bookworm/main amd64 libmaus2-2 amd64 2.0.813+ds-1 [1963 kB] Get:990 http://deb.debian.org/debian bookworm/main amd64 biobambam2 amd64 2.0.185+ds-1 [9570 kB] Get:991 http://deb.debian.org/debian bookworm/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get:992 http://deb.debian.org/debian bookworm/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:993 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:994 http://deb.debian.org/debian bookworm/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:995 http://deb.debian.org/debian bookworm/main amd64 libtest-differences-perl all 0.69-1 [18.9 kB] Get:996 http://deb.debian.org/debian bookworm/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:997 http://deb.debian.org/debian bookworm/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:998 http://deb.debian.org/debian bookworm/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:999 http://deb.debian.org/debian bookworm/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get:1000 http://deb.debian.org/debian bookworm/main amd64 bioperl all 1.7.8-1 [246 kB] Get:1001 http://deb.debian.org/debian bookworm/main amd64 libio-pty-perl amd64 1:1.17-1 [34.9 kB] Get:1002 http://deb.debian.org/debian bookworm/main amd64 libipc-run-perl all 20220807.0-1 [104 kB] Get:1003 http://deb.debian.org/debian bookworm/main amd64 libfile-sort-perl all 1.01-3 [21.3 kB] Get:1004 http://deb.debian.org/debian bookworm/main amd64 libbio-perl-run-perl all 1.7.3-9 [605 kB] Get:1005 http://deb.debian.org/debian bookworm/main amd64 clustalw amd64 2.1+lgpl-7 [282 kB] Get:1006 http://deb.debian.org/debian bookworm/main amd64 libbio-tools-run-alignment-clustalw-perl all 1.7.4-3 [24.6 kB] Get:1007 http://deb.debian.org/debian bookworm/main amd64 libfile-slurp-tiny-perl all 0.004-2 [7592 B] Get:1008 http://deb.debian.org/debian bookworm/main amd64 libtree-dagnode-perl all 1.32-1 [61.7 kB] Get:1009 http://deb.debian.org/debian bookworm/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:1010 http://deb.debian.org/debian bookworm/main amd64 liburi-perl all 5.17-1 [90.4 kB] Get:1011 http://deb.debian.org/debian bookworm/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:1012 http://deb.debian.org/debian bookworm/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:1013 http://deb.debian.org/debian bookworm/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:1014 http://deb.debian.org/debian bookworm/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:1015 http://deb.debian.org/debian bookworm/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:1016 http://deb.debian.org/debian bookworm/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:1017 http://deb.debian.org/debian bookworm/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:1018 http://deb.debian.org/debian bookworm/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:1019 http://deb.debian.org/debian bookworm/main amd64 libencode-perl amd64 3.19-1+b1 [1416 kB] Get:1020 http://deb.debian.org/debian bookworm/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:1021 http://deb.debian.org/debian bookworm/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:1022 http://deb.debian.org/debian bookworm/main amd64 libhttp-message-perl all 6.44-1 [81.7 kB] Get:1023 http://deb.debian.org/debian bookworm/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:1024 http://deb.debian.org/debian bookworm/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:1025 http://deb.debian.org/debian bookworm/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:1026 http://deb.debian.org/debian bookworm/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:1027 http://deb.debian.org/debian bookworm/main amd64 libio-socket-ssl-perl all 2.081-2 [219 kB] Get:1028 http://deb.debian.org/debian bookworm/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:1029 http://deb.debian.org/debian bookworm/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:1030 http://deb.debian.org/debian bookworm/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:1031 http://deb.debian.org/debian bookworm/main amd64 libwww-perl all 6.68-1 [186 kB] Get:1032 http://deb.debian.org/debian bookworm/main amd64 libxml-parser-perl amd64 2.46-4 [201 kB] Get:1033 http://deb.debian.org/debian bookworm/main amd64 libxml-perl all 0.08-4 [93.0 kB] Get:1034 http://deb.debian.org/debian bookworm/main amd64 libxml-regexp-perl all 0.04-1.1 [7500 B] Get:1035 http://deb.debian.org/debian bookworm/main amd64 libxml-dom-perl all 1.46-2 [152 kB] Get:1036 http://deb.debian.org/debian bookworm/main amd64 libxml-xpathengine-perl all 0.14-2 [33.5 kB] Get:1037 http://deb.debian.org/debian bookworm/main amd64 libxml-dom-xpath-perl all 0.14-4 [9352 B] Get:1038 http://deb.debian.org/debian bookworm/main amd64 libbio-featureio-perl all 1.6.905-2 [53.2 kB] Get:1039 http://deb.debian.org/debian bookworm/main amd64 libxml-twig-perl all 1:3.52-2 [181 kB] Get:1040 http://deb.debian.org/debian bookworm/main amd64 libxml-writer-perl all 0.900-2 [26.8 kB] Get:1041 http://deb.debian.org/debian bookworm/main amd64 libbio-variation-perl all 1.7.5-3 [72.6 kB] Get:1042 http://deb.debian.org/debian bookworm/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:1043 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:1044 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:1045 http://deb.debian.org/debian bookworm/main amd64 libbio-cluster-perl all 1.7.3-6 [53.3 kB] Get:1046 http://deb.debian.org/debian bookworm/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] Get:1047 http://deb.debian.org/debian bookworm/main amd64 libbio-asn1-entrezgene-perl all 1.730-2 [48.6 kB] Get:1048 http://deb.debian.org/debian bookworm/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:1049 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-expat-perl all 0.51-2 [11.1 kB] Get:1050 http://deb.debian.org/debian bookworm/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:1051 http://deb.debian.org/debian bookworm/main amd64 libbio-eutilities-perl all 1.77-2 [124 kB] Get:1052 http://deb.debian.org/debian bookworm/main amd64 libbio-tools-run-remoteblast-perl all 1.7.3-3 [17.5 kB] Get:1053 http://deb.debian.org/debian bookworm/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:1054 http://deb.debian.org/debian bookworm/main amd64 libfcgi0ldbl amd64 2.4.2-2 [26.1 kB] Get:1055 http://deb.debian.org/debian bookworm/main amd64 libfcgi-perl amd64 0.82+ds-2 [25.2 kB] Get:1056 http://deb.debian.org/debian bookworm/main amd64 libhttp-daemon-perl all 6.16-1 [23.5 kB] Get:1057 http://deb.debian.org/debian bookworm/main amd64 libio-sessiondata-perl all 1.03-3 [6316 B] Get:1058 http://deb.debian.org/debian bookworm/main amd64 libio-stringy-perl all 2.111-3 [56.5 kB] Get:1059 http://deb.debian.org/debian bookworm/main amd64 libconvert-binhex-perl all 1.125-3 [27.4 kB] Get:1060 http://deb.debian.org/debian bookworm/main amd64 libnet-smtp-ssl-perl all 1.04-2 [6548 B] Get:1061 http://deb.debian.org/debian bookworm/main amd64 libmailtools-perl all 2.21-2 [95.6 kB] Get:1062 http://deb.debian.org/debian bookworm/main amd64 libmime-tools-perl all 5.510-1 [213 kB] Get:1063 http://deb.debian.org/debian bookworm/main amd64 libtask-weaken-perl all 1.06-2 [9364 B] Get:1064 http://deb.debian.org/debian bookworm/main amd64 libsoap-lite-perl all 1.27-3 [239 kB] Get:1065 http://deb.debian.org/debian bookworm/main amd64 openjdk-17-jdk-headless amd64 17.0.10+7-1~deb12u1 [71.3 MB] Get:1066 http://deb.debian.org/debian bookworm/main amd64 default-jdk-headless amd64 2:1.17-74 [1108 B] Get:1067 http://deb.debian.org/debian bookworm/main amd64 hyphy-common all 2.5.47+dfsg-1 [586 kB] Get:1068 http://deb.debian.org/debian bookworm/main amd64 hyphy-pt amd64 2.5.47+dfsg-1 [1487 kB] Get:1069 http://deb.debian.org/debian bookworm/main amd64 bioperl-run all 1.7.3-9 [40.6 kB] Get:1070 http://deb.debian.org/debian bookworm/main amd64 libsquid1 amd64 1.9g+cvs20050121-12 [76.6 kB] Get:1071 http://deb.debian.org/debian bookworm/main amd64 biosquid amd64 1.9g+cvs20050121-12 [79.4 kB] Get:1072 http://deb.debian.org/debian bookworm/main amd64 biosyntax-common all 1.0.0b-4 [4560 B] Get:1073 http://deb.debian.org/debian bookworm/main amd64 gedit-common all 44.2-1 [1366 kB] Get:1074 http://deb.debian.org/debian bookworm/main amd64 libgirepository-1.0-1 amd64 1.74.0-3 [101 kB] Get:1075 http://deb.debian.org/debian bookworm/main amd64 gir1.2-glib-2.0 amd64 1.74.0-3 [159 kB] Get:1076 http://deb.debian.org/debian bookworm/main amd64 gir1.2-atk-1.0 amd64 2.46.0-5 [23.7 kB] Get:1077 http://deb.debian.org/debian bookworm/main amd64 gir1.2-freedesktop amd64 1.74.0-3 [37.2 kB] Get:1078 http://deb.debian.org/debian bookworm/main amd64 gir1.2-gdkpixbuf-2.0 amd64 2.42.10+dfsg-1+b1 [13.5 kB] Get:1079 http://deb.debian.org/debian bookworm/main amd64 gir1.2-harfbuzz-0.0 amd64 6.0.0+dfsg-3 [1579 kB] Get:1080 http://deb.debian.org/debian bookworm/main amd64 libpangoxft-1.0-0 amd64 1.50.12+ds-1 [26.7 kB] Get:1081 http://deb.debian.org/debian bookworm/main amd64 gir1.2-pango-1.0 amd64 1.50.12+ds-1 [37.4 kB] Get:1082 http://deb.debian.org/debian bookworm/main amd64 gir1.2-gtk-3.0 amd64 3.24.38-2~deb12u1 [220 kB] Get:1083 http://deb.debian.org/debian bookworm/main amd64 libgtksourceview-4-common all 4.8.4-4 [532 kB] Get:1084 http://deb.debian.org/debian bookworm/main amd64 libgtksourceview-4-0 amd64 4.8.4-4 [216 kB] Get:1085 http://deb.debian.org/debian bookworm/main amd64 gir1.2-gtksource-4 amd64 4.8.4-4 [19.9 kB] Get:1086 http://deb.debian.org/debian bookworm/main amd64 libpeas-common all 1.34.0-1 [54.3 kB] Get:1087 http://deb.debian.org/debian bookworm/main amd64 libpeas-1.0-0 amd64 1.34.0-1+b1 [60.8 kB] Get:1088 http://deb.debian.org/debian bookworm/main amd64 gir1.2-peas-1.0 amd64 1.34.0-1+b1 [7900 B] Get:1089 http://deb.debian.org/debian bookworm/main amd64 python3-gi amd64 3.42.2-3+b1 [219 kB] Get:1090 http://deb.debian.org/debian bookworm/main amd64 python3-cairo amd64 1.20.1-5+b1 [63.1 kB] Get:1091 http://deb.debian.org/debian bookworm/main amd64 python3-gi-cairo amd64 3.42.2-3+b1 [11.7 kB] Get:1092 http://deb.debian.org/debian bookworm/main amd64 libamtk-5-common all 5.6.1-2 [20.8 kB] Get:1093 http://deb.debian.org/debian bookworm/main amd64 libamtk-5-0 amd64 5.6.1-2 [24.4 kB] Get:1094 http://deb.debian.org/debian bookworm/main amd64 libgspell-1-common all 1.12.0-1 [32.9 kB] Get:1095 http://deb.debian.org/debian bookworm/main amd64 hunspell-en-us all 1:2020.12.07-2 [269 kB] Get:1096 http://deb.debian.org/debian bookworm/main amd64 libhunspell-1.7-0 amd64 1.7.1-1 [193 kB] Get:1097 http://deb.debian.org/debian bookworm/main amd64 libenchant-2-2 amd64 2.3.3-2 [47.0 kB] Get:1098 http://deb.debian.org/debian bookworm/main amd64 libgspell-1-2 amd64 1.12.0-1+b2 [52.6 kB] Get:1099 http://deb.debian.org/debian bookworm/main amd64 libtepl-common all 6.4.0-7 [35.3 kB] Get:1100 http://deb.debian.org/debian bookworm/main amd64 libtepl-6-2 amd64 6.4.0-7 [90.8 kB] Get:1101 http://deb.debian.org/debian bookworm/main amd64 gedit amd64 44.2-1 [362 kB] Get:1102 http://deb.debian.org/debian bookworm/main amd64 biosyntax-gedit all 1.0.0b-4 [18.0 kB] Get:1103 http://deb.debian.org/debian bookworm/main amd64 libsource-highlight-common all 3.1.9-4.2 [77.4 kB] Get:1104 http://deb.debian.org/debian bookworm/main amd64 libsource-highlight4v5 amd64 3.1.9-4.2+b3 [257 kB] Get:1105 http://deb.debian.org/debian bookworm/main amd64 source-highlight amd64 3.1.9-4.2+b3 [295 kB] Get:1106 http://deb.debian.org/debian bookworm/main amd64 biosyntax-less all 1.0.0b-4 [12.3 kB] Get:1107 http://deb.debian.org/debian bookworm/main amd64 vim-runtime all 2:9.0.1378-2 [7025 kB] Get:1108 http://deb.debian.org/debian bookworm/main amd64 libgpm2 amd64 1.20.7-10+b1 [14.2 kB] Get:1109 http://deb.debian.org/debian bookworm/main amd64 libsodium23 amd64 1.0.18-1 [161 kB] Get:1110 http://deb.debian.org/debian bookworm/main amd64 vim amd64 2:9.0.1378-2 [1567 kB] Get:1111 http://deb.debian.org/debian bookworm/main amd64 biosyntax-vim all 1.0.0b-4 [24.1 kB] Get:1112 http://deb.debian.org/debian bookworm/main amd64 biosyntax all 1.0.0b-4 [3724 B] Get:1113 http://deb.debian.org/debian bookworm/main amd64 bitseq amd64 0.7.5+dfsg-6 [345 kB] Get:1114 http://deb.debian.org/debian bookworm/main amd64 python3-colorama all 0.4.6-2 [36.8 kB] Get:1115 http://deb.debian.org/debian bookworm/main amd64 python3-click all 8.1.3-2 [92.2 kB] Get:1116 http://deb.debian.org/debian bookworm/main amd64 python3-mypy-extensions all 0.4.3-4 [5788 B] Get:1117 http://deb.debian.org/debian bookworm/main amd64 python3-pathspec all 0.11.0-1 [26.3 kB] Get:1118 http://deb.debian.org/debian bookworm/main amd64 python3-platformdirs all 2.6.0-1 [16.3 kB] Get:1119 http://deb.debian.org/debian bookworm/main amd64 black all 23.1.0-1 [140 kB] Get:1120 http://deb.debian.org/debian bookworm/main amd64 libhdf5-cpp-103-1 amd64 1.10.8+repack1-1 [128 kB] Get:1121 http://deb.debian.org/debian bookworm/main amd64 libpbcopper2.0.0 amd64 2.0.0+dfsg-2 [606 kB] Get:1122 http://deb.debian.org/debian bookworm/main amd64 libpbbam2.1.0 amd64 2.1.0+dfsg-2 [762 kB] Get:1123 http://deb.debian.org/debian bookworm/main amd64 libblasr5.3.5 amd64 5.3.5+dfsg-4+b2 [1094 kB] Get:1124 http://deb.debian.org/debian bookworm/main amd64 libpbseq amd64 5.3.5+dfsg-4+b2 [5764 B] Get:1125 http://deb.debian.org/debian bookworm/main amd64 blasr amd64 5.3.5+dfsg-6 [223 kB] Get:1126 http://deb.debian.org/debian bookworm/main amd64 menu amd64 2.1.49 [371 kB] Get:1127 http://deb.debian.org/debian bookworm/main amd64 blends-common all 0.7.5 [25.2 kB] Get:1128 http://deb.debian.org/debian bookworm/main amd64 blixem amd64 4.44.1+dfsg-7+b2 [1391 kB] Get:1129 http://deb.debian.org/debian bookworm/main amd64 libnlopt0 amd64 2.7.1-5 [174 kB] Get:1130 http://deb.debian.org/debian bookworm/main amd64 bolt-lmm amd64 2.4.0+dfsg-1 [338 kB] Get:1131 http://deb.debian.org/debian bookworm/main amd64 bowtie amd64 1.3.1-1+b1 [1627 kB] Get:1132 http://deb.debian.org/debian bookworm/main amd64 boxshade amd64 3.3.1-14 [55.8 kB] Get:1133 http://deb.debian.org/debian bookworm/main amd64 libbpp-core4 amd64 2.4.1-9 [610 kB] Get:1134 http://deb.debian.org/debian bookworm/main amd64 libbpp-seq12 amd64 2.4.1-9 [497 kB] Get:1135 http://deb.debian.org/debian bookworm/main amd64 libbpp-phyl12 amd64 2.4.1-8 [1672 kB] Get:1136 http://deb.debian.org/debian bookworm/main amd64 libbpp-qt2 amd64 2.4.1-8 [77.7 kB] Get:1137 http://deb.debian.org/debian bookworm/main amd64 bppphyview amd64 0.6.1-4 [105 kB] Get:1138 http://deb.debian.org/debian bookworm/main amd64 libbpp-popgen8 amd64 2.4.1-8 [239 kB] Get:1139 http://deb.debian.org/debian bookworm/main amd64 bppsuite amd64 2.4.1-6 [379 kB] Get:1140 http://deb.debian.org/debian bookworm/main amd64 fastjar amd64 2:0.98-7 [80.1 kB] Get:1141 http://deb.debian.org/debian bookworm/main amd64 jarwrapper all 0.78 [21.8 kB] Get:1142 http://deb.debian.org/debian bookworm/main amd64 libcommons-lang-java all 2.6-10 [273 kB] Get:1143 http://deb.debian.org/debian bookworm/main amd64 libjargs-java all 1.0.0-5 [14.9 kB] Get:1144 http://deb.debian.org/debian bookworm/main amd64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB] Get:1145 http://deb.debian.org/debian bookworm/main amd64 libxerces2-java all 2.12.2-1 [1440 kB] Get:1146 http://deb.debian.org/debian bookworm/main amd64 cgview all 0.0.20100111-7 [2220 kB] Get:1147 http://deb.debian.org/debian bookworm/main amd64 libswing-layout-java all 1.0.4-4.1 [44.4 kB] Get:1148 http://deb.debian.org/debian bookworm/main amd64 brig amd64 0.95+dfsg-3 [115 kB] Get:1149 http://deb.debian.org/debian bookworm/main amd64 btllib-tools amd64 1.4.10+dfsg-1 [138 kB] Get:1150 http://deb.debian.org/debian bookworm/main amd64 bubblewrap amd64 0.8.0-2 [46.8 kB] Get:1151 http://deb.debian.org/debian bookworm/main amd64 libdpkg-perl all 1.21.22 [603 kB] Get:1152 http://deb.debian.org/debian bookworm/main amd64 patch amd64 2.7.6-7 [128 kB] Get:1153 http://deb.debian.org/debian bookworm/main amd64 dpkg-dev all 1.21.22 [1353 kB] Get:1154 http://deb.debian.org/debian bookworm/main amd64 build-essential amd64 12.9 [7704 B] Get:1155 http://deb.debian.org/debian bookworm/main amd64 prodigal amd64 1:2.6.3-6 [508 kB] Get:1156 http://deb.debian.org/debian bookworm/main amd64 busco amd64 5.4.4-1 [71.8 kB] Get:1157 http://deb.debian.org/debian bookworm/main amd64 bustools amd64 0.42.0+dfsg-1 [316 kB] Get:1158 http://deb.debian.org/debian bookworm/main amd64 bwa amd64 0.7.17-7+b2 [212 kB] Get:1159 http://deb.debian.org/debian bookworm/main amd64 bzip2-doc all 1.0.8-5 [514 kB] Get:1160 http://deb.debian.org/debian bookworm/main amd64 libfilesys-df-perl amd64 0.92-7+b1 [11.4 kB] Get:1161 http://deb.debian.org/debian bookworm/main amd64 libfastutil-java all 8.5.11+dfsg-1 [19.6 MB] Get:1162 http://deb.debian.org/debian bookworm/main amd64 jaligner all 1.0+dfsg-10 [132 kB] Get:1163 http://deb.debian.org/debian bookworm/main amd64 libssw-java amd64 1.1-13 [16.7 kB] Get:1164 http://deb.debian.org/debian bookworm/main amd64 mhap all 2.1.3+dfsg-3 [160 kB] Get:1165 http://deb.debian.org/debian bookworm/main amd64 canu amd64 2.0+dfsg-2+b1 [1211 kB] Get:1166 http://deb.debian.org/debian bookworm/main amd64 libgflags2.2 amd64 2.2.2-2 [83.5 kB] Get:1167 http://deb.debian.org/debian bookworm/main amd64 libgoogle-glog0v6 amd64 0.6.0-2 [64.5 kB] Get:1168 http://deb.debian.org/debian bookworm/main amd64 libcassie1v5 amd64 1.0.9-3+b2 [40.7 kB] Get:1169 http://deb.debian.org/debian bookworm/main amd64 cassiopee amd64 1.0.9-3+b2 [18.2 kB] Get:1170 http://deb.debian.org/debian bookworm/main amd64 diamond-aligner amd64 2.1.3-1 [2434 kB] Get:1171 http://deb.debian.org/debian bookworm/main amd64 cat-bat amd64 5.2.3-2 [29.5 kB] Get:1172 http://deb.debian.org/debian bookworm/main amd64 python3-cclib all 1.6.2-2 [180 kB] Get:1173 http://deb.debian.org/debian bookworm/main amd64 cclib all 1.6.2-2 [15.7 kB] Get:1174 http://deb.debian.org/debian bookworm/main amd64 ncbi-data all 6.1.20170106+dfsg1-10 [3557 kB] Get:1175 http://deb.debian.org/debian bookworm/main amd64 liblmdb0 amd64 0.9.24-1 [45.0 kB] Get:1176 http://deb.debian.org/debian bookworm/main amd64 libpcre3 amd64 2:8.39-15 [341 kB] Get:1177 http://deb.debian.org/debian bookworm/main amd64 ncbi-blast+ amd64 2.12.0+ds-3+b1 [11.9 MB] Get:1178 http://deb.debian.org/debian bookworm/main amd64 ncbi-blast+-legacy all 2.12.0+ds-3 [13.5 kB] Get:1179 http://deb.debian.org/debian bookworm/main amd64 liberror-perl all 0.17029-2 [29.0 kB] Get:1180 http://deb.debian.org/debian bookworm/main amd64 libtie-ixhash-perl all 1.23-4 [11.7 kB] Get:1181 http://deb.debian.org/debian bookworm/main amd64 cct all 1:1.0.3-1 [36.3 MB] Get:1182 http://deb.debian.org/debian bookworm/main amd64 libgclib3 amd64 0.12.7+ds-5 [152 kB] Get:1183 http://deb.debian.org/debian bookworm/main amd64 cdbfasta amd64 1.00+git20181005.014498c+dfsg-4+b1 [129 kB] Get:1184 http://deb.debian.org/debian bookworm/main amd64 hisat2 amd64 2.2.1-4+b2 [3658 kB] Get:1185 http://deb.debian.org/debian bookworm/main amd64 libjellyfish-2.0-2 amd64 2.3.0-15+b3 [63.2 kB] Get:1186 http://deb.debian.org/debian bookworm/main amd64 jellyfish amd64 2.3.0-15+b3 [789 kB] Get:1187 http://deb.debian.org/debian bookworm/main amd64 centrifuge amd64 1.0.3-11 [554 kB] Get:1188 http://deb.debian.org/debian bookworm/main amd64 postgresql-client-common all 248 [35.1 kB] Get:1189 http://deb.debian.org/debian bookworm/main amd64 postgresql-client-15 amd64 15.5-0+deb12u1 [1697 kB] Get:1190 http://deb.debian.org/debian bookworm/main amd64 postgresql-client all 15+248 [10.1 kB] Get:1191 http://deb.debian.org/debian bookworm/main amd64 libcarp-clan-perl all 6.08-2 [14.1 kB] Get:1192 http://deb.debian.org/debian bookworm/main amd64 libclass-accessor-grouped-perl all 0.10014-2 [21.7 kB] Get:1193 http://deb.debian.org/debian bookworm/main amd64 libclass-c3-componentised-perl all 1.001002-2 [12.1 kB] Get:1194 http://deb.debian.org/debian bookworm/main amd64 libmodule-pluggable-perl all 5.2-4 [23.6 kB] Get:1195 http://deb.debian.org/debian bookworm/main amd64 libconfig-any-perl all 0.32-3 [29.9 kB] Get:1196 http://deb.debian.org/debian bookworm/main amd64 libcontext-preserve-perl all 0.03-3 [7352 B] Get:1197 http://deb.debian.org/debian bookworm/main amd64 libdata-dumper-concise-perl all 2.023-3 [14.4 kB] Get:1198 http://deb.debian.org/debian bookworm/main amd64 libdbi-perl amd64 1.643-4 [773 kB] Get:1199 http://deb.debian.org/debian bookworm/main amd64 libclone-choose-perl all 0.010-2 [8676 B] Get:1200 http://deb.debian.org/debian bookworm/main amd64 libhash-merge-perl all 0.302-1 [14.7 kB] Get:1201 http://deb.debian.org/debian bookworm/main amd64 libmodule-find-perl all 0.16-2 [10.6 kB] Get:1202 http://deb.debian.org/debian bookworm/main amd64 libclass-method-modifiers-perl all 2.14-1 [18.1 kB] Get:1203 http://deb.debian.org/debian bookworm/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:1204 http://deb.debian.org/debian bookworm/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:1205 http://deb.debian.org/debian bookworm/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:1206 http://deb.debian.org/debian bookworm/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:1207 http://deb.debian.org/debian bookworm/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:1208 http://deb.debian.org/debian bookworm/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get:1209 http://deb.debian.org/debian bookworm/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:1210 http://deb.debian.org/debian bookworm/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:1211 http://deb.debian.org/debian bookworm/main amd64 libsub-name-perl amd64 0.26-2+b1 [12.6 kB] Get:1212 http://deb.debian.org/debian bookworm/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:1213 http://deb.debian.org/debian bookworm/main amd64 libpath-class-perl all 0.37-4 [42.7 kB] Get:1214 http://deb.debian.org/debian bookworm/main amd64 libscope-guard-perl all 0.21-2 [8212 B] Get:1215 http://deb.debian.org/debian bookworm/main amd64 libsql-abstract-perl all 2.000001-2 [116 kB] Get:1216 http://deb.debian.org/debian bookworm/main amd64 libsql-abstract-classic-perl all 1.91-4 [53.9 kB] Get:1217 http://deb.debian.org/debian bookworm/main amd64 libdbix-class-perl all 0.082843-1 [757 kB] Get:1218 http://deb.debian.org/debian bookworm/main amd64 libclass-makemethods-perl all 1.01-7 [293 kB] Get:1219 http://deb.debian.org/debian bookworm/main amd64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:1220 http://deb.debian.org/debian bookworm/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:1221 http://deb.debian.org/debian bookworm/main amd64 libpackage-variant-perl all 1.003002-2 [13.9 kB] Get:1222 http://deb.debian.org/debian bookworm/main amd64 libparse-recdescent-perl all 1.967015+dfsg-4 [147 kB] Get:1223 http://deb.debian.org/debian bookworm/main amd64 libsql-translator-perl all 1.62-3 [391 kB] Get:1224 http://deb.debian.org/debian bookworm/main amd64 libdbd-sqlite3-perl amd64 1.72-1 [179 kB] Get:1225 http://deb.debian.org/debian bookworm/main amd64 libdbicx-testdatabase-perl all 0.05-3 [9292 B] Get:1226 http://deb.debian.org/debian bookworm/main amd64 libdbix-class-tree-nestedset-perl all 0.10-1.1 [17.6 kB] Get:1227 http://deb.debian.org/debian bookworm/main amd64 libbio-chado-schema-perl all 0.20000-3 [88.9 kB] Get:1228 http://deb.debian.org/debian bookworm/main amd64 libclass-accessor-perl all 0.51-2 [22.7 kB] Get:1229 http://deb.debian.org/debian bookworm/main amd64 libclass-trigger-perl all 0.15-2 [12.4 kB] Get:1230 http://deb.debian.org/debian bookworm/main amd64 libdbix-contextualfetch-perl all 1.03-5 [8352 B] Get:1231 http://deb.debian.org/debian bookworm/main amd64 libima-dbi-perl all 0.35-3 [23.3 kB] Get:1232 http://deb.debian.org/debian bookworm/main amd64 libuniversal-moniker-perl all 0.08-10 [6108 B] Get:1233 http://deb.debian.org/debian bookworm/main amd64 libclass-dbi-perl all 3.0.17-5 [106 kB] Get:1234 http://deb.debian.org/debian bookworm/main amd64 libdbd-pg-perl amd64 3.16.0-2 [209 kB] Get:1235 http://deb.debian.org/debian bookworm/main amd64 libclass-dbi-pg-perl all 0.09-6 [9700 B] Get:1236 http://deb.debian.org/debian bookworm/main amd64 libxml-libxslt-perl amd64 2.002001-1 [48.4 kB] Get:1237 http://deb.debian.org/debian bookworm/main amd64 liblog-log4perl-perl all 1.57-1 [367 kB] Get:1238 http://deb.debian.org/debian bookworm/main amd64 libxml-xpath-perl all 1.48-1 [71.0 kB] Get:1239 http://deb.debian.org/debian bookworm/main amd64 libgraphviz-perl all 2.24-1 [92.7 kB] Get:1240 http://deb.debian.org/debian bookworm/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:1241 http://deb.debian.org/debian bookworm/main amd64 libgo-perl all 0.15-9 [268 kB] Get:1242 http://deb.debian.org/debian bookworm/main amd64 libgd-perl amd64 2.76-4+b1 [132 kB] Get:1243 http://deb.debian.org/debian bookworm/main amd64 libdigest-md5-file-perl all 0.08-1.1 [9608 B] Get:1244 http://deb.debian.org/debian bookworm/main amd64 libheap-perl all 0.80-5 [34.3 kB] Get:1245 http://deb.debian.org/debian bookworm/main amd64 libset-object-perl amd64 1.42-1+b2 [37.9 kB] Get:1246 http://deb.debian.org/debian bookworm/main amd64 libgraph-perl all 1:0.9726-1 [110 kB] Get:1247 http://deb.debian.org/debian bookworm/main amd64 libclass-accessor-chained-perl all 0.01.1~debian-5 [8704 B] Get:1248 http://deb.debian.org/debian bookworm/main amd64 libdata-page-perl all 2.03-1 [11.6 kB] Get:1249 http://deb.debian.org/debian bookworm/main amd64 libexporter-lite-perl all 0.09-2 [10.7 kB] Get:1250 http://deb.debian.org/debian bookworm/main amd64 libclass-dbi-pager-perl all 0.08-6 [8112 B] Get:1251 http://deb.debian.org/debian bookworm/main amd64 libappconfig-perl all 1.71-2.2 [66.9 kB] Get:1252 http://deb.debian.org/debian bookworm/main amd64 libtemplate-perl amd64 2.27-1+b5 [564 kB] Get:1253 http://deb.debian.org/debian bookworm/main amd64 libcgi-pm-perl all 4.55-1 [220 kB] Get:1254 http://deb.debian.org/debian bookworm/main amd64 libcgi-session-perl all 4.48-4 [118 kB] Get:1255 http://deb.debian.org/debian bookworm/main amd64 libfreezethaw-perl all 0.5001-3 [16.0 kB] Get:1256 http://deb.debian.org/debian bookworm/main amd64 libdbix-dbschema-perl all 0.47-1 [57.1 kB] Get:1257 http://deb.debian.org/debian bookworm/main amd64 libdbix-dbstag-perl all 0.12-4 [102 kB] Get:1258 http://deb.debian.org/debian bookworm/main amd64 libmodule-build-perl all 0.423200-1 [253 kB] Get:1259 http://deb.debian.org/debian bookworm/main amd64 libchado-perl all 1.31-6 [2281 kB] Get:1260 http://deb.debian.org/debian bookworm/main amd64 chado-utils all 1.31-6 [134 kB] Get:1261 http://deb.debian.org/debian bookworm/main amd64 python3-yaml amd64 6.0-3+b2 [119 kB] Get:1262 http://deb.debian.org/debian bookworm/main amd64 python3-yamlordereddictloader all 0.4.0-1.1 [5040 B] Get:1263 http://deb.debian.org/debian bookworm/main amd64 python3-airr all 1.3.1-1 [33.1 kB] Get:1264 http://deb.debian.org/debian bookworm/main amd64 python3-presto all 0.7.1-1 [53.5 kB] Get:1265 http://deb.debian.org/debian bookworm/main amd64 changeo all 1.3.0-1 [108 kB] Get:1266 http://deb.debian.org/debian bookworm/main amd64 chemical-mime-data all 0.1.94-7.2 [46.7 kB] Get:1267 http://deb.debian.org/debian bookworm/main amd64 microbiomeutil-data all 20101212+dfsg1-5 [1566 kB] Get:1268 http://deb.debian.org/debian bookworm/main amd64 chimeraslayer all 20101212+dfsg1-5 [34.2 kB] Get:1269 http://deb.debian.org/debian bookworm/main amd64 libjheatchart-java all 0.6-1.1 [8364 B] Get:1270 http://deb.debian.org/debian bookworm/main amd64 chromhmm all 1.24+dfsg-1 [196 kB] Get:1271 http://deb.debian.org/debian bookworm/main amd64 chromimpute all 1.0.3+dfsg-4 [74.3 kB] Get:1272 http://deb.debian.org/debian bookworm/main amd64 libcifpp-data all 5.0.7.1-1 [452 kB] Get:1273 http://deb.debian.org/debian bookworm/main amd64 libcifpp5 amd64 5.0.7.1-1 [802 kB] Get:1274 http://deb.debian.org/debian bookworm/main amd64 cif-tools amd64 1.0.7-1 [2146 kB] Get:1275 http://deb.debian.org/debian bookworm/main amd64 python3-et-xmlfile all 1.0.1-2.1 [9180 B] Get:1276 http://deb.debian.org/debian bookworm/main amd64 python3-jdcal all 1.0-1.3 [7904 B] Get:1277 http://deb.debian.org/debian bookworm/main amd64 python3-openpyxl all 3.0.9-1 [161 kB] Get:1278 http://deb.debian.org/debian bookworm/main amd64 libssw0 amd64 1.1-13 [19.7 kB] Get:1279 http://deb.debian.org/debian bookworm/main amd64 python3-joblib all 1.2.0-4 [211 kB] Get:1280 http://deb.debian.org/debian bookworm/main amd64 spades amd64 3.15.5+dfsg-2 [8663 kB] Get:1281 http://deb.debian.org/debian bookworm/main amd64 circlator amd64 1.5.6-7 [4473 kB] Get:1282 http://deb.debian.org/debian bookworm/main amd64 fonts-circos-symbols all 0.69.9+dfsg-2 [46.7 kB] Get:1283 http://deb.debian.org/debian bookworm/main amd64 fonts-cmu all 0.7.0-5 [4892 kB] Get:1284 http://deb.debian.org/debian bookworm/main amd64 libregexp-common-perl all 2017060201-3 [175 kB] Get:1285 http://deb.debian.org/debian bookworm/main amd64 libcarp-always-perl all 0.16-1 [9620 B] Get:1286 http://deb.debian.org/debian bookworm/main amd64 libconfig-general-perl all 2.65-2 [71.8 kB] Get:1287 http://deb.debian.org/debian bookworm/main amd64 libdata-dumper-simple-perl all 0.11-7 [12.5 kB] Get:1288 http://deb.debian.org/debian bookworm/main amd64 libgetopt-simple-perl all 1.52-7 [15.5 kB] Get:1289 http://deb.debian.org/debian bookworm/main amd64 libmath-bezier-perl all 0.01-4 [7032 B] Get:1290 http://deb.debian.org/debian bookworm/main amd64 libmath-round-perl all 0.07-3 [9312 B] Get:1291 http://deb.debian.org/debian bookworm/main amd64 libparams-validate-perl amd64 1.31-1 [64.4 kB] Get:1292 http://deb.debian.org/debian bookworm/main amd64 libreadonly-perl all 2.050-3 [23.1 kB] Get:1293 http://deb.debian.org/debian bookworm/main amd64 libset-intspan-perl all 1.19-3 [25.3 kB] Get:1294 http://deb.debian.org/debian bookworm/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:1295 http://deb.debian.org/debian bookworm/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:1296 http://deb.debian.org/debian bookworm/main amd64 liblist-allutils-perl all 0.19-1 [42.0 kB] Get:1297 http://deb.debian.org/debian bookworm/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:1298 http://deb.debian.org/debian bookworm/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:1299 http://deb.debian.org/debian bookworm/main amd64 libmath-vec-perl all 1.01-5 [17.1 kB] Get:1300 http://deb.debian.org/debian bookworm/main amd64 libspiffy-perl all 0.46-1 [25.7 kB] Get:1301 http://deb.debian.org/debian bookworm/main amd64 libio-all-perl all 0.87-2 [67.3 kB] Get:1302 http://deb.debian.org/debian bookworm/main amd64 libmath-vecstat-perl all 0.08-3 [8408 B] Get:1303 http://deb.debian.org/debian bookworm/main amd64 libgraphics-colornames-perl all 3.5.0-3 [32.1 kB] Get:1304 http://deb.debian.org/debian bookworm/main amd64 libgraphics-colorobject-perl all 0.5.0-10 [29.1 kB] Get:1305 http://deb.debian.org/debian bookworm/main amd64 libtext-format-perl all 0.62-1 [22.7 kB] Get:1306 http://deb.debian.org/debian bookworm/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:1307 http://deb.debian.org/debian bookworm/main amd64 libnumber-format-perl all 1.75-3 [28.9 kB] Get:1308 http://deb.debian.org/debian bookworm/main amd64 libstatistics-basic-perl all 1.6611-3 [61.5 kB] Get:1309 http://deb.debian.org/debian bookworm/main amd64 libsvg-perl all 2.87-1 [64.3 kB] Get:1310 http://deb.debian.org/debian bookworm/main amd64 circos all 0.69.9+dfsg-2 [14.0 MB] Get:1311 http://deb.debian.org/debian bookworm/main amd64 circos-tools all 0.23-1 [18.7 MB] Get:1312 http://deb.debian.org/debian bookworm/main amd64 clearcut amd64 1.0.9+git20211013.b799afe-1 [285 kB] Get:1313 http://deb.debian.org/debian bookworm/main amd64 clonalframe amd64 1.2-11+b2 [52.7 kB] Get:1314 http://deb.debian.org/debian bookworm/main amd64 clonalframeml amd64 1.12-3 [106 kB] Get:1315 http://deb.debian.org/debian bookworm/main amd64 clonalorigin amd64 1.0-6+b2 [164 kB] Get:1316 http://deb.debian.org/debian bookworm/main amd64 libargtable2-0 amd64 13-1.1 [17.9 kB] Get:1317 http://deb.debian.org/debian bookworm/main amd64 clustalo amd64 1.2.4-7 [260 kB] Get:1318 http://deb.debian.org/debian bookworm/main amd64 clustalx amd64 2.1+lgpl-9 [437 kB] Get:1319 http://deb.debian.org/debian bookworm/main amd64 python3-pomegranate amd64 0.14.8-3+b1 [2509 kB] Get:1320 http://deb.debian.org/debian bookworm/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get:1321 http://deb.debian.org/debian bookworm/main amd64 python3-sklearn-lib amd64 1.2.1+dfsg-1 [2567 kB] Get:1322 http://deb.debian.org/debian bookworm/main amd64 python3-sklearn all 1.2.1+dfsg-1 [2103 kB] Get:1323 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biocgenerics all 0.44.0-2 [600 kB] Get:1324 http://deb.debian.org/debian bookworm/main amd64 r-bioc-dnacopy amd64 1.72.3-1 [377 kB] Get:1325 http://deb.debian.org/debian bookworm/main amd64 cnvkit amd64 0.9.9-2+b1 [15.4 MB] Get:1326 http://deb.debian.org/debian bookworm/main amd64 codonw amd64 1.4.4-7 [141 kB] Get:1327 http://deb.debian.org/debian bookworm/main amd64 coinor-libcoinutils3v5 amd64 2.11.4+repack1-2 [440 kB] Get:1328 http://deb.debian.org/debian bookworm/main amd64 coinor-libosi1v5 amd64 0.108.6+repack1-2 [276 kB] Get:1329 http://deb.debian.org/debian bookworm/main amd64 coinor-libclp1 amd64 1.17.6-3 [843 kB] Get:1330 http://deb.debian.org/debian bookworm/main amd64 coinor-libcgl1 amd64 0.60.3+repack1-4 [409 kB] Get:1331 http://deb.debian.org/debian bookworm/main amd64 coinor-libcbc3 amd64 2.10.8+ds1-1 [715 kB] Get:1332 http://deb.debian.org/debian bookworm/main amd64 coinor-cbc amd64 2.10.8+ds1-1 [14.8 kB] Get:1333 http://deb.debian.org/debian bookworm/main amd64 libmstoolkit82 amd64 82-7 [138 kB] Get:1334 http://deb.debian.org/debian bookworm/main amd64 comet-ms amd64 2019015+cleaned1-3 [810 kB] Get:1335 http://deb.debian.org/debian bookworm/main amd64 concavity amd64 0.1+dfsg.1-5 [244 kB] Get:1336 http://deb.debian.org/debian bookworm/main amd64 conservation-code all 20110309.0-8 [24.1 kB] Get:1337 http://deb.debian.org/debian bookworm/main amd64 covtobed amd64 1.3.5+dfsg-1+b1 [49.9 kB] Get:1338 http://deb.debian.org/debian bookworm/main amd64 libgkarrays1 amd64 2.1.0+dfsg-4 [56.8 kB] Get:1339 http://deb.debian.org/debian bookworm/main amd64 libgzstream0 amd64 1.5+git20171107.9a20658-1+b2 [7264 B] Get:1340 http://deb.debian.org/debian bookworm/main amd64 crac amd64 2.5.2+dfsg-5+b1 [465 kB] Get:1341 http://deb.debian.org/debian bookworm/main amd64 python3-csb all 1.2.5+dfsg-8 [2174 kB] Get:1342 http://deb.debian.org/debian bookworm/main amd64 csb all 1.2.5+dfsg-8 [12.5 kB] Get:1343 http://deb.debian.org/debian bookworm/main amd64 curl amd64 7.88.1-10+deb12u5 [315 kB] Get:1344 http://deb.debian.org/debian bookworm/main amd64 python3-dnaio amd64 0.10.0-1+b1 [58.4 kB] Get:1345 http://deb.debian.org/debian bookworm/main amd64 python3-cutadapt amd64 4.2-1+b1 [222 kB] Get:1346 http://deb.debian.org/debian bookworm/main amd64 cutadapt all 4.2-1 [23.5 kB] Get:1347 http://deb.debian.org/debian bookworm/main amd64 python3-cigar all 0.1.3-2 [5468 B] Get:1348 http://deb.debian.org/debian bookworm/main amd64 python3-vcf amd64 0.6.8+git20170215.476169c-9+b1 [43.1 kB] Get:1349 http://deb.debian.org/debian bookworm/main amd64 cutesv all 2.0.2-1 [33.0 kB] Get:1350 http://deb.debian.org/debian bookworm/main amd64 python3-ruamel.yaml.clib amd64 0.2.7-1+b2 [113 kB] Get:1351 http://deb.debian.org/debian bookworm/main amd64 python3-ruamel.yaml all 0.17.21-1 [103 kB] Get:1352 http://deb.debian.org/debian bookworm/main amd64 python3-msgpack amd64 1.0.3-2+b1 [67.3 kB] Get:1353 http://deb.debian.org/debian bookworm/main amd64 python3-cachecontrol all 0.12.12-2 [17.9 kB] Get:1354 http://deb.debian.org/debian bookworm/main amd64 python3-mistune all 2.0.4-1 [21.3 kB] Get:1355 http://deb.debian.org/debian bookworm/main amd64 python3-rdflib all 6.1.1-1 [385 kB] Get:1356 http://deb.debian.org/debian bookworm/main amd64 python3-mistune0 all 0.8.4-2 [15.5 kB] Get:1357 http://deb.debian.org/debian bookworm/main amd64 python3-filelock all 3.9.0-1 [9460 B] Get:1358 http://deb.debian.org/debian bookworm/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get:1359 http://deb.debian.org/debian bookworm/main amd64 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get:1360 http://deb.debian.org/debian bookworm/main amd64 python3-schema-salad amd64 8.4.20230213094415-1 [728 kB] Get:1361 http://deb.debian.org/debian bookworm/main amd64 cwl-upgrader all 1.2.4-1 [14.9 kB] Get:1362 http://deb.debian.org/debian bookworm/main amd64 python3-argcomplete all 2.0.0-1 [34.7 kB] Get:1363 http://deb.debian.org/debian bookworm/main amd64 python3-humanfriendly all 10.0-3 [85.2 kB] Get:1364 http://deb.debian.org/debian bookworm/main amd64 python3-coloredlogs all 15.0.1-1 [47.4 kB] Get:1365 http://deb.debian.org/debian bookworm/main amd64 python3-cwl-utils all 0.22-1 [101 kB] Get:1366 http://deb.debian.org/debian bookworm/main amd64 python3-prov all 2.0.0-2 [95.6 kB] Get:1367 http://deb.debian.org/debian bookworm/main amd64 python3-psutil amd64 5.9.4-1+b1 [189 kB] Get:1368 http://deb.debian.org/debian bookworm/main amd64 python3-pydot all 1.4.2-1 [32.7 kB] Get:1369 http://deb.debian.org/debian bookworm/main amd64 python3-shellescape all 3.4.1-5 [5040 B] Get:1370 http://deb.debian.org/debian bookworm/main amd64 python3-arcp all 0.2.1-6 [13.5 kB] Get:1371 http://deb.debian.org/debian bookworm/main amd64 cwltool all 3.1.20230209161050-1 [483 kB] Get:1372 http://deb.debian.org/debian bookworm/main amd64 daligner amd64 1.0+git20221215.bd26967-1 [234 kB] Get:1373 http://deb.debian.org/debian bookworm/main amd64 damapper amd64 0.0+git20210330.ab45103-1 [106 kB] Get:1374 http://deb.debian.org/debian bookworm/main amd64 dascrubber amd64 1.1-4 [168 kB] Get:1375 http://deb.debian.org/debian bookworm/main amd64 datamash amd64 1.7-2 [342 kB] Get:1376 http://deb.debian.org/debian bookworm/main amd64 dawg amd64 1.2-4+b1 [77.5 kB] Get:1377 http://deb.debian.org/debian bookworm/main amd64 dazzdb amd64 1.0+git20221215.aad3a46-1 [226 kB] Get:1378 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get:1379 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB] Get:1380 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB] Get:1381 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:1382 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:1383 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:1384 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:1385 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB] Get:1386 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB] Get:1387 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:1388 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:1389 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] Get:1390 http://deb.debian.org/debian bookworm/main amd64 openjdk-17-jdk amd64 17.0.10+7-1~deb12u1 [2426 kB] Get:1391 http://deb.debian.org/debian bookworm/main amd64 default-jdk amd64 2:1.17-74 [1068 B] Get:1392 http://deb.debian.org/debian bookworm/main amd64 delly amd64 1.1.6-1 [329 kB] Get:1393 http://deb.debian.org/debian bookworm/main amd64 libccp4-data all 8.0.0-2 [62.3 kB] Get:1394 http://deb.debian.org/debian bookworm/main amd64 libccp4c0 amd64 8.0.0-2 [88.5 kB] Get:1395 http://deb.debian.org/debian bookworm/main amd64 libmmdb2-0 amd64 2.0.22-1 [338 kB] Get:1396 http://deb.debian.org/debian bookworm/main amd64 sfftw2 amd64 2.1.5-6 [247 kB] Get:1397 http://deb.debian.org/debian bookworm/main amd64 libclipper2 amd64 2.1.20201109-1 [1156 kB] Get:1398 http://deb.debian.org/debian bookworm/main amd64 libnewuoa0 amd64 0.1.2-1 [18.6 kB] Get:1399 http://deb.debian.org/debian bookworm/main amd64 libpdb-redo3 amd64 3.0.5-2 [329 kB] Get:1400 http://deb.debian.org/debian bookworm/main amd64 libzeep5.1 amd64 5.1.8-1 [593 kB] Get:1401 http://deb.debian.org/debian bookworm/main amd64 density-fitness amd64 1.0.8-4 [459 kB] Get:1402 http://deb.debian.org/debian bookworm/main amd64 dextractor amd64 1.0-6 [49.8 kB] Get:1403 http://deb.debian.org/debian bookworm/main amd64 dialign amd64 2.2.1-11 [139 kB] Get:1404 http://deb.debian.org/debian bookworm/main amd64 dialign-tx-data all 1.0.2-14 [874 kB] Get:1405 http://deb.debian.org/debian bookworm/main amd64 dialign-tx amd64 1.0.2-14+b1 [86.6 kB] Get:1406 http://deb.debian.org/debian bookworm/main amd64 libcppunit-1.15-0 amd64 1.15.1-4+b1 [151 kB] Get:1407 http://deb.debian.org/debian bookworm/main amd64 gatb-core amd64 1.4.2+dfsg-11 [2582 kB] Get:1408 http://deb.debian.org/debian bookworm/main amd64 discosnp amd64 1:2.6.2-2 [1452 kB] Get:1409 http://deb.debian.org/debian bookworm/main amd64 disulfinder-data all 1.2.11-12 [1127 kB] Get:1410 http://deb.debian.org/debian bookworm/main amd64 disulfinder amd64 1.2.11-12 [239 kB] Get:1411 http://deb.debian.org/debian bookworm/main amd64 dnaclust amd64 3-7+b2 [112 kB] Get:1412 http://deb.debian.org/debian bookworm/main amd64 dnarrange all 1.5.3-1 [18.5 kB] Get:1413 http://deb.debian.org/debian bookworm/main amd64 sgml-data all 2.0.11+nmu1 [179 kB] Get:1414 http://deb.debian.org/debian bookworm/main amd64 docbook-xml all 4.5-12 [85.2 kB] Get:1415 http://deb.debian.org/debian bookworm/main amd64 docutils-common all 0.19+dfsg-6 [127 kB] Get:1416 http://deb.debian.org/debian bookworm/main amd64 dotter amd64 4.44.1+dfsg-7+b2 [614 kB] Get:1417 http://deb.debian.org/debian bookworm/main amd64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB] Get:1418 http://deb.debian.org/debian bookworm/main amd64 libciftools-java all 4.0.5-1 [2139 kB] Get:1419 http://deb.debian.org/debian bookworm/main amd64 libitext5-java all 5.5.13.3-2 [2665 kB] Get:1420 http://deb.debian.org/debian bookworm/main amd64 libjackson2-annotations-java all 2.14.0-1 [68.8 kB] Get:1421 http://deb.debian.org/debian bookworm/main amd64 libjackson2-core-java all 2.14.1-1 [447 kB] Get:1422 http://deb.debian.org/debian bookworm/main amd64 libjackson2-databind-java all 2.14.0-1 [1584 kB] Get:1423 http://deb.debian.org/debian bookworm/main amd64 libactivation-java all 1.2.0-2 [84.7 kB] Get:1424 http://deb.debian.org/debian bookworm/main amd64 libjaxb-api-java all 2.3.1-1 [119 kB] Get:1425 http://deb.debian.org/debian bookworm/main amd64 libargs4j-java all 2.33-2 [138 kB] Get:1426 http://deb.debian.org/debian bookworm/main amd64 libdom4j-java all 2.1.3-2 [310 kB] Get:1427 http://deb.debian.org/debian bookworm/main amd64 libmaven-shared-utils-java all 3.3.4-1 [138 kB] Get:1428 http://deb.debian.org/debian bookworm/main amd64 libaopalliance-java all 20070526-7 [8572 B] Get:1429 http://deb.debian.org/debian bookworm/main amd64 libguice-java all 4.2.3-2 [1435 kB] Get:1430 http://deb.debian.org/debian bookworm/main amd64 libmaven-parent-java all 35-1 [6140 B] Get:1431 http://deb.debian.org/debian bookworm/main amd64 libplexus-utils2-java all 3.4.2-1 [258 kB] Get:1432 http://deb.debian.org/debian bookworm/main amd64 libwagon-provider-api-java all 3.5.3-1 [48.2 kB] Get:1433 http://deb.debian.org/debian bookworm/main amd64 libmaven-resolver-java all 1.6.3-1 [548 kB] Get:1434 http://deb.debian.org/debian bookworm/main amd64 libplexus-cipher-java all 2.0-1 [14.9 kB] Get:1435 http://deb.debian.org/debian bookworm/main amd64 libplexus-classworlds-java all 2.7.0-1 [50.6 kB] Get:1436 http://deb.debian.org/debian bookworm/main amd64 libplexus-component-annotations-java all 2.1.1-1 [7660 B] Get:1437 http://deb.debian.org/debian bookworm/main amd64 libplexus-interpolation-java all 1.26-1 [76.8 kB] Get:1438 http://deb.debian.org/debian bookworm/main amd64 libplexus-sec-dispatcher-java all 2.0-3 [28.3 kB] Get:1439 http://deb.debian.org/debian bookworm/main amd64 libgeronimo-interceptor-3.0-spec-java all 1.0.1-4 [8484 B] Get:1440 http://deb.debian.org/debian bookworm/main amd64 libcdi-api-java all 1.2-3 [54.3 kB] Get:1441 http://deb.debian.org/debian bookworm/main amd64 libsisu-inject-java all 0.3.4-2 [347 kB] Get:1442 http://deb.debian.org/debian bookworm/main amd64 libsisu-plexus-java all 0.3.4-3 [181 kB] Get:1443 http://deb.debian.org/debian bookworm/main amd64 libmaven3-core-java all 3.8.7-1 [1572 kB] Get:1444 http://deb.debian.org/debian bookworm/main amd64 libmaven-shared-io-java all 3.0.0-4 [33.2 kB] Get:1445 http://deb.debian.org/debian bookworm/main amd64 libmaven-file-management-java all 3.0.0-1 [35.1 kB] Get:1446 http://deb.debian.org/debian bookworm/main amd64 libplexus-io-java all 3.3.1-2 [65.3 kB] Get:1447 http://deb.debian.org/debian bookworm/main amd64 libxz-java all 1.9-1 [143 kB] Get:1448 http://deb.debian.org/debian bookworm/main amd64 libplexus-archiver-java all 4.6.1-1 [187 kB] Get:1449 http://deb.debian.org/debian bookworm/main amd64 libjsoup-java all 1.15.3-1 [431 kB] Get:1450 http://deb.debian.org/debian bookworm/main amd64 libwagon-http-java all 3.5.3-1 [49.5 kB] Get:1451 http://deb.debian.org/debian bookworm/main amd64 libistack-commons-java all 3.0.6-5 [145 kB] Get:1452 http://deb.debian.org/debian bookworm/main amd64 libcodemodel-java all 2.6+jaxb2.3.0.1-10.1 [164 kB] Get:1453 http://deb.debian.org/debian bookworm/main amd64 librelaxng-datatype-java all 1.0+ds1-3.1 [11.7 kB] Get:1454 http://deb.debian.org/debian bookworm/main amd64 librngom-java all 2.3.0.1-10.1 [290 kB] Get:1455 http://deb.debian.org/debian bookworm/main amd64 libxsom-java all 2.3.0.1-10.1 [400 kB] Get:1456 http://deb.debian.org/debian bookworm/main amd64 libtxw2-java all 2.3.0.1-10.1 [134 kB] Get:1457 http://deb.debian.org/debian bookworm/main amd64 libdtd-parser-java all 1.2-1 [64.9 kB] Get:1458 http://deb.debian.org/debian bookworm/main amd64 libstax-ex-java all 1.7.8-3 [40.9 kB] Get:1459 http://deb.debian.org/debian bookworm/main amd64 libstreambuffer-java all 1.5.4-1.1 [74.0 kB] Get:1460 http://deb.debian.org/debian bookworm/main amd64 libfastinfoset-java all 1.2.12-3 [343 kB] Get:1461 http://deb.debian.org/debian bookworm/main amd64 libjaxb-java all 2.3.0.1-10.1 [1973 kB] Get:1462 http://deb.debian.org/debian bookworm/main amd64 libinchi1 amd64 1.03+dfsg-4+b2 [436 kB] Get:1463 http://deb.debian.org/debian bookworm/main amd64 libjni-inchi-jni amd64 0.8+dfsg-7 [9064 B] Get:1464 http://deb.debian.org/debian bookworm/main amd64 libcommons-exec-java all 1.3-2 [48.1 kB] Get:1465 http://deb.debian.org/debian bookworm/main amd64 libexec-maven-plugin-java all 3.1.0-1 [66.2 kB] Get:1466 http://deb.debian.org/debian bookworm/main amd64 libmaven-shared-incremental-java all 1.1-3 [9524 B] Get:1467 http://deb.debian.org/debian bookworm/main amd64 libxbean-reflect-java all 4.5-8 [133 kB] Get:1468 http://deb.debian.org/debian bookworm/main amd64 libplexus-container-default-java all 2.1.1-1 [193 kB] Get:1469 http://deb.debian.org/debian bookworm/main amd64 libplexus-compiler-java all 2.12.1-1 [99.8 kB] Get:1470 http://deb.debian.org/debian bookworm/main amd64 libqdox2-java all 2.0.3-1 [296 kB] Get:1471 http://deb.debian.org/debian bookworm/main amd64 libplexus-languages-java all 1.1.1-2 [47.3 kB] Get:1472 http://deb.debian.org/debian bookworm/main amd64 libmaven-compiler-plugin-java all 3.10.1-2 [59.0 kB] Get:1473 http://deb.debian.org/debian bookworm/main amd64 libjni-inchi-java all 0.8+dfsg-7 [33.2 kB] Get:1474 http://deb.debian.org/debian bookworm/main amd64 libnaga-java all 3.0+svn80-5 [43.5 kB] Get:1475 http://deb.debian.org/debian bookworm/main amd64 libjmol-java all 14.32.83+dfsg-2 [8699 kB] Get:1476 http://deb.debian.org/debian bookworm/main amd64 libjson-simple-java all 2.3.0-1 [63.8 kB] Get:1477 http://deb.debian.org/debian bookworm/main amd64 libmaven-archiver-java all 3.6.0-1 [25.1 kB] Get:1478 http://deb.debian.org/debian bookworm/main amd64 libmaven-jar-plugin-java all 3.3.0-2 [24.0 kB] Get:1479 http://deb.debian.org/debian bookworm/main amd64 libmsgpack-java all 0.9.3-1 [155 kB] Get:1480 http://deb.debian.org/debian bookworm/main amd64 libmmtf-java all 1.0.11-1 [187 kB] Get:1481 http://deb.debian.org/debian bookworm/main amd64 libvecmath-java all 1.5.2-7 [97.0 kB] Get:1482 http://deb.debian.org/debian bookworm/main amd64 libbiojava6-java all 6.1.0+dfsg-4 [5367 kB] Get:1483 http://deb.debian.org/debian bookworm/main amd64 libcommons-collections4-java all 4.2-1 [662 kB] Get:1484 http://deb.debian.org/debian bookworm/main amd64 libla4j-java all 0.6.0-4 [228 kB] Get:1485 http://deb.debian.org/debian bookworm/main amd64 libyaml-snake-java all 1.33-2 [321 kB] Get:1486 http://deb.debian.org/debian bookworm/main amd64 picard-tools all 2.27.5+dfsg-2 [311 kB] Get:1487 http://deb.debian.org/debian bookworm/main amd64 drop-seq-tools all 2.5.2+dfsg-1 [513 kB] Get:1488 http://deb.debian.org/debian bookworm/main amd64 dssp amd64 4.2.2-2 [624 kB] Get:1489 http://deb.debian.org/debian bookworm/main amd64 libkpathsea6 amd64 2022.20220321.62855-5.1+deb12u1 [152 kB] Get:1490 http://deb.debian.org/debian bookworm/main amd64 libptexenc1 amd64 2022.20220321.62855-5.1+deb12u1 [43.7 kB] Get:1491 http://deb.debian.org/debian bookworm/main amd64 libsynctex2 amd64 2022.20220321.62855-5.1+deb12u1 [59.8 kB] Get:1492 http://deb.debian.org/debian bookworm/main amd64 libtexlua53-5 amd64 2022.20220321.62855-5.1+deb12u1 [111 kB] Get:1493 http://deb.debian.org/debian bookworm/main amd64 libtexluajit2 amd64 2022.20220321.62855-5.1+deb12u1 [246 kB] Get:1494 http://deb.debian.org/debian bookworm/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:1495 http://deb.debian.org/debian bookworm/main amd64 tex-common all 6.18 [32.5 kB] Get:1496 http://deb.debian.org/debian bookworm/main amd64 libteckit0 amd64 2.5.11+ds1-1+b1 [335 kB] Get:1497 http://deb.debian.org/debian bookworm/main amd64 libzzip-0-13 amd64 0.13.72+dfsg.1-1.1 [58.3 kB] Get:1498 http://deb.debian.org/debian bookworm/main amd64 texlive-binaries amd64 2022.20220321.62855-5.1+deb12u1 [10.5 MB] Get:1499 http://deb.debian.org/debian bookworm/main amd64 libgs-common all 10.0.0~dfsg-11+deb12u3 [148 kB] Get:1500 http://deb.debian.org/debian bookworm/main amd64 libgs10-common all 10.0.0~dfsg-11+deb12u3 [586 kB] Get:1501 http://deb.debian.org/debian bookworm/main amd64 libidn12 amd64 1.41-1 [83.8 kB] Get:1502 http://deb.debian.org/debian bookworm/main amd64 libijs-0.35 amd64 0.35-15 [16.4 kB] Get:1503 http://deb.debian.org/debian bookworm/main amd64 libjbig2dec0 amd64 0.19-3 [67.2 kB] Get:1504 http://deb.debian.org/debian bookworm/main amd64 libgs10 amd64 10.0.0~dfsg-11+deb12u3 [2465 kB] Get:1505 http://deb.debian.org/debian bookworm/main amd64 ghostscript amd64 10.0.0~dfsg-11+deb12u3 [56.9 kB] Get:1506 http://deb.debian.org/debian bookworm/main amd64 dvipng amd64 1.15-1.1+b1 [88.1 kB] Get:1507 http://deb.debian.org/debian bookworm/main amd64 libpotrace0 amd64 1.16-2 [26.2 kB] Get:1508 http://deb.debian.org/debian bookworm/main amd64 dvisvgm amd64 3.0.3-1 [1035 kB] Get:1509 http://deb.debian.org/debian bookworm/main amd64 dwgsim amd64 0.1.14-2 [42.9 kB] Get:1510 http://deb.debian.org/debian bookworm/main amd64 e-mem amd64 1.0.1-5 [34.8 kB] Get:1511 http://deb.debian.org/debian bookworm/main amd64 r-cran-survival amd64 3.5-3-1 [5910 kB] Get:1512 http://deb.debian.org/debian bookworm/main amd64 r-cran-formula all 1.2-4-1 [175 kB] Get:1513 http://deb.debian.org/debian bookworm/main amd64 r-cran-png amd64 0.1-8-1 [41.1 kB] Get:1514 http://deb.debian.org/debian bookworm/main amd64 r-cran-jpeg amd64 0.1-10-1 [30.8 kB] Get:1515 http://deb.debian.org/debian bookworm/main amd64 r-cran-deldir amd64 1.0-6-1+b1 [277 kB] Get:1516 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcppeigen amd64 0.3.3.9.3-1 [1191 kB] Get:1517 http://deb.debian.org/debian bookworm/main amd64 r-cran-interp amd64 1.1-3-1 [1016 kB] Get:1518 http://deb.debian.org/debian bookworm/main amd64 r-cran-latticeextra all 0.6-30-1 [2194 kB] Get:1519 http://deb.debian.org/debian bookworm/main amd64 r-cran-cluster amd64 2.1.4-1 [567 kB] Get:1520 http://deb.debian.org/debian bookworm/main amd64 r-cran-rpart amd64 4.1.19-1 [917 kB] Get:1521 http://deb.debian.org/debian bookworm/main amd64 r-cran-nnet amd64 7.3-18-1 [112 kB] Get:1522 http://deb.debian.org/debian bookworm/main amd64 r-cran-foreign amd64 0.8.84-1 [250 kB] Get:1523 http://deb.debian.org/debian bookworm/main amd64 r-cran-gridextra all 2.3-3 [1024 kB] Get:1524 http://deb.debian.org/debian bookworm/main amd64 r-cran-data.table amd64 1.14.8+dfsg-1 [1683 kB] Get:1525 http://deb.debian.org/debian bookworm/main amd64 r-cran-stringi amd64 1.7.12-1 [858 kB] Get:1526 http://deb.debian.org/debian bookworm/main amd64 r-cran-stringr all 1.5.0-1 [295 kB] Get:1527 http://deb.debian.org/debian bookworm/main amd64 r-cran-evaluate all 0.20-1 [85.9 kB] Get:1528 http://deb.debian.org/debian bookworm/main amd64 r-cran-xfun amd64 0.37+dfsg-1 [394 kB] Get:1529 http://deb.debian.org/debian bookworm/main amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [397 kB] Get:1530 http://deb.debian.org/debian bookworm/main amd64 r-cran-highr all 0.10+dfsg-1 [38.1 kB] Get:1531 http://deb.debian.org/debian bookworm/main amd64 r-cran-yaml amd64 2.3.7-1 [104 kB] Get:1532 http://deb.debian.org/debian bookworm/main amd64 r-cran-knitr all 1.42+dfsg-1 [901 kB] Get:1533 http://deb.debian.org/debian bookworm/main amd64 r-cran-backports amd64 1.4.1-1 [101 kB] Get:1534 http://deb.debian.org/debian bookworm/main amd64 r-cran-checkmate amd64 2.1.0-1 [616 kB] Get:1535 http://deb.debian.org/debian bookworm/main amd64 r-cran-digest amd64 0.6.31-1 [184 kB] Get:1536 http://deb.debian.org/debian bookworm/main amd64 r-cran-base64enc amd64 0.1-3-3 [27.9 kB] Get:1537 http://deb.debian.org/debian bookworm/main amd64 r-cran-fastmap amd64 1.1.1-1 [68.9 kB] Get:1538 http://deb.debian.org/debian bookworm/main amd64 r-cran-ellipsis amd64 0.3.2-2 [35.1 kB] Get:1539 http://deb.debian.org/debian bookworm/main amd64 r-cran-htmltools amd64 0.5.4-1 [364 kB] Get:1540 http://deb.debian.org/debian bookworm/main amd64 r-cran-jsonlite amd64 1.8.4+dfsg-1 [442 kB] Get:1541 http://deb.debian.org/debian bookworm/main amd64 libuv1 amd64 1.44.2-1 [140 kB] Get:1542 http://deb.debian.org/debian bookworm/main amd64 r-cran-fs amd64 1.6.1+dfsg-1 [226 kB] Get:1543 http://deb.debian.org/debian bookworm/main amd64 r-cran-rappdirs amd64 0.3.3-1 [47.4 kB] Get:1544 http://deb.debian.org/debian bookworm/main amd64 r-cran-sass amd64 0.4.5+dfsg-1 [942 kB] Get:1545 http://deb.debian.org/debian bookworm/main amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.1 kB] Get:1546 http://deb.debian.org/debian bookworm/main amd64 r-cran-cachem amd64 1.0.7-1 [71.6 kB] Get:1547 http://deb.debian.org/debian bookworm/main amd64 r-cran-memoise all 2.0.1-1 [53.8 kB] Get:1548 http://deb.debian.org/debian bookworm/main amd64 r-cran-mime amd64 0.12-1+b1 [36.0 kB] Get:1549 http://deb.debian.org/debian bookworm/main amd64 node-bootstrap-sass all 3.4.3-2 [186 kB] Get:1550 http://deb.debian.org/debian bookworm/main amd64 javascript-common all 11+nmu1 [6260 B] Get:1551 http://deb.debian.org/debian bookworm/main amd64 libjs-popper.js all 1.16.1+ds-6 [52.4 kB] Get:1552 http://deb.debian.org/debian bookworm/main amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [517 kB] Get:1553 http://deb.debian.org/debian bookworm/main amd64 r-cran-bslib all 0.4.2+dfsg-1 [3773 kB] Get:1554 http://deb.debian.org/debian bookworm/main amd64 r-cran-tinytex all 0.44-1 [138 kB] Get:1555 http://deb.debian.org/debian bookworm/main amd64 libjs-modernizr all 2.6.2+ds1-5 [47.1 kB] Get:1556 http://deb.debian.org/debian bookworm/main amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [41.7 kB] Get:1557 http://deb.debian.org/debian bookworm/main amd64 pandoc-data all 2.17.1.1-2~deb12u1 [418 kB] Get:1558 http://deb.debian.org/debian bookworm/main amd64 pandoc amd64 2.17.1.1-2~deb12u1 [21.3 MB] Get:1559 http://deb.debian.org/debian bookworm/main amd64 r-cran-later amd64 1.3.0+dfsg-1+b1 [117 kB] Get:1560 http://deb.debian.org/debian bookworm/main amd64 r-cran-promises amd64 1.2.0.1+dfsg-1 [274 kB] Get:1561 http://deb.debian.org/debian bookworm/main amd64 r-cran-httpuv amd64 1.6.9+dfsg-1 [478 kB] Get:1562 http://deb.debian.org/debian bookworm/main amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] Get:1563 http://deb.debian.org/debian bookworm/main amd64 r-cran-fontawesome all 0.5.0-1 [1304 kB] Get:1564 http://deb.debian.org/debian bookworm/main amd64 r-cran-sourcetools amd64 0.1.7-1-1 [45.9 kB] Get:1565 http://deb.debian.org/debian bookworm/main amd64 r-cran-crayon all 1.5.2-1 [165 kB] Get:1566 http://deb.debian.org/debian bookworm/main amd64 r-cran-commonmark amd64 1.8.1-1 [117 kB] Get:1567 http://deb.debian.org/debian bookworm/main amd64 libjs-json all 0~20221030+~1.0.8-1 [20.0 kB] Get:1568 http://deb.debian.org/debian bookworm/main amd64 libjs-es5-shim all 4.6.7-2 [47.4 kB] Get:1569 http://deb.debian.org/debian bookworm/main amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [32.1 kB] Get:1570 http://deb.debian.org/debian bookworm/main amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.2 kB] Get:1571 http://deb.debian.org/debian bookworm/main amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3672 B] Get:1572 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [52.1 kB] Get:1573 http://deb.debian.org/debian bookworm/main amd64 libjs-d3 all 3.5.17-4 [132 kB] Get:1574 http://deb.debian.org/debian bookworm/main amd64 node-html5shiv all 3.7.3+dfsg-5 [13.2 kB] Get:1575 http://deb.debian.org/debian bookworm/main amd64 r-cran-shiny all 1.7.4+dfsg-2+deb12u1 [2751 kB] Get:1576 http://deb.debian.org/debian bookworm/main amd64 r-cran-rmarkdown all 2.20+dfsg-1 [2265 kB] Get:1577 http://deb.debian.org/debian bookworm/main amd64 r-cran-htmlwidgets all 1.6.1+dfsg-1 [120 kB] Get:1578 http://deb.debian.org/debian bookworm/main amd64 r-cran-rstudioapi all 0.14-1 [281 kB] Get:1579 http://deb.debian.org/debian bookworm/main amd64 r-cran-generics all 0.1.3-1 [81.4 kB] Get:1580 http://deb.debian.org/debian bookworm/main amd64 r-cran-tidyselect amd64 1.2.0+dfsg-1 [219 kB] Get:1581 http://deb.debian.org/debian bookworm/main amd64 r-cran-dplyr amd64 1.0.10-1 [1227 kB] Get:1582 http://deb.debian.org/debian bookworm/main amd64 r-cran-purrr amd64 1.0.1-1 [507 kB] Get:1583 http://deb.debian.org/debian bookworm/main amd64 r-cran-cpp11 all 0.4.3-1 [223 kB] Get:1584 http://deb.debian.org/debian bookworm/main amd64 r-cran-tidyr amd64 1.3.0-1 [1183 kB] Get:1585 http://deb.debian.org/debian bookworm/main amd64 r-cran-htmltable all 2.4.1-1 [386 kB] Get:1586 http://deb.debian.org/debian bookworm/main amd64 r-cran-viridis all 0.6.2-1 [2976 kB] Get:1587 http://deb.debian.org/debian bookworm/main amd64 r-cran-chron amd64 2.3-59-1 [194 kB] Get:1588 http://deb.debian.org/debian bookworm/main amd64 r-cran-acepack amd64 1.4.1-2+b5 [59.7 kB] Get:1589 http://deb.debian.org/debian bookworm/main amd64 r-cran-hmisc amd64 4.8-0-1 [3242 kB] Get:1590 http://deb.debian.org/debian bookworm/main amd64 ea-utils amd64 1.1.2+dfsg-9+b2 [236 kB] Get:1591 http://deb.debian.org/debian bookworm/main amd64 ecopcr amd64 1.0.1+dfsg-4 [57.2 kB] Get:1592 http://deb.debian.org/debian bookworm/main amd64 edtsurf amd64 0.2009-10 [155 kB] Get:1593 http://deb.debian.org/debian bookworm/main amd64 libtmglib3 amd64 3.11.0-2 [128 kB] Get:1594 http://deb.debian.org/debian bookworm/main amd64 liblapacke amd64 3.11.0-2 [369 kB] Get:1595 http://deb.debian.org/debian bookworm/main amd64 eigensoft amd64 8.0.0+dfsg-1 [520 kB] Get:1596 http://deb.debian.org/debian bookworm/main amd64 elph amd64 1.0.1-5 [52.3 kB] Get:1597 http://deb.debian.org/debian bookworm/main amd64 embassy-domainatrix amd64 0.1.660-4 [62.9 kB] Get:1598 http://deb.debian.org/debian bookworm/main amd64 embassy-domalign amd64 0.1.660-4 [68.1 kB] Get:1599 http://deb.debian.org/debian bookworm/main amd64 embassy-domsearch amd64 1:0.1.660-3 [61.9 kB] Get:1600 http://deb.debian.org/debian bookworm/main amd64 emmax amd64 0~beta.20100307-3 [27.3 kB] Get:1601 http://deb.debian.org/debian bookworm/main amd64 enchant-2 amd64 2.3.3-2 [14.7 kB] Get:1602 http://deb.debian.org/debian bookworm/main amd64 epstool amd64 3.09-4 [110 kB] Get:1603 http://deb.debian.org/debian bookworm/main amd64 estscan amd64 3.0.3-6 [53.7 kB] Get:1604 http://deb.debian.org/debian bookworm/main amd64 examl amd64 3.0.22-3+b2 [951 kB] Get:1605 http://deb.debian.org/debian bookworm/main amd64 exonerate amd64 2.4.0-5 [1616 kB] Get:1606 http://deb.debian.org/debian bookworm/main amd64 libfakeroot amd64 1.31-1.2 [28.3 kB] Get:1607 http://deb.debian.org/debian bookworm/main amd64 fakeroot amd64 1.31-1.2 [66.9 kB] Get:1608 http://deb.debian.org/debian bookworm/main amd64 fasta3 amd64 36.3.8i.14-Nov-2020-1 [924 kB] Get:1609 http://deb.debian.org/debian bookworm/main amd64 libdisorder0 amd64 0.0.2+git20130809.8062ee1-4+b1 [4884 B] Get:1610 http://deb.debian.org/debian bookworm/main amd64 libfastahack0 amd64 1.0.0+dfsg-10 [25.7 kB] Get:1611 http://deb.debian.org/debian bookworm/main amd64 fastahack amd64 1.0.0+dfsg-10 [12.7 kB] Get:1612 http://deb.debian.org/debian bookworm/main amd64 fastani amd64 1.33-2+b2 [103 kB] Get:1613 http://deb.debian.org/debian bookworm/main amd64 fastdnaml amd64 1.2.2-15 [61.7 kB] Get:1614 http://deb.debian.org/debian bookworm/main amd64 fastlink amd64 4.1P-fix100+dfsg-4 [253 kB] Get:1615 http://deb.debian.org/debian bookworm/main amd64 fastml amd64 3.11-3 [925 kB] Get:1616 http://deb.debian.org/debian bookworm/main amd64 libisal2 amd64 2.30.0-5 [107 kB] Get:1617 http://deb.debian.org/debian bookworm/main amd64 fastp amd64 0.23.2+dfsg-2+b1 [203 kB] Get:1618 http://deb.debian.org/debian bookworm/main amd64 fastq-pair amd64 1.0-3 [7308 B] Get:1619 http://deb.debian.org/debian bookworm/main amd64 libjbzip2-java all 0.9.1-8 [42.7 kB] Get:1620 http://deb.debian.org/debian bookworm/main amd64 libfindbin-libs-perl all 3.0.2-1 [29.7 kB] Get:1621 http://deb.debian.org/debian bookworm/main amd64 libsis-base-jni amd64 18.09~pre1+git20180928.45fbd31+dfsg-3 [12.5 kB] Get:1622 http://deb.debian.org/debian bookworm/main amd64 libsis-base-java all 18.09~pre1+git20180928.45fbd31+dfsg-3 [97.8 kB] Get:1623 http://deb.debian.org/debian bookworm/main amd64 libsis-jhdf5-jni amd64 19.04.1+dfsg-3 [95.9 kB] Get:1624 http://deb.debian.org/debian bookworm/main amd64 libsis-jhdf5-java all 19.04.1+dfsg-3 [1491 kB] Get:1625 http://deb.debian.org/debian bookworm/main amd64 fastqc all 0.11.9+dfsg-6 [390 kB] Get:1626 http://deb.debian.org/debian bookworm/main amd64 r-mathlib amd64 4.2.2.20221110-2 [2291 kB] Get:1627 http://deb.debian.org/debian bookworm/main amd64 fastqtl amd64 2.184+v7+dfsg-3 [234 kB] Get:1628 http://deb.debian.org/debian bookworm/main amd64 fftw2 amd64 2.1.5-6 [249 kB] Get:1629 http://deb.debian.org/debian bookworm/main amd64 fftw-dev amd64 2.1.5-6 [281 kB] Get:1630 http://deb.debian.org/debian bookworm/main amd64 figtree all 1.4.4-5 [872 kB] Get:1631 http://deb.debian.org/debian bookworm/main amd64 filtlong amd64 0.2.1-3 [2937 kB] Get:1632 http://deb.debian.org/debian bookworm/main amd64 fitgcp all 0.0.20150429-5 [3676 kB] Get:1633 http://deb.debian.org/debian bookworm/main amd64 flash amd64 1.2.11-2 [124 kB] Get:1634 http://deb.debian.org/debian bookworm/main amd64 libtbbmalloc2 amd64 2021.8.0-2 [46.3 kB] Get:1635 http://deb.debian.org/debian bookworm/main amd64 libtbbbind-2-5 amd64 2021.8.0-2 [13.5 kB] Get:1636 http://deb.debian.org/debian bookworm/main amd64 libtbb12 amd64 2021.8.0-2 [79.1 kB] Get:1637 http://deb.debian.org/debian bookworm/main amd64 flexbar amd64 1:3.5.0-5 [356 kB] Get:1638 http://deb.debian.org/debian bookworm/main amd64 minimap2 amd64 2.24+dfsg-3+b1 [386 kB] Get:1639 http://deb.debian.org/debian bookworm/main amd64 flye amd64 2.9.1+dfsg-1 [23.2 MB] Get:1640 http://deb.debian.org/debian bookworm/main amd64 fml-asm amd64 0.1+git20190320.b499514-1+b1 [68.5 kB] Get:1641 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-extra all 2.37-6 [1985 kB] Get:1642 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu all 2.37-6 [27.8 kB] Get:1643 http://deb.debian.org/debian bookworm/main amd64 fonts-gfs-baskerville all 1.1-6 [43.7 kB] Get:1644 http://deb.debian.org/debian bookworm/main amd64 fonts-gfs-porson all 1.1-7 [33.8 kB] Get:1645 http://deb.debian.org/debian bookworm/main amd64 fonts-lmodern all 2.005-1 [4540 kB] Get:1646 http://deb.debian.org/debian bookworm/main amd64 fonts-noto-color-emoji all 2.042-0+deb12u1 [9894 kB] Get:1647 http://deb.debian.org/debian bookworm/main amd64 fonts-noto-mono all 20201225-1 [402 kB] Get:1648 http://deb.debian.org/debian bookworm/main amd64 fonts-texgyre-math all 20180621-6 [2095 kB] Get:1649 http://deb.debian.org/debian bookworm/main amd64 libseqlib2 amd64 1.2.0+dfsg-9 [162 kB] Get:1650 http://deb.debian.org/debian bookworm/main amd64 libtabixpp0 amd64 1.1.2-1 [9532 B] Get:1651 http://deb.debian.org/debian bookworm/main amd64 libsmithwaterman0 amd64 0.0+git20160702.2610e25-12+b1 [36.5 kB] Get:1652 http://deb.debian.org/debian bookworm/main amd64 libvcflib1 amd64 1.0.3+dfsg-2 [153 kB] Get:1653 http://deb.debian.org/debian bookworm/main amd64 freebayes amd64 1.3.6-2 [1476 kB] Get:1654 http://deb.debian.org/debian bookworm/main amd64 libfreecontact0v5 amd64 1.0.21-13 [76.1 kB] Get:1655 http://deb.debian.org/debian bookworm/main amd64 libxerces-c3.2 amd64 3.2.4+debian-1 [874 kB] Get:1656 http://deb.debian.org/debian bookworm/main amd64 freecontact amd64 1.0.21-13 [369 kB] Get:1657 http://deb.debian.org/debian bookworm/main amd64 fsa amd64 1.15.9+dfsg-6 [700 kB] Get:1658 http://deb.debian.org/debian bookworm/main amd64 libsdsl3 amd64 2.1.1+dfsg-3 [203 kB] Get:1659 http://deb.debian.org/debian bookworm/main amd64 fsm-lite amd64 1.0-8 [96.0 kB] Get:1660 http://deb.debian.org/debian bookworm/main amd64 libfuse3-3 amd64 3.14.0-4 [88.1 kB] Get:1661 http://deb.debian.org/debian bookworm/main amd64 fuse3 amd64 3.14.0-4 [35.9 kB] Get:1662 http://deb.debian.org/debian bookworm/main amd64 libgtkglext1 amd64 1.2.0-11 [96.2 kB] Get:1663 http://deb.debian.org/debian bookworm/main amd64 gamgi amd64 0.17.5-1 [787 kB] Get:1664 http://deb.debian.org/debian bookworm/main amd64 libncl2 amd64 2.1.21+git20210811.b1213a7-4 [426 kB] Get:1665 http://deb.debian.org/debian bookworm/main amd64 garli amd64 2.1-7 [623 kB] Get:1666 http://deb.debian.org/debian bookworm/main amd64 garlic amd64 1.6-3+b1 [223 kB] Get:1667 http://deb.debian.org/debian bookworm/main amd64 seqan-apps amd64 2.4.0+dfsg-15 [12.4 MB] Get:1668 http://deb.debian.org/debian bookworm/main amd64 gasic all 0.0.r19-8 [20.6 kB] Get:1669 http://deb.debian.org/debian bookworm/main amd64 libdevel-symdump-perl all 2.18-5 [15.8 kB] Get:1670 http://deb.debian.org/debian bookworm/main amd64 libapache2-mod-perl2 amd64 2.0.12-1+b2 [879 kB] Get:1671 http://deb.debian.org/debian bookworm/main amd64 libapache-dbi-perl all 1.12-3 [48.5 kB] Get:1672 http://deb.debian.org/debian bookworm/main amd64 libbio-db-biofetch-perl all 1.7.3-4 [17.5 kB] Get:1673 http://deb.debian.org/debian bookworm/main amd64 libbio-db-gff-perl all 1.7.4-1 [273 kB] Get:1674 http://deb.debian.org/debian bookworm/main amd64 libbio-db-seqfeature-perl all 1.7.4-2 [169 kB] Get:1675 http://deb.debian.org/debian bookworm/main amd64 libbio-graphics-perl all 2.40-6 [610 kB] Get:1676 http://deb.debian.org/debian bookworm/main amd64 libbio-coordinate-perl all 1.7.1-4 [56.7 kB] Get:1677 http://deb.debian.org/debian bookworm/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get:1678 http://deb.debian.org/debian bookworm/main amd64 libexporter-tiny-perl all 1.006000-1 [38.6 kB] Get:1679 http://deb.debian.org/debian bookworm/main amd64 liblist-moreutils-xs-perl amd64 0.430-3+b1 [42.1 kB] Get:1680 http://deb.debian.org/debian bookworm/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:1681 http://deb.debian.org/debian bookworm/main amd64 libstatistics-descriptive-perl all 3.0800-1 [65.6 kB] Get:1682 http://deb.debian.org/debian bookworm/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:1683 http://deb.debian.org/debian bookworm/main amd64 sqlite3 amd64 3.40.1-2 [353 kB] Get:1684 http://deb.debian.org/debian bookworm/main amd64 libjs-prototype all 1.7.3-1 [44.3 kB] Get:1685 http://deb.debian.org/debian bookworm/main amd64 libjs-scriptaculous all 1.9.0-3 [110 kB] Get:1686 http://deb.debian.org/debian bookworm/main amd64 libanyevent-perl amd64 7.170-2+b3 [394 kB] Get:1687 http://deb.debian.org/debian bookworm/main amd64 libanyevent-cachedns-perl all 0.08-3 [7708 B] Get:1688 http://deb.debian.org/debian bookworm/main amd64 libcommon-sense-perl amd64 3.75-3 [23.0 kB] Get:1689 http://deb.debian.org/debian bookworm/main amd64 libanyevent-http-perl all 2.25-2 [35.2 kB] Get:1690 http://deb.debian.org/debian bookworm/main amd64 libstring-approx-perl amd64 3.28-2+b1 [38.9 kB] Get:1691 http://deb.debian.org/debian bookworm/main amd64 libvm-ec2-perl all 1.28-4 [760 kB] Get:1692 http://deb.debian.org/debian bookworm/main amd64 gbrowse all 2.56+dfsg-11 [2375 kB] Get:1693 http://deb.debian.org/debian bookworm/main amd64 gdal-data all 3.6.2+dfsg-1 [518 kB] Get:1694 http://deb.debian.org/debian bookworm/main amd64 gdal-plugins amd64 3.6.2+dfsg-1+b2 [312 kB] Get:1695 http://deb.debian.org/debian bookworm/main amd64 libbabeltrace1 amd64 1.5.11-1+b2 [172 kB] Get:1696 http://deb.debian.org/debian bookworm/main amd64 libdebuginfod1 amd64 0.188-2.1 [27.3 kB] Get:1697 http://deb.debian.org/debian bookworm/main amd64 libipt2 amd64 2.0.5-1 [43.9 kB] Get:1698 http://deb.debian.org/debian bookworm/main amd64 gdb amd64 13.1-3 [3962 kB] Get:1699 http://deb.debian.org/debian bookworm/main amd64 gdpc amd64 2.2.5-15 [42.3 kB] Get:1700 http://deb.debian.org/debian bookworm/main amd64 gemma amd64 0.98.5+dfsg-2 [407 kB] Get:1701 http://deb.debian.org/debian bookworm/main amd64 genometester amd64 4.0+git20200511.91cecb5+dfsg-1 [308 kB] Get:1702 http://deb.debian.org/debian bookworm/main amd64 genomethreader amd64 1.7.3+dfsg-7 [2057 kB] Get:1703 http://deb.debian.org/debian bookworm/main amd64 lua-filesystem amd64 1.8.0-3 [11.8 kB] Get:1704 http://deb.debian.org/debian bookworm/main amd64 lua-lpeg amd64 1.0.2-2 [37.7 kB] Get:1705 http://deb.debian.org/debian bookworm/main amd64 genometools amd64 1.6.2+ds-3 [1627 kB] Get:1706 http://deb.debian.org/debian bookworm/main amd64 libfmt9 amd64 9.1.0+ds1-2 [113 kB] Get:1707 http://deb.debian.org/debian bookworm/main amd64 libmuparserx4.0.11 amd64 4.0.11-2 [192 kB] Get:1708 http://deb.debian.org/debian bookworm/main amd64 libgenomicsdb0 amd64 1.4.4-3 [1527 kB] Get:1709 http://deb.debian.org/debian bookworm/main amd64 genomicsdb-tools amd64 1.4.4-3 [1567 kB] Get:1710 http://deb.debian.org/debian bookworm/main amd64 libtinyxml2.6.2v5 amd64 2.6.2-6+deb12u1 [37.9 kB] Get:1711 http://deb.debian.org/debian bookworm/main amd64 gentle amd64 1.9+cvs20100605+dfsg1-10+b2 [3915 kB] Get:1712 http://deb.debian.org/debian bookworm/main amd64 libavahi-glib1 amd64 0.8-10 [27.4 kB] Get:1713 http://deb.debian.org/debian bookworm/main amd64 libjson-glib-1.0-common all 1.6.6-1 [57.1 kB] Get:1714 http://deb.debian.org/debian bookworm/main amd64 libjson-glib-1.0-0 amd64 1.6.6-1 [65.6 kB] Get:1715 http://deb.debian.org/debian bookworm/main amd64 libmm-glib0 amd64 1.20.4-1 [237 kB] Get:1716 http://deb.debian.org/debian bookworm/main amd64 libproxy1v5 amd64 0.4.18-1.2 [56.2 kB] Get:1717 http://deb.debian.org/debian bookworm/main amd64 glib-networking-common all 2.74.0-4 [80.3 kB] Get:1718 http://deb.debian.org/debian bookworm/main amd64 glib-networking-services amd64 2.74.0-4 [12.0 kB] Get:1719 http://deb.debian.org/debian bookworm/main amd64 glib-networking amd64 2.74.0-4 [68.4 kB] Get:1720 http://deb.debian.org/debian bookworm/main amd64 libsoup-3.0-common all 3.2.2-2 [60.8 kB] Get:1721 http://deb.debian.org/debian bookworm/main amd64 libsoup-3.0-0 amd64 3.2.2-2 [270 kB] Get:1722 http://deb.debian.org/debian bookworm/main amd64 geoclue-2.0 amd64 2.6.0-2 [119 kB] Get:1723 http://deb.debian.org/debian bookworm/main amd64 gff2aplot amd64 2.0-14 [246 kB] Get:1724 http://deb.debian.org/debian bookworm/main amd64 gff2ps all 0.98l-6 [60.4 kB] Get:1725 http://deb.debian.org/debian bookworm/main amd64 gffread amd64 0.12.7-3 [61.3 kB] Get:1726 http://deb.debian.org/debian bookworm/main amd64 libgfortran-12-dev amd64 12.2.0-14 [834 kB] Get:1727 http://deb.debian.org/debian bookworm/main amd64 gfortran-12 amd64 12.2.0-14 [10.2 MB] Get:1728 http://deb.debian.org/debian bookworm/main amd64 gfortran amd64 4:12.2.0-3 [1428 B] Get:1729 http://deb.debian.org/debian bookworm/main amd64 ggd-utils amd64 1.0.0+ds-1+b6 [1818 kB] Get:1730 http://deb.debian.org/debian bookworm/main amd64 libsc-data all 2.3.1-22 [111 kB] Get:1731 http://deb.debian.org/debian bookworm/main amd64 mpi-default-bin amd64 1.14 [4752 B] Get:1732 http://deb.debian.org/debian bookworm/main amd64 libint1 amd64 1.2.1-6 [7512 kB] Get:1733 http://deb.debian.org/debian bookworm/main amd64 libsc7v5 amd64 2.3.1-22 [2327 kB] Get:1734 http://deb.debian.org/debian bookworm/main amd64 mpqc amd64 2.3.1-22 [82.6 kB] Get:1735 http://deb.debian.org/debian bookworm/main amd64 libmopac7-1gf amd64 1.15-6+b3 [470 kB] Get:1736 http://deb.debian.org/debian bookworm/main amd64 libghemical-data all 3.0.0-4.3 [109 kB] Get:1737 http://deb.debian.org/debian bookworm/main amd64 libghemical5v5 amd64 3.0.0-4.3 [376 kB] Get:1738 http://deb.debian.org/debian bookworm/main amd64 libglade2-0 amd64 1:2.6.4-2.4 [81.2 kB] Get:1739 http://deb.debian.org/debian bookworm/main amd64 liboglappth2 amd64 1.0.0-2+b2 [27.9 kB] Get:1740 http://deb.debian.org/debian bookworm/main amd64 libmaeparser1 amd64 1.3.0-1 [88.9 kB] Get:1741 http://deb.debian.org/debian bookworm/main amd64 libopenbabel7 amd64 3.1.1+dfsg-9+b3 [3123 kB] Get:1742 http://deb.debian.org/debian bookworm/main amd64 ghemical amd64 3.0.0-5+b2 [1819 kB] Get:1743 http://deb.debian.org/debian bookworm/main amd64 libghmm1 amd64 0.9~rc3-4 [137 kB] Get:1744 http://deb.debian.org/debian bookworm/main amd64 ghmm amd64 0.9~rc3-4 [142 kB] Get:1745 http://deb.debian.org/debian bookworm/main amd64 git-man all 1:2.39.2-1.1 [2049 kB] Get:1746 http://deb.debian.org/debian bookworm/main amd64 git amd64 1:2.39.2-1.1 [7171 kB] Get:1747 http://deb.debian.org/debian bookworm/main amd64 glam2 amd64 1064-9 [236 kB] Get:1748 http://deb.debian.org/debian bookworm/main amd64 gmap amd64 2021-12-17+ds-3 [11.3 MB] Get:1749 http://deb.debian.org/debian bookworm/main amd64 libobjc-12-dev amd64 12.2.0-14 [170 kB] Get:1750 http://deb.debian.org/debian bookworm/main amd64 gobjc-12 amd64 12.2.0-14 [9484 kB] Get:1751 http://deb.debian.org/debian bookworm/main amd64 gobjc amd64 4:12.2.0-3 [1004 B] Get:1752 http://deb.debian.org/debian bookworm/main amd64 gnustep-make all 2.9.1-2 [216 kB] Get:1753 http://deb.debian.org/debian bookworm/main amd64 libcommons-configuration-java all 1.10-6 [347 kB] Get:1754 http://deb.debian.org/debian bookworm/main amd64 libxpp3-java all 1.1.4c-3 [292 kB] Get:1755 http://deb.debian.org/debian bookworm/main amd64 libxstream-java all 1.4.20-1 [565 kB] Get:1756 http://deb.debian.org/debian bookworm/main amd64 libjsap-java all 2.1-5 [102 kB] Get:1757 http://deb.debian.org/debian bookworm/main amd64 liblogback-java all 1:1.2.11-3 [700 kB] Get:1758 http://deb.debian.org/debian bookworm/main amd64 libdsiutils-java all 2.7.2+dfsg-1 [523 kB] Get:1759 http://deb.debian.org/debian bookworm/main amd64 libcommons-beanutils-java all 1.9.4-1 [232 kB] Get:1760 http://deb.debian.org/debian bookworm/main amd64 libicb-utils-java all 2.0.1+git20161002.afee1d9-5 [81.5 kB] Get:1761 http://deb.debian.org/debian bookworm/main amd64 libprotobuf-java all 3.21.12-3 [1257 kB] Get:1762 http://deb.debian.org/debian bookworm/main amd64 libjavassist-java all 1:3.27.0-1 [731 kB] Get:1763 http://deb.debian.org/debian bookworm/main amd64 libservlet-api-java all 4.0.1-2 [81.0 kB] Get:1764 http://deb.debian.org/debian bookworm/main amd64 libjboss-logging-java all 3.5.0-2 [59.4 kB] Get:1765 http://deb.debian.org/debian bookworm/main amd64 libjboss-vfs-java all 3.2.15.Final-2 [129 kB] Get:1766 http://deb.debian.org/debian bookworm/main amd64 libreflections-java all 0.10.2+dfsg-1 [124 kB] Get:1767 http://deb.debian.org/debian bookworm/main amd64 libpj-java all 0.0~20150107+dfsg-4 [1377 kB] Get:1768 http://deb.debian.org/debian bookworm/main amd64 libgoby-io-java all 3.3.1+dfsg2-9 [988 kB] Get:1769 http://deb.debian.org/debian bookworm/main amd64 libdistlib-java all 1.0-4 [72.1 kB] Get:1770 http://deb.debian.org/debian bookworm/main amd64 r-cran-rjava amd64 1.0-6-1+b1 [917 kB] Get:1771 http://deb.debian.org/debian bookworm/main amd64 goby-java all 3.3.1+dfsg2-9 [1580 kB] Get:1772 http://deb.debian.org/debian bookworm/main amd64 grabix amd64 0.1.7-4 [14.8 kB] Get:1773 http://deb.debian.org/debian bookworm/main amd64 graphlan all 1.1.3-4 [1810 kB] Get:1774 http://deb.debian.org/debian bookworm/main amd64 libpod-parser-perl all 1.65-1 [96.3 kB] Get:1775 http://deb.debian.org/debian bookworm/main amd64 libgetopt-euclid-perl all 0.4.5-4 [45.6 kB] Get:1776 http://deb.debian.org/debian bookworm/main amd64 libmath-random-mt-perl amd64 1.17-2+b1 [13.8 kB] Get:1777 http://deb.debian.org/debian bookworm/main amd64 grinder all 0.5.4-6 [85.3 kB] Get:1778 http://deb.debian.org/debian bookworm/main amd64 gromacs-data all 2022.5-2 [40.9 MB] Get:1779 http://deb.debian.org/debian bookworm/main amd64 libfftw3-single3 amd64 3.3.10-1 [806 kB] Get:1780 http://deb.debian.org/debian bookworm/main amd64 libmuparser2v5 amd64 2.3.3-0.1 [144 kB] Get:1781 http://deb.debian.org/debian bookworm/main amd64 libgromacs7 amd64 2022.5-2 [25.4 MB] Get:1782 http://deb.debian.org/debian bookworm/main amd64 gromacs amd64 2022.5-2 [140 kB] Get:1783 http://deb.debian.org/debian bookworm/main amd64 ivy all 2.5.1-2 [1288 kB] Get:1784 http://deb.debian.org/debian bookworm/main amd64 libbsf-java all 1:2.4.0-8 [76.3 kB] Get:1785 http://deb.debian.org/debian bookworm/main amd64 libjansi-java all 2.4.0-2 [105 kB] Get:1786 http://deb.debian.org/debian bookworm/main amd64 libhawtjni-runtime-java all 1.18-1 [36.3 kB] Get:1787 http://deb.debian.org/debian bookworm/main amd64 libjansi-native-java all 1.8-1 [26.0 kB] Get:1788 http://deb.debian.org/debian bookworm/main amd64 libjansi1-java all 1.18-3 [66.5 kB] Get:1789 http://deb.debian.org/debian bookworm/main amd64 libjline2-java all 2.14.6-5 [151 kB] Get:1790 http://deb.debian.org/debian bookworm/main amd64 libjsp-api-java all 2.3.4-3 [53.7 kB] Get:1791 http://deb.debian.org/debian bookworm/main amd64 libqdox-java all 1.12.1-3 [172 kB] Get:1792 http://deb.debian.org/debian bookworm/main amd64 groovy all 2.4.21-8 [12.9 MB] Get:1793 http://deb.debian.org/debian bookworm/main amd64 gsfonts all 2:20200910-7 [18.5 kB] Get:1794 http://deb.debian.org/debian bookworm/main amd64 gsort amd64 0.1.4-3+b12 [1844 kB] Get:1795 http://deb.debian.org/debian bookworm/main amd64 libgraphene-1.0-0 amd64 1.10.8-1 [43.2 kB] Get:1796 http://deb.debian.org/debian bookworm/main amd64 libgstreamer-gl1.0-0 amd64 1.22.0-3+deb12u1 [246 kB] Get:1797 http://deb.debian.org/debian bookworm/main amd64 gstreamer1.0-gl amd64 1.22.0-3+deb12u1 [178 kB] Get:1798 http://deb.debian.org/debian bookworm/main amd64 libva2 amd64 2.17.0-1 [69.2 kB] Get:1799 http://deb.debian.org/debian bookworm/main amd64 libmfx1 amd64 22.5.4-1 [3219 kB] Get:1800 http://deb.debian.org/debian bookworm/main amd64 libva-drm2 amd64 2.17.0-1 [16.4 kB] Get:1801 http://deb.debian.org/debian bookworm/main amd64 libva-x11-2 amd64 2.17.0-1 [21.0 kB] Get:1802 http://deb.debian.org/debian bookworm/main amd64 libvdpau1 amd64 1.5-2 [26.1 kB] Get:1803 http://deb.debian.org/debian bookworm/main amd64 libavutil57 amd64 7:5.1.4-0+deb12u1 [360 kB] Get:1804 http://deb.debian.org/debian bookworm/main amd64 libcodec2-1.0 amd64 1.0.5-1 [8171 kB] Get:1805 http://deb.debian.org/debian bookworm/main amd64 libgsm1 amd64 1.0.22-1 [30.9 kB] Get:1806 http://deb.debian.org/debian bookworm/main amd64 libhwy1 amd64 1.0.3-3+deb12u1 [348 kB] Get:1807 http://deb.debian.org/debian bookworm/main amd64 libjxl0.7 amd64 0.7.0-10 [1046 kB] Get:1808 http://deb.debian.org/debian bookworm/main amd64 libmp3lame0 amd64 3.100-6 [365 kB] Get:1809 http://deb.debian.org/debian bookworm/main amd64 librsvg2-2 amd64 2.54.7+dfsg-1~deb12u1 [2620 kB] Get:1810 http://deb.debian.org/debian bookworm/main amd64 libshine3 amd64 3.1.1-2 [23.6 kB] Get:1811 http://deb.debian.org/debian bookworm/main amd64 libspeex1 amd64 1.2.1-2 [54.6 kB] Get:1812 http://deb.debian.org/debian bookworm/main amd64 libsoxr0 amd64 0.1.3-4 [77.8 kB] Get:1813 http://deb.debian.org/debian bookworm/main amd64 libswresample4 amd64 7:5.1.4-0+deb12u1 [94.5 kB] Get:1814 http://deb.debian.org/debian bookworm/main amd64 libogg0 amd64 1.3.5-3 [23.4 kB] Get:1815 http://deb.debian.org/debian bookworm/main amd64 libtheora0 amd64 1.1.1+dfsg.1-16.1+b1 [154 kB] Get:1816 http://deb.debian.org/debian bookworm/main amd64 libtwolame0 amd64 0.4.0-2 [51.1 kB] Get:1817 http://deb.debian.org/debian bookworm/main amd64 libvorbis0a amd64 1.3.7-1 [93.0 kB] Get:1818 http://deb.debian.org/debian bookworm/main amd64 libvorbisenc2 amd64 1.3.7-1 [80.6 kB] Get:1819 http://deb.debian.org/debian bookworm/main amd64 libx264-164 amd64 2:0.164.3095+gitbaee400-3 [547 kB] Get:1820 http://deb.debian.org/debian bookworm/main amd64 libxvidcore4 amd64 2:1.3.7-1 [242 kB] Get:1821 http://deb.debian.org/debian bookworm/main amd64 libzvbi-common all 0.2.41-1 [69.7 kB] Get:1822 http://deb.debian.org/debian bookworm/main amd64 libzvbi0 amd64 0.2.41-1 [274 kB] Get:1823 http://deb.debian.org/debian bookworm/main amd64 libavcodec59 amd64 7:5.1.4-0+deb12u1 [5219 kB] Get:1824 http://deb.debian.org/debian bookworm/main amd64 libass9 amd64 1:0.17.1-1 [107 kB] Get:1825 http://deb.debian.org/debian bookworm/main amd64 libudfread0 amd64 1.1.2-1 [16.5 kB] Get:1826 http://deb.debian.org/debian bookworm/main amd64 libbluray2 amd64 1:1.3.4-1 [138 kB] Get:1827 http://deb.debian.org/debian bookworm/main amd64 libchromaprint1 amd64 1.5.1-2+b1 [41.0 kB] Get:1828 http://deb.debian.org/debian bookworm/main amd64 libgme0 amd64 0.6.3-6 [130 kB] Get:1829 http://deb.debian.org/debian bookworm/main amd64 libmpg123-0 amd64 1.31.2-1 [147 kB] Get:1830 http://deb.debian.org/debian bookworm/main amd64 libvorbisfile3 amd64 1.3.7-1 [26.1 kB] Get:1831 http://deb.debian.org/debian bookworm/main amd64 libopenmpt0 amd64 0.6.9-1 [693 kB] Get:1832 http://deb.debian.org/debian bookworm/main amd64 librabbitmq4 amd64 0.11.0-1+b1 [43.5 kB] Get:1833 http://deb.debian.org/debian bookworm/main amd64 libcjson1 amd64 1.7.15-1 [22.9 kB] Get:1834 http://deb.debian.org/debian bookworm/main amd64 librist4 amd64 0.2.7+dfsg-1 [73.9 kB] Get:1835 http://deb.debian.org/debian bookworm/main amd64 libsrt1.5-gnutls amd64 1.5.1-1 [313 kB] Get:1836 http://deb.debian.org/debian bookworm/main amd64 libssh-gcrypt-4 amd64 0.10.6-0+deb12u1 [219 kB] Get:1837 http://deb.debian.org/debian bookworm/main amd64 libnorm1 amd64 1.5.9+dfsg-2 [221 kB] Get:1838 http://deb.debian.org/debian bookworm/main amd64 libpgm-5.3-0 amd64 5.3.128~dfsg-2 [161 kB] Get:1839 http://deb.debian.org/debian bookworm/main amd64 libzmq5 amd64 4.3.4-6 [273 kB] Get:1840 http://deb.debian.org/debian bookworm/main amd64 libavformat59 amd64 7:5.1.4-0+deb12u1 [1098 kB] Get:1841 http://deb.debian.org/debian bookworm/main amd64 libbs2b0 amd64 3.1.0+dfsg-7 [11.5 kB] Get:1842 http://deb.debian.org/debian bookworm/main amd64 libflite1 amd64 2.2-5 [12.8 MB] Get:1843 http://deb.debian.org/debian bookworm/main amd64 libserd-0-0 amd64 0.30.16-1 [47.5 kB] Get:1844 http://deb.debian.org/debian bookworm/main amd64 libsord-0-0 amd64 0.16.14+git221008-1 [20.8 kB] Get:1845 http://deb.debian.org/debian bookworm/main amd64 libsratom-0-0 amd64 0.6.14-1 [17.7 kB] Get:1846 http://deb.debian.org/debian bookworm/main amd64 liblilv-0-0 amd64 0.24.14-1 [49.4 kB] Get:1847 http://deb.debian.org/debian bookworm/main amd64 libmysofa1 amd64 1.3.1~dfsg0-1 [1158 kB] Get:1848 http://deb.debian.org/debian bookworm/main amd64 libvulkan1 amd64 1.3.239.0-1 [116 kB] Get:1849 http://deb.debian.org/debian bookworm/main amd64 libplacebo208 amd64 4.208.0-3 [2239 kB] Get:1850 http://deb.debian.org/debian bookworm/main amd64 libasyncns0 amd64 0.8-6+b3 [12.9 kB] Get:1851 http://deb.debian.org/debian bookworm/main amd64 libflac12 amd64 1.4.2+ds-2 [198 kB] Get:1852 http://deb.debian.org/debian bookworm/main amd64 libsndfile1 amd64 1.2.0-1 [196 kB] Get:1853 http://deb.debian.org/debian bookworm/main amd64 libpulse0 amd64 16.1+dfsg1-2+b1 [274 kB] Get:1854 http://deb.debian.org/debian bookworm/main amd64 libsphinxbase3 amd64 0.8+5prealpha+1-16 [118 kB] Get:1855 http://deb.debian.org/debian bookworm/main amd64 libpocketsphinx3 amd64 0.8+5prealpha+1-15 [125 kB] Get:1856 http://deb.debian.org/debian bookworm/main amd64 libpostproc56 amd64 7:5.1.4-0+deb12u1 [91.1 kB] Get:1857 http://deb.debian.org/debian bookworm/main amd64 librubberband2 amd64 3.1.2+dfsg0-1 [137 kB] Get:1858 http://deb.debian.org/debian bookworm/main amd64 libswscale6 amd64 7:5.1.4-0+deb12u1 [212 kB] Get:1859 http://deb.debian.org/debian bookworm/main amd64 libvidstab1.1 amd64 1.1.0-2+b1 [37.8 kB] Get:1860 http://deb.debian.org/debian bookworm/main amd64 libzimg2 amd64 3.0.4+ds1-1 [227 kB] Get:1861 http://deb.debian.org/debian bookworm/main amd64 libavfilter8 amd64 7:5.1.4-0+deb12u1 [3699 kB] Get:1862 http://deb.debian.org/debian bookworm/main amd64 gstreamer1.0-libav amd64 1.22.0-2 [104 kB] Get:1863 http://deb.debian.org/debian bookworm/main amd64 libraw1394-11 amd64 2.1.2-2 [41.1 kB] Get:1864 http://deb.debian.org/debian bookworm/main amd64 libusb-1.0-0 amd64 2:1.0.26-1 [62.6 kB] Get:1865 http://deb.debian.org/debian bookworm/main amd64 libdc1394-25 amd64 2.2.6-4 [109 kB] Get:1866 http://deb.debian.org/debian bookworm/main amd64 libdca0 amd64 0.0.7-2 [89.8 kB] Get:1867 http://deb.debian.org/debian bookworm/main amd64 libgles2 amd64 1.6.0-1 [16.8 kB] Get:1868 http://deb.debian.org/debian bookworm/main amd64 libdirectfb-1.7-7 amd64 1.7.7-11 [1046 kB] Get:1869 http://deb.debian.org/debian bookworm/main amd64 libdvdread8 amd64 6.1.3-1 [91.9 kB] Get:1870 http://deb.debian.org/debian bookworm/main amd64 libdvdnav4 amd64 6.1.1-1 [47.5 kB] Get:1871 http://deb.debian.org/debian bookworm/main amd64 libfaad2 amd64 2.10.1-1 [160 kB] Get:1872 http://deb.debian.org/debian bookworm/main amd64 libinstpatch-1.0-2 amd64 1.1.6-1 [259 kB] Get:1873 http://deb.debian.org/debian bookworm/main amd64 libsamplerate0 amd64 0.2.2-3 [952 kB] Get:1874 http://deb.debian.org/debian bookworm/main amd64 libjack-jackd2-0 amd64 1.9.21~dfsg-3 [281 kB] Get:1875 http://deb.debian.org/debian bookworm/main amd64 libdecor-0-0 amd64 0.1.1-2 [14.6 kB] Get:1876 http://deb.debian.org/debian bookworm/main amd64 libsdl2-2.0-0 amd64 2.26.5+dfsg-1 [629 kB] Get:1877 http://deb.debian.org/debian bookworm/main amd64 timgm6mb-soundfont all 1.3-5 [5427 kB] Get:1878 http://deb.debian.org/debian bookworm/main amd64 libfluidsynth3 amd64 2.3.1-2 [241 kB] Get:1879 http://deb.debian.org/debian bookworm/main amd64 libfreeaptx0 amd64 0.1.1-2 [11.7 kB] Get:1880 http://deb.debian.org/debian bookworm/main amd64 libgssdp-1.6-0 amd64 1.6.2-2 [38.8 kB] Get:1881 http://deb.debian.org/debian bookworm/main amd64 libgupnp-1.6-0 amd64 1.6.3-1 [87.1 kB] Get:1882 http://deb.debian.org/debian bookworm/main amd64 libgupnp-igd-1.0-4 amd64 1.2.0-3 [14.6 kB] Get:1883 http://deb.debian.org/debian bookworm/main amd64 libnice10 amd64 0.1.21-1 [154 kB] Get:1884 http://deb.debian.org/debian bookworm/main amd64 libgstreamer-plugins-bad1.0-0 amd64 1.22.0-4+deb12u5 [766 kB] Get:1885 http://deb.debian.org/debian bookworm/main amd64 libimath-3-1-29 amd64 3.1.6-1 [47.4 kB] Get:1886 http://deb.debian.org/debian bookworm/main amd64 libkate1 amd64 0.4.1-11 [44.3 kB] Get:1887 http://deb.debian.org/debian bookworm/main amd64 libldacbt-enc2 amd64 2.0.2.3+git20200429+ed310a0-4 [24.6 kB] Get:1888 http://deb.debian.org/debian bookworm/main amd64 libyajl2 amd64 2.1.0-3+deb12u2 [23.0 kB] Get:1889 http://deb.debian.org/debian bookworm/main amd64 libraptor2-0 amd64 2.0.15-4 [163 kB] Get:1890 http://deb.debian.org/debian bookworm/main amd64 liblrdf0 amd64 0.6.1-4 [21.8 kB] Get:1891 http://deb.debian.org/debian bookworm/main amd64 libltc11 amd64 1.3.2-1 [14.1 kB] Get:1892 http://deb.debian.org/debian bookworm/main amd64 libmjpegutils-2.1-0 amd64 1:2.1.0+debian-7 [27.8 kB] Get:1893 http://deb.debian.org/debian bookworm/main amd64 libmodplug1 amd64 1:0.8.9.0-3 [164 kB] Get:1894 http://deb.debian.org/debian bookworm/main amd64 libmpcdec6 amd64 2:0.1~r495-2 [32.9 kB] Get:1895 http://deb.debian.org/debian bookworm/main amd64 libmpeg2encpp-2.1-0 amd64 1:2.1.0+debian-7 [76.6 kB] Get:1896 http://deb.debian.org/debian bookworm/main amd64 libmplex2-2.1-0 amd64 1:2.1.0+debian-7 [50.7 kB] Get:1897 http://deb.debian.org/debian bookworm/main amd64 libneon27 amd64 0.32.5-1 [97.2 kB] Get:1898 http://deb.debian.org/debian bookworm/main amd64 libopenal-data all 1:1.19.1-2 [170 kB] Get:1899 http://deb.debian.org/debian bookworm/main amd64 libsndio7.0 amd64 1.9.0-0.3+b2 [27.3 kB] Get:1900 http://deb.debian.org/debian bookworm/main amd64 libopenal1 amd64 1:1.19.1-2 [501 kB] Get:1901 http://deb.debian.org/debian bookworm/main amd64 libopenexr-3-1-30 amd64 3.1.5-5 [923 kB] Get:1902 http://deb.debian.org/debian bookworm/main amd64 libopenh264-7 amd64 2.3.1+dfsg-3 [393 kB] Get:1903 http://deb.debian.org/debian bookworm/main amd64 libopenni2-0 amd64 2.2.0.33+dfsg-15+b1 [388 kB] Get:1904 http://deb.debian.org/debian bookworm/main amd64 libqrencode4 amd64 4.1.1-1 [40.4 kB] Get:1905 http://deb.debian.org/debian bookworm/main amd64 libsbc1 amd64 2.0-1 [32.0 kB] Get:1906 http://deb.debian.org/debian bookworm/main amd64 libsoundtouch1 amd64 2.3.2+ds1-1 [51.8 kB] Get:1907 http://deb.debian.org/debian bookworm/main amd64 libspandsp2 amd64 0.0.6+dfsg-2+b1 [282 kB] Get:1908 http://deb.debian.org/debian bookworm/main amd64 libsrtp2-1 amd64 2.5.0-3 [43.9 kB] Get:1909 http://deb.debian.org/debian bookworm/main amd64 libvo-aacenc0 amd64 0.1.3-2 [69.2 kB] Get:1910 http://deb.debian.org/debian bookworm/main amd64 libvo-amrwbenc0 amd64 0.1.3-2 [68.4 kB] Get:1911 http://deb.debian.org/debian bookworm/main amd64 libwebrtc-audio-processing1 amd64 0.3-1+b1 [264 kB] Get:1912 http://deb.debian.org/debian bookworm/main amd64 libwildmidi2 amd64 0.4.3-1 [65.3 kB] Get:1913 http://deb.debian.org/debian bookworm/main amd64 libv4lconvert0 amd64 1.22.1-5+b2 [143 kB] Get:1914 http://deb.debian.org/debian bookworm/main amd64 libv4l-0 amd64 1.22.1-5+b2 [109 kB] Get:1915 http://deb.debian.org/debian bookworm/main amd64 libzbar0 amd64 0.23.92-7+deb12u1 [130 kB] Get:1916 http://deb.debian.org/debian bookworm/main amd64 libzxing2 amd64 1.4.0-3+b1 [601 kB] Get:1917 http://deb.debian.org/debian bookworm/main amd64 libcdparanoia0 amd64 3.10.2+debian-14 [48.8 kB] Get:1918 http://deb.debian.org/debian bookworm/main amd64 libvisual-0.4-0 amd64 0.4.0-19 [132 kB] Get:1919 http://deb.debian.org/debian bookworm/main amd64 gstreamer1.0-plugins-base amd64 1.22.0-3+deb12u1 [740 kB] Get:1920 http://deb.debian.org/debian bookworm/main amd64 libslang2 amd64 2.3.3-3 [554 kB] Get:1921 http://deb.debian.org/debian bookworm/main amd64 libaa1 amd64 1.4p5-50 [55.7 kB] Get:1922 http://deb.debian.org/debian bookworm/main amd64 libavc1394-0 amd64 0.5.4-5 [19.9 kB] Get:1923 http://deb.debian.org/debian bookworm/main amd64 libcaca0 amd64 0.99.beta20-3 [205 kB] Get:1924 http://deb.debian.org/debian bookworm/main amd64 libdv4 amd64 1.0.0-15 [74.4 kB] Get:1925 http://deb.debian.org/debian bookworm/main amd64 libiec61883-0 amd64 1.2.0-6+b1 [30.5 kB] Get:1926 http://deb.debian.org/debian bookworm/main amd64 libshout3 amd64 2.4.6-1+b1 [56.4 kB] Get:1927 http://deb.debian.org/debian bookworm/main amd64 libtag1v5-vanilla amd64 1.13-2 [298 kB] Get:1928 http://deb.debian.org/debian bookworm/main amd64 libtag1v5 amd64 1.13-2 [18.7 kB] Get:1929 http://deb.debian.org/debian bookworm/main amd64 libwavpack1 amd64 5.6.0-1 [85.7 kB] Get:1930 http://deb.debian.org/debian bookworm/main amd64 gstreamer1.0-plugins-good amd64 1.22.0-5+deb12u1 [2220 kB] Get:1931 http://deb.debian.org/debian bookworm/main amd64 gstreamer1.0-plugins-bad amd64 1.22.0-4+deb12u5 [2993 kB] Get:1932 http://deb.debian.org/debian bookworm/main amd64 libxv1 amd64 2:1.0.11-1.1 [24.8 kB] Get:1933 http://deb.debian.org/debian bookworm/main amd64 gstreamer1.0-x amd64 1.22.0-3+deb12u1 [140 kB] Get:1934 http://deb.debian.org/debian bookworm/main amd64 gubbins amd64 2.4.1-5 [58.3 kB] Get:1935 http://deb.debian.org/debian bookworm/main amd64 gwama amd64 2.2.2+dfsg-5 [84.1 kB] Get:1936 http://deb.debian.org/debian bookworm/main amd64 harvest-tools amd64 1.3-8+b2 [140 kB] Get:1937 http://deb.debian.org/debian bookworm/main amd64 hdf5-helpers amd64 1.10.8+repack1-1 [27.9 kB] Get:1938 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.8+repack1-1 [67.8 kB] Get:1939 http://deb.debian.org/debian bookworm/main amd64 hdf5-tools amd64 1.10.8+repack1-1 [481 kB] Get:1940 http://deb.debian.org/debian bookworm/main amd64 hhsuite-data all 3.3.0+ds-7 [4401 kB] Get:1941 http://deb.debian.org/debian bookworm/main amd64 hhsuite amd64 3.3.0+ds-7+b2 [55.0 MB] Get:1942 http://deb.debian.org/debian bookworm/main amd64 hilive amd64 2.0a-3+b2 [541 kB] Get:1943 http://deb.debian.org/debian bookworm/main amd64 python3-ujson amd64 5.7.0-1 [24.2 kB] Get:1944 http://deb.debian.org/debian bookworm/main amd64 python3-colorlog all 6.7.0-1 [26.5 kB] Get:1945 http://deb.debian.org/debian bookworm/main amd64 python3-easydev all 0.12.0+dfsg-4 [35.0 kB] Get:1946 http://deb.debian.org/debian bookworm/main amd64 python3-colormap all 1.0.4-3 [15.4 kB] Get:1947 http://deb.debian.org/debian bookworm/main amd64 python3-pbcore all 2.1.2+dfsg-5 [2830 kB] Get:1948 http://deb.debian.org/debian bookworm/main amd64 hinge amd64 0.5.0-7+b1 [506 kB] Get:1949 http://deb.debian.org/debian bookworm/main amd64 hmmer2 amd64 2.3.2+dfsg-8 [315 kB] Get:1950 http://deb.debian.org/debian bookworm/main amd64 i965-va-driver amd64 2.4.1+dfsg1-1 [309 kB] Get:1951 http://deb.debian.org/debian bookworm/main amd64 icc-profiles-free all 2.0.1+dfsg-1.1 [214 kB] Get:1952 http://deb.debian.org/debian bookworm/main amd64 icu-devtools amd64 72.1-3 [206 kB] Get:1953 http://deb.debian.org/debian bookworm/main amd64 idba amd64 1.1.3-8 [643 kB] Get:1954 http://deb.debian.org/debian bookworm/main amd64 igblast amd64 1.19.0-1+b1 [38.2 MB] Get:1955 http://deb.debian.org/debian bookworm/main amd64 libjemalloc2 amd64 5.3.0-1 [275 kB] Get:1956 http://deb.debian.org/debian bookworm/main amd64 igor amd64 1.4.0+dfsg-4 [566 kB] Get:1957 http://deb.debian.org/debian bookworm/main amd64 libjide-oss-java all 3.7.6+dfsg-2 [1490 kB] Get:1958 http://deb.debian.org/debian bookworm/main amd64 libnb-absolutelayout-java all 12.1-3 [12.5 kB] Get:1959 http://deb.debian.org/debian bookworm/main amd64 igv all 2.16.0+dfsg-1 [3278 kB] Get:1960 http://deb.debian.org/debian bookworm/main amd64 iio-sensor-proxy amd64 3.0-2 [39.6 kB] Get:1961 http://deb.debian.org/debian bookworm/main amd64 indelible amd64 1.03-5 [419 kB] Get:1962 http://deb.debian.org/debian bookworm/main amd64 infernal amd64 1.1.4-1 [5523 kB] Get:1963 http://deb.debian.org/debian bookworm/main amd64 info amd64 6.8-6+b1 [319 kB] Get:1964 http://deb.debian.org/debian bookworm/main amd64 python3-future all 0.18.2-6 [348 kB] Get:1965 http://deb.debian.org/debian bookworm/main amd64 insilicoseq all 1.5.4-6 [1470 kB] Get:1966 http://deb.debian.org/debian bookworm/main amd64 libigdgmm12 amd64 22.3.3+ds1-1 [139 kB] Get:1967 http://deb.debian.org/debian bookworm/main amd64 intel-media-va-driver amd64 23.1.1+dfsg1-1 [2882 kB] Get:1968 http://deb.debian.org/debian bookworm/main amd64 ipig amd64 0.0.r5-4 [165 kB] Get:1969 http://deb.debian.org/debian bookworm/main amd64 iqtree amd64 2.0.7+dfsg-1 [3458 kB] Get:1970 http://deb.debian.org/debian bookworm/main amd64 isympy-common all 1.11.1-1 [233 kB] Get:1971 http://deb.debian.org/debian bookworm/main amd64 isympy3 all 1.11.1-1 [5524 B] Get:1972 http://deb.debian.org/debian bookworm/main amd64 kmc amd64 3.2.1+dfsg-1+b2 [997 kB] Get:1973 http://deb.debian.org/debian bookworm/main amd64 iva amd64 1.0.11+ds-3 [8581 kB] Get:1974 http://deb.debian.org/debian bookworm/main amd64 libcommons-discovery-java all 0.5-4 [71.3 kB] Get:1975 http://deb.debian.org/debian bookworm/main amd64 libgmbal-commons-java all 3.2.1-b003-1.1 [46.5 kB] Get:1976 http://deb.debian.org/debian bookworm/main amd64 libgmbal-pfl-java all 4.0.1-b003-2 [1029 kB] Get:1977 http://deb.debian.org/debian bookworm/main amd64 libgmbal-java all 4.0.0-b002-1.1 [188 kB] Get:1978 http://deb.debian.org/debian bookworm/main amd64 libsaaj-java all 1.4.0-3 [37.8 kB] Get:1979 http://deb.debian.org/debian bookworm/main amd64 libjaxws-api-java all 2.3.0-1.1 [49.9 kB] Get:1980 http://deb.debian.org/debian bookworm/main amd64 libjws-api-java all 1.1-2 [21.2 kB] Get:1981 http://deb.debian.org/debian bookworm/main amd64 libknopflerfish-osgi-framework-java all 6.1.1-3.1 [642 kB] Get:1982 http://deb.debian.org/debian bookworm/main amd64 libisorelax-java all 20041111-14 [63.4 kB] Get:1983 http://deb.debian.org/debian bookworm/main amd64 libmsv-java all 2009.1+dfsg1-6 [760 kB] Get:1984 http://deb.debian.org/debian bookworm/main amd64 libstax2-api-java all 4.1-1 [152 kB] Get:1985 http://deb.debian.org/debian bookworm/main amd64 libwoodstox-java all 1:6.2.1-1 [1124 kB] Get:1986 http://deb.debian.org/debian bookworm/main amd64 libmetro-policy-java all 2.7.2-3 [169 kB] Get:1987 http://deb.debian.org/debian bookworm/main amd64 libmimepull-java all 1.9.7-2 [67.1 kB] Get:1988 http://deb.debian.org/debian bookworm/main amd64 libsaaj-ri-java all 1.4.1-1.1 [461 kB] Get:1989 http://deb.debian.org/debian bookworm/main amd64 libjaxws-java all 2.3.0.2-2 [3061 kB] Get:1990 http://deb.debian.org/debian bookworm/main amd64 javahelp2 all 2.0.05.ds1-10 [907 kB] Get:1991 http://deb.debian.org/debian bookworm/main amd64 libandroid-json-org-java all 20121204-20090211-5 [35.8 kB] Get:1992 http://deb.debian.org/debian bookworm/main amd64 libapache-mime4j-java all 0.8.2-1 [415 kB] Get:1993 http://deb.debian.org/debian bookworm/main amd64 libcommons-httpclient-java all 3.1-16 [291 kB] Get:1994 http://deb.debian.org/debian bookworm/main amd64 libmail-java all 1.6.5-2 [701 kB] Get:1995 http://deb.debian.org/debian bookworm/main amd64 libwsdl4j-java all 1.6.3-4.1 [184 kB] Get:1996 http://deb.debian.org/debian bookworm/main amd64 libaxis-java all 1.4-28+deb12u1 [1510 kB] Get:1997 http://deb.debian.org/debian bookworm/main amd64 libhttpmime-java all 4.5.14-1 [40.9 kB] Get:1998 http://deb.debian.org/debian bookworm/main amd64 libintervalstorej-java all 1.2+dfsg-5 [26.0 kB] Get:1999 http://deb.debian.org/debian bookworm/main amd64 libjaba-client-java all 2.2.0-2 [400 kB] Get:2000 http://deb.debian.org/debian bookworm/main amd64 libjaxrs-api-java all 2.1.2-2 [115 kB] Get:2001 http://deb.debian.org/debian bookworm/main amd64 libjsr311-api-java all 1.1.1-1.1 [46.4 kB] Get:2002 http://deb.debian.org/debian bookworm/main amd64 libjersey1-core-java all 1.19.3-8 [392 kB] Get:2003 http://deb.debian.org/debian bookworm/main amd64 libjersey1-client-java all 1.19.3-8 [128 kB] Get:2004 http://deb.debian.org/debian bookworm/main amd64 libel-api-java all 3.0.0-3 [64.9 kB] Get:2005 http://deb.debian.org/debian bookworm/main amd64 libwebsocket-api-java all 1.1-2 [40.1 kB] Get:2006 http://deb.debian.org/debian bookworm/main amd64 libjetty9-java all 9.4.50-4+deb12u2 [2981 kB] Get:2007 http://deb.debian.org/debian bookworm/main amd64 libjfreesvg-java all 4.1-2 [44.1 kB] Get:2008 http://deb.debian.org/debian bookworm/main amd64 libjswingreader-java all 0.3-3 [80.3 kB] Get:2009 http://deb.debian.org/debian bookworm/main amd64 libmiglayout-java all 5.1-3 [133 kB] Get:2010 http://deb.debian.org/debian bookworm/main amd64 libcastor-core-java all 1.3.2-7 [54.0 kB] Get:2011 http://deb.debian.org/debian bookworm/main amd64 libcastor-xml-java all 1.3.2-7 [736 kB] Get:2012 http://deb.debian.org/debian bookworm/main amd64 libvamsas-client-java all 0.2+dfsg-2 [584 kB] Get:2013 http://deb.debian.org/debian bookworm/main amd64 varna all 3-93+ds-4 [790 kB] Get:2014 http://deb.debian.org/debian bookworm/main amd64 jalview all 2.11.2.5+dfsg-3 [7771 kB] Get:2015 http://deb.debian.org/debian bookworm/main amd64 junit all 3.8.2-9 [110 kB] Get:2016 http://deb.debian.org/debian bookworm/main amd64 javacc all 7.0.12-1 [624 kB] Get:2017 http://deb.debian.org/debian bookworm/main amd64 jellyfish1 amd64 1.1.11-8 [142 kB] Get:2018 http://deb.debian.org/debian bookworm/main amd64 libpal-java all 1.5.1+dfsg-8 [690 kB] Get:2019 http://deb.debian.org/debian bookworm/main amd64 phyml amd64 3:3.3.20220408-3 [1103 kB] Get:2020 http://deb.debian.org/debian bookworm/main amd64 jmodeltest all 2.1.10+dfsg-12 [991 kB] Get:2021 http://deb.debian.org/debian bookworm/main amd64 jmol all 14.32.83+dfsg-2 [300 kB] Get:2022 http://deb.debian.org/debian bookworm/main amd64 jtb all 1.4.12-3 [1330 kB] Get:2023 http://deb.debian.org/debian bookworm/main amd64 libapiguardian-java all 1.1.2-1 [4656 B] Get:2024 http://deb.debian.org/debian bookworm/main amd64 libopentest4j-java all 1.2.0-4 [9516 B] Get:2025 http://deb.debian.org/debian bookworm/main amd64 libopentest4j-reporting-java all 0.1.0-M1-2 [49.0 kB] Get:2026 http://deb.debian.org/debian bookworm/main amd64 libpicocli-java all 4.6.2-2 [390 kB] Get:2027 http://deb.debian.org/debian bookworm/main amd64 libunivocity-parsers-java all 2.9.1-1 [397 kB] Get:2028 http://deb.debian.org/debian bookworm/main amd64 junit5 all 5.9.2-1 [2398 kB] Get:2029 http://deb.debian.org/debian bookworm/main amd64 python3-jupyter-core all 4.12.0-1 [27.3 kB] Get:2030 http://deb.debian.org/debian bookworm/main amd64 jupyter-core all 4.12.0-1 [9424 B] Get:2031 http://deb.debian.org/debian bookworm/main amd64 jupyter-nbextension-jupyter-js-widgets all 6.0.0-11 [477 kB] Get:2032 http://deb.debian.org/debian bookworm/main amd64 libjs-backbone all 1.4.1~dfsg+~1.4.15-3 [186 kB] Get:2033 http://deb.debian.org/debian bookworm/main amd64 libjs-bootstrap-tour all 0.12.0+dfsg-5 [20.9 kB] Get:2034 http://deb.debian.org/debian bookworm/main amd64 libjs-codemirror all 5.65.0+~cs5.83.9-2 [774 kB] Get:2035 http://deb.debian.org/debian bookworm/main amd64 libjs-es6-promise all 4.2.8-12 [15.9 kB] Get:2036 http://deb.debian.org/debian bookworm/main amd64 node-jed all 1.1.1-4 [14.7 kB] Get:2037 http://deb.debian.org/debian bookworm/main amd64 libjs-jed all 1.1.1-4 [3772 B] Get:2038 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-typeahead all 2.11.0+dfsg1-3 [47.7 kB] Get:2039 http://deb.debian.org/debian bookworm/main amd64 libjs-marked all 4.2.3+ds+~4.0.7-2 [34.5 kB] Get:2040 http://deb.debian.org/debian bookworm/main amd64 libjs-moment all 2.29.4+ds-1 [155 kB] Get:2041 http://deb.debian.org/debian bookworm/main amd64 libjs-requirejs all 2.3.6+ds+~2.1.34-2 [196 kB] Get:2042 http://deb.debian.org/debian bookworm/main amd64 libjs-requirejs-text all 2.0.12-1.1 [9016 B] Get:2043 http://deb.debian.org/debian bookworm/main amd64 libjs-text-encoding all 0.7.0-5 [104 kB] Get:2044 http://deb.debian.org/debian bookworm/main amd64 libjs-xterm all 3.8.1+~cs0.9.0-1 [8728 B] Get:2045 http://deb.debian.org/debian bookworm/main amd64 python3-tornado amd64 6.2.0-3 [337 kB] Get:2046 http://deb.debian.org/debian bookworm/main amd64 python3-terminado all 0.17.0-1 [19.2 kB] Get:2047 http://deb.debian.org/debian bookworm/main amd64 python3-argon2 amd64 21.1.0-2 [22.8 kB] Get:2048 http://deb.debian.org/debian bookworm/main amd64 python3-bytecode all 0.14.0-2 [39.9 kB] Get:2049 http://deb.debian.org/debian bookworm/main amd64 python3-coverage amd64 6.5.0+dfsg1-2+b1 [153 kB] Get:2050 http://deb.debian.org/debian bookworm/main amd64 python3-pydevd amd64 2.9.5+ds-4 [476 kB] Get:2051 http://deb.debian.org/debian bookworm/main amd64 python3-debugpy all 1.6.6+ds-1 [67.7 kB] Get:2052 http://deb.debian.org/debian bookworm/main amd64 python3-entrypoints all 0.4-2 [7184 B] Get:2053 http://deb.debian.org/debian bookworm/main amd64 python3-nest-asyncio all 1.5.4-1 [6248 B] Get:2054 http://deb.debian.org/debian bookworm/main amd64 python3-py all 1.11.0-1 [89.2 kB] Get:2055 http://deb.debian.org/debian bookworm/main amd64 python3-zmq amd64 24.0.1-4+b1 [263 kB] Get:2056 http://deb.debian.org/debian bookworm/main amd64 python3-jupyter-client all 7.4.9-2 [103 kB] Get:2057 http://deb.debian.org/debian bookworm/main amd64 python3-ipykernel all 6.17.0-1 [109 kB] Get:2058 http://deb.debian.org/debian bookworm/main amd64 python3-ipython-genutils all 0.2.0-5 [21.4 kB] Get:2059 http://deb.debian.org/debian bookworm/main amd64 python3-markupsafe amd64 2.1.2-1+b1 [13.2 kB] Get:2060 http://deb.debian.org/debian bookworm/main amd64 python3-jinja2 all 3.1.2-1 [119 kB] Get:2061 http://deb.debian.org/debian bookworm/main amd64 python3-webencodings all 0.5.1-5 [11.1 kB] Get:2062 http://deb.debian.org/debian bookworm/main amd64 python3-html5lib all 1.1-3 [93.0 kB] Get:2063 http://deb.debian.org/debian bookworm/main amd64 python3-bleach all 5.0.1-2 [48.5 kB] Get:2064 http://deb.debian.org/debian bookworm/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB] Get:2065 http://deb.debian.org/debian bookworm/main amd64 python3-jupyterlab-pygments all 0.2.2-3 [6096 B] Get:2066 http://deb.debian.org/debian bookworm/main amd64 python3-fastjsonschema all 2.16.3-2 [21.6 kB] Get:2067 http://deb.debian.org/debian bookworm/main amd64 python3-nbformat all 5.5.0-1 [43.2 kB] Get:2068 http://deb.debian.org/debian bookworm/main amd64 python3-nbclient all 0.7.2-1 [62.1 kB] Get:2069 http://deb.debian.org/debian bookworm/main amd64 python3-pandocfilters all 1.5.0-1 [23.7 kB] Get:2070 http://deb.debian.org/debian bookworm/main amd64 python-tinycss2-common all 1.2.1-2 [31.5 kB] Get:2071 http://deb.debian.org/debian bookworm/main amd64 python3-tinycss2 all 1.2.1-2 [21.9 kB] Get:2072 http://deb.debian.org/debian bookworm/main amd64 python3-nbconvert all 6.5.3-3 [163 kB] Get:2073 http://deb.debian.org/debian bookworm/main amd64 python3-prometheus-client all 0.16.0-0.1 [45.2 kB] Get:2074 http://deb.debian.org/debian bookworm/main amd64 python3-send2trash all 1.8.1~b0-2 [16.3 kB] Get:2075 http://deb.debian.org/debian bookworm/main amd64 python3-notebook all 6.4.12-2.2 [1406 kB] Get:2076 http://deb.debian.org/debian bookworm/main amd64 jupyter-notebook all 6.4.12-2.2 [37.8 kB] Get:2077 http://deb.debian.org/debian bookworm/main amd64 kalign amd64 1:3.3.5-1 [132 kB] Get:2078 http://deb.debian.org/debian bookworm/main amd64 kallisto amd64 0.48.0+dfsg-3 [275 kB] Get:2079 http://deb.debian.org/debian bookworm/main amd64 kaptive all 2.0.4-1 [23.9 kB] Get:2080 http://deb.debian.org/debian bookworm/main amd64 kaptive-data all 2.0.4-1 [2673 kB] Get:2081 http://deb.debian.org/debian bookworm/main amd64 sphinx-common all 5.3.0-4 [653 kB] Get:2082 http://deb.debian.org/debian bookworm/main amd64 python3-alabaster all 0.7.12-1 [20.8 kB] Get:2083 http://deb.debian.org/debian bookworm/main amd64 python-babel-localedata all 2.10.3-1 [5615 kB] Get:2084 http://deb.debian.org/debian bookworm/main amd64 python3-babel all 2.10.3-1 [103 kB] Get:2085 http://deb.debian.org/debian bookworm/main amd64 python3-roman all 3.3-3 [9880 B] Get:2086 http://deb.debian.org/debian bookworm/main amd64 python3-docutils all 0.19+dfsg-6 [382 kB] Get:2087 http://deb.debian.org/debian bookworm/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get:2088 http://deb.debian.org/debian bookworm/main amd64 python3-snowballstemmer all 2.2.0-2 [57.8 kB] Get:2089 http://deb.debian.org/debian bookworm/main amd64 python3-sphinx all 5.3.0-4 [549 kB] Get:2090 http://deb.debian.org/debian bookworm/main amd64 python3-guzzle-sphinx-theme all 0.7.11-6 [1346 kB] Get:2091 http://deb.debian.org/debian bookworm/main amd64 khmer-common all 3.0.0~a3+dfsg-4 [230 kB] Get:2092 http://deb.debian.org/debian bookworm/main amd64 python3-screed all 1.0.5-4 [109 kB] Get:2093 http://deb.debian.org/debian bookworm/main amd64 khmer amd64 3.0.0~a3+dfsg-4+b2 [7079 kB] Get:2094 http://deb.debian.org/debian bookworm/main amd64 python3-iso8601 all 1.0.2-1 [15.7 kB] Get:2095 http://deb.debian.org/debian bookworm/main amd64 python3-avro all 1.11.1+dfsg-2 [70.5 kB] Get:2096 http://deb.debian.org/debian bookworm/main amd64 python3-pbcommand all 2.1.1+git20220616.3f2e6c2-2 [90.7 kB] Get:2097 http://deb.debian.org/debian bookworm/main amd64 libbigwig0 amd64 0.4.7+dfsg-3 [27.9 kB] Get:2098 http://deb.debian.org/debian bookworm/main amd64 python3-pybigwig amd64 0.3.18+dfsg-1+b3 [34.8 kB] Get:2099 http://deb.debian.org/debian bookworm/main amd64 kineticstools-data all 0.6.1+git20220223.1326a4d+dfsg-2 [21.7 MB] Get:2100 http://deb.debian.org/debian bookworm/main amd64 python3-kineticstools amd64 0.6.1+git20220223.1326a4d+dfsg-2+b1 [46.7 kB] Get:2101 http://deb.debian.org/debian bookworm/main amd64 kineticstools all 0.6.1+git20220223.1326a4d+dfsg-2 [14.6 kB] Get:2102 http://deb.debian.org/debian bookworm/main amd64 king-probe amd64 02.21-1 [143 kB] Get:2103 http://deb.debian.org/debian bookworm/main amd64 kissplice amd64 2.6.2-2 [496 kB] Get:2104 http://deb.debian.org/debian bookworm/main amd64 kleborate amd64 2.3.1-2 [7740 kB] Get:2105 http://deb.debian.org/debian bookworm/main amd64 kma amd64 1.4.11-1 [214 kB] Get:2106 http://deb.debian.org/debian bookworm/main amd64 sim4db amd64 0~20150903+r2013-8+b3 [441 kB] Get:2107 http://deb.debian.org/debian bookworm/main amd64 kmer all 0~20150903+r2013-8 [5620 B] Get:2108 http://deb.debian.org/debian bookworm/main amd64 kmer-examples all 0~20150903+r2013-8 [2353 kB] Get:2109 http://deb.debian.org/debian bookworm/main amd64 kmerresistance amd64 2.2.0-4 [11.3 kB] Get:2110 http://deb.debian.org/debian bookworm/main amd64 kraken amd64 1.1.1-4 [752 kB] Get:2111 http://deb.debian.org/debian bookworm/main amd64 kraken2 amd64 2.1.2-2 [832 kB] Get:2112 http://deb.debian.org/debian bookworm/main amd64 ksh93u+m amd64 1.0.4-3 [890 kB] Get:2113 http://deb.debian.org/debian bookworm/main amd64 ksh all 20230128 [41.5 kB] Get:2114 http://deb.debian.org/debian bookworm/main amd64 lagan amd64 2.0-9 [184 kB] Get:2115 http://deb.debian.org/debian bookworm/main amd64 lamarc amd64 2.1.10.1+dfsg-7+b2 [3803 kB] Get:2116 http://deb.debian.org/debian bookworm/main amd64 last-align amd64 1447-1+b1 [2572 kB] Get:2117 http://deb.debian.org/debian bookworm/main amd64 lamassemble all 1.4.2-5 [106 kB] Get:2118 http://deb.debian.org/debian bookworm/main amd64 lambda-align amd64 1.0.3-6 [1249 kB] Get:2119 http://deb.debian.org/debian bookworm/main amd64 lambda-align2 amd64 2.0.0-9 [2107 kB] Get:2120 http://deb.debian.org/debian bookworm/main amd64 laptop-detect all 0.16 [7238 B] Get:2121 http://deb.debian.org/debian bookworm/main amd64 lastz amd64 1.04.22-2 [521 kB] Get:2122 http://deb.debian.org/debian bookworm/main amd64 liblzf1 amd64 3.6-3 [10.2 kB] Get:2123 http://deb.debian.org/debian bookworm/main amd64 python3-h5py-serial amd64 3.7.0-8 [804 kB] Get:2124 http://deb.debian.org/debian bookworm/main amd64 python3-h5py all 3.7.0-8 [10.3 kB] Get:2125 http://deb.debian.org/debian bookworm/main amd64 python3-biom-format amd64 2.1.12-3+b1 [128 kB] Get:2126 http://deb.debian.org/debian bookworm/main amd64 python3-pytz-deprecation-shim all 0.1.0.post0-3 [14.4 kB] Get:2127 http://deb.debian.org/debian bookworm/main amd64 python3-tzlocal all 4.2-1 [24.6 kB] Get:2128 http://deb.debian.org/debian bookworm/main amd64 python3-rpy2 amd64 3.5.9-1 [201 kB] Get:2129 http://deb.debian.org/debian bookworm/main amd64 r-cran-mvtnorm amd64 1.1-3-1+b1 [222 kB] Get:2130 http://deb.debian.org/debian bookworm/main amd64 r-cran-libcoin amd64 1.0-9-1+b1 [937 kB] Get:2131 http://deb.debian.org/debian bookworm/main amd64 r-cran-matrixstats amd64 0.63.0-1 [470 kB] Get:2132 http://deb.debian.org/debian bookworm/main amd64 r-cran-modeltools all 0.2-23-2 [214 kB] Get:2133 http://deb.debian.org/debian bookworm/main amd64 r-cran-th.data all 1.1-1-1 [8783 kB] Get:2134 http://deb.debian.org/debian bookworm/main amd64 r-cran-zoo amd64 1.8-11-1 [988 kB] Get:2135 http://deb.debian.org/debian bookworm/main amd64 r-cran-sandwich all 3.0-2-1 [1438 kB] Get:2136 http://deb.debian.org/debian bookworm/main amd64 r-cran-codetools all 0.2-19-1 [90.9 kB] Get:2137 http://deb.debian.org/debian bookworm/main amd64 r-cran-multcomp all 1.4-22-1 [708 kB] Get:2138 http://deb.debian.org/debian bookworm/main amd64 r-cran-coin amd64 1.4-2-1+b1 [1557 kB] Get:2139 http://deb.debian.org/debian bookworm/main amd64 lefse all 1.1.2-1 [57.5 kB] Get:2140 http://deb.debian.org/debian bookworm/main amd64 libaacs0 amd64 0.11.1-2 [57.1 kB] Get:2141 http://deb.debian.org/debian bookworm/main amd64 libipc-sharelite-perl amd64 0.17-5 [23.1 kB] Get:2142 http://deb.debian.org/debian bookworm/main amd64 libcache-cache-perl all 1.08-3 [63.4 kB] Get:2143 http://deb.debian.org/debian bookworm/main amd64 libace-perl amd64 1.92-11+b2 [283 kB] Get:2144 http://deb.debian.org/debian bookworm/main amd64 libaec-dev amd64 1.0.6-1+b1 [19.9 kB] Get:2145 http://deb.debian.org/debian bookworm/main amd64 libfann2 amd64 2.2.0+ds-8 [61.7 kB] Get:2146 http://deb.debian.org/debian bookworm/main amd64 libai-fann-perl amd64 0.10-5+b3 [28.4 kB] Get:2147 http://deb.debian.org/debian bookworm/main amd64 libalglib3.19 amd64 3.19.0-1 [1237 kB] Get:2148 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-diff-xs-perl amd64 0.04-8+b1 [11.4 kB] Get:2149 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-merge-perl all 0.08-5 [11.8 kB] Get:2150 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-munkres-perl all 0.08-5 [11.3 kB] Get:2151 http://deb.debian.org/debian bookworm/main amd64 libsvm3 amd64 3.24+ds-6 [43.6 kB] Get:2152 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-svm-perl amd64 0.13-3+b1 [30.6 kB] Get:2153 http://deb.debian.org/debian bookworm/main amd64 liburi-escape-xs-perl amd64 0.14-2+b1 [15.2 kB] Get:2154 http://deb.debian.org/debian bookworm/main amd64 libany-uri-escape-perl all 0.01-4 [5036 B] Get:2155 http://deb.debian.org/debian bookworm/main amd64 libposix-strftime-compiler-perl all 0.44-3 [11.9 kB] Get:2156 http://deb.debian.org/debian bookworm/main amd64 libapache-logformat-compiler-perl all 0.36-3 [11.5 kB] Get:2157 http://deb.debian.org/debian bookworm/main amd64 libapache2-reload-perl all 0.13-4 [15.9 kB] Get:2158 http://deb.debian.org/debian bookworm/main amd64 libapfloat-java all 1.10.1-2 [620 kB] Get:2159 http://deb.debian.org/debian bookworm/main amd64 libarchive-cpio-perl all 0.10-3 [10.8 kB] Get:2160 http://deb.debian.org/debian bookworm/main amd64 libarmadillo11 amd64 1:11.4.2+dfsg-1 [98.9 kB] Get:2161 http://deb.debian.org/debian bookworm/main amd64 libtype-tiny-perl all 2.002001-1 [377 kB] Get:2162 http://deb.debian.org/debian bookworm/main amd64 libarray-compare-perl all 3.0.8-1 [14.9 kB] Get:2163 http://deb.debian.org/debian bookworm/main amd64 libarray-utils-perl all 0.5-3 [6184 B] Get:2164 http://deb.debian.org/debian bookworm/main amd64 libasa-perl all 1.04-3 [10.7 kB] Get:2165 http://deb.debian.org/debian bookworm/main amd64 libasync-interrupt-perl amd64 1.26-1+b3 [33.3 kB] Get:2166 http://deb.debian.org/debian bookworm/main amd64 libxkbfile1 amd64 1:1.1.0-1 [75.2 kB] Get:2167 http://deb.debian.org/debian bookworm/main amd64 libxmuu1 amd64 2:1.1.3-3 [23.9 kB] Get:2168 http://deb.debian.org/debian bookworm/main amd64 libxxf86dga1 amd64 2:1.1.5-1 [22.1 kB] Get:2169 http://deb.debian.org/debian bookworm/main amd64 x11-utils amd64 7.7+5 [202 kB] Get:2170 http://deb.debian.org/debian bookworm/main amd64 libatk-wrapper-java all 0.40.0-3 [63.4 kB] Get:2171 http://deb.debian.org/debian bookworm/main amd64 libatk-wrapper-java-jni amd64 0.40.0-3 [54.6 kB] Get:2172 http://deb.debian.org/debian bookworm/main amd64 libatm1 amd64 1:2.5.1-4+b2 [68.3 kB] Get:2173 http://deb.debian.org/debian bookworm/main amd64 libauthen-sasl-perl all 2.1600-3 [43.9 kB] Get:2174 http://deb.debian.org/debian bookworm/main amd64 libavogadro-data all 1.97.0-3 [261 kB] Get:2175 http://deb.debian.org/debian bookworm/main amd64 libpkgconf3 amd64 1.8.1-1 [36.1 kB] Get:2176 http://deb.debian.org/debian bookworm/main amd64 pkgconf-bin amd64 1.8.1-1 [29.5 kB] Get:2177 http://deb.debian.org/debian bookworm/main amd64 pkgconf amd64 1.8.1-1 [25.9 kB] Get:2178 http://deb.debian.org/debian bookworm/main amd64 pkg-config amd64 1.8.1-1 [13.7 kB] Get:2179 http://deb.debian.org/debian bookworm/main amd64 libbambamc-dev amd64 0.0.50-6+b1 [51.5 kB] Get:2180 http://deb.debian.org/debian bookworm/main amd64 libbamtools-dev amd64 2.5.2+dfsg-4 [214 kB] Get:2181 http://deb.debian.org/debian bookworm/main amd64 libbdplus0 amd64 0.2.0-3 [52.6 kB] Get:2182 http://deb.debian.org/debian bookworm/main amd64 libbeam-java all 1.3.3-3 [187 kB] Get:2183 http://deb.debian.org/debian bookworm/main amd64 libbenchmark1debian amd64 1.7.1-1 [124 kB] Get:2184 http://deb.debian.org/debian bookworm/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get:2185 http://deb.debian.org/debian bookworm/main amd64 libbetter-appframework-java all 1.9.2-1.1 [170 kB] Get:2186 http://deb.debian.org/debian bookworm/main amd64 libbigwig-dev amd64 0.4.7+dfsg-3 [37.2 kB] Get:2187 http://deb.debian.org/debian bookworm/main amd64 libbio-alignio-stockholm-perl all 1.7.3-2 [23.1 kB] Get:2188 http://deb.debian.org/debian bookworm/main amd64 libwww-curl-perl amd64 4.17-10 [58.3 kB] Get:2189 http://deb.debian.org/debian bookworm/main amd64 libbio-das-lite-perl all 2.11-8 [26.2 kB] Get:2190 http://deb.debian.org/debian bookworm/main amd64 libbio-db-embl-perl all 1.7.4-4 [7820 B] Get:2191 http://deb.debian.org/debian bookworm/main amd64 libbio-db-hts-perl amd64 3.01-4+b1 [157 kB] Get:2192 http://deb.debian.org/debian bookworm/main amd64 libbio-db-ncbihelper-perl all 1.7.7-1 [58.4 kB] Get:2193 http://deb.debian.org/debian bookworm/main amd64 libbio-mage-perl all 20030502.3-6 [1046 kB] Get:2194 http://deb.debian.org/debian bookworm/main amd64 libbio-mage-utils-perl all 20030502.0-5 [52.7 kB] Get:2195 http://deb.debian.org/debian bookworm/main amd64 libclass-base-perl all 0.09-2 [17.8 kB] Get:2196 http://deb.debian.org/debian bookworm/main amd64 primer3 amd64 2.6.1-4 [202 kB] Get:2197 http://deb.debian.org/debian bookworm/main amd64 ncbi-epcr amd64 2.3.12-1-9 [168 kB] Get:2198 http://deb.debian.org/debian bookworm/main amd64 libbio-primerdesigner-perl all 0.07-8 [45.0 kB] Get:2199 http://deb.debian.org/debian bookworm/main amd64 libbio-samtools-perl amd64 1.43-3+b3 [188 kB] Get:2200 http://deb.debian.org/debian bookworm/main amd64 libstaden-read14 amd64 1.14.15-1 [265 kB] Get:2201 http://deb.debian.org/debian bookworm/main amd64 libbio-scf-perl amd64 1.03-6+b1 [20.1 kB] Get:2202 http://deb.debian.org/debian bookworm/main amd64 libbio-searchio-hmmer-perl all 1.7.3-2 [95.9 kB] Get:2203 http://deb.debian.org/debian bookworm/main amd64 paml amd64 4.9j+dfsg-4 [704 kB] Get:2204 http://deb.debian.org/debian bookworm/main amd64 libbio-tools-phylo-paml-perl all 1.7.3-4 [80.7 kB] Get:2205 http://deb.debian.org/debian bookworm/main amd64 t-coffee amd64 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 [1032 kB] Get:2206 http://deb.debian.org/debian bookworm/main amd64 libbio-tools-run-alignment-tcoffee-perl all 1.7.4-3 [23.2 kB] Get:2207 http://deb.debian.org/debian bookworm/main amd64 libbiococoa2 amd64 2.2.2-6 [118 kB] Get:2208 http://deb.debian.org/debian bookworm/main amd64 libgnustep-base-dev amd64 1.28.1+really1.28.0-5 [2049 kB] Get:2209 http://deb.debian.org/debian bookworm/main amd64 libbiococoa-dev amd64 2.2.2-6 [116 kB] Get:2210 http://deb.debian.org/debian bookworm/main amd64 libnetx-java all 0.5-4 [138 kB] Get:2211 http://deb.debian.org/debian bookworm/main amd64 libxmlunit-java all 1.6-2 [100 kB] Get:2212 http://deb.debian.org/debian bookworm/main amd64 libhsqldb-java all 2.7.1-1+deb12u1 [1655 kB] Get:2213 http://deb.debian.org/debian bookworm/main amd64 libbiojava4.0-java all 4.2.12+dfsg-8 [5513 kB] Get:2214 http://deb.debian.org/debian bookworm/main amd64 libbiojava4-java all 4.2.12+dfsg-8 [4428 B] Get:2215 http://deb.debian.org/debian bookworm/main amd64 libbiosoup-dev all 0.10.0-4 [7784 B] Get:2216 http://deb.debian.org/debian bookworm/main amd64 libbioparser-dev all 3.0.15-3 [9032 B] Get:2217 http://deb.debian.org/debian bookworm/main amd64 libbit-vector-perl amd64 7.4-2+b1 [142 kB] Get:2218 http://deb.debian.org/debian bookworm/main amd64 libpbcopper-dev amd64 2.0.0+dfsg-2 [920 kB] Get:2219 http://deb.debian.org/debian bookworm/main amd64 libpbdata-dev amd64 5.3.5+dfsg-4+b2 [41.6 kB] Get:2220 http://deb.debian.org/debian bookworm/main amd64 libblasr-dev amd64 5.3.5+dfsg-4+b2 [2073 kB] Get:2221 http://deb.debian.org/debian bookworm/main amd64 libblosc1 amd64 1.21.3+ds-1 [49.3 kB] Get:2222 http://deb.debian.org/debian bookworm/main amd64 libboost-atomic1.74.0 amd64 1.74.0+ds1-21 [220 kB] Get:2223 http://deb.debian.org/debian bookworm/main amd64 libboost-system1.74.0 amd64 1.74.0+ds1-21 [218 kB] Get:2224 http://deb.debian.org/debian bookworm/main amd64 libboost-system1.74-dev amd64 1.74.0+ds1-21 [219 kB] Get:2225 http://deb.debian.org/debian bookworm/main amd64 libboost-filesystem1.74-dev amd64 1.74.0+ds1-21 [279 kB] Get:2226 http://deb.debian.org/debian bookworm/main amd64 libicu-dev amd64 72.1-3 [10.3 MB] Get:2227 http://deb.debian.org/debian bookworm/main amd64 libboost-regex1.74-dev amd64 1.74.0+ds1-21 [557 kB] Get:2228 http://deb.debian.org/debian bookworm/main amd64 libboost-iostreams1.74-dev amd64 1.74.0+ds1-21 [248 kB] Get:2229 http://deb.debian.org/debian bookworm/main amd64 libboost-math1.74.0 amd64 1.74.0+ds1-21 [490 kB] Get:2230 http://deb.debian.org/debian bookworm/main amd64 libboost-mpi1.74.0 amd64 1.74.0+ds1-21 [258 kB] Get:2231 http://deb.debian.org/debian bookworm/main amd64 libboost-python1.74.0 amd64 1.74.0+ds1-21 [289 kB] Get:2232 http://deb.debian.org/debian bookworm/main amd64 libboost-regex-dev amd64 1.74.0.3 [4600 B] Get:2233 http://deb.debian.org/debian bookworm/main amd64 libboost-timer1.74.0 amd64 1.74.0+ds1-21 [226 kB] Get:2234 http://deb.debian.org/debian bookworm/main amd64 libbpp-core-dev amd64 2.4.1-9 [944 kB] Get:2235 http://deb.debian.org/debian bookworm/main amd64 libbpp-seq-dev amd64 2.4.1-9 [728 kB] Get:2236 http://deb.debian.org/debian bookworm/main amd64 libbpp-phyl-dev amd64 2.4.1-8 [2986 kB] Get:2237 http://deb.debian.org/debian bookworm/main amd64 libbpp-seq-omics3 amd64 2.4.1-9 [215 kB] Get:2238 http://deb.debian.org/debian bookworm/main amd64 libbpp-phyl-omics3 amd64 2.4.1-4 [72.9 kB] Get:2239 http://deb.debian.org/debian bookworm/main amd64 libbpp-seq-omics-dev amd64 2.4.1-9 [366 kB] Get:2240 http://deb.debian.org/debian bookworm/main amd64 libbpp-phyl-omics-dev amd64 2.4.1-4 [131 kB] Get:2241 http://deb.debian.org/debian bookworm/main amd64 libbpp-popgen-dev amd64 2.4.1-8 [303 kB] Get:2242 http://deb.debian.org/debian bookworm/main amd64 libqt5qmlworkerscript5 amd64 5.15.8+dfsg-3 [34.8 kB] Get:2243 http://deb.debian.org/debian bookworm/main amd64 libqt5quickparticles5 amd64 5.15.8+dfsg-3 [205 kB] Get:2244 http://deb.debian.org/debian bookworm/main amd64 libqt5quickshapes5 amd64 5.15.8+dfsg-3 [97.2 kB] Get:2245 http://deb.debian.org/debian bookworm/main amd64 libqt5quicktest5 amd64 5.15.8+dfsg-3 [56.3 kB] Get:2246 http://deb.debian.org/debian bookworm/main amd64 qt5-qmltooling-plugins amd64 5.15.8+dfsg-3 [178 kB] Get:2247 http://deb.debian.org/debian bookworm/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get:2248 http://deb.debian.org/debian bookworm/main amd64 x11proto-dev all 2022.1-1 [599 kB] Get:2249 http://deb.debian.org/debian bookworm/main amd64 libxau-dev amd64 1:1.0.9-1 [22.9 kB] Get:2250 http://deb.debian.org/debian bookworm/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [42.2 kB] Get:2251 http://deb.debian.org/debian bookworm/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get:2252 http://deb.debian.org/debian bookworm/main amd64 libpthread-stubs0-dev amd64 0.4-1 [5344 B] Get:2253 http://deb.debian.org/debian bookworm/main amd64 libxcb1-dev amd64 1.15-1 [181 kB] Get:2254 http://deb.debian.org/debian bookworm/main amd64 libx11-dev amd64 2:1.8.4-2+deb12u2 [837 kB] Get:2255 http://deb.debian.org/debian bookworm/main amd64 libglx-dev amd64 1.6.0-1 [15.3 kB] Get:2256 http://deb.debian.org/debian bookworm/main amd64 libgl-dev amd64 1.6.0-1 [100 kB] Get:2257 http://deb.debian.org/debian bookworm/main amd64 libegl-dev amd64 1.6.0-1 [19.1 kB] Get:2258 http://deb.debian.org/debian bookworm/main amd64 libopengl-dev amd64 1.6.0-1 [4936 B] Get:2259 http://deb.debian.org/debian bookworm/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1 [216 kB] Get:2260 http://deb.debian.org/debian bookworm/main amd64 libqt5sql5 amd64 5.15.8+dfsg-11 [122 kB] Get:2261 http://deb.debian.org/debian bookworm/main amd64 libvulkan-dev amd64 1.3.239.0-1 [1115 kB] Get:2262 http://deb.debian.org/debian bookworm/main amd64 libxext-dev amd64 2:1.3.4-1+b1 [107 kB] Get:2263 http://deb.debian.org/debian bookworm/main amd64 qt5-qmake-bin amd64 5.15.8+dfsg-11 [1023 kB] Get:2264 http://deb.debian.org/debian bookworm/main amd64 qtchooser amd64 66-2 [26.3 kB] Get:2265 http://deb.debian.org/debian bookworm/main amd64 qt5-qmake amd64 5.15.8+dfsg-11 [221 kB] Get:2266 http://deb.debian.org/debian bookworm/main amd64 qtbase5-dev-tools amd64 5.15.8+dfsg-11 [757 kB] Get:2267 http://deb.debian.org/debian bookworm/main amd64 qtbase5-dev amd64 5.15.8+dfsg-11 [1121 kB] Get:2268 http://deb.debian.org/debian bookworm/main amd64 qtdeclarative5-dev-tools amd64 5.15.8+dfsg-3 [616 kB] Get:2269 http://deb.debian.org/debian bookworm/main amd64 qtdeclarative5-dev amd64 5.15.8+dfsg-3 [455 kB] Get:2270 http://deb.debian.org/debian bookworm/main amd64 libbpp-qt-dev amd64 2.4.1-8 [89.3 kB] Get:2271 http://deb.debian.org/debian bookworm/main amd64 libbpp-raa4 amd64 2.4.1-7 [52.8 kB] Get:2272 http://deb.debian.org/debian bookworm/main amd64 libbpp-raa-dev amd64 2.4.1-7 [65.6 kB] Get:2273 http://deb.debian.org/debian bookworm/main amd64 libbrotli-dev amd64 1.0.9-2+b6 [287 kB] Get:2274 http://deb.debian.org/debian bookworm/main amd64 libbsd-resource-perl amd64 1.2911-2+b1 [31.8 kB] Get:2275 http://deb.debian.org/debian bookworm/main amd64 libbtf1 amd64 1:5.12.0+dfsg-2 [25.6 kB] Get:2276 http://deb.debian.org/debian bookworm/main amd64 libbwa-dev amd64 0.7.17-7+b2 [156 kB] Get:2277 http://deb.debian.org/debian bookworm/main amd64 libbz2-dev amd64 1.0.8-5+b1 [30.9 kB] Get:2278 http://deb.debian.org/debian bookworm/main amd64 libc-ares2 amd64 1.18.1-3 [102 kB] Get:2279 http://deb.debian.org/debian bookworm/main amd64 libc-devtools amd64 2.36-9+deb12u4 [53.0 kB] Get:2280 http://deb.debian.org/debian bookworm/main amd64 libc6-dbg amd64 2.36-9+deb12u4 [7458 kB] Get:2281 http://deb.debian.org/debian bookworm/main amd64 libcaf-openmpi-3 amd64 2.10.1-1+b1 [37.1 kB] Get:2282 http://deb.debian.org/debian bookworm/main amd64 libcairo-perl amd64 1.109-3+b1 [91.6 kB] Get:2283 http://deb.debian.org/debian bookworm/main amd64 libcbf1 amd64 0.9.7+dfsg1-2+b2 [353 kB] Get:2284 http://deb.debian.org/debian bookworm/main amd64 libccp4f0 amd64 8.0.0-2 [210 kB] Get:2285 http://deb.debian.org/debian bookworm/main amd64 libccp4-dev amd64 8.0.0-2 [42.8 kB] Get:2286 http://deb.debian.org/debian bookworm/main amd64 libcommons-text-java all 1.10.0-1 [211 kB] Get:2287 http://deb.debian.org/debian bookworm/main amd64 libdoxia-core-java all 1.12.0-1 [213 kB] Get:2288 http://deb.debian.org/debian bookworm/main amd64 libfontbox2-java all 2.0.27-2 [1510 kB] Get:2289 http://deb.debian.org/debian bookworm/main amd64 libfop-java all 1:2.8-2 [10.1 MB] Get:2290 http://deb.debian.org/debian bookworm/main amd64 libdoxia-java all 1.12.0-1 [459 kB] Get:2291 http://deb.debian.org/debian bookworm/main amd64 libmaven-reporting-api-java all 3.1.1-1 [7240 B] Get:2292 http://deb.debian.org/debian bookworm/main amd64 libplexus-i18n-java all 1.0-beta-10-6 [13.4 kB] Get:2293 http://deb.debian.org/debian bookworm/main amd64 velocity all 1.7-6 [429 kB] Get:2294 http://deb.debian.org/debian bookworm/main amd64 libplexus-velocity-java all 1.2-3.1 [10.5 kB] Get:2295 http://deb.debian.org/debian bookworm/main amd64 libcommons-digester-java all 1.8.1-5 [168 kB] Get:2296 http://deb.debian.org/debian bookworm/main amd64 libcommons-validator-java all 1:1.7-1 [181 kB] Get:2297 http://deb.debian.org/debian bookworm/main amd64 liboro-java all 2.0.8a-14 [70.5 kB] Get:2298 http://deb.debian.org/debian bookworm/main amd64 libvelocity-tools-java all 2.0-8 [308 kB] Get:2299 http://deb.debian.org/debian bookworm/main amd64 libxalan2-java all 2.7.2-4 [3419 kB] Get:2300 http://deb.debian.org/debian bookworm/main amd64 libdoxia-sitetools-java all 1.11.1-1 [202 kB] Get:2301 http://deb.debian.org/debian bookworm/main amd64 libmaven-reporting-impl-java all 3.2.0-2 [15.2 kB] Get:2302 http://deb.debian.org/debian bookworm/main amd64 libjavacc-maven-plugin-java all 2.6-5 [78.1 kB] Get:2303 http://deb.debian.org/debian bookworm/main amd64 libjoda-time-java all 2.10.14-1 [539 kB] Get:2304 http://deb.debian.org/debian bookworm/main amd64 libxom-java all 1.3.8-1 [174 kB] Get:2305 http://deb.debian.org/debian bookworm/main amd64 libeuclid-java all 2.3-1 [395 kB] Get:2306 http://deb.debian.org/debian bookworm/main amd64 libtagsoup-java all 1.2.1+-1.1 [102 kB] Get:2307 http://deb.debian.org/debian bookworm/main amd64 libcmlxom-java all 4.3-1 [989 kB] Get:2308 http://deb.debian.org/debian bookworm/main amd64 libfreehep-graphicsio-pdf-java all 2.4+dfsg-3 [75.5 kB] Get:2309 http://deb.debian.org/debian bookworm/main amd64 libfreehep-graphicsio-ps-java all 2.4+dfsg-3 [52.6 kB] Get:2310 http://deb.debian.org/debian bookworm/main amd64 libjama-java all 1.0.3-2 [31.3 kB] Get:2311 http://deb.debian.org/debian bookworm/main amd64 libsignatures-java all 1.1.10.g614270e+ds-1 [44.7 kB] Get:2312 http://deb.debian.org/debian bookworm/main amd64 libcdk-java all 1:2.8-2 [7414 kB] Get:2313 http://deb.debian.org/debian bookworm/main amd64 rapidjson-dev all 1.1.0+dfsg2-7.1 [97.7 kB] Get:2314 http://deb.debian.org/debian bookworm/main amd64 libcereal-dev amd64 1.3.2+dfsg-4 [221 kB] Get:2315 http://deb.debian.org/debian bookworm/main amd64 libcfitsio10 amd64 4.2.0-3 [563 kB] Get:2316 http://deb.debian.org/debian bookworm/main amd64 libfile-pushd-perl all 1.016-2 [13.5 kB] Get:2317 http://deb.debian.org/debian bookworm/main amd64 libcgi-compile-perl all 0.25-1 [15.6 kB] Get:2318 http://deb.debian.org/debian bookworm/main amd64 libcgi-emulate-psgi-perl all 0.23-2 [12.4 kB] Get:2319 http://deb.debian.org/debian bookworm/main amd64 libcgi-fast-perl all 1:2.15-1 [12.1 kB] Get:2320 http://deb.debian.org/debian bookworm/main amd64 libcharls2 amd64 2.4.1-1 [86.1 kB] Get:2321 http://deb.debian.org/debian bookworm/main amd64 libcharts4j-java all 1.3-4 [162 kB] Get:2322 http://deb.debian.org/debian bookworm/main amd64 libcifpp-dev amd64 5.0.7.1-1 [86.1 kB] Get:2323 http://deb.debian.org/debian bookworm/main amd64 libllvm14 amd64 1:14.0.6-12 [21.8 MB] Get:2324 http://deb.debian.org/debian bookworm/main amd64 libclang-cpp14 amd64 1:14.0.6-12 [11.1 MB] Get:2325 http://deb.debian.org/debian bookworm/main amd64 libclass-autoloadcan-perl all 0.03-4 [11.4 kB] Get:2326 http://deb.debian.org/debian bookworm/main amd64 libprefork-perl all 1.05-2 [13.6 kB] Get:2327 http://deb.debian.org/debian bookworm/main amd64 libclass-autouse-perl all 2.01-1.1 [27.0 kB] Get:2328 http://deb.debian.org/debian bookworm/main amd64 libclass-c3-xs-perl amd64 0.15-1+b3 [17.0 kB] Get:2329 http://deb.debian.org/debian bookworm/main amd64 libsql-abstract-limit-perl all 2:0.14.3-1 [20.1 kB] Get:2330 http://deb.debian.org/debian bookworm/main amd64 libclass-dbi-abstractsearch-perl all 0.07-4.1 [7964 B] Get:2331 http://deb.debian.org/debian bookworm/main amd64 libclass-singleton-perl all 1.6-2 [12.5 kB] Get:2332 http://deb.debian.org/debian bookworm/main amd64 libclass-tiny-perl all 1.008-2 [18.6 kB] Get:2333 http://deb.debian.org/debian bookworm/main amd64 libmmdb2-dev amd64 2.0.22-1 [92.9 kB] Get:2334 http://deb.debian.org/debian bookworm/main amd64 sfftw-dev amd64 2.1.5-6 [281 kB] Get:2335 http://deb.debian.org/debian bookworm/main amd64 libclipper-dev amd64 2.1.20201109-1 [82.6 kB] Get:2336 http://deb.debian.org/debian bookworm/main amd64 libclone-pp-perl all 1.08-2 [9224 B] Get:2337 http://deb.debian.org/debian bookworm/main amd64 libcvector2 amd64 1.0.4.1-2+b1 [6212 B] Get:2338 http://deb.debian.org/debian bookworm/main amd64 libcneartree7 amd64 5.1.1+dfsg1-2 [29.2 kB] Get:2339 http://deb.debian.org/debian bookworm/main amd64 libcoarrays-dev amd64 2.10.1-1+b1 [37.2 kB] Get:2340 http://deb.debian.org/debian bookworm/main amd64 libcoarrays-openmpi-dev amd64 2.10.1-1+b1 [463 kB] Get:2341 http://deb.debian.org/debian bookworm/main amd64 libcombblas1.16.0 amd64 1.6.2-8 [284 kB] Get:2342 http://deb.debian.org/debian bookworm/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:2343 http://deb.debian.org/debian bookworm/main amd64 libconfig-tiny-perl all 2.28-2 [16.4 kB] Get:2344 http://deb.debian.org/debian bookworm/main amd64 libconsensuscore-dev amd64 1.1.1+dfsg-4+b1 [456 kB] Get:2345 http://deb.debian.org/debian bookworm/main amd64 libwant-perl amd64 0.29-2+b1 [27.5 kB] Get:2346 http://deb.debian.org/debian bookworm/main amd64 libcontextual-return-perl all 0.004014-4 [54.9 kB] Get:2347 http://deb.debian.org/debian bookworm/main amd64 libcontrolsfx-java all 11.0.0-1 [860 kB] Get:2348 http://deb.debian.org/debian bookworm/main amd64 libconvert-binary-c-perl amd64 0.84-1+b2 [272 kB] Get:2349 http://deb.debian.org/debian bookworm/main amd64 libcookie-baker-perl all 0.11-3 [8884 B] Get:2350 http://deb.debian.org/debian bookworm/main amd64 libcookie-baker-xs-perl amd64 0.12-1+b1 [9148 B] Get:2351 http://deb.debian.org/debian bookworm/main amd64 libcoordgen3 amd64 3.0.1-1 [211 kB] Get:2352 http://deb.debian.org/debian bookworm/main amd64 libcpan-changes-perl all 0.400002-3 [29.6 kB] Get:2353 http://deb.debian.org/debian bookworm/main amd64 libcpuinfo0 amd64 0.0~git20220617.082deff-1 [21.5 kB] Get:2354 http://deb.debian.org/debian bookworm/main amd64 libcqrlib2 amd64 1.1.4-3 [13.6 kB] Get:2355 http://deb.debian.org/debian bookworm/main amd64 libcrypt-rc4-perl all 2.02-5 [7480 B] Get:2356 http://deb.debian.org/debian bookworm/main amd64 nss-plugin-pem amd64 1.0.8+1-1 [54.6 kB] Get:2357 http://deb.debian.org/debian bookworm/main amd64 libcurl3-nss amd64 7.88.1-10+deb12u5 [394 kB] Get:2358 http://deb.debian.org/debian bookworm/main amd64 libcurl4-gnutls-dev amd64 7.88.1-10+deb12u5 [485 kB] Get:2359 http://deb.debian.org/debian bookworm/main amd64 libcxsparse3 amd64 1:5.12.0+dfsg-2 [80.7 kB] Get:2360 http://deb.debian.org/debian bookworm/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:2361 http://deb.debian.org/debian bookworm/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:2362 http://deb.debian.org/debian bookworm/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:2363 http://deb.debian.org/debian bookworm/main amd64 libdata-compare-perl all 1.27-3 [19.4 kB] Get:2364 http://deb.debian.org/debian bookworm/main amd64 libdata-dump-perl all 1.25-1 [28.4 kB] Get:2365 http://deb.debian.org/debian bookworm/main amd64 libdata-perl-perl all 0.002011-2 [40.8 kB] Get:2366 http://deb.debian.org/debian bookworm/main amd64 libdata-section-perl all 0.200008-1 [13.1 kB] Get:2367 http://deb.debian.org/debian bookworm/main amd64 libdata-uuid-libuuid-perl amd64 0.05-5 [14.5 kB] Get:2368 http://deb.debian.org/debian bookworm/main amd64 libdate-calc-perl all 6.4-2 [191 kB] Get:2369 http://deb.debian.org/debian bookworm/main amd64 libdate-calc-xs-perl amd64 6.4-2+b1 [52.0 kB] Get:2370 http://deb.debian.org/debian bookworm/main amd64 libdate-manip-perl all 6.91-1 [912 kB] Get:2371 http://deb.debian.org/debian bookworm/main amd64 libnamespace-autoclean-perl all 0.29-2 [13.5 kB] Get:2372 http://deb.debian.org/debian bookworm/main amd64 libparams-validationcompiler-perl all 0.31-1 [30.9 kB] Get:2373 http://deb.debian.org/debian bookworm/main amd64 libxstring-perl amd64 0.005-2+b1 [8320 B] Get:2374 http://deb.debian.org/debian bookworm/main amd64 libspecio-perl all 0.48-1 [142 kB] Get:2375 http://deb.debian.org/debian bookworm/main amd64 libdatetime-locale-perl all 1:1.37-1 [2776 kB] Get:2376 http://deb.debian.org/debian bookworm/main amd64 libdatetime-timezone-perl all 1:2.60-1+2024a [265 kB] Get:2377 http://deb.debian.org/debian bookworm/main amd64 libdatetime-perl amd64 2:1.59-1 [116 kB] Get:2378 http://deb.debian.org/debian bookworm/main amd64 libdatetime-format-strptime-perl all 1.7900-1 [37.3 kB] Get:2379 http://deb.debian.org/debian bookworm/main amd64 libdatetime-format-builder-perl all 0.8300-1 [63.8 kB] Get:2380 http://deb.debian.org/debian bookworm/main amd64 libdatetime-format-iso8601-perl all 0.16-2 [22.4 kB] Get:2381 http://deb.debian.org/debian bookworm/main amd64 libdbd-mysql-perl amd64 4.050-5+b1 [114 kB] Get:2382 http://deb.debian.org/debian bookworm/main amd64 libmatthew-debug-java all 0.8.1-2 [13.9 kB] Get:2383 http://deb.debian.org/debian bookworm/main amd64 libunixsocket-java amd64 0.8.1-2 [16.2 kB] Get:2384 http://deb.debian.org/debian bookworm/main amd64 libdbus-java all 2.8-10 [142 kB] Get:2385 http://deb.debian.org/debian bookworm/main amd64 libdecor-0-plugin-1-cairo amd64 0.1.1-2 [20.1 kB] Get:2386 http://deb.debian.org/debian bookworm/main amd64 libdeflate-dev amd64 1.14-1 [53.3 kB] Get:2387 http://deb.debian.org/debian bookworm/main amd64 libpadwalker-perl amd64 2.5-1+b3 [18.3 kB] Get:2388 http://deb.debian.org/debian bookworm/main amd64 libdevel-argnames-perl all 0.03-3 [6112 B] Get:2389 http://deb.debian.org/debian bookworm/main amd64 libdevel-caller-perl amd64 2.06-3+b1 [10.9 kB] Get:2390 http://deb.debian.org/debian bookworm/main amd64 libdevel-lexalias-perl amd64 0.05-3+b1 [8316 B] Get:2391 http://deb.debian.org/debian bookworm/main amd64 libdevel-partialdump-perl all 0.20-2 [15.6 kB] Get:2392 http://deb.debian.org/debian bookworm/main amd64 libdevel-stacktrace-ashtml-perl all 0.15-2 [12.8 kB] Get:2393 http://deb.debian.org/debian bookworm/main amd64 libdigest-perl-md5-perl all 1.9-5 [11.7 kB] Get:2394 http://deb.debian.org/debian bookworm/main amd64 libdisorder-dev amd64 0.0.2+git20130809.8062ee1-4+b1 [4860 B] Get:2395 http://deb.debian.org/debian bookworm/main amd64 libdistlib-java-doc all 1.0-4 [259 kB] Get:2396 http://deb.debian.org/debian bookworm/main amd64 libdivsufsort-dev amd64 2.0.1-5 [19.1 kB] Get:2397 http://deb.debian.org/debian bookworm/main amd64 libdjvulibre-text all 3.5.28-2 [61.8 kB] Get:2398 http://deb.debian.org/debian bookworm/main amd64 libdjvulibre21 amd64 3.5.28-2+b1 [585 kB] Get:2399 http://deb.debian.org/debian bookworm/main amd64 libdnnl2 amd64 2.6.3-1 [6991 kB] Get:2400 http://deb.debian.org/debian bookworm/main amd64 libduktape207 amd64 2.7.0-2 [134 kB] Get:2401 http://deb.debian.org/debian bookworm/main amd64 libedlib1 amd64 1.2.7-4+b1 [17.8 kB] Get:2402 http://deb.debian.org/debian bookworm/main amd64 libedlib-dev amd64 1.2.7-4+b1 [22.6 kB] Get:2403 http://deb.debian.org/debian bookworm/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get:2404 http://deb.debian.org/debian bookworm/main amd64 libemail-date-format-perl all 1.008-1 [7356 B] Get:2405 http://deb.debian.org/debian bookworm/main amd64 libemf1 amd64 1.0.13-5 [63.9 kB] Get:2406 http://deb.debian.org/debian bookworm/main amd64 libenv-path-perl all 0.19-4 [19.1 kB] Get:2407 http://deb.debian.org/debian bookworm/main amd64 liberfa1 amd64 2.0.0-1+b1 [129 kB] Get:2408 http://deb.debian.org/debian bookworm/main amd64 libev-perl amd64 4.33-2 [258 kB] Get:2409 http://deb.debian.org/debian bookworm/main amd64 libev4 amd64 1:4.33-1 [43.2 kB] Get:2410 http://deb.debian.org/debian bookworm/main amd64 libevent-extra-2.1-7 amd64 2.1.12-stable-8 [107 kB] Get:2411 http://deb.debian.org/debian bookworm/main amd64 libevent-openssl-2.1-7 amd64 2.1.12-stable-8 [60.6 kB] Get:2412 http://deb.debian.org/debian bookworm/main amd64 libevent-dev amd64 2.1.12-stable-8 [305 kB] Get:2413 http://deb.debian.org/debian bookworm/main amd64 libexif12 amd64 0.6.24-1+b1 [402 kB] Get:2414 http://deb.debian.org/debian bookworm/main amd64 libhdf5-fortran-102 amd64 1.10.8+repack1-1 [93.3 kB] Get:2415 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-fortran-100 amd64 1.10.8+repack1-1 [44.5 kB] Get:2416 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-cpp-100 amd64 1.10.8+repack1-1 [25.5 kB] Get:2417 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-2 [290 kB] Get:2418 http://deb.debian.org/debian bookworm/main amd64 libjpeg-dev amd64 1:2.1.5-2 [71.8 kB] Get:2419 http://deb.debian.org/debian bookworm/main amd64 libssl-dev amd64 3.0.11-1~deb12u2 [2430 kB] Get:2420 http://deb.debian.org/debian bookworm/main amd64 libhdf5-dev amd64 1.10.8+repack1-1 [2615 kB] Get:2421 http://deb.debian.org/debian bookworm/main amd64 libfast5-dev all 0.6.5-7 [50.2 kB] Get:2422 http://deb.debian.org/debian bookworm/main amd64 libfastahack-dev amd64 1.0.0+dfsg-10 [27.0 kB] Get:2423 http://deb.debian.org/debian bookworm/main amd64 libfcgi-bin amd64 2.4.2-2 [12.9 kB] Get:2424 http://deb.debian.org/debian bookworm/main amd64 libfcgi-procmanager-perl all 0.28-3 [19.3 kB] Get:2425 http://deb.debian.org/debian bookworm/main amd64 libffi-dev amd64 3.4.4-1 [59.4 kB] Get:2426 http://deb.debian.org/debian bookworm/main amd64 libffindex0 amd64 0.9.9.9-6 [16.5 kB] Get:2427 http://deb.debian.org/debian bookworm/main amd64 libffindex0-dev amd64 0.9.9.9-6 [17.5 kB] Get:2428 http://deb.debian.org/debian bookworm/main amd64 libfftw3-long3 amd64 3.3.10-1 [337 kB] Get:2429 http://deb.debian.org/debian bookworm/main amd64 libfftw3-mpi3 amd64 3.3.10-1 [62.0 kB] Get:2430 http://deb.debian.org/debian bookworm/main amd64 libfile-chdir-perl all 0.1008-1.1 [12.2 kB] Get:2431 http://deb.debian.org/debian bookworm/main amd64 libfile-copy-link-perl all 0.140-4 [15.9 kB] Get:2432 http://deb.debian.org/debian bookworm/main amd64 libfile-desktopentry-perl all 0.22-3 [17.6 kB] Get:2433 http://deb.debian.org/debian bookworm/main amd64 libfile-fcntllock-perl amd64 0.22-4+b1 [34.8 kB] Get:2434 http://deb.debian.org/debian bookworm/main amd64 libfile-grep-perl all 0.02-3 [8352 B] Get:2435 http://deb.debian.org/debian bookworm/main amd64 libfile-mimeinfo-perl all 0.33-1 [48.3 kB] Get:2436 http://deb.debian.org/debian bookworm/main amd64 libfile-slurp-perl all 9999.32-2 [26.7 kB] Get:2437 http://deb.debian.org/debian bookworm/main amd64 libfile-slurper-perl all 0.014-1 [8560 B] Get:2438 http://deb.debian.org/debian bookworm/main amd64 libfilesys-notify-simple-perl all 0.14-3 [8116 B] Get:2439 http://deb.debian.org/debian bookworm/main amd64 libfltk1.3 amd64 1.3.8-5 [569 kB] Get:2440 http://deb.debian.org/debian bookworm/main amd64 libfltk-gl1.3 amd64 1.3.8-5 [79.1 kB] Get:2441 http://deb.debian.org/debian bookworm/main amd64 libfltk-images1.3 amd64 1.3.8-5 [66.0 kB] Get:2442 http://deb.debian.org/debian bookworm/main amd64 libfml-dev amd64 0.1+git20190320.b499514-1+b1 [82.9 kB] Get:2443 http://deb.debian.org/debian bookworm/main amd64 libfont-afm-perl all 1.20-4 [13.1 kB] Get:2444 http://deb.debian.org/debian bookworm/main amd64 libfontbox-java all 1:1.8.16-2 [211 kB] Get:2445 http://deb.debian.org/debian bookworm/main amd64 libpng-dev amd64 1.6.39-2 [359 kB] Get:2446 http://deb.debian.org/debian bookworm/main amd64 libfreetype-dev amd64 2.12.1+dfsg-5 [567 kB] Get:2447 http://deb.debian.org/debian bookworm/main amd64 uuid-dev amd64 2.38.1-5+b1 [39.9 kB] Get:2448 http://deb.debian.org/debian bookworm/main amd64 libfontconfig-dev amd64 2.14.1-4 [409 kB] Get:2449 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1-dev amd64 2.14.1-4 [268 kB] Get:2450 http://deb.debian.org/debian bookworm/main amd64 libfreexl1 amd64 1.0.6-2 [29.4 kB] Get:2451 http://deb.debian.org/debian bookworm/main amd64 libfuse2 amd64 2.9.9-6+b1 [119 kB] Get:2452 http://deb.debian.org/debian bookworm/main amd64 libfyba0 amd64 4.1.1-8 [112 kB] Get:2453 http://deb.debian.org/debian bookworm/main amd64 libg20 amd64 0.72-11 [40.6 kB] Get:2454 http://deb.debian.org/debian bookworm/main amd64 libgail18 amd64 2.24.33-2 [57.7 kB] Get:2455 http://deb.debian.org/debian bookworm/main amd64 libgail-common amd64 2.24.33-2 [160 kB] Get:2456 http://deb.debian.org/debian bookworm/main amd64 libgatbcore-dev amd64 1.4.2+dfsg-11 [3848 kB] Get:2457 http://deb.debian.org/debian bookworm/main amd64 libgclib-dev amd64 0.12.7+ds-5 [278 kB] Get:2458 http://deb.debian.org/debian bookworm/main amd64 libgd-svg-perl all 0.33-3 [59.9 kB] Get:2459 http://deb.debian.org/debian bookworm/main amd64 libgeos3.11.1 amd64 3.11.1-1 [752 kB] Get:2460 http://deb.debian.org/debian bookworm/main amd64 libgeos-c1v5 amd64 3.11.1-1 [83.2 kB] Get:2461 http://deb.debian.org/debian bookworm/main amd64 proj-data all 9.1.1-1 [6212 kB] Get:2462 http://deb.debian.org/debian bookworm/main amd64 libproj25 amd64 9.1.1-1+b1 [1277 kB] Get:2463 http://deb.debian.org/debian bookworm/main amd64 libgeotiff5 amd64 1.7.1-2+b1 [68.5 kB] Get:2464 http://deb.debian.org/debian bookworm/main amd64 libhdf4-0-alt amd64 4.2.15-5 [270 kB] Get:2465 http://deb.debian.org/debian bookworm/main amd64 liburiparser1 amd64 0.9.7+dfsg-2 [43.8 kB] Get:2466 http://deb.debian.org/debian bookworm/main amd64 libkmlbase1 amd64 1.3.0-10 [46.5 kB] Get:2467 http://deb.debian.org/debian bookworm/main amd64 libkmldom1 amd64 1.3.0-10 [153 kB] Get:2468 http://deb.debian.org/debian bookworm/main amd64 libkmlengine1 amd64 1.3.0-10 [74.4 kB] Get:2469 http://deb.debian.org/debian bookworm/main amd64 libnetcdf19 amd64 1:4.9.0-3+b1 [476 kB] Get:2470 http://deb.debian.org/debian bookworm/main amd64 libodbc2 amd64 2.3.11-2+deb12u1 [150 kB] Get:2471 http://deb.debian.org/debian bookworm/main amd64 unixodbc-common all 2.3.11-2+deb12u1 [8172 B] Get:2472 http://deb.debian.org/debian bookworm/main amd64 libodbcinst2 amd64 2.3.11-2+deb12u1 [34.2 kB] Get:2473 http://deb.debian.org/debian bookworm/main amd64 libogdi4.1 amd64 4.1.0+ds-6 [223 kB] Get:2474 http://deb.debian.org/debian bookworm/main amd64 libpoppler126 amd64 22.12.0-2+b1 [1852 kB] Get:2475 http://deb.debian.org/debian bookworm/main amd64 librttopo1 amd64 1.1.0-3 [178 kB] Get:2476 http://deb.debian.org/debian bookworm/main amd64 libspatialite7 amd64 5.0.1-3 [1782 kB] Get:2477 http://deb.debian.org/debian bookworm/main amd64 libgdal32 amd64 3.6.2+dfsg-1+b2 [7670 kB] Get:2478 http://deb.debian.org/debian bookworm/main amd64 libsocket++1 amd64 1.12.13+git20131030.5d039ba-1+b1 [78.3 kB] Get:2479 http://deb.debian.org/debian bookworm/main amd64 libgdcm3.0 amd64 3.0.21-1 [2253 kB] Get:2480 http://deb.debian.org/debian bookworm/main amd64 libgdk-pixbuf2.0-bin amd64 2.42.10+dfsg-1+b1 [17.9 kB] Get:2481 http://deb.debian.org/debian bookworm/main amd64 libgenome0 amd64 1.3.11+svn20110227.4616-5 [123 kB] Get:2482 http://deb.debian.org/debian bookworm/main amd64 libgenome-dev amd64 1.3.11+svn20110227.4616-5 [187 kB] Get:2483 http://deb.debian.org/debian bookworm/main amd64 libgetopt-complete-perl all 0.26-4 [51.4 kB] Get:2484 http://deb.debian.org/debian bookworm/main amd64 liblingua-en-inflect-perl all 1.905-2 [52.7 kB] Get:2485 http://deb.debian.org/debian bookworm/main amd64 libossp-uuid16 amd64 1.6.2-1.5+b11 [37.1 kB] Get:2486 http://deb.debian.org/debian bookworm/main amd64 libossp-uuid-perl amd64 1.6.2-1.5+b11 [26.4 kB] Get:2487 http://deb.debian.org/debian bookworm/main amd64 libhash-multivalue-perl all 0.16-3 [13.6 kB] Get:2488 http://deb.debian.org/debian bookworm/main amd64 libhttp-multipartparser-perl all 0.02-3 [10.1 kB] Get:2489 http://deb.debian.org/debian bookworm/main amd64 libtypes-serialiser-perl all 1.01-1 [12.2 kB] Get:2490 http://deb.debian.org/debian bookworm/main amd64 libjson-xs-perl amd64 4.030-2+b1 [92.1 kB] Get:2491 http://deb.debian.org/debian bookworm/main amd64 libjson-maybexs-perl all 1.004004-1 [13.3 kB] Get:2492 http://deb.debian.org/debian bookworm/main amd64 libstream-buffered-perl all 0.03-3 [5728 B] Get:2493 http://deb.debian.org/debian bookworm/main amd64 libwww-form-urlencoded-perl all 0.26-2 [13.2 kB] Get:2494 http://deb.debian.org/debian bookworm/main amd64 libhttp-entity-parser-perl all 0.25-2 [21.2 kB] Get:2495 http://deb.debian.org/debian bookworm/main amd64 libhttp-headers-fast-perl all 0.22-3 [12.2 kB] Get:2496 http://deb.debian.org/debian bookworm/main amd64 libtest-sharedfork-perl all 0.35-3 [8484 B] Get:2497 http://deb.debian.org/debian bookworm/main amd64 libtest-tcp-perl all 2.22-2 [22.9 kB] Get:2498 http://deb.debian.org/debian bookworm/main amd64 libplack-perl all 1.0050-1 [257 kB] Get:2499 http://deb.debian.org/debian bookworm/main amd64 libtest-fork-perl all 0.02-4 [7512 B] Get:2500 http://deb.debian.org/debian bookworm/main amd64 libur-perl all 0.470+ds-2 [1386 kB] Get:2501 http://deb.debian.org/debian bookworm/main amd64 libgenome-perl all 0.06-7 [39.4 kB] Get:2502 http://deb.debian.org/debian bookworm/main amd64 libstatistics-distributions-perl all 1.02-1.1 [9504 B] Get:2503 http://deb.debian.org/debian bookworm/main amd64 libtext-csv-xs-perl amd64 1.49-1 [129 kB] Get:2504 http://deb.debian.org/debian bookworm/main amd64 libgenome-model-tools-music-perl all 0.04-5 [155 kB] Get:2505 http://deb.debian.org/debian bookworm/main amd64 libgenometools0-dev amd64 1.6.2+ds-3 [94.5 kB] Get:2506 http://deb.debian.org/debian bookworm/main amd64 libgetopt-long-descriptive-perl all 0.111-1 [27.8 kB] Get:2507 http://deb.debian.org/debian bookworm/main amd64 libgff-dev amd64 2.0.0-3 [154 kB] Get:2508 http://deb.debian.org/debian bookworm/main amd64 libgflags-dev amd64 2.2.2-2 [100 kB] Get:2509 http://deb.debian.org/debian bookworm/main amd64 libhttp-parser2.9 amd64 2.9.4-5 [22.0 kB] Get:2510 http://deb.debian.org/debian bookworm/main amd64 libgit2-1.5 amd64 1.5.1+ds-1 [503 kB] Get:2511 http://deb.debian.org/debian bookworm/main amd64 libgkarrays-dev amd64 2.1.0+dfsg-4 [85.2 kB] Get:2512 http://deb.debian.org/debian bookworm/main amd64 libgkl-jni amd64 0.8.10+dfsg-3 [225 kB] Get:2513 http://deb.debian.org/debian bookworm/main amd64 libglvnd-core-dev amd64 1.6.0-1 [12.9 kB] Get:2514 http://deb.debian.org/debian bookworm/main amd64 libgles1 amd64 1.6.0-1 [11.7 kB] Get:2515 http://deb.debian.org/debian bookworm/main amd64 libgles-dev amd64 1.6.0-1 [50.4 kB] Get:2516 http://deb.debian.org/debian bookworm/main amd64 libglvnd-dev amd64 1.6.0-1 [4692 B] Get:2517 http://deb.debian.org/debian bookworm/main amd64 libgl1-mesa-dev amd64 22.3.6-1+deb12u1 [14.5 kB] Get:2518 http://deb.debian.org/debian bookworm/main amd64 libgl2ps1.4 amd64 1.4.2+dfsg1-2 [41.3 kB] Get:2519 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-data all 2.74.6-2 [1207 kB] Get:2520 http://deb.debian.org/debian bookworm/main amd64 libhiredis0.14 amd64 0.14.1-3 [35.9 kB] Get:2521 http://deb.debian.org/debian bookworm/main amd64 libgloo0 amd64 0.0~git20220518.5b14351-3 [164 kB] Get:2522 http://deb.debian.org/debian bookworm/main amd64 libglut3.12 amd64 3.4.0-1 [139 kB] Get:2523 http://deb.debian.org/debian bookworm/main amd64 libice-dev amd64 2:1.0.10-1 [67.1 kB] Get:2524 http://deb.debian.org/debian bookworm/main amd64 libsm-dev amd64 2:1.2.3-1 [38.0 kB] Get:2525 http://deb.debian.org/debian bookworm/main amd64 libxt-dev amd64 1:1.2.1-1.1 [405 kB] Get:2526 http://deb.debian.org/debian bookworm/main amd64 libglut-dev amd64 3.4.0-1 [163 kB] Get:2527 http://deb.debian.org/debian bookworm/main amd64 libgmpxx4ldbl amd64 2:6.2.1+dfsg1-1.1 [338 kB] Get:2528 http://deb.debian.org/debian bookworm/main amd64 liblzma-dev amd64 5.4.1-0.2 [260 kB] Get:2529 http://deb.debian.org/debian bookworm/main amd64 libunwind-dev amd64 1.6.2-3 [441 kB] Get:2530 http://deb.debian.org/debian bookworm/main amd64 libgoogle-glog-dev amd64 0.6.0-2 [100 kB] Get:2531 http://deb.debian.org/debian bookworm/main amd64 libjcsp-java all 1.1-rc4-2.1 [424 kB] Get:2532 http://deb.debian.org/debian bookworm/main amd64 libjsr166y-java all 1.7.0-2.1 [611 kB] Get:2533 http://deb.debian.org/debian bookworm/main amd64 libmultiverse-core-java all 0.7.0-6 [221 kB] Get:2534 http://deb.debian.org/debian bookworm/main amd64 libgpars-groovy-java all 1.2.1-11 [1119 kB] Get:2535 http://deb.debian.org/debian bookworm/main amd64 libgphoto2-port12 amd64 2.5.30-1 [135 kB] Get:2536 http://deb.debian.org/debian bookworm/main amd64 libgphoto2-6 amd64 2.5.30-1 [751 kB] Get:2537 http://deb.debian.org/debian bookworm/main amd64 libgphoto2-l10n all 2.5.30-1 [514 kB] Get:2538 http://deb.debian.org/debian bookworm/main amd64 libparse-yapp-perl all 1.21-3 [42.5 kB] Get:2539 http://deb.debian.org/debian bookworm/main amd64 libgraph-readwrite-perl all 2.10-1 [45.2 kB] Get:2540 http://deb.debian.org/debian bookworm/main amd64 libwmflite-0.2-7 amd64 0.2.12-5.1 [75.2 kB] Get:2541 http://deb.debian.org/debian bookworm/main amd64 libgraphicsmagick-q16-3 amd64 1.4+really1.3.40-4 [1180 kB] Get:2542 http://deb.debian.org/debian bookworm/main amd64 libgraphicsmagick++-q16-12 amd64 1.4+really1.3.40-4 [115 kB] Get:2543 http://deb.debian.org/debian bookworm/main amd64 libgsl-dev amd64 2.7.1+dfsg-5 [1152 kB] Get:2544 http://deb.debian.org/debian bookworm/main amd64 libgtk-3-bin amd64 3.24.38-2~deb12u1 [82.6 kB] Get:2545 http://deb.debian.org/debian bookworm/main amd64 libgtk2.0-bin amd64 2.24.33-2 [50.7 kB] Get:2546 http://deb.debian.org/debian bookworm/main amd64 libgts-bin amd64 0.7.6+darcs121130-5+b1 [50.3 kB] Get:2547 http://deb.debian.org/debian bookworm/main amd64 libguard-perl amd64 1.023-2+b1 [15.1 kB] Get:2548 http://deb.debian.org/debian bookworm/main amd64 libgumbo1 amd64 0.10.1+dfsg-5 [109 kB] Get:2549 http://deb.debian.org/debian bookworm/main amd64 libhandy-1-0 amd64 1.8.1-1 [321 kB] Get:2550 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz-icu0 amd64 6.0.0+dfsg-3 [1557 kB] Get:2551 http://deb.debian.org/debian bookworm/main amd64 libhdf5-openmpi-103-1 amd64 1.10.8+repack1-1 [1279 kB] Get:2552 http://deb.debian.org/debian bookworm/main amd64 libhmsbeagle-dev amd64 3.1.2+dfsg-13 [261 kB] Get:2553 http://deb.debian.org/debian bookworm/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:2554 http://deb.debian.org/debian bookworm/main amd64 libhtml-format-perl all 2.16-2 [38.8 kB] Get:2555 http://deb.debian.org/debian bookworm/main amd64 libhtml-tableextract-perl all 2.15-2 [30.6 kB] Get:2556 http://deb.debian.org/debian bookworm/main amd64 libhts-dev amd64 1.16+ds-3 [1601 kB] Get:2557 http://deb.debian.org/debian bookworm/main amd64 libhtscodecs-dev amd64 1.3.0-4 [2866 kB] Get:2558 http://deb.debian.org/debian bookworm/main amd64 libnuma-dev amd64 2.0.16-1 [35.0 kB] Get:2559 http://deb.debian.org/debian bookworm/main amd64 libltdl-dev amd64 2.4.7-5 [164 kB] Get:2560 http://deb.debian.org/debian bookworm/main amd64 libhwloc-dev amd64 2.9.0-1 [241 kB] Get:2561 http://deb.debian.org/debian bookworm/main amd64 libptscotch-7.0 amd64 7.0.3-2 [668 kB] Get:2562 http://deb.debian.org/debian bookworm/main amd64 libsuperlu-dist8 amd64 8.1.2+dfsg1-1+b1 [595 kB] Get:2563 http://deb.debian.org/debian bookworm/main amd64 libhypre-2.26.0 amd64 2.26.0-3 [1603 kB] Get:2564 http://deb.debian.org/debian bookworm/main amd64 libnl-3-dev amd64 3.7.0-0.2+b1 [104 kB] Get:2565 http://deb.debian.org/debian bookworm/main amd64 libnl-route-3-dev amd64 3.7.0-0.2+b1 [203 kB] Get:2566 http://deb.debian.org/debian bookworm/main amd64 libibverbs-dev amd64 44.0-2 [633 kB] Get:2567 http://deb.debian.org/debian bookworm/main amd64 libstring-crc32-perl amd64 2.100-2 [9968 B] Get:2568 http://deb.debian.org/debian bookworm/main amd64 libipc-shareable-perl all 1.13-1 [40.6 kB] Get:2569 http://deb.debian.org/debian bookworm/main amd64 libisospec++2 amd64 2.2.1-1+b1 [66.1 kB] Get:2570 http://deb.debian.org/debian bookworm/main amd64 libjavascriptcoregtk-4.1-0 amd64 2.42.2-1~deb12u1 [7529 kB] Get:2571 http://deb.debian.org/debian bookworm/main amd64 libjbcrypt-java all 0.4-3 [17.4 kB] Get:2572 http://deb.debian.org/debian bookworm/main amd64 libjcode-pm-perl amd64 2.06-1.1 [30.0 kB] Get:2573 http://deb.debian.org/debian bookworm/main amd64 libjcommander-java all 1.71-4 [73.0 kB] Get:2574 http://deb.debian.org/debian bookworm/main amd64 libjim0.81 amd64 0.81+dfsg0-2 [127 kB] Get:2575 http://deb.debian.org/debian bookworm/main amd64 libvectorgraphics2d-java all 0.13-3 [107 kB] Get:2576 http://deb.debian.org/debian bookworm/main amd64 libjloda-java all 2.1-2 [1377 kB] Get:2577 http://deb.debian.org/debian bookworm/main amd64 libjs-angularjs all 1.8.3-1 [817 kB] Get:2578 http://deb.debian.org/debian bookworm/main amd64 libjs-bootswatch all 3.3.7+dfsg2-1.1 [133 kB] Get:2579 http://deb.debian.org/debian bookworm/main amd64 libjs-filesaver all 2.0.4+dfsg+~2.0.5-2 [9776 B] Get:2580 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B] Get:2581 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-metadata all 12-4 [6532 B] Get:2582 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [184 kB] Get:2583 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB] Get:2584 http://deb.debian.org/debian bookworm/main amd64 libjs-lunr all 2.3.9~dfsg-2 [76.6 kB] Get:2585 http://deb.debian.org/debian bookworm/main amd64 libjs-remark-slide all 0.15.0+ds-2 [855 kB] Get:2586 http://deb.debian.org/debian bookworm/main amd64 libjs-sizzle all 2.3.6+ds+~2.3.3-2 [31.6 kB] Get:2587 http://deb.debian.org/debian bookworm/main amd64 libjsoncpp-dev amd64 1.9.5-4 [26.4 kB] Get:2588 http://deb.debian.org/debian bookworm/main amd64 libjxr0 amd64 1.2~git20170615.f752187-5 [162 kB] Get:2589 http://deb.debian.org/debian bookworm/main amd64 libjxr-tools amd64 1.2~git20170615.f752187-5 [17.3 kB] Get:2590 http://deb.debian.org/debian bookworm/main amd64 libklu1 amd64 1:5.12.0+dfsg-2 [87.9 kB] Get:2591 http://deb.debian.org/debian bookworm/main amd64 libmeryl-dev amd64 0~20150903+r2013-8+b3 [53.4 kB] Get:2592 http://deb.debian.org/debian bookworm/main amd64 libkmer-dev amd64 0~20150903+r2013-8+b3 [198 kB] Get:2593 http://deb.debian.org/debian bookworm/main amd64 liblapack-dev amd64 3.11.0-2 [4631 kB] Get:2594 http://deb.debian.org/debian bookworm/main amd64 libldap-common all 2.5.13+dfsg-5 [29.3 kB] Get:2595 http://deb.debian.org/debian bookworm/main amd64 liblept5 amd64 1.82.0-3+b3 [1050 kB] Get:2596 http://deb.debian.org/debian bookworm/main amd64 libleveldb1d amd64 1.23-4 [132 kB] Get:2597 http://deb.debian.org/debian bookworm/main amd64 liblist-someutils-xs-perl amd64 0.58-3 [34.5 kB] Get:2598 http://deb.debian.org/debian bookworm/main amd64 liblog-dispatch-perl all 2.70-1 [78.4 kB] Get:2599 http://deb.debian.org/debian bookworm/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:2600 http://deb.debian.org/debian bookworm/main amd64 libmagick++-6.q16-8 amd64 8:6.9.11.60+dfsg-1.6 [244 kB] Get:2601 http://deb.debian.org/debian bookworm/main amd64 libmagickcore-6.q16-6-extra amd64 8:6.9.11.60+dfsg-1.6 [172 kB] Get:2602 http://deb.debian.org/debian bookworm/main amd64 libsys-hostname-long-perl all 1.5-3 [11.6 kB] Get:2603 http://deb.debian.org/debian bookworm/main amd64 libmail-sendmail-perl all 0.80-3 [24.3 kB] Get:2604 http://deb.debian.org/debian bookworm/main amd64 libmanette-0.2-0 amd64 0.2.6-3+b1 [28.4 kB] Get:2605 http://deb.debian.org/debian bookworm/main amd64 libmariadb-java all 2.7.6-1 [601 kB] Get:2606 http://deb.debian.org/debian bookworm/main amd64 libmath-cephes-perl amd64 0.5305-6+b1 [178 kB] Get:2607 http://deb.debian.org/debian bookworm/main amd64 libmath-derivative-perl all 1.01-3 [8060 B] Get:2608 http://deb.debian.org/debian bookworm/main amd64 libmath-matrixreal-perl all 2.13-2 [68.6 kB] Get:2609 http://deb.debian.org/debian bookworm/main amd64 libmath-spline-perl all 0.02-4 [6808 B] Get:2610 http://deb.debian.org/debian bookworm/main amd64 libmbim-glib4 amd64 1.28.2-1 [175 kB] Get:2611 http://deb.debian.org/debian bookworm/main amd64 libmbim-proxy amd64 1.28.2-1 [8632 B] Get:2612 http://deb.debian.org/debian bookworm/main amd64 libmbim-utils amd64 1.28.2-1 [66.4 kB] Get:2613 http://deb.debian.org/debian bookworm/main amd64 libmuscle1 amd64 3.7+4565-7 [252 kB] Get:2614 http://deb.debian.org/debian bookworm/main amd64 libmems1 amd64 1.6.0+4725-9+b1 [674 kB] Get:2615 http://deb.debian.org/debian bookworm/main amd64 libmuscle-dev amd64 3.7+4565-7 [306 kB] Get:2616 http://deb.debian.org/debian bookworm/main amd64 libmems-dev amd64 1.6.0+4725-9+b1 [970 kB] Get:2617 http://deb.debian.org/debian bookworm/main amd64 libmhash2 amd64 0.9.9.9-9 [94.2 kB] Get:2618 http://deb.debian.org/debian bookworm/main amd64 libmime-charset-perl all 1.013.1-2 [34.0 kB] Get:2619 http://deb.debian.org/debian bookworm/main amd64 libmime-lite-perl all 3.033-1 [72.7 kB] Get:2620 http://deb.debian.org/debian bookworm/main amd64 libmime-types-perl all 2.24-1 [67.6 kB] Get:2621 http://deb.debian.org/debian bookworm/main amd64 libminimap2-dev amd64 2.24+dfsg-3+b1 [128 kB] Get:2622 http://deb.debian.org/debian bookworm/main amd64 libminpack1 amd64 19961126+dfsg1-5 [24.1 kB] Get:2623 http://deb.debian.org/debian bookworm/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:2624 http://deb.debian.org/debian bookworm/main amd64 libopenmm7.7 amd64 7.7.0+dfsg-9+b1 [856 kB] Get:2625 http://deb.debian.org/debian bookworm/main amd64 libsimbody3.7 amd64 3.7+dfsg-3 [3230 kB] Get:2626 http://deb.debian.org/debian bookworm/main amd64 libsimtkmolmodel3.1 amd64 3.1.0-2 [676 kB] Get:2627 http://deb.debian.org/debian bookworm/main amd64 libmmb4.0 amd64 4.0.0+dfsg-2 [1154 kB] Get:2628 http://deb.debian.org/debian bookworm/main amd64 libmodhmm0 amd64 1.0+dfsg-5+b1 [80.9 kB] Get:2629 http://deb.debian.org/debian bookworm/main amd64 libmodule-refresh-perl all 0.18-2 [9152 B] Get:2630 http://deb.debian.org/debian bookworm/main amd64 libmodule-signature-perl all 0.88-2 [25.9 kB] Get:2631 http://deb.debian.org/debian bookworm/main amd64 libmoox-handlesvia-perl all 0.001009-2 [18.4 kB] Get:2632 http://deb.debian.org/debian bookworm/main amd64 libxrender-dev amd64 1:0.9.10-1.1 [41.1 kB] Get:2633 http://deb.debian.org/debian bookworm/main amd64 libxft-dev amd64 2.3.6-1 [80.3 kB] Get:2634 http://deb.debian.org/debian bookworm/main amd64 uil amd64 2.3.8-3 [38.8 kB] Get:2635 http://deb.debian.org/debian bookworm/main amd64 libmotif-dev amd64 2.3.8-3 [2478 kB] Get:2636 http://deb.debian.org/debian bookworm/main amd64 libmujs2 amd64 1.3.2-1 [110 kB] Get:2637 http://deb.debian.org/debian bookworm/main amd64 libscalapack-openmpi2.2 amd64 2.2.1-2+b1 [1554 kB] Get:2638 http://deb.debian.org/debian bookworm/main amd64 libmumps-5.5 amd64 5.5.1-1 [1828 kB] Get:2639 http://deb.debian.org/debian bookworm/main amd64 libnanoxml2-java all 2.2.3.dfsg-9 [62.6 kB] Get:2640 http://deb.debian.org/debian bookworm/main amd64 libncbi-wvdb3 amd64 3.0.2+dfsg-2 [1078 kB] Get:2641 http://deb.debian.org/debian bookworm/main amd64 libncbi-wvdb-dev amd64 3.0.2+dfsg-2 [1188 kB] Get:2642 http://deb.debian.org/debian bookworm/main amd64 libzstd-dev amd64 1.5.4+dfsg2-5 [354 kB] Get:2643 http://deb.debian.org/debian bookworm/main amd64 libncbi-vdb-dev amd64 3.0.2+dfsg-2 [1461 kB] Get:2644 http://deb.debian.org/debian bookworm/main amd64 libncbi6 amd64 6.1.20170106+dfsg1-10 [4082 kB] Get:2645 http://deb.debian.org/debian bookworm/main amd64 libncbi6-dev amd64 6.1.20170106+dfsg1-10 [5521 kB] Get:2646 http://deb.debian.org/debian bookworm/main amd64 libncl-dev amd64 2.1.21+git20210811.b1213a7-4 [578 kB] Get:2647 http://deb.debian.org/debian bookworm/main amd64 libncurses-dev amd64 6.4-4 [349 kB] Get:2648 http://deb.debian.org/debian bookworm/main amd64 libncurses5-dev amd64 6.4-4 [932 B] Get:2649 http://deb.debian.org/debian bookworm/main amd64 libnet-dbus-perl amd64 1.2.0-2 [177 kB] Get:2650 http://deb.debian.org/debian bookworm/main amd64 libnet-httpserver-perl all 1.1.1-4 [42.9 kB] Get:2651 http://deb.debian.org/debian bookworm/main amd64 libnet-libidn-perl amd64 0.12.ds-4+b1 [17.1 kB] Get:2652 http://deb.debian.org/debian bookworm/main amd64 libnetpbm11 amd64 2:11.01.00-2 [174 kB] Get:2653 http://deb.debian.org/debian bookworm/main amd64 libnewuoa-dev amd64 0.1.2-1 [7508 B] Get:2654 http://deb.debian.org/debian bookworm/main amd64 libngs-c++3 amd64 3.0.3+dfsg-6~deb12u1 [128 kB] Get:2655 http://deb.debian.org/debian bookworm/main amd64 libnhgri-blastall-perl all 0.66-4 [27.3 kB] Get:2656 http://deb.debian.org/debian bookworm/main amd64 libnl-genl-3-200 amd64 3.7.0-0.2+b1 [21.6 kB] Get:2657 http://deb.debian.org/debian bookworm/main amd64 node-xtend all 4.0.2-3 [3932 B] Get:2658 http://deb.debian.org/debian bookworm/main amd64 nodejs amd64 18.13.0+dfsg1-1 [304 kB] Get:2659 http://deb.debian.org/debian bookworm/main amd64 node-acorn all 8.8.1+ds+~cs25.17.7-2 [128 kB] Get:2660 http://deb.debian.org/debian bookworm/main amd64 node-cjs-module-lexer all 1.2.2+dfsg-5 [30.1 kB] Get:2661 http://deb.debian.org/debian bookworm/main amd64 node-busboy all 1.6.0+~cs2.6.0-2 [16.9 kB] Get:2662 http://deb.debian.org/debian bookworm/main amd64 node-undici all 5.15.0+dfsg1+~cs20.10.9.3-1+deb12u3 [284 kB] Get:2663 http://deb.debian.org/debian bookworm/main amd64 libnode108 amd64 18.13.0+dfsg1-1 [10.3 MB] Get:2664 http://deb.debian.org/debian bookworm/main amd64 libnss-mdns amd64 0.15.1-3 [20.6 kB] Get:2665 http://deb.debian.org/debian bookworm/main amd64 libole-storage-lite-perl all 0.20-2 [21.9 kB] Get:2666 http://deb.debian.org/debian bookworm/main amd64 libonnx1 amd64 1.12.0-2+b4 [968 kB] Get:2667 http://deb.debian.org/debian bookworm/main amd64 libopencv-core406 amd64 4.6.0+dfsg-12 [1086 kB] Get:2668 http://deb.debian.org/debian bookworm/main amd64 libopencv-flann406 amd64 4.6.0+dfsg-12 [125 kB] Get:2669 http://deb.debian.org/debian bookworm/main amd64 libopencv-imgproc406 amd64 4.6.0+dfsg-12 [1346 kB] Get:2670 http://deb.debian.org/debian bookworm/main amd64 libopencv-features2d406 amd64 4.6.0+dfsg-12 [261 kB] Get:2671 http://deb.debian.org/debian bookworm/main amd64 libopencv-calib3d406 amd64 4.6.0+dfsg-12 [677 kB] Get:2672 http://deb.debian.org/debian bookworm/main amd64 libopencv-dnn406 amd64 4.6.0+dfsg-12 [1141 kB] Get:2673 http://deb.debian.org/debian bookworm/main amd64 libopencv-highgui406 amd64 4.6.0+dfsg-12 [124 kB] Get:2674 http://deb.debian.org/debian bookworm/main amd64 libopencv-imgcodecs406 amd64 4.6.0+dfsg-12 [129 kB] Get:2675 http://deb.debian.org/debian bookworm/main amd64 libopencv-ml406 amd64 4.6.0+dfsg-12 [195 kB] Get:2676 http://deb.debian.org/debian bookworm/main amd64 libopencv-objdetect406 amd64 4.6.0+dfsg-12 [187 kB] Get:2677 http://deb.debian.org/debian bookworm/main amd64 libopencv-video406 amd64 4.6.0+dfsg-12 [175 kB] Get:2678 http://deb.debian.org/debian bookworm/main amd64 libtesseract5 amd64 5.3.0-2 [1279 kB] Get:2679 http://deb.debian.org/debian bookworm/main amd64 libopencv-contrib406 amd64 4.6.0+dfsg-12 [3784 kB] Get:2680 http://deb.debian.org/debian bookworm/main amd64 libopencv-videoio406 amd64 4.6.0+dfsg-12 [225 kB] Get:2681 http://deb.debian.org/debian bookworm/main amd64 libopenmm-dev amd64 7.7.0+dfsg-9+b1 [327 kB] Get:2682 http://deb.debian.org/debian bookworm/main amd64 libpmix-dev amd64 4.2.2-1+deb12u1 [902 kB] Get:2683 http://deb.debian.org/debian bookworm/main amd64 libopenmpi-dev amd64 4.1.4-3+b1 [970 kB] Get:2684 http://deb.debian.org/debian bookworm/main amd64 libwildmagic-common all 5.17+cleaned1-6 [7018 kB] Get:2685 http://deb.debian.org/debian bookworm/main amd64 libwildmagic5 amd64 5.17+cleaned1-6 [1556 kB] Get:2686 http://deb.debian.org/debian bookworm/main amd64 openms-common all 2.6.0+cleaned1-3 [4294 kB] Get:2687 http://deb.debian.org/debian bookworm/main amd64 libopenms2.6.0 amd64 2.6.0+cleaned1-3+b4 [8003 kB] Get:2688 http://deb.debian.org/debian bookworm/main amd64 libopenms-dev amd64 2.6.0+cleaned1-3+b4 [880 kB] Get:2689 http://deb.debian.org/debian bookworm/main amd64 libpam-cap amd64 1:2.66-4 [14.5 kB] Get:2690 http://deb.debian.org/debian bookworm/main amd64 libpwizlite3 amd64 3.0.4-1 [833 kB] Get:2691 http://deb.debian.org/debian bookworm/main amd64 libqt6concurrent6 amd64 6.4.2+dfsg-10 [37.0 kB] Get:2692 http://deb.debian.org/debian bookworm/main amd64 libqt6sql6 amd64 6.4.2+dfsg-10 [133 kB] Get:2693 http://deb.debian.org/debian bookworm/main amd64 libqt6svg6 amd64 6.4.2-2 [144 kB] Get:2694 http://deb.debian.org/debian bookworm/main amd64 libqt6xml6 amd64 6.4.2+dfsg-10 [75.5 kB] Get:2695 http://deb.debian.org/debian bookworm/main amd64 libpappsomspp0-qt6 amd64 0.9.6-1 [667 kB] Get:2696 http://deb.debian.org/debian bookworm/main amd64 libqcustomplot2.1-qt6 amd64 2.1.0+dfsg1-3.1 [444 kB] Get:2697 http://deb.debian.org/debian bookworm/main amd64 libpappsomspp-widget0-qt6 amd64 0.9.6-1 [124 kB] Get:2698 http://deb.debian.org/debian bookworm/main amd64 libparallel-forkmanager-perl all 2.02-1 [30.4 kB] Get:2699 http://deb.debian.org/debian bookworm/main amd64 libparasail8 amd64 2.6+dfsg-1 [1878 kB] Get:2700 http://deb.debian.org/debian bookworm/main amd64 libparasail-dev amd64 2.6+dfsg-1 [1495 kB] Get:2701 http://deb.debian.org/debian bookworm/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:2702 http://deb.debian.org/debian bookworm/main amd64 libpbbam-dev amd64 2.1.0+dfsg-2 [88.8 kB] Get:2703 http://deb.debian.org/debian bookworm/main amd64 libpbihdf-dev amd64 5.3.5+dfsg-4+b2 [48.0 kB] Get:2704 http://deb.debian.org/debian bookworm/main amd64 libpbseq-dev amd64 5.3.5+dfsg-4+b2 [5784 B] Get:2705 http://deb.debian.org/debian bookworm/main amd64 libpcg-cpp-dev all 0.98.1-2 [21.3 kB] Get:2706 http://deb.debian.org/debian bookworm/main amd64 libpcre16-3 amd64 2:8.39-15 [257 kB] Get:2707 http://deb.debian.org/debian bookworm/main amd64 libpcre2-posix3 amd64 10.42-1 [55.4 kB] Get:2708 http://deb.debian.org/debian bookworm/main amd64 libpcre2-dev amd64 10.42-1 [753 kB] Get:2709 http://deb.debian.org/debian bookworm/main amd64 libpcre32-3 amd64 2:8.39-15 [248 kB] Get:2710 http://deb.debian.org/debian bookworm/main amd64 libpcrecpp0v5 amd64 2:8.39-15 [143 kB] Get:2711 http://deb.debian.org/debian bookworm/main amd64 libpcre3-dev amd64 2:8.39-15 [653 kB] Get:2712 http://deb.debian.org/debian bookworm/main amd64 libpdb-redo-dev amd64 3.0.5-2 [627 kB] Get:2713 http://deb.debian.org/debian bookworm/main amd64 libpdfbox-java all 1:1.8.16-2 [5205 kB] Get:2714 http://deb.debian.org/debian bookworm/main amd64 libperl4-corelibs-perl all 0.004-3 [38.5 kB] Get:2715 http://deb.debian.org/debian bookworm/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:2716 http://deb.debian.org/debian bookworm/main amd64 libscotch-7.0 amd64 7.0.3-2 [407 kB] Get:2717 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-kokkos-13.2 amd64 13.2.0-4 [105 kB] Get:2718 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-teuchos-13.2 amd64 13.2.0-4 [1257 kB] Get:2719 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-epetra-13.2 amd64 13.2.0-4 [441 kB] Get:2720 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-triutils-13.2 amd64 13.2.0-4 [124 kB] Get:2721 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-epetraext-13.2 amd64 13.2.0-4 [443 kB] Get:2722 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-trilinosss-13.2 amd64 13.2.0-4 [88.1 kB] Get:2723 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-amesos-13.2 amd64 13.2.0-4 [117 kB] Get:2724 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-aztecoo-13.2 amd64 13.2.0-4 [210 kB] Get:2725 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-galeri-13.2 amd64 13.2.0-4 [93.5 kB] Get:2726 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-ifpack-13.2 amd64 13.2.0-4 [486 kB] Get:2727 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-zoltan-13.2 amd64 13.2.0-4 [384 kB] Get:2728 http://deb.debian.org/debian bookworm/main amd64 libtrilinos-ml-13.2 amd64 13.2.0-4 [988 kB] Get:2729 http://deb.debian.org/debian bookworm/main amd64 libpetsc-real3.18 amd64 3.18.5+dfsg1-1 [6699 kB] Get:2730 http://deb.debian.org/debian bookworm/main amd64 libpfm4 amd64 4.13.0-1 [294 kB] Get:2731 http://deb.debian.org/debian bookworm/main amd64 libphobos2-ldc-shared100 amd64 1:1.30.0-1+b1 [1281 kB] Get:2732 http://deb.debian.org/debian bookworm/main amd64 libspa-0.2-modules amd64 0.3.65-3+deb12u1 [542 kB] Get:2733 http://deb.debian.org/debian bookworm/main amd64 libpipewire-0.3-0 amd64 0.3.65-3+deb12u1 [243 kB] Get:2734 http://deb.debian.org/debian bookworm/main amd64 libpipewire-0.3-common all 0.3.65-3+deb12u1 [72.0 kB] Get:2735 http://deb.debian.org/debian bookworm/main amd64 libpll0 amd64 0.3.2-4 [165 kB] Get:2736 http://deb.debian.org/debian bookworm/main amd64 libpll-dev amd64 0.3.2-4 [183 kB] Get:2737 http://deb.debian.org/debian bookworm/main amd64 libplot2c2 amd64 2.6-13 [512 kB] Get:2738 http://deb.debian.org/debian bookworm/main amd64 libpng-tools amd64 1.6.39-2 [127 kB] Get:2739 http://deb.debian.org/debian bookworm/main amd64 libpod-coverage-perl all 0.23-2 [22.1 kB] Get:2740 http://deb.debian.org/debian bookworm/main amd64 libpod-markdown-perl all 3.300000-2 [32.7 kB] Get:2741 http://deb.debian.org/debian bookworm/main amd64 libpod-readme-perl all 1.2.3-1 [37.0 kB] Get:2742 http://deb.debian.org/debian bookworm/main amd64 libpolkit-gobject-1-0 amd64 122-3 [43.9 kB] Get:2743 http://deb.debian.org/debian bookworm/main amd64 libpolkit-agent-1-0 amd64 122-3 [24.4 kB] Get:2744 http://deb.debian.org/debian bookworm/main amd64 libpoppler-cpp0v5 amd64 22.12.0-2+b1 [41.7 kB] Get:2745 http://deb.debian.org/debian bookworm/main amd64 libpopt0 amd64 1.19+dfsg-1 [43.3 kB] Get:2746 http://deb.debian.org/debian bookworm/main amd64 libportaudio2 amd64 19.6.0-1.2 [66.7 kB] Get:2747 http://deb.debian.org/debian bookworm/main amd64 libpostscript-perl all 0.06-3.1 [26.0 kB] Get:2748 http://deb.debian.org/debian bookworm/main amd64 libprocessing-core-java all 1.2.1-2 [185 kB] Get:2749 http://deb.debian.org/debian bookworm/main amd64 libprotobuf-lite32 amd64 3.21.12-3 [261 kB] Get:2750 http://deb.debian.org/debian bookworm/main amd64 libprotobuf-dev amd64 3.21.12-3 [1283 kB] Get:2751 http://deb.debian.org/debian bookworm/main amd64 libzip4 amd64 1.7.3-1+b1 [55.5 kB] Get:2752 http://deb.debian.org/debian bookworm/main amd64 libpstoedit0c2a amd64 3.78-2 [410 kB] Get:2753 http://deb.debian.org/debian bookworm/main amd64 libpthreadpool0 amd64 0.0~git20210507.1787867-1 [29.5 kB] Get:2754 http://deb.debian.org/debian bookworm/main amd64 libpwiz3 amd64 3.0.18342-4+b1 [3041 kB] Get:2755 http://deb.debian.org/debian bookworm/main amd64 libpwiz-dev amd64 3.0.18342-4+b1 [4965 kB] Get:2756 http://deb.debian.org/debian bookworm/main amd64 libpwiz-tools amd64 3.0.18342-4+b1 [121 kB] Get:2757 http://deb.debian.org/debian bookworm/main amd64 libqes-dev amd64 0.2.8+ds-1 [25.4 kB] Get:2758 http://deb.debian.org/debian bookworm/main amd64 libqrtr-glib0 amd64 1.2.2-1 [16.6 kB] Get:2759 http://deb.debian.org/debian bookworm/main amd64 libqmi-glib5 amd64 1.32.2-1 [715 kB] Get:2760 http://deb.debian.org/debian bookworm/main amd64 libqmi-proxy amd64 1.32.2-1 [9312 B] Get:2761 http://deb.debian.org/debian bookworm/main amd64 libqmi-utils amd64 1.32.2-1 [189 kB] Get:2762 http://deb.debian.org/debian bookworm/main amd64 libqpdf29 amd64 11.3.0-1+deb12u1 [867 kB] Get:2763 http://deb.debian.org/debian bookworm/main amd64 libqrupdate1 amd64 1.1.2-4 [37.8 kB] Get:2764 http://deb.debian.org/debian bookworm/main amd64 libqscintilla2-qt5-l10n all 2.13.3+dfsg-3 [103 kB] Get:2765 http://deb.debian.org/debian bookworm/main amd64 libqscintilla2-qt5-15 amd64 2.13.3+dfsg-3 [1094 kB] Get:2766 http://deb.debian.org/debian bookworm/main amd64 libqt5charts5 amd64 5.15.8-2 [444 kB] Get:2767 http://deb.debian.org/debian bookworm/main amd64 libqt5designer5 amd64 5.15.8-2 [2748 kB] Get:2768 http://deb.debian.org/debian bookworm/main amd64 libqt5help5 amd64 5.15.8-2 [149 kB] Get:2769 http://deb.debian.org/debian bookworm/main amd64 libqt5positioningquick5 amd64 5.15.8+dfsg-3+deb12u1 [42.8 kB] Get:2770 http://deb.debian.org/debian bookworm/main amd64 libqt5location5 amd64 5.15.8+dfsg-3+deb12u1 [681 kB] Get:2771 http://deb.debian.org/debian bookworm/main amd64 libqt5multimedia5 amd64 5.15.8-2 [283 kB] Get:2772 http://deb.debian.org/debian bookworm/main amd64 libqt5multimediawidgets5 amd64 5.15.8-2 [39.0 kB] Get:2773 http://deb.debian.org/debian bookworm/main amd64 libqt5opengl5-dev amd64 5.15.8+dfsg-11 [49.1 kB] Get:2774 http://deb.debian.org/debian bookworm/main amd64 libqt5remoteobjects5 amd64 5.15.8-2 [206 kB] Get:2775 http://deb.debian.org/debian bookworm/main amd64 libqt5serialport5 amd64 5.15.8-2 [32.2 kB] Get:2776 http://deb.debian.org/debian bookworm/main amd64 libqt5sql5-sqlite amd64 5.15.8+dfsg-11 [56.7 kB] Get:2777 http://deb.debian.org/debian bookworm/main amd64 libqt5texttospeech5 amd64 5.15.8-2 [19.6 kB] Get:2778 http://deb.debian.org/debian bookworm/main amd64 libqt5waylandclient5 amd64 5.15.8-2 [370 kB] Get:2779 http://deb.debian.org/debian bookworm/main amd64 libqt5waylandcompositor5 amd64 5.15.8-2 [354 kB] Get:2780 http://deb.debian.org/debian bookworm/main amd64 libqt5webengine5 amd64 5.15.13+dfsg-1~deb12u1 [162 kB] Get:2781 http://deb.debian.org/debian bookworm/main amd64 libqt5websockets5 amd64 5.15.8-2 [60.8 kB] Get:2782 http://deb.debian.org/debian bookworm/main amd64 libqt5xmlpatterns5 amd64 5.15.8-2 [942 kB] Get:2783 http://deb.debian.org/debian bookworm/main amd64 libqt6network6 amd64 6.4.2+dfsg-10 [682 kB] Get:2784 http://deb.debian.org/debian bookworm/main amd64 libqt6sql6-sqlite amd64 6.4.2+dfsg-10 [59.0 kB] Get:2785 http://deb.debian.org/debian bookworm/main amd64 libqt6svgwidgets6 amd64 6.4.2-2 [17.2 kB] Get:2786 http://deb.debian.org/debian bookworm/main amd64 librasqal3 amd64 0.9.33-2 [191 kB] Get:2787 http://deb.debian.org/debian bookworm/main amd64 librcsb-core-wrapper0 amd64 1.005-11+b1 [291 kB] Get:2788 http://deb.debian.org/debian bookworm/main amd64 librcsb-core-wrapper0-dev amd64 1.005-11+b1 [355 kB] Get:2789 http://deb.debian.org/debian bookworm/main amd64 librdf0 amd64 1.0.17-3 [105 kB] Get:2790 http://deb.debian.org/debian bookworm/main amd64 librdkit1 amd64 202209.3-1 [4292 kB] Get:2791 http://deb.debian.org/debian bookworm/main amd64 librdp-taxonomy-tree-java all 1.2.0-6 [18.1 kB] Get:2792 http://deb.debian.org/debian bookworm/main amd64 libreadline-dev amd64 8.2-1.3 [151 kB] Get:2793 http://deb.debian.org/debian bookworm/main amd64 libref-util-perl all 0.204-2 [17.4 kB] Get:2794 http://deb.debian.org/debian bookworm/main amd64 libref-util-xs-perl amd64 0.117-2+b1 [14.1 kB] Get:2795 http://deb.debian.org/debian bookworm/main amd64 libregexp-java all 1.5-4 [37.1 kB] Get:2796 http://deb.debian.org/debian bookworm/main amd64 librostlab-blast0v5 amd64 1.0.1-13 [77.1 kB] Get:2797 http://deb.debian.org/debian bookworm/main amd64 librg-blast-parser-perl amd64 0.03-9+b1 [35.2 kB] Get:2798 http://deb.debian.org/debian bookworm/main amd64 librg-reprof-bundle-perl all 1.0.1-8 [7480 kB] Get:2799 http://deb.debian.org/debian bookworm/main amd64 profphd-utils amd64 1.0.10-7 [251 kB] Get:2800 http://deb.debian.org/debian bookworm/main amd64 librg-utils-perl all 1.0.43-8 [112 kB] Get:2801 http://deb.debian.org/debian bookworm/main amd64 librocksdb7.8 amd64 7.8.3-2 [3155 kB] Get:2802 http://deb.debian.org/debian bookworm/main amd64 librostlab3 amd64 1.0.20-12 [6508 B] Get:2803 http://deb.debian.org/debian bookworm/main amd64 librostlab3-dev amd64 1.0.20-12 [14.1 kB] Get:2804 http://deb.debian.org/debian bookworm/main amd64 librostlab-blast0-dev amd64 1.0.1-13 [91.7 kB] Get:2805 http://deb.debian.org/debian bookworm/main amd64 librpc-xml-perl all 0.82-1 [165 kB] Get:2806 http://deb.debian.org/debian bookworm/main amd64 librsvg2-common amd64 2.54.7+dfsg-1~deb12u1 [21.4 kB] Get:2807 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules amd64 2.1.28+dfsg-10 [66.6 kB] Get:2808 http://deb.debian.org/debian bookworm/main amd64 libsaxon-java all 1:6.5.5-13 [576 kB] Get:2809 http://deb.debian.org/debian bookworm/main amd64 libsbml5 amd64 5.19.7+dfsg-2 [2121 kB] Get:2810 http://deb.debian.org/debian bookworm/main amd64 libsbml5-dev amd64 5.19.7+dfsg-2 [3138 kB] Get:2811 http://deb.debian.org/debian bookworm/main amd64 libsundials-ida6 amd64 6.4.1+dfsg1-3 [145 kB] Get:2812 http://deb.debian.org/debian bookworm/main amd64 libsundials-nvecparallel-petsc6 amd64 6.4.1+dfsg1-3 [58.3 kB] Get:2813 http://deb.debian.org/debian bookworm/main amd64 libsundials-sunmatrix4 amd64 6.4.1+dfsg1-3 [103 kB] Get:2814 http://deb.debian.org/debian bookworm/main amd64 libsundials-sunlinsol3 amd64 6.4.1+dfsg1-3 [201 kB] Get:2815 http://deb.debian.org/debian bookworm/main amd64 libtext-unidecode-perl all 1.30-3 [101 kB] Get:2816 http://deb.debian.org/debian bookworm/main amd64 texinfo amd64 6.8-6+b1 [1816 kB] Get:2817 http://deb.debian.org/debian bookworm/main amd64 octave-common all 7.3.0-2 [6257 kB] Get:2818 http://deb.debian.org/debian bookworm/main amd64 octave amd64 7.3.0-2 [10.2 MB] Get:2819 http://deb.debian.org/debian bookworm/main amd64 libsbml5-octave amd64 5.19.7+dfsg-2 [163 kB] Get:2820 http://deb.debian.org/debian bookworm/main amd64 libsecret-common all 0.20.5-3 [28.5 kB] Get:2821 http://deb.debian.org/debian bookworm/main amd64 libsecret-1-0 amd64 0.20.5-3 [115 kB] Get:2822 http://deb.debian.org/debian bookworm/main amd64 libseqan2-dev all 2.4.0+dfsg-15 [1215 kB] Get:2823 http://deb.debian.org/debian bookworm/main amd64 libseqan3-dev all 3.2.0+ds-6 [752 kB] Get:2824 http://deb.debian.org/debian bookworm/main amd64 libssw-dev amd64 1.1-13 [22.4 kB] Get:2825 http://deb.debian.org/debian bookworm/main amd64 libseqlib-dev amd64 1.2.0+dfsg-9 [209 kB] Get:2826 http://deb.debian.org/debian bookworm/main amd64 libset-scalar-perl all 1.29-3 [32.1 kB] Get:2827 http://deb.debian.org/debian bookworm/main amd64 libsleef3 amd64 3.5.1-3 [731 kB] Get:2828 http://deb.debian.org/debian bookworm/main amd64 libslow5-0 amd64 0.7.0+dfsg-2+b1 [65.6 kB] Get:2829 http://deb.debian.org/debian bookworm/main amd64 libslow5-dev amd64 0.7.0+dfsg-2+b1 [80.4 kB] Get:2830 http://deb.debian.org/debian bookworm/main amd64 libsmithwaterman-dev amd64 0.0+git20160702.2610e25-12+b1 [40.8 kB] Get:2831 http://deb.debian.org/debian bookworm/main amd64 libsnp-sites1 amd64 2.5.1-2+b1 [15.4 kB] Get:2832 http://deb.debian.org/debian bookworm/main amd64 libsnp-sites1-dev amd64 2.5.1-2+b1 [18.5 kB] Get:2833 http://deb.debian.org/debian bookworm/main amd64 libtrove3-java all 3.0.3-5 [2146 kB] Get:2834 http://deb.debian.org/debian bookworm/main amd64 libsnpeff-java all 5.1+d+dfsg-3 [2150 kB] Get:2835 http://deb.debian.org/debian bookworm/main amd64 libsnpsift-java all 5.1+dfsg2-2 [308 kB] Get:2836 http://deb.debian.org/debian bookworm/main amd64 libtext-template-perl all 1.61-1 [54.4 kB] Get:2837 http://deb.debian.org/debian bookworm/main amd64 libsoftware-license-perl all 0.104002-1 [118 kB] Get:2838 http://deb.debian.org/debian bookworm/main amd64 libsombok3 amd64 2.4.0-2+b1 [31.4 kB] Get:2839 http://deb.debian.org/debian bookworm/main amd64 libsort-key-top-perl amd64 0.08-4+b2 [19.3 kB] Get:2840 http://deb.debian.org/debian bookworm/main amd64 libsort-naturally-perl all 1.03-4 [13.1 kB] Get:2841 http://deb.debian.org/debian bookworm/main amd64 libspeechd2 amd64 0.11.4-2 [20.3 kB] Get:2842 http://deb.debian.org/debian bookworm/main amd64 libspoa7.0.0 amd64 4.0.8-1 [68.4 kB] Get:2843 http://deb.debian.org/debian bookworm/main amd64 libspoa-dev amd64 4.0.8-1 [9356 B] Get:2844 http://deb.debian.org/debian bookworm/main amd64 libspreadsheet-writeexcel-perl all 2.40-4 [503 kB] Get:2845 http://deb.debian.org/debian bookworm/main amd64 libunicode-map-perl amd64 0.112-13+b1 [144 kB] Get:2846 http://deb.debian.org/debian bookworm/main amd64 libspreadsheet-parseexcel-perl all 0.6500-4~deb12u1 [126 kB] Get:2847 http://deb.debian.org/debian bookworm/main amd64 libsprng2 amd64 2.0a-13 [75.8 kB] Get:2848 http://deb.debian.org/debian bookworm/main amd64 libsquizz amd64 0.99d+dfsg-3 [269 kB] Get:2849 http://deb.debian.org/debian bookworm/main amd64 libsrf-dev amd64 0.1+dfsg-7 [17.2 kB] Get:2850 http://deb.debian.org/debian bookworm/main amd64 libssm2 amd64 1.4.0-2 [82.2 kB] Get:2851 http://deb.debian.org/debian bookworm/main amd64 libssm-dev amd64 1.4.0-2 [15.0 kB] Get:2852 http://deb.debian.org/debian bookworm/main amd64 libssu0 amd64 1.2-2 [111 kB] Get:2853 http://deb.debian.org/debian bookworm/main amd64 libssu-dev amd64 1.2-2 [8232 B] Get:2854 http://deb.debian.org/debian bookworm/main amd64 libstaden-read-dev amd64 1.14.15-1 [344 kB] Get:2855 http://deb.debian.org/debian bookworm/main amd64 libstatgen1 amd64 1.0.15-6 [317 kB] Get:2856 http://deb.debian.org/debian bookworm/main amd64 libstatgen-dev amd64 1.0.15-6 [122 kB] Get:2857 http://deb.debian.org/debian bookworm/main amd64 libunicode-linebreak-perl amd64 0.0.20190101-1+b5 [97.8 kB] Get:2858 http://deb.debian.org/debian bookworm/main amd64 libtext-simpletable-perl all 2.07-1 [12.3 kB] Get:2859 http://deb.debian.org/debian bookworm/main amd64 libstatistics-pca-perl all 0.0.1-2 [15.0 kB] Get:2860 http://deb.debian.org/debian bookworm/main amd64 libstreamvbyte0 amd64 0.4.1-4 [5692 B] Get:2861 http://deb.debian.org/debian bookworm/main amd64 libstringtemplate-java all 3.2.1-3 [112 kB] Get:2862 http://deb.debian.org/debian bookworm/main amd64 libsuma1 amd64 1.0.36-3+b1 [30.6 kB] Get:2863 http://deb.debian.org/debian bookworm/main amd64 libsvg-graph-perl all 0.02-4 [105 kB] Get:2864 http://deb.debian.org/debian bookworm/main amd64 libsvmloc0 amd64 1.0+dfsg-5+b1 [13.7 kB] Get:2865 http://deb.debian.org/debian bookworm/main amd64 libswiss-perl all 1.80-1 [776 kB] Get:2866 http://deb.debian.org/debian bookworm/main amd64 libtabixpp-dev amd64 1.1.2-1 [8936 B] Get:2867 http://deb.debian.org/debian bookworm/main amd64 libtbb-dev amd64 2021.8.0-2 [192 kB] Get:2868 http://deb.debian.org/debian bookworm/main amd64 libtcmalloc-minimal4 amd64 2.10-1 [93.4 kB] Get:2869 http://deb.debian.org/debian bookworm/main amd64 libtensorpipe0 amd64 0.0~git20220513.bb1473a-3 [537 kB] Get:2870 http://deb.debian.org/debian bookworm/main amd64 libterraces0 amd64 0.0+git20200413.8af2e4c+dfsg-2 [73.7 kB] Get:2871 http://deb.debian.org/debian bookworm/main amd64 libtest-file-perl all 1.993-1 [24.5 kB] Get:2872 http://deb.debian.org/debian bookworm/main amd64 libtest-files-perl all 0.15-1 [12.0 kB] Get:2873 http://deb.debian.org/debian bookworm/main amd64 libtest-output-perl all 1.033-2 [16.1 kB] Get:2874 http://deb.debian.org/debian bookworm/main amd64 libtest-pod-perl all 1.52-2 [12.9 kB] Get:2875 http://deb.debian.org/debian bookworm/main amd64 libtext-reform-perl all 1.20-5 [36.0 kB] Get:2876 http://deb.debian.org/debian bookworm/main amd64 libtext-autoformat-perl all 1.750000-2 [35.2 kB] Get:2877 http://deb.debian.org/debian bookworm/main amd64 libtext-charwidth-perl amd64 0.04-11 [9496 B] Get:2878 http://deb.debian.org/debian bookworm/main amd64 libtext-recordparser-perl all 1.6.5-4 [38.4 kB] Get:2879 http://deb.debian.org/debian bookworm/main amd64 libtext-tabulardisplay-perl all 1.38-3 [13.1 kB] Get:2880 http://deb.debian.org/debian bookworm/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:2881 http://deb.debian.org/debian bookworm/main amd64 libthread-pool-dev amd64 4.0.0-1 [7240 B] Get:2882 http://deb.debian.org/debian bookworm/main amd64 libtingea0 amd64 21-361-2 [50.7 kB] Get:2883 http://deb.debian.org/debian bookworm/main amd64 libxnnpack0 amd64 0.0~git20220216.ae108ef-2 [303 kB] Get:2884 http://deb.debian.org/debian bookworm/main amd64 libtorch1.13 amd64 1.13.1+dfsg-4 [29.2 MB] Get:2885 http://deb.debian.org/debian bookworm/main amd64 libtorch-dev amd64 1.13.1+dfsg-4 [2190 kB] Get:2886 http://deb.debian.org/debian bookworm/main amd64 libtorch-test amd64 1.13.1+dfsg-4 [6751 kB] Get:2887 http://deb.debian.org/debian bookworm/main amd64 libtype-tiny-xs-perl amd64 0.025-1 [26.4 kB] Get:2888 http://deb.debian.org/debian bookworm/main amd64 libudunits2-data all 2.2.28-5 [27.7 kB] Get:2889 http://deb.debian.org/debian bookworm/main amd64 libudunits2-0 amd64 2.2.28-5 [59.5 kB] Get:2890 http://deb.debian.org/debian bookworm/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:2891 http://deb.debian.org/debian bookworm/main amd64 libvbz-hdf-plugin0 amd64 1.0.2-2 [18.7 kB] Get:2892 http://deb.debian.org/debian bookworm/main amd64 libvbz-hdf-plugin-dev amd64 1.0.2-2 [14.7 kB] Get:2893 http://deb.debian.org/debian bookworm/main amd64 libvcflib-dev amd64 1.0.3+dfsg-2 [85.2 kB] Get:2894 http://deb.debian.org/debian bookworm/main amd64 r-cran-gridbase all 0.4-7-5 [163 kB] Get:2895 http://deb.debian.org/debian bookworm/main amd64 libvcflib-tools amd64 1.0.3+dfsg-2 [748 kB] Get:2896 http://deb.debian.org/debian bookworm/main amd64 libvdpau-va-gl1 amd64 0.4.2-1+b1 [71.3 kB] Get:2897 http://deb.debian.org/debian bookworm/main amd64 libvibrant6b amd64 6.1.20170106+dfsg1-10 [1315 kB] Get:2898 http://deb.debian.org/debian bookworm/main amd64 libxmu-headers all 2:1.1.3-3 [68.5 kB] Get:2899 http://deb.debian.org/debian bookworm/main amd64 libxmu-dev amd64 2:1.1.3-3 [65.9 kB] Get:2900 http://deb.debian.org/debian bookworm/main amd64 libvibrant6-dev amd64 6.1.20170106+dfsg1-10 [1551 kB] Get:2901 http://deb.debian.org/debian bookworm/main amd64 libvte-2.91-common amd64 0.70.6-2~deb12u1 [642 kB] Get:2902 http://deb.debian.org/debian bookworm/main amd64 libvte-2.91-0 amd64 0.70.6-2~deb12u1 [799 kB] Get:2903 http://deb.debian.org/debian bookworm/main amd64 libwcs7 amd64 7.12+ds-1+b2 [281 kB] Get:2904 http://deb.debian.org/debian bookworm/main amd64 xdg-dbus-proxy amd64 0.1.4-3 [23.2 kB] Get:2905 http://deb.debian.org/debian bookworm/main amd64 libwpe-1.0-1 amd64 1.14.0-1 [19.0 kB] Get:2906 http://deb.debian.org/debian bookworm/main amd64 libwpebackend-fdo-1.0-1 amd64 1.14.2-1 [33.6 kB] Get:2907 http://deb.debian.org/debian bookworm/main amd64 libwebkit2gtk-4.1-0 amd64 2.42.2-1~deb12u1 [20.3 MB] Get:2908 http://deb.debian.org/debian bookworm/main amd64 libwfa2-0 amd64 2.3.3-1 [59.7 kB] Get:2909 http://deb.debian.org/debian bookworm/main amd64 libwfa2-dev amd64 2.3.3-1 [78.5 kB] Get:2910 http://deb.debian.org/debian bookworm/main amd64 libwww-form-urlencoded-xs-perl amd64 0.28-1+b1 [13.1 kB] Get:2911 http://deb.debian.org/debian bookworm/main amd64 libwxgtk-gl3.2-1 amd64 3.2.2+dfsg-2 [77.7 kB] Get:2912 http://deb.debian.org/debian bookworm/main amd64 libx11-protocol-perl all 0.56-9 [120 kB] Get:2913 http://deb.debian.org/debian bookworm/main amd64 libxerial-sqlite-jdbc-jni amd64 3.40.1.0+dfsg-1+deb12u1 [16.5 kB] Get:2914 http://deb.debian.org/debian bookworm/main amd64 libxerial-sqlite-jdbc-java all 3.40.1.0+dfsg-1+deb12u1 [222 kB] Get:2915 http://deb.debian.org/debian bookworm/main amd64 libxml-checker-perl all 0.13-7 [40.6 kB] Get:2916 http://deb.debian.org/debian bookworm/main amd64 libxml-dumper-perl all 0.81-1.4 [21.2 kB] Get:2917 http://deb.debian.org/debian bookworm/main amd64 libxml-filter-buffertext-perl all 1.01-7 [7136 B] Get:2918 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-writer-perl all 0.57-2 [23.1 kB] Get:2919 http://deb.debian.org/debian bookworm/main amd64 libxml2-dev amd64 2.9.14+dfsg-1.3~deb12u1 [782 kB] Get:2920 http://deb.debian.org/debian bookworm/main amd64 libxmlrpc-lite-perl all 0.717-5 [22.4 kB] Get:2921 http://deb.debian.org/debian bookworm/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:2922 http://deb.debian.org/debian bookworm/main amd64 libyelp0 amd64 42.2-1 [169 kB] Get:2923 http://deb.debian.org/debian bookworm/main amd64 libz3-dev amd64 4.8.12-3.1 [90.6 kB] Get:2924 http://deb.debian.org/debian bookworm/main amd64 libzerg0 amd64 1.0.7-11 [21.0 kB] Get:2925 http://deb.debian.org/debian bookworm/main amd64 libzerg-perl amd64 1.0.4-8+b2 [18.9 kB] Get:2926 http://deb.debian.org/debian bookworm/main amd64 libzerg0-dev amd64 1.0.7-11 [23.0 kB] Get:2927 http://deb.debian.org/debian bookworm/main amd64 libzeus-jscl-java all 1.72-2 [129 kB] Get:2928 http://deb.debian.org/debian bookworm/main amd64 lighter amd64 1.1.2-7 [47.4 kB] Get:2929 http://deb.debian.org/debian bookworm/main amd64 llvm-14-runtime amd64 1:14.0.6-12 [477 kB] Get:2930 http://deb.debian.org/debian bookworm/main amd64 llvm-14-linker-tools amd64 1:14.0.6-12 [1288 kB] Get:2931 http://deb.debian.org/debian bookworm/main amd64 llvm-14 amd64 1:14.0.6-12 [11.7 MB] Get:2932 http://deb.debian.org/debian bookworm/main amd64 llvm-14-tools amd64 1:14.0.6-12 [405 kB] Get:2933 http://deb.debian.org/debian bookworm/main amd64 llvm-14-dev amd64 1:14.0.6-12 [33.9 MB] Get:2934 http://deb.debian.org/debian bookworm/main amd64 lmodern all 2.005-1 [9480 kB] Get:2935 http://deb.debian.org/debian bookworm/main amd64 swi-prolog-core amd64 9.0.4+dfsg-2 [1448 kB] Get:2936 http://deb.debian.org/debian bookworm/main amd64 swi-prolog-doc all 9.0.4+dfsg-2 [1557 kB] Get:2937 http://deb.debian.org/debian bookworm/main amd64 swi-prolog-core-packages amd64 9.0.4+dfsg-2 [1336 kB] Get:2938 http://deb.debian.org/debian bookworm/main amd64 swi-prolog-nox amd64 9.0.4+dfsg-2 [167 kB] Get:2939 http://deb.debian.org/debian bookworm/main amd64 swi-prolog-x amd64 9.0.4+dfsg-2 [2136 kB] Get:2940 http://deb.debian.org/debian bookworm/main amd64 swi-prolog amd64 9.0.4+dfsg-2 [12.9 kB] Get:2941 http://deb.debian.org/debian bookworm/main amd64 logol-bin amd64 1.7.9+dfsg-6+b1 [267 kB] Get:2942 http://deb.debian.org/debian bookworm/main amd64 logol all 1.7.9+dfsg-6 [1535 kB] Get:2943 http://deb.debian.org/debian bookworm/main amd64 loki amd64 2.4.7.4-10 [362 kB] Get:2944 http://deb.debian.org/debian bookworm/main amd64 lsb-release all 12.0-1 [6416 B] Get:2945 http://deb.debian.org/debian bookworm/main amd64 ltrsift amd64 1.0.2-9+b1 [110 kB] Get:2946 http://deb.debian.org/debian bookworm/main amd64 lucy amd64 1.20-3 [913 kB] Get:2947 http://deb.debian.org/debian bookworm/main amd64 samblaster amd64 0.1.26-4 [24.9 kB] Get:2948 http://deb.debian.org/debian bookworm/main amd64 lumpy-sv amd64 0.3.1+dfsg-7 [195 kB] Get:2949 http://deb.debian.org/debian bookworm/main amd64 lynx-common all 2.9.0dev.12-1 [1166 kB] Get:2950 http://deb.debian.org/debian bookworm/main amd64 lynx amd64 2.9.0dev.12-1 [637 kB] Get:2951 http://deb.debian.org/debian bookworm/main amd64 macs amd64 2.2.7.1-6+b1 [2516 kB] Get:2952 http://deb.debian.org/debian bookworm/main amd64 sphinx-rtd-theme-common all 1.2.0+dfsg-1 [997 kB] Get:2953 http://deb.debian.org/debian bookworm/main amd64 macsyfinder amd64 2.0-2+b1 [12.1 MB] Get:2954 http://deb.debian.org/debian bookworm/main amd64 maffilter amd64 1.3.1+dfsg-4 [260 kB] Get:2955 http://deb.debian.org/debian bookworm/main amd64 megan-ce all 6.21.1+dfsg-2 [37.1 MB] Get:2956 http://deb.debian.org/debian bookworm/main amd64 malt all 0.5.2-2 [416 kB] Get:2957 http://deb.debian.org/debian bookworm/main amd64 manpages-dev all 6.03-2 [2030 kB] Get:2958 http://deb.debian.org/debian bookworm/main amd64 r-cran-iterators all 1.0.14-1 [337 kB] Get:2959 http://deb.debian.org/debian bookworm/main amd64 r-cran-foreach all 1.5.2-1 [122 kB] Get:2960 http://deb.debian.org/debian bookworm/main amd64 r-cran-gam amd64 1.22-1-1 [308 kB] Get:2961 http://deb.debian.org/debian bookworm/main amd64 r-cran-inline all 0.3.19-2 [129 kB] Get:2962 http://deb.debian.org/debian bookworm/main amd64 seqtk amd64 1.3-4 [30.6 kB] Get:2963 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcppgsl amd64 0.3.13-1 [203 kB] Get:2964 http://deb.debian.org/debian bookworm/main amd64 mapdamage all 2.2.1+dfsg-3 [41.9 kB] Get:2965 http://deb.debian.org/debian bookworm/main amd64 mapsembler2 amd64 2.2.4+dfsg1-4 [724 kB] Get:2966 http://deb.debian.org/debian bookworm/main amd64 maq amd64 0.7.1-9 [303 kB] Get:2967 http://deb.debian.org/debian bookworm/main amd64 maqview amd64 0.2.5-11 [119 kB] Get:2968 http://deb.debian.org/debian bookworm/main amd64 massxpert-data all 7.0.0-2 [97.1 kB] Get:2969 http://deb.debian.org/debian bookworm/main amd64 massxpert amd64 7.0.0-2 [1140 kB] Get:2970 http://deb.debian.org/debian bookworm/main amd64 progressivemauve amd64 1.2.0+4713+dfsg-5+b1 [870 kB] Get:2971 http://deb.debian.org/debian bookworm/main amd64 mauve-aligner all 2.4.0+4736-6 [489 kB] Get:2972 http://deb.debian.org/debian bookworm/main amd64 mcaller all 1.0.3+git20210624.b415090-3 [19.0 kB] Get:2973 http://deb.debian.org/debian bookworm/main amd64 mcl amd64 1:22-282+ds-2 [474 kB] Get:2974 http://deb.debian.org/debian bookworm/main amd64 mecat2 amd64 0.0+git20200428.f54c542+ds-3 [767 kB] Get:2975 http://deb.debian.org/debian bookworm/main amd64 med-all all 3.8.1 [7084 B] Get:2976 http://deb.debian.org/debian bookworm/main amd64 med-config all 3.8.1 [11.1 kB] Get:2977 http://deb.debian.org/debian bookworm/main amd64 med-tasks all 3.8.1 [8704 B] Get:2978 http://deb.debian.org/debian bookworm/main amd64 med-bio all 3.8.1 [14.4 kB] Get:2979 http://deb.debian.org/debian bookworm/main amd64 med-bio-dev all 3.8.1 [11.6 kB] Get:2980 http://deb.debian.org/debian bookworm/main amd64 med-statistics all 3.8.1 [9060 B] Get:2981 http://deb.debian.org/debian bookworm/main amd64 megadepth amd64 1.2.0-4 [80.2 kB] Get:2982 http://deb.debian.org/debian bookworm/main amd64 megahit amd64 1.2.9-4 [1144 kB] Get:2983 http://deb.debian.org/debian bookworm/main amd64 melting all 5.2.0-2 [3666 kB] Get:2984 http://deb.debian.org/debian bookworm/main amd64 mesa-va-drivers amd64 22.3.6-1+deb12u1 [3299 kB] Get:2985 http://deb.debian.org/debian bookworm/main amd64 mesa-vdpau-drivers amd64 22.3.6-1+deb12u1 [3181 kB] Get:2986 http://deb.debian.org/debian bookworm/main amd64 mesa-vulkan-drivers amd64 22.3.6-1+deb12u1 [8000 kB] Get:2987 http://deb.debian.org/debian bookworm/main amd64 metabat amd64 2.15-4 [500 kB] Get:2988 http://deb.debian.org/debian bookworm/main amd64 metaphlan2-data all 2.6.0+ds-4 [204 MB] Get:2989 http://deb.debian.org/debian bookworm/main amd64 metaphlan all 4.0.4-1 [2011 kB] Get:2990 http://deb.debian.org/debian bookworm/main amd64 metastudent-data all 2.0.1-8 [225 MB] Get:2991 http://deb.debian.org/debian bookworm/main amd64 metastudent all 2.0.1-9 [6004 kB] Get:2992 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib-venn all 0.11.6-3 [29.5 kB] Get:2993 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.sip amd64 12.11.1-1 [56.4 kB] Get:2994 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5 amd64 5.15.9+dfsg-1 [2489 kB] Get:2995 http://deb.debian.org/debian bookworm/main amd64 microbegps all 1.0.0-5 [14.2 MB] Get:2996 http://deb.debian.org/debian bookworm/main amd64 nast-ier amd64 20101212+dfsg1-5 [21.5 kB] Get:2997 http://deb.debian.org/debian bookworm/main amd64 wigeon all 20101212+dfsg1-5 [29.7 kB] Get:2998 http://deb.debian.org/debian bookworm/main amd64 microbiomeutil all 20101212+dfsg1-5 [19.8 kB] Get:2999 http://deb.debian.org/debian bookworm/main amd64 mindthegap amd64 2.3.0-2 [248 kB] Get:3000 http://deb.debian.org/debian bookworm/main amd64 minexpert2 amd64 8.6.3-1 [993 kB] Get:3001 http://deb.debian.org/debian bookworm/main amd64 minia amd64 3.2.6-3 [403 kB] Get:3002 http://deb.debian.org/debian bookworm/main amd64 miniasm amd64 0.3+dfsg-4 [29.9 kB] Get:3003 http://deb.debian.org/debian bookworm/main amd64 minimac4 amd64 4.1.2-1 [240 kB] Get:3004 http://deb.debian.org/debian bookworm/main amd64 minimap amd64 0.2-7 [25.9 kB] Get:3005 http://deb.debian.org/debian bookworm/main amd64 mipe all 1.1-9 [62.8 kB] Get:3006 http://deb.debian.org/debian bookworm/main amd64 python3-pybedtools amd64 0.9.0-4+b1 [12.2 MB] Get:3007 http://deb.debian.org/debian bookworm/main amd64 python3-mirtop all 0.4.25-2 [60.1 kB] Get:3008 http://deb.debian.org/debian bookworm/main amd64 mirtop all 0.4.25-2 [16.2 kB] Get:3009 http://deb.debian.org/debian bookworm/main amd64 mlv-smile amd64 1.47-8 [189 kB] Get:3010 http://deb.debian.org/debian bookworm/main amd64 mmb-common all 4.0.0+dfsg-2 [338 kB] Get:3011 http://deb.debian.org/debian bookworm/main amd64 mmb amd64 4.0.0+dfsg-2 [30.0 kB] Get:3012 http://deb.debian.org/debian bookworm/main amd64 mmseqs2 amd64 14-7e284+ds-1+b2 [23.7 MB] Get:3013 http://deb.debian.org/debian bookworm/main amd64 polkitd amd64 122-3 [112 kB] Get:3014 http://deb.debian.org/debian bookworm/main amd64 modemmanager amd64 1.20.4-1 [1008 kB] Get:3015 http://deb.debian.org/debian bookworm/main amd64 molequeue amd64 0.9.0-1+b2 [482 kB] Get:3016 http://deb.debian.org/debian bookworm/main amd64 mosdepth amd64 0.3.3+ds-2 [163 kB] Get:3017 http://deb.debian.org/debian bookworm/main amd64 mothur amd64 1.48.0-2 [5262 kB] Get:3018 http://deb.debian.org/debian bookworm/main amd64 mptp amd64 0.2.4-3+b2 [82.8 kB] Get:3019 http://deb.debian.org/debian bookworm/main amd64 mrbayes amd64 3.2.7a-6 [660 kB] Get:3020 http://deb.debian.org/debian bookworm/main amd64 python3-lzstring all 1.0.4-2 [5604 B] Get:3021 http://deb.debian.org/debian bookworm/main amd64 python3-markdown all 3.4.1-2 [64.7 kB] Get:3022 http://deb.debian.org/debian bookworm/main amd64 python3-mdurl all 0.1.2-1 [9444 B] Get:3023 http://deb.debian.org/debian bookworm/main amd64 python3-markdown-it all 2.1.0-5 [58.8 kB] Get:3024 http://deb.debian.org/debian bookworm/main amd64 python3-rich all 13.3.1-1 [202 kB] Get:3025 http://deb.debian.org/debian bookworm/main amd64 python3-rich-click all 1.6.0-1 [20.8 kB] Get:3026 http://deb.debian.org/debian bookworm/main amd64 python3-simplejson amd64 3.18.3-1 [59.8 kB] Get:3027 http://deb.debian.org/debian bookworm/main amd64 python3-colormath all 3.0.0-4 [34.7 kB] Get:3028 http://deb.debian.org/debian bookworm/main amd64 python3-spectra all 0.0.11-4 [16.5 kB] Get:3029 http://deb.debian.org/debian bookworm/main amd64 multiqc all 1.14+dfsg-1 [657 kB] Get:3030 http://deb.debian.org/debian bookworm/main amd64 mupdf-tools amd64 1.21.1+ds2-1+b4 [45.4 MB] Get:3031 http://deb.debian.org/debian bookworm/main amd64 r-cran-gtools amd64 3.9.4-1 [359 kB] Get:3032 http://deb.debian.org/debian bookworm/main amd64 r-cran-bitops amd64 1.0-7-1 [30.2 kB] Get:3033 http://deb.debian.org/debian bookworm/main amd64 r-cran-catools amd64 1.18.2-1+b1 [204 kB] Get:3034 http://deb.debian.org/debian bookworm/main amd64 r-cran-kernsmooth amd64 2.23-20-1 [91.5 kB] Get:3035 http://deb.debian.org/debian bookworm/main amd64 r-cran-gdata all 2.18.0.1-1 [1033 kB] Get:3036 http://deb.debian.org/debian bookworm/main amd64 r-cran-gplots all 3.1.3-1 [607 kB] Get:3037 http://deb.debian.org/debian bookworm/main amd64 r-cran-rocr all 1.0-11-2 [446 kB] Get:3038 http://deb.debian.org/debian bookworm/main amd64 murasaki-common all 1.68.6-13 [145 kB] Get:3039 http://deb.debian.org/debian bookworm/main amd64 murasaki amd64 1.68.6-13+b3 [519 kB] Get:3040 http://deb.debian.org/debian bookworm/main amd64 muscle amd64 1:5.1.0-1 [297 kB] Get:3041 http://deb.debian.org/debian bookworm/main amd64 mustang amd64 3.2.4-1 [105 kB] Get:3042 http://deb.debian.org/debian bookworm/main amd64 nanofilt all 2.8.0-1 [12.4 kB] Get:3043 http://deb.debian.org/debian bookworm/main amd64 python3-mappy amd64 2.24+dfsg-3+b1 [133 kB] Get:3044 http://deb.debian.org/debian bookworm/main amd64 nanolyse amd64 1.2.0-4 [25.3 kB] Get:3045 http://deb.debian.org/debian bookworm/main amd64 r-cran-reshape all 0.8.9-1 [169 kB] Get:3046 http://deb.debian.org/debian bookworm/main amd64 texlive-base all 2022.20230122-3 [21.9 MB] Get:3047 http://deb.debian.org/debian bookworm/main amd64 texlive-latex-base all 2022.20230122-3 [1182 kB] Get:3048 http://deb.debian.org/debian bookworm/main amd64 nanook all 1.33+dfsg-5 [196 kB] Get:3049 http://deb.debian.org/debian bookworm/main amd64 nanopolish amd64 0.14.0-1 [2202 kB] Get:3050 http://deb.debian.org/debian bookworm/main amd64 python3-wrapt amd64 1.14.1-2+b2 [42.1 kB] Get:3051 http://deb.debian.org/debian bookworm/main amd64 python3-deprecated all 1.2.13-3 [14.1 kB] Get:3052 http://deb.debian.org/debian bookworm/main amd64 python3-nanomath all 1.2.1+ds-1 [8120 B] Get:3053 http://deb.debian.org/debian bookworm/main amd64 python3-nanoget all 1.16.1-2 [11.4 kB] Get:3054 http://deb.debian.org/debian bookworm/main amd64 python3-nanostat all 1.4.0-3 [8576 B] Get:3055 http://deb.debian.org/debian bookworm/main amd64 nanostat all 1.4.0-3 [2748 B] Get:3056 http://deb.debian.org/debian bookworm/main amd64 nanosv all 1.2.4+git20190409.c1ae30c-6 [3043 kB] Get:3057 http://deb.debian.org/debian bookworm/main amd64 ncbi-acc-download all 0.2.8-1 [12.8 kB] Get:3058 http://deb.debian.org/debian bookworm/main amd64 ncbi-cn3d amd64 3.0.20170106+dfsg1-10 [47.8 kB] Get:3059 http://deb.debian.org/debian bookworm/main amd64 ncbi-entrez-direct amd64 19.0.20230216+dfsg-2+b1 [6041 kB] Get:3060 http://deb.debian.org/debian bookworm/main amd64 ncbi-seg amd64 0.0.20000620-6 [84.7 kB] Get:3061 http://deb.debian.org/debian bookworm/main amd64 ncbi-tools-bin amd64 6.1.20170106+dfsg1-10 [1941 kB] Get:3062 http://deb.debian.org/debian bookworm/main amd64 ncbi-tools-x11 amd64 6.1.20170106+dfsg1-10 [1155 kB] Get:3063 http://deb.debian.org/debian bookworm/main amd64 ncl-tools amd64 2.1.21+git20210811.b1213a7-4 [199 kB] Get:3064 http://deb.debian.org/debian bookworm/main amd64 ncoils amd64 2002-9 [22.2 kB] Get:3065 http://deb.debian.org/debian bookworm/main amd64 neobio all 0.0.20030929-6 [292 kB] Get:3066 http://deb.debian.org/debian bookworm/main amd64 netpbm amd64 2:11.01.00-2 [2015 kB] Get:3067 http://deb.debian.org/debian bookworm/main amd64 ngmlr amd64 0.2.7+git20210816.a2a31fb+dfsg-2+b1 [690 kB] Get:3068 http://deb.debian.org/debian bookworm/main amd64 nim amd64 1.6.10-2 [4077 kB] Get:3069 http://deb.debian.org/debian bookworm/main amd64 nim-hts-dev all 0.3.19+ds-1 [35.7 kB] Get:3070 http://deb.debian.org/debian bookworm/main amd64 nim-kexpr-dev all 0.0.2-3 [7976 B] Get:3071 http://deb.debian.org/debian bookworm/main amd64 nim-lapper-dev all 0.1.7-5 [7356 B] Get:3072 http://deb.debian.org/debian bookworm/main amd64 ninja-build amd64 1.11.1-1 [136 kB] Get:3073 http://deb.debian.org/debian bookworm/main amd64 njplot amd64 2.4-9 [101 kB] Get:3074 http://deb.debian.org/debian bookworm/main amd64 node-clipboard all 2.0.11+ds+~cs9.6.11-1 [21.0 kB] Get:3075 http://deb.debian.org/debian bookworm/main amd64 node-highlight.js all 9.18.5+dfsg1-2 [333 kB] Get:3076 http://deb.debian.org/debian bookworm/main amd64 node-jquery all 3.6.1+dfsg+~3.5.14-1 [160 kB] Get:3077 http://deb.debian.org/debian bookworm/main amd64 node-natural-sort all 1.0.0-5 [4296 B] Get:3078 http://deb.debian.org/debian bookworm/main amd64 node-thenby all 1.3.4+git20200720.0fd165a+ds-3 [4836 B] Get:3079 http://deb.debian.org/debian bookworm/main amd64 nodejs-doc all 18.13.0+dfsg1-1 [3358 kB] Get:3080 http://deb.debian.org/debian bookworm/main amd64 profnet-norsnet amd64 1.0.22-8 [44.7 kB] Get:3081 http://deb.debian.org/debian bookworm/main amd64 norsnet all 1.0.17-7 [44.3 kB] Get:3082 http://deb.debian.org/debian bookworm/main amd64 norsp all 1.0.6-7 [279 kB] Get:3083 http://deb.debian.org/debian bookworm/main amd64 ntcard amd64 1.2.2+dfsg-5 [40.2 kB] Get:3084 http://deb.debian.org/debian bookworm/main amd64 numba-doc all 0.56.4+dfsg-2 [970 kB] Get:3085 http://deb.debian.org/debian bookworm/main amd64 nxtrim amd64 0.4.3+dfsg-3 [35.1 kB] Get:3086 http://deb.debian.org/debian bookworm/main amd64 python3-pip-whl all 23.0.1+dfsg-1 [1717 kB] Get:3087 http://deb.debian.org/debian bookworm/main amd64 python3-setuptools-whl all 66.1.1-1 [1111 kB] Get:3088 http://deb.debian.org/debian bookworm/main amd64 python3-wheel-whl all 0.38.4-2 [38.6 kB] Get:3089 http://deb.debian.org/debian bookworm/main amd64 python3-distlib all 0.3.6-1 [257 kB] Get:3090 http://deb.debian.org/debian bookworm/main amd64 python3-virtualenv all 20.17.1+ds-1 [93.9 kB] Get:3091 http://deb.debian.org/debian bookworm/main amd64 python3-wheel all 0.38.4-2 [30.8 kB] Get:3092 http://deb.debian.org/debian bookworm/main amd64 obitools amd64 1.2.13+dfsg-5+b1 [680 kB] Get:3093 http://deb.debian.org/debian bookworm/main amd64 octave-doc all 7.3.0-2 [8270 kB] Get:3094 http://deb.debian.org/debian bookworm/main amd64 python3-progressbar all 2.5-3 [11.6 kB] Get:3095 http://deb.debian.org/debian bookworm/main amd64 ont-fast5-api amd64 4.1.1+dfsg-2+b1 [50.8 kB] Get:3096 http://deb.debian.org/debian bookworm/main amd64 openjfx-source all 11.0.11+1-3 [6075 kB] Get:3097 http://deb.debian.org/debian bookworm/main amd64 topp amd64 2.6.0+cleaned1-3+b4 [3116 kB] Get:3098 http://deb.debian.org/debian bookworm/main amd64 openms all 2.6.0+cleaned1-3 [56.0 kB] Get:3099 http://deb.debian.org/debian bookworm/main amd64 optimir all 1.2-1 [1027 kB] Get:3100 http://deb.debian.org/debian bookworm/main amd64 pal2nal all 14.1-3 [17.8 kB] Get:3101 http://deb.debian.org/debian bookworm/main amd64 python3-configargparse all 1.5.3-1 [26.1 kB] Get:3102 http://deb.debian.org/debian bookworm/main amd64 python3-setproctitle amd64 1.3.1-1+b2 [17.9 kB] Get:3103 http://deb.debian.org/debian bookworm/main amd64 phylip amd64 1:3.697+dfsg-2 [919 kB] Get:3104 http://deb.debian.org/debian bookworm/main amd64 radiant all 2.8.1+dfsg-2 [181 kB] Get:3105 http://deb.debian.org/debian bookworm/main amd64 paleomix amd64 1.3.7-3 [984 kB] Get:3106 http://deb.debian.org/debian bookworm/main amd64 paraclu amd64 10-1 [14.0 kB] Get:3107 http://deb.debian.org/debian bookworm/main amd64 parasail amd64 2.6+dfsg-1 [62.9 kB] Get:3108 http://deb.debian.org/debian bookworm/main amd64 parsinsert amd64 1.04-12 [67.5 kB] Get:3109 http://deb.debian.org/debian bookworm/main amd64 phipack amd64 0.0.20160614-5 [54.8 kB] Get:3110 http://deb.debian.org/debian bookworm/main amd64 parsnp amd64 1.7.4+dfsg-2 [196 kB] Get:3111 http://deb.debian.org/debian bookworm/main amd64 patman amd64 1.2.2+dfsg-8+b1 [27.9 kB] Get:3112 http://deb.debian.org/debian bookworm/main amd64 pbbamtools amd64 2.1.0+dfsg-2 [126 kB] Get:3113 http://deb.debian.org/debian bookworm/main amd64 pbdagcon amd64 0.3+git20180411.c14c422+dfsg-8 [355 kB] Get:3114 http://deb.debian.org/debian bookworm/main amd64 python3-pbsuite-utils all 15.8.24+dfsg-7 [509 kB] Get:3115 http://deb.debian.org/debian bookworm/main amd64 pbjelly all 15.8.24+dfsg-7 [967 kB] Get:3116 http://deb.debian.org/debian bookworm/main amd64 python3-pbbanana all 15.8.24+dfsg-7 [20.1 kB] Get:3117 http://deb.debian.org/debian bookworm/main amd64 python3-sortedcontainers all 2.4.0-2 [31.9 kB] Get:3118 http://deb.debian.org/debian bookworm/main amd64 python3-intervaltree all 3.0.2-1.1 [26.3 kB] Get:3119 http://deb.debian.org/debian bookworm/main amd64 python3-intervaltree-bio all 1.0.1-4 [8640 B] Get:3120 http://deb.debian.org/debian bookworm/main amd64 pbhoney all 15.8.24+dfsg-7 [1056 kB] Get:3121 http://deb.debian.org/debian bookworm/main amd64 pbsim amd64 1.0.3+git20180330.e014b1d+dfsg-3 [25.5 kB] Get:3122 http://deb.debian.org/debian bookworm/main amd64 pbsuite all 15.8.24+dfsg-7 [5416 B] Get:3123 http://deb.debian.org/debian bookworm/main amd64 python3-pdbx all 2.0.1-2 [17.4 kB] Get:3124 http://deb.debian.org/debian bookworm/main amd64 python3-propka all 3.5.0-1 [65.6 kB] Get:3125 http://deb.debian.org/debian bookworm/main amd64 python3-pdb2pqr all 3.5.2+dfsg-3 [136 kB] Get:3126 http://deb.debian.org/debian bookworm/main amd64 pdb2pqr all 3.5.2+dfsg-3 [11.6 kB] Get:3127 http://deb.debian.org/debian bookworm/main amd64 perl-doc all 5.36.0-7+deb12u1 [7894 kB] Get:3128 http://deb.debian.org/debian bookworm/main amd64 perl-tk amd64 1:804.036-1+b2 [2009 kB] Get:3129 http://deb.debian.org/debian bookworm/main amd64 perlprimer all 1.2.4-2 [100 kB] Get:3130 http://deb.debian.org/debian bookworm/main amd64 perm amd64 0.4.0-8+b1 [127 kB] Get:3131 http://deb.debian.org/debian bookworm/main amd64 pftools amd64 3.2.12-1 [24.8 MB] Get:3132 http://deb.debian.org/debian bookworm/main amd64 phast amd64 1.6+dfsg-3+b1 [3021 kB] Get:3133 http://deb.debian.org/debian bookworm/main amd64 phybin amd64 0.3-6 [1653 kB] Get:3134 http://deb.debian.org/debian bookworm/main amd64 phylonium amd64 1.6-1 [290 kB] Get:3135 http://deb.debian.org/debian bookworm/main amd64 physamp amd64 1.1.0-4 [185 kB] Get:3136 http://deb.debian.org/debian bookworm/main amd64 phyutility amd64 2.7.3+dfsg-4 [894 kB] Get:3137 http://deb.debian.org/debian bookworm/main amd64 phyx amd64 1.3+ds-2 [2181 kB] Get:3138 http://deb.debian.org/debian bookworm/main amd64 python3-watchdog all 2.2.1-1 [124 kB] Get:3139 http://deb.debian.org/debian bookworm/main amd64 python3-picopore all 1.2.0-2 [15.4 kB] Get:3140 http://deb.debian.org/debian bookworm/main amd64 picopore all 1.2.0-2 [10.4 kB] Get:3141 http://deb.debian.org/debian bookworm/main amd64 rna-star amd64 2.7.10b+dfsg-2+b2 [3447 kB] Get:3142 http://deb.debian.org/debian bookworm/main amd64 python3-deeptoolsintervals amd64 0.1.9-3+b6 [51.1 kB] Get:3143 http://deb.debian.org/debian bookworm/main amd64 python3-numpydoc all 1.5.0-1 [43.0 kB] Get:3144 http://deb.debian.org/debian bookworm/main amd64 python3-pbr all 5.10.0-2 [61.4 kB] Get:3145 http://deb.debian.org/debian bookworm/main amd64 python3-tenacity all 8.2.1-1 [43.6 kB] Get:3146 http://deb.debian.org/debian bookworm/main amd64 python3-plotly all 5.4.1+dfsg-1 [2613 kB] Get:3147 http://deb.debian.org/debian bookworm/main amd64 python3-py2bit amd64 0.3.1-1+b2 [18.7 kB] Get:3148 http://deb.debian.org/debian bookworm/main amd64 python3-deeptools all 3.5.1-3 [159 kB] Get:3149 http://deb.debian.org/debian bookworm/main amd64 r-bioc-s4vectors amd64 0.36.1-1 [2026 kB] Get:3150 http://deb.debian.org/debian bookworm/main amd64 r-bioc-iranges amd64 2.32.0-1 [2222 kB] Get:3151 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcurl amd64 1.98-1.10+dfsg-1 [783 kB] Get:3152 http://deb.debian.org/debian bookworm/main amd64 r-bioc-genomeinfodbdata all 1.2.9-1 [11.7 MB] Get:3153 http://deb.debian.org/debian bookworm/main amd64 r-bioc-genomeinfodb all 1.34.9-1 [3938 kB] Get:3154 http://deb.debian.org/debian bookworm/main amd64 r-bioc-zlibbioc all 1.44.0+dfsg-1 [9200 B] Get:3155 http://deb.debian.org/debian bookworm/main amd64 r-bioc-xvector amd64 0.38.0-1 [618 kB] Get:3156 http://deb.debian.org/debian bookworm/main amd64 r-bioc-genomicranges amd64 1.50.2+dfsg-1 [1796 kB] Get:3157 http://deb.debian.org/debian bookworm/main amd64 r-bioc-matrixgenerics all 1.10.0-1 [302 kB] Get:3158 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biobase amd64 2.58.0-2 [2112 kB] Get:3159 http://deb.debian.org/debian bookworm/main amd64 r-bioc-delayedarray amd64 0.24.0+dfsg-1 [1937 kB] Get:3160 http://deb.debian.org/debian bookworm/main amd64 r-bioc-summarizedexperiment all 1.28.0+dfsg-1 [2018 kB] Get:3161 http://deb.debian.org/debian bookworm/main amd64 r-cran-formatr all 1.14-1 [152 kB] Get:3162 http://deb.debian.org/debian bookworm/main amd64 r-cran-lambda.r all 1.2.4-2 [118 kB] Get:3163 http://deb.debian.org/debian bookworm/main amd64 r-cran-futile.options all 1.0.1-3 [20.0 kB] Get:3164 http://deb.debian.org/debian bookworm/main amd64 r-cran-futile.logger all 1.4.3-4 [98.4 kB] Get:3165 http://deb.debian.org/debian bookworm/main amd64 r-cran-snow all 1:0.4.4-2 [98.9 kB] Get:3166 http://deb.debian.org/debian bookworm/main amd64 r-cran-bh all 1.74.0-2 [5524 B] Get:3167 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biocparallel amd64 1.32.5-1 [1337 kB] Get:3168 http://deb.debian.org/debian bookworm/main amd64 r-cran-locfit amd64 1.5-9.7-1 [507 kB] Get:3169 http://deb.debian.org/debian bookworm/main amd64 r-cran-dbi all 1.1.3-1 [687 kB] Get:3170 http://deb.debian.org/debian bookworm/main amd64 r-cran-bit amd64 4.0.5-1 [1070 kB] Get:3171 http://deb.debian.org/debian bookworm/main amd64 r-cran-bit64 amd64 4.0.5-1 [463 kB] Get:3172 http://deb.debian.org/debian bookworm/main amd64 r-cran-blob all 1.2.3-1 [49.5 kB] Get:3173 http://deb.debian.org/debian bookworm/main amd64 r-cran-plogr all 0.2.0-3 [14.9 kB] Get:3174 http://deb.debian.org/debian bookworm/main amd64 r-cran-rsqlite amd64 2.2.20-1 [1123 kB] Get:3175 http://deb.debian.org/debian bookworm/main amd64 r-cran-curl amd64 5.0.0+dfsg-1 [172 kB] Get:3176 http://deb.debian.org/debian bookworm/main amd64 r-cran-sys amd64 3.4.1-1 [42.7 kB] Get:3177 http://deb.debian.org/debian bookworm/main amd64 r-cran-askpass amd64 1.1-2 [22.2 kB] Get:3178 http://deb.debian.org/debian bookworm/main amd64 r-cran-openssl amd64 2.0.5+dfsg-1 [391 kB] Get:3179 http://deb.debian.org/debian bookworm/main amd64 r-cran-httr all 1.4.5+dfsg-1 [465 kB] Get:3180 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biostrings amd64 2.66.0-1 [13.8 MB] Get:3181 http://deb.debian.org/debian bookworm/main amd64 r-bioc-keggrest all 1.38.0+dfsg-1 [179 kB] Get:3182 http://deb.debian.org/debian bookworm/main amd64 r-bioc-annotationdbi all 1.60.0-1 [4696 kB] Get:3183 http://deb.debian.org/debian bookworm/main amd64 r-cran-xml amd64 3.99-0.13-1 [1717 kB] Get:3184 http://deb.debian.org/debian bookworm/main amd64 r-bioc-annotate all 1.76.0+dfsg-1 [1727 kB] Get:3185 http://deb.debian.org/debian bookworm/main amd64 r-bioc-geneplotter all 1.76.0-1 [1488 kB] Get:3186 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcpparmadillo amd64 0.12.0.1.0-1 [841 kB] Get:3187 http://deb.debian.org/debian bookworm/main amd64 r-bioc-deseq2 amd64 1.38.3+dfsg-1 [1288 kB] Get:3188 http://deb.debian.org/debian bookworm/main amd64 r-bioc-rhtslib amd64 2.0.0+dfsg-1 [1287 kB] Get:3189 http://deb.debian.org/debian bookworm/main amd64 r-bioc-rsamtools amd64 2.14.0-1 [3755 kB] Get:3190 http://deb.debian.org/debian bookworm/main amd64 r-bioc-genomicalignments amd64 1.34.0-1 [2112 kB] Get:3191 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biocio all 1.8.0+dfsg-1 [201 kB] Get:3192 http://deb.debian.org/debian bookworm/main amd64 r-cran-rjson amd64 0.2.21-1 [139 kB] Get:3193 http://deb.debian.org/debian bookworm/main amd64 r-cran-restfulr amd64 0.0.15-1 [382 kB] Get:3194 http://deb.debian.org/debian bookworm/main amd64 r-bioc-rtracklayer amd64 1.58.0-1 [5104 kB] Get:3195 http://deb.debian.org/debian bookworm/main amd64 r-bioc-tximport all 1.26.1+dfsg-1 [87.9 kB] Get:3196 http://deb.debian.org/debian bookworm/main amd64 r-cran-corrplot all 0.92-1 [131 kB] Get:3197 http://deb.debian.org/debian bookworm/main amd64 r-cran-lazyeval amd64 0.2.2-1+b1 [142 kB] Get:3198 http://deb.debian.org/debian bookworm/main amd64 r-cran-crosstalk all 1.2.0+dfsg-1 [171 kB] Get:3199 http://deb.debian.org/debian bookworm/main amd64 r-cran-dt all 0.27+dfsg-1 [236 kB] Get:3200 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggrepel amd64 0.9.3-1 [247 kB] Get:3201 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggsci all 2.9-3 [2905 kB] Get:3202 http://deb.debian.org/debian bookworm/main amd64 r-cran-cowplot all 1.1.1+dfsg-1 [636 kB] Get:3203 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggsignif all 0.6.4-1 [589 kB] Get:3204 http://deb.debian.org/debian bookworm/main amd64 r-cran-polynom all 1.4-1+dfsg-1 [92.5 kB] Get:3205 http://deb.debian.org/debian bookworm/main amd64 r-cran-broom all 1.0.3+dfsg-2 [1776 kB] Get:3206 http://deb.debian.org/debian bookworm/main amd64 r-cran-cardata all 3.0.5-1 [1797 kB] Get:3207 http://deb.debian.org/debian bookworm/main amd64 r-cran-abind all 1.4-5-2 [64.6 kB] Get:3208 http://deb.debian.org/debian bookworm/main amd64 r-cran-boot all 1.3-28.1-1 [620 kB] Get:3209 http://deb.debian.org/debian bookworm/main amd64 r-cran-minqa amd64 1.2.5-1 [113 kB] Get:3210 http://deb.debian.org/debian bookworm/main amd64 r-cran-brio amd64 1.1.3-1+b1 [35.5 kB] Get:3211 http://deb.debian.org/debian bookworm/main amd64 r-cran-ps amd64 1.7.2-1 [308 kB] Get:3212 http://deb.debian.org/debian bookworm/main amd64 r-cran-processx amd64 3.8.0-1 [339 kB] Get:3213 http://deb.debian.org/debian bookworm/main amd64 r-cran-callr all 3.7.3-2 [426 kB] Get:3214 http://deb.debian.org/debian bookworm/main amd64 r-cran-rprojroot all 2.0.3-1 [119 kB] Get:3215 http://deb.debian.org/debian bookworm/main amd64 r-cran-desc all 1.4.2-1 [348 kB] Get:3216 http://deb.debian.org/debian bookworm/main amd64 r-cran-pkgload all 1.3.2-1 [206 kB] Get:3217 http://deb.debian.org/debian bookworm/main amd64 r-cran-praise all 1.0.0-4 [20.1 kB] Get:3218 http://deb.debian.org/debian bookworm/main amd64 r-cran-diffobj amd64 0.3.5-1+b1 [1122 kB] Get:3219 http://deb.debian.org/debian bookworm/main amd64 r-cran-rematch2 all 2.1.2-2 [46.3 kB] Get:3220 http://deb.debian.org/debian bookworm/main amd64 r-cran-waldo all 0.4.0-1 [116 kB] Get:3221 http://deb.debian.org/debian bookworm/main amd64 r-cran-testthat amd64 3.1.6-1 [1545 kB] Get:3222 http://deb.debian.org/debian bookworm/main amd64 r-cran-nloptr amd64 2.0.3-1 [375 kB] Get:3223 http://deb.debian.org/debian bookworm/main amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] Get:3224 http://deb.debian.org/debian bookworm/main amd64 r-cran-lme4 amd64 1.1-31-1 [4087 kB] Get:3225 http://deb.debian.org/debian bookworm/main amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] Get:3226 http://deb.debian.org/debian bookworm/main amd64 r-cran-pbkrtest all 0.5.2-2 [184 kB] Get:3227 http://deb.debian.org/debian bookworm/main amd64 r-cran-sparsem amd64 1.81-1 [905 kB] Get:3228 http://deb.debian.org/debian bookworm/main amd64 r-cran-matrixmodels all 0.5-1-1 [375 kB] Get:3229 http://deb.debian.org/debian bookworm/main amd64 r-cran-class amd64 7.3-21-1 [86.7 kB] Get:3230 http://deb.debian.org/debian bookworm/main amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] Get:3231 http://deb.debian.org/debian bookworm/main amd64 r-cran-e1071 amd64 1.7-13-1 [568 kB] Get:3232 http://deb.debian.org/debian bookworm/main amd64 r-cran-modelmetrics amd64 1.2.2.2-1+b1 [125 kB] Get:3233 http://deb.debian.org/debian bookworm/main amd64 r-cran-proc amd64 1.18.0-1+b1 [983 kB] Get:3234 http://deb.debian.org/debian bookworm/main amd64 r-cran-tzdb amd64 0.3.0-1 [484 kB] Get:3235 http://deb.debian.org/debian bookworm/main amd64 r-cran-clock amd64 0.6.1-2 [1768 kB] Get:3236 http://deb.debian.org/debian bookworm/main amd64 r-cran-gower amd64 1.0.1-1 [207 kB] Get:3237 http://deb.debian.org/debian bookworm/main amd64 r-cran-hardhat all 1.2.0+dfsg-1 [622 kB] Get:3238 http://deb.debian.org/debian bookworm/main amd64 r-cran-globals all 0.16.2-1 [118 kB] Get:3239 http://deb.debian.org/debian bookworm/main amd64 r-cran-listenv all 0.9.0+dfsg-1 [112 kB] Get:3240 http://deb.debian.org/debian bookworm/main amd64 r-cran-parallelly all 1.34.0-1 [337 kB] Get:3241 http://deb.debian.org/debian bookworm/main amd64 r-cran-future all 1.31.0+dfsg-1 [612 kB] Get:3242 http://deb.debian.org/debian bookworm/main amd64 r-cran-future.apply all 1.10.0+dfsg-1 [165 kB] Get:3243 http://deb.debian.org/debian bookworm/main amd64 r-cran-progressr all 0.13.0-1 [336 kB] Get:3244 http://deb.debian.org/debian bookworm/main amd64 r-cran-squarem all 2021.1-1 [179 kB] Get:3245 http://deb.debian.org/debian bookworm/main amd64 r-cran-lava all 1.7.2.1+dfsg-1 [2203 kB] Get:3246 http://deb.debian.org/debian bookworm/main amd64 r-cran-prodlim amd64 2019.11.13-1+b1 [395 kB] Get:3247 http://deb.debian.org/debian bookworm/main amd64 r-cran-ipred amd64 0.9-13-1 [386 kB] Get:3248 http://deb.debian.org/debian bookworm/main amd64 r-cran-timechange amd64 0.2.0-1 [178 kB] Get:3249 http://deb.debian.org/debian bookworm/main amd64 r-cran-lubridate amd64 1.9.2+dfsg-1 [994 kB] Get:3250 http://deb.debian.org/debian bookworm/main amd64 r-cran-timedate amd64 4022.108-1 [1185 kB] Get:3251 http://deb.debian.org/debian bookworm/main amd64 r-cran-recipes all 1.0.4+dfsg-1 [1871 kB] Get:3252 http://deb.debian.org/debian bookworm/main amd64 r-cran-reshape2 amd64 1.4.4-2 [114 kB] Get:3253 http://deb.debian.org/debian bookworm/main amd64 r-cran-caret amd64 6.0-93+dfsg-1 [3447 kB] Get:3254 http://deb.debian.org/debian bookworm/main amd64 r-cran-conquer amd64 1.3.2-1 [459 kB] Get:3255 http://deb.debian.org/debian bookworm/main amd64 r-cran-quantreg amd64 5.94-1 [1535 kB] Get:3256 http://deb.debian.org/debian bookworm/main amd64 r-cran-sp amd64 1:1.6-0+dfsg-1 [1532 kB] Get:3257 http://deb.debian.org/debian bookworm/main amd64 r-cran-maptools amd64 1:1.1-6+dfsg-1 [1558 kB] Get:3258 http://deb.debian.org/debian bookworm/main amd64 r-cran-forcats all 1.0.0-1 [413 kB] Get:3259 http://deb.debian.org/debian bookworm/main amd64 r-cran-hms all 1.1.2-1 [104 kB] Get:3260 http://deb.debian.org/debian bookworm/main amd64 r-cran-clipr all 0.8.0-1 [53.0 kB] Get:3261 http://deb.debian.org/debian bookworm/main amd64 r-cran-prettyunits all 1.1.1-2 [39.1 kB] Get:3262 http://deb.debian.org/debian bookworm/main amd64 r-cran-progress all 1.2.2-2 [88.9 kB] Get:3263 http://deb.debian.org/debian bookworm/main amd64 r-cran-vroom amd64 1.6.1-1 [842 kB] Get:3264 http://deb.debian.org/debian bookworm/main amd64 r-cran-readr amd64 2.1.4-1 [776 kB] Get:3265 http://deb.debian.org/debian bookworm/main amd64 r-cran-haven amd64 2.5.1-1 [343 kB] Get:3266 http://deb.debian.org/debian bookworm/main amd64 r-cran-rematch all 1.0.1-3 [14.1 kB] Get:3267 http://deb.debian.org/debian bookworm/main amd64 r-cran-cellranger all 1.1.0-3 [100 kB] Get:3268 http://deb.debian.org/debian bookworm/main amd64 r-cran-readxl amd64 1.4.2-1 [723 kB] Get:3269 http://deb.debian.org/debian bookworm/main amd64 r-cran-zip amd64 2.2.2-1+b1 [113 kB] Get:3270 http://deb.debian.org/debian bookworm/main amd64 r-cran-openxlsx amd64 4.2.5.2-1 [1929 kB] Get:3271 http://deb.debian.org/debian bookworm/main amd64 r-cran-rio all 0.5.29-1 [474 kB] Get:3272 http://deb.debian.org/debian bookworm/main amd64 r-cran-car all 3.1-1-1 [1699 kB] Get:3273 http://deb.debian.org/debian bookworm/main amd64 r-cran-rstatix all 0.7.2-1 [609 kB] Get:3274 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggpubr all 0.6.0-1 [2080 kB] Get:3275 http://deb.debian.org/debian bookworm/main amd64 r-cran-miniui all 0.1.1.1-3 [35.9 kB] Get:3276 http://deb.debian.org/debian bookworm/main amd64 r-cran-shinyjs all 2.1.0-1 [1009 kB] Get:3277 http://deb.debian.org/debian bookworm/main amd64 r-cran-colourpicker all 1.2.0+dfsg-1 [1165 kB] Get:3278 http://deb.debian.org/debian bookworm/main amd64 r-cran-plotly all 4.10.1+dfsg-2 [3339 kB] Get:3279 http://deb.debian.org/debian bookworm/main amd64 r-cran-gprofiler2 all 0.2.1+dfsg-1 [124 kB] Get:3280 http://deb.debian.org/debian bookworm/main amd64 r-cran-pheatmap all 1.0.12-2 [77.9 kB] Get:3281 http://deb.debian.org/debian bookworm/main amd64 salmon amd64 1.10.1+ds1-1+b1 [3297 kB] Get:3282 http://deb.debian.org/debian bookworm/main amd64 python3-connection-pool all 0.0.3-2 [5584 B] Get:3283 http://deb.debian.org/debian bookworm/main amd64 python3-datrie amd64 0.8.2-4+b1 [97.7 kB] Get:3284 http://deb.debian.org/debian bookworm/main amd64 python3-smmap all 5.0.0-1 [21.0 kB] Get:3285 http://deb.debian.org/debian bookworm/main amd64 python3-gitdb all 4.0.9-2 [45.7 kB] Get:3286 http://deb.debian.org/debian bookworm/main amd64 python3-git all 3.1.30-1+deb12u2 [135 kB] Get:3287 http://deb.debian.org/debian bookworm/main amd64 python3-pulp all 2.6.0+dfsg-1 [66.0 kB] Get:3288 http://deb.debian.org/debian bookworm/main amd64 python3-retry all 0.9.2-2 [7020 B] Get:3289 http://deb.debian.org/debian bookworm/main amd64 python3-blinker all 1.5-1 [14.7 kB] Get:3290 http://deb.debian.org/debian bookworm/main amd64 python3-cryptography amd64 38.0.4-3 [666 kB] Get:3291 http://deb.debian.org/debian bookworm/main amd64 python3-jwt all 2.6.0-1 [26.6 kB] Get:3292 http://deb.debian.org/debian bookworm/main amd64 python3-oauthlib all 3.2.2-1 [95.4 kB] Get:3293 http://deb.debian.org/debian bookworm/main amd64 python3-requests-oauthlib all 1.3.0+ds-1 [20.7 kB] Get:3294 http://deb.debian.org/debian bookworm/main amd64 python3-msrest all 0.6.21-2 [48.0 kB] Get:3295 http://deb.debian.org/debian bookworm/main amd64 python3-adal all 1.2.7-2 [32.1 kB] Get:3296 http://deb.debian.org/debian bookworm/main amd64 python3-msrestazure all 0.6.4-2 [26.4 kB] Get:3297 http://deb.debian.org/debian bookworm/main amd64 python3-multidict amd64 6.0.4-1+b1 [31.6 kB] Get:3298 http://deb.debian.org/debian bookworm/main amd64 python3-yarl amd64 1.8.2-1+b1 [49.8 kB] Get:3299 http://deb.debian.org/debian bookworm/main amd64 python3-async-timeout all 4.0.2-1 [7476 B] Get:3300 http://deb.debian.org/debian bookworm/main amd64 python3-frozenlist amd64 1.3.3-1+b1 [30.0 kB] Get:3301 http://deb.debian.org/debian bookworm/main amd64 python3-aiosignal all 1.3.1-1 [6016 B] Get:3302 http://deb.debian.org/debian bookworm/main amd64 python3-aiohttp amd64 3.8.4-1 [251 kB] Get:3303 http://deb.debian.org/debian bookworm/main amd64 python3-azure-storage all 20230112+git-1 [280 kB] Get:3304 http://deb.debian.org/debian bookworm/main amd64 python3-marshmallow all 3.18.0-1 [66.3 kB] Get:3305 http://deb.debian.org/debian bookworm/main amd64 python3-mock all 4.0.3-4 [64.0 kB] Get:3306 http://deb.debian.org/debian bookworm/main amd64 python3-msal all 1.21.0-1 [85.9 kB] Get:3307 http://deb.debian.org/debian bookworm/main amd64 python3-portalocker all 2.2.1-1 [18.5 kB] Get:3308 http://deb.debian.org/debian bookworm/main amd64 python3-msal-extensions all 1.0.0-2 [16.9 kB] Get:3309 http://deb.debian.org/debian bookworm/main amd64 python3-strictyaml all 1.6.1-3 [92.9 kB] Get:3310 http://deb.debian.org/debian bookworm/main amd64 python3-tqdm all 4.64.1-1 [97.7 kB] Get:3311 http://deb.debian.org/debian bookworm/main amd64 python3-uamqp amd64 1.5.3-1+b4 [647 kB] Get:3312 http://deb.debian.org/debian bookworm/main amd64 python3-azure all 20230112+git-1 [11.9 MB] Get:3313 http://deb.debian.org/debian bookworm/main amd64 python3-bcrypt amd64 3.2.2-1 [32.2 kB] Get:3314 http://deb.debian.org/debian bookworm/main amd64 python3-nacl amd64 1.5.0-2 [59.3 kB] Get:3315 http://deb.debian.org/debian bookworm/main amd64 python3-paramiko all 2.12.0-2 [133 kB] Get:3316 http://deb.debian.org/debian bookworm/main amd64 python3-smart-open all 5.2.1-5 [87.9 kB] Get:3317 http://deb.debian.org/debian bookworm/main amd64 python3-stopit all 1.1.2-2 [12.6 kB] Get:3318 http://deb.debian.org/debian bookworm/main amd64 python3-tabulate all 0.8.9-1 [35.2 kB] Get:3319 http://deb.debian.org/debian bookworm/main amd64 python3-throttler all 1.2.2-2 [7072 B] Get:3320 http://deb.debian.org/debian bookworm/main amd64 python3-toposort all 1.9-1 [7272 B] Get:3321 http://deb.debian.org/debian bookworm/main amd64 python3-ratelimiter amd64 1.2.0.post0-4 [5740 B] Get:3322 http://deb.debian.org/debian bookworm/main amd64 snakemake all 7.21.0-1 [301 kB] Get:3323 http://deb.debian.org/debian bookworm/main amd64 trim-galore all 0.6.10-1 [17.8 MB] Get:3324 http://deb.debian.org/debian bookworm/main amd64 pigx-rnaseq all 0.1.0-1.1 [61.2 kB] Get:3325 http://deb.debian.org/debian bookworm/main amd64 piler amd64 0~20140707-3 [39.8 kB] Get:3326 http://deb.debian.org/debian bookworm/main amd64 pilercr amd64 1.06+dfsg-5 [115 kB] Get:3327 http://deb.debian.org/debian bookworm/main amd64 scala-library all 2.11.12-5 [9588 kB] Get:3328 http://deb.debian.org/debian bookworm/main amd64 pilon all 1.24-2 [497 kB] Get:3329 http://deb.debian.org/debian bookworm/main amd64 racon amd64 1.5.0-3 [3115 kB] Get:3330 http://deb.debian.org/debian bookworm/main amd64 pinfish amd64 0.1.0+ds-3 [1364 kB] Get:3331 http://deb.debian.org/debian bookworm/main amd64 plink amd64 1.07+dfsg-4+b1 [1239 kB] Get:3332 http://deb.debian.org/debian bookworm/main amd64 r-cran-fracdiff amd64 1.5-2-1 [110 kB] Get:3333 http://deb.debian.org/debian bookworm/main amd64 r-cran-lmtest amd64 0.9.40-1 [399 kB] Get:3334 http://deb.debian.org/debian bookworm/main amd64 r-cran-quadprog amd64 1.5-8-1+b1 [33.6 kB] Get:3335 http://deb.debian.org/debian bookworm/main amd64 r-cran-xts amd64 0.13.0-1 [773 kB] Get:3336 http://deb.debian.org/debian bookworm/main amd64 r-cran-ttr amd64 0.24.3-1+b1 [511 kB] Get:3337 http://deb.debian.org/debian bookworm/main amd64 r-cran-quantmod all 0.4.20-1 [1009 kB] Get:3338 http://deb.debian.org/debian bookworm/main amd64 r-cran-tseries amd64 0.10-53-1 [374 kB] Get:3339 http://deb.debian.org/debian bookworm/main amd64 r-cran-urca amd64 1.3-3-1 [1074 kB] Get:3340 http://deb.debian.org/debian bookworm/main amd64 r-cran-forecast amd64 8.20-1 [1544 kB] Get:3341 http://deb.debian.org/debian bookworm/main amd64 r-bioc-multtest amd64 2.54.0-1 [846 kB] Get:3342 http://deb.debian.org/debian bookworm/main amd64 r-cran-optparse all 1.7.3-1 [82.0 kB] Get:3343 http://deb.debian.org/debian bookworm/main amd64 r-cran-uroot all 2.1-2-1 [1908 kB] Get:3344 http://deb.debian.org/debian bookworm/main amd64 pique all 1.0-6 [20.4 kB] Get:3345 http://deb.debian.org/debian bookworm/main amd64 pirs-profiles all 2.0.2+dfsg-11 [2566 kB] Get:3346 http://deb.debian.org/debian bookworm/main amd64 pirs amd64 2.0.2+dfsg-11 [118 kB] Get:3347 http://deb.debian.org/debian bookworm/main amd64 pizzly amd64 0.37.3+ds-9 [292 kB] Get:3348 http://deb.debian.org/debian bookworm/main amd64 placnet all 1.04-1 [11.0 kB] Get:3349 http://deb.debian.org/debian bookworm/main amd64 prokka amd64 1.14.6+dfsg-4 [9968 kB] Get:3350 http://deb.debian.org/debian bookworm/main amd64 plasmidid amd64 1.6.5+dfsg-2 [47.2 kB] Get:3351 http://deb.debian.org/debian bookworm/main amd64 plasmidomics all 0.2.0-10 [7364 B] Get:3352 http://deb.debian.org/debian bookworm/main amd64 plasmidseeker amd64 1.3+dfsg-3 [27.2 kB] Get:3353 http://deb.debian.org/debian bookworm/main amd64 plast amd64 2.3.2+dfsg-10+b2 [620 kB] Get:3354 http://deb.debian.org/debian bookworm/main amd64 plink1.9 amd64 1.90~b6.26-220402-1 [891 kB] Get:3355 http://deb.debian.org/debian bookworm/main amd64 plink2 amd64 2.00~a3.5-220809+dfsg-1+b2 [2266 kB] Get:3356 http://deb.debian.org/debian bookworm/main amd64 python3-openbabel amd64 3.1.1+dfsg-9+b3 [557 kB] Get:3357 http://deb.debian.org/debian bookworm/main amd64 plip all 2.2.2+dfsg-1 [84.3 kB] Get:3358 http://deb.debian.org/debian bookworm/main amd64 poa amd64 2.0+20060928-8 [53.2 kB] Get:3359 http://deb.debian.org/debian bookworm/main amd64 pocketsphinx-en-us all 0.8+5prealpha+1-15 [24.3 MB] Get:3360 http://deb.debian.org/debian bookworm/main amd64 populations amd64 1.2.33+svn0120106+dfsg-6 [186 kB] Get:3361 http://deb.debian.org/debian bookworm/main amd64 porechop amd64 0.2.4+dfsg-4 [55.6 kB] Get:3362 http://deb.debian.org/debian bookworm/main amd64 poretools all 0.6.0+dfsg-6 [19.7 kB] Get:3363 http://deb.debian.org/debian bookworm/main amd64 prank amd64 0.0.170427+dfsg-3 [395 kB] Get:3364 http://deb.debian.org/debian bookworm/main amd64 predictnls all 1.0.20-8 [1404 kB] Get:3365 http://deb.debian.org/debian bookworm/main amd64 presto all 0.7.1-1 [75.0 kB] Get:3366 http://deb.debian.org/debian bookworm/main amd64 preview-latex-style all 12.2-1 [201 kB] Get:3367 http://deb.debian.org/debian bookworm/main amd64 prime-phylo amd64 1.0.11-10 [826 kB] Get:3368 http://deb.debian.org/debian bookworm/main amd64 prinseq-lite all 0.20.4-6 [71.2 kB] Get:3369 http://deb.debian.org/debian bookworm/main amd64 proalign amd64 0.603-5 [166 kB] Get:3370 http://deb.debian.org/debian bookworm/main amd64 probabel amd64 0.5.0+dfsg-6 [598 kB] Get:3371 http://deb.debian.org/debian bookworm/main amd64 probalign amd64 1.4-10 [70.6 kB] Get:3372 http://deb.debian.org/debian bookworm/main amd64 probcons amd64 1.12-14 [119 kB] Get:3373 http://deb.debian.org/debian bookworm/main amd64 proda amd64 1.0-13 [64.9 kB] Get:3374 http://deb.debian.org/debian bookworm/main amd64 profnet-bval amd64 1.0.22-8 [45.5 kB] Get:3375 http://deb.debian.org/debian bookworm/main amd64 profbval all 1.0.22-8 [60.2 kB] Get:3376 http://deb.debian.org/debian bookworm/main amd64 profnet-isis amd64 1.0.22-8 [96.7 kB] Get:3377 http://deb.debian.org/debian bookworm/main amd64 profisis all 1.0.11-7 [63.3 kB] Get:3378 http://deb.debian.org/debian bookworm/main amd64 profnet-chop amd64 1.0.22-8 [96.8 kB] Get:3379 http://deb.debian.org/debian bookworm/main amd64 profnet-con amd64 1.0.22-8 [97.0 kB] Get:3380 http://deb.debian.org/debian bookworm/main amd64 profnet-md amd64 1.0.22-8 [44.8 kB] Get:3381 http://deb.debian.org/debian bookworm/main amd64 profnet-prof amd64 1.0.22-8 [96.8 kB] Get:3382 http://deb.debian.org/debian bookworm/main amd64 profnet-snapfun amd64 1.0.22-8 [97.7 kB] Get:3383 http://deb.debian.org/debian bookworm/main amd64 profphd-net amd64 1.0.22-8 [143 kB] Get:3384 http://deb.debian.org/debian bookworm/main amd64 proftmb amd64 1.1.12-11 [346 kB] Get:3385 http://deb.debian.org/debian bookworm/main amd64 proj-bin amd64 9.1.1-1+b1 [206 kB] Get:3386 http://deb.debian.org/debian bookworm/main amd64 proteinortho amd64 6.1.7+dfsg-1 [265 kB] Get:3387 http://deb.debian.org/debian bookworm/main amd64 prottest all 3.4.2+dfsg-8 [349 kB] Get:3388 http://deb.debian.org/debian bookworm/main amd64 provean amd64 1.1.5+ds-2 [49.2 kB] Get:3389 http://deb.debian.org/debian bookworm/main amd64 pscan-chip amd64 1.1-3+b2 [85.6 kB] Get:3390 http://deb.debian.org/debian bookworm/main amd64 pscan-chip-data all 1.1-3 [671 kB] Get:3391 http://deb.debian.org/debian bookworm/main amd64 pscan-tfbs amd64 1.2.2-4+b2 [71.5 kB] Get:3392 http://deb.debian.org/debian bookworm/main amd64 psmisc amd64 23.6-1 [259 kB] Get:3393 http://deb.debian.org/debian bookworm/main amd64 psortb amd64 3.0.6+dfsg-3+b2 [16.4 MB] Get:3394 http://deb.debian.org/debian bookworm/main amd64 pstoedit amd64 3.78-2 [425 kB] Get:3395 http://deb.debian.org/debian bookworm/main amd64 publicsuffix all 20230209.2326-1 [126 kB] Get:3396 http://deb.debian.org/debian bookworm/main amd64 pullseq amd64 1.0.2-4 [21.9 kB] Get:3397 http://deb.debian.org/debian bookworm/main amd64 pybind11-dev all 2.10.3-1 [186 kB] Get:3398 http://deb.debian.org/debian bookworm/main amd64 pycoqc all 2.5.2+dfsg-3 [36.3 kB] Get:3399 http://deb.debian.org/debian bookworm/main amd64 python3-wxgtk4.0 amd64 4.2.0+dfsg-3 [7200 kB] Get:3400 http://deb.debian.org/debian bookworm/main amd64 python3-asteval all 0.9.28-1 [18.4 kB] Get:3401 http://deb.debian.org/debian bookworm/main amd64 python3-uncertainties all 3.1.6-1 [79.1 kB] Get:3402 http://deb.debian.org/debian bookworm/main amd64 python3-lmfit all 1.1.0-1 [76.1 kB] Get:3403 http://deb.debian.org/debian bookworm/main amd64 pycorrfit amd64 1.1.7+dfsg-2+b1 [831 kB] Get:3404 http://deb.debian.org/debian bookworm/main amd64 python3-lazy-object-proxy amd64 1.9.0-1+b1 [21.5 kB] Get:3405 http://deb.debian.org/debian bookworm/main amd64 python3-astroid all 2.14.2-1 [209 kB] Get:3406 http://deb.debian.org/debian bookworm/main amd64 python3-isort all 5.6.4-1 [63.2 kB] Get:3407 http://deb.debian.org/debian bookworm/main amd64 python3-logilab-common all 1.9.8-1 [380 kB] Get:3408 http://deb.debian.org/debian bookworm/main amd64 python3-dill all 0.3.6-1 [79.5 kB] Get:3409 http://deb.debian.org/debian bookworm/main amd64 python3-mccabe all 0.7.0-1 [10.5 kB] Get:3410 http://deb.debian.org/debian bookworm/main amd64 python3-tomlkit all 0.11.7-1 [40.5 kB] Get:3411 http://deb.debian.org/debian bookworm/main amd64 pylint all 2.16.2-2 [339 kB] Get:3412 http://deb.debian.org/debian bookworm/main amd64 python3-typechecks all 0.1.0+ds-3 [4484 B] Get:3413 http://deb.debian.org/debian bookworm/main amd64 python3-datacache all 1.2.1-1 [12.6 kB] Get:3414 http://deb.debian.org/debian bookworm/main amd64 python3-gtfparse all 1.3.0+ds-1 [10.1 kB] Get:3415 http://deb.debian.org/debian bookworm/main amd64 python3-memoized-property all 1.0.3-2 [5552 B] Get:3416 http://deb.debian.org/debian bookworm/main amd64 python3-nose all 1.3.7-9 [130 kB] Get:3417 http://deb.debian.org/debian bookworm/main amd64 python3-serializable all 0.2.1+ds-2 [8176 B] Get:3418 http://deb.debian.org/debian bookworm/main amd64 pyensembl all 2.2.4+ds-1 [35.0 kB] Get:3419 http://deb.debian.org/debian bookworm/main amd64 python3-fabio amd64 0.14.0+dfsg-2+b2 [514 kB] Get:3420 http://deb.debian.org/debian bookworm/main amd64 python3-numexpr amd64 2.8.4-1+b2 [92.2 kB] Get:3421 http://deb.debian.org/debian bookworm/main amd64 python3-mako all 1.2.4+ds-1 [81.9 kB] Get:3422 http://deb.debian.org/debian bookworm/main amd64 python3-opengl all 3.1.6+dfsg-3 [605 kB] Get:3423 http://deb.debian.org/debian bookworm/main amd64 python3-pytools all 2022.1.14-2 [53.4 kB] Get:3424 http://deb.debian.org/debian bookworm/main amd64 python3-pyopencl amd64 2022.3.1-2.1 [472 kB] Get:3425 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtopengl amd64 5.15.9+dfsg-1 [206 kB] Get:3426 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtsvg amd64 5.15.9+dfsg-1 [122 kB] Get:3427 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtchart amd64 5.15.6+dfsg-1 [140 kB] Get:3428 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtmultimedia amd64 5.15.9+dfsg-1 [299 kB] Get:3429 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtpositioning amd64 5.15.9+dfsg-1 [235 kB] Get:3430 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtquick amd64 5.15.9+dfsg-1 [434 kB] Get:3431 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtremoteobjects amd64 5.15.9+dfsg-1 [127 kB] Get:3432 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtsensors amd64 5.15.9+dfsg-1 [145 kB] Get:3433 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtserialport amd64 5.15.9+dfsg-1 [121 kB] Get:3434 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtsql amd64 5.15.9+dfsg-1 [179 kB] Get:3435 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qttexttospeech amd64 5.15.9+dfsg-1 [111 kB] Get:3436 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtwebchannel amd64 5.15.9+dfsg-1 [109 kB] Get:3437 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtwebkit amd64 5.15.9+dfsg-1 [197 kB] Get:3438 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtwebsockets amd64 5.15.9+dfsg-1 [120 kB] Get:3439 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtxmlpatterns amd64 5.15.9+dfsg-1 [136 kB] Get:3440 http://deb.debian.org/debian bookworm/main amd64 python3-qtpy all 2.3.0-1 [59.2 kB] Get:3441 http://deb.debian.org/debian bookworm/main amd64 python3-qtconsole all 5.4.0-1 [80.0 kB] Get:3442 http://deb.debian.org/debian bookworm/main amd64 python3-silx amd64 1.1.0+dfsg-5 [2273 kB] Get:3443 http://deb.debian.org/debian bookworm/main amd64 python3-pyfai amd64 0.21.3+dfsg1-4 [2364 kB] Get:3444 http://deb.debian.org/debian bookworm/main amd64 pyfai all 0.21.3+dfsg1-4 [14.6 kB] Get:3445 http://deb.debian.org/debian bookworm/main amd64 pyfastx amd64 0.8.4-2 [126 kB] Get:3446 http://deb.debian.org/debian bookworm/main amd64 pymol-data all 2.5.0+dfsg-1 [1401 kB] Get:3447 http://deb.debian.org/debian bookworm/main amd64 python3-pymol amd64 2.5.0+dfsg-1+b3 [3703 kB] Get:3448 http://deb.debian.org/debian bookworm/main amd64 pymol all 2.5.0+dfsg-1 [189 kB] Get:3449 http://deb.debian.org/debian bookworm/main amd64 python3-configobj all 5.0.8-1 [34.5 kB] Get:3450 http://deb.debian.org/debian bookworm/main amd64 python3-pluggy all 1.0.0+repack-1 [19.7 kB] Get:3451 http://deb.debian.org/debian bookworm/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get:3452 http://deb.debian.org/debian bookworm/main amd64 python3-pytest all 7.2.1-2 [236 kB] Get:3453 http://deb.debian.org/debian bookworm/main amd64 python3-hypothesis all 6.67.1-1 [270 kB] Get:3454 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-arraydiff all 0.5.0-2 [9656 B] Get:3455 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-astropy-header all 0.2.2-1 [8676 B] Get:3456 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-cov all 4.0.0-1 [26.1 kB] Get:3457 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-doctestplus all 0.12.1-1 [20.8 kB] Get:3458 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-filter-subpackage all 0.1.2-1 [5992 B] Get:3459 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-mock all 3.8.2-3 [16.5 kB] Get:3460 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-openfiles all 0.5.0-3 [7536 B] Get:3461 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-remotedata all 0.4.0-1 [9280 B] Get:3462 http://deb.debian.org/debian bookworm/main amd64 python3-pytest-astropy all 0.10.0-2 [6580 B] Get:3463 http://deb.debian.org/debian bookworm/main amd64 python3-erfa amd64 2.0.0.1+ds-3+b1 [307 kB] Get:3464 http://deb.debian.org/debian bookworm/main amd64 python3-astropy amd64 5.2.1-2 [3457 kB] Get:3465 http://deb.debian.org/debian bookworm/main amd64 python3-multipletau all 0.3.3+ds-4 [13.0 kB] Get:3466 http://deb.debian.org/debian bookworm/main amd64 python3-tifffile all 20230203-1 [175 kB] Get:3467 http://deb.debian.org/debian bookworm/main amd64 pyscanfcs amd64 0.3.6+ds-4+b1 [513 kB] Get:3468 http://deb.debian.org/debian bookworm/main amd64 python-biopython-doc all 1.80+dfsg-4 [16.1 MB] Get:3469 http://deb.debian.org/debian bookworm/main amd64 python-cobra-data all 0.26.2-1 [1436 kB] Get:3470 http://deb.debian.org/debian bookworm/main amd64 python-mako-doc all 1.2.4+ds-1 [194 kB] Get:3471 http://deb.debian.org/debian bookworm/main amd64 python-odf-doc all 1.4.2-2 [213 kB] Get:3472 http://deb.debian.org/debian bookworm/main amd64 python3-odf all 1.4.2-2 [78.0 kB] Get:3473 http://deb.debian.org/debian bookworm/main amd64 python-odf-tools all 1.4.2-2 [28.1 kB] Get:3474 http://deb.debian.org/debian bookworm/main amd64 python-pyopencl-doc all 2022.3.1-2.1 [295 kB] Get:3475 http://deb.debian.org/debian bookworm/main amd64 python-tables-data all 3.7.0-5 [47.2 kB] Get:3476 http://deb.debian.org/debian bookworm/main amd64 python3-natsort all 8.0.2-2 [39.0 kB] Get:3477 http://deb.debian.org/debian bookworm/main amd64 python3-anndata all 0.8.0-4 [347 kB] Get:3478 http://deb.debian.org/debian bookworm/main amd64 python3-antlr4 all 4.9.1-1 [137 kB] Get:3479 http://deb.debian.org/debian bookworm/main amd64 python3-sniffio all 1.2.0-1 [6372 B] Get:3480 http://deb.debian.org/debian bookworm/main amd64 python3-anyio all 3.6.2-1 [54.0 kB] Get:3481 http://deb.debian.org/debian bookworm/main amd64 python3-argh all 0.26.2-2 [25.3 kB] Get:3482 http://deb.debian.org/debian bookworm/main amd64 python3-asciitree all 0.3.3-3 [5464 B] Get:3483 http://deb.debian.org/debian bookworm/main amd64 python3-asgiref all 3.6.0-1 [27.6 kB] Get:3484 http://deb.debian.org/debian bookworm/main amd64 python3-astunparse all 1.6.3-2 [13.8 kB] Get:3485 http://deb.debian.org/debian bookworm/main amd64 python3-multisplitby all 0.0.1-6 [4688 B] Get:3486 http://deb.debian.org/debian bookworm/main amd64 python3-requests-file all 1.5.1-1 [5708 B] Get:3487 http://deb.debian.org/debian bookworm/main amd64 python3-bel-resources all 0.0.3-4 [13.5 kB] Get:3488 http://deb.debian.org/debian bookworm/main amd64 python3-bibtexparser all 1.1.0+ds-5 [31.8 kB] Get:3489 http://deb.debian.org/debian bookworm/main amd64 python3-bioframe all 0.3.3-2 [69.9 kB] Get:3490 http://deb.debian.org/debian bookworm/main amd64 python3-elasticsearch all 7.17.6-1 [113 kB] Get:3491 http://deb.debian.org/debian bookworm/main amd64 python3-biomaj3-core all 3.0.28-1 [25.3 kB] Get:3492 http://deb.debian.org/debian bookworm/main amd64 python3-biomaj3-cli all 3.1.11-4 [18.9 kB] Get:3493 http://deb.debian.org/debian bookworm/main amd64 python3-thriftpy amd64 0.3.9+ds1-2+b3 [122 kB] Get:3494 http://deb.debian.org/debian bookworm/main amd64 python3-py-zipkin all 0.15.0-2 [28.8 kB] Get:3495 http://deb.debian.org/debian bookworm/main amd64 python3-biomaj3-zipkin all 0.2.2-3 [15.1 kB] Get:3496 http://deb.debian.org/debian bookworm/main amd64 python3-consul all 0.7.1-2 [23.8 kB] Get:3497 http://deb.debian.org/debian bookworm/main amd64 python3-itsdangerous all 2.1.2-3 [17.0 kB] Get:3498 http://deb.debian.org/debian bookworm/main amd64 python3-werkzeug all 2.2.2-3 [205 kB] Get:3499 http://deb.debian.org/debian bookworm/main amd64 python3-flask all 2.2.2-3 [105 kB] Get:3500 http://deb.debian.org/debian bookworm/main amd64 python3-ftputil all 5.0.4-1 [39.8 kB] Get:3501 http://deb.debian.org/debian bookworm/main amd64 python3-prettytable all 3.6.0-1 [36.0 kB] Get:3502 http://deb.debian.org/debian bookworm/main amd64 python3-irodsclient all 0.8.1-3 [72.3 kB] Get:3503 http://deb.debian.org/debian bookworm/main amd64 python3-pika all 1.2.0-1 [125 kB] Get:3504 http://deb.debian.org/debian bookworm/main amd64 python3-protobuf amd64 3.21.12-3 [245 kB] Get:3505 http://deb.debian.org/debian bookworm/main amd64 python3-pycurl amd64 7.45.2-3 [67.7 kB] Get:3506 http://deb.debian.org/debian bookworm/main amd64 python3-redis all 4.3.4-3 [188 kB] Get:3507 http://deb.debian.org/debian bookworm/main amd64 python3-simpleeval all 0.9.12-1 [22.2 kB] Get:3508 http://deb.debian.org/debian bookworm/main amd64 python3-biomaj3-download all 3.2.9-1 [51.0 kB] Get:3509 http://deb.debian.org/debian bookworm/main amd64 python3-biomaj3-process all 3.0.19-1 [26.2 kB] Get:3510 http://deb.debian.org/debian bookworm/main amd64 python3-pyasn1 all 0.4.8-3 [62.2 kB] Get:3511 http://deb.debian.org/debian bookworm/main amd64 python3-ldap3 all 2.9.1-2 [235 kB] Get:3512 http://deb.debian.org/debian bookworm/main amd64 python3-bson amd64 3.11.0-1+b5 [66.7 kB] Get:3513 http://deb.debian.org/debian bookworm/main amd64 python3-pymongo amd64 3.11.0-1+b5 [210 kB] Get:3514 http://deb.debian.org/debian bookworm/main amd64 python3-biomaj3-user all 3.0.12-1 [19.8 kB] Get:3515 http://deb.debian.org/debian bookworm/main amd64 python3-influxdb all 5.3.1-3 [52.2 kB] Get:3516 http://deb.debian.org/debian bookworm/main amd64 python3-yapsy all 1.12.0-1.3 [31.0 kB] Get:3517 http://deb.debian.org/debian bookworm/main amd64 python3-biomaj3 all 3.1.23-1 [65.1 kB] Get:3518 http://deb.debian.org/debian bookworm/main amd64 python3-flask-cors all 3.0.10-2 [43.3 kB] Get:3519 http://deb.debian.org/debian bookworm/main amd64 python3-biomaj3-daemon all 3.0.24-2 [30.7 kB] Get:3520 http://deb.debian.org/debian bookworm/main amd64 python3-biotools all 1.2.12-5 [28.9 kB] Get:3521 http://deb.debian.org/debian bookworm/main amd64 python3-blessed all 1.19.1-1 [53.7 kB] Get:3522 http://deb.debian.org/debian bookworm/main amd64 python3-blosc amd64 1.11.1+ds1-1+b1 [38.4 kB] Get:3523 http://deb.debian.org/debian bookworm/main amd64 python3-boto all 2.49.0-4.1 [734 kB] Get:3524 http://deb.debian.org/debian bookworm/main amd64 python3-bottleneck amd64 1.3.5+ds1-2+b1 [86.8 kB] Get:3525 http://deb.debian.org/debian bookworm/main amd64 python3-bson-ext amd64 3.11.0-1+b5 [54.4 kB] Get:3526 http://deb.debian.org/debian bookworm/main amd64 python3-lzo amd64 1.14-1+b3 [7712 B] Get:3527 http://deb.debian.org/debian bookworm/main amd64 python3-bx amd64 0.9.0-1+b2 [1926 kB] Get:3528 http://deb.debian.org/debian bookworm/main amd64 python3-cachetools all 5.2.0-1 [13.0 kB] Get:3529 http://deb.debian.org/debian bookworm/main amd64 python3-cgecore all 1.5.6+ds-1 [28.7 kB] Get:3530 http://deb.debian.org/debian bookworm/main amd64 python3-cgelib all 0.7.3-2 [46.6 kB] Get:3531 http://deb.debian.org/debian bookworm/main amd64 python3-click-plugins all 1.1.1-4 [9852 B] Get:3532 http://deb.debian.org/debian bookworm/main amd64 python3-cloudpickle all 2.2.0-1 [23.6 kB] Get:3533 http://deb.debian.org/debian bookworm/main amd64 python3-depinfo amd64 2.2.0-1 [11.6 kB] Get:3534 http://deb.debian.org/debian bookworm/main amd64 python3-diskcache all 5.4.0-1 [33.7 kB] Get:3535 http://deb.debian.org/debian bookworm/main amd64 python3-h11 all 0.14.0-1 [50.1 kB] Get:3536 http://deb.debian.org/debian bookworm/main amd64 python3-httpcore all 0.16.3-1 [38.4 kB] Get:3537 http://deb.debian.org/debian bookworm/main amd64 python3-rfc3986 all 1.5.0-2 [22.2 kB] Get:3538 http://deb.debian.org/debian bookworm/main amd64 python3-httpx all 0.23.3-1 [72.3 kB] Get:3539 http://deb.debian.org/debian bookworm/main amd64 python3-swiglpk amd64 4.65.1-1+b4 [62.6 kB] Get:3540 http://deb.debian.org/debian bookworm/main amd64 python3-optlang all 1.5.2-1 [81.2 kB] Get:3541 http://deb.debian.org/debian bookworm/main amd64 python3-pydantic all 1.10.4-1 [171 kB] Get:3542 http://deb.debian.org/debian bookworm/main amd64 swig4.0 amd64 4.1.0-0.2 [1388 kB] Get:3543 http://deb.debian.org/debian bookworm/main amd64 swig all 4.1.0-0.2 [321 kB] Get:3544 http://deb.debian.org/debian bookworm/main amd64 python3-sbml5 amd64 5.19.7+dfsg-2 [3472 kB] Get:3545 http://deb.debian.org/debian bookworm/main amd64 python3-cobra amd64 0.26.2-1 [1119 kB] Get:3546 http://deb.debian.org/debian bookworm/main amd64 python3-llvmlite amd64 0.39.1-2 [139 kB] Get:3547 http://deb.debian.org/debian bookworm/main amd64 python3-numba amd64 0.56.4+dfsg-2 [1695 kB] Get:3548 http://deb.debian.org/debian bookworm/main amd64 python3-scitrack all 2021.5.3-3 [9272 B] Get:3549 http://deb.debian.org/debian bookworm/main amd64 python3-tinydb all 3.15.2-4 [20.8 kB] Get:3550 http://deb.debian.org/debian bookworm/main amd64 python3-cogent3 amd64 2023.2.12a1+dfsg-2+deb12u1 [1896 kB] Get:3551 http://deb.debian.org/debian bookworm/main amd64 python3-toolz all 0.12.0-1 [43.3 kB] Get:3552 http://deb.debian.org/debian bookworm/main amd64 python3-cytoolz amd64 0.12.0-1+b1 [250 kB] Get:3553 http://deb.debian.org/debian bookworm/main amd64 python3-multiprocess all 0.70.12.2-1 [103 kB] Get:3554 http://deb.debian.org/debian bookworm/main amd64 python3-pairix amd64 0.3.7-6+b1 [41.3 kB] Get:3555 http://deb.debian.org/debian bookworm/main amd64 python3-cooler amd64 0.9.1-1 [85.7 kB] Get:3556 http://deb.debian.org/debian bookworm/main amd64 python3-corepywrap amd64 1.005-11+b1 [207 kB] Get:3557 http://deb.debian.org/debian bookworm/main amd64 python3-cpuinfo all 5.0.0-5 [19.2 kB] Get:3558 http://deb.debian.org/debian bookworm/main amd64 python3-cyvcf2 amd64 0.30.18-1+b2 [803 kB] Get:3559 http://deb.debian.org/debian bookworm/main amd64 python3-fsspec all 2022.11.0-1 [100 kB] Get:3560 http://deb.debian.org/debian bookworm/main amd64 python3-locket all 1.0.0-1 [5804 B] Get:3561 http://deb.debian.org/debian bookworm/main amd64 python3-partd all 1.3.0-1 [15.1 kB] Get:3562 http://deb.debian.org/debian bookworm/main amd64 python3-dask all 2022.12.1+dfsg-2 [865 kB] Get:3563 http://deb.debian.org/debian bookworm/main amd64 python3-tblib all 1.7.0-3 [13.2 kB] Get:3564 http://deb.debian.org/debian bookworm/main amd64 python3-heapdict all 1.0.1-2 [5404 B] Get:3565 http://deb.debian.org/debian bookworm/main amd64 python3-zict all 2.2.0-1 [16.7 kB] Get:3566 http://deb.debian.org/debian bookworm/main amd64 python3-distributed all 2022.12.1+ds.1-3 [1029 kB] Get:3567 http://deb.debian.org/debian bookworm/main amd64 python3-distro all 1.8.0-1 [20.5 kB] Get:3568 http://deb.debian.org/debian bookworm/main amd64 python3.11-doc all 3.11.2-6 [12.6 MB] Get:3569 http://deb.debian.org/debian bookworm/main amd64 python3-doc all 3.11.2-1 [9208 B] Get:3570 http://deb.debian.org/debian bookworm/main amd64 python3-websocket all 1.2.3-1 [40.4 kB] Get:3571 http://deb.debian.org/debian bookworm/main amd64 python3-docker all 5.0.3-1 [90.2 kB] Get:3572 http://deb.debian.org/debian bookworm/main amd64 python3-dotenv all 0.21.0-1 [24.9 kB] Get:3573 http://deb.debian.org/debian bookworm/main amd64 python3-stone all 3.3.1-2 [117 kB] Get:3574 http://deb.debian.org/debian bookworm/main amd64 python3-dropbox all 11.34.0-1 [419 kB] Get:3575 http://deb.debian.org/debian bookworm/main amd64 python3-edlib amd64 1.2.7-4+b1 [59.6 kB] Get:3576 http://deb.debian.org/debian bookworm/main amd64 python3-hdmedians amd64 0.14.2-5+b1 [100 kB] Get:3577 http://deb.debian.org/debian bookworm/main amd64 python3-lockfile all 1:0.12.2-2.2 [17.3 kB] Get:3578 http://deb.debian.org/debian bookworm/main amd64 python3-skbio amd64 0.5.8-4 [727 kB] Get:3579 http://deb.debian.org/debian bookworm/main amd64 python3-emperor all 1.0.3+ds-7 [155 kB] Get:3580 http://deb.debian.org/debian bookworm/main amd64 python3-prefixed all 0.7.0-1 [7984 B] Get:3581 http://deb.debian.org/debian bookworm/main amd64 python3-enlighten amd64 1.11.2-1 [41.4 kB] Get:3582 http://deb.debian.org/debian bookworm/main amd64 python3-ete3 all 3.1.2+dfsg-3 [374 kB] Get:3583 http://deb.debian.org/debian bookworm/main amd64 python3-fast5 amd64 0.6.5-7+b3 [227 kB] Get:3584 http://deb.debian.org/debian bookworm/main amd64 python3-public all 2.3-4 [24.7 kB] Get:3585 http://deb.debian.org/debian bookworm/main amd64 python3-flufl.lock all 5.0.1-4 [16.2 kB] Get:3586 http://deb.debian.org/debian bookworm/main amd64 python3-freecontact amd64 1.1-6+b4 [73.2 kB] Get:3587 http://deb.debian.org/debian bookworm/main amd64 python3-fusepy all 3.0.1-2 [11.2 kB] Get:3588 http://deb.debian.org/debian bookworm/main amd64 python3-gdal amd64 3.6.2+dfsg-1+b2 [938 kB] Get:3589 http://deb.debian.org/debian bookworm/main amd64 python3-geneimpacts all 0.3.7-4 [33.7 kB] Get:3590 http://deb.debian.org/debian bookworm/main amd64 python3-greenlet amd64 2.0.2-1 [142 kB] Get:3591 http://deb.debian.org/debian bookworm/main amd64 python3-zope.event all 4.4-3 [9420 B] Get:3592 http://deb.debian.org/debian bookworm/main amd64 python3-zope.interface amd64 5.5.2-1+b1 [152 kB] Get:3593 http://deb.debian.org/debian bookworm/main amd64 python3-gevent amd64 22.10.2-3 [748 kB] Get:3594 http://deb.debian.org/debian bookworm/main amd64 python3-gfapy amd64 1.2.3+dfsg-2 [76.8 kB] Get:3595 http://deb.debian.org/debian bookworm/main amd64 python3-gffutils all 0.11.1-3 [1035 kB] Get:3596 http://deb.debian.org/debian bookworm/main amd64 python3-pyasn1-modules all 0.2.8-1 [72.0 kB] Get:3597 http://deb.debian.org/debian bookworm/main amd64 python3-rsa all 4.8-1 [31.1 kB] Get:3598 http://deb.debian.org/debian bookworm/main amd64 python3-google-auth all 1.5.1-3 [38.9 kB] Get:3599 http://deb.debian.org/debian bookworm/main amd64 python3-gridfs all 3.11.0-1 [48.4 kB] Get:3600 http://deb.debian.org/debian bookworm/main amd64 python3-hisat2 all 2.2.1-4 [13.9 kB] Get:3601 http://deb.debian.org/debian bookworm/main amd64 python3-ijson amd64 3.2.0-1 [37.5 kB] Get:3602 http://deb.debian.org/debian bookworm/main amd64 python3-invoke all 2.0.0-1 [122 kB] Get:3603 http://deb.debian.org/debian bookworm/main amd64 python3-iow amd64 1.0.6-2 [316 kB] Get:3604 http://deb.debian.org/debian bookworm/main amd64 python3-widgetsnbextension all 6.0.0-11 [6168 B] Get:3605 http://deb.debian.org/debian bookworm/main amd64 python3-ipywidgets all 6.0.0-11 [31.8 kB] Get:3606 http://deb.debian.org/debian bookworm/main amd64 python3-json-pointer all 2.3-2 [15.1 kB] Get:3607 http://deb.debian.org/debian bookworm/main amd64 python3-kubernetes all 22.6.0-2 [377 kB] Get:3608 http://deb.debian.org/debian bookworm/main amd64 python3-libarchive-c all 2.9-0.1 [14.5 kB] Get:3609 http://deb.debian.org/debian bookworm/main amd64 python3-libcloud all 3.4.1-5 [808 kB] Get:3610 http://deb.debian.org/debian bookworm/main amd64 python3-numpy-groupies all 0.9.20-1 [21.0 kB] Get:3611 http://deb.debian.org/debian bookworm/main amd64 python3-loompy amd64 3.0.7+dfsg-2 [40.7 kB] Get:3612 http://deb.debian.org/debian bookworm/main amd64 python3-mofapy all 1.6.1+dfsg-10 [34.4 kB] Get:3613 http://deb.debian.org/debian bookworm/main amd64 python3-ncls amd64 0.0.63-hotfix+ds-1+b3 [330 kB] Get:3614 http://deb.debian.org/debian bookworm/main amd64 python3-ngs all 3.0.3+dfsg-6~deb12u1 [42.3 kB] Get:3615 http://deb.debian.org/debian bookworm/main amd64 python3-olefile all 0.46-3 [36.1 kB] Get:3616 http://deb.debian.org/debian bookworm/main amd64 python3-openssl all 23.0.0-1 [50.8 kB] Get:3617 http://deb.debian.org/debian bookworm/main amd64 python3-pairtools amd64 1.0.2-2+b1 [165 kB] Get:3618 http://deb.debian.org/debian bookworm/main amd64 python3-pangolearn all 2022-07-09+dfsg-2 [43.9 MB] Get:3619 http://deb.debian.org/debian bookworm/main amd64 python3-parasail all 1.3.3-1 [38.6 kB] Get:3620 http://deb.debian.org/debian bookworm/main amd64 python3-patsy all 0.5.3-1 [173 kB] Get:3621 http://deb.debian.org/debian bookworm/main amd64 python3-pbconsensuscore amd64 1.1.1+dfsg-4+b1 [699 kB] Get:3622 http://deb.debian.org/debian bookworm/main amd64 python3-peptidebuilder all 1.1.0-3 [12.8 kB] Get:3623 http://deb.debian.org/debian bookworm/main amd64 python3-pip all 23.0.1+dfsg-1 [1325 kB] Get:3624 http://deb.debian.org/debian bookworm/main amd64 python3-pubsub all 4.0.3-7 [46.7 kB] Get:3625 http://deb.debian.org/debian bookworm/main amd64 python3-pyabpoa amd64 1.4.1-3+b4 [146 kB] Get:3626 http://deb.debian.org/debian bookworm/main amd64 python3-pyani amd64 0.2.12-2 [48.1 kB] Get:3627 http://deb.debian.org/debian bookworm/main amd64 python3-sqlalchemy all 1.4.46+ds1-1 [1008 kB] Get:3628 http://deb.debian.org/debian bookworm/main amd64 python3-pybel all 0.14.10-1 [223 kB] Get:3629 http://deb.debian.org/debian bookworm/main amd64 python3-pybind11 all 2.10.3-1 [199 kB] Get:3630 http://deb.debian.org/debian bookworm/main amd64 python3-pygit2 amd64 1.11.1-3 [159 kB] Get:3631 http://deb.debian.org/debian bookworm/main amd64 python3-pygraphviz amd64 1.7-3+b4 [75.1 kB] Get:3632 http://deb.debian.org/debian bookworm/main amd64 python3-pyinotify all 0.9.6-2 [27.4 kB] Get:3633 http://deb.debian.org/debian bookworm/main amd64 python3-pymongo-ext amd64 3.11.0-1+b5 [45.6 kB] Get:3634 http://deb.debian.org/debian bookworm/main amd64 python3-pynndescent amd64 0.5.8-2 [42.6 kB] Get:3635 http://deb.debian.org/debian bookworm/main amd64 python3-pyqt5.qtwebengine amd64 5.15.6-1 [112 kB] Get:3636 http://deb.debian.org/debian bookworm/main amd64 python3-pyrle amd64 0.0.33-4+b2 [242 kB] Get:3637 http://deb.debian.org/debian bookworm/main amd64 python3-sorted-nearest amd64 0.0.38+dfsg-1 [437 kB] Get:3638 http://deb.debian.org/debian bookworm/main amd64 python3-pyranges all 0.0.111+ds-4 [438 kB] Get:3639 http://deb.debian.org/debian bookworm/main amd64 python3-pyspoa amd64 0.0.8-3+b2 [51.1 kB] Get:3640 http://deb.debian.org/debian bookworm/main amd64 rdkit-data all 202209.3-1 [13.1 MB] Get:3641 http://deb.debian.org/debian bookworm/main amd64 python3-rdkit amd64 202209.3-1 [4345 kB] Get:3642 http://deb.debian.org/debian bookworm/main amd64 python3-regex amd64 0.1.20221031-1+b1 [266 kB] Get:3643 http://deb.debian.org/debian bookworm/main amd64 python3-rfc3987 all 1.3.8-2 [8816 B] Get:3644 http://deb.debian.org/debian bookworm/main amd64 python3-ruffus all 2.8.4-5 [151 kB] Get:3645 http://deb.debian.org/debian bookworm/main amd64 python3-shasta amd64 0.11.1-1+b1 [2009 kB] Get:3646 http://deb.debian.org/debian bookworm/main amd64 python3-sklearn-pandas all 2.2.0-1.1 [18.7 kB] Get:3647 http://deb.debian.org/debian bookworm/main amd64 python3-slow5 amd64 0.7.0+dfsg-2+b1 [427 kB] Get:3648 http://deb.debian.org/debian bookworm/main amd64 python3-sparqlwrapper all 1.8.5-2 [35.5 kB] Get:3649 http://deb.debian.org/debian bookworm/main amd64 python3-sqlalchemy-ext amd64 1.4.46+ds1-1+b1 [17.1 kB] Get:3650 http://deb.debian.org/debian bookworm/main amd64 python3-sqt amd64 0.8.0-6+b1 [119 kB] Get:3651 http://deb.debian.org/debian bookworm/main amd64 python3-statsmodels-lib amd64 0.13.5+dfsg-7 [1292 kB] Get:3652 http://deb.debian.org/debian bookworm/main amd64 python3-statsmodels all 0.13.5+dfsg-7 [4515 kB] Get:3653 http://deb.debian.org/debian bookworm/main amd64 python3-streamz all 0.6.4-1 [95.0 kB] Get:3654 http://deb.debian.org/debian bookworm/main amd64 python3-tables-lib amd64 3.7.0-5+b1 [378 kB] Get:3655 http://deb.debian.org/debian bookworm/main amd64 python3-tables all 3.7.0-5 [339 kB] Get:3656 http://deb.debian.org/debian bookworm/main amd64 python3-tinyalign amd64 0.2.1-1+b3 [17.0 kB] Get:3657 http://deb.debian.org/debian bookworm/main amd64 python3-torch amd64 1.13.1+dfsg-4 [9044 kB] Get:3658 http://deb.debian.org/debian bookworm/main amd64 python3-unifrac amd64 1.2-3+b1 [122 kB] Get:3659 http://deb.debian.org/debian bookworm/main amd64 python3-upsetplot all 0.8.0-1 [23.1 kB] Get:3660 http://deb.debian.org/debian bookworm/main amd64 python3-uritemplate all 4.1.1-2 [10.9 kB] Get:3661 http://deb.debian.org/debian bookworm/main amd64 python3-wdlparse all 0.1.0-3 [66.1 kB] Get:3662 http://deb.debian.org/debian bookworm/main amd64 python3-webcolors all 1.11.1-1 [12.7 kB] Get:3663 http://deb.debian.org/debian bookworm/main amd64 python3-yappi amd64 1.4.0-1+b1 [31.5 kB] Get:3664 http://deb.debian.org/debian bookworm/main amd64 pyvcf all 0.6.8+git20170215.476169c-9 [11.0 kB] Get:3665 http://deb.debian.org/debian bookworm/main amd64 qiime all 2022.11.1-2 [183 kB] Get:3666 http://deb.debian.org/debian bookworm/main amd64 q2-types all 2022.11.1-2 [78.2 kB] Get:3667 http://deb.debian.org/debian bookworm/main amd64 q2-cutadapt amd64 2022.11.1-2 [2305 kB] Get:3668 http://deb.debian.org/debian bookworm/main amd64 q2templates all 2022.11.1+ds-2 [12.6 kB] Get:3669 http://deb.debian.org/debian bookworm/main amd64 q2-demux all 2022.11.1+dfsg-2 [99.7 kB] Get:3670 http://deb.debian.org/debian bookworm/main amd64 vsearch amd64 2.22.1-1 [378 kB] Get:3671 http://deb.debian.org/debian bookworm/main amd64 q2-taxa all 2022.11.1+dfsg-2 [44.0 kB] Get:3672 http://deb.debian.org/debian bookworm/main amd64 q2-quality-control all 2022.11.1-2 [248 kB] Get:3673 http://deb.debian.org/debian bookworm/main amd64 q2-feature-table all 2022.11.1+dfsg-2 [184 kB] Get:3674 http://deb.debian.org/debian bookworm/main amd64 q2-feature-classifier all 2022.11.1-2 [118 kB] Get:3675 http://deb.debian.org/debian bookworm/main amd64 q2-metadata amd64 2022.8.0-1 [14.3 kB] Get:3676 http://deb.debian.org/debian bookworm/main amd64 q2-quality-filter all 2022.11.1-2 [22.4 kB] Get:3677 http://deb.debian.org/debian bookworm/main amd64 q2cli all 2022.11.1-2 [49.6 kB] Get:3678 http://deb.debian.org/debian bookworm/main amd64 qcat all 1.1.0-6 [31.2 kB] Get:3679 http://deb.debian.org/debian bookworm/main amd64 r-bioc-savr all 1.36.0-2 [608 kB] Get:3680 http://deb.debian.org/debian bookworm/main amd64 qcumber all 2.3.0-2 [50.5 kB] Get:3681 http://deb.debian.org/debian bookworm/main amd64 qt5-gtk-platformtheme amd64 5.15.8+dfsg-11 [125 kB] Get:3682 http://deb.debian.org/debian bookworm/main amd64 qt6-gtk-platformtheme amd64 6.4.2+dfsg-10 [57.0 kB] Get:3683 http://deb.debian.org/debian bookworm/main amd64 qt6-qpa-plugins amd64 6.4.2+dfsg-10 [88.1 kB] Get:3684 http://deb.debian.org/debian bookworm/main amd64 qt6-translations-l10n all 6.4.2-1 [1647 kB] Get:3685 http://deb.debian.org/debian bookworm/main amd64 qtltools amd64 1.3.1+dfsg-4 [904 kB] Get:3686 http://deb.debian.org/debian bookworm/main amd64 qtspeech5-speechd-plugin amd64 5.15.8-2 [16.1 kB] Get:3687 http://deb.debian.org/debian bookworm/main amd64 qttranslations5-l10n all 5.15.8-2 [1834 kB] Get:3688 http://deb.debian.org/debian bookworm/main amd64 qtwayland5 amd64 5.15.8-2 [204 kB] Get:3689 http://deb.debian.org/debian bookworm/main amd64 quicktree amd64 2.5-5 [21.0 kB] Get:3690 http://deb.debian.org/debian bookworm/main amd64 quorum amd64 1.1.1-7 [115 kB] Get:3691 http://deb.debian.org/debian bookworm/main amd64 qutemol amd64 0.4.1~cvs20081111-15 [279 kB] Get:3692 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatial amd64 7.3-16-1 [128 kB] Get:3693 http://deb.debian.org/debian bookworm/main amd64 r-recommended all 4.2.2.20221110-2 [2580 B] Get:3694 http://deb.debian.org/debian bookworm/main amd64 r-base all 4.2.2.20221110-2 [13.2 kB] Get:3695 http://deb.debian.org/debian bookworm/main amd64 xauth amd64 1:1.1.2-1 [36.0 kB] Get:3696 http://deb.debian.org/debian bookworm/main amd64 r-base-dev all 4.2.2.20221110-2 [4492 B] Get:3697 http://deb.debian.org/debian bookworm/main amd64 r-base-html all 4.2.2.20221110-2 [61.0 kB] Get:3698 http://deb.debian.org/debian bookworm/main amd64 r-bioc-annotationfilter all 1.22.0+dfsg-1 [234 kB] Get:3699 http://deb.debian.org/debian bookworm/main amd64 r-cran-r.methodss3 all 1.8.2-1 [84.5 kB] Get:3700 http://deb.debian.org/debian bookworm/main amd64 r-cran-r.oo all 1.25.0-1 [959 kB] Get:3701 http://deb.debian.org/debian bookworm/main amd64 r-cran-r.utils all 2.12.2-1 [1391 kB] Get:3702 http://deb.debian.org/debian bookworm/main amd64 r-bioc-aroma.light all 3.28.0-1 [590 kB] Get:3703 http://deb.debian.org/debian bookworm/main amd64 r-bioc-beachmat amd64 2.14.0+ds-1 [188 kB] Get:3704 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biocbaseutils all 1.0.0+dfsg-2 [30.8 kB] Get:3705 http://deb.debian.org/debian bookworm/main amd64 r-cran-assertthat all 0.2.1-2 [56.5 kB] Get:3706 http://deb.debian.org/debian bookworm/main amd64 r-cran-dbplyr all 2.3.0+dfsg-1 [1055 kB] Get:3707 http://deb.debian.org/debian bookworm/main amd64 r-cran-filelock amd64 1.0.2-2 [24.6 kB] Get:3708 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biocfilecache all 2.6.1+dfsg-1 [296 kB] Get:3709 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcpphnsw amd64 0.4.1+ds-2 [147 kB] Get:3710 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biocneighbors amd64 1.16.0+ds-1 [582 kB] Get:3711 http://deb.debian.org/debian bookworm/main amd64 r-bioc-scaledmatrix all 1.6.0+dfsg-1 [308 kB] Get:3712 http://deb.debian.org/debian bookworm/main amd64 r-cran-irlba amd64 2.3.5.1-1 [295 kB] Get:3713 http://deb.debian.org/debian bookworm/main amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] Get:3714 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biocsingular amd64 1.14.0+ds-2 [345 kB] Get:3715 http://deb.debian.org/debian bookworm/main amd64 r-cran-bookdown all 0.32+dfsg-1 [1394 kB] Get:3716 http://deb.debian.org/debian bookworm/main amd64 r-cran-biocmanager all 1.30.20+dfsg-1 [126 kB] Get:3717 http://deb.debian.org/debian bookworm/main amd64 texlive-bibtex-extra all 2022.20230122-4 [75.6 MB] Get:3718 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biocstyle all 2.26.0+dfsg-1 [435 kB] Get:3719 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biocversion all 3.16.0-1 [10.6 kB] Get:3720 http://deb.debian.org/debian bookworm/main amd64 r-cran-xml2 amd64 1.3.3-1+b1 [280 kB] Get:3721 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biomart all 2.54.0+dfsg-1 [442 kB] Get:3722 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biomformat all 1.26.0+dfsg-1 [217 kB] Get:3723 http://deb.debian.org/debian bookworm/main amd64 r-cran-dichromat all 1:2.0-0.1-1 [149 kB] Get:3724 http://deb.debian.org/debian bookworm/main amd64 r-bioc-genomicfeatures all 1.50.4+dfsg-1 [1676 kB] Get:3725 http://deb.debian.org/debian bookworm/main amd64 r-bioc-bsgenome all 1.66.3-1 [6997 kB] Get:3726 http://deb.debian.org/debian bookworm/main amd64 r-bioc-variantannotation amd64 1.44.1-1 [3642 kB] Get:3727 http://deb.debian.org/debian bookworm/main amd64 r-bioc-protgenerics all 1.30.0-1 [215 kB] Get:3728 http://deb.debian.org/debian bookworm/main amd64 r-bioc-ensembldb all 2.22.0+dfsg-1 [1484 kB] Get:3729 http://deb.debian.org/debian bookworm/main amd64 r-bioc-biovizbase amd64 1.46.0-1 [2662 kB] Get:3730 http://deb.debian.org/debian bookworm/main amd64 r-cran-pracma all 2.4.2-1 [1699 kB] Get:3731 http://deb.debian.org/debian bookworm/main amd64 r-cran-powerlaw all 0.70.6-2 [3367 kB] Get:3732 http://deb.debian.org/debian bookworm/main amd64 r-bioc-go.db all 3.16.0-1 [12.4 MB] Get:3733 http://deb.debian.org/debian bookworm/main amd64 r-bioc-cner amd64 1.34.0+dfsg-1 [8400 kB] Get:3734 http://deb.debian.org/debian bookworm/main amd64 r-cran-fastcluster amd64 1.2.3-2 [188 kB] Get:3735 http://deb.debian.org/debian bookworm/main amd64 r-bioc-gviz all 1.42.1+dfsg-1 [5145 kB] Get:3736 http://deb.debian.org/debian bookworm/main amd64 r-bioc-cummerbund all 2.40.0-1 [2557 kB] Get:3737 http://deb.debian.org/debian bookworm/main amd64 r-bioc-sparsematrixstats amd64 1.10.0+dfsg-1 [859 kB] Get:3738 http://deb.debian.org/debian bookworm/main amd64 r-bioc-delayedmatrixstats all 1.20.0+ds-1 [430 kB] Get:3739 http://deb.debian.org/debian bookworm/main amd64 r-bioc-dirichletmultinomial amd64 1.40.0-1 [600 kB] Get:3740 http://deb.debian.org/debian bookworm/main amd64 r-cran-blockmodeling amd64 1.1.4-1 [428 kB] Get:3741 http://deb.debian.org/debian bookworm/main amd64 r-bioc-ebseq all 1.38.0-1 [1338 kB] Get:3742 http://deb.debian.org/debian bookworm/main amd64 r-bioc-limma amd64 3.54.1+dfsg-1 [1768 kB] Get:3743 http://deb.debian.org/debian bookworm/main amd64 r-bioc-edger amd64 3.40.2+dfsg-1 [1093 kB] Get:3744 http://deb.debian.org/debian bookworm/main amd64 r-bioc-genefilter amd64 1.80.3-1 [1042 kB] Get:3745 http://deb.debian.org/debian bookworm/main amd64 r-bioc-geoquery all 2.66.0+dfsg-1 [13.6 MB] Get:3746 http://deb.debian.org/debian bookworm/main amd64 r-bioc-hilbertvis amd64 1.56.0-1 [883 kB] Get:3747 http://deb.debian.org/debian bookworm/main amd64 r-bioc-htsfilter all 1.38.0+dfsg-2 [162 kB] Get:3748 http://deb.debian.org/debian bookworm/main amd64 r-bioc-impute amd64 1.72.3-1 [664 kB] Get:3749 http://deb.debian.org/debian bookworm/main amd64 r-cran-credentials all 1.3.2-1 [168 kB] Get:3750 http://deb.debian.org/debian bookworm/main amd64 r-cran-gert amd64 1.9.2+dfsg-1 [237 kB] Get:3751 http://deb.debian.org/debian bookworm/main amd64 r-cran-gitcreds all 0.1.2-1 [92.7 kB] Get:3752 http://deb.debian.org/debian bookworm/main amd64 r-cran-httr2 all 0.2.2-2 [394 kB] Get:3753 http://deb.debian.org/debian bookworm/main amd64 r-cran-ini all 0.3.1-2 [15.6 kB] Get:3754 http://deb.debian.org/debian bookworm/main amd64 r-cran-gh all 1.4.0-1 [107 kB] Get:3755 http://deb.debian.org/debian bookworm/main amd64 r-cran-whisker all 0.4.1-1 [62.3 kB] Get:3756 http://deb.debian.org/debian bookworm/main amd64 r-cran-usethis all 2.1.6-1 [805 kB] Get:3757 http://deb.debian.org/debian bookworm/main amd64 r-cran-cmdfun all 1.0.2-2 [92.1 kB] Get:3758 http://deb.debian.org/debian bookworm/main amd64 r-bioc-megadepth all 1.8.0+ds-1 [88.4 kB] Get:3759 http://deb.debian.org/debian bookworm/main amd64 r-bioc-mergeomics all 1.26.0-1 [2689 kB] Get:3760 http://deb.debian.org/debian bookworm/main amd64 r-cran-shape all 1.4.6-1 [770 kB] Get:3761 http://deb.debian.org/debian bookworm/main amd64 r-cran-glmnet amd64 4.1-6-1 [1924 kB] Get:3762 http://deb.debian.org/debian bookworm/main amd64 r-bioc-wrench all 1.16.0+dfsg-1 [58.6 kB] Get:3763 http://deb.debian.org/debian bookworm/main amd64 r-bioc-metagenomeseq all 1.40.0-1 [2108 kB] Get:3764 http://deb.debian.org/debian bookworm/main amd64 r-bioc-rhdf5lib amd64 1.20.0+dfsg-1 [102 kB] Get:3765 http://deb.debian.org/debian bookworm/main amd64 r-bioc-rhdf5filters amd64 1.10.0+dfsg-1 [120 kB] Get:3766 http://deb.debian.org/debian bookworm/main amd64 r-bioc-rhdf5 amd64 2.42.0+dfsg-1 [792 kB] Get:3767 http://deb.debian.org/debian bookworm/main amd64 r-cran-beeswarm amd64 0.4.0-1+b1 [82.4 kB] Get:3768 http://deb.debian.org/debian bookworm/main amd64 r-cran-vipor all 0.4.5-3 [4345 kB] Get:3769 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggbeeswarm all 0.7.1-1 [1737 kB] Get:3770 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggally all 2.1.2-1 [1670 kB] Get:3771 http://deb.debian.org/debian bookworm/main amd64 r-bioc-multiassayexperiment all 1.24.0+dfsg-2 [1077 kB] Get:3772 http://deb.debian.org/debian bookworm/main amd64 r-cran-doparallel all 1.0.17-1 [188 kB] Get:3773 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [108 kB] Get:3774 http://deb.debian.org/debian bookworm/main amd64 r-cran-here all 1.0.1-2 [48.7 kB] Get:3775 http://deb.debian.org/debian bookworm/main amd64 r-cran-reticulate amd64 1.28+dfsg-1 [1341 kB] Get:3776 http://deb.debian.org/debian bookworm/main amd64 r-bioc-mofa all 1.6.1+dfsg-10 [562 kB] Get:3777 http://deb.debian.org/debian bookworm/main amd64 r-cran-registry all 0.5-1-2 [202 kB] Get:3778 http://deb.debian.org/debian bookworm/main amd64 r-cran-rngtools all 1.5.2-1 [83.4 kB] Get:3779 http://deb.debian.org/debian bookworm/main amd64 r-cran-nmf amd64 0.25-1 [2985 kB] Get:3780 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggdendro all 0.1.23+dfsg-1 [143 kB] Get:3781 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggalluvial all 0.12.5-2 [1889 kB] Get:3782 http://deb.debian.org/debian bookworm/main amd64 r-bioc-mutationalpatterns all 3.8.1+dfsg-1 [2479 kB] Get:3783 http://deb.debian.org/debian bookworm/main amd64 r-bioc-pcamethods amd64 1.90.0-1 [945 kB] Get:3784 http://deb.debian.org/debian bookworm/main amd64 r-cran-pixmap all 0.4-12-1 [201 kB] Get:3785 http://deb.debian.org/debian bookworm/main amd64 r-cran-ade4 amd64 1.7-22-1 [5349 kB] Get:3786 http://deb.debian.org/debian bookworm/main amd64 r-cran-ape amd64 5.7-1 [2884 kB] Get:3787 http://deb.debian.org/debian bookworm/main amd64 r-cran-igraph amd64 1.3.5-3 [3508 kB] Get:3788 http://deb.debian.org/debian bookworm/main amd64 r-cran-permute all 0.9-7-1 [225 kB] Get:3789 http://deb.debian.org/debian bookworm/main amd64 r-cran-vegan amd64 2.6-4+dfsg-1 [3089 kB] Get:3790 http://deb.debian.org/debian bookworm/main amd64 r-bioc-phyloseq all 1.42.0+dfsg-1 [2260 kB] Get:3791 http://deb.debian.org/debian bookworm/main amd64 r-bioc-preprocesscore amd64 1.60.2+ds-1 [149 kB] Get:3792 http://deb.debian.org/debian bookworm/main amd64 r-bioc-qvalue all 2.30.0-1 [2797 kB] Get:3793 http://deb.debian.org/debian bookworm/main amd64 r-bioc-singlecellexperiment all 1.20.0+ds-1 [826 kB] Get:3794 http://deb.debian.org/debian bookworm/main amd64 r-bioc-scuttle amd64 1.8.4+dfsg-1 [420 kB] Get:3795 http://deb.debian.org/debian bookworm/main amd64 r-cran-rtsne amd64 0.16-1 [101 kB] Get:3796 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcppml amd64 0.3.7-2 [173 kB] Get:3797 http://deb.debian.org/debian bookworm/main amd64 r-cran-fnn amd64 1.1.3.1-1 [120 kB] Get:3798 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcppannoy amd64 0.0.20-1 [228 kB] Get:3799 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcppprogress all 0.4.2-2 [21.8 kB] Get:3800 http://deb.debian.org/debian bookworm/main amd64 r-cran-sitmo amd64 2.0.2-1+b1 [130 kB] Get:3801 http://deb.debian.org/debian bookworm/main amd64 r-cran-dqrng amd64 0.3.0+dfsg-1+b1 [122 kB] Get:3802 http://deb.debian.org/debian bookworm/main amd64 r-cran-uwot amd64 0.1.14-2 [599 kB] Get:3803 http://deb.debian.org/debian bookworm/main amd64 r-cran-cairo amd64 1.6-0-1 [77.1 kB] Get:3804 http://deb.debian.org/debian bookworm/main amd64 r-cran-systemfonts amd64 1.0.4-1 [227 kB] Get:3805 http://deb.debian.org/debian bookworm/main amd64 r-cran-textshaping amd64 0.3.6-1+b1 [94.0 kB] Get:3806 http://deb.debian.org/debian bookworm/main amd64 r-cran-ragg amd64 1.2.5-1 [398 kB] Get:3807 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggrastr all 1.0.1-2 [2500 kB] Get:3808 http://deb.debian.org/debian bookworm/main amd64 r-bioc-scater all 1.26.1+ds-1 [521 kB] Get:3809 http://deb.debian.org/debian bookworm/main amd64 r-bioc-seqlogo all 1.64.0+dfsg-1 [155 kB] Get:3810 http://deb.debian.org/debian bookworm/main amd64 r-cran-tfmpvalue amd64 0.0.9-1 [53.4 kB] Get:3811 http://deb.debian.org/debian bookworm/main amd64 r-bioc-tfbstools amd64 1.36.0+dfsg-2 [1012 kB] Get:3812 http://deb.debian.org/debian bookworm/main amd64 r-cran-expint amd64 0.1-8-1 [209 kB] Get:3813 http://deb.debian.org/debian bookworm/main amd64 r-cran-actuar amd64 3.3-2-1 [1401 kB] Get:3814 http://deb.debian.org/debian bookworm/main amd64 r-cran-segmented all 1.6-2-1 [759 kB] Get:3815 http://deb.debian.org/debian bookworm/main amd64 r-cran-seqinr amd64 4.2-23-1 [3992 kB] Get:3816 http://deb.debian.org/debian bookworm/main amd64 r-cran-adegenet amd64 2.1.10-1 [2719 kB] Get:3817 http://deb.debian.org/debian bookworm/main amd64 r-cran-adegraphics all 1.0-17-1 [3386 kB] Get:3818 http://deb.debian.org/debian bookworm/main amd64 r-cran-rncl amd64 0.8.7-1 [481 kB] Get:3819 http://deb.debian.org/debian bookworm/main amd64 r-cran-uuid amd64 1.1-0-1 [43.1 kB] Get:3820 http://deb.debian.org/debian bookworm/main amd64 r-cran-rnexml all 2.4.11+ds-1 [742 kB] Get:3821 http://deb.debian.org/debian bookworm/main amd64 r-cran-phylobase amd64 0.8.10-1+b1 [851 kB] Get:3822 http://deb.debian.org/debian bookworm/main amd64 r-cran-adephylo amd64 1.1-13-1 [609 kB] Get:3823 http://deb.debian.org/debian bookworm/main amd64 r-cran-admisc amd64 0.30-1 [332 kB] Get:3824 http://deb.debian.org/debian bookworm/main amd64 r-cran-aer all 1.2-10-1 [2590 kB] Get:3825 http://deb.debian.org/debian bookworm/main amd64 r-cran-airr all 1.4.1+dfsg-1 [321 kB] Get:3826 http://deb.debian.org/debian bookworm/main amd64 r-cran-alakazam amd64 1.2.1-1 [2409 kB] Get:3827 http://deb.debian.org/debian bookworm/main amd64 r-cran-apcluster amd64 1.4.10-1 [1425 kB] Get:3828 http://deb.debian.org/debian bookworm/main amd64 r-cran-argparser all 0.7.1-1 [56.3 kB] Get:3829 http://deb.debian.org/debian bookworm/main amd64 r-cran-arsenal all 3.6.3-1 [900 kB] Get:3830 http://deb.debian.org/debian bookworm/main amd64 r-cran-av amd64 0.8.3+dfsg-1 [79.6 kB] Get:3831 http://deb.debian.org/debian bookworm/main amd64 r-cran-bdsmatrix amd64 1.3-6-1 [294 kB] Get:3832 http://deb.debian.org/debian bookworm/main amd64 r-cran-bbmle all 1.0.25-2 [858 kB] Get:3833 http://deb.debian.org/debian bookworm/main amd64 r-cran-profmem all 0.6.0+dfsg-1 [46.5 kB] Get:3834 http://deb.debian.org/debian bookworm/main amd64 r-cran-bench amd64 1.1.2-1+b1 [345 kB] Get:3835 http://deb.debian.org/debian bookworm/main amd64 r-cran-bio3d amd64 2.4-4-1 [2949 kB] Get:3836 http://deb.debian.org/debian bookworm/main amd64 r-cran-triebeard amd64 0.3.0-4 [126 kB] Get:3837 http://deb.debian.org/debian bookworm/main amd64 r-cran-urltools amd64 1.7.3+dfsg-2 [256 kB] Get:3838 http://deb.debian.org/debian bookworm/main amd64 r-cran-httpcode all 0.3.0-2 [34.3 kB] Get:3839 http://deb.debian.org/debian bookworm/main amd64 r-cran-crul all 1.3+dfsg-1 [851 kB] Get:3840 http://deb.debian.org/debian bookworm/main amd64 r-cran-bold all 1.2.0-2 [892 kB] Get:3841 http://deb.debian.org/debian bookworm/main amd64 r-cran-boolnet amd64 2.1.7-1 [1639 kB] Get:3842 http://deb.debian.org/debian bookworm/main amd64 r-cran-brew all 1.0-8-1 [54.3 kB] Get:3843 http://deb.debian.org/debian bookworm/main amd64 r-cran-calibrate all 1.7.7-1 [352 kB] Get:3844 http://deb.debian.org/debian bookworm/main amd64 r-cran-cba amd64 0.2-23-1 [253 kB] Get:3845 http://deb.debian.org/debian bookworm/main amd64 r-cran-classint amd64 0.4-9+dfsg-1 [108 kB] Get:3846 http://deb.debian.org/debian bookworm/main amd64 r-cran-prettycode all 1.1.0-2 [247 kB] Get:3847 http://deb.debian.org/debian bookworm/main amd64 r-cran-selectr all 0.4-2-2 [412 kB] Get:3848 http://deb.debian.org/debian bookworm/main amd64 r-cran-cliapp all 0.1.1-1 [241 kB] Get:3849 http://deb.debian.org/debian bookworm/main amd64 r-cran-clubsandwich all 0.5.8-1 [626 kB] Get:3850 http://deb.debian.org/debian bookworm/main amd64 r-cran-clustergeneration all 1.3.7-1 [267 kB] Get:3851 http://deb.debian.org/debian bookworm/main amd64 r-cran-coda all 0.19-4-1 [328 kB] Get:3852 http://deb.debian.org/debian bookworm/main amd64 r-cran-collapse amd64 1.9.2-1 [2688 kB] Get:3853 http://deb.debian.org/debian bookworm/main amd64 r-cran-combinat all 0.0-8-7 [42.8 kB] Get:3854 http://deb.debian.org/debian bookworm/main amd64 r-cran-conditionz all 0.1.0-2 [58.2 kB] Get:3855 http://deb.debian.org/debian bookworm/main amd64 r-cran-rex all 1.2.1-1 [124 kB] Get:3856 http://deb.debian.org/debian bookworm/main amd64 r-cran-covr amd64 3.6.1+dfsg-1 [306 kB] Get:3857 http://deb.debian.org/debian bookworm/main amd64 r-cran-cubelyr all 1.0.2-1 [346 kB] Get:3858 http://deb.debian.org/debian bookworm/main amd64 r-cran-kernlab amd64 0.9-32-1 [2112 kB] Get:3859 http://deb.debian.org/debian bookworm/main amd64 r-cran-cvst all 0.2-3-1 [86.4 kB] Get:3860 http://deb.debian.org/debian bookworm/main amd64 r-cran-palmerpenguins all 0.1.1-1 [2975 kB] Get:3861 http://deb.debian.org/debian bookworm/main amd64 r-cran-dbitest all 1.7.3-1 [1090 kB] Get:3862 http://deb.debian.org/debian bookworm/main amd64 r-cran-deoptimr all 1.0-11-1 [42.4 kB] Get:3863 http://deb.debian.org/debian bookworm/main amd64 r-cran-robustbase amd64 0.95-0-1 [3021 kB] Get:3864 http://deb.debian.org/debian bookworm/main amd64 r-cran-sfsmisc all 1.1-14-1 [649 kB] Get:3865 http://deb.debian.org/debian bookworm/main amd64 r-cran-magic all 1.6-1-1 [400 kB] Get:3866 http://deb.debian.org/debian bookworm/main amd64 r-cran-lpsolve amd64 5.6.18-1 [322 kB] Get:3867 http://deb.debian.org/debian bookworm/main amd64 r-cran-linprog all 0.9-4-1 [75.0 kB] Get:3868 http://deb.debian.org/debian bookworm/main amd64 r-cran-geometry amd64 0.4.7-1 [822 kB] Get:3869 http://deb.debian.org/debian bookworm/main amd64 r-cran-ddalpha amd64 1.3.13-1 [1185 kB] Get:3870 http://deb.debian.org/debian bookworm/main amd64 r-cran-decor amd64 1.0.1-1+b1 [30.2 kB] Get:3871 http://deb.debian.org/debian bookworm/main amd64 r-cran-deoptim amd64 2.2-8-1 [120 kB] Get:3872 http://deb.debian.org/debian bookworm/main amd64 r-cran-pkgbuild all 1.4.0-1 [187 kB] Get:3873 http://deb.debian.org/debian bookworm/main amd64 r-cran-downlit all 0.4.2-1 [125 kB] Get:3874 http://deb.debian.org/debian bookworm/main amd64 r-cran-pkgdown all 2.0.7-1 [851 kB] Get:3875 http://deb.debian.org/debian bookworm/main amd64 r-cran-profvis amd64 0.3.7+dfsg-2 [82.3 kB] Get:3876 http://deb.debian.org/debian bookworm/main amd64 r-cran-sessioninfo all 1.2.2-1 [268 kB] Get:3877 http://deb.debian.org/debian bookworm/main amd64 r-cran-xopen all 1.0.0-2 [24.0 kB] Get:3878 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcmdcheck all 1.4.0-2 [206 kB] Get:3879 http://deb.debian.org/debian bookworm/main amd64 r-cran-remotes all 2.4.2-1 [417 kB] Get:3880 http://deb.debian.org/debian bookworm/main amd64 r-cran-roxygen2 amd64 7.2.3-1 [704 kB] Get:3881 http://deb.debian.org/debian bookworm/main amd64 r-cran-rversions all 2.1.2-1 [67.1 kB] Get:3882 http://deb.debian.org/debian bookworm/main amd64 r-cran-urlchecker all 1.0.1-2 [33.5 kB] Get:3883 http://deb.debian.org/debian bookworm/main amd64 r-cran-devtools all 2.4.5-1 [676 kB] Get:3884 http://deb.debian.org/debian bookworm/main amd64 r-cran-dfoptim all 2020.10-1-1 [74.9 kB] Get:3885 http://deb.debian.org/debian bookworm/main amd64 r-cran-drr all 0.0.4-2 [145 kB] Get:3886 http://deb.debian.org/debian bookworm/main amd64 r-cran-dimred amd64 0.2.6-1 [1561 kB] Get:3887 http://deb.debian.org/debian bookworm/main amd64 r-cran-diptest amd64 0.76-0-1+b1 [193 kB] Get:3888 http://deb.debian.org/debian bookworm/main amd64 r-cran-distory amd64 1.4.4-1+b1 [89.2 kB] Get:3889 http://deb.debian.org/debian bookworm/main amd64 r-cran-docopt all 0.7.1-2 [249 kB] Get:3890 http://deb.debian.org/debian bookworm/main amd64 r-cran-domc all 1.3.8-1 [168 kB] Get:3891 http://deb.debian.org/debian bookworm/main amd64 r-cran-dorng all 1.8.6-1 [309 kB] Get:3892 http://deb.debian.org/debian bookworm/main amd64 r-cran-dotcall64 amd64 1.0-2-1 [30.5 kB] Get:3893 http://deb.debian.org/debian bookworm/main amd64 r-cran-dygraphs all 1.1.1.6+dfsg-4 [317 kB] Get:3894 http://deb.debian.org/debian bookworm/main amd64 r-cran-dynamictreecut all 1.63-1-3 [93.5 kB] Get:3895 http://deb.debian.org/debian bookworm/main amd64 r-cran-dynlm all 0.3.6-2 [54.5 kB] Get:3896 http://deb.debian.org/debian bookworm/main amd64 r-cran-plotrix all 3.8-2-1 [1123 kB] Get:3897 http://deb.debian.org/debian bookworm/main amd64 r-cran-teachingdemos all 2.12-2 [1227 kB] Get:3898 http://deb.debian.org/debian bookworm/main amd64 r-cran-plotmo all 3.6.2-1 [1503 kB] Get:3899 http://deb.debian.org/debian bookworm/main amd64 r-cran-earth amd64 5.3.2-1 [1898 kB] Get:3900 http://deb.debian.org/debian bookworm/main amd64 r-cran-ellipse all 0.4.3-1 [75.4 kB] Get:3901 http://deb.debian.org/debian bookworm/main amd64 r-cran-emdbook all 1.3.12+ds-2 [203 kB] Get:3902 http://deb.debian.org/debian bookworm/main amd64 r-cran-estimability all 1.4.1-1 [42.7 kB] Get:3903 http://deb.debian.org/debian bookworm/main amd64 r-cran-emmeans all 1.8.4-1+dfsg-1 [1557 kB] Get:3904 http://deb.debian.org/debian bookworm/main amd64 r-cran-gsl amd64 2.1-8-1 [486 kB] Get:3905 http://deb.debian.org/debian bookworm/main amd64 r-cran-energy amd64 1.7-11-1 [283 kB] Get:3906 http://deb.debian.org/debian bookworm/main amd64 r-cran-evd amd64 2.3-6.1-1 [1729 kB] Get:3907 http://deb.debian.org/debian bookworm/main amd64 r-cran-expm amd64 0.999-7-1 [218 kB] Get:3908 http://deb.debian.org/debian bookworm/main amd64 r-cran-fastica amd64 1.2-3-1+b1 [42.1 kB] Get:3909 http://deb.debian.org/debian bookworm/main amd64 r-cran-fastmatch amd64 1.1-3-1+b1 [34.2 kB] Get:3910 http://deb.debian.org/debian bookworm/main amd64 r-cran-fauxpas all 0.5.0+dfsg-2 [978 kB] Get:3911 http://deb.debian.org/debian bookworm/main amd64 r-cran-spam amd64 2.9-1-1 [2706 kB] Get:3912 http://deb.debian.org/debian bookworm/main amd64 r-cran-maps amd64 3.4.1-1 [2010 kB] Get:3913 http://deb.debian.org/debian bookworm/main amd64 r-cran-fields amd64 14.1-1 [4062 kB] Get:3914 http://deb.debian.org/debian bookworm/main amd64 r-cran-filehash amd64 2.4-5-1 [338 kB] Get:3915 http://deb.debian.org/debian bookworm/main amd64 r-cran-fitdistrplus all 1.1-8-1 [2784 kB] Get:3916 http://deb.debian.org/debian bookworm/main amd64 r-cran-fontbitstreamvera all 0.1.1+dfsg-4 [326 kB] Get:3917 http://deb.debian.org/debian bookworm/main amd64 r-cran-fontliberation all 0.1.0+dfsg-4 [2262 kB] Get:3918 http://deb.debian.org/debian bookworm/main amd64 r-cran-fontquiver all 0.2.1-3 [2130 kB] Get:3919 http://deb.debian.org/debian bookworm/main amd64 r-cran-formattable all 0.2.1+dfsg-1 [156 kB] Get:3920 http://deb.debian.org/debian bookworm/main amd64 r-cran-fts amd64 0.9.9.2-2 [180 kB] Get:3921 http://deb.debian.org/debian bookworm/main amd64 r-cran-furrr all 0.3.1-1 [1022 kB] Get:3922 http://deb.debian.org/debian bookworm/main amd64 r-cran-g.data all 2.4-4 [86.8 kB] Get:3923 http://deb.debian.org/debian bookworm/main amd64 r-cran-gbrd amd64 0.4-11-2 [43.8 kB] Get:3924 http://deb.debian.org/debian bookworm/main amd64 r-cran-geepack amd64 1.3.9-1 [547 kB] Get:3925 http://deb.debian.org/debian bookworm/main amd64 r-cran-genabel.data all 1.0.0-4 [2424 kB] Get:3926 http://deb.debian.org/debian bookworm/main amd64 r-cran-genabel amd64 1.8-0-6 [3296 kB] Get:3927 http://deb.debian.org/debian bookworm/main amd64 r-cran-genetics all 1.3.8.1.3-1 [375 kB] Get:3928 http://deb.debian.org/debian bookworm/main amd64 r-cran-genoplotr all 0.8.11+dfsg-2 [875 kB] Get:3929 http://deb.debian.org/debian bookworm/main amd64 r-cran-wk amd64 0.7.1-1 [1725 kB] Get:3930 http://deb.debian.org/debian bookworm/main amd64 r-cran-s2 amd64 1.1.2-1 [1921 kB] Get:3931 http://deb.debian.org/debian bookworm/main amd64 r-cran-units amd64 0.8-1+dfsg-1 [260 kB] Get:3932 http://deb.debian.org/debian bookworm/main amd64 r-cran-sf amd64 1.0-9+dfsg-1+b1 [2853 kB] Get:3933 http://deb.debian.org/debian bookworm/main amd64 r-cran-geoknife all 1.6.10+dfsg-1 [646 kB] Get:3934 http://deb.debian.org/debian bookworm/main amd64 r-cran-geosphere amd64 1.5-18-1 [1001 kB] Get:3935 http://deb.debian.org/debian bookworm/main amd64 r-cran-tweenr amd64 2.0.2-1 [409 kB] Get:3936 http://deb.debian.org/debian bookworm/main amd64 r-cran-gganimate all 1.0.8-1 [1209 kB] Get:3937 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggridges all 0.5.4-1 [2205 kB] Get:3938 http://deb.debian.org/debian bookworm/main amd64 r-cran-ggthemes all 4.2.4-1 [432 kB] Get:3939 http://deb.debian.org/debian bookworm/main amd64 r-cran-goftest amd64 1.2-3-1+b1 [59.6 kB] Get:3940 http://deb.debian.org/debian bookworm/main amd64 r-cran-googlevis all 0.7.0+dfsg-1 [430 kB] Get:3941 http://deb.debian.org/debian bookworm/main amd64 r-cran-gridgraphics all 0.5-1-1 [248 kB] Get:3942 http://deb.debian.org/debian bookworm/main amd64 r-cran-gsa all 1.03.2-1 [101 kB] Get:3943 http://deb.debian.org/debian bookworm/main amd64 r-cran-sftime all 0.2-0-5 [168 kB] Get:3944 http://deb.debian.org/debian bookworm/main amd64 r-cran-intervals amd64 0.15.2-1+b1 [642 kB] Get:3945 http://deb.debian.org/debian bookworm/main amd64 r-cran-spacetime all 1.2-8+dfsg-1 [2794 kB] Get:3946 http://deb.debian.org/debian bookworm/main amd64 r-cran-lwgeom amd64 0.2-11-1 [397 kB] Get:3947 http://deb.debian.org/debian bookworm/main amd64 r-cran-stars all 0.6-0-4 [3812 kB] Get:3948 http://deb.debian.org/debian bookworm/main amd64 r-cran-gstat amd64 2.1-0-1 [2340 kB] Get:3949 http://deb.debian.org/debian bookworm/main amd64 r-cran-guerry all 1.8.0-1 [1250 kB] Get:3950 http://deb.debian.org/debian bookworm/main amd64 r-cran-polspline amd64 1.1.22-1 [576 kB] Get:3951 http://deb.debian.org/debian bookworm/main amd64 r-cran-rms amd64 6.5-0-1 [2155 kB] Get:3952 http://deb.debian.org/debian bookworm/main amd64 r-cran-haplo.stats amd64 1.9.3-1 [833 kB] Get:3953 http://deb.debian.org/debian bookworm/main amd64 r-cran-hdf5r amd64 1.3.8+dfsg-1 [2037 kB] Get:3954 http://deb.debian.org/debian bookworm/main amd64 r-cran-hexbin amd64 1.28.2-1 [1442 kB] Get:3955 http://deb.debian.org/debian bookworm/main amd64 r-cran-hunspell amd64 3.0.2+dfsg-1 [2539 kB] Get:3956 http://deb.debian.org/debian bookworm/main amd64 r-cran-ica all 1.0-3-1 [86.7 kB] Get:3957 http://deb.debian.org/debian bookworm/main amd64 r-cran-v8 amd64 4.2.2+dfsg-1 [100 kB] Get:3958 http://deb.debian.org/debian bookworm/main amd64 r-cran-jsonld all 2.2+dfsg-1 [69.8 kB] Get:3959 http://deb.debian.org/debian bookworm/main amd64 r-cran-kaos all 0.1.2-2 [32.4 kB] Get:3960 http://deb.debian.org/debian bookworm/main amd64 r-cran-mclust amd64 6.0.0-1 [3945 kB] Get:3961 http://deb.debian.org/debian bookworm/main amd64 r-cran-multicool amd64 0.1-12-1 [97.2 kB] Get:3962 http://deb.debian.org/debian bookworm/main amd64 r-cran-rgl amd64 1.0.1-1 [2994 kB] Get:3963 http://deb.debian.org/debian bookworm/main amd64 r-cran-misc3d all 0.9-1-1 [240 kB] Get:3964 http://deb.debian.org/debian bookworm/main amd64 r-cran-plot3d all 1.4-2 [2784 kB] Get:3965 http://deb.debian.org/debian bookworm/main amd64 r-cran-ks amd64 1.14.0-1 [1918 kB] Get:3966 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcppparallel amd64 5.1.6+dfsg-1 [304 kB] Get:3967 http://deb.debian.org/debian bookworm/main amd64 r-cran-lamw amd64 2.1.1-2 [48.4 kB] Get:3968 http://deb.debian.org/debian bookworm/main amd64 r-cran-lavasearch2 amd64 1.5.6+dfsg-1 [1874 kB] Get:3969 http://deb.debian.org/debian bookworm/main amd64 r-cran-lbfgsb3c amd64 2020-3.2-2 [367 kB] Get:3970 http://deb.debian.org/debian bookworm/main amd64 r-cran-leiden all 0.4.3+dfsg-1 [71.5 kB] Get:3971 http://deb.debian.org/debian bookworm/main amd64 r-cran-lmertest all 3.1-3-2 [545 kB] Get:3972 http://deb.debian.org/debian bookworm/main amd64 r-cran-lobstr amd64 1.1.2-1 [146 kB] Get:3973 http://deb.debian.org/debian bookworm/main amd64 r-cran-logcondens all 2.1.7-1 [562 kB] Get:3974 http://deb.debian.org/debian bookworm/main amd64 r-cran-minpack.lm amd64 1.2-3-1 [80.9 kB] Get:3975 http://deb.debian.org/debian bookworm/main amd64 r-cran-luminescence amd64 0.9.21-1 [3565 kB] Get:3976 http://deb.debian.org/debian bookworm/main amd64 r-cran-magick amd64 2.7.3+dfsg-3 [460 kB] Get:3977 http://deb.debian.org/debian bookworm/main amd64 r-cran-mapdata amd64 2.3.1-1 [17.0 MB] Get:3978 http://deb.debian.org/debian bookworm/main amd64 r-cran-mapproj amd64 1.2.11-1 [52.9 kB] Get:3979 http://deb.debian.org/debian bookworm/main amd64 r-cran-markdown all 1.5+dfsg-1 [121 kB] Get:3980 http://deb.debian.org/debian bookworm/main amd64 r-cran-mathjaxr all 1.6-0-1 [604 kB] Get:3981 http://deb.debian.org/debian bookworm/main amd64 r-cran-misctools all 0.6-26-2 [97.7 kB] Get:3982 http://deb.debian.org/debian bookworm/main amd64 r-cran-maxlik all 1.5-2-1 [1557 kB] Get:3983 http://deb.debian.org/debian bookworm/main amd64 r-cran-mda amd64 0.5-3-1 [724 kB] Get:3984 http://deb.debian.org/debian bookworm/main amd64 r-cran-metadat all 1.2-0-2 [831 kB] Get:3985 http://deb.debian.org/debian bookworm/main amd64 r-cran-pbapply all 1.7-0-1 [102 kB] Get:3986 http://deb.debian.org/debian bookworm/main amd64 r-cran-metafor all 3.8-1-1 [4432 kB] Get:3987 http://deb.debian.org/debian bookworm/main amd64 r-cran-rmpi amd64 0.6-9.2-2 [268 kB] Get:3988 http://deb.debian.org/debian bookworm/main amd64 r-cran-metamix amd64 0.3-2+b1 [744 kB] Get:3989 http://deb.debian.org/debian bookworm/main amd64 r-cran-timereg amd64 2.0.5-1 [973 kB] Get:3990 http://deb.debian.org/debian bookworm/main amd64 r-cran-mets amd64 1.3.2+dfsg-1 [3599 kB] Get:3991 http://deb.debian.org/debian bookworm/main amd64 r-cran-mlbench amd64 2.1-3-1 [1049 kB] Get:3992 http://deb.debian.org/debian bookworm/main amd64 r-cran-mlmetrics all 1.1.1-3 [72.5 kB] Get:3993 http://deb.debian.org/debian bookworm/main amd64 r-cran-mlmrev all 1.0-8-2 [1807 kB] Get:3994 http://deb.debian.org/debian bookworm/main amd64 r-cran-mnormt amd64 2.1.1-2 [171 kB] Get:3995 http://deb.debian.org/debian bookworm/main amd64 r-cran-mockery all 0.4.3+dfsg-1 [40.7 kB] Get:3996 http://deb.debian.org/debian bookworm/main amd64 r-cran-mockr all 0.2.1-1 [43.9 kB] Get:3997 http://deb.debian.org/debian bookworm/main amd64 r-cran-modeldata all 1.1.0-1 [4253 kB] Get:3998 http://deb.debian.org/debian bookworm/main amd64 r-cran-natserv all 1.0.0+dfsg-1 [210 kB] Get:3999 http://deb.debian.org/debian bookworm/main amd64 r-cran-ncdf4 amd64 1.21-1 [276 kB] Get:4000 http://deb.debian.org/debian bookworm/main amd64 r-cran-rnetcdf amd64 2.6-2-1 [217 kB] Get:4001 http://deb.debian.org/debian bookworm/main amd64 r-cran-ncmeta all 0.3.5-1 [320 kB] Get:4002 http://deb.debian.org/debian bookworm/main amd64 r-cran-ncdfgeom all 1.1.4+dfsg-1 [3907 kB] Get:4003 http://deb.debian.org/debian bookworm/main amd64 r-cran-statnet.common amd64 4.8.0-1 [241 kB] Get:4004 http://deb.debian.org/debian bookworm/main amd64 r-cran-network amd64 1.18.1-1 [808 kB] Get:4005 http://deb.debian.org/debian bookworm/main amd64 r-cran-nleqslv amd64 3.3.4-1 [99.3 kB] Get:4006 http://deb.debian.org/debian bookworm/main amd64 r-cran-optimparallel all 1.0-2-2 [206 kB] Get:4007 http://deb.debian.org/debian bookworm/main amd64 r-cran-optimx all 2022-4.30+dfsg-1 [796 kB] Get:4008 http://deb.debian.org/debian bookworm/main amd64 r-cran-packrat all 0.9.0-2 [658 kB] Get:4009 http://deb.debian.org/debian bookworm/main amd64 r-cran-patchwork all 1.1.2-1 [3247 kB] Get:4010 http://deb.debian.org/debian bookworm/main amd64 r-cran-pcapp amd64 2.0-3-1 [362 kB] Get:4011 http://deb.debian.org/debian bookworm/main amd64 r-cran-pcict amd64 0.5-4.4-1 [94.6 kB] Get:4012 http://deb.debian.org/debian bookworm/main amd64 r-cran-qpdf amd64 1.3.0+dfsg-2 [98.8 kB] Get:4013 http://deb.debian.org/debian bookworm/main amd64 r-cran-pdftools amd64 3.3.3-1 [1012 kB] Get:4014 http://deb.debian.org/debian bookworm/main amd64 r-cran-phangorn amd64 2.11.1+dfsg-1 [1679 kB] Get:4015 http://deb.debian.org/debian bookworm/main amd64 r-cran-scatterplot3d all 0.3-42-1 [354 kB] Get:4016 http://deb.debian.org/debian bookworm/main amd64 r-cran-phytools all 1.5-1-1 [2294 kB] Get:4017 http://deb.debian.org/debian bookworm/main amd64 r-cran-rbibutils amd64 2.2.13-1 [678 kB] Get:4018 http://deb.debian.org/debian bookworm/main amd64 r-cran-rdpack all 2.4-1 [958 kB] Get:4019 http://deb.debian.org/debian bookworm/main amd64 r-cran-plm all 2.6-2+dfsg-1 [2067 kB] Get:4020 http://deb.debian.org/debian bookworm/main amd64 r-cran-pls all 2.8-1-1 [4754 kB] Get:4021 http://deb.debian.org/debian bookworm/main amd64 r-cran-webutils amd64 1.1-1+b1 [48.1 kB] Get:4022 http://deb.debian.org/debian bookworm/main amd64 r-cran-sodium amd64 1.2.1+dfsg-1 [61.3 kB] Get:4023 http://deb.debian.org/debian bookworm/main amd64 r-cran-swagger all 3.33.1-1 [334 kB] Get:4024 http://deb.debian.org/debian bookworm/main amd64 r-cran-plumber all 1.2.1+ds-1 [1092 kB] Get:4025 http://deb.debian.org/debian bookworm/main amd64 r-cran-polyclip amd64 1.10-4-1 [109 kB] Get:4026 http://deb.debian.org/debian bookworm/main amd64 r-cran-polycor all 0.8-1-1 [74.0 kB] Get:4027 http://deb.debian.org/debian bookworm/main amd64 r-cran-r.cache all 0.16.0-1 [114 kB] Get:4028 http://deb.debian.org/debian bookworm/main amd64 r-cran-pscbs all 0.66.0-2 [4367 kB] Get:4029 http://deb.debian.org/debian bookworm/main amd64 r-cran-pscl amd64 1.5.5-1+b1 [3538 kB] Get:4030 http://deb.debian.org/debian bookworm/main amd64 r-cran-pvclust all 2.2-0-2 [185 kB] Get:4031 http://deb.debian.org/debian bookworm/main amd64 r-cran-qqman all 0.1.8+dfsg-1 [128 kB] Get:4032 http://deb.debian.org/debian bookworm/main amd64 r-cran-qtl amd64 1.58-1 [5524 kB] Get:4033 http://deb.debian.org/debian bookworm/main amd64 r-cran-r.devices all 2.17.1+ds-1 [398 kB] Get:4034 http://deb.debian.org/debian bookworm/main amd64 tcl8.6 amd64 8.6.13+dfsg-2 [120 kB] Get:4035 http://deb.debian.org/debian bookworm/main amd64 tcl amd64 8.6.13 [4016 B] Get:4036 http://deb.debian.org/debian bookworm/main amd64 r-cran-r.rsp all 0.45.0+ds-1 [1551 kB] Get:4037 http://deb.debian.org/debian bookworm/main amd64 r-cran-randomfieldsutils amd64 1.2.5-1 [316 kB] Get:4038 http://deb.debian.org/debian bookworm/main amd64 r-cran-randomfields amd64 3.3.14-1 [3231 kB] Get:4039 http://deb.debian.org/debian bookworm/main amd64 r-cran-randomforest amd64 4.7-1.1-1 [214 kB] Get:4040 http://deb.debian.org/debian bookworm/main amd64 r-cran-rann amd64 2.6.1-1+b2 [41.9 kB] Get:4041 http://deb.debian.org/debian bookworm/main amd64 r-cran-terra amd64 1.7-3-1 [3313 kB] Get:4042 http://deb.debian.org/debian bookworm/main amd64 r-cran-raster amd64 3.6-14-1 [3050 kB] Get:4043 http://deb.debian.org/debian bookworm/main amd64 r-cran-ratelimitr all 0.4.1-2 [44.3 kB] Get:4044 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcarb all 0.1.6+dfsg-1 [114 kB] Get:4045 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcpproll amd64 0.3.0-2 [86.5 kB] Get:4046 http://deb.debian.org/debian bookworm/main amd64 r-cran-redland amd64 1.0.17-16-1 [705 kB] Get:4047 http://deb.debian.org/debian bookworm/main amd64 r-cran-rdflib all 0.2.5+dfsg-1 [150 kB] Get:4048 http://deb.debian.org/debian bookworm/main amd64 r-cran-rentrez all 1.2.3+dfsg-1 [119 kB] Get:4049 http://deb.debian.org/debian bookworm/main amd64 r-cran-rgdal amd64 1.6-4+dfsg-1 [3021 kB] Get:4050 http://deb.debian.org/debian bookworm/main amd64 r-cran-rgenoud amd64 5.9-0.3-1 [668 kB] Get:4051 http://deb.debian.org/debian bookworm/main amd64 r-cran-rhandsontable all 0.3.8+dfsg-1 [321 kB] Get:4052 http://deb.debian.org/debian bookworm/main amd64 r-cran-solrium all 1.2.0+dfsg-1 [395 kB] Get:4053 http://deb.debian.org/debian bookworm/main amd64 r-cran-ritis all 1.0.0-1 [195 kB] Get:4054 http://deb.debian.org/debian bookworm/main amd64 r-cran-shinydashboard all 0.7.2-1 [258 kB] Get:4055 http://deb.debian.org/debian bookworm/main amd64 r-cran-rlumshiny all 0.2.3-1 [281 kB] Get:4056 http://deb.debian.org/debian bookworm/main amd64 r-cran-rmysql amd64 0.10.25-1 [276 kB] Get:4057 http://deb.debian.org/debian bookworm/main amd64 r-cran-robumeta all 2.0-3 [521 kB] Get:4058 http://deb.debian.org/debian bookworm/main amd64 r-cran-rose all 0.0-4-2 [113 kB] Get:4059 http://deb.debian.org/debian bookworm/main amd64 r-cran-rotl all 3.0.14-1 [475 kB] Get:4060 http://deb.debian.org/debian bookworm/main amd64 r-cran-rpostgresql amd64 0.7-5+dfsg-1 [373 kB] Get:4061 http://deb.debian.org/debian bookworm/main amd64 r-cran-rredlist all 0.7.1-1 [571 kB] Get:4062 http://deb.debian.org/debian bookworm/main amd64 r-cran-warp amd64 0.2.0-2 [70.3 kB] Get:4063 http://deb.debian.org/debian bookworm/main amd64 r-cran-slider amd64 0.3.0-1 [317 kB] Get:4064 http://deb.debian.org/debian bookworm/main amd64 r-cran-rsample all 1.1.1+dfsg-1 [401 kB] Get:4065 http://deb.debian.org/debian bookworm/main amd64 r-cran-rsclient amd64 0.7-9-1 [68.5 kB] Get:4066 http://deb.debian.org/debian bookworm/main amd64 r-cran-rsconnect all 0.8.29-1 [723 kB] Get:4067 http://deb.debian.org/debian bookworm/main amd64 r-cran-rspectra amd64 0.16-1-1 [389 kB] Get:4068 http://deb.debian.org/debian bookworm/main amd64 r-cran-rsvg amd64 2.4.0-1 [265 kB] Get:4069 http://deb.debian.org/debian bookworm/main amd64 r-cran-runit all 0.4.32-3 [294 kB] Get:4070 http://deb.debian.org/debian bookworm/main amd64 r-cran-rwave amd64 2.6-5-1 [1005 kB] Get:4071 http://deb.debian.org/debian bookworm/main amd64 r-cran-shinyfiles all 0.9.3-1 [408 kB] Get:4072 http://deb.debian.org/debian bookworm/main amd64 r-cran-samr amd64 3.0-2 [3884 kB] Get:4073 http://deb.debian.org/debian bookworm/main amd64 r-cran-scatterd3 all 1.0.1+dfsg-1 [140 kB] Get:4074 http://deb.debian.org/debian bookworm/main amd64 r-cran-scattermore amd64 0.8-1 [45.0 kB] Get:4075 http://deb.debian.org/debian bookworm/main amd64 r-cran-sctransform amd64 0.3.5-1 [491 kB] Get:4076 http://deb.debian.org/debian bookworm/main amd64 r-cran-sdmtools amd64 1.1-221.2-1+b1 [229 kB] Get:4077 http://deb.debian.org/debian bookworm/main amd64 r-cran-setrng all 2022.4-1-1 [55.1 kB] Get:4078 http://deb.debian.org/debian bookworm/main amd64 r-cran-seuratobject amd64 4.1.3-1 [1057 kB] Get:4079 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat.utils amd64 3.0-1-1 [359 kB] Get:4080 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat.data all 3.0-0-1 [4075 kB] Get:4081 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat.geom amd64 3.0-6-1 [3777 kB] Get:4082 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat.random amd64 3.1-3-1 [1119 kB] Get:4083 http://deb.debian.org/debian bookworm/main amd64 r-cran-tensor all 1.5-4 [15.6 kB] Get:4084 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat.sparse amd64 3.0-0-1 [213 kB] Get:4085 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat.explore amd64 3.0-6-1 [3175 kB] Get:4086 http://deb.debian.org/debian bookworm/main amd64 r-cran-seurat amd64 4.3.0-1 [3062 kB] Get:4087 http://deb.debian.org/debian bookworm/main amd64 r-cran-shazam all 1.1.2-1 [2188 kB] Get:4088 http://deb.debian.org/debian bookworm/main amd64 r-cran-shinybs all 0.61.1-1 [103 kB] Get:4089 http://deb.debian.org/debian bookworm/main amd64 r-cran-sm amd64 2.2-5.7.1-1 [784 kB] Get:4090 http://deb.debian.org/debian bookworm/main amd64 r-cran-sna amd64 2.7-1-1 [1241 kB] Get:4091 http://deb.debian.org/debian bookworm/main amd64 r-cran-snowfall all 1.84-6.2-1 [247 kB] Get:4092 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat.model amd64 3.2-1-1 [3312 kB] Get:4093 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat.linnet amd64 3.0-6-1 [1387 kB] Get:4094 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat amd64 3.0-3-1 [3316 kB] Get:4095 http://deb.debian.org/debian bookworm/main amd64 r-cran-spatstat.core amd64 2.4-4-2 [5986 kB] Get:4096 http://deb.debian.org/debian bookworm/main amd64 r-cran-spdata all 2.2.1-1 [3611 kB] Get:4097 http://deb.debian.org/debian bookworm/main amd64 r-cran-spdep amd64 1.2-7+dfsg-1 [2108 kB] Get:4098 http://deb.debian.org/debian bookworm/main amd64 r-cran-spelling all 2.2-2 [54.4 kB] Get:4099 http://deb.debian.org/debian bookworm/main amd64 r-cran-spp amd64 1.16.0-2 [323 kB] Get:4100 http://deb.debian.org/debian bookworm/main amd64 r-cran-stringdist amd64 0.9.10-1 [578 kB] Get:4101 http://deb.debian.org/debian bookworm/main amd64 r-cran-strucchange amd64 1.5-3-1 [930 kB] Get:4102 http://deb.debian.org/debian bookworm/main amd64 r-cran-svglite amd64 2.1.1-1 [193 kB] Get:4103 http://deb.debian.org/debian bookworm/main amd64 r-cran-systemfit all 1.1-28-1 [1171 kB] Get:4104 http://deb.debian.org/debian bookworm/main amd64 r-cran-worrms all 0.4.2+dfsg-1 [140 kB] Get:4105 http://deb.debian.org/debian bookworm/main amd64 r-cran-wikipedir all 1.5.0-3 [81.2 kB] Get:4106 http://deb.debian.org/debian bookworm/main amd64 r-cran-wikidataqueryservicer all 1.0.0-2 [26.9 kB] Get:4107 http://deb.debian.org/debian bookworm/main amd64 r-cran-wikidatar all 2.3.3-1 [1141 kB] Get:4108 http://deb.debian.org/debian bookworm/main amd64 r-cran-wikitaxa all 0.4.0+dfsg-1 [592 kB] Get:4109 http://deb.debian.org/debian bookworm/main amd64 r-cran-taxize all 0.9.100-1 [2593 kB] Get:4110 http://deb.debian.org/debian bookworm/main amd64 r-cran-tcr amd64 2.3.2+ds-1 [1959 kB] Get:4111 http://deb.debian.org/debian bookworm/main amd64 r-cran-testit all 0.13-1 [34.8 kB] Get:4112 http://deb.debian.org/debian bookworm/main amd64 r-cran-thematic all 0.1.2.1-3 [2365 kB] Get:4113 http://deb.debian.org/debian bookworm/main amd64 r-cran-themis all 1.0.0-1 [277 kB] Get:4114 http://deb.debian.org/debian bookworm/main amd64 r-cran-tigger all 1.0.1-1 [4097 kB] Get:4115 http://deb.debian.org/debian bookworm/main amd64 r-cran-tikzdevice amd64 0.12.4-1 [1070 kB] Get:4116 http://deb.debian.org/debian bookworm/main amd64 r-cran-timeseries all 4021.105-2 [1927 kB] Get:4117 http://deb.debian.org/debian bookworm/main amd64 r-cran-tinytest all 1.4.1-1 [677 kB] Get:4118 http://deb.debian.org/debian bookworm/main amd64 r-cran-transformr amd64 0.1.4-1 [169 kB] Get:4119 http://deb.debian.org/debian bookworm/main amd64 r-cran-treescape amd64 1.10.18+dfsg-2 [1118 kB] Get:4120 http://deb.debian.org/debian bookworm/main amd64 r-cran-truncdist all 1.0-2-4 [34.4 kB] Get:4121 http://deb.debian.org/debian bookworm/main amd64 r-cran-tsne all 0.1-3.1-1 [23.1 kB] Get:4122 http://deb.debian.org/debian bookworm/main amd64 r-cran-tufte all 0.12-1 [199 kB] Get:4123 http://deb.debian.org/debian bookworm/main amd64 r-cran-ucminf amd64 1.1-4.1-1 [166 kB] Get:4124 http://deb.debian.org/debian bookworm/main amd64 r-cran-webmockr all 0.8.2-1 [623 kB] Get:4125 http://deb.debian.org/debian bookworm/main amd64 r-cran-vcr all 1.2.0+dfsg-1 [968 kB] Get:4126 http://deb.debian.org/debian bookworm/main amd64 r-cran-vdiffr amd64 1.0.5-1 [141 kB] Get:4127 http://deb.debian.org/debian bookworm/main amd64 r-cran-waveslim amd64 1.8.4-1 [770 kB] Get:4128 http://deb.debian.org/debian bookworm/main amd64 r-cran-wavethresh amd64 4.7.2-1 [1654 kB] Get:4129 http://deb.debian.org/debian bookworm/main amd64 r-cran-webfakes amd64 1.1.7-1 [589 kB] Get:4130 http://deb.debian.org/debian bookworm/main amd64 r-cran-webgestaltr amd64 0.4.5-1 [470 kB] Get:4131 http://deb.debian.org/debian bookworm/main amd64 r-cran-webshot all 0.5.4-1 [189 kB] Get:4132 http://deb.debian.org/debian bookworm/main amd64 r-cran-wgcna amd64 1.72-1-1 [2928 kB] Get:4133 http://deb.debian.org/debian bookworm/main amd64 r-cran-wkutils amd64 0.1.3-1 [423 kB] Get:4134 http://deb.debian.org/debian bookworm/main amd64 r-cran-xslt amd64 1.4.4-1 [47.0 kB] Get:4135 http://deb.debian.org/debian bookworm/main amd64 r-doc-html all 4.2.2.20221110-2 [555 kB] Get:4136 http://deb.debian.org/debian bookworm/main amd64 r-other-ascat all 3.1.1-1 [329 kB] Get:4137 http://deb.debian.org/debian bookworm/main amd64 r-other-mott-happy.hbrem amd64 2.4-5 [216 kB] Get:4138 http://deb.debian.org/debian bookworm/main amd64 r-other-rajewsky-dropbead all 0.3.1+git20180221.d746c6f+ds-3 [252 kB] Get:4139 http://deb.debian.org/debian bookworm/main amd64 ragout amd64 2.3-4 [2129 kB] Get:4140 http://deb.debian.org/debian bookworm/main amd64 rambo-k all 1.21+dfsg-4 [1169 kB] Get:4141 http://deb.debian.org/debian bookworm/main amd64 rampler amd64 2.1.1-1 [21.2 kB] Get:4142 http://deb.debian.org/debian bookworm/main amd64 rapmap amd64 0.15.0+dfsg-3+b2 [849 kB] Get:4143 http://deb.debian.org/debian bookworm/main amd64 rasmol amd64 2.7.6.0-3 [839 kB] Get:4144 http://deb.debian.org/debian bookworm/main amd64 raster3d amd64 3.0-7-2+b1 [1288 kB] Get:4145 http://deb.debian.org/debian bookworm/main amd64 rate4site amd64 3.0.0-8 [626 kB] Get:4146 http://deb.debian.org/debian bookworm/main amd64 ray amd64 2.3.1-7 [849 kB] Get:4147 http://deb.debian.org/debian bookworm/main amd64 rdp-readseq all 2.0.2-9 [456 kB] Get:4148 http://deb.debian.org/debian bookworm/main amd64 rdp-alignment all 1.2.0-8 [81.7 kB] Get:4149 http://deb.debian.org/debian bookworm/main amd64 rdp-classifier all 2.10.2-6 [228 kB] Get:4150 http://deb.debian.org/debian bookworm/main amd64 rdp-classifier-doc all 2.10.2-6 [380 kB] Get:4151 http://deb.debian.org/debian bookworm/main amd64 readseq amd64 1-14 [56.7 kB] Get:4152 http://deb.debian.org/debian bookworm/main amd64 readucks all 0.0.3-5 [20.5 kB] Get:4153 http://deb.debian.org/debian bookworm/main amd64 snpomatic amd64 1.0-6 [85.1 kB] Get:4154 http://deb.debian.org/debian bookworm/main amd64 reapr amd64 1.0.18+dfsg-5+b1 [209 kB] Get:4155 http://deb.debian.org/debian bookworm/main amd64 recan all 0.1.5+dfsg-2 [16.6 kB] Get:4156 http://deb.debian.org/debian bookworm/main amd64 relion amd64 3.1.3-3+b1 [15.1 MB] Get:4157 http://deb.debian.org/debian bookworm/main amd64 relion-gui amd64 3.1.3-3+b1 [1158 kB] Get:4158 http://deb.debian.org/debian bookworm/main amd64 repeatmasker-recon amd64 1.08-7+b1 [85.5 kB] Get:4159 http://deb.debian.org/debian bookworm/main amd64 reprof all 1.0.1-8 [15.9 kB] Get:4160 http://deb.debian.org/debian bookworm/main amd64 resfinder-db all 0.0+git20220524.fa32d9a-1 [9079 kB] Get:4161 http://deb.debian.org/debian bookworm/main amd64 resfinder all 4.3.0-1 [66.7 kB] Get:4162 http://deb.debian.org/debian bookworm/main amd64 rnahybrid amd64 2.1.2-7 [167 kB] Get:4163 http://deb.debian.org/debian bookworm/main amd64 roary all 3.13.0+dfsg-1 [184 kB] Get:4164 http://deb.debian.org/debian bookworm/main amd64 rockhopper all 2.0.3+dfsg2-3 [597 kB] Get:4165 http://deb.debian.org/debian bookworm/main amd64 roguenarok amd64 1.0.1-3 [202 kB] Get:4166 http://deb.debian.org/debian bookworm/main amd64 rsem amd64 1.3.3+dfsg-2+b1 [36.1 MB] Get:4167 http://deb.debian.org/debian bookworm/main amd64 rtax all 0.984-8 [26.7 kB] Get:4168 http://deb.debian.org/debian bookworm/main amd64 ruby-bio all 2.0.4-1 [655 kB] Get:4169 http://deb.debian.org/debian bookworm/main amd64 ruby-facade all 1.2.1-1 [8996 B] Get:4170 http://deb.debian.org/debian bookworm/main amd64 ruby-pathname2 all 1.8.2-2 [17.9 kB] Get:4171 http://deb.debian.org/debian bookworm/main amd64 ruby-fixwhich all 1.0.2-2 [4284 B] Get:4172 http://deb.debian.org/debian bookworm/main amd64 ruby-threach all 0.2.0-2 [5320 B] Get:4173 http://deb.debian.org/debian bookworm/main amd64 ruby-trollop all 2.0-2.1 [17.0 kB] Get:4174 http://deb.debian.org/debian bookworm/main amd64 ruby-crb-blast all 0.6.9-4 [12.0 kB] Get:4175 http://deb.debian.org/debian bookworm/main amd64 runcircos-gui amd64 0.0+git20200528.82dda8c-1 [1313 kB] Get:4176 http://deb.debian.org/debian bookworm/main amd64 saint amd64 2.5.0+dfsg-4+b2 [94.4 kB] Get:4177 http://deb.debian.org/debian bookworm/main amd64 salmid all 0.1.23-5 [1338 kB] Get:4178 http://deb.debian.org/debian bookworm/main amd64 sambamba amd64 1.0+dfsg-1 [616 kB] Get:4179 http://deb.debian.org/debian bookworm/main amd64 samclip all 0.4.0-4 [20.1 kB] Get:4180 http://deb.debian.org/debian bookworm/main amd64 savvy-util amd64 2.1.0-2 [224 kB] Get:4181 http://deb.debian.org/debian bookworm/main amd64 sbmltoolbox all 4.1.0-5 [208 kB] Get:4182 http://deb.debian.org/debian bookworm/main amd64 scoary all 1.6.16-5 [235 kB] Get:4183 http://deb.debian.org/debian bookworm/main amd64 scrappie amd64 1.4.2-8+b3 [73.8 MB] Get:4184 http://deb.debian.org/debian bookworm/main amd64 scrm amd64 1.7.4-1 [64.8 kB] Get:4185 http://deb.debian.org/debian bookworm/main amd64 scythe amd64 0.994+git20141017.20d3cff-3 [18.5 kB] Get:4186 http://deb.debian.org/debian bookworm/main amd64 seaview amd64 1:5.0.5-2 [392 kB] Get:4187 http://deb.debian.org/debian bookworm/main amd64 seer amd64 1.1.4-7 [1176 kB] Get:4188 http://deb.debian.org/debian bookworm/main amd64 segemehl amd64 0.3.4-5 [294 kB] Get:4189 http://deb.debian.org/debian bookworm/main amd64 seqan-needle amd64 1.0.1.0.0.git.3011926+ds-4 [277 kB] Get:4190 http://deb.debian.org/debian bookworm/main amd64 seqan-raptor amd64 2.0.0.0.git.fecfbca+ds-3 [603 kB] Get:4191 http://deb.debian.org/debian bookworm/main amd64 seqkit amd64 2.3.1+ds-1+b4 [6521 kB] Get:4192 http://deb.debian.org/debian bookworm/main amd64 seqprep amd64 1.3.2-8 [28.0 kB] Get:4193 http://deb.debian.org/debian bookworm/main amd64 sra-toolkit amd64 3.0.3+dfsg-6~deb12u1 [6756 kB] Get:4194 http://deb.debian.org/debian bookworm/main amd64 seqsero amd64 1.0.1+dfsg-6 [358 kB] Get:4195 http://deb.debian.org/debian bookworm/main amd64 sga amd64 0.10.15-7+b1 [832 kB] Get:4196 http://deb.debian.org/debian bookworm/main amd64 shasta amd64 0.11.1-1+b1 [623 kB] Get:4197 http://deb.debian.org/debian bookworm/main amd64 velvet amd64 1.2.10+dfsg1-8 [674 kB] Get:4198 http://deb.debian.org/debian bookworm/main amd64 skesa amd64 2.4.0-6+b1 [506 kB] Get:4199 http://deb.debian.org/debian bookworm/main amd64 trimmomatic all 0.39+dfsg-2 [758 kB] Get:4200 http://deb.debian.org/debian bookworm/main amd64 shovill amd64 1.1.0-9 [13.5 kB] Get:4201 http://deb.debian.org/debian bookworm/main amd64 sibelia amd64 3.0.7+dfsg-3 [317 kB] Get:4202 http://deb.debian.org/debian bookworm/main amd64 sibsim4 amd64 0.20-5 [30.4 kB] Get:4203 http://deb.debian.org/debian bookworm/main amd64 sickle amd64 1.33+git20150314.f3d6ae3-2 [18.4 kB] Get:4204 http://deb.debian.org/debian bookworm/main amd64 sigma-align amd64 1.1.3-8 [24.4 kB] Get:4205 http://deb.debian.org/debian bookworm/main amd64 sim4 amd64 0.0.20121010-8 [359 kB] Get:4206 http://deb.debian.org/debian bookworm/main amd64 simka amd64 1.5.3-7 [432 kB] Get:4207 http://deb.debian.org/debian bookworm/main amd64 simkamin all 1.5.3-7 [32.2 kB] Get:4208 http://deb.debian.org/debian bookworm/main amd64 ska amd64 1.0+dfsg-2 [134 kB] Get:4209 http://deb.debian.org/debian bookworm/main amd64 skewer amd64 0.2.2-6+b1 [88.5 kB] Get:4210 http://deb.debian.org/debian bookworm/main amd64 smithwaterman amd64 0.0+git20160702.2610e25-12+b1 [13.6 kB] Get:4211 http://deb.debian.org/debian bookworm/main amd64 smrtanalysis all 0~20210112 [3136 B] Get:4212 http://deb.debian.org/debian bookworm/main amd64 snap amd64 2013-11-29-11 [380 kB] Get:4213 http://deb.debian.org/debian bookworm/main amd64 snap-aligner amd64 2.0.2+dfsg-1 [827 kB] Get:4214 http://deb.debian.org/debian bookworm/main amd64 sniffles all 2.0.7-1 [43.4 kB] Get:4215 http://deb.debian.org/debian bookworm/main amd64 snp-sites amd64 2.5.1-2+b1 [14.5 kB] Get:4216 http://deb.debian.org/debian bookworm/main amd64 snpeff all 5.1+d+dfsg-3 [6940 B] Get:4217 http://deb.debian.org/debian bookworm/main amd64 snpsift all 5.1+dfsg2-2 [4400 B] Get:4218 http://deb.debian.org/debian bookworm/main amd64 soapaligner amd64 2.20-5 [51.2 kB] Get:4219 http://deb.debian.org/debian bookworm/main amd64 soapdenovo amd64 1.05-6 [938 kB] Get:4220 http://deb.debian.org/debian bookworm/main amd64 soapdenovo2 amd64 242+dfsg-3 [928 kB] Get:4221 http://deb.debian.org/debian bookworm/main amd64 soapsnp amd64 1.03-5 [49.8 kB] Get:4222 http://deb.debian.org/debian bookworm/main amd64 sortmerna amd64 4.3.6-2 [563 kB] Get:4223 http://deb.debian.org/debian bookworm/main amd64 spaced amd64 1.2.0-201605+dfsg-3 [57.4 kB] Get:4224 http://deb.debian.org/debian bookworm/main amd64 spaln-data all 2.4.13f+dfsg-1 [19.5 MB] Get:4225 http://deb.debian.org/debian bookworm/main amd64 spaln amd64 2.4.13f+dfsg-1 [347 kB] Get:4226 http://deb.debian.org/debian bookworm/main amd64 spoa amd64 4.0.8-1 [36.0 kB] Get:4227 http://deb.debian.org/debian bookworm/main amd64 time amd64 1.9-0.2 [50.8 kB] Get:4228 http://deb.debian.org/debian bookworm/main amd64 sprai amd64 0.9.9.23+dfsg1-2 [1511 kB] Get:4229 http://deb.debian.org/debian bookworm/main amd64 spread-phy all 1.0.7+dfsg-5 [3365 kB] Get:4230 http://deb.debian.org/debian bookworm/main amd64 squizz amd64 0.99d+dfsg-3 [31.9 kB] Get:4231 http://deb.debian.org/debian bookworm/main amd64 srst2 amd64 0.2.0-9 [61.2 kB] Get:4232 http://deb.debian.org/debian bookworm/main amd64 ssake all 4.0.1-1 [50.1 kB] Get:4233 http://deb.debian.org/debian bookworm/main amd64 ssl-cert all 1.1.2 [21.1 kB] Get:4234 http://deb.debian.org/debian bookworm/main amd64 sspace all 2.1.1+dfsg-7 [1237 kB] Get:4235 http://deb.debian.org/debian bookworm/main amd64 ssw-align amd64 1.1-13 [21.2 kB] Get:4236 http://deb.debian.org/debian bookworm/main amd64 stacks amd64 2.62+dfsg-1 [1124 kB] Get:4237 http://deb.debian.org/debian bookworm/main amd64 tk8.6 amd64 8.6.13-2 [69.4 kB] Get:4238 http://deb.debian.org/debian bookworm/main amd64 tk amd64 8.6.13 [4052 B] Get:4239 http://deb.debian.org/debian bookworm/main amd64 staden-common all 2.0.0+b11-4 [1972 kB] Get:4240 http://deb.debian.org/debian bookworm/main amd64 staden-io-lib-utils amd64 1.14.15-1 [170 kB] Get:4241 http://deb.debian.org/debian bookworm/main amd64 tklib all 0.8~20230222-1 [1406 kB] Get:4242 http://deb.debian.org/debian bookworm/main amd64 staden amd64 2.0.0+b11-4+b1 [1631 kB] Get:4243 http://deb.debian.org/debian bookworm/main amd64 stringtie amd64 2.2.1+ds-2 [397 kB] Get:4244 http://deb.debian.org/debian bookworm/main amd64 subread amd64 2.0.3+dfsg-1 [770 kB] Get:4245 http://deb.debian.org/debian bookworm/main amd64 suitename amd64 0.4.130509+git20210223.ebb1325-1 [23.9 kB] Get:4246 http://deb.debian.org/debian bookworm/main amd64 sumaclust amd64 1.0.36+ds-2 [103 kB] Get:4247 http://deb.debian.org/debian bookworm/main amd64 sumatra amd64 1.0.36+ds-2 [80.4 kB] Get:4248 http://deb.debian.org/debian bookworm/main amd64 sumtrees all 4.5.2-1 [184 kB] Get:4249 http://deb.debian.org/debian bookworm/main amd64 surankco all 0.0.r5+dfsg-3 [78.5 kB] Get:4250 http://deb.debian.org/debian bookworm/main amd64 survivor amd64 1.0.7-4 [305 kB] Get:4251 http://deb.debian.org/debian bookworm/main amd64 surpyvor all 0.5-2 [9776 B] Get:4252 http://deb.debian.org/debian bookworm/main amd64 svim all 2.0.0-3 [34.4 kB] Get:4253 http://deb.debian.org/debian bookworm/main amd64 swarm amd64 3.1.2+dfsg-1 [632 kB] Get:4254 http://deb.debian.org/debian bookworm/main amd64 sweed amd64 3.2.1+dfsg-5 [65.0 kB] Get:4255 http://deb.debian.org/debian bookworm/main amd64 tantan amd64 40-1 [40.2 kB] Get:4256 http://deb.debian.org/debian bookworm/main amd64 tcllib all 1.21+dfsg-1 [4597 kB] Get:4257 http://deb.debian.org/debian bookworm/main amd64 teckit amd64 2.5.11+ds1-1+b1 [700 kB] Get:4258 http://deb.debian.org/debian bookworm/main amd64 terraphast amd64 0.0+git20200413.8af2e4c+dfsg-2 [53.3 kB] Get:4259 http://deb.debian.org/debian bookworm/main amd64 tex-gyre all 20180621-6 [6209 kB] Get:4260 http://deb.debian.org/debian bookworm/main amd64 texlive-fonts-recommended all 2022.20230122-3 [4988 kB] Get:4261 http://deb.debian.org/debian bookworm/main amd64 texlive-lang-greek all 2022.20230122-1 [78.1 MB] Get:4262 http://deb.debian.org/debian bookworm/main amd64 texlive-latex-recommended all 2022.20230122-3 [8880 kB] Get:4263 http://deb.debian.org/debian bookworm/main amd64 texlive-pictures all 2022.20230122-3 [15.8 MB] Get:4264 http://deb.debian.org/debian bookworm/main amd64 texlive-latex-extra all 2022.20230122-4 [19.2 MB] Get:4265 http://deb.debian.org/debian bookworm/main amd64 texlive-plain-generic all 2022.20230122-4 [28.9 MB] Get:4266 http://deb.debian.org/debian bookworm/main amd64 texlive-science all 2022.20230122-4 [3722 kB] Get:4267 http://deb.debian.org/debian bookworm/main amd64 tipa all 2:1.3-21 [2974 kB] Get:4268 http://deb.debian.org/debian bookworm/main amd64 texlive-xetex all 2022.20230122-3 [11.4 MB] Get:4269 http://deb.debian.org/debian bookworm/main amd64 theseus amd64 3.3.0-14 [383 kB] Get:4270 http://deb.debian.org/debian bookworm/main amd64 thesias amd64 3.1.1-1 [173 kB] Get:4271 http://deb.debian.org/debian bookworm/main amd64 tiddit amd64 3.5.2+dfsg-1 [272 kB] Get:4272 http://deb.debian.org/debian bookworm/main amd64 tigr-glimmer amd64 3.02b-6+b1 [283 kB] Get:4273 http://deb.debian.org/debian bookworm/main amd64 tm-align amd64 20190822+dfsg-2 [865 kB] Get:4274 http://deb.debian.org/debian bookworm/main amd64 tnseq-transit amd64 3.2.7-1 [9029 kB] Get:4275 http://deb.debian.org/debian bookworm/main amd64 toil all 5.9.2-2+deb12u1 [675 kB] Get:4276 http://deb.debian.org/debian bookworm/main amd64 tombo amd64 1.5.1-4+b1 [428 kB] Get:4277 http://deb.debian.org/debian bookworm/main amd64 tophat-recondition all 1.4-3 [11.1 kB] Get:4278 http://deb.debian.org/debian bookworm/main amd64 toppred amd64 1.10-10 [44.4 kB] Get:4279 http://deb.debian.org/debian bookworm/main amd64 tortoize amd64 2.0.11-1 [769 kB] Get:4280 http://deb.debian.org/debian bookworm/main amd64 trace2dbest all 3.0.1-2 [29.9 kB] Get:4281 http://deb.debian.org/debian bookworm/main amd64 tracetuner amd64 3.0.6~beta+dfsg-3 [344 kB] Get:4282 http://deb.debian.org/debian bookworm/main amd64 transdecoder all 5.0.1-5 [187 kB] Get:4283 http://deb.debian.org/debian bookworm/main amd64 transrate-tools amd64 1.0.0-5 [279 kB] Get:4284 http://deb.debian.org/debian bookworm/main amd64 transtermhp amd64 2.09-5 [131 kB] Get:4285 http://deb.debian.org/debian bookworm/main amd64 tree-puzzle amd64 5.3~rc16+dfsg-9 [172 kB] Get:4286 http://deb.debian.org/debian bookworm/main amd64 tree-puzzle-doc all 5.3~rc16+dfsg-9 [433 kB] Get:4287 http://deb.debian.org/debian bookworm/main amd64 treeview all 1.2.0+dfsg-1 [2745 kB] Get:4288 http://deb.debian.org/debian bookworm/main amd64 treeviewx amd64 0.5.1+git20100823.7e4d0e9-4+b2 [191 kB] Get:4289 http://deb.debian.org/debian bookworm/main amd64 trf amd64 4.09.1-6 [58.2 kB] Get:4290 http://deb.debian.org/debian bookworm/main amd64 tvc amd64 5.0.3+git20151221.80e144e+dfsg-5 [1074 kB] Get:4291 http://deb.debian.org/debian bookworm/main amd64 twopaco amd64 1.0.0+dfsg-1 [388 kB] Get:4292 http://deb.debian.org/debian bookworm/main amd64 uc-echo amd64 1.12-18 [77.1 kB] Get:4293 http://deb.debian.org/debian bookworm/main amd64 umap-learn all 0.5.3+dfsg-2 [111 kB] Get:4294 http://deb.debian.org/debian bookworm/main amd64 umis amd64 1.0.8-3+b1 [26.6 kB] Get:4295 http://deb.debian.org/debian bookworm/main amd64 uncalled amd64 2.2+ds1-1+b3 [551 kB] Get:4296 http://deb.debian.org/debian bookworm/main amd64 unicycler amd64 0.5.0+dfsg-1 [863 kB] Get:4297 http://deb.debian.org/debian bookworm/main amd64 unicycler-data all 0.5.0+dfsg-1 [12.0 MB] Get:4298 http://deb.debian.org/debian bookworm/main amd64 unikmer amd64 0.19.1-1+b3 [2527 kB] Get:4299 http://deb.debian.org/debian bookworm/main amd64 usb-modeswitch-data all 20191128-5 [47.9 kB] Get:4300 http://deb.debian.org/debian bookworm/main amd64 usb-modeswitch amd64 2.6.1-3+b1 [59.6 kB] Get:4301 http://deb.debian.org/debian bookworm/main amd64 va-driver-all amd64 2.17.0-1 [12.8 kB] Get:4302 http://deb.debian.org/debian bookworm/main amd64 vcfanno amd64 0.3.5+ds-1+b3 [2248 kB] Get:4303 http://deb.debian.org/debian bookworm/main amd64 vdpau-driver-all amd64 1.5-2 [4348 B] Get:4304 http://deb.debian.org/debian bookworm/main amd64 velvetoptimiser all 2.2.6-5 [26.7 kB] Get:4305 http://deb.debian.org/debian bookworm/main amd64 vim-addon-manager all 0.5.10 [19.9 kB] Get:4306 http://deb.debian.org/debian bookworm/main amd64 virulencefinder all 2.0.4-3 [12.1 kB] Get:4307 http://deb.debian.org/debian bookworm/main amd64 vmatch amd64 2.3.1+dfsg-8 [426 kB] Get:4308 http://deb.debian.org/debian bookworm/main amd64 vt amd64 0.57721+ds-3 [774 kB] Get:4309 http://deb.debian.org/debian bookworm/main amd64 wham-align amd64 0.1.5-8 [156 kB] Get:4310 http://deb.debian.org/debian bookworm/main amd64 wise-data all 2.4.1-23 [78.2 kB] Get:4311 http://deb.debian.org/debian bookworm/main amd64 wise amd64 2.4.1-23 [994 kB] Get:4312 http://deb.debian.org/debian bookworm/main amd64 wpasupplicant amd64 2:2.10-12 [1418 kB] Get:4313 http://deb.debian.org/debian bookworm/main amd64 x11-xserver-utils amd64 7.7+9+b1 [169 kB] Get:4314 http://deb.debian.org/debian bookworm/main amd64 xdg-desktop-portal amd64 1.16.0-2 [332 kB] Get:4315 http://deb.debian.org/debian bookworm/main amd64 xdg-desktop-portal-gtk amd64 1.14.1-1 [132 kB] Get:4316 http://deb.debian.org/debian bookworm/main amd64 xdg-user-dirs amd64 0.18-1 [54.4 kB] Get:4317 http://deb.debian.org/debian bookworm/main amd64 xfonts-100dpi all 1:1.0.5 [3819 kB] Get:4318 http://deb.debian.org/debian bookworm/main amd64 xpore all 2.1-1 [30.5 kB] Get:4319 http://deb.debian.org/debian bookworm/main amd64 xsltproc amd64 1.1.35-1 [126 kB] Get:4320 http://deb.debian.org/debian bookworm/main amd64 xxd amd64 2:9.0.1378-2 [83.7 kB] Get:4321 http://deb.debian.org/debian bookworm/main amd64 yaha amd64 0.1.83-3 [44.0 kB] Get:4322 http://deb.debian.org/debian bookworm/main amd64 yanagiba all 1.0.0-5 [25.6 kB] Get:4323 http://deb.debian.org/debian bookworm/main amd64 yanosim amd64 0.1-5 [9624 B] Get:4324 http://deb.debian.org/debian bookworm/main amd64 yelp-xsl all 42.1-2 [469 kB] Get:4325 http://deb.debian.org/debian bookworm/main amd64 yelp amd64 42.2-1 [789 kB] Get:4326 http://deb.debian.org/debian bookworm/main amd64 zenity-common all 3.44.0-1 [2974 kB] Get:4327 http://deb.debian.org/debian bookworm/main amd64 zenity amd64 3.44.0-1 [63.2 kB] Get:4328 http://deb.debian.org/debian bookworm/main amd64 zutty amd64 0.14.0.20230218+dfsg1-1 [177 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4745 MB in 35s (137 MB/s) Selecting previously unselected package libssl3:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6102 files and directories currently installed.) Preparing to unpack .../00-libssl3_3.0.11-1~deb12u2_amd64.deb ... Unpacking libssl3:amd64 (3.0.11-1~deb12u2) ... Selecting previously unselected package libargon2-1:amd64. Preparing to unpack .../01-libargon2-1_0~20171227-0.3+deb12u1_amd64.deb ... Unpacking libargon2-1:amd64 (0~20171227-0.3+deb12u1) ... Selecting previously unselected package dmsetup. Preparing to unpack .../02-dmsetup_2%3a1.02.185-2_amd64.deb ... Unpacking dmsetup (2:1.02.185-2) ... Selecting previously unselected package libdevmapper1.02.1:amd64. Preparing to unpack .../03-libdevmapper1.02.1_2%3a1.02.185-2_amd64.deb ... Unpacking libdevmapper1.02.1:amd64 (2:1.02.185-2) ... Selecting previously unselected package libjson-c5:amd64. Preparing to unpack .../04-libjson-c5_0.16-2_amd64.deb ... Unpacking libjson-c5:amd64 (0.16-2) ... Selecting previously unselected package libcryptsetup12:amd64. Preparing to unpack .../05-libcryptsetup12_2%3a2.6.1-4~deb12u2_amd64.deb ... Unpacking libcryptsetup12:amd64 (2:2.6.1-4~deb12u2) ... Selecting previously unselected package libfdisk1:amd64. Preparing to unpack .../06-libfdisk1_2.38.1-5+b1_amd64.deb ... Unpacking libfdisk1:amd64 (2.38.1-5+b1) ... Selecting previously unselected package libkmod2:amd64. Preparing to unpack .../07-libkmod2_30+20221128-1_amd64.deb ... Unpacking libkmod2:amd64 (30+20221128-1) ... Selecting previously unselected package libapparmor1:amd64. Preparing to unpack .../08-libapparmor1_3.0.8-3_amd64.deb ... Unpacking libapparmor1:amd64 (3.0.8-3) ... Selecting previously unselected package libip4tc2:amd64. Preparing to unpack .../09-libip4tc2_1.8.9-2_amd64.deb ... Unpacking libip4tc2:amd64 (1.8.9-2) ... Selecting previously unselected package libsystemd-shared:amd64. Preparing to unpack .../10-libsystemd-shared_252.22-1~deb12u1_amd64.deb ... Unpacking libsystemd-shared:amd64 (252.22-1~deb12u1) ... Setting up libssl3:amd64 (3.0.11-1~deb12u2) ... Selecting previously unselected package systemd. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6189 files and directories currently installed.) Preparing to unpack .../systemd_252.22-1~deb12u1_amd64.deb ... Unpacking systemd (252.22-1~deb12u1) ... Setting up libargon2-1:amd64 (0~20171227-0.3+deb12u1) ... Setting up libjson-c5:amd64 (0.16-2) ... Setting up libfdisk1:amd64 (2.38.1-5+b1) ... Setting up libkmod2:amd64 (30+20221128-1) ... Setting up libapparmor1:amd64 (3.0.8-3) ... Setting up libip4tc2:amd64 (1.8.9-2) ... Setting up libsystemd-shared:amd64 (252.22-1~deb12u1) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.185-2) ... Setting up libcryptsetup12:amd64 (2:2.6.1-4~deb12u2) ... Setting up systemd (252.22-1~deb12u1) ... Created symlink /etc/systemd/system/getty.target.wants/getty@tty1.service → /lib/systemd/system/getty@.service. Created symlink /etc/systemd/system/multi-user.target.wants/remote-fs.target → /lib/systemd/system/remote-fs.target. Created symlink /etc/systemd/system/sysinit.target.wants/systemd-pstore.service → /lib/systemd/system/systemd-pstore.service. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. "/home" already exists and is not a directory. Setting up dmsetup (2:1.02.185-2) ... Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7037 files and directories currently installed.) Preparing to unpack .../00-systemd-sysv_252.22-1~deb12u1_amd64.deb ... Unpacking systemd-sysv (252.22-1~deb12u1) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../01-libdbus-1-3_1.14.10-1~deb12u1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.14.10-1~deb12u1) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../02-dbus-bin_1.14.10-1~deb12u1_amd64.deb ... Unpacking dbus-bin (1.14.10-1~deb12u1) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../03-dbus-session-bus-common_1.14.10-1~deb12u1_all.deb ... Unpacking dbus-session-bus-common (1.14.10-1~deb12u1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../04-libexpat1_2.5.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-1) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../05-dbus-daemon_1.14.10-1~deb12u1_amd64.deb ... Unpacking dbus-daemon (1.14.10-1~deb12u1) ... Selecting previously unselected package dbus-system-bus-common. Preparing to unpack .../06-dbus-system-bus-common_1.14.10-1~deb12u1_all.deb ... Unpacking dbus-system-bus-common (1.14.10-1~deb12u1) ... Selecting previously unselected package dbus. Preparing to unpack .../07-dbus_1.14.10-1~deb12u1_amd64.deb ... Unpacking dbus (1.14.10-1~deb12u1) ... Selecting previously unselected package perl-modules-5.36. Preparing to unpack .../08-perl-modules-5.36_5.36.0-7+deb12u1_all.deb ... Unpacking perl-modules-5.36 (5.36.0-7+deb12u1) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../09-libgdbm6_1.23-3_amd64.deb ... Unpacking libgdbm6:amd64 (1.23-3) ... Selecting previously unselected package libgdbm-compat4:amd64. Preparing to unpack .../10-libgdbm-compat4_1.23-3_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.23-3) ... Selecting previously unselected package libperl5.36:amd64. Preparing to unpack .../11-libperl5.36_5.36.0-7+deb12u1_amd64.deb ... Unpacking libperl5.36:amd64 (5.36.0-7+deb12u1) ... Selecting previously unselected package perl. Preparing to unpack .../12-perl_5.36.0-7+deb12u1_amd64.deb ... Unpacking perl (5.36.0-7+deb12u1) ... Selecting previously unselected package libapr1:amd64. Preparing to unpack .../13-libapr1_1.7.2-3_amd64.deb ... Unpacking libapr1:amd64 (1.7.2-3) ... Selecting previously unselected package libaprutil1:amd64. Preparing to unpack .../14-libaprutil1_1.6.3-1_amd64.deb ... Unpacking libaprutil1:amd64 (1.6.3-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../15-libsqlite3-0_3.40.1-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.40.1-2) ... Selecting previously unselected package libaprutil1-dbd-sqlite3:amd64. Preparing to unpack .../16-libaprutil1-dbd-sqlite3_1.6.3-1_amd64.deb ... Unpacking libaprutil1-dbd-sqlite3:amd64 (1.6.3-1) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../17-libsasl2-modules-db_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../18-libsasl2-2_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../19-libldap-2.5-0_2.5.13+dfsg-5_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Selecting previously unselected package libaprutil1-ldap:amd64. Preparing to unpack .../20-libaprutil1-ldap_1.6.3-1_amd64.deb ... Unpacking libaprutil1-ldap:amd64 (1.6.3-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../21-libbrotli1_1.0.9-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b6) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../22-libkrb5support0_1.20.1-2+deb12u1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-2+deb12u1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../23-libk5crypto3_1.20.1-2+deb12u1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-2+deb12u1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../24-libkeyutils1_1.6.3-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-2) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../25-libkrb5-3_1.20.1-2+deb12u1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-2+deb12u1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../26-libgssapi-krb5-2_1.20.1-2+deb12u1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-2+deb12u1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../27-libnghttp2-14_1.52.0-1+deb12u1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.52.0-1+deb12u1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../28-libpsl5_0.21.2-1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.2-1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../29-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../30-libssh2-1_1.10.0-3+b1_amd64.deb ... Unpacking libssh2-1:amd64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../31-libcurl4_7.88.1-10+deb12u5_amd64.deb ... Unpacking libcurl4:amd64 (7.88.1-10+deb12u5) ... Selecting previously unselected package libjansson4:amd64. Preparing to unpack .../32-libjansson4_2.14-2_amd64.deb ... Unpacking libjansson4:amd64 (2.14-2) ... Selecting previously unselected package liblua5.3-0:amd64. Preparing to unpack .../33-liblua5.3-0_5.3.6-2_amd64.deb ... Unpacking liblua5.3-0:amd64 (5.3.6-2) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../34-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../35-libxml2_2.9.14+dfsg-1.3~deb12u1_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... 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Unpacking libgpgme11:amd64 (1.18.0-3+b1) ... Selecting previously unselected package libmaus2-2:amd64. Preparing to unpack .../0748-libmaus2-2_2.0.813+ds-1_amd64.deb ... Unpacking libmaus2-2:amd64 (2.0.813+ds-1) ... Selecting previously unselected package biobambam2. Preparing to unpack .../0749-biobambam2_2.0.185+ds-1_amd64.deb ... Unpacking biobambam2 (2.0.185+ds-1) ... Selecting previously unselected package libtest-deep-perl. Preparing to unpack .../0750-libtest-deep-perl_1.204-1_all.deb ... Unpacking libtest-deep-perl (1.204-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../0751-libcapture-tiny-perl_0.48-2_all.deb ... Unpacking libcapture-tiny-perl (0.48-2) ... Selecting previously unselected package libalgorithm-diff-perl. Preparing to unpack .../0752-libalgorithm-diff-perl_1.201-1_all.deb ... Unpacking libalgorithm-diff-perl (1.201-1) ... Selecting previously unselected package libtext-diff-perl. 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Selecting previously unselected package libhtml-tree-perl. Preparing to unpack .../0776-libhtml-tree-perl_5.07-3_all.deb ... Unpacking libhtml-tree-perl (5.07-3) ... Selecting previously unselected package libclone-perl:amd64. Preparing to unpack .../0777-libclone-perl_0.46-1_amd64.deb ... Unpacking libclone-perl:amd64 (0.46-1) ... Selecting previously unselected package libencode-perl:amd64. Preparing to unpack .../0778-libencode-perl_3.19-1+b1_amd64.deb ... Unpacking libencode-perl:amd64 (3.19-1+b1) ... Selecting previously unselected package libio-html-perl. Preparing to unpack .../0779-libio-html-perl_1.004-3_all.deb ... Unpacking libio-html-perl (1.004-3) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../0780-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../0781-libhttp-message-perl_6.44-1_all.deb ... Unpacking libhttp-message-perl (6.44-1) ... Selecting previously unselected package libhttp-cookies-perl. Preparing to unpack .../0782-libhttp-cookies-perl_6.10-1_all.deb ... Unpacking libhttp-cookies-perl (6.10-1) ... Selecting previously unselected package libhttp-negotiate-perl. Preparing to unpack .../0783-libhttp-negotiate-perl_6.01-2_all.deb ... Unpacking libhttp-negotiate-perl (6.01-2) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../0784-perl-openssl-defaults_7+b1_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (7+b1) ... Selecting previously unselected package libnet-ssleay-perl:amd64. Preparing to unpack .../0785-libnet-ssleay-perl_1.92-2+b1_amd64.deb ... Unpacking libnet-ssleay-perl:amd64 (1.92-2+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../0786-libio-socket-ssl-perl_2.081-2_all.deb ... Unpacking libio-socket-ssl-perl (2.081-2) ... 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Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl' Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl' Unpacking libmodule-build-perl (0.423200-1) ... Selecting previously unselected package libchado-perl. Preparing to unpack .../1018-libchado-perl_1.31-6_all.deb ... Unpacking libchado-perl (1.31-6) ... Selecting previously unselected package chado-utils. Preparing to unpack .../1019-chado-utils_1.31-6_all.deb ... Unpacking chado-utils (1.31-6) ... Selecting previously unselected package python3-yaml. Preparing to unpack .../1020-python3-yaml_6.0-3+b2_amd64.deb ... Unpacking python3-yaml (6.0-3+b2) ... Selecting previously unselected package python3-yamlordereddictloader. Preparing to unpack .../1021-python3-yamlordereddictloader_0.4.0-1.1_all.deb ... Unpacking python3-yamlordereddictloader (0.4.0-1.1) ... 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Unpacking python3-requests-oauthlib (1.3.0+ds-1) ... Selecting previously unselected package python3-msrest. Preparing to unpack .../3053-python3-msrest_0.6.21-2_all.deb ... Unpacking python3-msrest (0.6.21-2) ... Selecting previously unselected package python3-adal. Preparing to unpack .../3054-python3-adal_1.2.7-2_all.deb ... Unpacking python3-adal (1.2.7-2) ... Selecting previously unselected package python3-msrestazure. Preparing to unpack .../3055-python3-msrestazure_0.6.4-2_all.deb ... Unpacking python3-msrestazure (0.6.4-2) ... Selecting previously unselected package python3-multidict. Preparing to unpack .../3056-python3-multidict_6.0.4-1+b1_amd64.deb ... Unpacking python3-multidict (6.0.4-1+b1) ... Selecting previously unselected package python3-yarl. Preparing to unpack .../3057-python3-yarl_1.8.2-1+b1_amd64.deb ... Unpacking python3-yarl (1.8.2-1+b1) ... Selecting previously unselected package python3-async-timeout. 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Unpacking racon (1.5.0-3) ... Selecting previously unselected package pinfish. Preparing to unpack .../3089-pinfish_0.1.0+ds-3_amd64.deb ... Unpacking pinfish (0.1.0+ds-3) ... Selecting previously unselected package plink. Preparing to unpack .../3090-plink_1.07+dfsg-4+b1_amd64.deb ... Unpacking plink (1.07+dfsg-4+b1) ... Selecting previously unselected package r-cran-fracdiff. Preparing to unpack .../3091-r-cran-fracdiff_1.5-2-1_amd64.deb ... Unpacking r-cran-fracdiff (1.5-2-1) ... Selecting previously unselected package r-cran-lmtest. Preparing to unpack .../3092-r-cran-lmtest_0.9.40-1_amd64.deb ... Unpacking r-cran-lmtest (0.9.40-1) ... Selecting previously unselected package r-cran-quadprog. Preparing to unpack .../3093-r-cran-quadprog_1.5-8-1+b1_amd64.deb ... Unpacking r-cran-quadprog (1.5-8-1+b1) ... Selecting previously unselected package r-cran-xts. Preparing to unpack .../3094-r-cran-xts_0.13.0-1_amd64.deb ... Unpacking r-cran-xts (0.13.0-1) ... 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Unpacking plink1.9 (1.90~b6.26-220402-1) ... Selecting previously unselected package plink2. Preparing to unpack .../3114-plink2_2.00~a3.5-220809+dfsg-1+b2_amd64.deb ... Unpacking plink2 (2.00~a3.5-220809+dfsg-1+b2) ... Selecting previously unselected package python3-openbabel. Preparing to unpack .../3115-python3-openbabel_3.1.1+dfsg-9+b3_amd64.deb ... Unpacking python3-openbabel (3.1.1+dfsg-9+b3) ... Selecting previously unselected package plip. Preparing to unpack .../3116-plip_2.2.2+dfsg-1_all.deb ... Unpacking plip (2.2.2+dfsg-1) ... Selecting previously unselected package poa. Preparing to unpack .../3117-poa_2.0+20060928-8_amd64.deb ... Unpacking poa (2.0+20060928-8) ... Selecting previously unselected package pocketsphinx-en-us. Preparing to unpack .../3118-pocketsphinx-en-us_0.8+5prealpha+1-15_all.deb ... Unpacking pocketsphinx-en-us (0.8+5prealpha+1-15) ... Selecting previously unselected package populations. 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Selecting previously unselected package python3-biomaj3-process. Preparing to unpack .../3268-python3-biomaj3-process_3.0.19-1_all.deb ... Unpacking python3-biomaj3-process (3.0.19-1) ... Selecting previously unselected package python3-pyasn1. Preparing to unpack .../3269-python3-pyasn1_0.4.8-3_all.deb ... Unpacking python3-pyasn1 (0.4.8-3) ... Selecting previously unselected package python3-ldap3. Preparing to unpack .../3270-python3-ldap3_2.9.1-2_all.deb ... Unpacking python3-ldap3 (2.9.1-2) ... Selecting previously unselected package python3-bson. Preparing to unpack .../3271-python3-bson_3.11.0-1+b5_amd64.deb ... Unpacking python3-bson (3.11.0-1+b5) ... Selecting previously unselected package python3-pymongo. Preparing to unpack .../3272-python3-pymongo_3.11.0-1+b5_amd64.deb ... Unpacking python3-pymongo (3.11.0-1+b5) ... Selecting previously unselected package python3-biomaj3-user. Preparing to unpack .../3273-python3-biomaj3-user_3.0.12-1_all.deb ... Unpacking python3-biomaj3-user (3.0.12-1) ... Selecting previously unselected package python3-influxdb. Preparing to unpack .../3274-python3-influxdb_5.3.1-3_all.deb ... Unpacking python3-influxdb (5.3.1-3) ... Selecting previously unselected package python3-yapsy. Preparing to unpack .../3275-python3-yapsy_1.12.0-1.3_all.deb ... Unpacking python3-yapsy (1.12.0-1.3) ... Selecting previously unselected package python3-biomaj3. Preparing to unpack .../3276-python3-biomaj3_3.1.23-1_all.deb ... Unpacking python3-biomaj3 (3.1.23-1) ... Selecting previously unselected package python3-flask-cors. Preparing to unpack .../3277-python3-flask-cors_3.0.10-2_all.deb ... Unpacking python3-flask-cors (3.0.10-2) ... Selecting previously unselected package python3-biomaj3-daemon. Preparing to unpack .../3278-python3-biomaj3-daemon_3.0.24-2_all.deb ... Unpacking python3-biomaj3-daemon (3.0.24-2) ... Selecting previously unselected package python3-biotools. 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Unpacking python3-slow5 (0.7.0+dfsg-2+b1) ... Selecting previously unselected package python3-sparqlwrapper. Preparing to unpack .../3407-python3-sparqlwrapper_1.8.5-2_all.deb ... Unpacking python3-sparqlwrapper (1.8.5-2) ... Selecting previously unselected package python3-sqlalchemy-ext:amd64. Preparing to unpack .../3408-python3-sqlalchemy-ext_1.4.46+ds1-1+b1_amd64.deb ... Unpacking python3-sqlalchemy-ext:amd64 (1.4.46+ds1-1+b1) ... Selecting previously unselected package python3-sqt. Preparing to unpack .../3409-python3-sqt_0.8.0-6+b1_amd64.deb ... Unpacking python3-sqt (0.8.0-6+b1) ... Selecting previously unselected package python3-statsmodels-lib:amd64. Preparing to unpack .../3410-python3-statsmodels-lib_0.13.5+dfsg-7_amd64.deb ... Unpacking python3-statsmodels-lib:amd64 (0.13.5+dfsg-7) ... Selecting previously unselected package python3-statsmodels. Preparing to unpack .../3411-python3-statsmodels_0.13.5+dfsg-7_all.deb ... Unpacking python3-statsmodels (0.13.5+dfsg-7) ... 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Selecting previously unselected package r-bioc-delayedmatrixstats. Preparing to unpack .../3497-r-bioc-delayedmatrixstats_1.20.0+ds-1_all.deb ... Unpacking r-bioc-delayedmatrixstats (1.20.0+ds-1) ... Selecting previously unselected package r-bioc-dirichletmultinomial. Preparing to unpack .../3498-r-bioc-dirichletmultinomial_1.40.0-1_amd64.deb ... Unpacking r-bioc-dirichletmultinomial (1.40.0-1) ... Selecting previously unselected package r-cran-blockmodeling. Preparing to unpack .../3499-r-cran-blockmodeling_1.1.4-1_amd64.deb ... Unpacking r-cran-blockmodeling (1.1.4-1) ... Selecting previously unselected package r-bioc-ebseq. Preparing to unpack .../3500-r-bioc-ebseq_1.38.0-1_all.deb ... Unpacking r-bioc-ebseq (1.38.0-1) ... Selecting previously unselected package r-bioc-limma. Preparing to unpack .../3501-r-bioc-limma_3.54.1+dfsg-1_amd64.deb ... Unpacking r-bioc-limma (3.54.1+dfsg-1) ... Selecting previously unselected package r-bioc-edger. 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Selecting previously unselected package r-cran-fontbitstreamvera. Preparing to unpack .../3675-r-cran-fontbitstreamvera_0.1.1+dfsg-4_all.deb ... Unpacking r-cran-fontbitstreamvera (0.1.1+dfsg-4) ... Selecting previously unselected package r-cran-fontliberation. Preparing to unpack .../3676-r-cran-fontliberation_0.1.0+dfsg-4_all.deb ... Unpacking r-cran-fontliberation (0.1.0+dfsg-4) ... Selecting previously unselected package r-cran-fontquiver. Preparing to unpack .../3677-r-cran-fontquiver_0.2.1-3_all.deb ... Unpacking r-cran-fontquiver (0.2.1-3) ... Selecting previously unselected package r-cran-formattable. Preparing to unpack .../3678-r-cran-formattable_0.2.1+dfsg-1_all.deb ... Unpacking r-cran-formattable (0.2.1+dfsg-1) ... Selecting previously unselected package r-cran-fts. Preparing to unpack .../3679-r-cran-fts_0.9.9.2-2_amd64.deb ... Unpacking r-cran-fts (0.9.9.2-2) ... Selecting previously unselected package r-cran-furrr. 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Unpacking resfinder-db (0.0+git20220524.fa32d9a-1) ... Selecting previously unselected package resfinder. Preparing to unpack .../3920-resfinder_4.3.0-1_all.deb ... Unpacking resfinder (4.3.0-1) ... Selecting previously unselected package rnahybrid. Preparing to unpack .../3921-rnahybrid_2.1.2-7_amd64.deb ... Unpacking rnahybrid (2.1.2-7) ... Selecting previously unselected package roary. Preparing to unpack .../3922-roary_3.13.0+dfsg-1_all.deb ... Unpacking roary (3.13.0+dfsg-1) ... Selecting previously unselected package rockhopper. Preparing to unpack .../3923-rockhopper_2.0.3+dfsg2-3_all.deb ... Unpacking rockhopper (2.0.3+dfsg2-3) ... Selecting previously unselected package roguenarok. Preparing to unpack .../3924-roguenarok_1.0.1-3_amd64.deb ... Unpacking roguenarok (1.0.1-3) ... Selecting previously unselected package rsem. Preparing to unpack .../3925-rsem_1.3.3+dfsg-2+b1_amd64.deb ... Unpacking rsem (1.3.3+dfsg-2+b1) ... Selecting previously unselected package rtax. 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Unpacking trimmomatic (0.39+dfsg-2) ... Selecting previously unselected package shovill. Preparing to unpack .../3959-shovill_1.1.0-9_amd64.deb ... Unpacking shovill (1.1.0-9) ... Selecting previously unselected package sibelia. Preparing to unpack .../3960-sibelia_3.0.7+dfsg-3_amd64.deb ... Unpacking sibelia (3.0.7+dfsg-3) ... Selecting previously unselected package sibsim4. Preparing to unpack .../3961-sibsim4_0.20-5_amd64.deb ... Unpacking sibsim4 (0.20-5) ... Selecting previously unselected package sickle. Preparing to unpack .../3962-sickle_1.33+git20150314.f3d6ae3-2_amd64.deb ... Unpacking sickle (1.33+git20150314.f3d6ae3-2) ... Selecting previously unselected package sigma-align. Preparing to unpack .../3963-sigma-align_1.1.3-8_amd64.deb ... Unpacking sigma-align (1.1.3-8) ... Selecting previously unselected package sim4. Preparing to unpack .../3964-sim4_0.0.20121010-8_amd64.deb ... Unpacking sim4 (0.0.20121010-8) ... Selecting previously unselected package simka. 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Unpacking spaln (2.4.13f+dfsg-1) ... Selecting previously unselected package spoa. Preparing to unpack .../3985-spoa_4.0.8-1_amd64.deb ... Unpacking spoa (4.0.8-1) ... Selecting previously unselected package time. Preparing to unpack .../3986-time_1.9-0.2_amd64.deb ... Unpacking time (1.9-0.2) ... Selecting previously unselected package sprai. Preparing to unpack .../3987-sprai_0.9.9.23+dfsg1-2_amd64.deb ... Unpacking sprai (0.9.9.23+dfsg1-2) ... Selecting previously unselected package spread-phy. Preparing to unpack .../3988-spread-phy_1.0.7+dfsg-5_all.deb ... Unpacking spread-phy (1.0.7+dfsg-5) ... Selecting previously unselected package squizz. Preparing to unpack .../3989-squizz_0.99d+dfsg-3_amd64.deb ... Unpacking squizz (0.99d+dfsg-3) ... Selecting previously unselected package srst2. Preparing to unpack .../3990-srst2_0.2.0-9_amd64.deb ... Unpacking srst2 (0.2.0-9) ... Selecting previously unselected package ssake. Preparing to unpack .../3991-ssake_4.0.1-1_all.deb ... 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Setting up autodock (4.2.6-9) ... ---------------------------------------------------------------------- ______ / \ / \ / \ \ /\ / \ / \ / \/ /\ \/ / \ /____\ AutoDock and AutoGrid are free software, distributed under the terms of the GNU General Public License 2 or later. This allows us to share the code and to be open for improvement from the whole scientific community. The development of the AutoDock suite is entirely funded by research grants. For that reason, we ask you to register at the AutoDock Registration page http://autodock.scripps.edu/downloads/autodock-registration in order to keep track of number of unique downloads, which we use to support the grant applications. Installing the Debian popularity-contest package is also encouraged. Thank you, and happy docking! The AutoDock Development Team If you plan to use AutoDock for commercial purposes we encourage donations to the Olson laboratory to help support further development of the AutoDock 4 suite of programs. 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Setting up bash-completion (1:2.11-6) ... Setting up scythe (0.994+git20141017.20d3cff-3) ... Setting up proda (1.0-13) ... Setting up sim4 (0.0.20121010-8) ... Setting up libjansi-java (2.4.0-2) ... Setting up spaced (1.2.0-201605+dfsg-3) ... Setting up libpathplan4:amd64 (2.42.2-7+b3) ... Setting up aglfn (1.7+git20191031.4036a9c-2) ... Setting up libapache-pom-java (29-2) ... Setting up ntcard (1.2.2+dfsg-5) ... Setting up libavahi-common-data:amd64 (0.8-10) ... Setting up libxpp3-java (1.1.4c-3) ... Setting up libann0 (1.1.2+doc-9+b1) ... Setting up libncurses6:amd64 (6.4-4) ... Setting up libatinject-jsr330-api-java (1.0+ds1-5) ... Setting up libgles1:amd64 (1.6.0-1) ... Setting up ncbi-entrez-direct (19.0.20230216+dfsg-2+b1) ... Setting up libdbus-1-3:amd64 (1.14.10-1~deb12u1) ... Setting up ruby-net-telnet (0.2.0-1) ... Setting up liblzf1:amd64 (3.6-3) ... Setting up xz-utils (5.4.1-0.2) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libopenexr-3-1-30:amd64 (3.1.5-5) ... Setting up libwebsocket-api-java (1.1-2) ... Setting up zenity-common (3.44.0-1) ... Setting up libfribidi0:amd64 (1.0.8-2.1) ... Setting up libopus0:amd64 (1.3.1-3) ... Setting up t1utils (1.41-4) ... Setting up libquadmath0:amd64 (12.2.0-14) ... Setting up libmuscle-dev (3.7+4565-7) ... Setting up libzeus-jscl-java (1.72-2) ... Setting up libfaad2:amd64 (2.10.1-1) ... Setting up skewer (0.2.2-6+b1) ... Setting up libtexlua53-5:amd64 (2022.20220321.62855-5.1+deb12u1) ... Setting up libexif12:amd64 (0.6.24-1+b1) ... Setting up fastdnaml (1.2.2-15) ... Setting up libimagequant0:amd64 (2.17.0-1) ... Setting up seqan-apps (2.4.0+dfsg-15) ... Setting up libproc2-0:amd64 (2:4.0.2-3) ... Setting up pymol-data (2.5.0+dfsg-1) ... Setting up libplexus-interpolation-java (1.26-1) ... Setting up libjs-d3 (3.5.17-4) ... Setting up lambda-align2 (2.0.0-9) ... Setting up libjs-codemirror (5.65.0+~cs5.83.9-2) ... Setting up libbambamc0:amd64 (0.0.50-6+b1) ... Setting up icc-profiles-free (2.0.1+dfsg-1.1) ... Setting up libthread-pool-dev (4.0.0-1) ... Setting up intel-media-va-driver:amd64 (23.1.1+dfsg1-1) ... Setting up libssl-dev:amd64 (3.0.11-1~deb12u2) ... Setting up libpng16-16:amd64 (1.6.39-2) ... Setting up libspoa7.0.0:amd64 (4.0.8-1) ... Setting up assembly-stats (1.0.1+ds-6) ... Setting up libitext5-java (5.5.13.3-2) ... Setting up libhwloc15:amd64 (2.9.0-1) ... Setting up libxml-commons-resolver1.1-java (1.2-11) ... Setting up libpcre32-3:amd64 (2:8.39-15) ... Setting up usb-modeswitch-data (20191128-5) ... Setting up libmpc3:amd64 (1.3.1-1) ... Setting up libmnl0:amd64 (1.0.4-3) ... Setting up systemd-timesyncd (252.22-1~deb12u1) ... Creating group 'systemd-timesync' with GID 997. Creating user 'systemd-timesync' (systemd Time Synchronization) with UID 997 and GID 997. Created symlink /etc/systemd/system/dbus-org.freedesktop.timesync1.service → /lib/systemd/system/systemd-timesyncd.service. Created symlink /etc/systemd/system/sysinit.target.wants/systemd-timesyncd.service → /lib/systemd/system/systemd-timesyncd.service. Setting up libevent-core-2.1-7:amd64 (2.1.12-stable-8) ... Setting up libatomic1:amd64 (12.2.0-14) ... Setting up libvorbis0a:amd64 (1.3.7-1) ... Setting up paraclu (10-1) ... Setting up libxz-java (1.9-1) ... Setting up udev (252.22-1~deb12u1) ... A chroot environment has been detected, udev not started. Setting up libitext1-java (1.4-7) ... Setting up libidn12:amd64 (1.41-1) ... Setting up libevent-2.1-7:amd64 (2.1.12-stable-8) ... Setting up libmmdb2-dev (2.0.22-1) ... Setting up swi-prolog-core (9.0.4+dfsg-2) ... update-alternatives: using /usr/bin/swipl to provide /usr/bin/prolog (prolog) in auto mode Setting up f2j (0.8.1+dfsg-5) ... Setting up patch (2.7.6-7) ... Setting up libmeryl-dev (0~20150903+r2013-8+b3) ... Setting up liborc-0.4-0:amd64 (1:0.4.33-2) ... Setting up libcommons-pool-java (1.6-4) ... Setting up plast (2.3.2+dfsg-10+b2) ... Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ... Setting up dwgsim (0.1.14-2) ... Setting up node-d3-collection (1.0.7-5) ... Setting up libboost-random1.74.0:amd64 (1.74.0+ds1-21) ... Setting up autopoint (0.21-12) ... Setting up libmariadb-java (2.7.6-1) ... Setting up binfmt-support (2.2.2-2) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Created symlink /etc/systemd/system/multi-user.target.wants/binfmt-support.service → /lib/systemd/system/binfmt-support.service. Setting up libjsoncpp25:amd64 (1.9.5-4) ... Setting up libtagsoup-java (1.2.1+-1.1) ... Setting up libjs-jed (1.1.1-4) ... Setting up libsc-data (2.3.1-22) ... Setting up icu-devtools (72.1-3) ... Setting up libipt2 (2.0.5-1) ... Setting up libgeos-c1v5:amd64 (3.11.1-1) ... Setting up libmariadb3:amd64 (1:10.11.6-0+deb12u1) ... Setting up fonts-dejavu-core (2.37-6) ... Setting up unixodbc-common (2.3.11-2+deb12u1) ... Setting up libslow5-0:amd64 (0.7.0+dfsg-2+b1) ... Setting up libsocket++1:amd64 (1.12.13+git20131030.5d039ba-1+b1) ... Setting up libcqrlib2:amd64 (1.1.4-3) ... Setting up libjbzip2-java (0.9.1-8) ... Setting up libccp4c0:amd64 (8.0.0-2) ... Setting up libgav1-1:amd64 (0.18.0-1+b1) ... Setting up libpcsclite1:amd64 (1.9.9-2) ... Setting up libdbus-java (2.8-10) ... Setting up libzerg0 (1.0.7-11) ... Setting up libsrf-dev (0.1+dfsg-7) ... Setting up pkgconf-bin (1.8.1-1) ... Setting up kaptive-data (2.0.4-1) ... Setting up fonts-texgyre (20180621-6) ... Setting up libmysql++3v5:amd64 (3.2.5-2.1+b1) ... Setting up libsensors5:amd64 (1:3.6.0-7.1) ... Setting up tree-puzzle-doc (5.3~rc16+dfsg-9) ... Setting up libpbcopper-dev:amd64 (2.0.0+dfsg-2) ... Setting up libintervalstorej-java (1.2+dfsg-5) ... Setting up libaacs0:amd64 (0.11.1-2) ... Setting up libjxl0.7:amd64 (0.7.0-10) ... Setting up libmongodb-java (3.6.3-2) ... Setting up libjcsp-java (1.1-rc4-2.1) ... Setting up libpll-dev (0.3.2-4) ... Setting up libncursesw6:amd64 (6.4-4) ... Setting up libtinyxml2.6.2v5:amd64 (2.6.2-6+deb12u1) ... Setting up wise-data (2.4.1-23) ... Setting up libk5crypto3:amd64 (1.20.1-2+deb12u1) ... Setting up libdisorder-dev:amd64 (0.0.2+git20130809.8062ee1-4+b1) ... Setting up libjs-prototype (1.7.3-1) ... Setting up libfuse3-3:amd64 (3.14.0-4) ... Setting up pocketsphinx-en-us (0.8+5prealpha+1-15) ... Setting up libxtables12:amd64 (1.8.9-2) ... Setting up lynx-common (2.9.0dev.12-1) ... Setting up libpal-java (1.5.1+dfsg-8) ... Setting up libjgraph-java (5.12.4.2+dfsg-7) ... Setting up libisorelax-java (20041111-14) ... Setting up libbamtools2.5.2:amd64 (2.5.2+dfsg-4) ... Setting up libgc1:amd64 (1:8.2.2-3) ... Setting up libdav1d6:amd64 (1.0.0-2) ... Setting up libactivation-java (1.2.0-2) ... Setting up amap-align (2.2+git20080214.600fc29+dfsg-2) ... Setting up libltdl7:amd64 (2.4.7-5) ... Setting up libfftw3-double3:amd64 (3.3.10-1) ... Setting up libhamcrest-java (2.2-1) ... Setting up libcifpp-data (5.0.7.1-1) ... Setting up pscan-tfbs (1.2.2-4+b2) ... Setting up libglapi-mesa:amd64 (22.3.6-1+deb12u1) ... Setting up libjsp-api-java (2.3.4-3) ... Setting up libkpathsea6:amd64 (2022.20220321.62855-5.1+deb12u1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libgfortran5:amd64 (12.2.0-14) ... Setting up libcapnp-0.9.2:amd64 (0.9.2-2) ... Setting up libmtdev1:amd64 (1.1.6-1) ... Setting up libvulkan1:amd64 (1.3.239.0-1) ... Setting up libgatbcore3:amd64 (1.4.2+dfsg-11) ... Setting up libopenh264-7:amd64 (2.3.1+dfsg-3) ... Setting up libbwa-dev (0.7.17-7+b2) ... Setting up libjoda-time-java (2.10.14-1) ... Setting up libmimepull-java (1.9.7-2) ... Setting up node-d3-voronoi (1.1.4-5) ... Setting up libsdsl3:amd64 (2.1.1+dfsg-3) ... Setting up node-d3-dispatch (1.0.6-4) ... Setting up libcpuinfo0:amd64 (0.0~git20220617.082deff-1) ... Setting up libltc11:amd64 (1.3.2-1) ... Setting up libgzstream0:amd64 (1.5+git20171107.9a20658-1+b2) ... Setting up libapfloat-java (1.10.1-2) ... Setting up nodejs-doc (18.13.0+dfsg1-1) ... Setting up savvy-util (2.1.0-2) ... Setting up libwebp7:amd64 (1.2.4-0.2+deb12u1) ... Setting up librubberband2:amd64 (3.1.2+dfsg0-1) ... Setting up libfmt9:amd64 (9.1.0+ds1-2) ... Setting up libmhash2:amd64 (0.9.9.9-9) ... Setting up node-d3-time (1.0.11-6) ... Setting up ruby-webrick (1.8.1-1) ... Setting up libboost-math1.74.0:amd64 (1.74.0+ds1-21) ... Setting up liblzma-dev:amd64 (5.4.1-0.2) ... Setting up libubsan1:amd64 (12.2.0-14) ... Setting up libboost-serialization1.74.0:amd64 (1.74.0+ds1-21) ... Setting up libgif7:amd64 (5.2.1-2.5) ... Setting up libedlib1:amd64 (1.2.7-4+b1) ... Setting up libjfreesvg-java (4.1-2) ... Setting up libantlr3-runtime-java (3.5.3-1) ... Setting up mmseqs2 (14-7e284+ds-1+b2) ... Setting up libodbc2:amd64 (2.3.11-2+deb12u1) ... Setting up libtamuanova-0.2 (0.2-5+b2) ... Setting up spoa (4.0.8-1) ... Setting up liburiparser1:amd64 (0.9.7+dfsg-2) ... Setting up node-commander (9.4.1-1) ... Setting up rate4site (3.0.0-8) ... Setting up xdg-dbus-proxy (0.1.4-3) ... Setting up libbdplus0:amd64 (0.2.0-3) ... Setting up fonts-dejavu-extra (2.37-6) ... Setting up libnuma1:amd64 (2.0.16-1) ... Setting up libpcre2-posix3:amd64 (10.42-1) ... Setting up plink (1.07+dfsg-4+b1) ... Setting up libvidstab1.1:amd64 (1.1.0-2+b1) ... Setting up librostlab3:amd64 (1.0.20-12) ... Setting up libsquid1 (1.9g+cvs20050121-12) ... Setting up profnet-snapfun (1.0.22-8) ... Setting up libtrove3-java (3.0.3-5) ... Setting up librttopo1:amd64 (1.1.0-3) ... Setting up libprotobuf32:amd64 (3.21.12-3) ... Setting up ksh93u+m (1.0.4-3) ... update-alternatives: using /bin/ksh93 to provide /bin/ksh (ksh) in auto mode update-alternatives: using /usr/bin/shcomp93 to provide /usr/bin/shcomp (shcomp) in auto mode Setting up libsrt1.5-gnutls:amd64 (1.5.1-1) ... Setting up libudunits2-data (2.2.28-5) ... Setting up alsa-topology-conf (1.2.5.1-2) ... Setting up loki (2.4.7.4-10) ... Setting up node-d3-array (3.2.0+~cs5.0.6-2) ... Setting up libtag1v5:amd64 (1.13-2) ... Setting up igblast (1.19.0-1+b1) ... Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... Setting up ksh (20230128) ... Setting up libxnnpack0 (0.0~git20220216.ae108ef-2) ... Setting up libfreexl1:amd64 (1.0.6-2) ... Setting up liblqr-1-0:amd64 (0.4.2-2.1) ... Setting up libfreemarker-java (2.3.31-2) ... Setting up fonts-gfs-baskerville (1.1-6) ... Setting up datamash (1.7-2) ... Setting up libjs-d3-format (1:1.4.1-7) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libdv4:amd64 (1.0.0-15) ... Setting up libngs-c++3:amd64 (3.0.3+dfsg-6~deb12u1) ... Setting up ocl-icd-libopencl1:amd64 (2.3.1-1) ... Setting up libsuma1 (1.0.36-3+b1) ... Setting up libduktape207:amd64 (2.7.0-2) ... Setting up libasyncns0:amd64 (0.8-6+b3) ... Setting up libwildmidi2:amd64 (0.4.3-1) ... Setting up libxshmfence1:amd64 (1.3-1) ... Setting up libmm-glib0:amd64 (1.20.4-1) ... Setting up libjsoup-java (1.15.3-1) ... Setting up pigz (2.6-1) ... Setting up paml (4.9j+dfsg-4) ... Setting up subread (2.0.3+dfsg-1) ... Setting up libmail-java (1.6.5-2) ... Setting up ruby-pathname2 (1.8.2-2) ... Setting up at-spi2-common (2.46.0-5) ... Setting up libcommons-math-java (2.2-8) ... Setting up python-biopython-doc (1.80+dfsg-4) ... Setting up libcrypt-dev:amd64 (1:4.4.33-2) ... Setting up libwavpack1:amd64 (5.6.0-1) ... Setting up libphobos2-ldc-shared100:amd64 (1:1.30.0-1+b1) ... Setting up libtiff6:amd64 (4.5.0-6+deb12u1) ... Setting up libbs2b0:amd64 (3.1.0+dfsg-7) ... Setting up bamtools (2.5.2+dfsg-4) ... Setting up dialign-tx (1.0.2-14+b1) ... Setting up swi-prolog-core-packages (9.0.4+dfsg-2) ... Setting up dbus-session-bus-common (1.14.10-1~deb12u1) ... Setting up libasan8:amd64 (12.2.0-14) ... Setting up libfyba0:amd64 (4.1.1-8) ... Setting up snpomatic (1.0-6) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up liblua5.3-0:amd64 (5.3.6-2) ... Setting up pal2nal (14.1-3) ... Setting up libxml-commons-external-java (1.4.01-5) ... Setting up procps (2:4.0.2-3) ... Setting up python-tinycss2-common (1.2.1-2) ... Setting up libxbean-reflect-java (4.5-8) ... Setting up mira-rfam-12s-rrna (4.9.6-7) ... Will install rfam_rrna-21-12 with kmer size 21 as MIRA default rRNA filter in /usr/bin/../share/mira/mhs Installing. This can take a minute or two, please be patient. Done. MIRA can now use the functionality to filter for rRNA during assemblies. MIRABAIT can now use the '-j rrna' option. Setting up libasound2:amd64 (1.2.8-1+b1) ... Setting up libv4lconvert0:amd64 (1.22.1-5+b2) ... Setting up libtingea0:amd64 (21-361-2) ... Setting up sse4.2-support (15.1) ... Setting up libkmlbase1:amd64 (1.3.0-10) ... Setting up liblua5.1-0:amd64 (5.1.5-9) ... Setting up libblosc1:amd64 (1.21.3+ds-1) ... Setting up fonts-liberation (1:1.07.4-11) ... Setting up libjargs-java (1.0.0-5) ... Setting up libnl-3-200:amd64 (3.7.0-0.2+b1) ... Setting up kma (1.4.11-1) ... Setting up libservlet-api-java (4.0.1-2) ... Setting up gpgconf (2.2.40-1.1) ... Setting up seqan-needle (1.0.1.0.0.git.3011926+ds-4) ... Setting up hmmer2 (2.3.2+dfsg-8) ... Setting up libbetter-appframework-java (1.9.2-1.1) ... Setting up librostlab-blast0v5 (1.0.1-13) ... Setting up libpsm2-2 (11.2.185-2) ... Setting up soapdenovo2 (242+dfsg-3) ... Setting up libopentest4j-java (1.2.0-4) ... Setting up openmpi-common (4.1.4-3) ... Setting up daligner (1.0+git20221215.bd26967-1) ... Setting up clustalw (2.1+lgpl-7) ... Setting up r-mathlib (4.2.2.20221110-2) ... Setting up libmd4c0:amd64 (0.4.8-1) ... Setting up libjackson2-core-java (2.14.1-1) ... Setting up libdca0:amd64 (0.0.7-2) ... Setting up libc6-i386 (2.36-9+deb12u4) ... Setting up libzimg2:amd64 (3.0.4+ds1-1) ... Setting up fastml (3.11-3) ... Setting up fonts-lmodern (2.005-1) ... Setting up libfreehep-graphicsio-pdf-java (2.4+dfsg-3) ... Setting up libprotobuf-lite32:amd64 (3.21.12-3) ... Setting up liblua5.4-0:amd64 (5.4.4-3) ... Setting up libopenjp2-7:amd64 (2.5.0-2) ... Setting up git-man (1:2.39.2-1.1) ... Setting up autogrid (4.2.6-9) ... Setting up ncbi-vdb-data (3.0.2+dfsg-2) ... Setting up libopenal-data (1:1.19.1-2) ... Setting up phipack (0.0.20160614-5) ... Setting up libthai-data (0.1.29-1) ... Setting up libgirepository-1.0-1:amd64 (1.74.0-3) ... Setting up libpcg-cpp-dev (0.98.1-2) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up fasttree (2.1.11-2) ... Setting up netbase (6.4) ... Setting up node-bootstrap-sass (3.4.3-2) ... Setting up libsnp-sites1:amd64 (2.5.1-2+b1) ... Setting up libstatgen-dev:amd64 (1.0.15-6) ... Setting up libjson-glib-1.0-common (1.6.6-1) ... Setting up acedb-other (4.9.39+dfsg.02-7+b1) ... Setting up libvpx7:amd64 (1.12.0-1+deb12u2) ... Setting up libcommons-math3-java (3.6.1-3) ... Setting up sgml-base (1.31) ... Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... Setting up libwildmagic-common (5.17+cleaned1-6) ... Setting up libgtk2.0-common (2.24.33-2) ... Setting up libcxsparse3:amd64 (1:5.12.0+dfsg-2) ... Setting up nim (1.6.10-2) ... Setting up libcdt5:amd64 (2.42.2-7+b3) ... Setting up libatk1.0-0:amd64 (2.46.0-5) ... Setting up libkrb5-3:amd64 (1.20.1-2+deb12u1) ... Setting up libcgraph6:amd64 (2.42.2-7+b3) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1) ... Setting up apache2-data (2.4.57-2) ... Setting up spaln (2.4.13f+dfsg-1) ... Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... Setting up libwayland-egl1:amd64 (1.21.0-1) ... Setting up libusb-1.0-0:amd64 (2:1.0.26-1) ... Setting up libdnnl2:amd64 (2.6.3-1) ... Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... Setting up libghemical-data (3.0.0-4.3) ... Setting up libibatis-java (2.3.4.726-6.1) ... Setting up libgphoto2-port12:amd64 (2.5.30-1) ... Setting up squizz (0.99d+dfsg-3) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.2) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libdjvulibre-text (3.5.28-2) ... Setting up libhttpcore-java (4.4.16-1) ... Setting up pandoc-data (2.17.1.1-2~deb12u1) ... Setting up libmuparser2v5:amd64 (2.3.3-0.1) ... Setting up indelible (1.03-5) ... Setting up libgbtools0:amd64 (4.44.1+dfsg-7+b2) ... Setting up libjam-java (0.1.git20180106.740247a+dfsg-1) ... Setting up libtsan2:amd64 (12.2.0-14) ... Setting up libjoptsimple-java (5.0.4-4) ... Setting up vcfanno (0.3.5+ds-1+b3) ... Setting up libopengl-dev:amd64 (1.6.0-1) ... Setting up lambda-align (1.0.3-6) ... Setting up fonts-circos-symbols (0.69.9+dfsg-2) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up dmidecode (3.4-1) ... Setting up libhunspell-1.7-0:amd64 (1.7.1-1) ... Setting up libfreehep-graphicsio-ps-java (2.4+dfsg-3) ... Setting up libcoordgen3:amd64 (3.0.1-1) ... Setting up glib-networking-common (2.74.0-4) ... Setting up node-d3-geo (1.11.9-6) ... Setting up libxerces2-java (2.12.2-1) ... Setting up libgmbal-java (4.0.0-b002-1.1) ... Setting up libbinutils:amd64 (2.40-2) ... Setting up vim-runtime (2:9.0.1378-2) ... Setting up harvest-tools (1.3-8+b2) ... Setting up lsb-release (12.0-1) ... Setting up dbus-system-bus-common (1.14.10-1~deb12u1) ... Setting up profnet-prof (1.0.22-8) ... Setting up libjheatchart-java (0.6-1.1) ... Setting up libjaxp1.3-java (1.3.05-6) ... Setting up elph (1.0.1-5) ... Setting up swig4.0 (4.1.0-0.2) ... Setting up libmfx1:amd64 (22.5.4-1) ... Setting up menu (2.1.49) ... Setting up node-xtend (4.0.2-3) ... Setting up libzeep5.1 (5.1.8-1) ... Setting up libfido2-1:amd64 (1.12.0-2+b1) ... Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... Setting up libboost-python1.74.0 (1.74.0+ds1-21) ... Setting up libisl23:amd64 (0.25-1.1) ... Setting up seqan-raptor (2.0.0.0.git.fecfbca+ds-3) ... Setting up libamtk-5-common (5.6.1-2) ... Setting up libde265-0:amd64 (1.0.11-1+deb12u2) ... Setting up libc-dev-bin (2.36-9+deb12u4) ... Setting up libfann2:amd64 (2.2.0+ds-8) ... Setting up libbpp-seq12:amd64 (2.4.1-9) ... Setting up libdaemon0:amd64 (0.14-7.1) ... Setting up librelaxng-datatype-java (1.0+ds1-3.1) ... Setting up meryl (0~20150903+r2013-8+b3) ... Setting up baitfisher (1.2.7+git20211020.de26d5c+dfsg-1) ... Setting up libdivsufsort3:amd64 (2.0.1-5) ... Setting up libsamplerate0:amd64 (0.2.2-3) ... Setting up timgm6mb-soundfont (1.3-5) ... update-alternatives: using /usr/share/sounds/sf2/TimGM6mb.sf2 to provide /usr/share/sounds/sf2/default-GM.sf2 (default-GM.sf2) in auto mode update-alternatives: using /usr/share/sounds/sf2/TimGM6mb.sf2 to provide /usr/share/sounds/sf3/default-GM.sf3 (default-GM.sf3) in auto mode Setting up libantlr-java (2.7.7+dfsg-12) ... Setting up libpwizlite3:amd64 (3.0.4-1) ... Setting up genometester (4.0+git20200511.91cecb5+dfsg-1) ... Setting up libyaml-snake-java (1.33-2) ... Setting up libpj-java (0.0~20150107+dfsg-4) ... Setting up python-matplotlib-data (3.6.3-1) ... Setting up libnss-mdns:amd64 (0.15.1-3) ... Setting up microbiomeutil-data (20101212+dfsg1-5) ... Setting up openssl (3.0.11-1~deb12u2) ... Setting up libwebpmux3:amd64 (1.2.4-0.2+deb12u1) ... Setting up clonalframeml (1.12-3) ... Setting up parasail (2.6+dfsg-1) ... Setting up libbsd0:amd64 (0.11.7-2) ... Setting up velvet (1.2.10+dfsg1-8) ... Setting up libjsonp-java (1.1.2-3) ... Setting up libdeflate-dev:amd64 (1.14-1) ... Setting up python-cobra-data (0.26.2-1) ... Setting up metastudent-data (2.0.1-8) ... Setting up python3-wheel-whl (0.38.4-2) ... Setting up node-normalize.css (8.0.1-5) ... Setting up tabix (1.16+ds-3) ... Setting up node-d3-transition (1.3.2-6) ... Setting up tigr-glimmer (3.02b-6+b1) ... Setting up libdrm-common (2.4.114-1) ... Setting up libyuv0:amd64 (0.0~git20230123.b2528b0-1) ... Setting up med-all (3.8.1) ... Setting up libcdi-api-java (1.2-3) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libsnappy-jni (1.1.8.3-1) ... Setting up kmc (3.2.1+dfsg-1+b2) ... Setting up libpam-cap:amd64 (1:2.66-4) ... Setting up libjim0.81:amd64 (0.81+dfsg0-2) ... Setting up libemf1:amd64 (1.0.13-5) ... Setting up tantan (40-1) ... Setting up openjfx-source (11.0.11+1-3) ... Setting up dialign (2.2.1-11) ... Setting up vmatch (2.3.1+dfsg-8) ... Setting up libssw0:amd64 (1.1-13) ... Setting up libevdev2:amd64 (1.13.0+dfsg-1) ... Setting up libgtksourceview-4-common (4.8.4-4) ... Setting up libapache-mime4j-java (0.8.2-1) ... Setting up libboost-timer1.74.0:amd64 (1.74.0+ds1-21) ... Setting up ruby-xmlrpc (0.3.2-2) ... Setting up libhawtjni-runtime-java (1.18-1) ... Setting up publicsuffix (20230209.2326-1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... Setting up libsnp-sites1-dev:amd64 (2.5.1-2+b1) ... Setting up python-tables-data (3.7.0-5) ... Setting up exonerate (2.4.0-5) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up sphinx-rtd-theme-common (1.2.0+dfsg-1) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libjs-mootools (1.4.5~debian1-3) ... Setting up bedtools (2.30.0+dfsg-3) ... Setting up tcsh (6.24.07-1) ... update-alternatives: using /bin/tcsh to provide /bin/csh (csh) in auto mode Setting up libsuitesparseconfig5:amd64 (1:5.12.0+dfsg-2) ... Setting up libcc1-0:amd64 (12.2.0-14) ... Setting up libmjpegutils-2.1-0:amd64 (1:2.1.0+debian-7) ... Setting up iso-codes (4.15.0-1) ... Setting up libprotobuf-java (3.21.12-3) ... Setting up dbus-bin (1.14.10-1~deb12u1) ... Setting up info (6.8-6+b1) ... update-alternatives: using /usr/bin/info to provide /usr/bin/infobrowser (infobrowser) in auto mode Setting up libargs4j-java (2.33-2) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up libmstoolkit82 (82-7) ... Setting up fastq-pair (1.0-3) ... Setting up sqlite3 (3.40.1-2) ... Setting up node-thenby (1.3.4+git20200720.0fd165a+ds-3) ... Setting up libbrotli-dev:amd64 (1.0.9-2+b6) ... Setting up gpg (2.2.40-1.1) ... Setting up libgudev-1.0-0:amd64 (237-2) ... Setting up libpolkit-gobject-1-0:amd64 (122-3) ... Setting up node-d3-random (1.1.2-5) ... Setting up libzvbi-common (0.2.41-1) ... Setting up libbpf1:amd64 (1:1.1.0-1) ... Setting up libsecret-common (0.20.5-3) ... Setting up liblsan0:amd64 (12.2.0-14) ... Setting up libsprng2 (2.0a-13) ... Setting up libmbim-glib4:amd64 (1.28.2-1) ... Setting up qtchooser (66-2) ... Setting up yelp-xsl (42.1-2) ... Setting up libmp3lame0:amd64 (3.100-6) ... Setting up libgraphene-1.0-0:amd64 (1.10.8-1) ... Setting up libblas-dev:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up node-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libsz2:amd64 (1.0.6-1+b1) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libsvm3:amd64 (3.24+ds-6) ... Setting up libitm1:amd64 (12.2.0-14) ... Setting up flash (1.2.11-2) ... Setting up libhttp-parser2.9:amd64 (2.9.4-5) ... Setting up libsource-highlight4v5:amd64 (3.1.9-4.2+b3) ... Setting up libf2j-java (0.8.1+dfsg-5) ... Setting up libvorbisenc2:amd64 (1.3.7-1) ... Setting up libsynctex2:amd64 (2022.20220321.62855-5.1+deb12u1) ... Setting up prank (0.0.170427+dfsg-3) ... Setting up libargtable2-0 (13-1.1) ... Setting up libdvdnav4:amd64 (6.1.1-1) ... Setting up libgdbm6:amd64 (1.23-3) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libball1.5-data (1.5.0+git20180813.37fc53c-11) ... Setting up libpopt0:amd64 (1.19+dfsg-1) ... Setting up pbsim (1.0.3+git20180330.e014b1d+dfsg-3) ... Setting up maq (0.7.1-9) ... Setting up libdivsufsort-dev:amd64 (2.0.1-5) ... Setting up laptop-detect (0.16) ... Setting up libinchi1 (1.03+dfsg-4+b2) ... Setting up libqpdf29:amd64 (11.3.0-1+deb12u1) ... Setting up gwama (2.2.2+dfsg-5) ... Setting up lighter (1.1.2-7) ... Setting up gnupg-utils (2.2.40-1.1) ... Setting up libiec61883-0:amd64 (1.2.0-6+b1) ... Setting up libsaaj-java (1.4.0-3) ... Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-8) ... Setting up raxml (8.2.12+dfsg-8+b2) ... Setting up libgflags2.2 (2.2.2-2) ... Setting up gdal-plugins (3.6.2+dfsg-1+b2) ... Setting up libccp4f0:amd64 (8.0.0-2) ... Setting up libgclib3:amd64 (0.12.7+ds-5) ... Setting up libserd-0-0:amd64 (0.30.16-1) ... Setting up libhiredis0.14:amd64 (0.14.1-3) ... Setting up sickle (1.33+git20150314.f3d6ae3-2) ... Setting up libwacom-common (2.6.0-1) ... Setting up clearcut (1.0.9+git20211013.b799afe-1) ... Setting up lastz (1.04.22-2) ... Setting up libaprutil1:amd64 (1.6.3-1) ... Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Setting up comet-ms (2019015+cleaned1-3) ... Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... Setting up libterraces0 (0.0+git20200413.8af2e4c+dfsg-2) ... Setting up libjs-marked (4.2.3+ds+~4.0.7-2) ... Setting up libxkbcommon0:amd64 (1.5.0-1) ... Setting up libkmldom1:amd64 (1.3.0-10) ... Setting up node-busboy (1.6.0+~cs2.6.0-2) ... Setting up libpotrace0:amd64 (1.16-2) ... Setting up libnaga-java (3.0+svn80-5) ... Setting up ncbi-epcr (2.3.12-1-9) ... Setting up ruby-bio (2.0.4-1) ... Setting up libwayland-client0:amd64 (1.21.0-1) ... Setting up libctf0:amd64 (2.40-2) ... Setting up profnet-con (1.0.22-8) ... Setting up libncbi6:amd64 (6.1.20170106+dfsg1-10) ... Setting up pinentry-curses (1.2.1-1) ... Setting up libdom4j-java (2.1.3-2) ... Setting up libjaxb-api-java (2.3.1-1) ... Setting up x11proto-dev (2022.1-1) ... Setting up libavc1394-0:amd64 (0.5.4-5) ... Setting up libpcrecpp0v5:amd64 (2:8.39-15) ... Setting up teckit (2.5.11+ds1-1+b1) ... Setting up libwagon-provider-api-java (3.5.3-1) ... Setting up libcommons-dbcp-java (1.4-8) ... Setting up libjlapack-java (0.8~dfsg-5) ... Setting up libbpp-phyl12:amd64 (2.4.1-8) ... Setting up glib-networking-services (2.74.0-4) ... Setting up libncbi6-dev:amd64 (6.1.20170106+dfsg1-10) ... Setting up gnuplot-data (5.4.4+dfsg1-2) ... Setting up saint (2.5.0+dfsg-4+b2) ... Setting up libzvbi0:amd64 (0.2.41-1) ... Setting up libamd2:amd64 (1:5.12.0+dfsg-2) ... Setting up smalt (0.7.6-12) ... Setting up pscan-chip (1.1-3+b2) ... Setting up libgts-bin (0.7.6+darcs121130-5+b1) ... Setting up libleveldb1d:amd64 (1.23-4) ... Setting up libz3-dev:amd64 (4.8.12-3.1) ... Setting up manpages-dev (6.03-2) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up libjsoncpp-dev:amd64 (1.9.5-4) ... Setting up gromacs-data (2022.5-2) ... Setting up iio-sensor-proxy (3.0-2) ... Setting up libxstream-java (1.4.20-1) ... Setting up fonts-dejavu (2.37-6) ... Setting up libdw1:amd64 (0.188-2.1) ... Setting up libodbcinst2:amd64 (2.3.11-2+deb12u1) ... Setting up tree-puzzle (5.3~rc16+dfsg-9) ... Setting up libhpdf-2.3.0:amd64 (2.3.0+dfsg-1+b1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libzerg0-dev (1.0.7-11) ... Setting up libevent-extra-2.1-7:amd64 (2.1.12-stable-8) ... Setting up tcl8.6 (8.6.13+dfsg-2) ... Setting up liblapack3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libffindex0-dev (0.9.9.9-6) ... Setting up gff2ps (0.98l-6) ... Setting up libudunits2-0 (2.2.28-5) ... Setting up gffread (0.12.7-3) ... Setting up cpp-12 (12.2.0-14) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-12) ... Setting up sigma-align (1.1.3-8) ... Setting up libgsl-dev (2.7.1+dfsg-5) ... Setting up libbpp-seq-omics3:amd64 (2.4.1-9) ... Setting up swig (4.1.0-0.2) ... Setting up libbpp-popgen8:amd64 (2.4.1-8) ... Setting up libjetty9-java (9.4.50-4+deb12u2) ... Setting up vim (2:9.0.1378-2) ... update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/editor (editor) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/ex (ex) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/rview (rview) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/rvim (rvim) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/vi (vi) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/view (view) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/vim (vim) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/vimdiff (vimdiff) in auto mode Setting up node-d3-format (1:1.4.1-7) ... Setting up libopenblas0-pthread:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up libopenni2-0:amd64 (2.2.0.33+dfsg-15+b1) ... Setting up libxcb-xfixes0:amd64 (1.15-1) ... Setting up gpg-agent (2.2.40-1.1) ... Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket → /usr/lib/systemd/user/gpg-agent-browser.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket → /usr/lib/systemd/user/gpg-agent-extra.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket → /usr/lib/systemd/user/gpg-agent-ssh.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent.socket → /usr/lib/systemd/user/gpg-agent.socket. Setting up libatlas3-base:amd64 (3.10.3-13) ... Setting up java-wrappers (0.4) ... Setting up libplacebo208:amd64 (4.208.0-3) ... Setting up libssm2:amd64 (1.4.0-2) ... Setting up libpdfbox-java (1:1.8.16-2) ... Setting up libkmlengine1:amd64 (1.3.0-10) ... Setting up libxau-dev:amd64 (1:1.0.9-1) ... Setting up clonalorigin (1.0-6+b2) ... Setting up libcolamd2:amd64 (1:5.12.0+dfsg-2) ... Setting up libgoogle-glog0v6 (0.6.0-2) ... Setting up libjxr-tools (1.2~git20170615.f752187-5) ... Setting up libcaca0:amd64 (0.99.beta20-3) ... Setting up sumatra (1.0.36+ds-2) ... Setting up libunwind-dev:amd64 (1.6.2-3) ... Setting up libavif15:amd64 (0.11.1-1) ... Setting up libjersey1-client-java (1.19.3-8) ... Setting up libbpp-raa4:amd64 (2.4.1-7) ... Setting up libmbedx509-1:amd64 (2.28.3-1) ... Setting up qt5-qmake:amd64 (5.15.8+dfsg-11) ... Setting up libstringtemplate4-java (4.0.8-2.1) ... Setting up libplexus-languages-java (1.1.1-2) ... Setting up libvbz-hdf-plugin-dev:amd64 (1.0.2-2) ... Setting up libmbedtls14:amd64 (2.28.3-1) ... Setting up libjgrapht0.8-java (0.8.3-6) ... Setting up libjboss-vfs-java (3.2.15.Final-2) ... Setting up kraken (1.1.1-4) ... Setting up libxcb-xinput0:amd64 (1.15-1) ... Setting up libwoff1:amd64 (1.0.2-2) ... Setting up proftmb (1.1.12-11) ... Setting up libcassie1v5 (1.0.9-3+b2) ... Setting up jarwrapper (0.78) ... Setting up libfreecontact0v5:amd64 (1.0.21-13) ... Setting up libice-dev:amd64 (2:1.0.10-1) ... Setting up libccp4-dev:amd64 (8.0.0-2) ... Setting up dictionaries-common (1.29.5) ... Setting up libpng-tools (1.6.39-2) ... Setting up alsa-ucm-conf (1.2.8-1) ... Setting up libssw-dev:amd64 (1.1-13) ... Setting up transrate-tools (1.0.0-5) ... Setting up libhsqldb-java (2.7.1-1+deb12u1) ... Setting up libarchive13:amd64 (3.6.2-1) ... Setting up libxcb-render0:amd64 (1.15-1) ... Setting up libwacom9:amd64 (2.6.0-1) ... Setting up libcglib-java (3.3.0-1) ... Setting up physamp (1.1.0-4) ... Setting up libwpe-1.0-1:amd64 (1.14.0-1) ... Setting up node-d3-time-format (2.1.3-7) ... Setting up libjs-scriptaculous (1.9.0-3) ... Setting up wise (2.4.1-23) ... Setting up libjdom1-java (1.1.3-3) ... Setting up libstax-ex-java (1.7.8-3) ... Setting up glam2 (1064-9) ... Setting up libnewuoa-dev (0.1.2-1) ... Setting up kmerresistance (2.2.0-4) ... Setting up libxcb-glx0:amd64 (1.15-1) ... Setting up libxerial-sqlite-jdbc-java (3.40.1.0+dfsg-1+deb12u1) ... Setting up libwebpdemux2:amd64 (1.2.4-0.2+deb12u1) ... Setting up libmanette-0.2-0:amd64 (0.2.6-3+b1) ... Setting up terraphast (0.0+git20200413.8af2e4c+dfsg-2) ... Setting up libmaven-parent-java (35-1) ... Setting up libedit2:amd64 (3.1-20221030-2) ... Setting up libjs-bootstrap-tour (0.12.0+dfsg-5) ... Setting up gpgsm (2.2.40-1.1) ... Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Setting up libcommons-parent-java (56-1) ... Setting up node-d3-chord (1.0.6-7) ... Setting up mptp (0.2.4-3+b2) ... Setting up libxcb-keysyms1:amd64 (0.4.0-1+b2) ... Setting up libaec-dev:amd64 (1.0.6-1+b1) ... Setting up libarpack2:amd64 (3.8.0-3) ... Setting up libxcb-shape0:amd64 (1.15-1) ... Setting up profphd-utils (1.0.10-7) ... Setting up libdjvulibre21:amd64 (3.5.28-2+b1) ... Setting up libavahi-common3:amd64 (0.8-10) ... Setting up cassiopee (1.0.9-3+b2) ... Setting up profnet-md (1.0.22-8) ... Setting up libncbi-vdb3:amd64 (3.0.2+dfsg-2) ... Setting up swi-prolog-doc (9.0.4+dfsg-2) ... Setting up ssw-align (1.1-13) ... Setting up libpbdata-dev:amd64 (5.3.5+dfsg-4+b2) ... Setting up libsuperlu5:amd64 (5.3.0+dfsg1-2+b1) ... Setting up libcereal-dev (1.3.2+dfsg-4) ... Setting up libcommons-logging-java (1.2-3) ... Setting up libevent-openssl-2.1-7:amd64 (2.1.12-stable-8) ... Setting up ncl-tools (2.1.21+git20210811.b1213a7-4) ... Setting up libxcb-render-util0:amd64 (0.3.9-1+b1) ... Setting up libjs-backbone (1.4.1~dfsg+~1.4.15-3) ... Setting up libstringtemplate-java (3.2.1-3) ... Setting up fastahack (1.0.0+dfsg-10) ... Setting up libsisu-inject-java (0.3.4-2) ... Setting up libobjc4:amd64 (12.2.0-14) ... Setting up skesa (2.4.0-6+b1) ... Setting up libnss3:amd64 (2:3.87.1-1) ... Setting up libxcb-shm0:amd64 (1.15-1) ... Setting up libciftools-java (4.0.5-1) ... Setting up libxcb-icccm4:amd64 (0.4.1-1.1) ... Setting up libsundials-sunmatrix4:amd64 (6.4.1+dfsg1-3) ... Setting up dbus-daemon (1.14.10-1~deb12u1) ... Setting up libslow5-dev:amd64 (0.7.0+dfsg-2+b1) ... Setting up libmbim-proxy (1.28.2-1) ... Setting up clustalo (1.2.4-7) ... Setting up tm-align (20190822+dfsg-2) ... Setting up libxom-java (1.3.8-1) ... Setting up libpwiz3 (3.0.18342-4+b1) ... Setting up librostlab3-dev (1.0.20-12) ... Setting up libjaxws-api-java (2.3.0-1.1) ... Setting up biosquid (1.9g+cvs20050121-12) ... Setting up sambamba (1.0+dfsg-1) ... Setting up libqrupdate1:amd64 (1.1.2-4) ... Setting up node-d3-shape (1.3.7-5) ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.6.3-1) ... Setting up octave-doc (7.3.0-2) ... Setting up libwxbase3.2-1:amd64 (3.2.2+dfsg-2) ... Setting up libgclib-dev:amd64 (0.12.7+ds-5) ... Setting up libgpgme11:amd64 (1.18.0-3+b1) ... Setting up libcommons-lang-java (2.6-10) ... Setting up libmopac7-1gf (1.15-6+b3) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up libsundials-ida6:amd64 (6.4.1+dfsg1-3) ... Setting up libjackson2-databind-java (2.14.0-1) ... Setting up liblept5:amd64 (1.82.0-3+b3) ... Setting up libspandsp2:amd64 (0.0.6+dfsg-2+b1) ... Setting up libplexus-cipher-java (2.0-1) ... Setting up libxcb-util1:amd64 (0.4.0-1+b1) ... Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... Setting up pkgconf:amd64 (1.8.1-1) ... Setting up libjson-glib-1.0-0:amd64 (1.6.6-1) ... Setting up libinput-bin (1.22.1-1) ... Setting up libxcb-xkb1:amd64 (1.15-1) ... Setting up libxcb-image0:amd64 (0.4.0-2) ... Setting up libtbbbind-2-5:amd64 (2021.8.0-2) ... Setting up libxmlunit-java (1.6-2) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.2+b1) ... Setting up profnet-isis (1.0.22-8) ... Setting up fuse3 (3.14.0-4) ... Setting up librist4:amd64 (0.2.7+dfsg-1) ... Setting up libxcb-present0:amd64 (1.15-1) ... Setting up libcifpp5:amd64 (5.0.7.1-1) ... Setting up libv4l-0:amd64 (1.22.1-5+b2) ... Setting up libcastor-core-java (1.3.2-7) ... Setting up wigeon (20101212+dfsg1-5) ... Setting up igor (1.4.0+dfsg-4) ... Setting up libbpp-core-dev:amd64 (2.4.1-9) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up coinor-libcoinutils3v5:amd64 (2.11.4+repack1-2) ... Setting up cdbfasta (1.00+git20181005.014498c+dfsg-4+b1) ... Setting up dirmngr (2.2.40-1.1) ... Created symlink /etc/systemd/user/sockets.target.wants/dirmngr.socket → /usr/lib/systemd/user/dirmngr.socket. Setting up libthai0:amd64 (0.1.29-1) ... Setting up nast-ier (20101212+dfsg1-5) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libcamd2:amd64 (1:5.12.0+dfsg-2) ... Setting up libsisu-plexus-java (0.3.4-3) ... Setting up libvorbisfile3:amd64 (1.3.7-1) ... Setting up nim-hts-dev (0.3.19+ds-1) ... Setting up libxdmcp-dev:amd64 (1:1.1.2-3) ... Setting up node-d3-drag (1.2.5-4) ... Setting up fsm-lite (1.0-8) ... Setting up node-iconv-lite (0.6.3-3) ... Setting up libwpebackend-fdo-1.0-1:amd64 (1.14.2-1) ... Setting up phylonium (1.6-1) ... Setting up libsecret-1-0:amd64 (0.20.5-3) ... Setting up libgprofng0:amd64 (2.40-2) ... Setting up libxcb-xinerama0:amd64 (1.15-1) ... Setting up libjavascriptcoregtk-4.1-0:amd64 (2.42.2-1~deb12u1) ... Setting up profphd-net (1.0.22-8) ... Setting up libtmglib3:amd64 (3.11.0-2) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libptexenc1:amd64 (2022.20220321.62855-5.1+deb12u1) ... Setting up pandoc (2.17.1.1-2~deb12u1) ... Setting up libfreetype6:amd64 (2.12.1+dfsg-5) ... Setting up libdsdp-5.8gf (5.8-10) ... Setting up covtobed (1.3.5+dfsg-1+b1) ... Setting up mcl (1:22-282+ds-2) ... Setting up profnet-bval (1.0.22-8) ... Setting up profnet-chop (1.0.22-8) ... Setting up libglpk40:amd64 (5.0-1) ... Setting up lib32gcc-s1 (12.2.0-14) ... Setting up lib32stdc++6 (12.2.0-14) ... Setting up libspa-0.2-modules:amd64 (0.3.65-3+deb12u1) ... Setting up ssl-cert (1.1.2) ... Setting up libxcb-sync1:amd64 (1.15-1) ... Setting up python3.11-doc (3.11.2-6) ... Setting up librocksdb7.8 (7.8.3-2) ... Setting up perm (0.4.0-8+b1) ... Setting up libxalan2-java (2.7.2-4) ... Setting up libcastor-xml-java (1.3.2-7) ... Setting up profnet-norsnet (1.0.22-8) ... Setting up libsbml5:amd64 (5.19.7+dfsg-2) ... Setting up libsvmloc0:amd64 (1.0+dfsg-5+b1) ... Setting up libjs-jquery-metadata (12-4) ... Setting up libgdcm3.0:amd64 (3.0.21-1) ... Setting up gnustep-base-common (1.28.1+really1.28.0-5) ... Setting up bppsuite (2.4.1-6) ... Setting up dbus (1.14.10-1~deb12u1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libkmer-dev (0~20150903+r2013-8+b3) ... Setting up libgcc-12-dev:amd64 (12.2.0-14) ... Setting up libpipewire-0.3-0:amd64 (0.3.65-3+deb12u1) ... Setting up node-d3-scale (2.2.2-6) ... Setting up shared-mime-info (2.2-1) ... Setting up python-odf-doc (1.4.2-2) ... Setting up racon (1.5.0-3) ... Setting up libxkbcommon-x11-0:amd64 (1.5.0-1) ... Setting up libdc1394-25:amd64 (2.2.6-4) ... Setting up libevent-dev (2.1.12-stable-8) ... Setting up libncbi-wvdb3:amd64 (3.0.2+dfsg-2) ... Setting up liblapack-dev:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... Setting up libstreambuffer-java (1.5.4-1.1) ... Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-2+deb12u1) ... Setting up libj2ssh-java (0.2.9-5) ... Setting up libgflags-dev (2.2.2-2) ... Setting up readseq (1-14) ... Setting up libcommons-collections4-java (4.2-1) ... Setting up libedlib-dev:amd64 (1.2.7-4+b1) ... Setting up mash (2.3+dfsg-3+b1) ... Setting up pkg-config:amd64 (1.8.1-1) ... Setting up libgdbm-compat4:amd64 (1.23-3) ... Setting up libmpeg2encpp-2.1-0:amd64 (1:2.1.0+debian-7) ... Setting up libsmithwaterman-dev:amd64 (0.0+git20160702.2610e25-12+b1) ... Setting up ucf (3.0043+nmu1) ... Setting up libjswingreader-java (0.3-3) ... Setting up gir1.2-glib-2.0:amd64 (1.74.0-3) ... Setting up libcommons-discovery-java (0.5-4) ... Setting up libgatbcore-dev:amd64 (1.4.2+dfsg-11) ... Setting up aspell (0.60.8-4+b1) ... Setting up libminpack1:amd64 (19961126+dfsg1-5) ... Setting up libqt5core5a:amd64 (5.15.8+dfsg-11) ... Setting up libbabeltrace1:amd64 (1.5.11-1+b2) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up node-d3-force (1.2.1-5) ... Setting up coinor-libosi1v5:amd64 (0.108.6+repack1-2) ... Setting up libcommons-lang3-java (3.12.0-2) ... Setting up pinfish (0.1.0+ds-3) ... Setting up berkeley-express (1.5.3+dfsg-3+b1) ... Setting up node-d3-contour (1.3.2-8) ... Setting up libx265-199:amd64 (3.5-2+b1) ... Setting up libssm-dev:amd64 (1.4.0-2) ... Setting up gpg-wks-server (2.2.40-1.1) ... Setting up libonnx1:amd64 (1.12.0-2+b4) ... Setting up libsndio7.0:amd64 (1.9.0-0.3+b2) ... Setting up libxcb-dri2-0:amd64 (1.15-1) ... Setting up libllvm14:amd64 (1:14.0.6-12) ... Setting up libobjc-12-dev:amd64 (12.2.0-14) ... Setting up sumaclust (1.0.36+ds-2) ... Setting up librngom-java (2.3.0.1-10.1) ... Setting up libjack-jackd2-0:amd64 (1.9.21~dfsg-3) ... Setting up libgvpr2:amd64 (2.42.2-7+b3) ... Setting up node-undici (5.15.0+dfsg1+~cs20.10.9.3-1+deb12u3) ... Setting up emmax (0~beta.20100307-3) ... Setting up libdrm2:amd64 (2.4.114-1+b1) ... Setting up libjni-inchi-jni (0.8+dfsg-7) ... Setting up dwz (0.15-1) ... Setting up patman (1.2.2+dfsg-8+b1) ... Setting up libjansi-native-java (1.8-1) ... Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... Setting up libflite1:amd64 (2.2-5) ... Setting up ncbi-tools-bin (6.1.20170106+dfsg1-10) ... Setting up libnl-3-dev:amd64 (3.7.0-0.2+b1) ... Setting up libva-drm2:amd64 (2.17.0-1) ... Setting up libopenblas0:amd64 (0.3.21+ds-4) ... Setting up node-d3-brush (1.1.5-4) ... Setting up snp-sites (2.5.1-2+b1) ... Setting up groff-base (1.22.4-10) ... Setting up libklu1:amd64 (1:5.12.0+dfsg-2) ... Setting up rapmap (0.15.0+dfsg-3+b2) ... Setting up libneon27:amd64 (0.32.5-1) ... Setting up libqt5dbus5:amd64 (5.15.8+dfsg-11) ... Setting up libsord-0-0:amd64 (0.16.14+git221008-1) ... Setting up liblapacke:amd64 (3.11.0-2) ... Setting up libccolamd2:amd64 (1:5.12.0+dfsg-2) ... Setting up ngmlr (0.2.7+git20210816.a2a31fb+dfsg-2+b1) ... Setting up libwayland-cursor0:amd64 (1.21.0-1) ... Setting up libxcb-randr0:amd64 (1.15-1) ... Setting up libbpp-phyl-omics3:amd64 (2.4.1-4) ... Setting up cpp (4:12.2.0-3) ... Setting up xml-core (0.18+nmu1) ... Setting up libsratom-0-0:amd64 (0.6.14-1) ... Setting up tcl (8.6.13) ... Setting up source-highlight (3.1.9-4.2+b3) ... Setting up libllvm15:amd64 (1:15.0.6-4+b1) ... Setting up libnl-genl-3-200:amd64 (3.7.0-0.2+b1) ... Setting up libxslt1.1:amd64 (1.1.35-1) ... Setting up biosyntax-vim (1.0.0b-4) ... Setting up hunspell-en-us (1:2020.12.07-2) ... Setting up libpam-systemd:amd64 (252.22-1~deb12u1) ... Setting up hmmer (3.3.2+dfsg-1) ... Setting up libdecor-0-0:amd64 (0.1.1-2) ... Setting up swi-prolog-nox (9.0.4+dfsg-2) ... Setting up libcommons-beanutils-java (1.9.4-1) ... Setting up libjansi1-java (1.18-3) ... Setting up libcurl4:amd64 (7.88.1-10+deb12u5) ... Setting up libpolkit-agent-1-0:amd64 (122-3) ... Setting up libplexus-sec-dispatcher-java (2.0-3) ... Setting up libx11-6:amd64 (2:1.8.4-2+deb12u2) ... Setting up libharfbuzz0b:amd64 (6.0.0+dfsg-3) ... Setting up plink2 (2.00~a3.5-220809+dfsg-1+b2) ... Setting up theseus (3.3.0-14) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.10+dfsg-1+b1) ... Setting up libavahi-glib1:amd64 (0.8-10) ... Setting up grabix (0.1.7-4) ... Setting up librostlab-blast0-dev (1.0.1-13) ... Setting up libmplex2-2.1-0:amd64 (1:2.1.0+debian-7) ... Setting up libsnappy-java (1.1.8.3-1) ... Setting up libgoogle-glog-dev (0.6.0-2) ... Setting up curl (7.88.1-10+deb12u5) ... Setting up libpwiz-tools (3.0.18342-4+b1) ... Setting up usb-modeswitch (2.6.1-3+b1) ... Setting up libfontconfig1:amd64 (2.14.1-4) ... Setting up cif-tools (1.0.7-1) ... Setting up libsndfile1:amd64 (1.2.0-1) ... Setting up andi (0.14-2) ... Setting up libxkbfile1:amd64 (1:1.1.0-1) ... Setting up node-d3-dsv (1.1.1-9) ... Setting up numba-doc (0.56.4+dfsg-2) ... Setting up libncbi-wvdb-dev:amd64 (3.0.2+dfsg-2) ... Setting up lynx (2.9.0dev.12-1) ... update-alternatives: using /usr/bin/lynx to provide /usr/bin/www-browser (www-browser) in auto mode Setting up libxsom-java (2.3.0.1-10.1) ... Setting up libmbim-utils (1.28.2-1) ... Setting up ca-certificates-java (20230710~deb12u1) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-configuration-java (1.10-6) ... Setting up libqt5sensors5:amd64 (5.15.8-2) ... Setting up plasmidseeker:amd64 (1.3+dfsg-3) ... Setting up libcommons-codec-java (1.15-1) ... Setting up libbluray2:amd64 (1:1.3.4-1) ... Setting up llvm-14-linker-tools (1:14.0.6-12) ... Setting up libqt5test5:amd64 (5.15.8+dfsg-11) ... Setting up libavahi-core7:amd64 (0.8-10) ... Setting up libjline2-java (2.14.6-5) ... Setting up plink1.9 (1.90~b6.26-220402-1) ... Setting up libxcomposite1:amd64 (1:0.4.5-1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up liblilv-0-0:amd64 (0.24.14-1) ... Setting up libreflections-java (0.10.2+dfsg-1) ... Setting up libqt5concurrent5:amd64 (5.15.8+dfsg-11) ... Setting up sysstat (12.6.1-1) ... Creating config file /etc/default/sysstat with new version update-alternatives: using /usr/bin/sar.sysstat to provide /usr/bin/sar (sar) in auto mode Created symlink /etc/systemd/system/sysstat.service.wants/sysstat-collect.timer → /lib/systemd/system/sysstat-collect.timer. Created symlink /etc/systemd/system/sysstat.service.wants/sysstat-summary.timer → /lib/systemd/system/sysstat-summary.timer. Created symlink /etc/systemd/system/multi-user.target.wants/sysstat.service → /lib/systemd/system/sysstat.service. Setting up libopenmpt0:amd64 (0.6.9-1) ... Setting up python-pyopencl-doc (2022.3.1-2.1) ... Setting up libinstpatch-1.0-2:amd64 (1.1.6-1) ... Setting up libavahi-client3:amd64 (0.8-10) ... Setting up libcholmod3:amd64 (1:5.12.0+dfsg-2) ... Setting up libgit2-1.5:amd64 (1.5.1+ds-1) ... Setting up libperl5.36:amd64 (5.36.0-7+deb12u1) ... Setting up libxmuu1:amd64 (2:1.1.3-3) ... Setting up python3-doc (3.11.2-1) ... Setting up libgstreamer1.0-0:amd64 (1.22.0-2) ... Setcap worked! gst-ptp-helper is not suid! Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1) ... Setting up libaa1:amd64 (1.4p5-50) ... Setting up apache2-utils (2.4.57-2) ... Setting up binutils-x86-64-linux-gnu (2.40-2) ... Setting up libdrm-amdgpu1:amd64 (2.4.114-1+b1) ... Setting up maffilter (1.3.1+dfsg-4) ... Setting up libssh-gcrypt-4:amd64 (0.10.6-0+deb12u1) ... Setting up libopenblas-pthread-dev:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode Setting up libsaaj-ri-java (1.4.1-1.1) ... Setting up libncbi-ngs3:amd64 (3.0.3+dfsg-6~deb12u1) ... Setting up libtirpc3:amd64 (1.3.3+ds-1) ... Setting up libxcb-dri3-0:amd64 (1.15-1) ... Setting up libnetlib-java (0.9.3-7) ... Setting up libinput10:amd64 (1.22.1-1) ... Setting up phast (1.6+dfsg-3+b1) ... Setting up libpaper1:amd64 (1.1.29) ... Creating config file /etc/papersize with new version Setting up gtk-update-icon-cache (3.24.38-2~deb12u1) ... Setting up libspqr2:amd64 (1:5.12.0+dfsg-2) ... Setting up libportaudio2:amd64 (19.6.0-1.2) ... Setting up libx11-xcb1:amd64 (2:1.8.4-2+deb12u2) ... Setting up velocity (1.7-6) ... Setting up libibverbs1:amd64 (44.0-2) ... Setting up fontconfig (2.14.1-4) ... Regenerating fonts cache... done. Setting up libngs-jni:amd64 (3.0.3+dfsg-6~deb12u1) ... Setting up norsnet (1.0.17-7) ... Setting up libdrm-nouveau2:amd64 (2.4.114-1+b1) ... Setting up libbpp-seq-dev:amd64 (2.4.1-9) ... Setting up gir1.2-freedesktop:amd64 (1.74.0-3) ... Setting up libharfbuzz-icu0:amd64 (6.0.0+dfsg-3) ... Setting up libllvmspirvlib15:amd64 (15.0.0-2) ... Setting up libxdamage1:amd64 (1:1.1.6-1) ... Setting up libxcb1-dev:amd64 (1.15-1) ... Setting up libzmq5:amd64 (4.3.4-6) ... Setting up libxpm4:amd64 (1:3.5.12-1.1+deb12u1) ... Setting up libclang-common-15-dev (1:15.0.6-4+b1) ... Setting up gpg-wks-client (2.2.40-1.1) ... Setting up garlic (1.6-3+b1) ... Setting up libarmadillo11 (1:11.4.2+dfsg-1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libcommons-compress-java (1.22-1) ... Setting up gir1.2-gdkpixbuf-2.0:amd64 (2.42.10+dfsg-1+b1) ... Setting up libdebuginfod-common (0.188-2.1) ... Setting up libgbm1:amd64 (22.3.6-1+deb12u1) ... Setting up ibverbs-providers:amd64 (44.0-2) ... Setting up libspoa-dev:amd64 (4.0.8-1) ... Setting up libogdi4.1 (4.1.0+ds-6) ... Setting up libpulse0:amd64 (16.1+dfsg1-2+b1) ... Setting up libenchant-2-2:amd64 (2.3.3-2) ... Setting up python3-pip-whl (23.0.1+dfsg-1) ... Setting up libsombok3:amd64 (2.4.0-2+b1) ... Setting up gir1.2-atk-1.0:amd64 (2.46.0-5) ... Setting up libzbar0:amd64 (0.23.92-7+deb12u1) ... Setting up libsm-dev:amd64 (2:1.2.3-1) ... Setting up libgloo0 (0.0~git20220518.5b14351-3) ... Setting up libcommons-io-java (2.11.0-2) ... Setting up libdrm-radeon1:amd64 (2.4.114-1+b1) ... Setting up libmaus2-2:amd64 (2.0.813+ds-1) ... Setting up aevol (5.0+ds-3+b1) ... Setting up iproute2 (6.1.0-3) ... Setting up libcommons-digester-java (1.8.1-5) ... Setting up openssh-client (1:9.2p1-2+deb12u2) ... Setting up python-mako-doc (1.2.4+ds-1) ... Setting up tortoize (2.0.11-1) ... Setting up node-d3-zoom (1.8.3-4) ... Setting up libdistlib-java (1.0-4) ... Setting up libqt5positioning5:amd64 (5.15.8+dfsg-3+deb12u1) ... Setting up libpango-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libsrtp2-1:amd64 (2.5.0-3) ... Setting up libdrm-intel1:amd64 (2.4.114-1+b1) ... Setting up libgl1-mesa-dri:amd64 (22.3.6-1+deb12u1) ... Setting up libheif1:amd64 (1.15.1-1) ... Setting up xsltproc (1.1.35-1) ... Setting up libpwiz-dev (3.0.18342-4+b1) ... Setting up libbpp-popgen-dev:amd64 (2.4.1-8) ... Setting up aspell-en (2020.12.07-0-1) ... Setting up libpq5:amd64 (15.5-0+deb12u1) ... Setting up libx11-dev:amd64 (2:1.8.4-2+deb12u2) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up nss-plugin-pem:amd64 (1.0.8+1-1) ... Setting up enchant-2 (2.3.3-2) ... Setting up libgstreamer-plugins-base1.0-0:amd64 (1.22.0-3+deb12u1) ... Setting up node-d3-fetch (1.2.0-5) ... Setting up libqmi-glib5:amd64 (1.32.2-1) ... Setting up libcurl3-gnutls:amd64 (7.88.1-10+deb12u5) ... Setting up libxmlgraphics-commons-java (2.8-2) ... Setting up rdp-classifier-doc (2.10.2-6) ... Setting up libgfortran-12-dev:amd64 (12.2.0-14) ... Setting up libtbb12:amd64 (2021.8.0-2) ... Setting up rubygems-integration (1.18) ... Setting up libvamsas-client-java (0.2+dfsg-2) ... Setting up libqt5serialport5:amd64 (5.15.8-2) ... Setting up libbigwig0:amd64 (0.4.7+dfsg-3) ... Setting up libopenal1:amd64 (1:1.19.1-2) ... Setting up gemma (0.98.5+dfsg-2) ... Setting up binutils (2.40-2) ... Setting up hyphy-pt (2.5.47+dfsg-1) ... Setting up libpaper-utils (1.1.29) ... Setting up libcfitsio10:amd64 (4.2.0-3) ... Setting up libaprutil1-ldap:amd64 (1.6.3-1) ... Setting up node-d3 (5.16.0-10) ... Setting up dssp (4.2.2-2) ... Setting up libcurl4-gnutls-dev:amd64 (7.88.1-10+deb12u5) ... Setting up xfonts-utils (1:7.7+6) ... Setting up mupdf-tools (1.21.1+ds2-1+b4) ... Setting up libqt6core6:amd64 (6.4.2+dfsg-10) ... Setting up man-db (2.11.2-2) ... Building database of manual pages ... Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up sortmerna (4.3.6-2) ... Setting up gir1.2-harfbuzz-0.0:amd64 (6.0.0+dfsg-3) ... Setting up libcairo2:amd64 (1.16.0-7) ... Setting up biosyntax-less (1.0.0b-4) ... Setting up libqt5network5:amd64 (5.15.8+dfsg-11) ... Setting up biobambam2 (2.0.185+ds-1) ... Setting up ipig (0.0.r5-4) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libsbml5-dev (5.19.7+dfsg-2) ... Setting up libxnvctrl0:amd64 (525.85.05-3~deb12u1) ... Setting up libmpj-java (0.44+dfsg-4) ... Setting up bolt-lmm (2.4.0+dfsg-1) ... Setting up libqt5sql5:amd64 (5.15.8+dfsg-11) ... Setting up wpasupplicant (2:2.10-12) ... Created symlink /etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service → /lib/systemd/system/wpa_supplicant.service. Created symlink /etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libnl-route-3-dev:amd64 (3.7.0-0.2+b1) ... Setting up dbus-user-session (1.14.10-1~deb12u1) ... Setting up libqt5websockets5:amd64 (5.15.8-2) ... Setting up libmaven-resolver-java (1.6.3-1) ... Setting up libmagickcore-6.q16-6:amd64 (8:6.9.11.60+dfsg-1.6) ... Setting up libopenblas-dev:amd64 (0.3.21+ds-4) ... Setting up chemical-mime-data (0.1.94-7.2) ... Setting up libqt5texttospeech5:amd64 (5.15.8-2) ... Setting up perl (5.36.0-7+deb12u1) ... Setting up libpackage-stash-xs-perl:amd64 (0.30-1+b1) ... Setting up libqt5xml5:amd64 (5.15.8+dfsg-11) ... Setting up libstream-buffered-perl (0.03-3) ... Setting up libegl-mesa0:amd64 (22.3.6-1+deb12u1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libtirpc-dev:amd64 (1.3.3+ds-1) ... Setting up libalgorithm-c3-perl (0.11-2) ... Setting up libset-object-perl (1.42-1+b2) ... Setting up libmodule-signature-perl (0.88-2) ... Setting up libumfpack5:amd64 (1:5.12.0+dfsg-2) ... Setting up liblog-log4perl-perl (1.57-1) ... Setting up libtext-reform-perl (1.20-5) ... Setting up libass9:amd64 (1:0.17.1-1) ... Setting up libclass-tiny-perl (1.008-2) ... Setting up libqt6xml6:amd64 (6.4.2+dfsg-10) ... Setting up llvm-14-runtime (1:14.0.6-12) ... Setting up adwaita-icon-theme (43-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libdata-dump-perl (1.25-1) ... Setting up libstring-crc32-perl (2.100-2) ... Setting up libqt6sql6:amd64 (6.4.2+dfsg-10) ... Setting up gcc-12 (12.2.0-14) ... Setting up libfile-find-rule-perl (0.34-3) ... Setting up libgnustep-base1.28 (1.28.1+really1.28.0-5) ... Setting up libref-util-perl (0.204-2) ... Setting up libxfixes3:amd64 (1:6.0.0-2) ... Setting up libmodule-find-perl (0.16-2) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libqt5qml5:amd64 (5.15.8+dfsg-3) ... Setting up tcllib (1.21+dfsg-1) ... Setting up libcommons-httpclient-java (3.1-16) ... Setting up libxml-xpathengine-perl (0.14-2) ... Setting up libbpp-phyl-dev:amd64 (2.4.1-8) ... Setting up libperlio-utf8-strict-perl (0.010-1) ... Setting up libqt6sql6-sqlite:amd64 (6.4.2+dfsg-10) ... Setting up libnotify4:amd64 (0.8.1-1) ... Setting up coinor-libclp1:amd64 (1.17.6-3) ... Setting up libxml-writer-perl (0.900-2) ... Setting up libraqm0:amd64 (0.7.0-4.1) ... Setting up libclass-autoloadcan-perl (0.03-4) ... Setting up libenv-path-perl (0.19-4) ... Setting up libnet-libidn-perl (0.12.ds-4+b1) ... Setting up libxinerama1:amd64 (2:1.1.4-3) ... Setting up libdata-dumper-simple-perl (0.11-7) ... Setting up mlv-smile (1.47-8) ... Setting up libgd3:amd64 (2.3.3-9) ... Setting up libemail-date-format-perl (1.008-1) ... Setting up libencode-perl:amd64 (3.19-1+b1) ... Setting up libcrypt-rc4-perl (2.02-5) ... Setting up libxv1:amd64 (2:1.0.11-1.1) ... Setting up libvariable-magic-perl (0.63-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up libaxis-java (1.4-28+deb12u1) ... Setting up libxrandr2:amd64 (2:1.5.2-2+b1) ... Setting up libtext-template-perl (1.61-1) ... Setting up libpod-parser-perl (1.65-1) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Setting up libfile-grep-perl (0.02-3) ... Setting up libclang-cpp14 (1:14.0.6-12) ... Setting up libgraphicsmagick-q16-3 (1.4+really1.3.40-4) ... Setting up libmath-vecstat-perl (0.08-3) ... Setting up libqt5webchannel5:amd64 (5.15.8-2) ... Setting up liblist-moreutils-xs-perl (0.430-3+b1) ... Setting up libmath-derivative-perl (1.01-3) ... Setting up netpbm (2:11.01.00-2) ... Setting up libxt6:amd64 (1:1.2.1-1.1) ... Setting up libpoppler126:amd64 (22.12.0-2+b1) ... Setting up libparams-util-perl (1.102-2+b1) ... Setting up libdpkg-perl (1.21.22) ... Setting up parallel (20221122+ds-2) ... Setting up libspiffy-perl (0.46-1) ... Setting up autoconf (2.71-3) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libhdf4-0-alt (4.2.15-5) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libmath-round-perl (0.07-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libxext-dev:amd64 (2:1.3.4-1+b1) ... Setting up libset-scalar-perl (1.29-3) ... Setting up norsp (1.0.6-7) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libexporter-lite-perl (0.09-2) ... Setting up libcups2:amd64 (2.4.2-3+deb12u5) ... Setting up libclang-cpp15 (1:15.0.6-4+b1) ... Setting up libsub-name-perl:amd64 (0.26-2+b1) ... Setting up libtype-tiny-xs-perl:amd64 (0.025-1) ... Setting up libsis-base-java (18.09~pre1+git20180928.45fbd31+dfsg-3) ... Setting up libgetopt-euclid-perl (0.4.5-4) ... Setting up libhdf5-103-1:amd64 (1.10.8+repack1-1) ... Setting up liburi-escape-xs-perl (0.14-2+b1) ... Setting up libmath-cephes-perl (0.5305-6+b1) ... Setting up libbpp-seq-omics-dev:amd64 (2.4.1-9) ... Setting up libparse-recdescent-perl (1.967015+dfsg-4) ... Setting up avahi-daemon (0.8-10) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of force-reload. Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. Setting up libhttpclient-java (4.5.14-1) ... Setting up qtspeech5-speechd-plugin:amd64 (5.15.8-2) ... Setting up libfile-chdir-perl (0.1008-1.1) ... Setting up libcurl3-nss:amd64 (7.88.1-10+deb12u5) ... Setting up libgetopt-complete-perl (0.26-4) ... Setting up libtesseract5:amd64 (5.3.0-2) ... Setting up xauth (1:1.1.2-1) ... Setting up libgdk-pixbuf2.0-bin (2.42.10+dfsg-1+b1) ... Setting up libvdpau1:amd64 (1.5-2) ... Setting up libmime-charset-perl (1.013.1-2) ... Setting up libcookie-baker-xs-perl (0.12-1+b1) ... Setting up libcontext-preserve-perl (0.03-3) ... Setting up lmodern (2.005-1) ... Setting up libstatistics-distributions-perl (1.02-1.1) ... Setting up libpath-tiny-perl (0.144-1) ... Setting up libarchive-cpio-perl (0.10-3) ... Setting up libtheora0:amd64 (1.1.1+dfsg.1-16.1+b1) ... Setting up libjson-perl (4.10000-1) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libhdf5-cpp-103-1:amd64 (1.10.8+repack1-1) ... Setting up libegl1:amd64 (1.6.0-1) ... Setting up mummer (3.23+dfsg-8) ... Setting up libtext-format-perl (0.62-1) ... Setting up libswiss-perl (1.80-1) ... Setting up gnupg (2.2.40-1.1) ... Setting up libalgorithm-svm-perl (0.13-3+b1) ... Setting up libcarp-always-perl (0.16-1) ... Setting up libharfbuzz-subset0:amd64 (6.0.0+dfsg-3) ... Setting up libfcgi-perl (0.82+ds-2) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libmagickwand-6.q16-6:amd64 (8:6.9.11.60+dfsg-1.6) ... Setting up libcarp-clan-perl (6.08-2) ... Setting up libdevel-globaldestruction-perl (0.14-4) ... Setting up libwww-form-urlencoded-perl (0.26-2) ... Setting up emboss-lib (6.6.0+dfsg-12) ... Setting up libcairo-perl (1.109-3+b1) ... Setting up libgraphicsmagick++-q16-12 (1.4+really1.3.40-4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up liblightcouch-java (0.2.0-1) ... Setting up libwagon-http-java (3.5.3-1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up dextractor (1.0-6) ... Setting up libsis-jhdf5-jni (19.04.1+dfsg-3) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libcairo-gobject2:amd64 (1.16.0-7) ... Setting up libmaven-shared-utils-java (3.3.4-1) ... Setting up libtext-autoformat-perl (1.750000-2) ... Setting up libgraphics-colornames-perl (3.5.0-3) ... Setting up libqt6core5compat6:amd64 (6.4.2-1) ... Setting up libbpp-raa-dev:amd64 (2.4.1-7) ... Setting up libdevel-symdump-perl (2.18-5) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libtbb-dev:amd64 (2021.8.0-2) ... Setting up coinor-libcgl1:amd64 (0.60.3+repack1-4) ... Setting up libfastinfoset-java (1.2.12-3) ... Setting up mesa-va-drivers:amd64 (22.3.6-1+deb12u1) ... Setting up librg-blast-parser-perl (0.03-9+b1) ... Setting up libwww-form-urlencoded-xs-perl:amd64 (0.28-1+b1) ... Setting up libngs-java:amd64 (3.0.3+dfsg-6~deb12u1) ... Setting up eigensoft (8.0.0+dfsg-1) ... Setting up libexporter-tiny-perl (1.006000-1) ... Setting up twopaco (1.0.0+dfsg-1) ... Setting up libpangoft2-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libclass-accessor-perl (0.51-2) ... Setting up embassy-domsearch (1:0.1.660-3) ... Setting up libstaden-read14:amd64 (1.14.15-1) ... Setting up libtext-unidecode-perl (1.30-3) ... Setting up libclc-15 (1:15.0.6-4) ... Setting up libmagick++-6.q16-8:amd64 (8:6.9.11.60+dfsg-1.6) ... Setting up libva-x11-2:amd64 (2.17.0-1) ... Setting up gff2aplot (2.0-14) ... Setting up libprefork-perl (1.05-2) ... Setting up libmath-matrixreal-perl (2.13-2) ... Setting up mailcap (3.70+nmu1) ... Setting up libpoppler-cpp0v5:amd64 (22.12.0-2+b1) ... Setting up libguard-perl (1.023-2+b1) ... Setting up libpostscript-perl (0.06-3.1) ... Setting up libmodule-refresh-perl (0.18-2) ... Setting up libasa-perl (1.04-3) ... Setting up libsys-hostname-long-perl (1.5-3) ... Setting up libxrender-dev:amd64 (1:0.9.10-1.1) ... Setting up libsort-naturally-perl (1.03-4) ... Setting up tex-gyre (20180621-6) ... Setting up barrnap (0.9+dfsg-3) ... Setting up liburi-perl (5.17-1) ... Setting up libx11-protocol-perl (0.56-9) ... Setting up libappconfig-perl (1.71-2.2) ... Setting up libdbi-perl:amd64 (1.643-4) ... Setting up gmap (2021-12-17+ds-3) ... Setting up libhtsjdk-java (3.0.4+dfsg-2) ... Setting up libdate-manip-perl (6.91-1) ... Setting up i965-va-driver:amd64 (2.4.1+dfsg1-1) ... Setting up staden-io-lib-utils (1.14.15-1) ... Setting up libclass-makemethods-perl (1.01-7) ... Setting up profbval (1.0.22-8) ... Setting up libfile-sort-perl (1.01-3) ... Setting up libpangocairo-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libqt6dbus6:amd64 (6.4.2+dfsg-10) ... Setting up libc-devtools (2.36-9+deb12u4) ... Setting up libmath-vec-perl (1.01-5) ... Setting up libclone-pp-perl (1.08-2) ... Setting up libtext-csv-perl (2.02-2) ... Setting up libhdf5-hl-100:amd64 (1.10.8+repack1-1) ... Setting up flexbar (1:3.5.0-5) ... Setting up llvm-14 (1:14.0.6-12) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up cd-hit (4.8.1-4) ... Setting up libmath-spline-perl (0.02-4) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libqt6concurrent6:amd64 (6.4.2+dfsg-10) ... Setting up libarray-utils-perl (0.5-3) ... Setting up libmodule-pluggable-perl (5.2-4) ... Setting up libanyevent-perl (7.170-2+b3) ... Setting up libjcode-pm-perl (2.06-1.1) ... Setting up postgresql-client-common (248) ... Setting up libio-sessiondata-perl (1.03-3) ... Setting up mesa-opencl-icd:amd64 (22.3.6-1+deb12u1) ... Setting up libberkeleydb-perl:amd64 (0.64-2+b1) ... Setting up librdmacm1:amd64 (44.0-2) ... Setting up mesa-vulkan-drivers:amd64 (22.3.6-1+deb12u1) ... Setting up sra-toolkit (3.0.3+dfsg-6~deb12u1) ... Setting up vcftools (0.1.16-3+b1) ... Setting up mesa-vdpau-drivers:amd64 (22.3.6-1+deb12u1) ... Setting up libbpp-phyl-omics-dev:amd64 (2.4.1-4) ... Setting up libg20 (0.72-11) ... Setting up libstring-approx-perl (3.28-2+b1) ... Setting up rnahybrid (2.1.2-7) ... Setting up coinor-libcbc3:amd64 (2.10.8+ds1-1) ... Setting up libuniversal-moniker-perl (0.08-10) ... Setting up liblingua-en-inflect-perl (1.905-2) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-slurper-perl (0.014-1) ... Setting up simka (1.5.3-7) ... Setting up libfile-which-perl (1.27-2) ... Setting up rtax (0.984-8) ... Setting up libucx0:amd64 (1.13.1-1) ... Setting up libxft2:amd64 (2.3.6-1) ... Setting up libhts3:amd64 (1.16+ds-3) ... Setting up libxmu-headers (2:1.1.3-3) ... Setting up libxmu6:amd64 (2:1.1.3-3) ... Setting up libfile-slurp-perl (9999.32-2) ... Setting up libqt5qmlmodels5:amd64 (5.15.8+dfsg-3) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libtie-ixhash-perl (1.23-4) ... Setting up libfile-copy-link-perl (0.140-4) ... Setting up libconfig-general-perl (2.65-2) ... Setting up libplexus-io-java (3.3.1-2) ... Setting up libtask-weaken-perl (1.06-2) ... Setting up libunicode-utf8-perl (0.62-2) ... Setting up libglx-mesa0:amd64 (22.3.6-1+deb12u1) ... Setting up embassy-domalign (0.1.660-4) ... Setting up xdg-desktop-portal (1.16.0-2) ... Created symlink /etc/systemd/user/graphical-session-pre.target.wants/xdg-desktop-portal-rewrite-launchers.service → /usr/lib/systemd/user/xdg-desktop-portal-rewrite-launchers.service. Setting up trace2dbest (3.0.1-2) ... Setting up libset-intspan-perl (1.19-3) ... Setting up xfonts-100dpi (1:1.0.5) ... Setting up libossp-uuid-perl (1.6.2-1.5+b11) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libhttp-multipartparser-perl (0.02-3) ... Setting up libxerces-c3.2:amd64 (3.2.4+debian-1) ... Setting up mime-support (3.66) ... Setting up emboss (6.6.0+dfsg-12) ... Setting up libqt5sql5-sqlite:amd64 (5.15.8+dfsg-11) ... Setting up libparse-yapp-perl (1.21-3) ... Setting up libnet-httpserver-perl (1.1.1-4) ... Setting up libpangoxft-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libbigwig-dev:amd64 (0.4.7+dfsg-3) ... Setting up libfetk1.9:amd64 (3.4.1-5) ... Setting up libconvert-binary-c-perl (0.84-1+b2) ... Setting up libxi6:amd64 (2:1.8-1+b1) ... Setting up libglx0:amd64 (1.6.0-1) ... Setting up libhttp-headers-fast-perl (0.22-3) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libfont-afm-perl (1.20-4) ... Setting up libwant-perl (0.29-2+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libmagickcore-6.q16-6-extra:amd64 (8:6.9.11.60+dfsg-1.6) ... Setting up libtest-deep-perl (1.204-1) ... Setting up libproj25:amd64 (9.1.1-1+b1) ... Setting up libclass-method-modifiers-perl (2.14-1) ... Setting up libxml-regexp-perl (0.04-1.1) ... Setting up libref-util-xs-perl (0.117-2+b1) ... Setting up libcommons-validator-java (1:1.7-1) ... Setting up libalgorithm-munkres-perl (0.08-5) ... Setting up libfile-pushd-perl (1.016-2) ... Setting up perl-tk (1:804.036-1+b2) ... Setting up libio-pty-perl (1:1.17-1) ... Setting up libsphinxbase3:amd64 (0.8+5prealpha+1-16) ... Setting up libmime-types-perl (2.24-1) ... Setting up libfile-fcntllock-perl (0.22-4+b1) ... Setting up libpath-class-perl (0.37-4) ... Setting up libqt5xmlpatterns5:amd64 (5.15.8-2) ... Setting up populations (1.2.33+svn0120106+dfsg-6) ... Setting up libssu0:amd64 (1.2-2) ... Setting up mafft (7.505-1) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libgetopt-simple-perl (1.52-7) ... Setting up freecontact (1.0.21-13) ... Setting up gatb-core (1.4.2+dfsg-11) ... Setting up libsis-jhdf5-java (19.04.1+dfsg-3) ... Setting up libio-stringy-perl (2.111-3) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libxtst6:amd64 (2:1.2.3-1.1) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libtest-file-perl (1.993-1) ... Setting up libqt5remoteobjects5:amd64 (5.15.8-2) ... Setting up libbatik-java (1.16+dfsg-1+deb12u1) ... Setting up liblog4j2-java (2.19.0-2) ... Setting up libauthen-sasl-perl (2.1600-3) ... Setting up scrappie (1.4.2-8+b3) ... Setting up preview-latex-style (12.2-1) ... Setting up libquazip1-qt6-1:amd64 (1.4-1) ... Setting up libzerg-perl (1.0.4-8+b2) ... Setting up libpython3.11-stdlib:amd64 (3.11.2-6) ... Setting up bio-eagle (2.4.1-3+b1) ... Setting up abacas (1.3.1-9) ... Setting up libtk8.6:amd64 (8.6.13-2) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libxcursor1:amd64 (1:1.2.1-1) ... Setting up libbio-scf-perl (1.03-6+b1) ... Setting up libfilesys-notify-simple-perl (0.14-3) ... Setting up libfile-slurp-tiny-perl (0.004-2) ... Setting up libipc-sharelite-perl (0.17-5) ... Setting up libfilesys-df-perl (0.92-7+b1) ... Setting up libdebuginfod1:amd64 (0.188-2.1) ... Setting up libconvert-binhex-perl (1.125-3) ... Setting up libheap-perl (0.80-5) ... Setting up libpod-coverage-perl (0.23-2) ... Setting up libperl4-corelibs-perl (0.004-3) ... Setting up toppred (1.10-10) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up bcftools (1.16-1) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up libhmsbeagle1v5:amd64 (3.1.2+dfsg-13) ... Setting up libraptor2-0:amd64 (2.0.15-4) ... Setting up libapbs3:amd64 (3.4.1-5) ... Setting up libtest-pod-perl (1.52-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up libtype-tiny-perl (2.002001-1) ... Setting up segemehl (0.3.4-5) ... Setting up libxxf86dga1:amd64 (2:1.1.5-1) ... Setting up perl-doc (5.36.0-7+deb12u1) ... Setting up libgraphics-colorobject-perl (0.5.0-10) ... Setting up libcommon-sense-perl:amd64 (3.75-3) ... Setting up libmldbm-perl (2.05-4) ... Setting up libball1.5 (1.5.0+git20180813.37fc53c-11) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libsvg-perl (2.87-1) ... Setting up estscan (3.0.3-6) ... Setting up libnet-http-perl (6.22-1) ... Setting up libanyevent-http-perl (2.25-2) ... Setting up libtest-fork-perl (0.02-4) ... Setting up proj-bin (9.1.1-1+b1) ... Setting up mrbayes (3.2.7a-6) ... Setting up postgresql-client-15 (15.5-0+deb12u1) ... update-alternatives: using /usr/share/postgresql/15/man/man1/psql.1.gz to provide /usr/share/man/man1/psql.1.gz (psql.1.gz) in auto mode Setting up libclone-choose-perl (0.010-2) ... Setting up libposix-strftime-compiler-perl (0.44-3) ... Setting up libbsd-resource-perl (1.2911-2+b1) ... Setting up libopenbabel7 (3.1.1+dfsg-9+b3) ... Setting up libclass-accessor-chained-perl (0.01.1~debian-5) ... Setting up libclass-singleton-perl (1.6-2) ... Setting up metabat (2.15-4) ... Setting up libwww-curl-perl:amd64 (4.17-10) ... Setting up libqmi-proxy (1.32.2-1) ... Setting up libpadwalker-perl (2.5-1+b3) ... Setting up libencode-locale-perl (1.05-3) ... Setting up any2fasta (0.4.2-2) ... Setting up libdbd-pg-perl (3.16.0-2) ... Setting up dconf-service (0.40.0-4) ... Setting up libtext-csv-xs-perl:amd64 (1.49-1) ... Setting up libipc-shareable-perl (1.13-1) ... Setting up libtext-tabulardisplay-perl (1.38-3) ... Setting up fsa (1.15.9+dfsg-6) ... Setting up libnumber-format-perl (1.75-3) ... Setting up predictnls (1.0.20-8) ... Setting up seer (1.1.4-7) ... Setting up libexception-class-perl (1.45-1) ... Setting up libfindbin-libs-perl (3.0.2-1) ... Setting up libai-fann-perl (0.10-5+b3) ... Setting up libxaw7:amd64 (2:1.0.14-1) ... Setting up libdevel-argnames-perl (0.03-3) ... Setting up libio-all-perl (0.87-2) ... Setting up libatspi2.0-0:amd64 (2.46.0-5) ... Setting up libclass-c3-perl (0.35-2) ... Setting up fonts-urw-base35 (20200910-7) ... Setting up libxstring-perl:amd64 (0.005-2+b1) ... Setting up libgraph-perl (1:0.9726-1) ... Setting up libcpan-changes-perl (0.400002-3) ... Setting up libconfig-tiny-perl (2.28-2) ... Setting up libibverbs-dev:amd64 (44.0-2) ... Setting up apache2-bin (2.4.57-2) ... Setting up libhwloc-plugins:amd64 (2.9.0-1) ... Setting up libnhgri-blastall-perl (0.66-4) ... Setting up x11-xserver-utils (7.7+9+b1) ... Setting up profisis (1.0.11-7) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up libany-uri-escape-perl (0.01-4) ... Setting up libyaml-perl (1.30-2) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up rna-star (2.7.10b+dfsg-2+b2) ... Setting up libclass-c3-xs-perl (0.15-1+b3) ... Setting up libfcgi-procmanager-perl (0.28-3) ... Setting up libregexp-common-perl (2017060201-3) ... Setting up libmath-bezier-perl (0.01-4) ... Setting up libtest-sharedfork-perl (0.35-3) ... Setting up samclip (0.4.0-4) ... Setting up libdata-dumper-concise-perl (2.023-3) ... Setting up libspreadsheet-writeexcel-perl (2.40-4) ... Setting up libdevel-caller-perl:amd64 (2.06-3+b1) ... Setting up libmath-random-mt-perl (1.17-2+b1) ... Setting up libsub-install-perl (0.929-1) ... Setting up gcc (4:12.2.0-3) ... Setting up dpkg-dev (1.21.22) ... Setting up libgeotiff5:amd64 (1.7.1-2+b1) ... Setting up samtools (1.16.1-1) ... Setting up libbit-vector-perl:amd64 (7.4-2+b1) ... Setting up libhash-multivalue-perl (0.16-3) ... Setting up libdata-compare-perl (1.27-3) ... Setting up libmodule-build-perl (0.423200-1) ... Setting up libqt5qmlworkerscript5:amd64 (5.15.8+dfsg-3) ... Setting up hdf5-tools (1.10.8+repack1-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libfreezethaw-perl (0.5001-3) ... Setting up libscope-guard-perl (0.21-2) ... Setting up librsvg2-2:amd64 (2.54.7+dfsg-1~deb12u1) ... Setting up libcbf1:amd64 (0.9.7+dfsg1-2+b2) ... Setting up liberror-perl (0.17029-2) ... Setting up libsort-key-top-perl (0.08-4+b2) ... Setting up libdigest-perl-md5-perl (1.9-5) ... Setting up salmon (1.10.1+ds1-1+b1) ... Setting up libpocketsphinx3:amd64 (0.8+5prealpha+1-15) ... Setting up bio-rainbow (2.0.4+dfsg-2) ... Setting up bcalm (2.2.3-4) ... Setting up libmail-sendmail-perl (0.80-3) ... Setting up mecat2 (0.0+git20200428.f54c542+ds-3) ... Setting up libatk-bridge2.0-0:amd64 (2.46.0-5) ... Setting up libdbix-contextualfetch-perl (1.03-5) ... Setting up gnustep-base-runtime (1.28.1+really1.28.0-5) ... Setting up libltdl-dev:amd64 (2.4.7-5) ... Setting up libgd-perl (2.76-4+b1) ... Setting up qtbase5-dev-tools (5.15.8+dfsg-11) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libreadonly-perl (2.050-3) ... Setting up libavutil57:amd64 (7:5.1.4-0+deb12u1) ... Setting up stringtie (2.2.1+ds-2) ... Setting up libunicode-map-perl (0.112-13+b1) ... Setting up libdevel-lexalias-perl (0.05-3+b1) ... Setting up libmath-tamuanova-perl (1.0.2-3+b1) ... Setting up libdevel-stacktrace-ashtml-perl (0.15-2) ... Setting up libbiococoa2 (2.2.2-6) ... Setting up repeatmasker-recon (1.08-7+b1) ... Setting up gir1.2-pango-1.0:amd64 (1.50.12+ds-1) ... Setting up libgphoto2-6:amd64 (2.5.30-1) ... Setting up libhdf5-hl-cpp-100:amd64 (1.10.8+repack1-1) ... Setting up stacks (2.62+dfsg-1) ... Setting up mindthegap (2.3.0-2) ... Setting up gstreamer1.0-plugins-base:amd64 (1.22.0-3+deb12u1) ... Setting up libgl1:amd64 (1.6.0-1) ... Setting up libbio-mage-utils-perl (20030502.0-5) ... Setting up libqt6gui6:amd64 (6.4.2+dfsg-10) ... Setting up libima-dbi-perl (0.35-3) ... Setting up coinor-cbc (2.10.8+ds1-1) ... Setting up libapache-logformat-compiler-perl (0.36-3) ... Setting up libhttpmime-java (4.5.14-1) ... Setting up libbio-mage-perl (20030502.3-6) ... Setting up libtest-exception-perl (0.43-3) ... Setting up libdata-page-perl (2.03-1) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libswresample4:amd64 (7:5.1.4-0+deb12u1) ... Setting up va-driver-all:amd64 (2.17.0-1) ... Setting up libxt-dev:amd64 (1:1.2.1-1.1) ... Setting up libglut3.12:amd64 (3.4.0-1) ... Setting up gsfonts (2:20200910-7) ... Setting up libunicode-linebreak-perl (0.0.20190101-1+b5) ... Setting up sphinx-common (5.3.0-4) ... Setting up libanyevent-cachedns-perl (0.08-3) ... Setting up jellyfish (2.3.0-15+b3) ... Setting up r-base-core (4.2.2.20221110-2) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.5.2-1) ... Setting up r-cran-squarem (2021.1-1) ... Setting up minia (3.2.6-3) ... Setting up embassy-domainatrix (0.1.660-4) ... Setting up libshout3:amd64 (2.4.6-1+b1) ... Setting up megadepth (1.2.0-4) ... Setting up maqview (0.2.5-11) ... Setting up libgvc6 (2.42.2-7+b3) ... Setting up r-cran-fastmatch (1.1-3-1+b1) ... Setting up r-cran-gtable (0.3.1+dfsg-1) ... Setting up libdbd-mysql-perl:amd64 (4.050-5+b1) ... Setting up libdecor-0-plugin-1-cairo:amd64 (0.1.1-2) ... Setting up r-cran-labeling (0.4.2-1) ... Setting up r-cran-rgenoud (5.9-0.3-1) ... Setting up libdata-optlist-perl (0.113-1) ... Setting up libhdf5-fortran-102:amd64 (1.10.8+repack1-1) ... Setting up r-cran-rcppprogress (0.4.2-2) ... Setting up r-cran-sourcetools (0.1.7-1-1) ... Setting up librg-utils-perl (1.0.43-8) ... Setting up librcsb-core-wrapper0 (1.005-11+b1) ... Setting up libipc-run-perl (20220807.0-1) ... Setting up r-cran-futile.options (1.0.1-3) ... Setting up libtest-output-perl (1.033-2) ... Setting up r-cran-argparser (0.7.1-1) ... Setting up git (1:2.39.2-1.1) ... Setting up r-cran-rsvg (2.4.0-1) ... Setting up librsvg2-common:amd64 (2.54.7+dfsg-1~deb12u1) ... Setting up r-cran-lattice (0.20-45-3) ... Setting up r-cran-tinytest (1.4.1-1) ... Setting up r-cran-ps (1.7.2-1) ... Setting up libclass-base-perl (0.09-2) ... Setting up libglew2.2:amd64 (2.2.0-4+b1) ... Setting up r-cran-nlme (3.1.162-1) ... Setting up r-cran-modeltools (0.2-23-2) ... Setting up libclass-autouse-perl (2.01-1.1) ... Setting up libtemplate-perl (2.27-1+b5) ... Setting up libfile-desktopentry-perl (0.22-3) ... Setting up r-cran-farver (2.1.1-1) ... Setting up r-cran-pls (2.8-1-1) ... Setting up r-cran-formatr (1.14-1) ... Setting up r-cran-pbapply (1.7-0-1) ... Setting up r-cran-formula (1.2-4-1) ... Setting up r-cran-hexbin (1.28.2-1) ... Setting up r-cran-polspline (1.1.22-1) ... Setting up openjdk-17-jre-headless:amd64 (17.0.10+7-1~deb12u1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libole-storage-lite-perl (0.20-2) ... Setting up libspreadsheet-parseexcel-perl (0.6500-4~deb12u1) ... Setting up libcontextual-return-perl (0.004014-4) ... Setting up r-cran-remotes (2.4.2-1) ... Setting up imagemagick-6.q16 (8:6.9.11.60+dfsg-1.6) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up libwww-robotrules-perl (6.02-1) ... Setting up r-cran-zip (2.2.2-1+b1) ... Setting up r-cran-xml (3.99-0.13-1) ... Setting up libnetcdf19:amd64 (1:4.9.0-3+b1) ... Setting up zutty (0.14.0.20230218+dfsg1-1) ... update-alternatives: using /usr/bin/zutty to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode Setting up r-cran-intervals (0.15.2-1+b1) ... Setting up r-cran-spatstat.utils (3.0-1-1) ... Setting up libtypes-serialiser-perl (1.01-1) ... Setting up libtree-dagnode-perl (1.32-1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up libclass-trigger-perl (0.15-2) ... Setting up r-cran-whisker (0.4.1-1) ... Setting up liboglappth2 (1.0.0-2+b2) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up r-cran-viridislite (0.4.1-1) ... Setting up r-cran-locfit (1.5-9.7-1) ... Setting up texlive-binaries (2022.20220321.62855-5.1+deb12u1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up r-cran-g.data (2.4-4) ... Setting up pftools (3.2.12-1) ... Setting up libqt6network6:amd64 (6.4.2+dfsg-10) ... Setting up libsimbody3.7:amd64 (3.7+dfsg-3) ... Setting up r-cran-pixmap (0.4-12-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up r-cran-cluster (2.1.4-1) ... Setting up libpbbam2.1.0:amd64 (2.1.0+dfsg-2) ... Setting up libtabixpp0:amd64 (1.1.2-1) ... Setting up r-cran-fontbitstreamvera (0.1.1+dfsg-4) ... Setting up genometools-common (1.6.2+ds-3) ... Setting up r-cran-sparsem (1.81-1) ... Setting up r-cran-statmod (1.5.0-1) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libclass-dbi-perl (3.0.17-5) ... Setting up x11-utils (7.7+5) ... Setting up libconfig-any-perl (0.32-3) ... Setting up libplexus-archiver-java (4.6.1-1) ... Setting up libhdf5-hl-fortran-100:amd64 (1.10.8+repack1-1) ... Setting up libfile-sharedir-perl (1.118-3) ... Setting up libc6-dev:amd64 (2.36-9+deb12u4) ... Setting up r-cran-nnet (7.3-18-1) ... Setting up libglx-dev:amd64 (1.6.0-1) ... Setting up libcgi-compile-perl (0.25-1) ... Setting up libdbd-sqlite3-perl:amd64 (1.72-1) ... Setting up r-cran-tensor (1.5-4) ... Setting up libgd-svg-perl (0.33-3) ... Setting up r-cran-lazyeval (0.2.2-1+b1) ... Setting up crac (2.5.2+dfsg-5+b1) ... Setting up libpostproc56:amd64 (7:5.1.4-0+deb12u1) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up r-cran-lpsolve (5.6.18-1) ... Setting up libatk-wrapper-java (0.40.0-3) ... Setting up r-cran-wk (0.7.1-1) ... Setting up r-cran-clipr (0.8.0-1) ... Setting up r-cran-polynom (1.4-1+dfsg-1) ... Setting up r-cran-commonmark (1.8.1-1) ... Setting up pbbamtools (2.1.0+dfsg-2) ... Setting up libmro-compat-perl (0.15-2) ... Setting up r-cran-proxy (0.4-27-1) ... Setting up libtext-recordparser-perl (1.6.5-4) ... Setting up libcookie-baker-perl (0.11-3) ... Setting up r-cran-r6 (2.5.1-1) ... Setting up r-cran-pkgkitten (0.2.2-2) ... Setting up r-cran-jpeg (0.1-10-1) ... Setting up r-cran-dfoptim (2020.10-1-1) ... Setting up libgenometools0 (1.6.2+ds-3) ... Setting up librg-reprof-bundle-perl (1.0.1-8) ... Setting up libavcodec59:amd64 (7:5.1.4-0+deb12u1) ... Setting up r-cran-gsa (1.03.2-1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up libsdl2-2.0-0:amd64 (2.26.5+dfsg-1) ... Setting up libswscale6:amd64 (7:5.1.4-0+deb12u1) ... Setting up r-cran-chron (2.3-59-1) ... Setting up r-cran-numderiv (2016.8-1.1-3) ... Setting up libdirectfb-1.7-7:amd64 (1.7.7-11) ... Setting up libvdpau-va-gl1:amd64 (0.4.2-1+b1) ... Setting up libev-perl:amd64 (4.33-2) ... Setting up r-cran-fastcluster (1.2.3-2) ... Setting up r-cran-genabel.data (1.0.0-4) ... Setting up kallisto (0.48.0+dfsg-3) ... Setting up r-cran-coda (0.19-4-1) ... Setting up texlive-base (2022.20230122-3) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libqmi-utils (1.32.2-1) ... Setting up r-cran-rsclient (0.7-9-1) ... Setting up libalgorithm-diff-xs-perl:amd64 (0.04-8+b1) ... Setting up adun-core (0.81-14+b3) ... Setting up r-cran-rcppparallel (5.1.6+dfsg-1) ... Setting up libicu-dev:amd64 (72.1-3) ... Setting up r-cran-magrittr (2.0.3-1) ... Setting up r-cran-randomfieldsutils (1.2.5-1) ... Setting up r-cran-testit (0.13-1) ... Setting up libgl-dev:amd64 (1.6.0-1) ... Setting up libio-socket-ssl-perl (2.081-2) ... Setting up r-cran-rappdirs (0.3.3-1) ... Setting up libseqlib2:amd64 (1.2.0+dfsg-9) ... Setting up r-cran-filelock (1.0.2-2) ... Setting up r-cran-deoptim (2.2-8-1) ... Setting up libbarclay-java (4.1.0+dfsg-1) ... Setting up libxm4:amd64 (2.3.8-3) ... Setting up r-bioc-genomeinfodbdata (1.2.9-1) ... Setting up libfluidsynth3:amd64 (2.3.1-2) ... Setting up r-cran-evd (2.3-6.1-1) ... Setting up libsub-exporter-perl (0.989-1) ... Setting up libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up libstatistics-basic-perl (1.6611-3) ... Setting up r-cran-gridgraphics (0.5-1-1) ... Setting up libalgorithm-merge-perl (0.08-5) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libeval-closure-perl (0.14-3) ... Setting up r-cran-registry (0.5-1-2) ... Setting up r-cran-quadprog (1.5-8-1+b1) ... Setting up gobjc-12 (12.2.0-14) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libbz2-dev:amd64 (1.0.8-5+b1) ... Setting up libasync-interrupt-perl (1.26-1+b3) ... Setting up r-cran-littler (0.3.17-1) ... Setting up r-cran-prettycode (1.1.0-2) ... Setting up libchromaprint1:amd64 (1.5.1-2+b1) ... Setting up r-cran-nleqslv (3.3.4-1) ... Setting up r-cran-permute (0.9-7-1) ... Setting up reprof (1.0.1-8) ... Setting up augustus (3.5.0+dfsg-2) ... Setting up libpod-markdown-perl (3.300000-2) ... Setting up libopencv-core406:amd64 (4.6.0+dfsg-12) ... Setting up libspatialite7:amd64 (5.0.1-3) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libbio-perl-run-perl (1.7.3-9) ... Setting up libjson-xs-perl (4.030-2+b1) ... Setting up libsimtkmolmodel3.1:amd64 (3.1.0-2) ... Setting up libplot2c2:amd64 (2.6-13) ... Setting up delly (1.1.6-1) ... Setting up graphviz (2.42.2-7+b3) ... Setting up tk8.6 (8.6.13-2) ... Setting up libfabric1:amd64 (1.17.0-3) ... Setting up libgs10-common (10.0.0~dfsg-11+deb12u3) ... Setting up gobjc (4:12.2.0-3) ... Setting up r-cran-ncdf4 (1.21-1) ... Setting up r-cran-fs (1.6.1+dfsg-1) ... Setting up r-cran-rcpp (1.0.10-1) ... Setting up r-cran-palmerpenguins (0.1.1-1) ... Setting up r-cran-optimparallel (1.0-2-2) ... Setting up libfile-mimeinfo-perl (0.33-1) ... Setting up libhmsbeagle-dev (3.1.2+dfsg-13) ... Setting up r-cran-curl (5.0.0+dfsg-1) ... Setting up r-cran-combinat (0.0-8-7) ... Setting up libbio-alignio-stockholm-perl (1.7.3-2) ... Setting up r-cran-profmem (0.6.0+dfsg-1) ... Setting up swi-prolog-x (9.0.4+dfsg-2) ... Setting up r-cran-codetools (0.2-19-1) ... Setting up r-cran-brio (1.1.3-1+b1) ... Setting up r-cran-estimability (1.4.1-1) ... Setting up python3.11 (3.11.2-6) ... Setting up r-cran-boot (1.3-28.1-1) ... Setting up r-cran-inline (0.3.19-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up r-cran-diffobj (0.3.5-1+b1) ... Setting up r-cran-rematch (1.0.1-3) ... Setting up r-cran-waveslim (1.8.4-1) ... Setting up btllib-tools (1.4.10+dfsg-1) ... Setting up libclass-dbi-pg-perl (0.09-6) ... Setting up libopencv-ml406:amd64 (4.6.0+dfsg-12) ... Setting up libparams-validationcompiler-perl (0.31-1) ... Setting up r-cran-maps (3.4.1-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Setting up r-cran-diptest (0.76-0-1+b1) ... Setting up libncurses-dev:amd64 (6.4-4) ... Setting up r-bioc-biocgenerics (0.44.0-2) ... Setting up r-other-mott-happy.hbrem (2.4-5) ... Setting up r-cran-rlang (1.0.6-1) ... Setting up r-cran-minpack.lm (1.2-3-1) ... Setting up libtest-tcp-perl (2.22-2) ... Setting up libtext-simpletable-perl (2.07-1) ... Setting up r-cran-matrixstats (0.63.0-1) ... Setting up gstreamer1.0-x:amd64 (1.22.0-3+deb12u1) ... Setting up r-cran-gridbase (0.4-7-5) ... Setting up r-cran-gbrd (0.4-11-2) ... Setting up libstatistics-descriptive-perl (3.0800-1) ... Setting up r-cran-listenv (0.9.0+dfsg-1) ... Setting up r-cran-assertthat (0.2.1-2) ... Setting up littler (0.3.17-1) ... Setting up libfop-java (1:2.8-2) ... Setting up bamclipper (1.0.0-3) ... Setting up postgresql-client (15+248) ... Setting up libpython3.11:amd64 (3.11.2-6) ... Setting up libdate-calc-perl (6.4-2) ... Setting up r-cran-multicool (0.1-12-1) ... Setting up qt6-qpa-plugins:amd64 (6.4.2+dfsg-10) ... Setting up libpcre2-dev:amd64 (10.42-1) ... Setting up r-cran-pracma (2.4.2-1) ... Setting up libavformat59:amd64 (7:5.1.4-0+deb12u1) ... Setting up libpstoedit0c2a:amd64 (3.78-2) ... Setting up libcache-cache-perl (1.08-3) ... Setting up vt (0.57721+ds-3) ... Setting up libdbix-dbschema-perl (0.47-1) ... Setting up gnustep-make (2.9.1-2) ... Setting up altree (1.3.2-1+b3) ... Setting up libssu-dev:amd64 (1.2-2) ... Setting up dconf-gsettings-backend:amd64 (0.40.0-4) ... Setting up r-cran-uroot (2.1-2-1) ... Setting up r-cran-bio3d (2.4-4-1) ... Setting up libegl-dev:amd64 (1.6.0-1) ... Setting up r-cran-pvclust (2.2-0-2) ... Setting up libpmix2:amd64 (4.2.2-1+deb12u1) ... Setting up r-bioc-matrixgenerics (1.10.0-1) ... Setting up libstdc++-12-dev:amd64 (12.2.0-14) ... Setting up r-cran-dynamictreecut (1.63-1-3) ... Setting up r-cran-uuid (1.1-0-1) ... Setting up libhmsbeagle-java:amd64 (3.1.2+dfsg-13) ... Setting up qtltools (1.3.1+dfsg-4) ... Setting up r-cran-xfun (0.37+dfsg-1) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libtool (2.4.7-5) ... Setting up r-cran-rcpphnsw (0.4.1+ds-2) ... Setting up r-cran-urca (1.3-3-1) ... Setting up r-cran-sys (3.4.1-1) ... Setting up genomethreader (1.7.3+dfsg-7) ... Setting up r-cran-deoptimr (1.0-11-1) ... Setting up libdate-calc-xs-perl:amd64 (6.4-2+b1) ... Setting up r-bioc-impute (1.72.3-1) ... Setting up r-cran-plogr (0.2.0-3) ... Setting up r-cran-withr (2.5.0-1) ... Setting up r-cran-backports (1.4.1-1) ... Setting up libstatistics-pca-perl (0.0.1-2) ... Setting up r-cran-mathjaxr (1.6-0-1) ... Setting up libpcre3-dev:amd64 (2:8.39-15) ... Setting up libgkl-java (0.8.10+dfsg-3) ... Setting up r-cran-processx (3.8.0-1) ... Setting up r-cran-gsl (2.1-8-1) ... Setting up r-cran-mime (0.12-1+b1) ... Setting up liblrdf0:amd64 (0.6.1-4) ... Setting up r-cran-praise (1.0.0-4) ... Setting up r-cran-vipor (0.4.5-3) ... Setting up r-cran-generics (0.1.3-1) ... Setting up r-cran-base64enc (0.1-3-3) ... Setting up r-cran-beeswarm (0.4.0-1+b1) ... Setting up r-cran-iterators (1.0.14-1) ... Setting up r-cran-spatial (7.3-16-1) ... Setting up r-cran-fontliberation (0.1.0+dfsg-4) ... Setting up r-cran-abind (1.4-5-2) ... Setting up r-cran-s2 (1.1.2-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libgtk2.0-0:amd64 (2.24.33-2) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libopenmpi3:amd64 (4.1.4-3+b1) ... Setting up apache2 (2.4.57-2) ... Enabling module mpm_event. Enabling module authz_core. Enabling module authz_host. Enabling module authn_core. Enabling module auth_basic. Enabling module access_compat. Enabling module authn_file. Enabling module authz_user. Enabling module alias. Enabling module dir. Enabling module autoindex. Enabling module env. Enabling module mime. Enabling module negotiation. Enabling module setenvif. Enabling module filter. Enabling module deflate. Enabling module status. Enabling module reqtimeout. Enabling conf charset. Enabling conf localized-error-pages. Enabling conf other-vhosts-access-log. Enabling conf security. Enabling conf serve-cgi-bin. Enabling site 000-default. info: Executing deferred 'a2enconf javascript-common' for package javascript-common Enabling conf javascript-common. Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Created symlink /etc/systemd/system/multi-user.target.wants/apache2.service → /lib/systemd/system/apache2.service. Created symlink /etc/systemd/system/multi-user.target.wants/apache-htcacheclean.service → /lib/systemd/system/apache-htcacheclean.service. Setting up r-cran-digest (0.6.31-1) ... Setting up blt (2.5.3+dfsg-4.1) ... Setting up r-cran-ape (5.7-1) ... Setting up librdkit1 (202209.3-1) ... Setting up r-cran-sfsmisc (1.1-14-1) ... Setting up libfltk1.3:amd64 (1.3.8-5) ... Setting up r-cran-yaml (2.3.7-1) ... Setting up libbio-db-hts-perl (3.01-4+b1) ... Setting up r-cran-ica (1.0-3-1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up librasqal3:amd64 (0.9.33-2) ... Setting up r-cran-lambda.r (1.2.4-2) ... Setting up r-cran-xml2 (1.3.3-1+b1) ... Setting up r-cran-webfakes (1.1.7-1) ... Setting up libcgi-pm-perl (4.55-1) ... Setting up r-cran-rann (2.6.1-1+b2) ... Setting up r-bioc-protgenerics (1.30.0-1) ... Setting up libfltk-gl1.3:amd64 (1.3.8-5) ... Setting up libboost-mpi1.74.0 (1.74.0+ds1-21) ... Setting up r-cran-gower (1.0.1-1) ... Setting up r-cran-evaluate (0.20-1) ... Setting up libqt5gui5:amd64 (5.15.8+dfsg-11) ... Setting up libhash-merge-perl (0.302-1) ... Setting up grinder (0.5.4-6) ... Setting up r-cran-docopt (0.7.1-2) ... Setting up r-cran-triebeard (0.3.0-4) ... Setting up r-cran-dbi (1.1.3-1) ... Setting up r-cran-timedate (4022.108-1) ... Setting up texlive-plain-generic (2022.20230122-4) ... Setting up r-cran-highr (0.10+dfsg-1) ... Setting up r-cran-foreach (1.5.2-1) ... Setting up librcsb-core-wrapper0-dev (1.005-11+b1) ... Setting up r-cran-prettyunits (1.1.1-2) ... Setting up r-cran-fansi (1.0.4-1) ... Setting up libtest-differences-perl (0.69-1) ... Setting up staden-common (2.0.0+b11-4) ... Setting up r-cran-fastica (1.2-3-1+b1) ... Setting up r-cran-cardata (3.0.5-1) ... Setting up r-cran-pcict (0.5-4.4-1) ... Setting up libmaven-archiver-java (3.6.0-1) ... Setting up r-cran-mass (7.3-58.2-1) ... Setting up sfftw2 (2.1.5-6) ... Setting up libwildmagic5:amd64 (5.17+cleaned1-6) ... Setting up r-cran-magick (2.7.3+dfsg-3) ... Setting up r-cran-mockr (0.2.1-1) ... Setting up libvibrant6b:amd64 (6.1.20170106+dfsg1-10) ... Setting up r-cran-checkmate (2.1.0-1) ... Setting up r-cran-cairo (1.6-0-1) ... Setting up r-cran-acepack (1.4.1-2+b5) ... Setting up r-cran-mclust (6.0.0-1) ... Setting up aegean (0.16.0+dfsg-2) ... Setting up libmmb4.0:amd64 (4.0.0+dfsg-2) ... Setting up ampliconnoise (1.29-10+b2) ... Setting up libqt5widgets5:amd64 (5.15.8+dfsg-11) ... Setting up libgtkglext1:amd64 (1.2.0-11) ... Setting up libfftw3-mpi3:amd64 (3.3.10-1) ... Setting up python3 (3.11.2-1+b1) ... Setting up r-cran-setrng (2022.4-1-1) ... Setting up texlive-lang-greek (2022.20230122-1) ... Setting up python3-cigar (0.1.3-2) ... Setting up libhtml-format-perl (2.16-2) ... Setting up r-cran-packrat (0.9.0-2) ... Setting up hhsuite (3.3.0+ds-7+b2) ... Setting up r-cran-snow (1:0.4.4-2) ... Setting up python3-sortedcontainers (2.4.0-2) ... Setting up r-cran-sm (2.2-5.7.1-1) ... Setting up r-cran-truncdist (1.0-2-4) ... Setting up simkamin (1.5.3-7) ... Setting up r-cran-gtools (3.9.4-1) ... Setting up r-cran-mapdata (2.3.1-1) ... Setting up prinseq-lite (0.20.4-6) ... Setting up r-cran-collapse (1.9.2-1) ... Setting up libreadline-dev:amd64 (8.2-1.3) ... Setting up r-cran-kernlab (0.9-32-1) ... Setting up r-cran-energy (1.7-11-1) ... Setting up python3-distlib (0.3.6-1) ... Setting up python3-fusepy (3.0.1-2) ... Setting up python3-pandocfilters (1.5.0-1) ... Setting up python3-opengl (3.1.6+dfsg-3) ... Setting up libxmu-dev:amd64 (2:1.1.3-3) ... Setting up njplot (2.4-9) ... Setting up r-cran-bdsmatrix (1.3-6-1) ... Setting up r-cran-data.table (1.14.8+dfsg-1) ... Setting up r-cran-xopen (1.0.0-2) ... Setting up r-cran-glue (1.6.2-1) ... Setting up r-cran-foreign (0.8.84-1) ... Setting up r-cran-gam (1.22-1-1) ... Setting up libdata-uuid-libuuid-perl (0.05-5) ... Setting up r-cran-fracdiff (1.5-2-1) ... Setting up r-cran-bit (4.0.5-1) ... Setting up libgnustep-base-dev (1.28.1+really1.28.0-5) ... Setting up python3-markupsafe (2.1.2-1+b1) ... Setting up libfltk-images1.3:amd64 (1.3.8-5) ... Setting up r-cran-xtable (1:1.8-4-2) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up iqtree (2.0.7+dfsg-1) ... Setting up r-cran-polyclip (1.10-4-1) ... Setting up libtest-files-perl (0.15-1) ... Setting up libqt5help5:amd64 (5.15.8-2) ... Setting up r-cran-cli (3.6.0-1) ... Setting up python3-webencodings (0.5.1-5) ... Setting up libqt5charts5:amd64 (5.15.8-2) ... Setting up r-cran-rbibutils (2.2.13-1) ... Setting up r-cran-lifecycle (1.0.3+dfsg-1) ... Setting up r-cran-dotcall64 (1.0-2-1) ... Setting up libgdal32 (3.6.2+dfsg-1+b2) ... Setting up r-cran-bitops (1.0-7-1) ... Setting up r-cran-httpcode (0.3.0-2) ... Setting up mmb (4.0.0+dfsg-2) ... Setting up python3-ujson:amd64 (5.7.0-1) ... Setting up python3-sbml5 (5.19.7+dfsg-2) ... Setting up r-bioc-biocversion (3.16.0-1) ... Setting up flye (2.9.1+dfsg-1) ... Setting up python3-platformdirs (2.6.0-1) ... Setting up python3-psutil (5.9.4-1+b1) ... Setting up r-cran-rprojroot (2.0.3-1) ... Setting up python3-multidict (6.0.4-1+b1) ... Setting up r-cran-fnn (1.1.3.1-1) ... Setting up r-cran-mlbench (2.1-3-1) ... Setting up r-cran-bit64 (4.0.5-1) ... Setting up python3-tz (2022.7.1-4) ... Setting up libatk-wrapper-java-jni:amd64 (0.40.0-3) ... Setting up r-cran-biocmanager (1.30.20+dfsg-1) ... Setting up libqt5waylandclient5:amd64 (5.15.8-2) ... Setting up r-cran-progressr (0.13.0-1) ... Setting up r-cran-dichromat (1:2.0-0.1-1) ... Setting up libgl2ps1.4 (1.4.2+dfsg1-2) ... Setting up python3-natsort (8.0.2-2) ... Setting up libqt5multimedia5:amd64 (5.15.8-2) ... Setting up last-align (1447-1+b1) ... Setting up r-cran-robumeta (2.0-3) ... Setting up r-cran-deldir (1.0-6-1+b1) ... Setting up libqt6widgets6:amd64 (6.4.2+dfsg-10) ... Setting up python3-cloudpickle (2.2.0-1) ... Setting up python3-frozenlist (1.3.3-1+b1) ... Setting up bowtie2 (2.5.0-3+b2) ... Setting up python3-aiosignal (1.3.1-1) ... Setting up python3-uritemplate (4.1.1-2) ... Setting up libblasr5.3.5:amd64 (5.3.5+dfsg-4+b2) ... Setting up r-cran-goftest (1.2-3-1+b1) ... Setting up r-cran-randomforest (4.7-1.1-1) ... Setting up r-cran-ellipse (0.4.3-1) ... Setting up bali-phy (3.6.1+dfsg-1) ... Setting up libavfilter8:amd64 (7:5.1.4-0+deb12u1) ... Setting up libnuma-dev:amd64 (2.0.16-1) ... Setting up python3-ratelimiter (1.2.0.post0-4) ... Setting up r-cran-admisc (0.30-1) ... Setting up r-cran-shape (1.4.6-1) ... Setting up python3-blosc (1.11.1+ds1-1+b1) ... Setting up python3-prefixed (0.7.0-1) ... Setting up python3-async-timeout (4.0.2-1) ... Setting up r-cran-askpass (1.1-2) ... Setting up ncbi-blast+ (2.12.0+ds-3+b1) ... Setting up r-cran-fastmap (1.1.1-1) ... Setting up r-cran-png (0.1-8-1) ... Setting up python3-six (1.16.0-4) ... Setting up python3-bson (3.11.0-1+b5) ... Setting up r-cran-av (0.8.3+dfsg-1) ... Setting up python3-simplejson (3.18.3-1) ... Setting up dh-autoreconf (20) ... Setting up libbio-tools-run-alignment-clustalw-perl (1.7.4-3) ... Setting up libqt5printsupport5:amd64 (5.15.8+dfsg-11) ... Setting up r-cran-sodium (1.2.1+dfsg-1) ... Setting up r-cran-r.methodss3 (1.8.2-1) ... Setting up python3-progressbar (2.5-3) ... Setting up r-bioc-biobase (2.58.0-2) ... Setting up r-cran-jsonlite (1.8.4+dfsg-1) ... Setting up r-cran-mnormt (2.1.1-2) ... Setting up python3-isodate (0.6.1-1) ... Setting up libqt6svg6:amd64 (6.4.2-2) ... Setting up python3-pil:amd64 (9.4.0-1.1+b1) ... Setting up libodsstream0:amd64 (0.9.1-2) ... Setting up r-cran-corrplot (0.92-1) ... Setting up libjson-maybexs-perl (1.004004-1) ... Setting up r-cran-rnetcdf (2.6-2-1) ... Setting up r-cran-rstudioapi (0.14-1) ... Setting up r-cran-rose (0.0-4-2) ... Setting up r-cran-pkgconfig (2.0.3-2) ... Setting up python3-llvmlite (0.39.1-2) ... Setting up libpicard-java (2.27.5+dfsg-2) ... Setting up python3-roman (3.3-3) ... Setting up r-cran-mapproj (1.2.11-1) ... Setting up r-cran-getopt (1.20.3-3) ... Setting up libbio-tools-run-alignment-tcoffee-perl (1.7.4-3) ... Setting up python3-decorator (5.1.1-3) ... Setting up gfortran-12 (12.2.0-14) ... Setting up python3-jinja2 (3.1.2-1) ... Setting up python3-pygtrie (2.2-2) ... Setting up r-cran-linprog (0.9-4-1) ... Setting up libxml2-dev:amd64 (2.9.14+dfsg-1.3~deb12u1) ... Setting up python3-pycurl (7.45.2-3) ... Setting up r-cran-sp (1:1.6-0+dfsg-1) ... Setting up python3-corepywrap (1.005-11+b1) ... Setting up r-cran-rwave (2.6-5-1) ... Setting up r-cran-utf8 (1.2.3-1) ... Setting up python3-webcolors (1.11.1-1) ... Setting up libgstreamer-gl1.0-0:amd64 (1.22.0-3+deb12u1) ... Setting up r-cran-brew (1.0-8-1) ... Setting up python3-packaging (23.0-1) ... Setting up tophat-recondition (1.4-3) ... Setting up gdb (13.1-3) ... 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Setting up libclass-c3-componentised-perl (1.001002-2) ... Setting up python3-tinyalign (0.2.1-1+b3) ... Setting up python3-certifi (2022.9.24-1) ... Setting up r-cran-swagger (3.33.1-1) ... Setting up r-cran-markdown (1.5+dfsg-1) ... Setting up r-cran-gitcreds (0.1.2-1) ... Setting up r-cran-stringdist (0.9.10-1) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-2) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libmailtools-perl (2.21-2) ... Setting up libcgi-session-perl (4.48-4) ... Setting up r-cran-plotrix (3.8-2-1) ... Setting up r-cran-expint (0.1-8-1) ... Setting up python3-snowballstemmer (2.2.0-2) ... Setting up ataqv (1.3.0+ds-2) ... Setting up python3-avro (1.11.1+dfsg-2) ... Setting up libblasr-dev:amd64 (5.3.5+dfsg-4+b2) ... Setting up python3-werkzeug (2.2.2-3) ... Setting up librdf0:amd64 (1.0.17-3) ... Setting up libgenometools0-dev (1.6.2+ds-3) ... Setting up r-cran-cpp11 (0.4.3-1) ... Setting up r-cran-mvtnorm (1.1-3-1+b1) ... Setting up r-cran-optimx (2022-4.30+dfsg-1) ... Setting up uuid-dev:amd64 (2.38.1-5+b1) ... Setting up r-cran-sitmo (2.0.2-1+b1) ... Setting up python3-jmespath (1.0.1-1) ... Setting up r-cran-segmented (1.6-2-1) ... Setting up r-cran-plyr (1.8.8-1) ... Setting up libbpp-qt2:amd64 (2.4.1-8) ... Setting up r-cran-rcolorbrewer (1.1-3-1) ... Setting up python3-nest-asyncio (1.5.4-1) ... Setting up python3-dill (0.3.6-1) ... Setting up python3-brotli (1.0.9-2+b6) ... Setting up libbiococoa-dev (2.2.2-6) ... Setting up r-cran-ini (0.3.1-2) ... Setting up r-bioc-s4vectors (0.36.1-1) ... Setting up libtrilinos-epetra-13.2:amd64 (13.2.0-4) ... Setting up r-cran-isoband (0.2.7-1) ... Setting up r-cran-runit (0.4.32-3) ... Setting up python3-multisplitby (0.0.1-6) ... Setting up libopencv-flann406:amd64 (4.6.0+dfsg-12) ... Setting up python3-mdurl (0.1.2-1) ... Setting up r-cran-futile.logger (1.4.3-4) ... Setting up python3-gi (3.42.2-3+b1) ... Setting up libmrm4:amd64 (2.3.8-3) ... Setting up r-cran-ucminf (1.1-4.1-1) ... Setting up texlive-latex-recommended (2022.20230122-3) ... Setting up python3-rfc3987 (1.3.8-2) ... Setting up python3-greenlet (2.0.2-1) ... Setting up r-cran-scatterplot3d (0.3-42-1) ... Setting up python3-cycler (0.11.0-1) ... Setting up python3-reportlab-accel:amd64 (3.6.12-1+b1) ... Setting up r-cran-teachingdemos (2.12-2) ... Setting up r-cran-gridextra (2.3-3) ... Setting up dnarrange (1.5.3-1) ... Setting up python3-connection-pool (0.0.3-2) ... Setting up python3-bytecode (0.14.0-2) ... Setting up libsc7v5 (2.3.1-22) ... Setting up dotter (4.44.1+dfsg-7+b2) ... Setting up r-bioc-limma (3.54.1+dfsg-1) ... Setting up sfftw-dev (2.1.5-6) ... Setting up python3-kiwisolver (1.4.4-1+b1) ... Setting up python3-bson-ext (3.11.0-1+b5) ... Setting up tvc (5.0.3+git20151221.80e144e+dfsg-5) ... Setting up phyx (1.3+ds-2) ... Setting up libglu1-mesa-dev:amd64 (9.0.2-1.1) ... Setting up libpbseq:amd64 (5.3.5+dfsg-4+b2) ... Setting up r-bioc-hilbertvis (1.56.0-1) ... Setting up python3-setproctitle:amd64 (1.3.1-1+b2) ... Setting up python3-idna (3.3-1) ... Setting up libxml-filter-buffertext-perl (1.01-7) ... Setting up python3-wrapt (1.14.1-2+b2) ... Setting up python3-markdown (3.4.1-2) ... Setting up python3-throttler (1.2.2-2) ... Setting up r-cran-pscl (1.5.5-1+b1) ... Setting up libghmm1 (0.9~rc3-4) ... Setting up r-cran-rmysql (0.10.25-1) ... Setting up cython3 (0.29.32-2+b1) ... Setting up python3-h11 (0.14.0-1) ... Setting up r-cran-terra (1.7-3-1) ... Setting up libace-perl (1.92-11+b2) ... Setting up libclass-dbi-pager-perl (0.08-6) ... Setting up molequeue (0.9.0-1+b2) ... Setting up r-cran-zoo (1.8-11-1) ... Setting up r-cran-wavethresh (4.7.2-1) ... Setting up python3-freecontact (1.1-6+b4) ... Setting up r-cran-geosphere (1.5-18-1) ... Setting up r-cran-guerry (1.8.0-1) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up python3-typing-extensions (4.4.0-1) ... Setting up bppphyview (0.6.1-4) ... Setting up r-cran-units (0.8-1+dfsg-1) ... Setting up r-cran-later (1.3.0+dfsg-1+b1) ... Setting up r-cran-matrix (1.5-3-1) ... Setting up libclipper2:amd64 (2.1.20201109-1) ... Setting up r-cran-spatstat.sparse (3.0-0-1) ... Setting up r-cran-here (1.0.1-2) ... Setting up r-bioc-mergeomics (1.26.0-1) ... Setting up python3-asciitree (0.3.3-3) ... Setting up python3-regex (0.1.20221031-1+b1) ... Setting up python3-cpuinfo (5.0.0-5) ... Setting up r-cran-doparallel (1.0.17-1) ... Setting up python3-html5lib (1.1-3) ... Setting up r-cran-magic (1.6-1-1) ... Setting up libqt5multimediawidgets5:amd64 (5.15.8-2) ... Setting up python3-pickleshare (0.7.5-5) ... Setting up python3-toml (0.10.2-1) ... Setting up fastqtl (2.184+v7+dfsg-3) ... Setting up texlive-pictures (2022.20230122-3) ... Setting up genometools (1.6.2+ds-3) ... Setting up r-cran-urlchecker (1.0.1-2) ... Setting up imagemagick (8:6.9.11.60+dfsg-1.6) ... Setting up r-cran-tinytex (0.44-1) ... Setting up python3-isort (5.6.4-1) ... Setting up r-cran-irlba (2.3.5.1-1) ... Setting up python3-urllib3 (1.26.12-1) ... Setting up libqt6svgwidgets6:amd64 (6.4.2-2) ... Setting up python3-pluggy (1.0.0+repack-1) ... Setting up r-bioc-tximport (1.26.1+dfsg-1) ... Setting up python3-reportlab (3.6.12-1) ... Setting up python3-markdown-it (2.1.0-5) ... Setting up r-cran-urltools (1.7.3+dfsg-2) ... Setting up r-cran-apcluster (1.4.10-1) ... Setting up r-cran-kernsmooth (2.23-20-1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up r-cran-knitr (1.42+dfsg-1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up python3-fastjsonschema (2.16.3-2) ... Setting up r-cran-rcpptoml (0.2.2+dfsg-1) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up libhtml-tableextract-perl (2.15-2) ... Setting up python3-mistune0 (0.8.4-2) ... Setting up gdpc (2.2.5-15) ... Setting up python3-pyqt5.sip (12.11.1-1) ... Setting up bedops (2.4.41+dfsg-1) ... Setting up libgail18:amd64 (2.24.33-2) ... Setting up r-cran-cba (0.2-23-1) ... Setting up r-cran-blockmodeling (1.1.4-1) ... Setting up libvcflib1:amd64 (1.0.3+dfsg-2) ... Setting up python3-pubsub (4.0.3-7) ... Setting up r-cran-mgcv (1.8-41-1) ... Setting up idba (1.1.3-8) ... Setting up python3-pyrsistent:amd64 (0.18.1-1+b3) ... Setting up vdpau-driver-all:amd64 (1.5-2) ... Setting up libpdb-redo3 (3.0.5-2) ... Setting up r-cran-plotmo (3.6.2-1) ... Setting up r-bioc-dnacopy (1.72.3-1) ... Setting up belvu (4.44.1+dfsg-7+b2) ... Setting up hisat2 (2.2.1-4+b2) ... Setting up r-cran-robustbase (0.95-0-1) ... Setting up r-cran-rpostgresql (0.7-5+dfsg-1) ... Setting up libhttp-daemon-perl (6.16-1) ... Setting up r-cran-metadat (1.2-0-2) ... Setting up libuil4:amd64 (2.3.8-3) ... Setting up libqt5opengl5:amd64 (5.15.8+dfsg-11) ... Setting up r-cran-xslt (1.4.4-1) ... Setting up libtrilinos-aztecoo-13.2:amd64 (13.2.0-4) ... Setting up r-cran-domc (1.3.8-1) ... Setting up libbioparser-dev (3.0.15-3) ... Setting up python3-json-pointer (2.3-2) ... Setting up libgtk2.0-bin (2.24.33-2) ... Setting up python3-lxml:amd64 (4.9.2-1+b1) ... Setting up r-cran-lobstr (1.1.2-1) ... Setting up python3-pygraphviz (1.7-3+b4) ... Setting up clustalx (2.1+lgpl-9) ... Setting up libghemical5v5 (3.0.0-4.3) ... Setting up python3-traitlets (5.5.0-1) ... Setting up python3-portalocker (2.2.1-1) ... Setting up python3-scitrack (2021.5.3-3) ... Setting up r-cran-powerlaw (0.70.6-2) ... Setting up r-cran-cachem (1.0.7-1) ... Setting up r-bioc-wrench (1.16.0+dfsg-1) ... Setting up libdata-section-perl (0.200008-1) ... Setting up r-cran-lmtest (0.9.40-1) ... Setting up libncurses5-dev:amd64 (6.4-4) ... Setting up apbs (3.4.1-5) ... Setting up rsem (1.3.3+dfsg-2+b1) ... Setting up texlive-fonts-recommended (2022.20230122-3) ... Setting up r-cran-tfmpvalue (0.0.9-1) ... Setting up python3-et-xmlfile (1.0.1-2.1) ... Setting up r-cran-rcpproll (0.3.0-2) ... Setting up python3-pyasn1 (0.4.8-3) ... Setting up r-bioc-biocbaseutils (1.0.0+dfsg-2) ... Setting up sprai (0.9.9.23+dfsg1-2) ... Setting up r-bioc-preprocesscore (1.60.2+ds-1) ... Setting up discosnp (1:2.6.2-2) ... Setting up python3-toolz (0.12.0-1) ... Setting up r-cran-bbmle (1.0.25-2) ... Setting up r-cran-catools (1.18.2-1+b1) ... Setting up uil (2.3.8-3) ... Setting up python3-dateutil (2.8.2-2) ... Setting up r-cran-rtsne (0.16-1) ... Setting up python3-mccabe (0.7.0-1) ... Setting up libncbi-vdb-dev:amd64 (3.0.2+dfsg-2) ... Setting up python3-py2bit (0.3.1-1+b2) ... Setting up r-cran-rcpparmadillo (0.12.0.1.0-1) ... Setting up python3-msgpack (1.0.3-2+b1) ... Setting up libhwloc-dev:amd64 (2.9.0-1) ... Setting up libopencv-imgproc406:amd64 (4.6.0+dfsg-12) ... Setting up r-cran-pcapp (2.0-3-1) ... Setting up r-cran-hdf5r (1.3.8+dfsg-1) ... Setting up r-bioc-iranges (2.32.0-1) ... Setting up r-cran-clustergeneration (1.3.7-1) ... Setting up tipa (2:1.3-21) ... Setting up python3-datrie:amd64 (0.8.2-4+b1) ... Setting up python3-shellescape (3.4.1-5) ... Setting up r-cran-cvst (0.2-3-1) ... Setting up python3-multiprocess (0.70.12.2-1) ... Setting up r-cran-rjson (0.2.21-1) ... Setting up python3-lazy-object-proxy (1.9.0-1+b1) ... Setting up libgromacs7:amd64 (2022.5-2) ... Setting up swi-prolog (9.0.4+dfsg-2) ... Setting up libgles-dev:amd64 (1.6.0-1) ... Setting up r-cran-tzdb (0.3.0-1) ... Setting up r-cran-reticulate (1.28+dfsg-1) ... Setting up r-cran-statnet.common (4.8.0-1) ... Setting up python3-protobuf (3.21.12-3) ... Setting up python3-mpmath (1.2.1-2) ... Setting up python3-diskcache (5.4.0-1) ... Setting up r-cran-calibrate (1.7.7-1) ... Setting up libhttp-entity-parser-perl (0.25-2) ... Setting up python3-argcomplete (2.0.0-1) ... Setting up fftw-dev (2.1.5-6) ... Setting up r-cran-globals (0.16.2-1) ... Setting up python3-pymongo (3.11.0-1+b5) ... Setting up libbio-tools-phylo-paml-perl (1.7.3-4) ... Setting up python3-prettytable (3.6.0-1) ... Setting up tk (8.6.13) ... Setting up r-cran-rcurl (1.98-1.10+dfsg-1) ... Setting up python3-tomlkit (0.11.7-1) ... Setting up abpoa (1.4.1-3+b4) ... Setting up python3-pathspec (0.11.0-1) ... Setting up libqt5quick5:amd64 (5.15.8+dfsg-3) ... Setting up r-cran-sessioninfo (1.2.2-1) ... Setting up r-bioc-seqlogo (1.64.0+dfsg-1) ... Setting up r-cran-metafor (3.8-1-1) ... Setting up python3-lib2to3 (3.11.2-3) ... Setting up python3-coloredlogs (15.0.1-1) ... Setting up python3-locket (1.0.0-1) ... Setting up r-cran-maptools (1:1.1-6+dfsg-1) ... Setting up libopencv-dnn406:amd64 (4.6.0+dfsg-12) ... Setting up python3-appdirs (1.4.4-3) ... Setting up python3-pymongo-ext (3.11.0-1+b5) ... Setting up python3-yarl (1.8.2-1+b1) ... Setting up python3-smmap (5.0.0-1) ... Setting up r-cran-spam (2.9-1-1) ... Setting up python3-mistune (2.0.4-1) ... Setting up r-cran-restfulr (0.0.15-1) ... Setting up python3-swiglpk (4.65.1-1+b4) ... Setting up gstreamer1.0-libav:amd64 (1.22.0-2) ... Setting up ncbi-cn3d (3.0.20170106+dfsg1-10) ... update-alternatives: using /usr/bin/Cn3D-3.0 to provide /usr/bin/Cn3D (Cn3D) in auto mode Setting up python3-soupsieve (2.3.2-1) ... Setting up r-bioc-sparsematrixstats (1.10.0+dfsg-1) ... Setting up r-cran-optparse (1.7.3-1) ... Setting up python3-websocket (1.2.3-1) ... Setting up ecopcr (1.0.1+dfsg-4) ... Setting up r-cran-gdata (2.18.0.1-1) ... Setting up proteinortho (6.1.7+dfsg-1) ... Setting up r-cran-conditionz (0.1.0-2) ... Setting up python3-deprecated (1.2.13-3) ... Setting up r-cran-rcppgsl (0.3.13-1) ... Setting up r-cran-distory (1.4.4-1+b1) ... Setting up r-cran-vctrs (0.5.2-1) ... Setting up r-cran-webutils (1.1-1+b1) ... Setting up libtrilinos-triutils-13.2:amd64 (13.2.0-4) ... Setting up libplack-perl (1.0050-1) ... Setting up libpmix-dev:amd64 (4.2.2-1+deb12u1) ... Setting up openmpi-bin (4.1.4-3+b1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python3-ngs (3.0.3+dfsg-6~deb12u1) ... Setting up libgtk-3-common (3.24.38-2~deb12u1) ... Setting up python3-pybind11 (2.10.3-1) ... Setting up python3-lzo:amd64 (1.14-1+b3) ... Setting up phyml (3:3.3.20220408-3) ... Setting up r-cran-polycor (0.8-1-1) ... Setting up python3-asgiref (3.6.0-1) ... Setting up r-cran-lamw (2.1.1-2) ... Setting up r-bioc-delayedarray (0.24.0+dfsg-1) ... Setting up python3-cffi-backend:amd64 (1.15.1-5+b1) ... Setting up r-cran-rcppeigen (0.3.3.9.3-1) ... Setting up python3-edlib:amd64 (1.2.7-4+b1) ... Setting up seaview (1:5.0.5-2) ... Setting up salmid (0.1.23-5) ... Setting up libhdf5-openmpi-103-1:amd64 (1.10.8+repack1-1) ... Setting up python3-imagesize (1.4.1-1) ... Setting up r-cran-hunspell (3.0.2+dfsg-1) ... Setting up python3-cytoolz (0.12.0-1+b1) ... Setting up python3-ptyprocess (0.7.0-5) ... Setting up python3-yapsy (1.12.0-1.3) ... Setting up g++-12 (12.2.0-14) ... Setting up python3-irodsclient (0.8.1-3) ... Setting up python3-blinker (1.5-1) ... Setting up libgs10:amd64 (10.0.0~dfsg-11+deb12u3) ... Setting up r-cran-pillar (1.8.1+dfsg-1) ... Setting up python3-dotenv (0.21.0-1) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-entrypoints (0.4-2) ... Setting up python3-prompt-toolkit (3.0.36-2) ... Setting up python3-distutils (3.11.2-3) ... Setting up python3-ruffus (2.8.4-5) ... Setting up transdecoder (5.0.1-5) ... Setting up libopencv-highgui406:amd64 (4.6.0+dfsg-12) ... Setting up python3-toposort (1.9-1) ... Setting up sibelia (3.0.7+dfsg-3) ... Setting up python3-geneimpacts (0.3.7-4) ... Setting up gstreamer1.0-gl:amd64 (1.22.0-3+deb12u1) ... Setting up ncbi-blast+-legacy (2.12.0+ds-3) ... Setting up density-fitness (1.0.8-4) ... Setting up python3-partd (1.3.0-1) ... Setting up gsettings-desktop-schemas (43.0-1) ... Setting up python3-more-itertools (8.10.0-2) ... Setting up python3-schedule (1.1.0-0.2) ... Setting up python3-elasticsearch (7.17.6-1) ... Setting up python3-heapdict (1.0.1-2) ... Setting up libqt5quickshapes5:amd64 (5.15.8+dfsg-3) ... Setting up r-cran-fontquiver (0.2.1-3) ... Setting up python3-configargparse (1.5.3-1) ... Setting up python3-arcp (0.2.1-6) ... Setting up python3-pyfaidx (0.7.1-2) ... Setting up r-cran-ellipsis (0.3.2-2) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sniffio (1.2.0-1) ... Setting up r-cran-rcppannoy (0.0.20-1) ... Setting up python3-sympy (1.11.1-1) ... Setting up centrifuge (1.0.3-11) ... Setting up placnet (1.04-1) ... Setting up r-cran-minqa (1.2.5-1) ... Setting up r-cran-filehash (2.4-5-1) ... Setting up r-cran-rngtools (1.5.2-1) ... Setting up python3-antlr4 (4.9.1-1) ... Setting up python3-attr (22.2.0-1) ... Setting up python3-lockfile (1:0.12.2-2.2) ... Setting up python3-tornado (6.2.0-3) ... Setting up libxml-sax-writer-perl (0.57-2) ... Setting up python3-argh (0.26.2-2) ... Setting up r-cran-ratelimitr (0.4.1-2) ... Setting up r-cran-reshape (0.8.9-1) ... Setting up libsvg-graph-perl (0.02-4) ... Setting up r-cran-openssl (2.0.5+dfsg-1) ... Setting up gedit-common (44.2-1) ... Setting up r-cran-actuar (3.3-2-1) ... Setting up kraken2 (2.1.2-2) ... Setting up nanopolish (0.14.0-1) ... Setting up r-cran-libcoin (1.0-9-1+b1) ... Setting up python3-pairix:amd64 (0.3.7-6+b1) ... Setting up r-cran-fauxpas (0.5.0+dfsg-2) ... Setting up nxtrim (0.4.3+dfsg-3) ... Setting up metaphlan2-data (2.6.0+ds-4) ... Settings: Output files: "/usr/share/metaphlan2/db_v20/mpa_v20_m200.*.bt2" Line rate: 6 (line is 64 bytes) Lines per side: 1 (side is 64 bytes) Offset rate: 4 (one in 16) FTable chars: 10 Strings: unpacked Max bucket size: default Max bucket size, sqrt multiplier: default Max bucket size, len divisor: 4 Difference-cover sample period: 1024 Endianness: little Actual local endianness: little Sanity checking: disabled Assertions: disabled Random seed: 0 Sizeofs: void*:8, int:4, long:8, size_t:8 Input files DNA, FASTA: /var/lib/metaphlan2-data/markers.fasta Building a SMALL index Reading reference sizes Time reading reference sizes: 00:00:19 Calculating joined length Writing header Reserving space for joined string Joining reference sequences Time to join reference sequences: 00:00:05 bmax according to bmaxDivN setting: 177889396 Using parameters --bmax 133417047 --dcv 1024 Doing ahead-of-time memory usage test Passed! Constructing with these parameters: --bmax 133417047 --dcv 1024 Constructing suffix-array element generator Building DifferenceCoverSample Building sPrime Building sPrimeOrder V-Sorting samples V-Sorting samples time: 00:00:13 Allocating rank array Ranking v-sort output Ranking v-sort output time: 00:00:07 Invoking Larsson-Sadakane on ranks Invoking Larsson-Sadakane on ranks time: 00:00:08 Sanity-checking and returning Building samples Reserving space for 12 sample suffixes Generating random suffixes QSorting 12 sample offsets, eliminating duplicates QSorting sample offsets, eliminating duplicates time: 00:00:00 Multikey QSorting 12 samples (Using difference cover) Multikey QSorting samples time: 00:00:00 Calculating bucket sizes Splitting and merging Splitting and merging time: 00:00:00 Split 1, merged 7; iterating... Splitting and merging Splitting and merging time: 00:00:00 Split 1, merged 1; iterating... Splitting and merging Splitting and merging time: 00:00:00 Split 1, merged 0; iterating... Splitting and merging Splitting and merging time: 00:00:00 Avg bucket size: 1.01651e+08 (target: 133417046) Converting suffix-array elements to index image Allocating ftab, absorbFtab Entering Ebwt loop Getting block 1 of 7 Reserving size (133417047) for bucket 1 Calculating Z arrays for bucket 1 Entering block accumulator loop for bucket 1: bucket 1: 10% bucket 1: 20% bucket 1: 30% bucket 1: 40% bucket 1: 50% bucket 1: 60% bucket 1: 70% bucket 1: 80% bucket 1: 90% bucket 1: 100% Sorting block of length 73481450 for bucket 1 (Using difference cover) Sorting block time: 00:00:20 Returning block of 73481451 for bucket 1 Getting block 2 of 7 Reserving size (133417047) for bucket 2 Calculating Z arrays for bucket 2 Entering block accumulator loop for bucket 2: bucket 2: 10% bucket 2: 20% bucket 2: 30% bucket 2: 40% bucket 2: 50% bucket 2: 60% bucket 2: 70% bucket 2: 80% bucket 2: 90% bucket 2: 100% Sorting block of length 112624089 for bucket 2 (Using difference cover) Sorting block time: 00:00:29 Returning block of 112624090 for bucket 2 Getting block 3 of 7 Reserving size (133417047) for bucket 3 Calculating Z arrays for bucket 3 Entering block accumulator loop for bucket 3: bucket 3: 10% bucket 3: 20% bucket 3: 30% bucket 3: 40% bucket 3: 50% bucket 3: 60% bucket 3: 70% bucket 3: 80% bucket 3: 90% bucket 3: 100% Sorting block of length 114872559 for bucket 3 (Using difference cover) Sorting block time: 00:00:29 Returning block of 114872560 for bucket 3 Getting block 4 of 7 Reserving size (133417047) for bucket 4 Calculating Z arrays for bucket 4 Entering block accumulator loop for bucket 4: bucket 4: 10% bucket 4: 20% bucket 4: 30% bucket 4: 40% bucket 4: 50% bucket 4: 60% bucket 4: 70% bucket 4: 80% bucket 4: 90% bucket 4: 100% Sorting block of length 96915131 for bucket 4 (Using difference cover) Sorting block time: 00:00:24 Returning block of 96915132 for bucket 4 Getting block 5 of 7 Reserving size (133417047) for bucket 5 Calculating Z arrays for bucket 5 Entering block accumulator loop for bucket 5: bucket 5: 10% bucket 5: 20% bucket 5: 30% bucket 5: 40% bucket 5: 50% bucket 5: 60% bucket 5: 70% bucket 5: 80% bucket 5: 90% bucket 5: 100% Sorting block of length 110535719 for bucket 5 (Using difference cover) Sorting block time: 00:00:29 Returning block of 110535720 for bucket 5 Getting block 6 of 7 Reserving size (133417047) for bucket 6 Calculating Z arrays for bucket 6 Entering block accumulator loop for bucket 6: bucket 6: 10% bucket 6: 20% bucket 6: 30% bucket 6: 40% bucket 6: 50% bucket 6: 60% bucket 6: 70% bucket 6: 80% bucket 6: 90% bucket 6: 100% Sorting block of length 79173124 for bucket 6 (Using difference cover) Sorting block time: 00:00:21 Returning block of 79173125 for bucket 6 Getting block 7 of 7 Reserving size (133417047) for bucket 7 Calculating Z arrays for bucket 7 Entering block accumulator loop for bucket 7: bucket 7: 10% bucket 7: 20% bucket 7: 30% bucket 7: 40% bucket 7: 50% bucket 7: 60% bucket 7: 70% bucket 7: 80% bucket 7: 90% bucket 7: 100% Sorting block of length 123955509 for bucket 7 (Using difference cover) Sorting block time: 00:00:36 Returning block of 123955510 for bucket 7 Exited Ebwt loop fchr[A]: 0 fchr[C]: 193247476 fchr[G]: 355349181 fchr[T]: 534730948 fchr[$]: 711557587 Exiting Ebwt::buildToDisk() Returning from initFromVector Wrote 304203219 bytes to primary EBWT file: /usr/share/metaphlan2/db_v20/mpa_v20_m200.1.bt2.tmp Wrote 177889404 bytes to secondary EBWT file: /usr/share/metaphlan2/db_v20/mpa_v20_m200.2.bt2.tmp Re-opening _in1 and _in2 as input streams Returning from Ebwt constructor Headers: len: 711557587 bwtLen: 711557588 sz: 177889397 bwtSz: 177889397 lineRate: 6 offRate: 4 offMask: 0xfffffff0 ftabChars: 10 eftabLen: 20 eftabSz: 80 ftabLen: 1048577 ftabSz: 4194308 offsLen: 44472350 offsSz: 177889400 lineSz: 64 sideSz: 64 sideBwtSz: 48 sideBwtLen: 192 numSides: 3706030 numLines: 3706030 ebwtTotLen: 237185920 ebwtTotSz: 237185920 color: 0 reverse: 0 Total time for call to driver() for forward index: 00:08:34 Reading reference sizes Time reading reference sizes: 00:00:03 Calculating joined length Writing header Reserving space for joined string Joining reference sequences Time to join reference sequences: 00:00:04 Time to reverse reference sequence: 00:00:01 bmax according to bmaxDivN setting: 177889396 Using parameters --bmax 133417047 --dcv 1024 Doing ahead-of-time memory usage test Passed! Constructing with these parameters: --bmax 133417047 --dcv 1024 Constructing suffix-array element generator Building DifferenceCoverSample Building sPrime Building sPrimeOrder V-Sorting samples V-Sorting samples time: 00:00:12 Allocating rank array Ranking v-sort output Ranking v-sort output time: 00:00:05 Invoking Larsson-Sadakane on ranks Invoking Larsson-Sadakane on ranks time: 00:00:08 Sanity-checking and returning Building samples Reserving space for 12 sample suffixes Generating random suffixes QSorting 12 sample offsets, eliminating duplicates QSorting sample offsets, eliminating duplicates time: 00:00:00 Multikey QSorting 12 samples (Using difference cover) Multikey QSorting samples time: 00:00:00 Calculating bucket sizes Splitting and merging Splitting and merging time: 00:00:00 Split 1, merged 6; iterating... Splitting and merging Splitting and merging time: 00:00:00 Avg bucket size: 1.01651e+08 (target: 133417046) Converting suffix-array elements to index image Allocating ftab, absorbFtab Entering Ebwt loop Getting block 1 of 7 Reserving size (133417047) for bucket 1 Calculating Z arrays for bucket 1 Entering block accumulator loop for bucket 1: bucket 1: 10% bucket 1: 20% bucket 1: 30% bucket 1: 40% bucket 1: 50% bucket 1: 60% bucket 1: 70% bucket 1: 80% bucket 1: 90% bucket 1: 100% Sorting block of length 91718666 for bucket 1 (Using difference cover) Sorting block time: 00:00:22 Returning block of 91718667 for bucket 1 Getting block 2 of 7 Reserving size (133417047) for bucket 2 Calculating Z arrays for bucket 2 Entering block accumulator loop for bucket 2: bucket 2: 10% bucket 2: 20% bucket 2: 30% bucket 2: 40% bucket 2: 50% bucket 2: 60% bucket 2: 70% bucket 2: 80% bucket 2: 90% bucket 2: 100% Sorting block of length 107401525 for bucket 2 (Using difference cover) Sorting block time: 00:00:30 Returning block of 107401526 for bucket 2 Getting block 3 of 7 Reserving size (133417047) for bucket 3 Calculating Z arrays for bucket 3 Entering block accumulator loop for bucket 3: bucket 3: 10% bucket 3: 20% bucket 3: 30% bucket 3: 40% bucket 3: 50% bucket 3: 60% bucket 3: 70% bucket 3: 80% bucket 3: 90% bucket 3: 100% Sorting block of length 113723363 for bucket 3 (Using difference cover) Sorting block time: 00:00:27 Returning block of 113723364 for bucket 3 Getting block 4 of 7 Reserving size (133417047) for bucket 4 Calculating Z arrays for bucket 4 Entering block accumulator loop for bucket 4: bucket 4: 10% bucket 4: 20% bucket 4: 30% bucket 4: 40% bucket 4: 50% bucket 4: 60% bucket 4: 70% bucket 4: 80% bucket 4: 90% bucket 4: 100% Sorting block of length 95758918 for bucket 4 (Using difference cover) Sorting block time: 00:00:23 Returning block of 95758919 for bucket 4 Getting block 5 of 7 Reserving size (133417047) for bucket 5 Calculating Z arrays for bucket 5 Entering block accumulator loop for bucket 5: bucket 5: 10% bucket 5: 20% bucket 5: 30% bucket 5: 40% bucket 5: 50% bucket 5: 60% bucket 5: 70% bucket 5: 80% bucket 5: 90% bucket 5: 100% Sorting block of length 104659734 for bucket 5 (Using difference cover) Sorting block time: 00:00:25 Returning block of 104659735 for bucket 5 Getting block 6 of 7 Reserving size (133417047) for bucket 6 Calculating Z arrays for bucket 6 Entering block accumulator loop for bucket 6: bucket 6: 10% bucket 6: 20% bucket 6: 30% bucket 6: 40% bucket 6: 50% bucket 6: 60% bucket 6: 70% bucket 6: 80% bucket 6: 90% bucket 6: 100% Sorting block of length 116767199 for bucket 6 (Using difference cover) Sorting block time: 00:00:30 Returning block of 116767200 for bucket 6 Getting block 7 of 7 Reserving size (133417047) for bucket 7 Calculating Z arrays for bucket 7 Entering block accumulator loop for bucket 7: bucket 7: 10% bucket 7: 20% bucket 7: 30% bucket 7: 40% bucket 7: 50% bucket 7: 60% bucket 7: 70% bucket 7: 80% bucket 7: 90% bucket 7: 100% Sorting block of length 81528176 for bucket 7 (Using difference cover) Sorting block time: 00:00:22 Returning block of 81528177 for bucket 7 Exited Ebwt loop fchr[A]: 0 fchr[C]: 193247476 fchr[G]: 355349181 fchr[T]: 534730948 fchr[$]: 711557587 Exiting Ebwt::buildToDisk() Returning from initFromVector Wrote 304203219 bytes to primary EBWT file: /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.1.bt2.tmp Wrote 177889404 bytes to secondary EBWT file: /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.2.bt2.tmp Re-opening _in1 and _in2 as input streams Returning from Ebwt constructor Headers: len: 711557587 bwtLen: 711557588 sz: 177889397 bwtSz: 177889397 lineRate: 6 offRate: 4 offMask: 0xfffffff0 ftabChars: 10 eftabLen: 20 eftabSz: 80 ftabLen: 1048577 ftabSz: 4194308 offsLen: 44472350 offsSz: 177889400 lineSz: 64 sideSz: 64 sideBwtSz: 48 sideBwtLen: 192 numSides: 3706030 numLines: 3706030 ebwtTotLen: 237185920 ebwtTotSz: 237185920 color: 0 reverse: 1 Total time for backward call to driver() for mirror index: 00:07:23 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.3.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.3.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.4.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.4.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.1.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.1.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.2.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.2.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.1.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.1.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.2.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.2.bt2 Metaphlan2 data are properly created. Setting up ghmm (0.9~rc3-4) ... Setting up python3-pyspoa (0.0.8-3+b2) ... Setting up python3-pure-eval (0.2.2-1) ... Setting up r-cran-rversions (2.1.2-1) ... Setting up libqt5quicktest5:amd64 (5.15.8+dfsg-3) ... Setting up python3-send2trash (1.8.1~b0-2) ... Setting up libptscotch-7.0:amd64 (7.0.3-2) ... Setting up python3-filelock (3.9.0-1) ... Setting up python3-astunparse (1.6.3-2) ... Setting up libvulkan-dev:amd64 (1.3.239.0-1) ... Setting up libqt5positioningquick5:amd64 (5.15.8+dfsg-3+deb12u1) ... Setting up surankco (0.0.r5+dfsg-3) ... Setting up libqt6printsupport6:amd64 (6.4.2+dfsg-10) ... Setting up python3-ftputil (5.0.4-1) ... Setting up libboost1.74-dev:amd64 (1.74.0+ds1-21) ... Setting up python3-propka (3.5.0-1) ... Setting up gamgi (0.17.5-1) ... Setting up r-cran-misctools (0.6-26-2) ... Setting up libcombblas1.16.0:amd64 (1.6.2-8) ... Setting up python3-libarchive-c (2.9-0.1) ... Setting up python3-tinycss2 (1.2.1-2) ... Setting up python3-pysam (0.20.0+ds-3+b1) ... Setting up python3-fast5:amd64 (0.6.5-7+b3) ... Setting up libfml-dev:amd64 (0.1+git20190320.b499514-1+b1) ... Setting up python3-cairo:amd64 (1.20.1-5+b1) ... Setting up python3-renderpm:amd64 (3.6.12-1+b1) ... Setting up python3-gfapy (1.2.3+dfsg-2) ... Setting up blixem (4.44.1+dfsg-7+b2) ... Setting up r-cran-stringr (1.5.0-1) ... Setting up python3-hisat2 (2.2.1-4) ... Setting up r-cran-class (7.3-21-1) ... Setting up python3-setuptools (66.1.1-1) ... Setting up python3-distro (1.8.0-1) ... Setting up porechop (0.2.4+dfsg-4) ... Setting up libglade2-0:amd64 (1:2.6.4-2.4) ... Setting up python3-intervaltree (3.0.2-1.1) ... Setting up python3-screed (1.0.5-4) ... Setting up libqt5designer5:amd64 (5.15.8-2) ... Setting up python3-tblib (1.7.0-3) ... Setting up python3-openbabel (3.1.1+dfsg-9+b3) ... Setting up libqt5location5:amd64 (5.15.8+dfsg-3+deb12u1) ... Setting up bowtie (1.3.1-1+b1) ... Setting up python3-py (1.11.0-1) ... Setting up python3-jdcal (1.0-1.3) ... Setting up r-cran-modelmetrics (1.2.2.2-1+b1) ... Setting up ltrsift (1.0.2-9+b1) ... Setting up r-cran-googlevis (0.7.0+dfsg-1) ... Setting up r-cran-callr (3.7.3-2) ... Setting up python3-backcall (0.2.0-4) ... Setting up python3-anyio (3.6.2-1) ... Setting up ssake (4.0.1-1) ... Setting up cat-bat (5.2.3-2) ... Setting up python3-ijson (3.2.0-1) ... Setting up python3-joblib (1.2.0-4) ... Setting up python3-parso (0.8.3-1) ... Setting up r-cran-openxlsx (4.2.5.2-1) ... Setting up python3-jwt (2.6.0-1) ... Setting up python3-cvxopt (1.3.0+dfsg-1+b1) ... Setting up python3-cachetools (5.2.0-1) ... Setting up python3-pyabpoa (1.4.1-3+b4) ... Setting up python3-asteval (0.9.28-1) ... Setting up libmime-lite-perl (3.033-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up python3-babel (2.10.3-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-deeptoolsintervals (0.1.9-3+b6) ... Setting up python3-colorama (0.4.6-2) ... Setting up libbambamc-dev:amd64 (0.0.50-6+b1) ... Setting up python3-typechecks (0.1.0+ds-3) ... Setting up python3-memoized-property (1.0.3-2) ... Setting up libgail-common:amd64 (2.24.33-2) ... Setting up libsuperlu-dist8:amd64 (8.1.2+dfsg1-1+b1) ... Setting up python3-colorlog (6.7.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b2) ... Setting up python3-public (2.3-4) ... Setting up r-cran-selectr (0.4-2-2) ... Setting up libtest-most-perl (0.38-1) ... Setting up python3-zope.event (4.4-3) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-zope.interface (5.5.2-1+b1) ... Setting up python3-pbr (5.10.0-2) ... Setting up r-cran-genabel (1.8-0-6) ... Setting up libclass-accessor-grouped-perl (0.10014-2) ... Setting up python3-ipython-genutils (0.2.0-5) ... Setting up python3-pulp (2.6.0+dfsg-1) ... Setting up python3-pbsuite-utils (15.8.24+dfsg-7) ... Setting up python3-asttokens (2.2.1-1) ... Setting up libcgi-fast-perl (1:2.15-1) ... Setting up qtdeclarative5-dev-tools (5.15.8+dfsg-3) ... Setting up r-bioc-edger (3.40.2+dfsg-1) ... Setting up python3-pytz-deprecation-shim (0.1.0.post0-3) ... Setting up r-cran-matrixmodels (0.5-1-1) ... Setting up prime-phylo (1.0.11-10) ... Setting up python3-charset-normalizer (3.0.1-2) ... Setting up python3-pygit2 (1.11.1-3) ... Setting up libgtk-3-0:amd64 (3.24.38-2~deb12u1) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up python3-pika (1.2.0-1) ... Setting up r-bioc-biomformat (1.26.0+dfsg-1) ... Setting up python3-pytest (7.2.1-2) ... Setting up python3-alabaster (0.7.12-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up python3-pydot (1.4.2-1) ... Setting up r-cran-genetics (1.3.8.1.3-1) ... Setting up python3-mypy-extensions (0.4.3-4) ... Setting up r-cran-desc (1.4.2-1) ... Setting up libmoo-perl (2.005005-1) ... Setting up atropos (1.1.31+dfsg-3+b3) ... Setting up python3-olefile (0.46-3) ... Setting up python3-tenacity (8.2.1-1) ... Setting up r-cran-timeseries (4021.105-2) ... Setting up python3-bcrypt (3.2.2-1) ... Setting up python3-hypothesis (6.67.1-1) ... Setting up python3-fsspec (2022.11.0-1) ... Setting up python3-ply (3.11-5) ... Setting up python3-blessed (1.19.1-1) ... Setting up fastaq (3.17.0-5) ... Setting up python3-pyinotify (0.9.6-2) ... Setting up python3-tqdm (4.64.1-1) ... Setting up python3-tinydb (3.15.2-4) ... Setting up libseqan3-dev (3.2.0+ds-6) ... Setting up texlive-science (2022.20230122-4) ... Setting up libpng-dev:amd64 (1.6.39-2) ... Setting up r-cran-mda (0.5-3-1) ... Setting up libstaden-read-dev (1.14.15-1) ... Setting up fasta3 (36.3.8i.14-Nov-2020-1) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up libqt5svg5:amd64 (5.15.8-3) ... Setting up python3-ruamel.yaml.clib:amd64 (0.2.7-1+b2) ... Setting up r-cran-munsell (0.5.0-2) ... Setting up r-cran-tibble (3.1.8+dfsg-1) ... Setting up python3-pangolearn (2022-07-09+dfsg-2) ... Setting up python3-pyfastx (0.8.4-2) ... Setting up gir1.2-gtk-3.0:amd64 (3.24.38-2~deb12u1) ... Setting up libjpeg-dev:amd64 (1:2.1.5-2) ... Setting up dvisvgm (3.0.3-1) ... Setting up mpi-default-bin (1.14) ... Setting up python3-pdbx (2.0.1-2) ... Setting up relion (3.1.3-3+b1) ... Setting up isympy-common (1.11.1-1) ... Setting up python3-gast (0.5.2-2) ... Setting up r-cran-clock (0.6.1-2) ... Setting up r-cran-sandwich (3.0-2-1) ... Setting up python3-aiohttp (3.8.4-1) ... Setting up pizzly (0.37.3+ds-9) ... Setting up python3-marshmallow (3.18.0-1) ... Setting up r-bioc-delayedmatrixstats (1.20.0+ds-1) ... Setting up ncbi-tools-x11 (6.1.20170106+dfsg1-10) ... Setting up r-cran-proc (1.18.0-1+b1) ... Setting up libhts-dev:amd64 (1.16+ds-3) ... Setting up blasr (5.3.5+dfsg-6) ... Setting up r-cran-dorng (1.8.6-1) ... Setting up python3-tabulate (0.8.9-1) ... Setting up python3-virtualenv (20.17.1+ds-1) ... Setting up libdata-perl-perl (0.002011-2) ... Setting up libglvnd-dev:amd64 (1.6.0-1) ... Setting up libseqlib-dev:amd64 (1.2.0+dfsg-9) ... Setting up libpappsomspp0-qt6:amd64 (0.9.6-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up python3-itsdangerous (2.1.2-3) ... Setting up python3-all (3.11.2-1+b1) ... Setting up python3-coverage (6.5.0+dfsg1-2+b1) ... Setting up python3-yaml (6.0-3+b2) ... Setting up python3-tk:amd64 (3.11.2-3) ... Setting up r-cran-survival (3.5-3-1) ... Setting up debhelper (13.11.4) ... Setting up texlive-latex-extra (2022.20230122-4) ... Setting up python3-mappy (2.24+dfsg-3+b1) ... Setting up libgtk-3-bin (3.24.38-2~deb12u1) ... Setting up r-cran-igraph (1.3.5-3) ... Setting up python3-pytest-cov (4.0.0-1) ... Setting up r-cran-qqman (0.1.8+dfsg-1) ... Setting up kissplice (2.6.2-2) ... Setting up libopencv-imgcodecs406:amd64 (4.6.0+dfsg-12) ... Setting up r-cran-xts (0.13.0-1) ... Setting up r-bioc-dirichletmultinomial (1.40.0-1) ... Setting up r-cran-qpdf (1.3.0+dfsg-2) ... Setting up libmodule-runtime-conflicts-perl (0.003-2) ... Setting up python3-shasta (0.11.1-1+b1) ... Setting up libqscintilla2-qt5-15:amd64 (2.13.3+dfsg-3) ... Setting up libqt5webkit5:amd64 (5.212.0~alpha4-30) ... Setting up libavogadro2-1:amd64 (1.97.0-3+b1) ... Setting up r-bioc-biocio (1.8.0+dfsg-1) ... Setting up r-cran-expm (0.999-7-1) ... Setting up python3-gitdb (4.0.9-2) ... Setting up r-cran-r.oo (1.25.0-1) ... Setting up logol-bin (1.7.9+dfsg-6+b1) ... Setting up python3-uamqp (1.5.3-1+b4) ... Setting up python3-serializable (0.2.1+ds-2) ... Setting up python3-gevent (22.10.2-3) ... Setting up r-cran-rdpack (2.4-1) ... Setting up libsql-abstract-perl (2.000001-2) ... Setting up python3-zipp (1.0.0-6) ... Setting up python3-click (8.1.3-2) ... Setting up ghostscript (10.0.0~dfsg-11+deb12u3) ... Setting up libvte-2.91-0:amd64 (0.70.6-2~deb12u1) ... Setting up r-cran-tweenr (2.0.2-1) ... Setting up libtrilinos-zoltan-13.2:amd64 (13.2.0-4) ... Setting up r-cran-ade4 (1.7-22-1) ... Setting up libmime-tools-perl (5.510-1) ... Setting up python3-networkx (2.8.8-1) ... Setting up r-cran-future (1.31.0+dfsg-1) ... Setting up pyfastx (0.8.4-2) ... Setting up python3-nose (1.3.7-9) ... Setting up lamassemble (1.4.2-5) ... Setting up python3-wheel (0.38.4-2) ... Setting up gromacs (2022.5-2) ... Setting up qt5-gtk-platformtheme:amd64 (5.15.8+dfsg-11) ... Setting up r-bioc-pcamethods (1.90.0-1) ... Setting up libamtk-5-0:amd64 (5.6.1-2) ... Setting up gfortran (4:12.2.0-3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up python3-ldap3 (2.9.1-2) ... Setting up bamkit (0.0.1+git20170413.ccd079d-3) ... Setting up r-cran-forcats (1.0.0-1) ... Setting up python3-simpleeval (0.9.12-1) ... Setting up libsoftware-license-perl (0.104002-1) ... Setting up libclass-load-perl (0.25-2) ... Setting up libclipper-dev:amd64 (2.1.20201109-1) ... Setting up r-cran-geometry (0.4.7-1) ... Setting up chimeraslayer (20101212+dfsg1-5) ... Setting up python3-bs4 (4.11.2-2) ... Setting up r-cran-bench (1.1.2-1+b1) ... Setting up python3-sqlalchemy (1.4.46+ds1-1) ... Setting up r-bioc-zlibbioc (1.44.0+dfsg-1) ... Setting up r-cran-network (1.18.1-1) ... Setting up r-cran-strucchange (1.5-3-1) ... Setting up sniffles (2.0.7-1) ... Setting up qt5-qmltooling-plugins:amd64 (5.15.8+dfsg-3) ... Setting up python3-pymummer (0.11.0-3) ... Setting up python3-vcf (0.6.8+git20170215.476169c-9+b1) ... Setting up libfreetype-dev:amd64 (2.12.1+dfsg-5) ... Setting up python3-bleach (5.0.1-2) ... Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... Setting up r-cran-wkutils (0.1.3-1) ... Setting up python3-matplotlib-inline (0.1.6-2) ... Setting up python3-mock (4.0.3-4) ... Setting up pbdagcon (0.3+git20180411.c14c422+dfsg-8) ... Setting up python3-fs (2.4.16-2) ... Setting up libqt5quickwidgets5:amd64 (5.15.8+dfsg-3) ... Setting up sspace (2.1.1+dfsg-7) ... Setting up libprotobuf-dev:amd64 (3.21.12-3) ... Setting up libqt5waylandcompositor5:amd64 (5.15.8-2) ... Setting up texlive-bibtex-extra (2022.20230122-4) ... Setting up python3-flufl.lock (5.0.1-4) ... Setting up r-cran-reshape2 (1.4.4-2) ... Setting up python3-beniget (0.4.1-3) ... Setting up libqes-dev (0.2.8+ds-1) ... Setting up r-cran-rmpi (0.6-9.2-2) ... Setting up r-cran-interp (1.1-3-1) ... Setting up r-cran-emmeans (1.8.4-1+dfsg-1) ... Setting up r-cran-rsvd (1.0.5-1) ... Setting up r-cran-slider (0.3.0-1) ... Setting up r-cran-httr2 (0.2.2-2) ... Setting up r-cran-future.apply (1.10.0+dfsg-1) ... Setting up python3-gridfs (3.11.0-1) ... Setting up r-cran-randomfields (3.3.14-1) ... Setting up python3-sqlalchemy-ext:amd64 (1.4.46+ds1-1+b1) ... Setting up python3-prometheus-client (0.16.0-0.1) ... Setting up python3-enlighten (1.11.2-1) ... Setting up python3-yamlordereddictloader (0.4.0-1.1) ... Setting up r-cran-raster (3.6-14-1) ... Setting up libarray-compare-perl (3.0.8-1) ... Setting up python3-stone (3.3.1-2) ... Setting up libspecio-perl (0.48-1) ... Setting up ragout (2.3-4) ... Setting up r-cran-sna (2.7-1-1) ... Setting up liblist-someutils-xs-perl:amd64 (0.58-3) ... Setting up python3-pygments (2.14.0+dfsg-1) ... Setting up libgtksourceview-4-0:amd64 (4.8.4-4) ... Setting up python3-xopen (1.7.0-2) ... Setting up r-cran-rgdal (1.6-4+dfsg-1) ... Setting up python3-zstandard (0.20.0-3) ... Setting up liblist-allutils-perl (0.19-1) ... Setting up epstool (3.09-4) ... Setting up r-cran-systemfonts (1.0.4-1) ... Setting up python3-chardet (5.1.0+dfsg-2) ... Setting up avogadro (1.97.0-1) ... Setting up python3-rfc3986 (1.5.0-2) ... Setting up abyss (2.3.5+dfsg-2) ... Setting up r-bioc-genomeinfodb (1.34.9-1) ... Setting up python3-thriftpy (0.3.9+ds1-2+b3) ... Setting up r-cran-timechange (0.2.0-1) ... Setting up python3-pil.imagetk:amd64 (9.4.0-1.1+b1) ... Setting up qt6-gtk-platformtheme:amd64 (6.4.2+dfsg-10) ... Setting up python3-jsonschema (4.10.3-1) ... Setting up r-cran-emdbook (1.3.12+ds-2) ... Setting up r-cran-th.data (1.1-1-1) ... Setting up r-cran-rsconnect (0.8.29-1) ... Setting up r-cran-phangorn (2.11.1+dfsg-1) ... Setting up python3-executing (1.2.0-2) ... Setting up examl (3.0.22-3+b2) ... Setting up beads (1.1.22-1+b1) ... Setting up libpython3.11-dev:amd64 (3.11.2-6) ... Setting up r-cran-httr (1.4.5+dfsg-1) ... Setting up r-cran-arsenal (3.6.3-1) ... Setting up python3-openpyxl (3.0.9-1) ... Setting up python3-pexpect (4.8.0-4) ... Setting up python3-pyasn1-modules (0.2.8-1) ... Setting up python3-zmq (24.0.1-4+b1) ... Setting up python3-cryptography (38.0.4-3) ... Setting up libboost-system1.74-dev:amd64 (1.74.0+ds1-21) ... Setting up isympy3 (1.11.1-1) ... Setting up python3-git (3.1.30-1+deb12u2) ... Setting up python3-pydantic (1.10.4-1) ... Setting up libbamtools-dev:amd64 (2.5.2+dfsg-4) ... Setting up libminimap2-dev (2.24+dfsg-3+b1) ... Setting up python3-requests (2.28.1+dfsg-1) ... Setting up libopencv-features2d406:amd64 (4.6.0+dfsg-12) ... Setting up r-cran-hms (1.1.2-1) ... Setting up libhdf5-dev (1.10.8+repack1-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up r-cran-scales (1.2.1-1) ... Setting up libparallel-forkmanager-perl (2.02-1) ... Setting up r-cran-memoise (2.0.1-1) ... Setting up r-cran-lava (1.7.2.1+dfsg-1) ... Setting up r-cran-covr (3.6.1+dfsg-1) ... Setting up r-cran-promises (1.2.0.1+dfsg-1) ... Setting up r-cran-purrr (1.0.1-1) ... Setting up python3-pytest-remotedata (0.4.0-1) ... Setting up r-cran-crul (1.3+dfsg-1) ... Setting up r-cran-e1071 (1.7-13-1) ... Setting up r-cran-vegan (2.6-4+dfsg-1) ... Setting up mpqc (2.3.1-22) ... Setting up r-cran-spatstat.data (3.0-0-1) ... Setting up tklib (0.8~20230222-1) ... Setting up r-cran-maxlik (1.5-2-1) ... Setting up python3-click-plugins (1.1.1-4) ... Setting up python3-depinfo (2.2.0-1) ... Setting up r-bioc-beachmat (2.14.0+ds-1) ... Setting up nanosv (1.2.4+git20190409.c1ae30c-6) ... Setting up r-cran-credentials (1.3.2-1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libtrilinos-epetraext-13.2:amd64 (13.2.0-4) ... Setting up massxpert (7.0.0-2) ... Setting up r-cran-multcomp (1.4-22-1) ... Setting up r-cran-svglite (2.1.1-1) ... Setting up python3-retry (0.9.2-2) ... Setting up r-cran-spacetime (1.2-8+dfsg-1) ... Setting up ray (2.3.1-7) ... Setting up r-cran-blob (1.2.3-1) ... Setting up python3-redis (4.3.4-3) ... Setting up python3-pip (23.0.1+dfsg-1) ... Setting up freebayes (1.3.6-2) ... Setting up texinfo (6.8-6+b1) ... Running mktexlsr. This may take some time. ... done. Setting up python3-numpy (1:1.24.2-1) ... Setting up libxml-libxslt-perl:amd64 (2.002001-1) ... Setting up r-cran-htmltools (0.5.4-1) ... Setting up python3-colormath (3.0.0-4) ... Setting up r-cran-wikipedir (1.5.0-3) ... Setting up python3-pybigwig (0.3.18+dfsg-1+b3) ... Setting up libqcustomplot2.1-qt6:amd64 (2.1.0+dfsg1-3.1) ... Setting up r-cran-seuratobject (4.1.3-1) ... Setting up r-cran-spatstat.geom (3.0-6-1) ... Setting up r-bioc-xvector (0.38.0-1) ... Setting up python3-pytest-doctestplus (0.12.1-1) ... Setting up python3-ruamel.yaml (0.17.21-1) ... Setting up qtbase5-dev:amd64 (5.15.8+dfsg-11) ... Setting up libtrilinos-galeri-13.2:amd64 (13.2.0-4) ... Setting up libgenomicsdb0 (1.4.4-3) ... Setting up python3-terminado (0.17.0-1) ... Setting up ghemical (3.0.0-5+b2) ... Setting up r-cran-earth (5.3.2-1) ... Setting up g++ (4:12.2.0-3) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up libpackage-deprecationmanager-perl (0.18-1) ... Setting up r-cran-pkgbuild (1.4.0-1) ... Setting up megahit (1.2.9-4) ... Setting up python3-adal (1.2.7-2) ... Setting up libboost-regex1.74-dev:amd64 (1.74.0+ds1-21) ... Setting up python3-hdmedians (0.14.2-5+b1) ... Setting up python3-pytest-mock (3.8.2-3) ... Setting up at-spi2-core (2.46.0-5) ... Setting up r-bioc-scaledmatrix (1.6.0+dfsg-1) ... Setting up python3-astroid (2.14.2-1) ... Setting up python3-stopit (1.1.2-2) ... Setting up lumpy-sv (0.3.1+dfsg-7) ... Setting up r-cran-hardhat (1.2.0+dfsg-1) ... Setting up python3-rdflib (6.1.1-1) ... Setting up r-cran-lbfgsb3c (2020-3.2-2) ... Setting up r-cran-tikzdevice (0.12.4-1) ... Setting up libpeas-1.0-0:amd64 (1.34.0-1+b1) ... Setting up libtabixpp-dev:amd64 (1.1.2-1) ... Setting up libqt5webenginecore5:amd64 (5.15.13+dfsg-1~deb12u1) ... Setting up r-cran-pdftools (3.3.3-1) ... Setting up libur-perl (0.470+ds-2) ... Setting up r-cran-sass (0.4.5+dfsg-1) ... Setting up libgl1-mesa-dev:amd64 (22.3.6-1+deb12u1) ... Setting up python3-argon2 (21.1.0-2) ... Setting up python3-rsa (4.8-1) ... Setting up r-cran-rcppml (0.3.7-2) ... Setting up python3-requests-file (1.5.1-1) ... Setting up python3-intervaltree-bio (1.0.1-4) ... Setting up libdevel-overloadinfo-perl (0.007-1) ... Setting up libopenjfx-jni (11.0.11+1-3) ... Setting up build-essential (12.9) ... Setting up texlive-xetex (2022.20230122-3) ... Setting up ncbi-acc-download (0.2.8-1) ... Setting up spades (3.15.5+dfsg-2) ... Setting up r-cran-dplyr (1.0.10-1) ... Setting up python3-contourpy (1.0.7-1+b1) ... Setting up libclass-load-xs-perl (0.10-2+b1) ... Setting up python3-consul (0.7.1-2) ... Setting up r-cran-rspectra (0.16-1-1) ... Setting up libboost-dev:amd64 (1.74.0.3) ... Setting up r-cran-drr (0.0.4-2) ... Setting up libpbbam-dev:amd64 (2.1.0+dfsg-2) ... Setting up python3-pytest-openfiles (0.5.0-3) ... Setting up python3-pytest-filter-subpackage (0.1.2-1) ... Setting up libqt5quickparticles5:amd64 (5.15.8+dfsg-3) ... Setting up python3-cachecontrol (0.12.12-2) ... Setting up python3-pydevd (2.9.5+ds-4) ... Setting up glib-networking:amd64 (2.74.0-4) ... Setting up libboost-filesystem1.74-dev:amd64 (1.74.0+ds1-21) ... Setting up bandage (0.9.0-2) ... Setting up python3-py-zipkin (0.15.0-2) ... Setting up libopenmpi-dev:amd64 (4.1.4-3+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libopencv-videoio406:amd64 (4.6.0+dfsg-12) ... Setting up pbjelly (15.8.24+dfsg-7) ... Setting up python3-ncls (0.0.63-hotfix+ds-1+b3) ... Setting up python3-future (0.18.2-6) ... update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python3-tzlocal (4.2-1) ... Setting up r-cran-dbplyr (2.3.0+dfsg-1) ... Setting up r-cran-gplots (3.1.3-1) ... Setting up python3-lzstring (1.0.4-2) ... Setting up python3-invoke (2.0.0-1) ... Setting up r-cran-rsqlite (2.2.20-1) ... Setting up raster3d (3.0-7-2+b1) ... Setting up libparams-validate-perl:amd64 (1.31-1) ... Setting up python3-zict (2.2.0-1) ... Setting up r-cran-webmockr (0.8.2-1) ... Setting up python3-gi-cairo (3.42.2-3+b1) ... Setting up libboost-regex-dev:amd64 (1.74.0.3) ... Setting up python3-dendropy (4.5.2-1) ... Setting up python3-wdlparse (0.1.0-3) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up r-cran-clubsandwich (0.5.8-1) ... Setting up r-cran-spelling (2.2-2) ... Setting up libglut-dev:amd64 (3.4.0-1) ... Setting up r-cran-decor (1.0.1-1+b1) ... Setting up r-cran-gh (1.4.0-1) ... Setting up libpackage-variant-perl (1.003002-2) ... Setting up python3-stack-data (0.6.2-3) ... Setting up r-cran-progress (1.2.2-2) ... Setting up python3-statsmodels-lib:amd64 (0.13.5+dfsg-7) ... Setting up python3-htseq (1.99.2-1+b3) ... Setting up libpbihdf-dev (5.3.5+dfsg-4+b2) ... Setting up r-cran-ttr (0.24.3-1+b1) ... Setting up python3-gdal (3.6.2+dfsg-1+b2) ... Setting up python3-jupyter-core (4.12.0-1) ... Setting up python3-nacl (1.5.0-2) ... Setting up python3-pytest-astropy-header (0.2.2-1) ... Setting up libgspell-1-2:amd64 (1.12.0-1+b2) ... Setting up macs (2.2.7.1-6+b1) ... Setting up python3-mako (1.2.4+ds-1) ... Setting up r-cran-leiden (0.4.3+dfsg-1) ... Setting up libsql-abstract-limit-perl (2:0.14.3-1) ... Setting up libhandy-1-0:amd64 (1.8.1-1) ... Setting up python3-pyqt5 (5.15.9+dfsg-1) ... Setting up python3-dnaio (0.10.0-1+b1) ... Setting up python3-odf (1.4.2-2) ... Setting up libmoox-handlesvia-perl (0.001009-2) ... Setting up python3-optlang (1.5.2-1) ... Setting up python3-dropbox (11.34.0-1) ... Setting up r-cran-cubelyr (1.0.2-1) ... Setting up python3-uncertainties (3.1.6-1) ... Setting up libscalapack-openmpi2.2:amd64 (2.2.1-2+b1) ... Setting up python3-pyqt5.qtpositioning (5.15.9+dfsg-1) ... Setting up python3-pyqt5.qtsvg (5.15.9+dfsg-1) ... Setting up llvm-14-tools (1:14.0.6-12) ... Setting up r-cran-timereg (2.0.5-1) ... Setting up python3-boto (2.49.0-4.1) ... Setting up r-cran-glmnet (4.1-6-1) ... Setting up bioperl (1.7.8-1) ... Setting up r-bioc-multtest (2.54.0-1) ... Setting up staden (2.0.0+b11-4+b1) ... Setting up libvcflib-dev:amd64 (1.0.3+dfsg-2) ... Setting up r-cran-bh (1.74.0-2) ... Setting up libpappsomspp-widget0-qt6:amd64 (0.9.6-1) ... Setting up r-cran-pheatmap (1.0.12-2) ... Setting up python3-httpcore (0.16.3-1) ... Setting up python3-pyqt5.qttexttospeech (5.15.9+dfsg-1) ... Setting up r-cran-phytools (1.5-1-1) ... Setting up xdg-desktop-portal-gtk (1.14.1-1) ... Setting up r-cran-lubridate (1.9.2+dfsg-1) ... Setting up r-cran-genoplotr (0.8.11+dfsg-2) ... Setting up r-cran-pkgload (1.3.2-1) ... Setting up r-cran-r.utils (2.12.2-1) ... Setting up python3-bx (0.9.0-1+b2) ... Setting up rasmol (2.7.6.0-3) ... update-alternatives: using /usr/bin/rasmol-gtk to provide /usr/bin/rasmol (rasmol) in auto mode Setting up gir1.2-gtksource-4:amd64 (4.8.4-4) ... Setting up libwxgtk3.2-1:amd64 (3.2.2+dfsg-2) ... Setting up r-cran-rocr (1.0-11-2) ... Setting up python3-pybedtools (0.9.0-4+b1) ... Setting up r-cran-webshot (0.5.4-1) ... Setting up python3-pyqt5.qtsql (5.15.9+dfsg-1) ... Setting up r-cran-vroom (1.6.1-1) ... Setting up r-cran-rcarb (0.1.6+dfsg-1) ... Setting up python3-cclib (1.6.2-2) ... Setting up sga (0.10.15-7+b1) ... Setting up python3-pyqt5.qtopengl (5.15.9+dfsg-1) ... Setting up r-base-dev (4.2.2.20221110-2) ... Setting up libpbseq-dev:amd64 (5.3.5+dfsg-4+b2) ... Setting up r-cran-prodlim (2019.11.13-1+b1) ... Setting up avogadro-utils (1.97.0-3+b1) ... Setting up r-cran-fitdistrplus (1.1-8-1) ... Setting up libpython3-dev:amd64 (3.11.2-1+b1) ... Setting up r-cran-rncl (0.8.7-1) ... Setting up circos (0.69.9+dfsg-2) ... Setting up python3-importlib-metadata (4.12.0-1) ... Setting up python3-sparqlwrapper (1.8.5-2) ... Setting up r-bioc-biocparallel (1.32.5-1) ... Setting up pstoedit (3.78-2) ... Setting up r-cran-bold (1.2.0-2) ... Setting up r-cran-natserv (1.0.0+dfsg-1) ... Setting up python3-ete3 (3.1.2+dfsg-3) ... /usr/lib/python3/dist-packages/ete3/evol/parser/codemlparser.py:221: SyntaxWarning: "is" with a literal. Did you mean "=="? if line is '\n': Setting up shasta (0.11.1-1+b1) ... Setting up libwxgtk-gl3.2-1:amd64 (3.2.2+dfsg-2) ... Setting up libqt5opengl5-dev:amd64 (5.15.8+dfsg-11) ... Setting up r-cran-seqinr (4.2-23-1) ... Setting up libhypre-2.26.0:amd64 (2.26.0-3) ... Setting up libsql-translator-perl (1.62-3) ... Setting up r-bioc-biocfilecache (2.6.1+dfsg-1) ... Setting up python3-jedi (0.18.2-1) ... Setting up python3-spectra (0.0.11-4) ... Setting up python3-importlib-resources (5.1.2-2) ... Setting up r-cran-mlmetrics (1.1.1-3) ... Setting up libopenms2.6.0:amd64 (2.6.0+cleaned1-3+b4) ... Setting up genomicsdb-tools (1.4.4-3) ... Setting up relion-gui (3.1.3-3+b1) ... Setting up python3-logilab-common (1.9.8-1) ... Setting up python3-rich (13.3.1-1) ... Setting up python3-biomaj3-zipkin (0.2.2-3) ... Setting up libfontconfig-dev:amd64 (2.14.1-4) ... Setting up r-cran-ddalpha (1.3.13-1) ... Setting up pyvcf (0.6.8+git20170215.476169c-9) ... Setting up libcoarrays-dev:amd64 (2.10.1-1+b1) ... Setting up r-bioc-biocsingular (1.14.0+ds-2) ... Setting up plasmidomics (0.2.0-10) ... Setting up python3.11-dev (3.11.2-6) ... Setting up python3-numpy-groupies (0.9.20-1) ... Setting up python3-pbconsensuscore (1.1.1+dfsg-4+b1) ... Setting up r-cran-ggplot2 (3.4.1+dfsg-1) ... Setting up python3-pyqt5.qtmultimedia (5.15.9+dfsg-1) ... Setting up r-cran-ggsignif (0.6.4-1) ... Setting up r-bioc-genomicranges (1.50.2+dfsg-1) ... Setting up topp (2.6.0+cleaned1-3+b4) ... Setting up python3-influxdb (5.3.1-3) ... Setting up libmoose-perl:amd64 (2.2203-1) ... Setting up circos-tools (0.23-1) ... Setting up r-cran-scattermore (0.8-1) ... Setting up python3-tables-lib (3.7.0-5+b1) ... Setting up python3-openssl (23.0.0-1) ... Setting up python3-wxgtk4.0 (4.2.0+dfsg-3) ... Setting up python3-flask (2.2.2-3) ... Setting up r-bioc-rhtslib (2.0.0+dfsg-1) ... Setting up r-cran-dimred (0.2.6-1) ... Setting up r-cran-cellranger (1.1.0-3) ... Setting up python3-watchdog (2.2.1-1) ... Setting up r-cran-r.devices (2.17.1+ds-1) ... Setting up qtwayland5:amd64 (5.15.8-2) ... Setting up dvipng (1.15-1.1+b1) ... Setting up r-cran-rentrez (1.2.3+dfsg-1) ... Setting up python3-pandas-lib:amd64 (1.5.3+dfsg-2) ... Setting up python3-docker (5.0.3-1) ... Setting up r-cran-httpuv (1.6.9+dfsg-1) ... Setting up r-cran-worrms (0.4.2+dfsg-1) ... Setting up python3-pyqt5.qtchart (5.15.6+dfsg-1) ... Setting up r-cran-rematch2 (2.1.2-2) ... Setting up r-cran-rpart (4.1.19-1) ... Setting up r-bioc-biostrings (2.66.0-1) ... Setting up r-cran-boolnet (2.1.7-1) ... Setting up libsoup-3.0-0:amd64 (3.2.2-2) ... Setting up uncalled (2.2+ds1-1+b3) ... Setting up libsql-abstract-classic-perl (1.91-4) ... Setting up python3-schema-salad (8.4.20230213094415-1) ... Setting up r-bioc-rhdf5lib (1.20.0+dfsg-1) ... Setting up python-odf-tools (1.4.2-2) ... Setting up python3-msal (1.21.0-1) ... Setting up python3-sklearn-lib:amd64 (1.2.1+dfsg-1) ... Setting up r-bioc-annotationfilter (1.22.0+dfsg-1) ... Setting up r-cran-fontawesome (0.5.0-1) ... Setting up python3-dask (2022.12.1+dfsg-2) ... Setting up python3-h5py-serial (3.7.0-8) ... Setting up minexpert2 (8.6.3-1) ... Setting up r-cran-spatstat.random (3.1-3-1) ... Setting up python3-msal-extensions (1.0.0-2) ... Setting up r-cran-gert (1.9.2+dfsg-1) ... Setting up python3-yappi (1.4.0-1+b1) ... Setting up r-cran-metamix (0.3-2+b1) ... Setting up libopencv-calib3d406:amd64 (4.6.0+dfsg-12) ... Setting up libvcflib-tools (1.0.3+dfsg-2) ... Setting up r-cran-ggsci (2.9-3) ... Setting up geoclue-2.0 (2.6.0-2) ... Setting up r-cran-modeldata (1.1.0-1) ... Setting up python3-tifffile (20230203-1) ... Setting up python3-libcloud (3.4.1-5) ... Setting up mapdamage (2.2.1+dfsg-3) ... Setting up python3-nbformat (5.5.0-1) ... Setting up microbiomeutil (20101212+dfsg1-5) ... Setting up python3-pyqt5.qtxmlpatterns (5.15.9+dfsg-1) ... Setting up r-bioc-savr (1.36.0-2) ... Setting up libmumps-5.5:amd64 (5.5.1-1) ... Setting up gnuplot-qt (5.4.4+dfsg1-2+b2) ... update-alternatives: using /usr/bin/gnuplot-qt to provide /usr/bin/gnuplot (gnuplot) in auto mode Setting up black (23.1.0-1) ... Setting up python3-multipletau (0.3.3+ds-4) ... Setting up r-cran-gganimate (1.0.8-1) ... Setting up python3-debugpy (1.6.6+ds-1) ... Setting up r-cran-latticeextra (0.6-30-1) ... Setting up libcoarrays-openmpi-dev:amd64 (2.10.1-1+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/open-coarrays/openmpi/bin/caf to provide /usr/bin/caf.openmpi (caf-openmpi) in auto mode update-alternatives: using /usr/bin/caf.openmpi to provide /usr/bin/caf (caf) in auto mode Setting up python3-pytest-arraydiff (0.5.0-2) ... Setting up r-cran-downlit (0.4.2-1) ... Setting up r-cran-solrium (1.2.0+dfsg-1) ... Setting up r-cran-plm (2.6-2+dfsg-1) ... Setting up r-bioc-rhdf5filters (1.10.0+dfsg-1) ... Setting up python3-parasail (1.3.3-1) ... Setting up r-cran-textshaping (0.3.6-1+b1) ... Setting up smrtanalysis (0~20210112) ... Setting up python3-easydev (0.12.0+dfsg-4) ... Setting up python3-sorted-nearest (0.0.38+dfsg-1) ... Setting up libgenome-perl (0.06-7) ... Setting up libopencv-video406:amd64 (4.6.0+dfsg-12) ... Setting up r-cran-ipred (0.9-13-1) ... Setting up python3-pyqt5.qtsensors (5.15.9+dfsg-1) ... Setting up tiddit (3.5.2+dfsg-1) ... Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... Setting up python3-prov (2.0.0-2) ... Setting up r-cran-furrr (0.3.1-1) ... Setting up treeviewx (0.5.1+git20100823.7e4d0e9-4+b2) ... Setting up bio-tradis (1.4.5+dfsg2-1) ... Setting up velvetoptimiser (2.2.6-5) ... Setting up gir1.2-peas-1.0:amd64 (1.34.0-1+b1) ... Setting up r-cran-viridis (0.6.2-1) ... Setting up python3-jupyterlab-pygments (0.2.2-3) ... Setting up libboost-iostreams1.74-dev:amd64 (1.74.0+ds1-21) ... Setting up python3-strictyaml (1.6.1-3) ... Setting up r-bioc-metagenomeseq (1.40.0-1) ... Setting up libgssdp-1.6-0:amd64 (1.6.2-2) ... Setting up libbio-coordinate-perl (1.7.1-4) ... Setting up python3-patsy (0.5.3-1) ... Setting up libtepl-6-2:amd64 (6.4.0-7) ... Setting up python3-erfa (2.0.0.1+ds-3+b1) ... Setting up r-cran-fts (0.9.9.2-2) ... Setting up libopenjfx-java (11.0.11+1-3) ... 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Did you mean "=="? if kma_file is "VCF" and len(self.files) > 1: /usr/lib/python3/dist-packages/cgelib/alignment/aligner.py:246: SyntaxWarning: "is" with a literal. Did you mean "=="? if file_format is 5: /usr/lib/python3/dist-packages/cgelib/alignment/blast/read_files.py:71: SyntaxWarning: "is" with a literal. Did you mean "=="? if aln_file is "XML": Setting up assemblytics (1.2.1+dfsg-1) ... Setting up gedit (44.2-1) ... update-alternatives: using /usr/bin/gedit to provide /usr/bin/gnome-text-editor (gnome-text-editor) in auto mode Setting up libopenms-dev:amd64 (2.6.0+cleaned1-3+b4) ... Setting up openms (2.6.0+cleaned1-3) ... Setting up r-cran-spatstat.model (3.2-1-1) ... Setting up libdbix-class-perl (0.082843-1) ... Setting up r-cran-kaos (0.1.2-2) ... Setting up python3-kubernetes (22.6.0-2) ... Setting up r-bioc-keggrest (1.38.0+dfsg-1) ... Setting up r-cran-haven (2.5.1-1) ... Setting up cutadapt (4.2-1) ... Setting up libdevel-partialdump-perl (0.20-2) ... Setting up r-bioc-annotationdbi (1.60.0-1) ... Setting up r-cran-usethis (2.1.6-1) ... Setting up gstreamer1.0-plugins-good:amd64 (1.22.0-5+deb12u1) ... Setting up q2templates (2022.11.1+ds-2) ... Setting up r-bioc-go.db (3.16.0-1) ... Setting up r-bioc-rhdf5 (2.42.0+dfsg-1) ... Setting up python3-gtfparse (1.3.0+ds-1) ... Setting up python3-s3transfer (0.6.0-1) ... Setting up r-cran-ggally (2.1.2-1) ... Setting up biosyntax-gedit (1.0.0b-4) ... Setting up r-cran-adegraphics (1.0-17-1) ... Setting up libdatetime-timezone-perl (1:2.60-1+2024a) ... Setting up libgupnp-1.6-0:amd64 (1.6.3-1) ... Setting up r-cran-themis (1.0.0-1) ... Setting up r-cran-caret (6.0-93+dfsg-1) ... Setting up python3-cwl-utils (0.22-1) ... Setting up r-bioc-multiassayexperiment (1.24.0+dfsg-2) ... Setting up libmems-dev (1.6.0+4725-9+b1) ... Setting up r-cran-shiny (1.7.4+dfsg-2+deb12u1) ... Setting up r-cran-shinyjs (2.1.0-1) ... Setting up picopore (1.2.0-2) ... Setting up python3-tables (3.7.0-5) ... 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Setting up r-cran-crosstalk (1.2.0+dfsg-1) ... Setting up libdatetime-perl (2:1.59-1) ... Setting up r-cran-rio (0.5.29-1) ... Setting up r-cran-ncdfgeom (1.1.4+dfsg-1) ... Setting up reapr (1.0.18+dfsg-5+b1) ... Setting up r-bioc-rtracklayer (1.58.0-1) ... Setting up python3-pyranges (0.0.111+ds-4) ... Setting up r-cran-nloptr (2.0.3-1) ... Setting up r-bioc-singlecellexperiment (1.20.0+ds-1) ... Setting up libdbix-class-tree-nestedset-perl (0.10-1.1) ... Setting up r-bioc-genomicfeatures (1.50.4+dfsg-1) ... Setting up python3-scipy (1.10.1-2) ... Setting up r-cran-quantreg (5.94-1) ... Setting up r-cran-geepack (1.3.9-1) ... Setting up biosyntax (1.0.0b-4) ... Setting up trim-galore (0.6.10-1) ... Setting up r-cran-cmdfun (1.0.2-2) ... Setting up r-bioc-deseq2 (1.38.3+dfsg-1) ... Setting up yanosim (0.1-5) ... Setting up r-cran-alakazam (1.2.1-1) ... Setting up libtrilinos-ml-13.2:amd64 (13.2.0-4) ... Setting up ballview (1.5.0+git20180813.37fc53c-11) ... Setting up python3-pomegranate (0.14.8-3+b1) ... Setting up r-cran-tigger (1.0.1-1) ... Setting up r-cran-spatstat (3.0-3-1) ... Setting up python3-biomaj3-daemon (3.0.24-2) ... Setting up python3-anndata (0.8.0-4) ... Setting up libbio-chado-schema-perl (0.20000-3) ... Setting up python3-notebook (6.4.12-2.2) ... Setting up pycoqc (2.5.2+dfsg-3) ... Setting up python3-mofapy (1.6.1+dfsg-10) ... Setting up python3-numba (0.56.4+dfsg-2) ... update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode Setting up python3-qtconsole (5.4.0-1) ... Setting up r-cran-lme4 (1.1-31-1) ... Setting up r-cran-htmlwidgets (1.6.1+dfsg-1) ... Setting up r-bioc-megadepth (1.8.0+ds-1) ... Setting up r-cran-colourpicker (1.2.0+dfsg-1) ... Setting up pique (1.0-6) ... Setting up r-cran-lmertest (3.1-3-2) ... Setting up r-cran-profvis (0.3.7+dfsg-2) ... Setting up r-cran-mlmrev (1.0-8-2) ... Setting up r-cran-gstat (2.1-0-1) ... Setting up r-cran-pbkrtest (0.5.2-2) ... Setting up libgstreamer-plugins-bad1.0-0:amd64 (1.22.0-4+deb12u5) ... Setting up libpetsc-real3.18:amd64 (3.18.5+dfsg1-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.18.5 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.18 (libpetsc.so.3.18) in auto mode Setting up python3-biom-format (2.1.12-3+b1) ... Setting up fitgcp (0.0.20150429-5) ... Setting up r-bioc-cner (1.34.0+dfsg-1) ... Setting up r-cran-tufte (0.12-1) ... Setting up toil (5.9.2-2+deb12u1) ... Setting up r-cran-car (3.1-1-1) ... Setting up gstreamer1.0-plugins-bad:amd64 (1.22.0-4+deb12u5) ... Setting up r-cran-rgl (1.0.1-1) ... Setting up libtorch-dev (1.13.1+dfsg-4) ... Setting up r-bioc-scuttle (1.8.4+dfsg-1) ... Setting up python3-sklearn (1.2.1+dfsg-1) ... Setting up libdatetime-format-strptime-perl (1.7900-1) ... Setting up r-bioc-mofa (1.6.1+dfsg-10) ... Setting up libvibrant6-dev:amd64 (6.1.20170106+dfsg1-10) ... Setting up r-cran-rhandsontable (0.3.8+dfsg-1) ... Setting up python3-lmfit (1.1.0-1) ... Setting up uc-echo (1.12-18) ... Setting up r-bioc-bsgenome (1.66.3-1) ... Setting up libsundials-nvecparallel-petsc6:amd64 (6.4.1+dfsg1-3) ... Setting up xpore (2.1-1) ... Setting up r-cran-scatterd3 (1.0.1+dfsg-1) ... Setting up libtorch-test (1.13.1+dfsg-4) ... Setting up r-cran-aer (1.2-10-1) ... Setting up python3-statsmodels (0.13.5+dfsg-7) ... Setting up umis (1.0.8-3+b1) ... Setting up python3-torch (1.13.1+dfsg-4) ... Setting up r-bioc-biocstyle (2.26.0+dfsg-1) ... Setting up r-cran-shazam (1.1.2-1) ... Setting up r-cran-formattable (0.2.1+dfsg-1) ... Setting up tombo (1.5.1-4+b1) ... Setting up r-cran-dynlm (0.3.6-2) ... Setting up python3-widgetsnbextension (6.0.0-11) ... Setting up python3-loompy (3.0.7+dfsg-2) ... /usr/lib/python3/dist-packages/loompy/view_manager.py:23: SyntaxWarning: "is not" with a literal. Did you mean "!="? if type(slice_) is not tuple or len(slice_) is not 2: Setting up r-bioc-ensembldb (2.22.0+dfsg-1) ... Setting up r-cran-dt (0.27+dfsg-1) ... Setting up r-bioc-htsfilter (1.38.0+dfsg-2) ... Setting up scoary (1.6.16-5) ... /usr/lib/python3/dist-packages/scoary/vcf2scoary.py:94: SyntaxWarning: "is not" with a literal. Did you mean "!="? if args.types is not "ALL": /usr/lib/python3/dist-packages/scoary/vcf2scoary.py:172: SyntaxWarning: "is not" with a literal. Did you mean "!="? if args.types is not "ALL": Setting up libwebkit2gtk-4.1-0:amd64 (2.42.2-1~deb12u1) ... Setting up r-cran-devtools (2.4.5-1) ... Setting up rambo-k (1.21+dfsg-4) ... Setting up r-cran-systemfit (1.1-28-1) ... Setting up python3-pynndescent (0.5.8-2) ... Setting up r-bioc-variantannotation (1.44.1-1) ... Setting up jupyter-notebook (6.4.12-2.2) ... Setting up r-cran-rstatix (0.7.2-1) ... Setting up r-cran-dygraphs (1.1.1.6+dfsg-4) ... Setting up r-cran-htmltable (2.4.1-1) ... Setting up python3-ipywidgets (6.0.0-11) ... Setting up libyelp0:amd64 (42.2-1) ... Setting up python3-sklearn-pandas (2.2.0-1.1) ... Setting up zenity (3.44.0-1) ... Setting up r-cran-plotly (4.10.1+dfsg-2) ... Setting up libsundials-sunlinsol3:amd64 (6.4.1+dfsg1-3) ... Setting up r-bioc-scater (1.26.1+ds-1) ... Setting up r-bioc-tfbstools (1.36.0+dfsg-2) ... Setting up r-bioc-mutationalpatterns (3.8.1+dfsg-1) ... Setting up r-cran-ggpubr (0.6.0-1) ... Setting up r-cran-misc3d (0.9-1-1) ... Setting up libdatetime-format-builder-perl (0.8300-1) ... Setting up umap-learn (0.5.3+dfsg-2) ... Setting up octave (7.3.0-2) ... Setting up libdatetime-format-iso8601-perl (0.16-2) ... Setting up libsbml5-octave (5.19.7+dfsg-2) ... Setting up r-cran-rlumshiny (0.2.3-1) ... Setting up r-cran-gprofiler2 (0.2.1+dfsg-1) ... Setting up r-cran-treescape (1.10.18+dfsg-2) ... Setting up r-cran-seurat (4.3.0-1) ... Setting up r-cran-hmisc (4.8-0-1) ... Setting up r-cran-wgcna (1.72-1-1) ... Setting up yelp (42.2-1) ... Setting up sbmltoolbox (4.1.0-5) ... Setting up r-cran-plot3d (1.4-2) ... Setting up ea-utils (1.1.2+dfsg-9+b2) ... Setting up r-cran-rms (6.5-0-1) ... Setting up r-cran-wikidatar (2.3.3-1) ... Setting up r-bioc-biovizbase (1.46.0-1) ... Setting up r-cran-haplo.stats (1.9.3-1) ... Setting up r-cran-ks (1.14.0-1) ... Setting up r-cran-logcondens (2.1.7-1) ... Setting up r-cran-wikitaxa (0.4.0+dfsg-1) ... Setting up r-bioc-gviz (1.42.1+dfsg-1) ... Setting up r-cran-taxize (0.9.100-1) ... Setting up r-bioc-cummerbund (2.40.0-1) ... Setting up python3-fonttools (4.38.0-1+b1) ... Setting up rake (13.0.6-3) ... Setting up python3-ufolib2 (0.14.0+dfsg1-1) ... Setting up node-acorn (8.8.1+ds+~cs25.17.7-2) ... Setting up python3-azure (20230112+git-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up liberror-prone-java (2.18.0-1) ... Setting up python3-matplotlib (3.6.3-1+b1) ... Setting up lefse (1.1.2-1) ... Setting up libruby:amd64 (1:3.1) ... Setting up libwww-perl (6.68-1) ... Setting up libbio-das-lite-perl (2.11-8) ... Setting up python3-bioframe (0.3.3-2) ... Setting up svim (2.0.0-3) ... Setting up tasksel (3.73) ... Setting up python3-seaborn (0.12.2-1) ... Setting up python3-sqt (0.8.0-6+b1) ... Setting up poretools (0.6.0+dfsg-6) ... Setting up ruby-rubygems (3.3.15-2) ... Setting up libnode108:amd64 (18.13.0+dfsg1-1) ... Setting up arden (1.0-5) ... Setting up libbio-primerdesigner-perl (0.07-8) ... Setting up python3-cogent3 (2023.2.12a1+dfsg-2+deb12u1) ... Setting up nodejs (18.13.0+dfsg1-1) ... update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode Setting up python3-upsetplot (0.8.0-1) ... Setting up python3-biotools (1.2.12-5) ... Setting up python3-azure-storage (20230112+git-1) ... Setting up libdigest-md5-file-perl (0.08-1.1) ... Setting up pyscanfcs (0.3.6+ds-4+b1) ... Setting up libguava-java (31.1-1) ... Setting up libapache2-mod-perl2 (2.0.12-1+b2) ... apache2_invoke: Enable module perl Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of restart. Setting up python3-skbio (0.5.8-4) ... Setting up q2-types (2022.11.1-2) ... Setting up python3-fabio (0.14.0+dfsg-2+b2) ... Setting up libapache2-reload-perl (0.13-4) ... Setting up q2-demux (2022.11.1+dfsg-2) ... Setting up libbio-db-biofetch-perl (1.7.3-4) ... Setting up perlprimer (1.2.4-2) ... Setting up r-cran-v8 (4.2.2+dfsg-1) ... Setting up libbiojava1.9-java (1:1.9.5+dfsg-3) ... Setting up libbio-tools-run-remoteblast-perl (1.7.3-3) ... Setting up tasksel-data (3.73) ... Setting up python3-colormap (1.0.4-3) ... Setting up q2-metadata (2022.8.0-1) ... Setting up python3-silx (1.1.0+dfsg-5) ... Setting up libbio-db-embl-perl (1.7.4-4) ... Setting up libcgi-emulate-psgi-perl (0.23-2) ... Setting up pycorrfit (1.1.7+dfsg-2+b1) ... Setting up python3-iow (1.0.6-2) ... Setting up q2-quality-filter (2022.11.1-2) ... Setting up libplexus-container-default-java (2.1.1-1) ... Setting up python3-matplotlib-venn (0.11.6-3) ... Setting up q2-feature-table (2022.11.1+dfsg-2) ... Setting up ruby-sdbm:amd64 (1.0.0-5+b1) ... Setting up med-tasks (3.8.1) ... Setting up q2-taxa (2022.11.1+dfsg-2) ... Setting up multiqc (1.14+dfsg-1) ... Setting up python3-csb (1.2.5+dfsg-8) ... /usr/lib/python3/dist-packages/csb/build.py:291: SyntaxWarning: "is" with a literal. Did you mean "=="? if ex.code is 0: /usr/lib/python3/dist-packages/csb/build.py:345: SyntaxWarning: "is not" with a literal. Did you mean "!="? if ex.code is not 0: /usr/lib/python3/dist-packages/csb/build.py:477: SyntaxWarning: "is" with a literal. Did you mean "=="? if Shell.run([sc, 'help']).code is 0: /usr/lib/python3/dist-packages/csb/test/cases/core/__init__.py:73: SyntaxWarning: "is" with a literal. Did you mean "=="? self.assertFalse(self.enum.C is 66) Setting up libxml-parser-perl (2.46-4) ... Setting up libruby3.1:amd64 (3.1.2-7) ... Setting up tnseq-transit (3.2.7-1) ... Setting up libbiojava-java (1:1.9.5+dfsg-3) ... Setting up python3-pairtools (1.0.2-2+b1) ... Setting up libvm-ec2-perl (1.28-4) ... Setting up python3-smart-open (5.2.1-5) ... Setting up q2-cutadapt (2022.11.1-2) ... Setting up libgraph-readwrite-perl (2.10-1) ... Setting up q2-quality-control (2022.11.1-2) ... Setting up libxml-twig-perl (1:3.52-2) ... Setting up libnet-dbus-perl (1.2.0-2) ... Setting up libxml-dumper-perl (0.81-1.4) ... Setting up libguice-java (4.2.3-2) ... Setting up libxml-xpath-perl (1.48-1) ... Setting up r-cran-jsonld (2.2+dfsg-1) ... Setting up python3-emperor (1.0.3+ds-7) ... Setting up libbio-variation-perl (1.7.5-3) ... Setting up libapache-dbi-perl (1.12-3) ... Setting up python3-unifrac (1.2-3+b1) ... Setting up csb (1.2.5+dfsg-8) ... Setting up libplexus-i18n-java (1.0-beta-10-6) ... Setting up python3-pyfai (0.21.3+dfsg1-4) ... Setting up libxml-sax-expat-perl (0.51-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::Expat with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up ruby3.1 (3.1.2-7) ... Setting up librpc-xml-perl (0.82-1) ... Setting up libplexus-velocity-java (1.2-3.1) ... Setting up roary (3.13.0+dfsg-1) ... Setting up r-cran-rdflib (0.2.5+dfsg-1) ... Setting up libxml-perl (0.08-4) ... Setting up microbegps (1.0.0-5) ... Setting up q2cli (2022.11.1-2) ... Setting up libbio-db-gff-perl (1.7.4-1) ... Setting up surpyvor (0.5-2) ... Setting up psortb (3.0.6+dfsg-3+b2) ... Setting up libbio-db-seqfeature-perl (1.7.4-2) ... Setting up mauve-aligner (2.4.0+4736-6) ... Setting up libbio-graphics-perl (2.40-6) ... Setting up libsoap-lite-perl (1.27-3) ... Setting up libgraphviz-perl (2.24-1) ... Setting up mipe (1.1-9) ... Setting up libmaven3-core-java (3.8.7-1) ... Setting up libbio-cluster-perl (1.7.3-6) ... Setting up libmaven-shared-incremental-java (1.1-3) ... Setting up q2-feature-classifier (2022.11.1-2) ... Setting up libmaven-shared-io-java (3.0.0-4) ... Setting up libxml-dom-perl (1.46-2) ... Setting up libdbix-dbstag-perl (0.12-4) ... Setting up libbio-asn1-entrezgene-perl (1.730-2) ... Setting up libgo-perl (0.15-9) ... Setting up pyfai (0.21.3+dfsg1-4) ... Setting up gbrowse (2.56+dfsg-11) ... apache2_invoke: Enable configuration gbrowse Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of reload. Setting up libxml-dom-xpath-perl (0.14-4) ... Setting up libxml-checker-perl (0.13-7) ... Setting up libbio-eutilities-perl (1.77-2) ... Setting up ruby (1:3.1) ... Setting up libplexus-compiler-java (2.12.1-1) ... Setting up libmaven-compiler-plugin-java (3.10.1-2) ... Setting up libbio-db-ncbihelper-perl (1.7.7-1) ... Setting up libjni-inchi-java (0.8+dfsg-7) ... Setting up ruby-threach (0.2.0-2) ... Setting up vim-addon-manager (0.5.10) ... Setting up libchado-perl (1.31-6) ... DBI connect('dbname=gmod-chado;host=localhost;port=5432','chado',...) failed: connection to server at "localhost" (::1), port 5432 failed: Connection refused Is the server running on that host and accepting TCP/IP connections? connection to server at "localhost" (127.0.0.1), port 5432 failed: Connection refused Is the server running on that host and accepting TCP/IP connections? at /usr/share/perl5/Bio/GMOD/DB/Config.pm line 233. Database access not correctly configured Check your configuration and run manually the database update: cd /usr/share/gmod/chado/ export GMOD_ROOT=/usr/share/gmod/chado export PGPASSFILE=/usr/share/gmod/chado/pgpass For a new installation: make load_schema make prepdb OR make update to upgrade the schema from a previous install Setting up libmaven-file-management-java (3.0.0-1) ... Setting up libxmlrpc-lite-perl (0.717-5) ... Setting up chado-utils (1.31-6) ... Setting up libjmol-java (14.32.83+dfsg-2) ... Setting up libbio-featureio-perl (1.6.905-2) ... Setting up r-cran-qtl (1.58-1) ... Setting up ruby-fixwhich (1.0.2-2) ... Setting up bio-vcf (0.9.5-3) ... Setting up ruby-trollop (2.0-2.1) ... Setting up libmaven-jar-plugin-java (3.3.0-2) ... Setting up ruby-crb-blast (0.6.9-4) ... Setting up libbeam-java (1.3.3-3) ... Setting up libcommons-text-java (1.10.0-1) ... Setting up libmsgpack-java (0.9.3-1) ... Setting up libsignatures-java (1.1.10.g614270e+ds-1) ... Setting up libmmtf-java (1.0.11-1) ... Setting up libdoxia-core-java (1.12.0-1) ... Setting up libdoxia-java (1.12.0-1) ... Setting up libmaven-reporting-api-java (3.1.1-1) ... Processing triggers for install-info (6.8-6+b1) ... Processing triggers for libc-bin (2.36-9+deb12u4) ... Processing triggers for systemd (252.22-1~deb12u1) ... Processing triggers for ca-certificates-java (20230710~deb12u1) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068_2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:E-Tugra_Global_Root_CA_ECC_v3.pem Adding debian:E-Tugra_Global_Root_CA_RSA_v3.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustCor_ECA-1.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up antlr (2.7.7+dfsg-12) ... Setting up openjdk-17-jdk-headless:amd64 (17.0.10+7-1~deb12u1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up ivy (2.5.1-2) ... Setting up antlr3 (3.5.3-1) ... Setting up ant (1.10.13-1) ... Setting up libmsv-java (2009.1+dfsg1-6) ... Setting up junit4 (4.13.2-3) ... Setting up javacc (7.0.12-1) ... Setting up groovy (2.4.21-8) ... update-alternatives: using /usr/share/groovy/bin/groovy to provide /usr/bin/groovy (groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyc to provide /usr/bin/groovyc (groovyc) in auto mode update-alternatives: using /usr/share/groovy/bin/grape to provide /usr/bin/grape (grape) in auto mode update-alternatives: using /usr/share/groovy/bin/startGroovy to provide /usr/bin/startGroovy (startGroovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovysh to provide /usr/bin/groovysh (groovysh) in auto mode update-alternatives: using /usr/share/groovy/bin/java2groovy to provide /usr/bin/java2groovy (java2groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyConsole to provide /usr/bin/groovyConsole (groovyConsole) in auto mode update-alternatives: using /usr/share/groovy/bin/groovydoc to provide /usr/bin/groovydoc (groovydoc) in auto mode Setting up default-jre-headless (2:1.17-74) ... Setting up iva (1.0.11+ds-3) ... Setting up bbmap (39.01+dfsg-2) ... Setting up antlr4 (4.7.2-5) ... Setting up openjdk-17-jre:amd64 (17.0.10+7-1~deb12u1) ... Setting up logol (1.7.9+dfsg-6) ... Setting up varna (3-93+ds-4) ... Setting up libconcurrent-java (1.3.4-6) ... Setting up jaligner (1.0+dfsg-10) ... Setting up default-jre (2:1.17-74) ... Setting up picard-tools (2.27.5+dfsg-2) ... Setting up mhap (2.1.3+dfsg-3) ... Setting up openjdk-17-jdk:amd64 (17.0.10+7-1~deb12u1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up chromimpute (1.0.3+dfsg-4) ... Setting up ant-optional (1.10.13-1) ... Setting up libwoodstox-java (1:6.2.1-1) ... Setting up beagle (220722-1) ... Setting up default-jdk-headless (2:1.17-74) ... Setting up libjsap-java (2.1-5) ... Setting up metastudent (2.0.1-9) ... Setting up javahelp2 (2.0.05.ds1-10) ... Setting up canu (2.0+dfsg-2+b1) ... Setting up pilon (1.24-2) ... Setting up r-cran-rjava (1.0-6-1+b1) ... Setting up libcolt-free-java (1.2.0+dfsg-7) ... Setting up bioperl-run (1.7.3-9) ... Setting up beast2-mcmc (2.7.3+dfsg-1) ... Setting up circlator (1.5.6-7) ... Setting up nanook (1.33+dfsg-5) ... Setting up megan-ce (6.21.1+dfsg-2) ... Setting up unicycler (0.5.0+dfsg-1) ... Setting up libdsiutils-java (2.7.2+dfsg-1) ... Setting up malt (0.5.2-2) ... Setting up libeuclid-java (2.3-1) ... Setting up proalign (0.603-5) ... Setting up thesias (3.1.1-1) ... Setting up paleomix (1.3.7-3) ... Setting up libgpars-groovy-java (1.2.1-11) ... Setting up junit5 (5.9.2-1) ... Setting up libbytecode-java (0.92.svn.20090106-2.1) ... Setting up alter-sequence-alignment (1.3.4-6) ... Setting up jtb (1.4.12-3) ... Setting up trimmomatic (0.39+dfsg-2) ... Setting up melting (5.2.0-2) ... Setting up artfastqgenerator (0.0.20150519-4) ... Setting up prokka (1.14.6+dfsg-4) ... Setting up jmol (14.32.83+dfsg-2) ... Setting up chromhmm (1.24+dfsg-1) ... Setting up libistack-commons-java (3.0.6-5) ... Setting up fastqc (0.11.9+dfsg-6) ... Setting up treeview (1.2.0+dfsg-1) ... Setting up alien-hunter (1.7-10) ... Setting up jemboss (6.6.0+dfsg-12) ... Setting up spread-phy (1.0.7+dfsg-5) ... Setting up neobio (0.0.20030929-6) ... Setting up cgview (0.0.20100111-7) ... Setting up brig (0.95+dfsg-3) ... Setting up default-jdk (2:1.17-74) ... Setting up cct (1:1.0.3-1) ... Setting up libicb-utils-java (2.0.1+git20161002.afee1d9-5) ... Setting up libcmlxom-java (4.3-1) ... Setting up jmodeltest (2.1.10+dfsg-12) ... Setting up beast-mcmc (1.10.4+dfsg-5) ... Setting up libcodemodel-java (2.6+jaxb2.3.0.1-10.1) ... Setting up prottest (3.4.2+dfsg-8) ... Setting up artemis (18.2.0+dfsg-3) ... Setting up libgoby-io-java (3.3.1+dfsg2-9) ... Setting up shovill (1.1.0-9) ... Setting up libtxw2-java (2.3.0.1-10.1) ... Setting up plasmidid (1.6.5+dfsg-2) ... Setting up igv (2.16.0+dfsg-1) ... Setting up libjaxb-java (2.3.0.1-10.1) ... Setting up goby-java (3.3.1+dfsg2-9) ... Setting up libmetro-policy-java (2.7.2-3) ... Setting up libbiojava6-java (6.1.0+dfsg-4) ... Setting up figtree (1.4.4-5) ... Setting up libjaba-client-java (2.2.0-2) ... Setting up rockhopper (2.0.3+dfsg2-3) ... Setting up libsnpeff-java (5.1+d+dfsg-3) ... Setting up rdp-readseq (2.0.2-9) ... Setting up libbiojava4.0-java (4.2.12+dfsg-8) ... Setting up libsnpsift-java (5.1+dfsg2-2) ... Setting up libjaxws-java (2.3.0.2-2) ... Setting up drop-seq-tools (2.5.2+dfsg-1) ... Setting up libbiojava4-java (4.2.12+dfsg-8) ... Setting up snpeff (5.1+d+dfsg-3) ... Setting up snpsift (5.1+dfsg2-2) ... Setting up rdp-classifier (2.10.2-6) ... Setting up jalview (2.11.2.5+dfsg-3) ... Setting up rdp-alignment (1.2.0-8) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.19+dfsg-6) ... Setting up sgml-data (2.0.11+nmu1) ... Setting up polkitd (122-3) ... Creating group 'polkitd' with GID 996. Creating user 'polkitd' (polkit) with UID 996 and GID 996. Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of reload. start-stop-daemon: unable to stat /usr/libexec/polkitd (No such file or directory) Setting up w3c-sgml-lib (1.3-3) ... Setting up libvelocity-tools-java (2.0-8) ... Setting up libdoxia-sitetools-java (1.11.1-1) ... Setting up modemmanager (1.20.4-1) ... Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. Setting up python3-biopython (1.80+dfsg-4+b1) ... Setting up kaptive (2.0.4-1) ... Setting up parsnp (1.7.4+dfsg-2) ... Setting up ariba (2.14.6+ds-5+b1) ... Setting up metaphlan (4.0.4-1) ... Setting up python3-nanoget (1.16.1-2) ... Setting up recan (0.1.5+dfsg-2) ... Setting up python3-cgecore (1.5.6+ds-1) ... Setting up python3-gffutils (0.11.1-3) ... Setting up libmaven-reporting-impl-java (3.2.0-2) ... Setting up srst2 (0.2.0-9) ... Setting up seqsero (1.0.1+dfsg-6) ... Setting up python3-presto (0.7.1-1) ... Setting up python3-treetime (0.9.4-1) ... Setting up virulencefinder (2.0.4-3) ... Setting up seqmagick (0.8.4-3) ... Setting up kleborate (2.3.1-2) ... Setting up gasic (0.0.r19-8) ... Setting up gubbins (2.4.1-5) ... Setting up busco (5.4.4-1) ... Setting up cnvkit (0.9.9-2+b1) ... Setting up optimir (1.2-1) ... /usr/lib/python3/dist-packages/optimir/libs/get_counts.py:453: SyntaxWarning: "is" with a literal. Did you mean "=="? if prefix is '': Setting up nanofilt (2.8.0-1) ... Setting up cutesv (2.0.2-1) ... Setting up mcaller (1.0.3+git20210624.b415090-3) ... Setting up python3-nanostat (1.4.0-3) ... Setting up changeo (1.3.0-1) ... Setting up python3-peptidebuilder (1.1.0-3) ... Setting up nanolyse (1.2.0-4) ... Setting up python3-pbcore (2.1.2+dfsg-5) ... Setting up python3-cooler (0.9.1-1) ... Setting up python3-bcbio-gff (0.6.9-1) ... Setting up graphlan (1.1.3-4) ... Setting up readucks (0.0.3-5) ... Setting up python3-pyani (0.2.12-2) ... Setting up yanagiba (1.0.0-5) ... Setting up insilicoseq (1.5.4-6) ... Setting up python3-mirtop (0.4.25-2) ... /usr/lib/python3/dist-packages/mirtop/mirna/mintplates.py:512: SyntaxWarning: "is" with a literal. Did you mean "=="? if prefix is '': Setting up presto (0.7.1-1) ... Setting up augur (20.0.0-1) ... Setting up qcat (1.1.0-6) ... Setting up libjavacc-maven-plugin-java (2.6-5) ... Setting up resfinder (4.3.0-1) ... Setting up python3-kineticstools (0.6.1+git20220223.1326a4d+dfsg-2+b1) ... Setting up hinge (0.5.0-7+b1) ... Setting up nanostat (1.4.0-3) ... Setting up libcdk-java (1:2.8-2) ... Setting up mirtop (0.4.25-2) ... Setting up kineticstools (0.6.1+git20220223.1326a4d+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up docbook-xml (4.5-12) ... Setting up python3-docutils (0.19+dfsg-6) ... Setting up snakemake (7.21.0-1) ... Setting up python3-pdb2pqr (3.5.2+dfsg-3) ... Setting up python3-sphinx (5.3.0-4) ... Setting up python3-guzzle-sphinx-theme (0.7.11-6) ... Setting up obitools (1.2.13+dfsg-5+b1) ... Setting up qcumber (2.3.0-2) ... ************************************************************************* * Minikraken DB is missing. Either move the according files to * * /var/lib/kraken/minikraken_20141208 * or call the script /usr/share/doc/qcumber/get-minikrakendb as root. * ************************************************************************* Setting up pdb2pqr (3.5.2+dfsg-3) ... Setting up python3-numpydoc (1.5.0-1) ... Setting up python3-deeptools (3.5.1-3) ... Setting up khmer-common (3.0.0~a3+dfsg-4) ... Setting up pigx-rnaseq (0.1.0-1.1) ... Setting up khmer (3.0.0~a3+dfsg-4+b2) ... /usr/lib/python3/dist-packages/khmer/tests/test_subset_graph.py:61: SyntaxWarning: "is" with a literal. Did you mean "=="? assert len(divvy) is 3 /usr/lib/python3/dist-packages/khmer/tests/test_subset_graph.py:82: SyntaxWarning: "is" with a literal. Did you mean "=="? assert len(divvy) is 3 /usr/lib/python3/dist-packages/khmer/tests/test_subset_graph.py:278: SyntaxWarning: "is" with a literal. Did you mean "=="? assert len(divvy) is 3 /usr/lib/python3/dist-packages/khmer/tests/test_subset_graph.py:476: SyntaxWarning: "is" with a literal. Did you mean "=="? assert len(divvy) is 3 /usr/lib/python3/dist-packages/khmer/tests/test_subset_graph.py:509: SyntaxWarning: "is" with a literal. Did you mean "=="? assert len(divvy) is 3 Processing triggers for menu (2.1.49) ... Setting up blends-common (0.7.5) ... Setting up med-config (3.8.1) ... Adding group `med' (GID 161) ... Done. Setting up med-bio-dev (3.8.1) ... Setting up med-bio (3.8.1) ... Setting up med-statistics (3.8.1) ... Processing triggers for dictionaries-common (1.29.5) ... aspell-autobuildhash: processing: en [en-common]. aspell-autobuildhash: processing: en [en-variant_0]. aspell-autobuildhash: processing: en [en-variant_1]. aspell-autobuildhash: processing: en [en-variant_2]. aspell-autobuildhash: processing: en [en-w_accents-only]. aspell-autobuildhash: processing: en [en-wo_accents-only]. aspell-autobuildhash: processing: en [en_AU-variant_0]. aspell-autobuildhash: processing: en [en_AU-variant_1]. aspell-autobuildhash: processing: en [en_AU-w_accents-only]. aspell-autobuildhash: processing: en [en_AU-wo_accents-only]. aspell-autobuildhash: processing: en [en_CA-variant_0]. aspell-autobuildhash: processing: en [en_CA-variant_1]. aspell-autobuildhash: processing: en [en_CA-w_accents-only]. aspell-autobuildhash: processing: en [en_CA-wo_accents-only]. aspell-autobuildhash: processing: en [en_GB-ise-w_accents-only]. aspell-autobuildhash: processing: en [en_GB-ise-wo_accents-only]. aspell-autobuildhash: processing: en [en_GB-ize-w_accents-only]. aspell-autobuildhash: processing: en [en_GB-ize-wo_accents-only]. aspell-autobuildhash: processing: en [en_GB-variant_0]. aspell-autobuildhash: processing: en [en_GB-variant_1]. aspell-autobuildhash: processing: en [en_US-w_accents-only]. aspell-autobuildhash: processing: en [en_US-wo_accents-only]. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for dbus (1.14.10-1~deb12u1) ... Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Processing triggers for libgdk-pixbuf-2.0-0:amd64 (2.42.10+dfsg-1+b1) ... Processing triggers for libc-bin (2.36-9+deb12u4) ... Processing triggers for sgml-base (1.31) ... Processing triggers for ca-certificates-java (20230710~deb12u1) ... done. 38m27.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'apt-get', '-y', 'install', 'med-all=3.8.1'] 38m27.9s INFO: Running scripts post_install 38m27.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_install_exceptions'] 38m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', 'tmp/scripts/post_install_exceptions'] 38m29.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpo_41_acv'] 38m49.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpo_41_acv'] 39m37.9s ERROR: WARN: Broken symlinks: /usr/share/texlive/texmf-dist/tex/latex/pdfx/sRGB_IEC61966-2-1_black_scaled.icc -> ../../../../../color/icc/sRGB_IEC61966-2-1_black_scaled.icc (texlive-latex-extra) /usr/share/logol/lib/biojava.jar -> ../../java/biojava.jar (logol) /usr/share/gbrowse/htdocs/i -> /var/cache/gbrowse/images (gbrowse) /usr/share/BALL-1.5/BALLView/html -> ../../doc/libball1.5-data/BALLView/html (libball1.5-data) /usr/share/nodejs/clipboard/demo -> ../../doc/node-clipboard/demo (node-clipboard) /usr/share/doc/rdp-classifier-doc/api/jquery/jquery-3.5.1.js -> ../../../../javascript/jquery/query.js (rdp-classifier-doc) /usr/share/doc/quorum/README -> README.md (quorum) /usr/share/doc/libucx0/README -> README.md (libucx0:amd64) /usr/lib/transdecoder/util/__pwm_tests/pasa_assemblies.fasta.gz -> ../../sample_data/pasa_example/pasa_assemblies.fasta.gz (transdecoder) /usr/lib/debian-med/bin/kget -> ../../../bin/vdb-get (sra-toolkit) /usr/lib/jvm/openjdk-17/src.zip -> lib/src.zip (openjdk-17-jdk:amd64) /usr/lib/jvm/java-17-openjdk-amd64/lib/src.zip -> ../../openjdk-17/src.zip (openjdk-17-jdk-headless:amd64) /usr/lib/python3/dist-packages/torch/lib/libcaffe2_observers.so -> ../../../../x86_64-linux-gnu/libcaffe2_observers.so.1.13 (python3-torch) /usr/lib/python3/dist-packages/torch/lib/libcaffe2_module_test_dynamic.so -> ../../../../x86_64-linux-gnu/libcaffe2_module_test_dynamic.so.1.13 (python3-torch) /usr/lib/python3/dist-packages/torch/lib/libcaffe2_detectron_ops.so -> ../../../../x86_64-linux-gnu/libcaffe2_detectron_ops.so.1.13 (python3-torch) /usr/lib/python3/dist-packages/torch/include/TH -> ../../../../../include/TH (python3-torch) /usr/lib/x86_64-linux-gnu/libcaffe2_observers.so -> libcaffe2_observers.so.1.13 (libtorch-dev) /usr/lib/x86_64-linux-gnu/libcaffe2_module_test_dynamic.so -> libcaffe2_module_test_dynamic.so.1.13 (libtorch-dev) /usr/lib/x86_64-linux-gnu/libcaffe2_detectron_ops.so -> libcaffe2_detectron_ops.so.1.13 (libtorch-dev) /usr/lib/x86_64-linux-gnu/node_modules -> nodejs (nodejs) 39m38.5s INFO: /bin converted to /usr/bin by /usr merge 39m38.5s INFO: /lib converted to /usr/lib by /usr merge 39m38.5s INFO: /lib/firmware converted to /usr/lib/firmware by /usr merge 39m38.5s INFO: /lib/init converted to /usr/lib/init by /usr merge 39m38.5s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 39m38.5s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 39m38.5s INFO: /lib/modprobe.d converted to /usr/lib/modprobe.d by /usr merge 39m38.5s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 39m38.5s INFO: /lib/systemd/network converted to /usr/lib/systemd/network by /usr merge 39m38.5s INFO: /lib/systemd/ntp-units.d converted to /usr/lib/systemd/ntp-units.d by /usr merge 39m38.5s INFO: /lib/systemd/system-generators converted to /usr/lib/systemd/system-generators by /usr merge 39m38.5s INFO: /lib/systemd/system-preset converted to /usr/lib/systemd/system-preset by /usr merge 39m38.5s INFO: /lib/systemd/system-sleep converted to /usr/lib/systemd/system-sleep by /usr merge 39m38.5s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 39m38.5s INFO: /lib/systemd/system/getty.target.wants converted to /usr/lib/systemd/system/getty.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/graphical.target.wants converted to /usr/lib/systemd/system/graphical.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/initrd-root-device.target.wants converted to /usr/lib/systemd/system/initrd-root-device.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/initrd-root-fs.target.wants converted to /usr/lib/systemd/system/initrd-root-fs.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/initrd.target.wants converted to /usr/lib/systemd/system/initrd.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/multi-user.target.wants converted to /usr/lib/systemd/system/multi-user.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/rc-local.service.d converted to /usr/lib/systemd/system/rc-local.service.d by /usr merge 39m38.5s INFO: /lib/systemd/system/rescue.target.wants converted to /usr/lib/systemd/system/rescue.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/sockets.target.wants converted to /usr/lib/systemd/system/sockets.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/sysinit.target.wants converted to /usr/lib/systemd/system/sysinit.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/systemd-localed.service.d converted to /usr/lib/systemd/system/systemd-localed.service.d by /usr merge 39m38.5s INFO: /lib/systemd/system/timers.target.wants converted to /usr/lib/systemd/system/timers.target.wants by /usr merge 39m38.5s INFO: /lib/systemd/system/user-.slice.d converted to /usr/lib/systemd/system/user-.slice.d by /usr merge 39m38.5s INFO: /lib/systemd/system/user@.service.d converted to /usr/lib/systemd/system/user@.service.d by /usr merge 39m38.5s INFO: /lib/systemd/system/user@0.service.d converted to /usr/lib/systemd/system/user@0.service.d by /usr merge 39m38.5s INFO: /lib/terminfo converted to /usr/lib/terminfo by /usr merge 39m38.5s INFO: /lib/terminfo/E converted to /usr/lib/terminfo/E by /usr merge 39m38.5s INFO: /lib/terminfo/a converted to /usr/lib/terminfo/a by /usr merge 39m38.5s INFO: /lib/terminfo/c converted to /usr/lib/terminfo/c by /usr merge 39m38.5s INFO: /lib/terminfo/d converted to /usr/lib/terminfo/d by /usr merge 39m38.5s INFO: /lib/terminfo/h converted to /usr/lib/terminfo/h by /usr merge 39m38.5s INFO: /lib/terminfo/l converted to /usr/lib/terminfo/l by /usr merge 39m38.5s INFO: /lib/terminfo/m converted to /usr/lib/terminfo/m by /usr merge 39m38.5s INFO: /lib/terminfo/p converted to /usr/lib/terminfo/p by /usr merge 39m38.5s INFO: /lib/terminfo/r converted to /usr/lib/terminfo/r by /usr merge 39m38.5s INFO: /lib/terminfo/s converted to /usr/lib/terminfo/s by /usr merge 39m38.5s INFO: /lib/terminfo/t converted to /usr/lib/terminfo/t by /usr merge 39m38.5s INFO: /lib/terminfo/v converted to /usr/lib/terminfo/v by /usr merge 39m38.5s INFO: /lib/terminfo/w converted to /usr/lib/terminfo/w by /usr merge 39m38.5s INFO: /lib/terminfo/x converted to /usr/lib/terminfo/x by /usr merge 39m38.5s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 39m38.5s INFO: /lib/udev/hwdb.d converted to /usr/lib/udev/hwdb.d by /usr merge 39m38.5s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 39m38.5s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 39m38.5s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 39m38.6s INFO: /lib32 converted to /usr/lib32 by /usr merge 39m38.6s INFO: /lib64 converted to /usr/lib64 by /usr merge 39m38.6s INFO: /sbin converted to /usr/sbin by /usr merge 40m4.5s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', '-ac', '--ignore-obsolete'] 46m9.0s DUMP: debsums: missing file /srv/piuparts.debian.org/tmp/tmpo_41_acv/var/lib/metaphlan2-data/markers.fasta (from metaphlan2-data package) 46m9.0s DEBUG: Command failed (status=2), but ignoring error: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpo_41_acv', '-ac', '--ignore-obsolete'] 46m9.0s ERROR: FAIL: debsums reports modifications inside the chroot: debsums: missing file /var/lib/metaphlan2-data/markers.fasta (from metaphlan2-data package) 46m29.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/shm'] 46m29.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/shm'] 46m29.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/console'] 46m29.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/console'] 46m29.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/ptmx'] 46m29.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/ptmx'] 46m29.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/pts'] 46m29.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/dev/pts'] 46m29.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/proc'] 46m29.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpo_41_acv/proc'] 46m29.7s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpo_41_acv'] 46m39.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpo_41_acv'] 46m39.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpo_41_acv 46m39.7s ERROR: piuparts run ends. ret=1 End: 2024-04-25 08:21:37 GMT