Start: 2024-08-22 10:59:36 GMT [bookworm] Package: gbrowse-calign Source: gbrowse (2.56+dfsg-11) Version: 2.56+dfsg-11+b1 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.36.0-4), perlapi-5.36.0, libc6 (>= 2.4), gbrowse Description: CAlign helper Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Description-md5: 52106883c9df300bab833de801839ea2 Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-11+b1_amd64.deb Size: 35356 MD5sum: e7cebff2c3a2b818557e9220cd0589fa SHA256: cc4c3b3d2032f45907a7e739a3707a4b0ed4aab012a1778dcba030689458bc77 [bookworm-next] Package: gbrowse-calign Source: gbrowse (2.56+dfsg-11) Version: 2.56+dfsg-11+b1 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.36.0-4), perlapi-5.36.0, libc6 (>= 2.4), gbrowse Description: CAlign helper Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Description-md5: 52106883c9df300bab833de801839ea2 Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-11+b1_amd64.deb Size: 35356 MD5sum: e7cebff2c3a2b818557e9220cd0589fa SHA256: cc4c3b3d2032f45907a7e739a3707a4b0ed4aab012a1778dcba030689458bc77 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d bookworm -d bookworm-next -B /srv/piuparts.debian.org/slave/refchroot/bookworm2next/reference-chroot-metadata.dat --apt gbrowse-calign=2.56+dfsg-11+b1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.4~202408201642~1.4.3-11-g36a88c35 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d bookworm -d bookworm-next -B /srv/piuparts.debian.org/slave/refchroot/bookworm2next/reference-chroot-metadata.dat --apt gbrowse-calign=2.56+dfsg-11+b1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-32-amd64 #1 SMP Debian 5.10.223-1 (2024-08-10) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp05b24prf 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp05b24prf 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp05b24prf', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp05b24prf', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp05b24prf/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp05b24prf/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/pts'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/pts'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/ptmx'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/ptmx'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/console'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/console'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/shm'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/shm'] 0m0.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m0.3s DEBUG: Created policy-rc.d and chmodded it. 0m0.3s DEBUG: Created resolv.conf. 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp05b24prf/tmp/scripts/ 0m0.3s INFO: Running scripts post_chroot_unpack 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', 'update'] 0m1.1s DUMP: Hit:1 http://deb.debian.org/debian bookworm InRelease Reading package lists... 0m1.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', 'update'] 0m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-yf', 'dist-upgrade'] 0m1.6s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-yf', 'dist-upgrade'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.1s DUMP: 913e17be84ed63a3110ce3137c1d003a - 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.1s INFO: Running scripts post_setup 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_dummy_users'] 0m2.9s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_dummy_users'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_forbid_home'] 0m2.9s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_forbid_home'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.9s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_minimize'] 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_minimize'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_zz_backports'] 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_setup_zz_backports'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.0s DUMP: install ok installed adduser adduser 3.134 install ok installed apt apt 2.6.1 install ok installed base-files base-files 12.4+deb12u6 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2+b7 install ok installed bsdutils bsdutils 1:2.38.1-5+deb12u1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-2 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2023.3+deb12u1 install ok installed debianutils debianutils 5.7-0.5~deb12u1 install ok installed diffutils diffutils 1:3.8-4 install ok installed dpkg dpkg 1.21.22 install ok installed e2fsprogs e2fsprogs 1.47.0-2 install ok installed findutils findutils 4.9.0-4 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14 install ok installed gpgv gpgv 2.2.40-1.1 install ok installed grep grep 3.8-5 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.6.1 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.9-1 install ok installed libaudit1:amd64 libaudit1 1:3.0.9-1 install ok installed libblkid1:amd64 libblkid1 2.38.1-5+deb12u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-9+deb12u7 install ok installed libc6:amd64 libc6 2.36-9+deb12u7 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b3 install ok installed libcap2:amd64 libcap2 1:2.66-4 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.270 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.9-2+deb12u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.2 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-5+deb12u1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6+deb12u1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6+deb12u1 install ok installed libpam-runtime libpam-runtime 1.5.2-6+deb12u1 install ok installed libpam0g:amd64 libpam0g 1.5.2-6+deb12u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+deb12u1 install ok installed libselinux1:amd64 libselinux1 3.4-1+b6 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b5 install ok installed libsepol2:amd64 libsepol2 3.4-2.1 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-5+deb12u1 install ok installed libss2:amd64 libss2 1.47.0-2 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14 install ok installed libsystemd0:amd64 libsystemd0 252.26-1~deb12u2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.4-4 install ok installed libudev1:amd64 libudev1 252.26-1~deb12u2 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-5+deb12u1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.4+dfsg2-5 install ok installed login login 1:4.13+dfsg1-1+b1 install ok installed logsave logsave 1.47.0-2 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-5+deb12u1 install ok installed ncurses-base ncurses-base 6.4-4 install ok installed ncurses-bin ncurses-bin 6.4-4 install ok installed passwd passwd 1:4.13+dfsg1-1+b1 install ok installed perl-base perl-base 5.36.0-7+deb12u1 install ok installed sed sed 4.9-1 install ok installed sysvinit-utils sysvinit-utils 3.06-4 install ok installed tar tar 1.34+dfsg-1.2+deb12u1 install ok installed tzdata tzdata 2024a-0+deb12u1 install ok installed usr-is-merged usr-is-merged 37~deb12u1 install ok installed util-linux util-linux 2.38.1-5+deb12u1 install ok installed util-linux-extra util-linux-extra 2.38.1-5+deb12u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.0s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/bookworm2next/reference-chroot-metadata.dat 0m3.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m3.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m3.3s INFO: Running scripts is_testable 0m3.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/is_testable_uninstallable'] 0m3.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/is_testable_uninstallable'] 0m3.3s INFO: Running scripts pre_test 0m3.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_test_exceptions'] 0m3.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_test_exceptions'] 0m3.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_test_root_password'] 0m3.4s DUMP: New password: Retype new password: passwd: password updated successfully 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_test_root_password'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 0m3.5s DUMP: Package: gbrowse-calign Source: gbrowse (2.56+dfsg-11) Version: 2.56+dfsg-11+b1 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.36.0-4), perlapi-5.36.0, libc6 (>= 2.4), gbrowse Description-en: CAlign helper Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). . This package provides the CAlign helper for use with Realign. It speeds up Smith-Waterman alignment. Description-md5: 52106883c9df300bab833de801839ea2 Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-11+b1_amd64.deb Size: 35356 MD5sum: e7cebff2c3a2b818557e9220cd0589fa SHA256: cc4c3b3d2032f45907a7e739a3707a4b0ed4aab012a1778dcba030689458bc77 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 0m3.5s INFO: apt-cache knows about the following packages: gbrowse-calign 0m3.5s INFO: Running scripts pre_install 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_database-server'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_database-server'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_exceptions'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_exceptions'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_extras'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_extras'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy'] 0m3.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release v=12.6,o=Debian,a=stable,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy', 'gbrowse-calign'] 0m3.6s DUMP: gbrowse-calign: Installed: (none) Candidate: 2.56+dfsg-11+b1 Version table: 2.56+dfsg-11+b1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy', 'gbrowse-calign'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-y', 'install', 'gbrowse-calign'] 0m19.3s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: apache2 apache2-bin apache2-data apache2-utils bioperl ca-certificates fontconfig-config fonts-dejavu-core gbrowse libabsl20220623 libalgorithm-diff-perl libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl libaom3 libapache-dbi-perl libapache2-mod-perl2 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libavif15 libbio-coordinate-perl libbio-db-biofetch-perl libbio-db-gff-perl libbio-db-seqfeature-perl libbio-graphics-perl libbio-perl-perl libbrotli1 libbsd0 libcapture-tiny-perl libcgi-pm-perl libcgi-session-perl libclass-data-inheritable-perl libclone-perl libcommon-sense-perl libcurl4 libdata-stag-perl libdav1d6 libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libde265-0 libdeflate0 libdevel-stacktrace-perl libdevel-symdump-perl libencode-locale-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfile-listing-perl libfontconfig1 libfreetype6 libgav1-1 libgd-perl libgd3 libgdbm-compat4 libgdbm6 libgssapi-krb5-2 libheif1 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjansson4 libjbig0 libjpeg62-turbo libjs-prototype libjs-scriptaculous libjson-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblerc4 liblist-moreutils-perl liblist-moreutils-xs-perl liblua5.3-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libncursesw6 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnuma1 libperl5.36 libpng16-16 libpq5 libproc2-0 libpsl5 librav1e0 libreadline8 libregexp-ipv6-perl librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libssl3 libstatistics-descriptive-perl libstring-approx-perl libsub-uplevel-perl libsvtav1enc1 libterm-readkey-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl libtiff6 libtimedate-perl libtry-tiny-perl liburi-perl libvm-ec2-perl libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx265-199 libxau6 libxcb1 libxdmcp6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxpm4 libyuv0 media-types netbase openssl perl perl-modules-5.36 perl-openssl-defaults procps readline-common sensible-utils sqlite3 ucf Suggested packages: apache2-doc apache2-suexec-pristine | apache2-suexec-custom www-browser groff-base gbrowse-data libfile-nfslock-perl libev-perl libevent-perl libio-async-perl libpoe-perl libtask-weaken-perl libxml-sax-expatxs-perl libmldbm-perl libnet-daemon-perl libsql-statement-perl libgd-tools gdbm-l10n krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libsub-name-perl libbusiness-isbn-perl libauthen-ntlm-perl perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make libtap-harness-archive-perl debhelper readline-doc sqlite3-doc Recommended packages: ssl-cert bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl libyaml-perl libace-perl libxml-twig-perl libset-scalar-perl libalgorithm-diff-xs-perl libasync-interrupt-perl libev-perl | libevent-perl libguard-perl libapache2-reload-perl libbsd-resource-perl libbio-scf-perl libberkeleydb-perl libgd-svg-perl bioperl-run | libbio-perl-run-perl libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl libdbd-mysql-perl libgraph-perl libgraphviz-perl libhtml-tableextract-perl libpostscript-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl libxml-dom-xpath-perl libxml-parser-perl libxml-sax-writer-perl libxml-writer-perl libcgi-fast-perl libfreezethaw-perl perl-tk libxml-libxslt-perl libmldbm-perl libxml-perl libhtml-format-perl javascript-common libjson-xs-perl krb5-locales libldap-common libgpm2 publicsuffix libsasl2-modules libdata-dump-perl libhtml-form-perl libmailtools-perl libxml-sax-expat-perl psmisc The following NEW packages will be installed: apache2 apache2-bin apache2-data apache2-utils bioperl ca-certificates fontconfig-config fonts-dejavu-core gbrowse gbrowse-calign libabsl20220623 libalgorithm-diff-perl libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl libaom3 libapache-dbi-perl libapache2-mod-perl2 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libavif15 libbio-coordinate-perl libbio-db-biofetch-perl libbio-db-gff-perl libbio-db-seqfeature-perl libbio-graphics-perl libbio-perl-perl libbrotli1 libbsd0 libcapture-tiny-perl libcgi-pm-perl libcgi-session-perl libclass-data-inheritable-perl libclone-perl libcommon-sense-perl libcurl4 libdata-stag-perl libdav1d6 libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libde265-0 libdeflate0 libdevel-stacktrace-perl libdevel-symdump-perl libencode-locale-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfile-listing-perl libfontconfig1 libfreetype6 libgav1-1 libgd-perl libgd3 libgdbm-compat4 libgdbm6 libgssapi-krb5-2 libheif1 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjansson4 libjbig0 libjpeg62-turbo libjs-prototype libjs-scriptaculous libjson-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblerc4 liblist-moreutils-perl liblist-moreutils-xs-perl liblua5.3-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libncursesw6 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnuma1 libperl5.36 libpng16-16 libpq5 libproc2-0 libpsl5 librav1e0 libreadline8 libregexp-ipv6-perl librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libssl3 libstatistics-descriptive-perl libstring-approx-perl libsub-uplevel-perl libsvtav1enc1 libterm-readkey-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl libtiff6 libtimedate-perl libtry-tiny-perl liburi-perl libvm-ec2-perl libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx265-199 libxau6 libxcb1 libxdmcp6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxpm4 libyuv0 media-types netbase openssl perl perl-modules-5.36 perl-openssl-defaults procps readline-common sensible-utils sqlite3 ucf 0 upgraded, 153 newly installed, 0 to remove and 0 not upgraded. Need to get 54.2 MB of archives. After this operation, 210 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 perl-modules-5.36 all 5.36.0-7+deb12u1 [2815 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libgdbm6 amd64 1.23-3 [72.2 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libgdbm-compat4 amd64 1.23-3 [48.2 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 libperl5.36 amd64 5.36.0-7+deb12u1 [4218 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 perl amd64 5.36.0-7+deb12u1 [239 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 libapr1 amd64 1.7.2-3 [102 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.13-1~deb12u1 [2022 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libaprutil1 amd64 1.6.3-1 [87.8 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.40.1-2 [837 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 libaprutil1-dbd-sqlite3 amd64 1.6.3-1 [13.6 kB] Get:12 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 libaprutil1-ldap amd64 1.6.3-1 [11.8 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-2+deb12u1 [32.4 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-2+deb12u1 [78.9 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:20 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-2+deb12u1 [332 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-2+deb12u1 [134 kB] Get:22 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1+deb12u1 [72.4 kB] Get:23 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-10+deb12u6 [390 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 libjansson4 amd64 2.14-2 [40.8 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 liblua5.3-0 amd64 5.3.6-2 [123 kB] Get:29 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.3~deb12u1 [687 kB] Get:31 http://deb.debian.org/debian bookworm/main amd64 apache2-bin amd64 2.4.59-1~deb12u1 [1380 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 apache2-data all 2.4.59-1~deb12u1 [160 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 apache2-utils amd64 2.4.59-1~deb12u1 [207 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 libncursesw6 amd64 6.4-4 [134 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 libproc2-0 amd64 2:4.0.2-3 [62.8 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 procps amd64 2:4.0.2-3 [709 kB] Get:38 http://deb.debian.org/debian bookworm/main amd64 apache2 amd64 2.4.59-1~deb12u1 [220 kB] Get:39 http://deb.debian.org/debian bookworm/main amd64 netbase all 6.4 [12.8 kB] Get:40 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:41 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get:42 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.13-1~deb12u1 [1418 kB] Get:43 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20230311 [153 kB] Get:44 http://deb.debian.org/debian bookworm/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:45 http://deb.debian.org/debian bookworm/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:46 http://deb.debian.org/debian bookworm/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:47 http://deb.debian.org/debian bookworm/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:48 http://deb.debian.org/debian bookworm/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:49 http://deb.debian.org/debian bookworm/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:50 http://deb.debian.org/debian bookworm/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:51 http://deb.debian.org/debian bookworm/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get:52 http://deb.debian.org/debian bookworm/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:53 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:54 http://deb.debian.org/debian bookworm/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:55 http://deb.debian.org/debian bookworm/main amd64 libtest-differences-perl all 0.69-1 [18.9 kB] Get:56 http://deb.debian.org/debian bookworm/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:57 http://deb.debian.org/debian bookworm/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:58 http://deb.debian.org/debian bookworm/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:59 http://deb.debian.org/debian bookworm/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get:60 http://deb.debian.org/debian bookworm/main amd64 bioperl all 1.7.8-1 [246 kB] Get:61 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get:62 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get:63 http://deb.debian.org/debian bookworm/main amd64 libaom3 amd64 3.6.0-1 [1851 kB] Get:64 http://deb.debian.org/debian bookworm/main amd64 libdav1d6 amd64 1.0.0-2+deb12u1 [513 kB] Get:65 http://deb.debian.org/debian bookworm/main amd64 libabsl20220623 amd64 20220623.1-1 [391 kB] Get:66 http://deb.debian.org/debian bookworm/main amd64 libgav1-1 amd64 0.18.0-1+b1 [332 kB] Get:67 http://deb.debian.org/debian bookworm/main amd64 librav1e0 amd64 0.5.1-6 [763 kB] Get:68 http://deb.debian.org/debian bookworm/main amd64 libsvtav1enc1 amd64 1.4.1+dfsg-1 [2121 kB] Get:69 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get:70 http://deb.debian.org/debian bookworm/main amd64 libyuv0 amd64 0.0~git20230123.b2528b0-1 [168 kB] Get:71 http://deb.debian.org/debian bookworm/main amd64 libavif15 amd64 0.11.1-1 [93.8 kB] Get:72 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get:73 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-5+deb12u3 [398 kB] Get:74 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get:75 http://deb.debian.org/debian bookworm/main amd64 libde265-0 amd64 1.0.11-1+deb12u2 [185 kB] Get:76 http://deb.debian.org/debian bookworm/main amd64 libnuma1 amd64 2.0.16-1 [21.0 kB] Get:77 http://deb.debian.org/debian bookworm/main amd64 libx265-199 amd64 3.5-2+b1 [1150 kB] Get:78 http://deb.debian.org/debian bookworm/main amd64 libheif1 amd64 1.15.1-1 [215 kB] Get:79 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get:80 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get:81 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get:82 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.2+deb12u1 [286 kB] Get:83 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-6+deb12u1 [316 kB] Get:84 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:85 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get:86 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:87 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:88 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2+deb12u2 [292 kB] Get:89 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2+deb12u2 [760 kB] Get:90 http://deb.debian.org/debian bookworm/main amd64 libxpm4 amd64 1:3.5.12-1.1+deb12u1 [48.6 kB] Get:91 http://deb.debian.org/debian bookworm/main amd64 libgd3 amd64 2.3.3-9 [124 kB] Get:92 http://deb.debian.org/debian bookworm/main amd64 libgd-perl amd64 2.76-4+b1 [132 kB] Get:93 http://deb.debian.org/debian bookworm/main amd64 libdevel-symdump-perl all 2.18-5 [15.8 kB] Get:94 http://deb.debian.org/debian bookworm/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:95 http://deb.debian.org/debian bookworm/main amd64 liburi-perl all 5.17-1 [90.4 kB] Get:96 http://deb.debian.org/debian bookworm/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:97 http://deb.debian.org/debian bookworm/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:98 http://deb.debian.org/debian bookworm/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:99 http://deb.debian.org/debian bookworm/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:100 http://deb.debian.org/debian bookworm/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:101 http://deb.debian.org/debian bookworm/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:102 http://deb.debian.org/debian bookworm/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:103 http://deb.debian.org/debian bookworm/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:104 http://deb.debian.org/debian bookworm/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:105 http://deb.debian.org/debian bookworm/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:106 http://deb.debian.org/debian bookworm/main amd64 libhttp-message-perl all 6.44-1 [81.7 kB] Get:107 http://deb.debian.org/debian bookworm/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:108 http://deb.debian.org/debian bookworm/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:109 http://deb.debian.org/debian bookworm/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:110 http://deb.debian.org/debian bookworm/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:111 http://deb.debian.org/debian bookworm/main amd64 libio-socket-ssl-perl all 2.081-2 [219 kB] Get:112 http://deb.debian.org/debian bookworm/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:113 http://deb.debian.org/debian bookworm/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:114 http://deb.debian.org/debian bookworm/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:115 http://deb.debian.org/debian bookworm/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:116 http://deb.debian.org/debian bookworm/main amd64 libwww-perl all 6.68-1 [186 kB] Get:117 http://deb.debian.org/debian bookworm/main amd64 libapache2-mod-perl2 amd64 2.0.12-1+b2 [879 kB] Get:118 http://deb.debian.org/debian bookworm/main amd64 libdbi-perl amd64 1.643-4 [773 kB] Get:119 http://deb.debian.org/debian bookworm/main amd64 libapache-dbi-perl all 1.12-3 [48.5 kB] Get:120 http://deb.debian.org/debian bookworm/main amd64 libbio-db-biofetch-perl all 1.7.3-4 [17.5 kB] Get:121 http://deb.debian.org/debian bookworm/main amd64 libcgi-pm-perl all 4.55-1 [220 kB] Get:122 http://deb.debian.org/debian bookworm/main amd64 libbio-db-gff-perl all 1.7.4-1 [273 kB] Get:123 http://deb.debian.org/debian bookworm/main amd64 libpq5 amd64 15.7-0+deb12u1 [188 kB] Get:124 http://deb.debian.org/debian bookworm/main amd64 libdbd-pg-perl amd64 3.16.0-2 [209 kB] Get:125 http://deb.debian.org/debian bookworm/main amd64 libdbd-sqlite3-perl amd64 1.72-1 [179 kB] Get:126 http://deb.debian.org/debian bookworm/main amd64 libbio-db-seqfeature-perl all 1.7.4-2 [169 kB] Get:127 http://deb.debian.org/debian bookworm/main amd64 libbio-graphics-perl all 2.40-6 [610 kB] Get:128 http://deb.debian.org/debian bookworm/main amd64 libbio-coordinate-perl all 1.7.1-4 [56.7 kB] Get:129 http://deb.debian.org/debian bookworm/main amd64 libcgi-session-perl all 4.48-4 [118 kB] Get:130 http://deb.debian.org/debian bookworm/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get:131 http://deb.debian.org/debian bookworm/main amd64 libexporter-tiny-perl all 1.006000-1 [38.6 kB] Get:132 http://deb.debian.org/debian bookworm/main amd64 liblist-moreutils-xs-perl amd64 0.430-3+b1 [42.1 kB] Get:133 http://deb.debian.org/debian bookworm/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:134 http://deb.debian.org/debian bookworm/main amd64 libstatistics-descriptive-perl all 3.0800-1 [65.6 kB] Get:135 http://deb.debian.org/debian bookworm/main amd64 libhttp-daemon-perl all 6.16-1 [23.5 kB] Get:136 http://deb.debian.org/debian bookworm/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:137 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:138 http://deb.debian.org/debian bookworm/main amd64 sqlite3 amd64 3.40.1-2 [353 kB] Get:139 http://deb.debian.org/debian bookworm/main amd64 libjs-prototype all 1.7.3-1 [44.3 kB] Get:140 http://deb.debian.org/debian bookworm/main amd64 libjs-scriptaculous all 1.9.0-3 [110 kB] Get:141 http://deb.debian.org/debian bookworm/main amd64 libanyevent-perl amd64 7.170-2+b3 [394 kB] Get:142 http://deb.debian.org/debian bookworm/main amd64 libanyevent-cachedns-perl all 0.08-3 [7708 B] Get:143 http://deb.debian.org/debian bookworm/main amd64 libcommon-sense-perl amd64 3.75-3 [23.0 kB] Get:144 http://deb.debian.org/debian bookworm/main amd64 libanyevent-http-perl all 2.25-2 [35.2 kB] Get:145 http://deb.debian.org/debian bookworm/main amd64 libstring-approx-perl amd64 3.28-2+b1 [38.9 kB] Get:146 http://deb.debian.org/debian bookworm/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:147 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:148 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:149 http://deb.debian.org/debian bookworm/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:150 http://deb.debian.org/debian bookworm/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:151 http://deb.debian.org/debian bookworm/main amd64 libvm-ec2-perl all 1.28-4 [760 kB] Get:152 http://deb.debian.org/debian bookworm/main amd64 gbrowse all 2.56+dfsg-11 [2375 kB] Get:153 http://deb.debian.org/debian bookworm/main amd64 gbrowse-calign amd64 2.56+dfsg-11+b1 [35.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 54.2 MB in 1s (93.4 MB/s) Selecting previously unselected package perl-modules-5.36. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6093 files and directories currently installed.) Preparing to unpack .../000-perl-modules-5.36_5.36.0-7+deb12u1_all.deb ... Unpacking perl-modules-5.36 (5.36.0-7+deb12u1) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../001-libgdbm6_1.23-3_amd64.deb ... Unpacking libgdbm6:amd64 (1.23-3) ... Selecting previously unselected package libgdbm-compat4:amd64. 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Selecting previously unselected package libxpm4:amd64. Preparing to unpack .../089-libxpm4_1%3a3.5.12-1.1+deb12u1_amd64.deb ... Unpacking libxpm4:amd64 (1:3.5.12-1.1+deb12u1) ... Selecting previously unselected package libgd3:amd64. Preparing to unpack .../090-libgd3_2.3.3-9_amd64.deb ... Unpacking libgd3:amd64 (2.3.3-9) ... Selecting previously unselected package libgd-perl. Preparing to unpack .../091-libgd-perl_2.76-4+b1_amd64.deb ... Unpacking libgd-perl (2.76-4+b1) ... Selecting previously unselected package libdevel-symdump-perl. Preparing to unpack .../092-libdevel-symdump-perl_2.18-5_all.deb ... Unpacking libdevel-symdump-perl (2.18-5) ... Selecting previously unselected package libregexp-ipv6-perl. Preparing to unpack .../093-libregexp-ipv6-perl_0.03-3_all.deb ... Unpacking libregexp-ipv6-perl (0.03-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../094-liburi-perl_5.17-1_all.deb ... Unpacking liburi-perl (5.17-1) ... 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Unpacking libhtml-parser-perl:amd64 (3.81-1) ... Selecting previously unselected package libhtml-tree-perl. Preparing to unpack .../101-libhtml-tree-perl_5.07-3_all.deb ... Unpacking libhtml-tree-perl (5.07-3) ... Selecting previously unselected package libclone-perl:amd64. Preparing to unpack .../102-libclone-perl_0.46-1_amd64.deb ... Unpacking libclone-perl:amd64 (0.46-1) ... Selecting previously unselected package libio-html-perl. Preparing to unpack .../103-libio-html-perl_1.004-3_all.deb ... Unpacking libio-html-perl (1.004-3) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../104-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../105-libhttp-message-perl_6.44-1_all.deb ... Unpacking libhttp-message-perl (6.44-1) ... Selecting previously unselected package libhttp-cookies-perl. 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Unpacking libnet-http-perl (6.22-1) ... Selecting previously unselected package liblwp-protocol-https-perl. Preparing to unpack .../112-liblwp-protocol-https-perl_6.10-1_all.deb ... Unpacking liblwp-protocol-https-perl (6.10-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../113-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libwww-robotrules-perl. Preparing to unpack .../114-libwww-robotrules-perl_6.02-1_all.deb ... Unpacking libwww-robotrules-perl (6.02-1) ... Selecting previously unselected package libwww-perl. Preparing to unpack .../115-libwww-perl_6.68-1_all.deb ... Unpacking libwww-perl (6.68-1) ... Selecting previously unselected package libapache2-mod-perl2. Preparing to unpack .../116-libapache2-mod-perl2_2.0.12-1+b2_amd64.deb ... Unpacking libapache2-mod-perl2 (2.0.12-1+b2) ... Selecting previously unselected package libdbi-perl:amd64. 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Selecting previously unselected package libdbd-pg-perl. Preparing to unpack .../123-libdbd-pg-perl_3.16.0-2_amd64.deb ... Unpacking libdbd-pg-perl (3.16.0-2) ... Selecting previously unselected package libdbd-sqlite3-perl:amd64. Preparing to unpack .../124-libdbd-sqlite3-perl_1.72-1_amd64.deb ... Unpacking libdbd-sqlite3-perl:amd64 (1.72-1) ... Selecting previously unselected package libbio-db-seqfeature-perl. Preparing to unpack .../125-libbio-db-seqfeature-perl_1.7.4-2_all.deb ... Unpacking libbio-db-seqfeature-perl (1.7.4-2) ... Selecting previously unselected package libbio-graphics-perl. Preparing to unpack .../126-libbio-graphics-perl_2.40-6_all.deb ... Unpacking libbio-graphics-perl (2.40-6) ... Selecting previously unselected package libbio-coordinate-perl. Preparing to unpack .../127-libbio-coordinate-perl_1.7.1-4_all.deb ... Unpacking libbio-coordinate-perl (1.7.1-4) ... Selecting previously unselected package libcgi-session-perl. 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Selecting previously unselected package libvm-ec2-perl. Preparing to unpack .../150-libvm-ec2-perl_1.28-4_all.deb ... Unpacking libvm-ec2-perl (1.28-4) ... Selecting previously unselected package gbrowse. Preparing to unpack .../151-gbrowse_2.56+dfsg-11_all.deb ... Unpacking gbrowse (2.56+dfsg-11) ... Selecting previously unselected package gbrowse-calign:amd64. Preparing to unpack .../152-gbrowse-calign_2.56+dfsg-11+b1_amd64.deb ... Unpacking gbrowse-calign:amd64 (2.56+dfsg-11+b1) ... Setting up libexpat1:amd64 (2.5.0-1) ... Setting up media-types (10.0.0) ... Setting up libaom3:amd64 (3.6.0-1) ... Setting up libabsl20220623:amd64 (20220623.1-1) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libkeyutils1:amd64 (1.6.3-2) ... Setting up libpsl5:amd64 (0.21.2-1) ... Setting up libicu72:amd64 (72.1-3) ... Setting up liblerc4:amd64 (4.0.0+ds-2) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up libsqlite3-0:amd64 (3.40.1-2) ... Setting up libssl3:amd64 (3.0.13-1~deb12u1) ... Setting up libnghttp2-14:amd64 (1.52.0-1+deb12u1) ... Setting up libdeflate0:amd64 (1.14-1) ... Setting up libapr1:amd64 (1.7.2-3) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libsvtav1enc1:amd64 (1.4.1+dfsg-1) ... Setting up libjbig0:amd64 (2.1-6.1) ... Setting up librav1e0:amd64 (0.5.1-6) ... Setting up libjansson4:amd64 (2.14-2) ... Setting up libkrb5support0:amd64 (1.20.1-2+deb12u1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Setting up perl-modules-5.36 (5.36.0-7+deb12u1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-2) ... Setting up libx11-data (2:1.8.4-2+deb12u2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libproc2-0:amd64 (2:4.0.2-3) ... Setting up libpng16-16:amd64 (1.6.39-2) ... Setting up fonts-dejavu-core (2.37-6) ... Setting up libgav1-1:amd64 (0.18.0-1+b1) ... Setting up libncursesw6:amd64 (6.4-4) ... Setting up libk5crypto3:amd64 (1.20.1-2+deb12u1) ... Setting up libjs-prototype (1.7.3-1) ... Setting up libdav1d6:amd64 (1.0.0-2+deb12u1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libwebp7:amd64 (1.2.4-0.2+deb12u1) ... Setting up libnuma1:amd64 (2.0.16-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libtiff6:amd64 (4.5.0-6+deb12u1) ... Setting up liblua5.3-0:amd64 (5.3.6-2) ... Setting up procps (2:4.0.2-3) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up netbase (6.4) ... Setting up libkrb5-3:amd64 (1.20.1-2+deb12u1) ... Setting up apache2-data (2.4.59-1~deb12u1) ... Setting up libde265-0:amd64 (1.0.11-1+deb12u2) ... Setting up openssl (3.0.13-1~deb12u1) ... Setting up libbsd0:amd64 (0.11.7-2) ... Setting up libyuv0:amd64 (0.0~git20230123.b2528b0-1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... Setting up libgdbm6:amd64 (1.23-3) ... Setting up libaprutil1:amd64 (1.6.3-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up libavif15:amd64 (0.11.1-1) ... Setting up fontconfig-config (2.14.1-4) ... Setting up libjs-scriptaculous (1.9.0-3) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.6.3-1) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libfreetype6:amd64 (2.12.1+dfsg-5+deb12u3) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-2+deb12u1) ... Setting up libgdbm-compat4:amd64 (1.23-3) ... Setting up ucf (3.0043+nmu1) ... Setting up libx265-199:amd64 (3.5-2+b1) ... Setting up libcurl4:amd64 (7.88.1-10+deb12u6) ... Setting up libx11-6:amd64 (2:1.8.4-2+deb12u2) ... Setting up libfontconfig1:amd64 (2.14.1-4) ... Setting up libperl5.36:amd64 (5.36.0-7+deb12u1) ... Setting up sqlite3 (3.40.1-2) ... Setting up apache2-utils (2.4.59-1~deb12u1) ... Setting up libxpm4:amd64 (1:3.5.12-1.1+deb12u1) ... Setting up libheif1:amd64 (1.15.1-1) ... Setting up libpq5:amd64 (15.7-0+deb12u1) ... Setting up libaprutil1-ldap:amd64 (1.6.3-1) ... Setting up perl (5.36.0-7+deb12u1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libgd3:amd64 (2.3.3-9) ... Setting up libio-html-perl (1.004-3) ... Setting up liblist-moreutils-xs-perl (0.430-3+b1) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libjson-perl (4.10000-1) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libdevel-symdump-perl (2.18-5) ... Setting up libexporter-tiny-perl (1.006000-1) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up liburi-perl (5.17-1) ... Setting up libdbi-perl:amd64 (1.643-4) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libanyevent-perl (7.170-2+b3) ... Setting up libstring-approx-perl (3.28-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libtest-deep-perl (1.204-1) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up libcommon-sense-perl:amd64 (3.75-3) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libnet-http-perl (6.22-1) ... Setting up libanyevent-http-perl (2.25-2) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libdbd-pg-perl (3.16.0-2) ... Setting up libexception-class-perl (1.45-1) ... Setting up apache2-bin (2.4.59-1~deb12u1) ... Setting up libgd-perl (2.76-4+b1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libtest-exception-perl (0.43-3) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libanyevent-cachedns-perl (0.08-3) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up libdbd-sqlite3-perl:amd64 (1.72-1) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up libio-socket-ssl-perl (2.081-2) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libstatistics-descriptive-perl (3.0800-1) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up apache2 (2.4.59-1~deb12u1) ... Enabling module mpm_event. Enabling module authz_core. Enabling module authz_host. Enabling module authn_core. Enabling module auth_basic. Enabling module access_compat. Enabling module authn_file. Enabling module authz_user. Enabling module alias. Enabling module dir. Enabling module autoindex. Enabling module env. Enabling module mime. Enabling module negotiation. Enabling module setenvif. Enabling module filter. Enabling module deflate. Enabling module status. Enabling module reqtimeout. Enabling conf charset. Enabling conf localized-error-pages. Enabling conf other-vhosts-access-log. Enabling conf security. Enabling conf serve-cgi-bin. Enabling site 000-default. invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libcgi-pm-perl (4.55-1) ... Setting up libtest-differences-perl (0.69-1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libcgi-session-perl (4.48-4) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libhttp-daemon-perl (6.16-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up bioperl (1.7.8-1) ... Setting up libbio-coordinate-perl (1.7.1-4) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up libwww-perl (6.68-1) ... Setting up libapache2-mod-perl2 (2.0.12-1+b2) ... apache2_invoke: Enable module perl invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libbio-db-biofetch-perl (1.7.3-4) ... Setting up libvm-ec2-perl (1.28-4) ... Setting up libapache-dbi-perl (1.12-3) ... Setting up libbio-db-gff-perl (1.7.4-1) ... Setting up libbio-db-seqfeature-perl (1.7.4-2) ... Setting up libbio-graphics-perl (2.40-6) ... Setting up gbrowse (2.56+dfsg-11) ... apache2_invoke: Enable configuration gbrowse invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of reload. Setting up gbrowse-calign:amd64 (2.56+dfsg-11+b1) ... Processing triggers for libc-bin (2.36-9+deb12u7) ... Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m19.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-y', 'install', 'gbrowse-calign'] 0m19.3s INFO: Running scripts post_install 0m19.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_install_exceptions'] 0m19.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_install_exceptions'] 0m19.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m20.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m20.2s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp05b24prf to bookworm-next 0m20.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main deb http://security.debian.org bookworm-security main deb http://deb.debian.org/debian/ bookworm-updates main deb http://deb.debian.org/debian/ bookworm-proposed-updates main 0m20.2s INFO: Running scripts pre_distupgrade 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_exceptions'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_exceptions'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', 'update'] 0m21.8s DUMP: Get:1 http://security.debian.org bookworm-security InRelease [48.0 kB] Hit:2 http://deb.debian.org/debian bookworm InRelease Get:3 http://deb.debian.org/debian bookworm-updates InRelease [55.4 kB] Get:4 http://deb.debian.org/debian bookworm-proposed-updates InRelease [59.5 kB] Get:5 http://security.debian.org bookworm-security/main amd64 Packages [176 kB] Get:6 http://security.debian.org bookworm-security/main Translation-en [106 kB] Get:7 http://deb.debian.org/debian bookworm-updates/main amd64 Packages [13.8 kB] Get:8 http://deb.debian.org/debian bookworm-updates/main Translation-en [16.0 kB] Get:9 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 Packages [108 kB] Get:10 http://deb.debian.org/debian bookworm-proposed-updates/main Translation-en [62.5 kB] Fetched 645 kB in 1s (971 kB/s) Reading package lists... 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', 'update'] 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-yf', 'dist-upgrade'] 0m25.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apache2 apache2-bin apache2-data apache2-utils libaom3 libc-bin libc6 libgssapi-krb5-2 libk5crypto3 libkrb5-3 libkrb5support0 libpq5 libssl3 libsystemd0 libudev1 openssl 16 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 11.8 MB of archives. After this operation, 19.5 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 libc6 amd64 2.36-9+deb12u8 [2754 kB] Get:2 http://security.debian.org bookworm-security/main amd64 libaom3 amd64 3.6.0-1+deb12u1 [1851 kB] Get:3 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 libc-bin amd64 2.36-9+deb12u8 [608 kB] Get:4 http://security.debian.org bookworm-security/main amd64 libgssapi-krb5-2 amd64 1.20.1-2+deb12u2 [135 kB] Get:5 http://security.debian.org bookworm-security/main amd64 libkrb5-3 amd64 1.20.1-2+deb12u2 [332 kB] Get:6 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 libssl3 amd64 3.0.13-1~deb12u2 [2023 kB] Get:7 http://security.debian.org bookworm-security/main amd64 libkrb5support0 amd64 1.20.1-2+deb12u2 [32.6 kB] Get:8 http://security.debian.org bookworm-security/main amd64 libk5crypto3 amd64 1.20.1-2+deb12u2 [78.7 kB] Get:9 http://security.debian.org bookworm-security/main amd64 libpq5 amd64 15.8-0+deb12u1 [188 kB] Get:10 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 apache2 amd64 2.4.62-1~deb12u1 [223 kB] Get:11 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 apache2-bin amd64 2.4.62-1~deb12u1 [1385 kB] Get:12 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 apache2-data all 2.4.62-1~deb12u1 [160 kB] Get:13 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 apache2-utils amd64 2.4.62-1~deb12u1 [210 kB] Get:14 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 libsystemd0 amd64 252.29-1~deb12u1 [332 kB] Get:15 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 libudev1 amd64 252.29-1~deb12u1 [108 kB] Get:16 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 openssl amd64 3.0.13-1~deb12u2 [1421 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 11.8 MB in 0s (111 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15186 files and directories currently installed.) Preparing to unpack .../libc6_2.36-9+deb12u8_amd64.deb ... Unpacking libc6:amd64 (2.36-9+deb12u8) over (2.36-9+deb12u7) ... Setting up libc6:amd64 (2.36-9+deb12u8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15186 files and directories currently installed.) Preparing to unpack .../libc-bin_2.36-9+deb12u8_amd64.deb ... Unpacking libc-bin (2.36-9+deb12u8) over (2.36-9+deb12u7) ... Setting up libc-bin (2.36-9+deb12u8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15186 files and directories currently installed.) Preparing to unpack .../0-libssl3_3.0.13-1~deb12u2_amd64.deb ... Unpacking libssl3:amd64 (3.0.13-1~deb12u2) over (3.0.13-1~deb12u1) ... Preparing to unpack .../1-apache2_2.4.62-1~deb12u1_amd64.deb ... Unpacking apache2 (2.4.62-1~deb12u1) over (2.4.59-1~deb12u1) ... Preparing to unpack .../2-apache2-bin_2.4.62-1~deb12u1_amd64.deb ... Unpacking apache2-bin (2.4.62-1~deb12u1) over (2.4.59-1~deb12u1) ... Preparing to unpack .../3-apache2-data_2.4.62-1~deb12u1_all.deb ... Unpacking apache2-data (2.4.62-1~deb12u1) over (2.4.59-1~deb12u1) ... Preparing to unpack .../4-apache2-utils_2.4.62-1~deb12u1_amd64.deb ... Unpacking apache2-utils (2.4.62-1~deb12u1) over (2.4.59-1~deb12u1) ... Preparing to unpack .../5-libsystemd0_252.29-1~deb12u1_amd64.deb ... Unpacking libsystemd0:amd64 (252.29-1~deb12u1) over (252.26-1~deb12u2) ... Setting up libsystemd0:amd64 (252.29-1~deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15186 files and directories currently installed.) Preparing to unpack .../libudev1_252.29-1~deb12u1_amd64.deb ... Unpacking libudev1:amd64 (252.29-1~deb12u1) over (252.26-1~deb12u2) ... Setting up libudev1:amd64 (252.29-1~deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15186 files and directories currently installed.) Preparing to unpack .../0-libaom3_3.6.0-1+deb12u1_amd64.deb ... Unpacking libaom3:amd64 (3.6.0-1+deb12u1) over (3.6.0-1) ... Preparing to unpack .../1-libgssapi-krb5-2_1.20.1-2+deb12u2_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-2+deb12u2) over (1.20.1-2+deb12u1) ... Preparing to unpack .../2-libkrb5-3_1.20.1-2+deb12u2_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-2+deb12u2) over (1.20.1-2+deb12u1) ... Preparing to unpack .../3-libkrb5support0_1.20.1-2+deb12u2_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-2+deb12u2) over (1.20.1-2+deb12u1) ... Preparing to unpack .../4-libk5crypto3_1.20.1-2+deb12u2_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-2+deb12u2) over (1.20.1-2+deb12u1) ... Preparing to unpack .../5-libpq5_15.8-0+deb12u1_amd64.deb ... Unpacking libpq5:amd64 (15.8-0+deb12u1) over (15.7-0+deb12u1) ... Preparing to unpack .../6-openssl_3.0.13-1~deb12u2_amd64.deb ... Unpacking openssl (3.0.13-1~deb12u2) over (3.0.13-1~deb12u1) ... Setting up libaom3:amd64 (3.6.0-1+deb12u1) ... Setting up libssl3:amd64 (3.0.13-1~deb12u2) ... Setting up apache2-bin (2.4.62-1~deb12u1) ... Setting up libkrb5support0:amd64 (1.20.1-2+deb12u2) ... Setting up libk5crypto3:amd64 (1.20.1-2+deb12u2) ... Setting up libkrb5-3:amd64 (1.20.1-2+deb12u2) ... Setting up apache2-data (2.4.62-1~deb12u1) ... Setting up openssl (3.0.13-1~deb12u2) ... Setting up apache2-utils (2.4.62-1~deb12u1) ... Setting up apache2 (2.4.62-1~deb12u1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libgssapi-krb5-2:amd64 (1.20.1-2+deb12u2) ... Setting up libpq5:amd64 (15.8-0+deb12u1) ... Processing triggers for libc-bin (2.36-9+deb12u8) ... 0m25.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-yf', 'dist-upgrade'] 0m25.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m26.2s DUMP: 8d734360ea7c957ed98a0e4620f217b3 - 0m26.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m26.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 0m26.5s DUMP: Package: gbrowse-calign Source: gbrowse (2.56+dfsg-11) Version: 2.56+dfsg-11+b1 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.36.0-4), perlapi-5.36.0, libc6 (>= 2.4), gbrowse Description-en: CAlign helper Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). . This package provides the CAlign helper for use with Realign. It speeds up Smith-Waterman alignment. Description-md5: 52106883c9df300bab833de801839ea2 Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-11+b1_amd64.deb Size: 35356 MD5sum: e7cebff2c3a2b818557e9220cd0589fa SHA256: cc4c3b3d2032f45907a7e739a3707a4b0ed4aab012a1778dcba030689458bc77 0m26.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 0m26.5s INFO: apt-cache knows about the following packages: gbrowse-calign 0m26.5s INFO: Running scripts pre_install 0m26.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_database-server'] 0m26.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_database-server'] 0m26.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_exceptions'] 0m26.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_exceptions'] 0m26.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_extras'] 0m26.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_extras'] 0m26.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture'] 0m26.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture'] 0m26.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m26.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m26.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy'] 0m26.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 Packages release v=12-updates,o=Debian,a=proposed-updates,n=bookworm-proposed-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian bookworm-updates/main amd64 Packages release v=12-updates,o=Debian,a=stable-updates,n=bookworm-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://security.debian.org bookworm-security/main amd64 Packages release v=12,o=Debian,a=stable-security,n=bookworm-security,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian bookworm/main amd64 Packages release v=12.6,o=Debian,a=stable,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m26.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy'] 0m26.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy', 'gbrowse-calign'] 0m26.7s DUMP: gbrowse-calign: Installed: 2.56+dfsg-11+b1 Candidate: 2.56+dfsg-11+b1 Version table: *** 2.56+dfsg-11+b1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 100 /var/lib/dpkg/status 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy', 'gbrowse-calign'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-y', 'install', 'gbrowse-calign'] 0m27.3s DUMP: Reading package lists... Building dependency tree... Reading state information... gbrowse-calign is already the newest version (2.56+dfsg-11+b1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m27.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-y', 'install', 'gbrowse-calign'] 0m27.3s INFO: Running scripts post_install 0m27.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_install_exceptions'] 0m27.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_install_exceptions'] 0m27.3s INFO: Running scripts post_distupgrade 0m27.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m27.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m27.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_exceptions'] 0m27.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_exceptions'] 0m27.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m27.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m27.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m27.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m27.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_zz_backports'] 0m27.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_distupgrade_zz_backports'] 0m27.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m28.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m28.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m29.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m29.5s INFO: Running scripts pre_install 0m29.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_database-server'] 0m29.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_database-server'] 0m29.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_exceptions'] 0m29.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_exceptions'] 0m29.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_extras'] 0m29.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_extras'] 0m29.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy'] 0m29.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm-proposed-updates/main amd64 Packages release v=12-updates,o=Debian,a=proposed-updates,n=bookworm-proposed-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian bookworm-updates/main amd64 Packages release v=12-updates,o=Debian,a=stable-updates,n=bookworm-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://security.debian.org bookworm-security/main amd64 Packages release v=12,o=Debian,a=stable-security,n=bookworm-security,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian bookworm/main amd64 Packages release v=12.6,o=Debian,a=stable,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy', 'gbrowse-calign'] 0m29.6s DUMP: gbrowse-calign: Installed: 2.56+dfsg-11+b1 Candidate: 2.56+dfsg-11+b1 Version table: *** 2.56+dfsg-11+b1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 100 /var/lib/dpkg/status 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-cache', 'policy', 'gbrowse-calign'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-y', 'install', 'gbrowse-calign=2.56+dfsg-11+b1'] 0m30.0s DUMP: Reading package lists... Building dependency tree... Reading state information... gbrowse-calign is already the newest version (2.56+dfsg-11+b1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m30.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', '-y', 'install', 'gbrowse-calign=2.56+dfsg-11+b1'] 0m30.0s INFO: Running scripts post_install 0m30.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_install_exceptions'] 0m30.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_install_exceptions'] 0m30.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m31.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m31.4s DEBUG: No file moved between /{bin|sbin|lib*} and /usr/{bin|sbin|lib*}. 0m31.4s INFO: /bin converted to /usr/bin by /usr merge 0m31.4s INFO: /lib converted to /usr/lib by /usr merge 0m31.4s INFO: /lib/init converted to /usr/lib/init by /usr merge 0m31.4s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 0m31.4s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 0m31.4s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 0m31.4s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 0m31.4s INFO: /lib/terminfo converted to /usr/lib/terminfo by /usr merge 0m31.4s INFO: /lib/terminfo/E converted to /usr/lib/terminfo/E by /usr merge 0m31.4s INFO: /lib/terminfo/a converted to /usr/lib/terminfo/a by /usr merge 0m31.4s INFO: /lib/terminfo/c converted to /usr/lib/terminfo/c by /usr merge 0m31.4s INFO: /lib/terminfo/d converted to /usr/lib/terminfo/d by /usr merge 0m31.4s INFO: /lib/terminfo/h converted to /usr/lib/terminfo/h by /usr merge 0m31.4s INFO: /lib/terminfo/l converted to /usr/lib/terminfo/l by /usr merge 0m31.4s INFO: /lib/terminfo/m converted to /usr/lib/terminfo/m by /usr merge 0m31.4s INFO: /lib/terminfo/p converted to /usr/lib/terminfo/p by /usr merge 0m31.4s INFO: /lib/terminfo/r converted to /usr/lib/terminfo/r by /usr merge 0m31.4s INFO: /lib/terminfo/s converted to /usr/lib/terminfo/s by /usr merge 0m31.4s INFO: /lib/terminfo/t converted to /usr/lib/terminfo/t by /usr merge 0m31.4s INFO: /lib/terminfo/v converted to /usr/lib/terminfo/v by /usr merge 0m31.4s INFO: /lib/terminfo/w converted to /usr/lib/terminfo/w by /usr merge 0m31.4s INFO: /lib/terminfo/x converted to /usr/lib/terminfo/x by /usr merge 0m31.4s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 0m31.4s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 0m31.4s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 0m31.4s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 0m31.4s INFO: /lib64 converted to /usr/lib64 by /usr merge 0m31.4s INFO: /sbin converted to /usr/sbin by /usr merge 0m32.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp05b24prf', '-ac', '--ignore-obsolete'] 0m34.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp05b24prf', '-ac', '--ignore-obsolete'] 0m34.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m34.1s DUMP: 0.15.6 0m34.1s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m34.1s INFO: Running adequate version 0.15.6 now. 0m34.1s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'gbrowse-calign'] 0m34.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'gbrowse-calign'] 0m34.1s INFO: Running scripts pre_remove 0m34.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m34.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m34.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m34.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m34.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m37.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m37.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m38.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m38.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m38.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m38.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_exceptions'] 0m38.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/pre_remove_exceptions'] 0m38.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m38.1s DUMP: install ok installed adduser adduser 3.134 install ok installed apache2 apache2 2.4.62-1~deb12u1 install ok installed apache2-bin apache2-bin 2.4.62-1~deb12u1 install ok installed apache2-data apache2-data 2.4.62-1~deb12u1 install ok installed apache2-utils apache2-utils 2.4.62-1~deb12u1 install ok installed apt apt 2.6.1 install ok installed base-files base-files 12.4+deb12u6 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2+b7 install ok installed bioperl bioperl 1.7.8-1 install ok installed bsdutils bsdutils 1:2.38.1-5+deb12u1 install ok installed ca-certificates ca-certificates 20230311 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-2 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2023.3+deb12u1 install ok installed debianutils debianutils 5.7-0.5~deb12u1 install ok installed diffutils diffutils 1:3.8-4 install ok installed dpkg dpkg 1.21.22 install ok installed e2fsprogs e2fsprogs 1.47.0-2 install ok installed findutils findutils 4.9.0-4 install ok installed fontconfig-config fontconfig-config 2.14.1-4 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-6 install ok installed gbrowse gbrowse 2.56+dfsg-11 install ok installed gbrowse-calign:amd64 gbrowse-calign 2.56+dfsg-11+b1 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14 install ok installed gpgv gpgv 2.2.40-1.1 install ok installed grep grep 3.8-5 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libabsl20220623:amd64 libabsl20220623 20220623.1-1 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libalgorithm-diff-perl libalgorithm-diff-perl 1.201-1 install ok installed libanyevent-cachedns-perl libanyevent-cachedns-perl 0.08-3 install ok installed libanyevent-http-perl libanyevent-http-perl 2.25-2 install ok installed libanyevent-perl libanyevent-perl 7.170-2+b3 install ok installed libaom3:amd64 libaom3 3.6.0-1+deb12u1 install ok installed libapache-dbi-perl libapache-dbi-perl 1.12-3 install ok installed libapache2-mod-perl2 libapache2-mod-perl2 2.0.12-1+b2 install ok installed libapr1:amd64 libapr1 1.7.2-3 install ok installed libaprutil1:amd64 libaprutil1 1.6.3-1 install ok installed libaprutil1-dbd-sqlite3:amd64 libaprutil1-dbd-sqlite3 1.6.3-1 install ok installed libaprutil1-ldap:amd64 libaprutil1-ldap 1.6.3-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.6.1 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.9-1 install ok installed libaudit1:amd64 libaudit1 1:3.0.9-1 install ok installed libavif15:amd64 libavif15 0.11.1-1 install ok installed libbio-coordinate-perl libbio-coordinate-perl 1.7.1-4 install ok installed libbio-db-biofetch-perl libbio-db-biofetch-perl 1.7.3-4 install ok installed libbio-db-gff-perl libbio-db-gff-perl 1.7.4-1 install ok installed libbio-db-seqfeature-perl libbio-db-seqfeature-perl 1.7.4-2 install ok installed libbio-graphics-perl libbio-graphics-perl 2.40-6 install ok installed libbio-perl-perl libbio-perl-perl 1.7.8-1 install ok installed libblkid1:amd64 libblkid1 2.38.1-5+deb12u1 install ok installed libbrotli1:amd64 libbrotli1 1.0.9-2+b6 install ok installed libbsd0:amd64 libbsd0 0.11.7-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-9+deb12u8 install ok installed libc6:amd64 libc6 2.36-9+deb12u8 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b3 install ok installed libcap2:amd64 libcap2 1:2.66-4 install ok installed libcapture-tiny-perl libcapture-tiny-perl 0.48-2 install ok installed libcgi-pm-perl libcgi-pm-perl 4.55-1 install ok installed libcgi-session-perl libcgi-session-perl 4.48-4 install ok installed libclass-data-inheritable-perl libclass-data-inheritable-perl 0.08-3 install ok installed libclone-perl:amd64 libclone-perl 0.46-1 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2 install ok installed libcommon-sense-perl:amd64 libcommon-sense-perl 3.75-3 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2 install ok installed libcurl4:amd64 libcurl4 7.88.1-10+deb12u6 install ok installed libdata-stag-perl libdata-stag-perl 0.14-3 install ok installed libdav1d6:amd64 libdav1d6 1.0.0-2+deb12u1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdbd-pg-perl libdbd-pg-perl 3.16.0-2 install ok installed libdbd-sqlite3-perl:amd64 libdbd-sqlite3-perl 1.72-1 install ok installed libdbi-perl:amd64 libdbi-perl 1.643-4 install ok installed libde265-0:amd64 libde265-0 1.0.11-1+deb12u2 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.270 install ok installed libdeflate0:amd64 libdeflate0 1.14-1 install ok installed libdevel-stacktrace-perl libdevel-stacktrace-perl 2.0400-2 install ok installed libdevel-symdump-perl libdevel-symdump-perl 2.18-5 install ok installed libencode-locale-perl libencode-locale-perl 1.05-3 install ok installed libexception-class-perl libexception-class-perl 1.45-1 install ok installed libexpat1:amd64 libexpat1 2.5.0-1 install ok installed libexporter-tiny-perl libexporter-tiny-perl 1.006000-1 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-listing-perl libfile-listing-perl 6.15-1 install ok installed libfontconfig1:amd64 libfontconfig1 2.14.1-4 install ok installed libfreetype6:amd64 libfreetype6 2.12.1+dfsg-5+deb12u3 install ok installed libgav1-1:amd64 libgav1-1 0.18.0-1+b1 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgd-perl libgd-perl 2.76-4+b1 install ok installed libgd3:amd64 libgd3 2.3.3-9 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.9-2+deb12u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.20.1-2+deb12u2 install ok installed libheif1:amd64 libheif1 1.15.1-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libhtml-parser-perl:amd64 libhtml-parser-perl 3.81-1 install ok installed libhtml-tagset-perl libhtml-tagset-perl 3.20-6 install ok installed libhtml-tree-perl libhtml-tree-perl 5.07-3 install ok installed libhttp-cookies-perl libhttp-cookies-perl 6.10-1 install ok installed libhttp-daemon-perl libhttp-daemon-perl 6.16-1 install ok installed libhttp-date-perl libhttp-date-perl 6.05-2 install ok installed libhttp-message-perl libhttp-message-perl 6.44-1 install ok installed libhttp-negotiate-perl libhttp-negotiate-perl 6.01-2 install ok installed libicu72:amd64 libicu72 72.1-3 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed libio-html-perl libio-html-perl 1.004-3 install ok installed libio-socket-ssl-perl libio-socket-ssl-perl 2.081-2 install ok installed libio-string-perl libio-string-perl 1.08-4 install ok installed libjansson4:amd64 libjansson4 2.14-2 install ok installed libjbig0:amd64 libjbig0 2.1-6.1 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-2 install ok installed libjs-prototype libjs-prototype 1.7.3-1 install ok installed libjs-scriptaculous libjs-scriptaculous 1.9.0-3 install ok installed libjson-perl libjson-perl 4.10000-1 install ok installed libk5crypto3:amd64 libk5crypto3 1.20.1-2+deb12u2 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.20.1-2+deb12u2 install ok installed libkrb5support0:amd64 libkrb5support0 1.20.1-2+deb12u2 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.13+dfsg-5 install ok installed liblerc4:amd64 liblerc4 4.0.0+ds-2 install ok installed liblist-moreutils-perl liblist-moreutils-perl 0.430-2 install ok installed liblist-moreutils-xs-perl liblist-moreutils-xs-perl 0.430-3+b1 install ok installed liblua5.3-0:amd64 liblua5.3-0 5.3.6-2 install ok installed liblwp-mediatypes-perl liblwp-mediatypes-perl 6.04-2 install ok installed liblwp-protocol-https-perl liblwp-protocol-https-perl 6.10-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.2 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-5+deb12u1 install ok installed libncursesw6:amd64 libncursesw6 6.4-4 install ok installed libnet-http-perl libnet-http-perl 6.22-1 install ok installed libnet-ssleay-perl:amd64 libnet-ssleay-perl 1.92-2+b1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.52.0-1+deb12u1 install ok installed libnuma1:amd64 libnuma1 2.0.16-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6+deb12u1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6+deb12u1 install ok installed libpam-runtime libpam-runtime 1.5.2-6+deb12u1 install ok installed libpam0g:amd64 libpam0g 1.5.2-6+deb12u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-7+deb12u1 install ok installed libpng16-16:amd64 libpng16-16 1.6.39-2 install ok installed libpq5:amd64 libpq5 15.8-0+deb12u1 install ok installed libproc2-0:amd64 libproc2-0 2:4.0.2-3 install ok installed libpsl5:amd64 libpsl5 0.21.2-1 install ok installed librav1e0:amd64 librav1e0 0.5.1-6 install ok installed libreadline8:amd64 libreadline8 8.2-1.3 install ok installed libregexp-ipv6-perl libregexp-ipv6-perl 0.03-3 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg-10 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg-10 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+deb12u1 install ok installed libselinux1:amd64 libselinux1 3.4-1+b6 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b5 install ok installed libsepol2:amd64 libsepol2 3.4-2.1 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-5+deb12u1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.40.1-2 install ok installed libss2:amd64 libss2 1.47.0-2 install ok installed libssh2-1:amd64 libssh2-1 1.10.0-3+b1 install ok installed libssl3:amd64 libssl3 3.0.13-1~deb12u2 install ok installed libstatistics-descriptive-perl libstatistics-descriptive-perl 3.0800-1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14 install ok installed libstring-approx-perl libstring-approx-perl 3.28-2+b1 install ok installed libsub-uplevel-perl libsub-uplevel-perl 0.2800-3 install ok installed libsvtav1enc1:amd64 libsvtav1enc1 1.4.1+dfsg-1 install ok installed libsystemd0:amd64 libsystemd0 252.29-1~deb12u1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libterm-readkey-perl libterm-readkey-perl 2.38-2+b1 install ok installed libtest-deep-perl libtest-deep-perl 1.204-1 install ok installed libtest-differences-perl libtest-differences-perl 0.69-1 install ok installed libtest-exception-perl libtest-exception-perl 0.43-3 install ok installed libtest-most-perl libtest-most-perl 0.38-1 install ok installed libtest-warn-perl libtest-warn-perl 0.37-2 install ok installed libtext-diff-perl libtext-diff-perl 1.45-2 install ok installed libtiff6:amd64 libtiff6 4.5.0-6+deb12u1 install ok installed libtimedate-perl libtimedate-perl 2.3300-2 install ok installed libtinfo6:amd64 libtinfo6 6.4-4 install ok installed libtry-tiny-perl libtry-tiny-perl 0.31-2 install ok installed libudev1:amd64 libudev1 252.29-1~deb12u1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed liburi-perl liburi-perl 5.17-1 install ok installed libuuid1:amd64 libuuid1 2.38.1-5+deb12u1 install ok installed libvm-ec2-perl libvm-ec2-perl 1.28-4 install ok installed libwebp7:amd64 libwebp7 1.2.4-0.2+deb12u1 install ok installed libwww-perl libwww-perl 6.68-1 install ok installed libwww-robotrules-perl libwww-robotrules-perl 6.02-1 install ok installed libx11-6:amd64 libx11-6 2:1.8.4-2+deb12u2 install ok installed libx11-data libx11-data 2:1.8.4-2+deb12u2 install ok installed libx265-199:amd64 libx265-199 3.5-2+b1 install ok installed libxau6:amd64 libxau6 1:1.0.9-1 install ok installed libxcb1:amd64 libxcb1 1.15-1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxml-libxml-perl libxml-libxml-perl 2.0207+dfsg+really+2.0134-1+b1 install ok installed libxml-namespacesupport-perl libxml-namespacesupport-perl 1.12-2 install ok installed libxml-sax-base-perl libxml-sax-base-perl 1.09-3 install ok installed libxml-sax-perl libxml-sax-perl 1.02+dfsg-3 install ok installed libxml-simple-perl libxml-simple-perl 2.25-2 install ok installed libxml2:amd64 libxml2 2.9.14+dfsg-1.3~deb12u1 install ok installed libxpm4:amd64 libxpm4 1:3.5.12-1.1+deb12u1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libyuv0:amd64 libyuv0 0.0~git20230123.b2528b0-1 install ok installed libzstd1:amd64 libzstd1 1.5.4+dfsg2-5 install ok installed login login 1:4.13+dfsg1-1+b1 install ok installed logsave logsave 1.47.0-2 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed media-types media-types 10.0.0 install ok installed mount mount 2.38.1-5+deb12u1 install ok installed ncurses-base ncurses-base 6.4-4 install ok installed ncurses-bin ncurses-bin 6.4-4 install ok installed netbase netbase 6.4 install ok installed openssl openssl 3.0.13-1~deb12u2 install ok installed passwd passwd 1:4.13+dfsg1-1+b1 install ok installed perl perl 5.36.0-7+deb12u1 install ok installed perl-base perl-base 5.36.0-7+deb12u1 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-7+deb12u1 install ok installed perl-openssl-defaults:amd64 perl-openssl-defaults 7+b1 install ok installed procps procps 2:4.0.2-3 install ok installed readline-common readline-common 8.2-1.3 install ok installed sed sed 4.9-1 install ok installed sensible-utils sensible-utils 0.0.17+nmu1 install ok installed sqlite3 sqlite3 3.40.1-2 install ok installed sysvinit-utils sysvinit-utils 3.06-4 install ok installed tar tar 1.34+dfsg-1.2+deb12u1 install ok installed tzdata tzdata 2024a-0+deb12u1 install ok installed ucf ucf 3.0043+nmu1 install ok installed usr-is-merged usr-is-merged 37~deb12u1 install ok installed util-linux util-linux 2.38.1-5+deb12u1 install ok installed util-linux-extra util-linux-extra 2.38.1-5+deb12u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m38.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m38.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', 'remove', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'bioperl', 'ca-certificates', 'fontconfig-config', 'fonts-dejavu-core', 'gbrowse', 'gbrowse-calign:amd64', 'libabsl20220623:amd64', 'libalgorithm-diff-perl', 'libanyevent-cachedns-perl', 'libanyevent-http-perl', 'libanyevent-perl', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libavif15:amd64', 'libbio-coordinate-perl', 'libbio-db-biofetch-perl', 'libbio-db-gff-perl', 'libbio-db-seqfeature-perl', 'libbio-graphics-perl', 'libbio-perl-perl', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcapture-tiny-perl', 'libcgi-pm-perl', 'libcgi-session-perl', 'libclass-data-inheritable-perl', 'libclone-perl:amd64', 'libcommon-sense-perl:amd64', 'libcurl4:amd64', 'libdata-stag-perl', 'libdav1d6:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libde265-0:amd64', 'libdeflate0:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libencode-locale-perl', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfile-listing-perl', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgav1-1:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgssapi-krb5-2:amd64', 'libheif1:amd64', 'libhtml-parser-perl:amd64', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libicu72:amd64', 'libio-html-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-prototype', 'libjs-scriptaculous', 'libjson-perl', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'liblua5.3-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'libncursesw6:amd64', 'libnet-http-perl', 'libnet-ssleay-perl:amd64', 'libnghttp2-14:amd64', 'libnuma1:amd64', 'libperl5.36:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libproc2-0:amd64', 'libpsl5:amd64', 'librav1e0:amd64', 'libreadline8:amd64', 'libregexp-ipv6-perl', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libstatistics-descriptive-perl', 'libstring-approx-perl', 'libsub-uplevel-perl', 'libsvtav1enc1:amd64', 'libterm-readkey-perl', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-warn-perl', 'libtext-diff-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtry-tiny-perl', 'liburi-perl', 'libvm-ec2-perl', 'libwebp7:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx265-199:amd64', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxml-libxml-perl', 'libxml-namespacesupport-perl', 'libxml-sax-base-perl', 'libxml-sax-perl', 'libxml-simple-perl', 'libxml2:amd64', 'libxpm4:amd64', 'libyuv0:amd64', 'media-types', 'netbase', 'openssl', 'perl', 'perl-modules-5.36', 'perl-openssl-defaults:amd64', 'procps', 'readline-common', 'sensible-utils', 'sqlite3', 'ucf'] 0m40.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: apache2 apache2-bin apache2-data apache2-utils bioperl ca-certificates fontconfig-config fonts-dejavu-core gbrowse gbrowse-calign libabsl20220623 libalgorithm-diff-perl libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl libaom3 libapache-dbi-perl libapache2-mod-perl2 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libavif15 libbio-coordinate-perl libbio-db-biofetch-perl libbio-db-gff-perl libbio-db-seqfeature-perl libbio-graphics-perl libbio-perl-perl libbrotli1 libbsd0 libcapture-tiny-perl libcgi-pm-perl libcgi-session-perl libclass-data-inheritable-perl libclone-perl libcommon-sense-perl libcurl4 libdata-stag-perl libdav1d6 libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libde265-0 libdeflate0 libdevel-stacktrace-perl libdevel-symdump-perl libencode-locale-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfile-listing-perl libfontconfig1 libfreetype6 libgav1-1 libgd-perl libgd3 libgdbm-compat4 libgdbm6 libgssapi-krb5-2 libheif1 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjansson4 libjbig0 libjpeg62-turbo libjs-prototype libjs-scriptaculous libjson-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblerc4 liblist-moreutils-perl liblist-moreutils-xs-perl liblua5.3-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libncursesw6 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnuma1 libperl5.36 libpng16-16 libpq5 libproc2-0 libpsl5 librav1e0 libreadline8 libregexp-ipv6-perl librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libssl3 libstatistics-descriptive-perl libstring-approx-perl libsub-uplevel-perl libsvtav1enc1 libterm-readkey-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl libtiff6 libtimedate-perl libtry-tiny-perl liburi-perl libvm-ec2-perl libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx265-199 libxau6 libxcb1 libxdmcp6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxpm4 libyuv0 media-types netbase openssl perl perl-modules-5.36 perl-openssl-defaults procps readline-common sensible-utils sqlite3 ucf 0 upgraded, 0 newly installed, 153 to remove and 0 not upgraded. After this operation, 210 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15186 files and directories currently installed.) Removing gbrowse-calign:amd64 (2.56+dfsg-11+b1) ... Removing gbrowse (2.56+dfsg-11) ... Conf gbrowse disabled. apache2_invoke prerm: Disable configuration gbrowse invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of reload. Removing apache2 (2.4.62-1~deb12u1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libbio-graphics-perl (2.40-6) ... Removing libbio-db-seqfeature-perl (1.7.4-2) ... Removing libbio-db-gff-perl (1.7.4-1) ... Removing libapache-dbi-perl (1.12-3) ... Removing libapache2-mod-perl2 (2.0.12-1+b2) ... Removing apache2-bin (2.4.62-1~deb12u1) ... dpkg: warning: while removing apache2-bin, directory '/var/lib/apache2' not empty so not removed Removing apache2-data (2.4.62-1~deb12u1) ... Removing apache2-utils (2.4.62-1~deb12u1) ... Removing libbio-coordinate-perl (1.7.1-4) ... Removing bioperl (1.7.8-1) ... Removing libvm-ec2-perl (1.28-4) ... Removing libgd-perl (2.76-4+b1) ... Removing libgd3:amd64 (2.3.3-9) ... Removing libfontconfig1:amd64 (2.14.1-4) ... Removing fontconfig-config (2.14.1-4) ... Removing fonts-dejavu-core (2.37-6) ... Removing libavif15:amd64 (0.11.1-1) ... Removing libgav1-1:amd64 (0.18.0-1+b1) ... Removing libabsl20220623:amd64 (20220623.1-1) ... Removing libtest-most-perl (0.38-1) ... Removing libtest-differences-perl (0.69-1) ... Removing libtext-diff-perl (1.45-2) ... Removing libalgorithm-diff-perl (1.201-1) ... Removing libanyevent-cachedns-perl (0.08-3) ... Removing libanyevent-http-perl (2.25-2) ... Removing libanyevent-perl (7.170-2+b3) ... Removing libheif1:amd64 (1.15.1-1) ... Removing libaom3:amd64 (3.6.0-1+deb12u1) ... Removing libaprutil1-ldap:amd64 (1.6.3-1) ... Removing libaprutil1-dbd-sqlite3:amd64 (1.6.3-1) ... Removing libaprutil1:amd64 (1.6.3-1) ... Removing libapr1:amd64 (1.7.2-3) ... Removing libbio-db-biofetch-perl (1.7.3-4) ... Removing libbio-perl-perl (1.7.8-1) ... Removing libcurl4:amd64 (7.88.1-10+deb12u6) ... Removing libfreetype6:amd64 (2.12.1+dfsg-5+deb12u3) ... Removing libbrotli1:amd64 (1.0.9-2+b6) ... Removing libxpm4:amd64 (1:3.5.12-1.1+deb12u1) ... Removing libx11-6:amd64 (2:1.8.4-2+deb12u2) ... Removing libxcb1:amd64 (1.15-1) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.11.7-2) ... Removing libcapture-tiny-perl (0.48-2) ... Removing libcgi-session-perl (4.48-4) ... Removing libcgi-pm-perl (4.55-1) ... Removing libexception-class-perl (1.45-1) ... Removing libclass-data-inheritable-perl (0.08-3) ... Removing libhttp-daemon-perl (6.16-1) ... Removing libcommon-sense-perl:amd64 (3.75-3) ... Removing libdata-stag-perl (0.14-3) ... Removing libdav1d6:amd64 (1.0.0-2+deb12u1) ... Removing libdbd-pg-perl (3.16.0-2) ... Removing libdbd-sqlite3-perl:amd64 (1.72-1) ... Removing libdbi-perl:amd64 (1.643-4) ... Removing libde265-0:amd64 (1.0.11-1+deb12u2) ... Removing libtiff6:amd64 (4.5.0-6+deb12u1) ... Removing libdeflate0:amd64 (1.14-1) ... Removing libdevel-stacktrace-perl (2.0400-2) ... Removing libdevel-symdump-perl (2.18-5) ... Removing libexpat1:amd64 (2.5.0-1) ... Removing libstatistics-descriptive-perl (3.0800-1) ... Removing liblist-moreutils-perl (0.430-2) ... Removing libexporter-tiny-perl (1.006000-1) ... Removing libxml-simple-perl (2.25-2) ... Removing libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Removing libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::SAX::PurePerl with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Removing libtest-deep-perl (1.204-1) ... Removing libxml-sax-base-perl (1.09-3) ... Removing libpq5:amd64 (15.8-0+deb12u1) ... Removing libgssapi-krb5-2:amd64 (1.20.1-2+deb12u2) ... Removing libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... Removing libicu72:amd64 (72.1-3) ... Removing libio-string-perl (1.08-4) ... Removing libjansson4:amd64 (2.14-2) ... Removing libjbig0:amd64 (2.1-6.1) ... Removing libyuv0:amd64 (0.0~git20230123.b2528b0-1) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-2) ... Removing libjs-scriptaculous (1.9.0-3) ... Removing libjs-prototype (1.7.3-1) ... Removing libjson-perl (4.10000-1) ... Removing libkrb5-3:amd64 (1.20.1-2+deb12u2) ... Removing libk5crypto3:amd64 (1.20.1-2+deb12u2) ... Removing libkeyutils1:amd64 (1.6.3-2) ... Removing libkrb5support0:amd64 (1.20.1-2+deb12u2) ... Removing libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Removing liblerc4:amd64 (4.0.0+ds-2) ... Removing liblist-moreutils-xs-perl (0.430-3+b1) ... Removing liblua5.3-0:amd64 (5.3.6-2) ... Removing procps (2:4.0.2-3) ... Removing libncursesw6:amd64 (6.4-4) ... Removing libnghttp2-14:amd64 (1.52.0-1+deb12u1) ... Removing libx265-199:amd64 (3.5-2+b1) ... Removing libnuma1:amd64 (2.0.16-1) ... Removing libpng16-16:amd64 (1.6.39-2) ... Removing libproc2-0:amd64 (2:4.0.2-3) ... Removing libpsl5:amd64 (0.21.2-1) ... Removing librav1e0:amd64 (0.5.1-6) ... Removing sqlite3 (3.40.1-2) ... Removing libreadline8:amd64 (8.2-1.3) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.28+dfsg-10) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Removing libsqlite3-0:amd64 (3.40.1-2) ... Removing libssh2-1:amd64 (1.10.0-3+b1) ... Removing libstring-approx-perl (3.28-2+b1) ... Removing libtest-warn-perl (0.37-2) ... Removing libtest-exception-perl (0.43-3) ... Removing libsub-uplevel-perl (0.2800-3) ... Removing libsvtav1enc1:amd64 (1.4.1+dfsg-1) ... Removing libterm-readkey-perl (2.38-2+b1) ... Removing libwebp7:amd64 (1.2.4-0.2+deb12u1) ... Removing libx11-data (2:1.8.4-2+deb12u2) ... Removing libxau6:amd64 (1:1.0.9-1) ... Removing libxml-namespacesupport-perl (1.12-2) ... Removing media-types (10.0.0) ... Removing readline-common (8.2-1.3) ... Removing ucf (3.0043+nmu1) ... Removing sensible-utils (0.0.17+nmu1) ... Removing libwww-perl (6.68-1) ... Removing libhttp-negotiate-perl (6.01-2) ... Removing libfile-listing-perl (6.15-1) ... Removing libhttp-cookies-perl (6.10-1) ... Removing libwww-robotrules-perl (6.02-1) ... Removing libhtml-tree-perl (5.07-3) ... Removing libhtml-parser-perl:amd64 (3.81-1) ... Removing libhtml-tagset-perl (3.20-6) ... Removing libtry-tiny-perl (0.31-2) ... Removing liblwp-protocol-https-perl (6.10-1) ... Removing ca-certificates (20230311) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libhttp-message-perl (6.44-1) ... Removing libclone-perl:amd64 (0.46-1) ... Removing libencode-locale-perl (1.05-3) ... Removing libhttp-date-perl (6.05-2) ... Removing libio-html-perl (1.004-3) ... Removing libio-socket-ssl-perl (2.081-2) ... Removing liblwp-mediatypes-perl (6.04-2) ... Removing libnet-http-perl (6.22-1) ... Removing libnet-ssleay-perl:amd64 (1.92-2+b1) ... Removing liburi-perl (5.17-1) ... Removing libregexp-ipv6-perl (0.03-3) ... Removing openssl (3.0.13-1~deb12u2) ... Removing perl-openssl-defaults:amd64 (7+b1) ... Removing libssl3:amd64 (3.0.13-1~deb12u2) ... Removing libtimedate-perl (2.3300-2) ... Removing netbase (6.4) ... Removing perl (5.36.0-7+deb12u1) ... Removing libperl5.36:amd64 (5.36.0-7+deb12u1) ... Removing libgdbm-compat4:amd64 (1.23-3) ... Removing libgdbm6:amd64 (1.23-3) ... Removing perl-modules-5.36 (5.36.0-7+deb12u1) ... Processing triggers for libc-bin (2.36-9+deb12u8) ... 0m40.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', 'remove', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'bioperl', 'ca-certificates', 'fontconfig-config', 'fonts-dejavu-core', 'gbrowse', 'gbrowse-calign:amd64', 'libabsl20220623:amd64', 'libalgorithm-diff-perl', 'libanyevent-cachedns-perl', 'libanyevent-http-perl', 'libanyevent-perl', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libavif15:amd64', 'libbio-coordinate-perl', 'libbio-db-biofetch-perl', 'libbio-db-gff-perl', 'libbio-db-seqfeature-perl', 'libbio-graphics-perl', 'libbio-perl-perl', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcapture-tiny-perl', 'libcgi-pm-perl', 'libcgi-session-perl', 'libclass-data-inheritable-perl', 'libclone-perl:amd64', 'libcommon-sense-perl:amd64', 'libcurl4:amd64', 'libdata-stag-perl', 'libdav1d6:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libde265-0:amd64', 'libdeflate0:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libencode-locale-perl', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfile-listing-perl', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgav1-1:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgssapi-krb5-2:amd64', 'libheif1:amd64', 'libhtml-parser-perl:amd64', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libicu72:amd64', 'libio-html-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-prototype', 'libjs-scriptaculous', 'libjson-perl', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'liblua5.3-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'libncursesw6:amd64', 'libnet-http-perl', 'libnet-ssleay-perl:amd64', 'libnghttp2-14:amd64', 'libnuma1:amd64', 'libperl5.36:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libproc2-0:amd64', 'libpsl5:amd64', 'librav1e0:amd64', 'libreadline8:amd64', 'libregexp-ipv6-perl', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libstatistics-descriptive-perl', 'libstring-approx-perl', 'libsub-uplevel-perl', 'libsvtav1enc1:amd64', 'libterm-readkey-perl', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-warn-perl', 'libtext-diff-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtry-tiny-perl', 'liburi-perl', 'libvm-ec2-perl', 'libwebp7:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx265-199:amd64', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxml-libxml-perl', 'libxml-namespacesupport-perl', 'libxml-sax-base-perl', 'libxml-sax-perl', 'libxml-simple-perl', 'libxml2:amd64', 'libxpm4:amd64', 'libyuv0:amd64', 'media-types', 'netbase', 'openssl', 'perl', 'perl-modules-5.36', 'perl-openssl-defaults:amd64', 'procps', 'readline-common', 'sensible-utils', 'sqlite3', 'ucf'] 0m40.6s INFO: Running scripts post_remove 0m40.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_remove_exceptions'] 0m40.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_remove_exceptions'] 0m40.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg', '--purge', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'bioperl', 'ca-certificates', 'fontconfig-config', 'fonts-dejavu-core', 'gbrowse', 'gbrowse-calign:amd64', 'libabsl20220623:amd64', 'libalgorithm-diff-perl', 'libanyevent-cachedns-perl', 'libanyevent-http-perl', 'libanyevent-perl', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libavif15:amd64', 'libbio-coordinate-perl', 'libbio-db-biofetch-perl', 'libbio-db-gff-perl', 'libbio-db-seqfeature-perl', 'libbio-graphics-perl', 'libbio-perl-perl', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcapture-tiny-perl', 'libcgi-pm-perl', 'libcgi-session-perl', 'libclass-data-inheritable-perl', 'libclone-perl:amd64', 'libcommon-sense-perl:amd64', 'libcurl4:amd64', 'libdata-stag-perl', 'libdav1d6:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libde265-0:amd64', 'libdeflate0:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libencode-locale-perl', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfile-listing-perl', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgav1-1:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgssapi-krb5-2:amd64', 'libheif1:amd64', 'libhtml-parser-perl:amd64', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libicu72:amd64', 'libio-html-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-prototype', 'libjs-scriptaculous', 'libjson-perl', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'liblua5.3-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'libncursesw6:amd64', 'libnet-http-perl', 'libnet-ssleay-perl:amd64', 'libnghttp2-14:amd64', 'libnuma1:amd64', 'libperl5.36:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libproc2-0:amd64', 'libpsl5:amd64', 'librav1e0:amd64', 'libreadline8:amd64', 'libregexp-ipv6-perl', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libstatistics-descriptive-perl', 'libstring-approx-perl', 'libsub-uplevel-perl', 'libsvtav1enc1:amd64', 'libterm-readkey-perl', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-warn-perl', 'libtext-diff-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtry-tiny-perl', 'liburi-perl', 'libvm-ec2-perl', 'libwebp7:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx265-199:amd64', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxml-libxml-perl', 'libxml-namespacesupport-perl', 'libxml-sax-base-perl', 'libxml-sax-perl', 'libxml-simple-perl', 'libxml2:amd64', 'libxpm4:amd64', 'libyuv0:amd64', 'media-types', 'netbase', 'openssl', 'perl', 'perl-modules-5.36', 'perl-openssl-defaults:amd64', 'procps', 'readline-common', 'sensible-utils', 'sqlite3', 'ucf'] 0m42.3s DUMP: (Reading database ... 6380 files and directories currently installed.) Purging configuration files for apache2 (2.4.62-1~deb12u1) ... dpkg: warning: ignoring request to remove apache2-bin which isn't installed dpkg: warning: ignoring request to remove apache2-data which isn't installed dpkg: warning: ignoring request to remove apache2-utils which isn't installed dpkg: warning: ignoring request to remove bioperl which isn't installed Purging configuration files for ca-certificates (20230311) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for fontconfig-config (2.14.1-4) ... Purging configuration files for fonts-dejavu-core (2.37-6) ... Purging configuration files for gbrowse (2.56+dfsg-11) ... dpkg: warning: ignoring request to remove gbrowse-calign which isn't installed dpkg: warning: ignoring request to remove libabsl20220623 which isn't installed dpkg: warning: ignoring request to remove libalgorithm-diff-perl which isn't installed dpkg: warning: ignoring request to remove libanyevent-cachedns-perl which isn't installed dpkg: warning: ignoring request to remove libanyevent-http-perl which isn't installed dpkg: warning: ignoring request to remove libanyevent-perl which isn't installed dpkg: warning: ignoring request to remove libaom3 which isn't installed dpkg: warning: ignoring request to remove libapache-dbi-perl which isn't installed Purging configuration files for libapache2-mod-perl2 (2.0.12-1+b2) ... dpkg: warning: ignoring request to remove libapr1 which isn't installed dpkg: warning: ignoring request to remove libaprutil1 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-dbd-sqlite3 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-ldap which isn't installed dpkg: warning: ignoring request to remove libavif15 which isn't installed dpkg: warning: ignoring request to remove libbio-coordinate-perl which isn't installed dpkg: warning: ignoring request to remove libbio-db-biofetch-perl which isn't installed dpkg: warning: ignoring request to remove libbio-db-gff-perl which isn't installed dpkg: warning: ignoring request to remove libbio-db-seqfeature-perl which isn't installed dpkg: warning: ignoring request to remove libbio-graphics-perl which isn't installed dpkg: warning: ignoring request to remove libbio-perl-perl which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libcapture-tiny-perl which isn't installed dpkg: warning: ignoring request to remove libcgi-pm-perl which isn't installed dpkg: warning: ignoring request to remove libcgi-session-perl which isn't installed dpkg: warning: ignoring request to remove libclass-data-inheritable-perl which isn't installed dpkg: warning: ignoring request to remove libclone-perl which isn't installed dpkg: warning: ignoring request to remove libcommon-sense-perl which isn't installed dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libdata-stag-perl which isn't installed dpkg: warning: ignoring request to remove libdav1d6 which isn't installed dpkg: warning: ignoring request to remove libdbd-pg-perl which isn't installed dpkg: warning: ignoring request to remove libdbd-sqlite3-perl which isn't installed dpkg: warning: ignoring request to remove libdbi-perl which isn't installed dpkg: warning: ignoring request to remove libde265-0 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libdevel-stacktrace-perl which isn't installed dpkg: warning: ignoring request to remove libdevel-symdump-perl which isn't installed dpkg: warning: ignoring request to remove libencode-locale-perl which isn't installed dpkg: warning: ignoring request to remove libexception-class-perl which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libexporter-tiny-perl which isn't installed dpkg: warning: ignoring request to remove libfile-listing-perl which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libgav1-1 which isn't installed dpkg: warning: ignoring request to remove libgd-perl which isn't installed dpkg: warning: ignoring request to remove libgd3 which isn't installed dpkg: warning: ignoring request to remove libgdbm-compat4 which isn't installed dpkg: warning: ignoring request to remove libgdbm6 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.20.1-2+deb12u2) ... dpkg: warning: ignoring request to remove libheif1 which isn't installed dpkg: warning: ignoring request to remove libhtml-parser-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-tagset-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-tree-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-cookies-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-daemon-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-date-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-message-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-negotiate-perl which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libio-html-perl which isn't installed dpkg: warning: ignoring request to remove libio-socket-ssl-perl which isn't installed dpkg: warning: ignoring request to remove libio-string-perl which isn't installed dpkg: warning: ignoring request to remove libjansson4 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjs-prototype which isn't installed dpkg: warning: ignoring request to remove libjs-scriptaculous which isn't installed dpkg: warning: ignoring request to remove libjson-perl which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove liblerc4 which isn't installed dpkg: warning: ignoring request to remove liblist-moreutils-perl which isn't installed dpkg: warning: ignoring request to remove liblist-moreutils-xs-perl which isn't installed dpkg: warning: ignoring request to remove liblua5.3-0 which isn't installed dpkg: warning: ignoring request to remove liblwp-mediatypes-perl which isn't installed dpkg: warning: ignoring request to remove liblwp-protocol-https-perl which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnet-http-perl which isn't installed dpkg: warning: ignoring request to remove libnet-ssleay-perl which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnuma1 which isn't installed dpkg: warning: ignoring request to remove libperl5.36 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpq5 which isn't installed dpkg: warning: ignoring request to remove libproc2-0 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove librav1e0 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove libregexp-ipv6-perl which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libssl3 which isn't installed dpkg: warning: ignoring request to remove libstatistics-descriptive-perl which isn't installed dpkg: warning: ignoring request to remove libstring-approx-perl which isn't installed dpkg: warning: ignoring request to remove libsub-uplevel-perl which isn't installed dpkg: warning: ignoring request to remove libsvtav1enc1 which isn't installed dpkg: warning: ignoring request to remove libterm-readkey-perl which isn't installed dpkg: warning: ignoring request to remove libtest-deep-perl which isn't installed dpkg: warning: ignoring request to remove libtest-differences-perl which isn't installed dpkg: warning: ignoring request to remove libtest-exception-perl which isn't installed dpkg: warning: ignoring request to remove libtest-most-perl which isn't installed dpkg: warning: ignoring request to remove libtest-warn-perl which isn't installed dpkg: warning: ignoring request to remove libtext-diff-perl which isn't installed dpkg: warning: ignoring request to remove libtiff6 which isn't installed dpkg: warning: ignoring request to remove libtimedate-perl which isn't installed dpkg: warning: ignoring request to remove libtry-tiny-perl which isn't installed dpkg: warning: ignoring request to remove liburi-perl which isn't installed dpkg: warning: ignoring request to remove libvm-ec2-perl which isn't installed dpkg: warning: ignoring request to remove libwebp7 which isn't installed dpkg: warning: ignoring request to remove libwww-perl which isn't installed dpkg: warning: ignoring request to remove libwww-robotrules-perl which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libx265-199 which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxml-libxml-perl which isn't installed dpkg: warning: ignoring request to remove libxml-namespacesupport-perl which isn't installed dpkg: warning: ignoring request to remove libxml-sax-base-perl which isn't installed Purging configuration files for libxml-sax-perl (1.02+dfsg-3) ... dpkg: warning: ignoring request to remove libxml-simple-perl which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxpm4 which isn't installed dpkg: warning: ignoring request to remove libyuv0 which isn't installed Purging configuration files for media-types (10.0.0) ... Purging configuration files for netbase (6.4) ... Purging configuration files for openssl (3.0.13-1~deb12u2) ... Purging configuration files for perl (5.36.0-7+deb12u1) ... dpkg: warning: ignoring request to remove perl-modules-5.36 which isn't installed dpkg: warning: ignoring request to remove perl-openssl-defaults which isn't installed Purging configuration files for procps (2:4.0.2-3) ... Purging configuration files for readline-common (8.2-1.3) ... dpkg: warning: ignoring request to remove sensible-utils which isn't installed dpkg: warning: ignoring request to remove sqlite3 which isn't installed Purging configuration files for ucf (3.0043+nmu1) ... 0m42.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg', '--purge', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'bioperl', 'ca-certificates', 'fontconfig-config', 'fonts-dejavu-core', 'gbrowse', 'gbrowse-calign:amd64', 'libabsl20220623:amd64', 'libalgorithm-diff-perl', 'libanyevent-cachedns-perl', 'libanyevent-http-perl', 'libanyevent-perl', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libavif15:amd64', 'libbio-coordinate-perl', 'libbio-db-biofetch-perl', 'libbio-db-gff-perl', 'libbio-db-seqfeature-perl', 'libbio-graphics-perl', 'libbio-perl-perl', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcapture-tiny-perl', 'libcgi-pm-perl', 'libcgi-session-perl', 'libclass-data-inheritable-perl', 'libclone-perl:amd64', 'libcommon-sense-perl:amd64', 'libcurl4:amd64', 'libdata-stag-perl', 'libdav1d6:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libde265-0:amd64', 'libdeflate0:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libencode-locale-perl', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfile-listing-perl', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgav1-1:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgssapi-krb5-2:amd64', 'libheif1:amd64', 'libhtml-parser-perl:amd64', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libicu72:amd64', 'libio-html-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-prototype', 'libjs-scriptaculous', 'libjson-perl', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'liblua5.3-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'libncursesw6:amd64', 'libnet-http-perl', 'libnet-ssleay-perl:amd64', 'libnghttp2-14:amd64', 'libnuma1:amd64', 'libperl5.36:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libproc2-0:amd64', 'libpsl5:amd64', 'librav1e0:amd64', 'libreadline8:amd64', 'libregexp-ipv6-perl', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libstatistics-descriptive-perl', 'libstring-approx-perl', 'libsub-uplevel-perl', 'libsvtav1enc1:amd64', 'libterm-readkey-perl', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-warn-perl', 'libtext-diff-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtry-tiny-perl', 'liburi-perl', 'libvm-ec2-perl', 'libwebp7:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx265-199:amd64', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxml-libxml-perl', 'libxml-namespacesupport-perl', 'libxml-sax-base-perl', 'libxml-sax-perl', 'libxml-simple-perl', 'libxml2:amd64', 'libxpm4:amd64', 'libyuv0:amd64', 'media-types', 'netbase', 'openssl', 'perl', 'perl-modules-5.36', 'perl-openssl-defaults:amd64', 'procps', 'readline-common', 'sensible-utils', 'sqlite3', 'ucf'] 0m42.3s INFO: Running scripts post_purge 0m42.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_purge_exceptions'] 0m42.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_purge_exceptions'] 0m42.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg', '--purge', '--pending'] 0m42.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg', '--purge', '--pending'] 0m42.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg', '--remove', '--pending'] 0m42.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg', '--remove', '--pending'] 0m42.3s INFO: Running scripts post_test 0m42.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_test_exceptions'] 0m42.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'tmp/scripts/post_test_exceptions'] 0m42.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m42.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m42.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg-divert', '--list'] 0m42.8s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m42.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'dpkg-divert', '--list'] 0m42.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', 'clean'] 0m42.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp05b24prf', 'apt-get', 'clean'] 0m42.9s DEBUG: Recording chroot state 0m44.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/shm'] 0m44.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/shm'] 0m44.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/console'] 0m44.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/console'] 0m44.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/ptmx'] 0m44.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/ptmx'] 0m44.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/pts'] 0m44.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/dev/pts'] 0m44.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/proc'] 0m44.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp05b24prf/proc'] 0m44.1s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m44.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp05b24prf'] 0m44.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp05b24prf 0m44.3s INFO: PASS: Upgrading between Debian distributions. 0m44.3s INFO: PASS: All tests. 0m44.3s INFO: piuparts run ends. ret=0 End: 2024-08-22 11:00:21 GMT