Start: 2024-08-11 07:33:00 GMT Package: snakemake Version: 5.24.1-2 Installed-Size: 21382 Maintainer: Debian Med Packaging Team Architecture: all Depends: ca-certificates, libjs-bootstrap, libjs-d3, libjs-jquery, libjs-mathjax, node-dagre-d3-renderer, python3-appdirs, python3-configargparse, python3-datrie, python3-docutils, python3-git, python3-jsonschema, python3-nbformat, python3-pkg-resources, python3-psutil, python3-pulp (<< 2.0~), python3-ratelimiter, python3-requests, python3-toposort, python3-wrapt, python3-yaml, python3:any, libjs-sphinxdoc (>= 2.4.3-5~), sphinx-rtd-theme-common (>= 0.5.1+dfsg) Recommends: cwltool, imagemagick, python3-tz, python3-yappi, python3-jinja2, python3-networkx, python3-pygments, python3-pygraphviz, python3-azure-storage, python3-biopython, python3-boto3, python3-botocore, python3-drmaa, python3-dropbox, python3-flask, python3-ftputil, python3-irodsclient, python3-kubernetes, python3-urllib3 Description: pythonic workflow management system Homepage: https://snakemake.readthedocs.io/ Description-md5: 7f9c57469c639aa1e67301b2a7ed865e Section: science Priority: optional Filename: pool/main/s/snakemake/snakemake_5.24.1-2_all.deb Size: 6107188 MD5sum: 637496914f29fdc326848f8c74959383 SHA256: 9295b92f0191bc35277c3531f223ab947e5f825902cccacb884cccfa5e41ff07 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts-log-alternatives --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d bullseye --no-upgrade-test --apt snakemake=5.24.1-2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.2 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts-log-alternatives --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d bullseye --no-upgrade-test --apt snakemake=5.24.1-2 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-31-amd64 #1 SMP Debian 5.10.221-1 (2024-07-14) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpf6gv4jtl 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpf6gv4jtl 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/proc'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/proc'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts-log-alternatives to /srv/piuparts.debian.org/tmp/tmpf6gv4jtl/tmp/scripts/ 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpf6gv4jtl/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', 'update'] 0m1.4s DUMP: Hit:1 http://deb.debian.org/debian bullseye InRelease Reading package lists... 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', 'update'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', '-yf', 'dist-upgrade'] 0m1.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', '-yf', 'dist-upgrade'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.2s DUMP: e0568dca630aa17b9cacee75afdb778e - 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.2s INFO: Running scripts post_setup 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_dummy_users'] 0m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_dummy_users'] 0m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_forbid_home'] 0m3.1s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_forbid_home'] 0m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.2s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_minimize'] 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_minimize'] 0m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_zz_backports'] 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_setup_zz_backports'] 0m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', 'clean'] 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', 'clean'] 0m3.2s DEBUG: Recording chroot state 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.8s DUMP: install ok installed adduser adduser 3.118+deb11u1 install ok installed apt apt 2.2.4 install ok installed base-files base-files 11.1+deb11u10 install ok installed base-passwd base-passwd 3.5.51 install ok installed bash bash 5.1-2+deb11u1 install ok installed bsdutils bsdutils 1:2.36.1-8+deb11u2 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-5 install ok installed debconf debconf 1.5.77 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1+deb11u1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-5 install ok installed dpkg dpkg 1.20.13 install ok installed e2fsprogs e2fsprogs 1.46.2-2 install ok installed findutils findutils 4.8.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-22 install ok installed gpgv gpgv 2.2.27-2+deb11u2 install ok installed grep grep 3.6-1+deb11u1 install ok installed gzip gzip 1.10-4+deb11u1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.60 install ok installed libacl1:amd64 libacl1 2.2.53-10 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.2.4 install ok installed libattr1:amd64 libattr1 1:2.4.48-6 install ok installed libaudit-common libaudit-common 1:3.0-2 install ok installed libaudit1:amd64 libaudit1 1:3.0-2 install ok installed libblkid1:amd64 libblkid1 2.36.1-8+deb11u2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-13+deb11u10 install ok installed libc6:amd64 libc6 2.31-13+deb11u10 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcom-err2:amd64 libcom-err2 1.46.2-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.18-4 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.8 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.260 install ok installed libext2fs2:amd64 libext2fs2 1.46.2-2 install ok installed libffi7:amd64 libffi7 3.3-6 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.1-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-6 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1+deb11u1 install ok installed libgnutls30:amd64 libgnutls30 3.7.1-5+deb11u5 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-6+deb11u4 install ok installed libhogweed6:amd64 libhogweed6 3.7.3-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-5 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-6+deb11u4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-6+deb11u4 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-6+deb11u4 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1~deb11u1 install ok installed libmount1:amd64 libmount1 2.36.1-8+deb11u2 install ok installed libnettle8:amd64 libnettle8 3.7.3-1 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.22-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-9+deb11u1 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-9+deb11u1 install ok installed libpam-runtime libpam-runtime 1.4.0-9+deb11u1 install ok installed libpam0g:amd64 libpam0g 1.4.0-9+deb11u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.36-2+deb11u1 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.5.1-1+deb11u1 install ok installed libselinux1:amd64 libselinux1 3.1-3 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b2 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-8+deb11u2 install ok installed libss2:amd64 libss2 1.46.2-2 install ok installed libssl1.1:amd64 libssl1.1 1.1.1w-0+deb11u1 install ok installed libstdc++6:amd64 libstdc++6 10.2.1-6 install ok installed libsystemd0:amd64 libsystemd0 247.3-7+deb11u5 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2+deb11u1 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-2+deb11u2 install ok installed libtirpc-common libtirpc-common 1.3.1-1+deb11u1 install ok installed libtirpc3:amd64 libtirpc3 1.3.1-1+deb11u1 install ok installed libudev1:amd64 libudev1 247.3-7+deb11u5 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-8+deb11u2 install ok installed libxxhash0:amd64 libxxhash0 0.8.0-2 install ok installed libzstd1:amd64 libzstd1 1.4.8+dfsg-2.1 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.46.2-2 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36.1-8+deb11u2 install ok installed ncurses-base ncurses-base 6.2+20201114-2+deb11u2 install ok installed ncurses-bin ncurses-bin 6.2+20201114-2+deb11u2 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.32.1-4+deb11u3 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-7+deb11u1 install ok installed tar tar 1.34+dfsg-1+deb11u1 install ok installed tzdata tzdata 2024a-0+deb11u1 install ok installed util-linux util-linux 2.36.1-8+deb11u2 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2+deb11u2 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg-divert', '--list'] 0m3.8s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg-divert', '--list'] 0m3.8s INFO: Running scripts is_testable 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/is_testable_uninstallable'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/is_testable_uninstallable'] 0m3.8s INFO: apt-cache does not know about any of the requested packages 0m3.8s INFO: Running scripts pre_test 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_test_exceptions'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_test_exceptions'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_test_root_password'] 0m3.9s DUMP: New password: Retype new password: passwd: password updated successfully 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_test_root_password'] 0m3.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 0m4.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 0m5.2s DEBUG: No broken symlinks as far as we can find. 0m5.2s INFO: Running scripts pre_install 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_database-server'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_database-server'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_exceptions'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_exceptions'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_extras'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_extras'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_log_alternatives'] 0m5.2s DUMP: Adding 'local diversion of /usr/bin/update-alternatives to /usr/bin/update-alternatives.orig' dpkg-divert: warning: diverting file '/usr/bin/update-alternatives' from an Essential package with rename is dangerous, use --no-rename 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_install_log_alternatives'] 0m5.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 0m5.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 0m6.4s DEBUG: No broken symlinks as far as we can find. 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-cache', 'policy'] 0m7.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release v=11.10,o=Debian,a=oldstable,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-cache', 'policy'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-cache', 'policy', 'snakemake'] 0m7.3s DUMP: snakemake: Installed: (none) Candidate: 5.24.1-2 Version table: 5.24.1-2 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-cache', 'policy', 'snakemake'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', '-y', 'install', 'snakemake=5.24.1-2'] 0m40.5s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: ca-certificates coinor-cbc coinor-libcbc3 coinor-libcgl1 coinor-libclp1 coinor-libcoinutils3v5 coinor-libosi1v5 docutils-common fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-mathjax git git-man libblas3 libbrotli1 libc-ares2 libcurl3-gnutls libdatrie1 libdeflate0 liberror-perl libexpat1 libgdbm-compat4 libgdbm6 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0 libicu67 libjbig0 libjpeg62-turbo libjs-bootstrap libjs-d3 libjs-d3-format libjs-inherits libjs-jquery libjs-mathjax libjs-sphinxdoc libjs-sprintf-js libjs-underscore libjs-util liblapack3 libldap-2.4-2 libmpdec3 libncursesw6 libnghttp2-14 libnode72 libnotify-bin libnotify4 libperl5.32 libpng16-16 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libtiff5 libuv1 libwebp6 libxml2 libyaml-0-2 media-types mocha node-ansi-colors node-ansi-regex node-ansi-styles node-anymatch node-argparse node-assert node-async-each node-balanced-match node-binary-extensions node-brace-expansion node-braces node-browser-stdout node-camelcase node-chalk node-chokidar node-cliui node-clone node-color-convert node-color-name node-commander node-d3 node-d3-array node-d3-axis node-d3-brush node-d3-chord node-d3-collection node-d3-color node-d3-contour node-d3-dispatch node-d3-drag node-d3-dsv node-d3-ease node-d3-fetch node-d3-force node-d3-format node-d3-geo node-d3-hierarchy node-d3-interpolate node-d3-path node-d3-polygon node-d3-quadtree node-d3-queue node-d3-random node-d3-scale node-d3-scale-chromatic node-d3-selection node-d3-shape node-d3-time node-d3-time-format node-d3-timer node-d3-transition node-d3-voronoi node-d3-zoom node-dagre-d3-renderer node-dagre-layout node-debug node-decamelize node-defaults node-diff node-end-of-stream node-escape-string-regexp node-esprima node-execa node-fill-range node-find-up node-fs.realpath node-get-caller-file node-get-stream node-glob node-glob-parent node-graceful-fs node-graphlibrary node-growl node-has-flag node-he node-iconv-lite node-inflight node-inherits node-invert-kv node-is-binary-path node-is-buffer node-is-extglob node-is-glob node-is-number node-is-plain-obj node-is-stream node-isexe node-js-yaml node-kind-of node-lcid node-locate-path node-lodash node-mem node-merge-stream node-mimic-fn node-minimatch node-ms node-normalize-path node-npm-run-path node-object-assign node-once node-os-locale node-p-limit node-p-locate node-path-dirname node-path-exists node-path-is-absolute node-pump node-randombytes node-readdirp node-repeat-string node-require-directory node-require-main-filename node-rw node-safe-buffer node-serialize-javascript node-set-blocking node-set-immediate-shim node-shebang-command node-shebang-regex node-signal-exit node-sprintf-js node-string-width node-strip-ansi node-strip-json-comments node-supports-color node-to-regex-range node-util node-wcwidth.js node-which node-which-module node-wide-align node-wrap-ansi node-wrappy node-y18n node-yargs node-yargs-parser nodejs openssl perl perl-modules-5.32 python3 python3-appdirs python3-attr python3-certifi python3-chardet python3-configargparse python3-datrie python3-distutils python3-docutils python3-git python3-gitdb python3-idna python3-importlib-metadata python3-ipython-genutils python3-jsonschema python3-jupyter-core python3-lib2to3 python3-minimal python3-more-itertools python3-nbformat python3-pkg-resources python3-psutil python3-pulp python3-pyparsing python3-pyrsistent python3-ratelimiter python3-requests python3-roman python3-setuptools python3-six python3-smmap python3-toposort python3-traitlets python3-urllib3 python3-wrapt python3-yaml python3-zipp python3.9 python3.9-minimal readline-common sgml-base shared-mime-info sphinx-rtd-theme-common xml-core Suggested packages: gettext-base git-daemon-run | git-daemon-sysvinit git-doc git-el git-email git-gui gitk gitweb git-cvs git-mediawiki git-svn gdbm-l10n fonts-mathjax-extras fonts-stix libjs-mathjax-doc libjs-angularjs sensible-utils chai javascript-common npm perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make libtap-harness-archive-perl python3-doc python3-tk python3-venv python-attr-doc docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french texlive-latex-base texlive-latex-recommended python-git-doc python-jsonschema-doc python3-pip python-psutil-doc python-pyparsing-doc python3-cryptography python3-openssl python3-socks python-requests-doc python-setuptools-doc python3-nose python3.9-venv python3.9-doc binutils binfmt-support readline-doc sgml-base-doc debhelper Recommended packages: patch less ssh-client libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs javascript-common libldap-common libgpm2 notification-daemon publicsuffix libsasl2-modules nodejs-doc netbase libpaper-utils python3-pil python3-pygments cwltool imagemagick python3-tz python3-yappi python3-jinja2 python3-networkx python3-pygraphviz python3-azure-storage python3-biopython python3-boto3 python3-botocore python3-drmaa python3-dropbox python3-flask python3-ftputil python3-irodsclient python3-kubernetes The following NEW packages will be installed: ca-certificates coinor-cbc coinor-libcbc3 coinor-libcgl1 coinor-libclp1 coinor-libcoinutils3v5 coinor-libosi1v5 docutils-common fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-mathjax git git-man libblas3 libbrotli1 libc-ares2 libcurl3-gnutls libdatrie1 libdeflate0 liberror-perl libexpat1 libgdbm-compat4 libgdbm6 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0 libicu67 libjbig0 libjpeg62-turbo libjs-bootstrap libjs-d3 libjs-d3-format libjs-inherits libjs-jquery libjs-mathjax libjs-sphinxdoc libjs-sprintf-js libjs-underscore libjs-util liblapack3 libldap-2.4-2 libmpdec3 libncursesw6 libnghttp2-14 libnode72 libnotify-bin libnotify4 libperl5.32 libpng16-16 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libtiff5 libuv1 libwebp6 libxml2 libyaml-0-2 media-types mocha node-ansi-colors node-ansi-regex node-ansi-styles node-anymatch node-argparse node-assert node-async-each node-balanced-match node-binary-extensions node-brace-expansion node-braces node-browser-stdout node-camelcase node-chalk node-chokidar node-cliui node-clone node-color-convert node-color-name node-commander node-d3 node-d3-array node-d3-axis node-d3-brush node-d3-chord node-d3-collection node-d3-color node-d3-contour node-d3-dispatch node-d3-drag node-d3-dsv node-d3-ease node-d3-fetch node-d3-force node-d3-format node-d3-geo node-d3-hierarchy node-d3-interpolate node-d3-path node-d3-polygon node-d3-quadtree node-d3-queue node-d3-random node-d3-scale node-d3-scale-chromatic node-d3-selection node-d3-shape node-d3-time node-d3-time-format node-d3-timer node-d3-transition node-d3-voronoi node-d3-zoom node-dagre-d3-renderer node-dagre-layout node-debug node-decamelize node-defaults node-diff node-end-of-stream node-escape-string-regexp node-esprima node-execa node-fill-range node-find-up node-fs.realpath node-get-caller-file node-get-stream node-glob node-glob-parent node-graceful-fs node-graphlibrary node-growl node-has-flag node-he node-iconv-lite node-inflight node-inherits node-invert-kv node-is-binary-path node-is-buffer node-is-extglob node-is-glob node-is-number node-is-plain-obj node-is-stream node-isexe node-js-yaml node-kind-of node-lcid node-locate-path node-lodash node-mem node-merge-stream node-mimic-fn node-minimatch node-ms node-normalize-path node-npm-run-path node-object-assign node-once node-os-locale node-p-limit node-p-locate node-path-dirname node-path-exists node-path-is-absolute node-pump node-randombytes node-readdirp node-repeat-string node-require-directory node-require-main-filename node-rw node-safe-buffer node-serialize-javascript node-set-blocking node-set-immediate-shim node-shebang-command node-shebang-regex node-signal-exit node-sprintf-js node-string-width node-strip-ansi node-strip-json-comments node-supports-color node-to-regex-range node-util node-wcwidth.js node-which node-which-module node-wide-align node-wrap-ansi node-wrappy node-y18n node-yargs node-yargs-parser nodejs openssl perl perl-modules-5.32 python3 python3-appdirs python3-attr python3-certifi python3-chardet python3-configargparse python3-datrie python3-distutils python3-docutils python3-git python3-gitdb python3-idna python3-importlib-metadata python3-ipython-genutils python3-jsonschema python3-jupyter-core python3-lib2to3 python3-minimal python3-more-itertools python3-nbformat python3-pkg-resources python3-psutil python3-pulp python3-pyparsing python3-pyrsistent python3-ratelimiter python3-requests python3-roman python3-setuptools python3-six python3-smmap python3-toposort python3-traitlets python3-urllib3 python3-wrapt python3-yaml python3-zipp python3.9 python3.9-minimal readline-common sgml-base shared-mime-info snakemake sphinx-rtd-theme-common xml-core 0 upgraded, 255 newly installed, 0 to remove and 0 not upgraded. Need to get 77.5 MB of archives. After this operation, 342 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 perl-modules-5.32 all 5.32.1-4+deb11u3 [2823 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 libgdbm6 amd64 1.19-2 [64.9 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 libgdbm-compat4 amd64 1.19-2 [44.7 kB] Get:4 http://deb.debian.org/debian bullseye/main amd64 libperl5.32 amd64 5.32.1-4+deb11u3 [4121 kB] Get:5 http://deb.debian.org/debian bullseye/main amd64 perl amd64 5.32.1-4+deb11u3 [293 kB] Get:6 http://deb.debian.org/debian bullseye/main amd64 fonts-lato all 2.0-2.1 [2696 kB] Get:7 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-minimal amd64 3.9.2-1 [801 kB] Get:8 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2+deb11u5 [98.2 kB] Get:9 http://deb.debian.org/debian bullseye/main amd64 python3.9-minimal amd64 3.9.2-1 [1955 kB] Get:10 http://deb.debian.org/debian bullseye/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get:11 http://deb.debian.org/debian bullseye/main amd64 media-types all 4.0.0 [30.3 kB] Get:12 http://deb.debian.org/debian bullseye/main amd64 libmpdec3 amd64 2.5.1-1 [87.7 kB] Get:13 http://deb.debian.org/debian bullseye/main amd64 libncursesw6 amd64 6.2+20201114-2+deb11u2 [132 kB] Get:14 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get:15 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get:16 http://deb.debian.org/debian bullseye/main amd64 libsqlite3-0 amd64 3.34.1-3 [797 kB] Get:17 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-stdlib amd64 3.9.2-1 [1684 kB] Get:18 http://deb.debian.org/debian bullseye/main amd64 python3.9 amd64 3.9.2-1 [466 kB] Get:19 http://deb.debian.org/debian bullseye/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get:20 http://deb.debian.org/debian bullseye/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get:21 http://deb.debian.org/debian bullseye/main amd64 sgml-base all 1.30 [15.1 kB] Get:22 http://deb.debian.org/debian bullseye/main amd64 openssl amd64 1.1.1w-0+deb11u1 [859 kB] Get:23 http://deb.debian.org/debian bullseye/main amd64 ca-certificates all 20210119 [158 kB] Get:24 http://deb.debian.org/debian bullseye/main amd64 libblas3 amd64 3.9.0-3+deb11u1 [153 kB] Get:25 http://deb.debian.org/debian bullseye/main amd64 libquadmath0 amd64 10.2.1-6 [145 kB] Get:26 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.1-6 [727 kB] Get:27 http://deb.debian.org/debian bullseye/main amd64 liblapack3 amd64 3.9.0-3+deb11u1 [2166 kB] Get:28 http://deb.debian.org/debian bullseye/main amd64 coinor-libcoinutils3v5 amd64 2.11.4+repack1-1 [485 kB] Get:29 http://deb.debian.org/debian bullseye/main amd64 coinor-libosi1v5 amd64 0.108.6+repack1-2 [276 kB] Get:30 http://deb.debian.org/debian bullseye/main amd64 coinor-libclp1 amd64 1.17.5+repack1-1 [939 kB] Get:31 http://deb.debian.org/debian bullseye/main amd64 coinor-libcgl1 amd64 0.60.3+repack1-2 [433 kB] Get:32 http://deb.debian.org/debian bullseye/main amd64 coinor-libcbc3 amd64 2.10.5+ds1-3 [715 kB] Get:33 http://deb.debian.org/debian bullseye/main amd64 coinor-cbc amd64 2.10.5+ds1-3 [14.7 kB] Get:34 http://deb.debian.org/debian bullseye/main amd64 xml-core all 0.18+nmu1 [23.8 kB] Get:35 http://deb.debian.org/debian bullseye/main amd64 docutils-common all 0.16+dfsg-4 [129 kB] Get:36 http://deb.debian.org/debian bullseye/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get:37 http://deb.debian.org/debian bullseye/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-2 [164 kB] Get:38 http://deb.debian.org/debian bullseye/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get:39 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get:40 http://deb.debian.org/debian bullseye/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1+deb11u1 [69.1 kB] Get:41 http://deb.debian.org/debian bullseye/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1+deb11u1 [106 kB] Get:42 http://deb.debian.org/debian bullseye/main amd64 libldap-2.4-2 amd64 2.4.57+dfsg-3+deb11u1 [232 kB] Get:43 http://deb.debian.org/debian bullseye/main amd64 libnghttp2-14 amd64 1.43.0-1+deb11u1 [77.2 kB] Get:44 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:45 http://deb.debian.org/debian bullseye/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:46 http://deb.debian.org/debian bullseye/main amd64 libssh2-1 amd64 1.9.0-2+deb11u1 [156 kB] Get:47 http://deb.debian.org/debian bullseye/main amd64 libcurl3-gnutls amd64 7.74.0-1.3+deb11u12 [344 kB] Get:48 http://deb.debian.org/debian bullseye/main amd64 liberror-perl all 0.17029-1 [31.0 kB] Get:49 http://deb.debian.org/debian bullseye/main amd64 git-man all 1:2.30.2-1+deb11u2 [1828 kB] Get:50 http://deb.debian.org/debian bullseye/main amd64 git amd64 1:2.30.2-1+deb11u2 [5518 kB] Get:51 http://deb.debian.org/debian bullseye/main amd64 libc-ares2 amd64 1.17.1-1+deb11u3 [102 kB] Get:52 http://deb.debian.org/debian bullseye/main amd64 libdatrie1 amd64 0.2.13-1 [42.7 kB] Get:53 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get:54 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf2.0-common all 2.42.2+dfsg-1+deb11u2 [320 kB] Get:55 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-0 amd64 2.66.8-1+deb11u4 [1377 kB] Get:56 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:57 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u4 [693 kB] Get:58 http://deb.debian.org/debian bullseye/main amd64 shared-mime-info amd64 2.0-1 [701 kB] Get:59 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get:60 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get:61 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:62 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1+deb11u2 [259 kB] Get:63 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1+deb11u5 [290 kB] Get:64 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.2+dfsg-1+deb11u2 [147 kB] Get:65 http://deb.debian.org/debian bullseye/main amd64 libjs-bootstrap all 3.4.1+dfsg-2 [173 kB] Get:66 http://deb.debian.org/debian bullseye/main amd64 libjs-d3 all 3.5.17-4 [132 kB] Get:67 http://deb.debian.org/debian bullseye/main amd64 libjs-d3-format all 1:1.4.1-3 [16.9 kB] Get:68 http://deb.debian.org/debian bullseye/main amd64 libjs-inherits all 2.0.4-1 [3228 B] Get:69 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get:70 http://deb.debian.org/debian bullseye/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get:71 http://deb.debian.org/debian bullseye/main amd64 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get:72 http://deb.debian.org/debian bullseye/main amd64 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get:73 http://deb.debian.org/debian bullseye/main amd64 libjs-sprintf-js all 1.1.2+ds1-2 [12.3 kB] Get:74 http://deb.debian.org/debian bullseye/main amd64 libuv1 amd64 1.40.0-2+deb11u1 [132 kB] Get:75 http://deb.debian.org/debian bullseye/main amd64 libnode72 amd64 12.22.12~dfsg-1~deb11u4 [8332 kB] Get:76 http://deb.debian.org/debian bullseye/main amd64 nodejs amd64 12.22.12~dfsg-1~deb11u4 [148 kB] Get:77 http://deb.debian.org/debian bullseye/main amd64 node-inherits all 2.0.4-1 [4204 B] Get:78 http://deb.debian.org/debian bullseye/main amd64 libjs-util all 0.10.3-4 [9620 B] Get:79 http://deb.debian.org/debian bullseye/main amd64 libnotify4 amd64 0.7.9-3 [23.7 kB] Get:80 http://deb.debian.org/debian bullseye/main amd64 libnotify-bin amd64 0.7.9-3 [14.2 kB] Get:81 http://deb.debian.org/debian bullseye/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:82 http://deb.debian.org/debian bullseye/main amd64 node-ansi-colors all 4.1.1-2 [13.2 kB] Get:83 http://deb.debian.org/debian bullseye/main amd64 node-browser-stdout all 1.3.1-2 [3268 B] Get:84 http://deb.debian.org/debian bullseye/main amd64 node-camelcase all 6.2.0-2 [5512 B] Get:85 http://deb.debian.org/debian bullseye/main amd64 node-color-name all 1.1.4+~1.1.1-1 [5788 B] Get:86 http://deb.debian.org/debian bullseye/main amd64 node-color-convert all 1.9.3-1 [10.2 kB] Get:87 http://deb.debian.org/debian bullseye/main amd64 node-ansi-styles all 4.2.1-1 [7600 B] Get:88 http://deb.debian.org/debian bullseye/main amd64 node-escape-string-regexp all 4.0.0-1 [4116 B] Get:89 http://deb.debian.org/debian bullseye/main amd64 node-has-flag all 4.0.0-1 [4076 B] Get:90 http://deb.debian.org/debian bullseye/main amd64 node-supports-color all 8.1.0+~7.2.0-1 [6736 B] Get:91 http://deb.debian.org/debian bullseye/main amd64 node-chalk all 4.1.0-1 [15.0 kB] Get:92 http://deb.debian.org/debian bullseye/main amd64 node-is-extglob all 2.1.1-1 [4128 B] Get:93 http://deb.debian.org/debian bullseye/main amd64 node-is-glob all 4.0.1-1 [6312 B] Get:94 http://deb.debian.org/debian bullseye/main amd64 node-binary-extensions all 2.2.0-1 [4352 B] Get:95 http://deb.debian.org/debian bullseye/main amd64 node-is-binary-path all 2.1.0-1 [3432 B] Get:96 http://deb.debian.org/debian bullseye/main amd64 node-normalize-path all 3.0.0-2 [5752 B] Get:97 http://deb.debian.org/debian bullseye/main amd64 node-anymatch all 3.1.1+~2.2.2-1 [28.5 kB] Get:98 http://deb.debian.org/debian bullseye/main amd64 node-graceful-fs all 4.2.4+repack-1 [13.1 kB] Get:99 http://deb.debian.org/debian bullseye/main amd64 node-set-immediate-shim all 2.0.0-1 [3600 B] Get:100 http://deb.debian.org/debian bullseye/main amd64 node-readdirp all 3.5.0-2 [11.3 kB] Get:101 http://deb.debian.org/debian bullseye/main amd64 node-async-each all 1.0.3-1 [4024 B] Get:102 http://deb.debian.org/debian bullseye/main amd64 node-is-buffer all 2.0.5-1 [4048 B] Get:103 http://deb.debian.org/debian bullseye/main amd64 node-kind-of all 6.0.3+dfsg-1 [10.0 kB] Get:104 http://deb.debian.org/debian bullseye/main amd64 node-is-number all 7.0.0-1.1 [5860 B] Get:105 http://deb.debian.org/debian bullseye/main amd64 node-repeat-string all 1.6.1-1 [5180 B] Get:106 http://deb.debian.org/debian bullseye/main amd64 node-to-regex-range all 5.0.1-2 [10.2 kB] Get:107 http://deb.debian.org/debian bullseye/main amd64 node-fill-range all 7.0.1-2 [7872 B] Get:108 http://deb.debian.org/debian bullseye/main amd64 node-braces all 3.0.2+~3.0.0-1 [20.6 kB] Get:109 http://deb.debian.org/debian bullseye/main amd64 node-path-is-absolute all 2.0.0-1 [3864 B] Get:110 http://deb.debian.org/debian bullseye/main amd64 node-path-dirname all 1.0.2-1.1 [3972 B] Get:111 http://deb.debian.org/debian bullseye/main amd64 node-glob-parent all 5.1.1+~5.1.0-2 [6672 B] Get:112 http://deb.debian.org/debian bullseye/main amd64 node-chokidar all 3.4.3-3 [32.0 kB] Get:113 http://deb.debian.org/debian bullseye/main amd64 node-ms all 2.1.3+~cs0.7.31-1 [5612 B] Get:114 http://deb.debian.org/debian bullseye/main amd64 node-debug all 4.3.1+~cs4.1.5-1 [17.3 kB] Get:115 http://deb.debian.org/debian bullseye/main amd64 node-decamelize all 4.0.0-1 [3944 B] Get:116 http://deb.debian.org/debian bullseye/main amd64 node-diff all 4.0.2~dfsg-2 [65.0 kB] Get:117 http://deb.debian.org/debian bullseye/main amd64 node-p-limit all 3.1.0+~cs2.3.0-1 [6904 B] Get:118 http://deb.debian.org/debian bullseye/main amd64 node-p-locate all 5.0.0-1 [5080 B] Get:119 http://deb.debian.org/debian bullseye/main amd64 node-path-exists all 4.0.0-2 [3840 B] Get:120 http://deb.debian.org/debian bullseye/main amd64 node-locate-path all 6.0.0-1 [5264 B] Get:121 http://deb.debian.org/debian bullseye/main amd64 node-find-up all 5.0.0-1 [5840 B] Get:122 http://deb.debian.org/debian bullseye/main amd64 node-fs.realpath all 1.0.0-1.1 [5780 B] Get:123 http://deb.debian.org/debian bullseye/main amd64 node-wrappy all 1.0.2-1.1 [3352 B] Get:124 http://deb.debian.org/debian bullseye/main amd64 node-once all 1.4.0-3 [4344 B] Get:125 http://deb.debian.org/debian bullseye/main amd64 node-inflight all 1.0.6-1.1 [3568 B] Get:126 http://deb.debian.org/debian bullseye/main amd64 node-balanced-match all 1.0.0-1 [4528 B] Get:127 http://deb.debian.org/debian bullseye/main amd64 node-brace-expansion all 2.0.0-1 [7184 B] Get:128 http://deb.debian.org/debian bullseye/main amd64 node-minimatch all 3.0.4+~3.0.3-1+deb11u2 [16.1 kB] Get:129 http://deb.debian.org/debian bullseye/main amd64 node-glob all 7.1.6+~7.1.3-1 [129 kB] Get:130 http://deb.debian.org/debian bullseye/main amd64 node-growl all 1.10.5-2 [7356 B] Get:131 http://deb.debian.org/debian bullseye/main amd64 node-he all 1.2.0-1 [36.7 kB] Get:132 http://deb.debian.org/debian bullseye/main amd64 node-is-plain-obj all 3.0.0-1 [3916 B] Get:133 http://deb.debian.org/debian bullseye/main amd64 node-sprintf-js all 1.1.2+ds1-2 [1836 B] Get:134 http://deb.debian.org/debian bullseye/main amd64 node-argparse all 2.0.1-1 [34.5 kB] Get:135 http://deb.debian.org/debian bullseye/main amd64 node-esprima all 4.0.1+ds+~4.0.2-2 [69.0 kB] Get:136 http://deb.debian.org/debian bullseye/main amd64 node-js-yaml all 3.14.1+dfsg+~3.12.6-2 [44.8 kB] Get:137 http://deb.debian.org/debian bullseye/main amd64 node-safe-buffer all 5.2.1+~cs2.1.2-1 [15.5 kB] Get:138 http://deb.debian.org/debian bullseye/main amd64 node-randombytes all 2.1.0-1 [4104 B] Get:139 http://deb.debian.org/debian bullseye/main amd64 node-serialize-javascript all 5.0.1-2 [11.5 kB] Get:140 http://deb.debian.org/debian bullseye/main amd64 node-strip-json-comments all 3.1.1-1 [5168 B] Get:141 http://deb.debian.org/debian bullseye/main amd64 node-isexe all 2.0.0-5 [4632 B] Get:142 http://deb.debian.org/debian bullseye/main amd64 node-which all 2.0.2+~cs1.3.2-1 [8436 B] Get:143 http://deb.debian.org/debian bullseye/main amd64 node-ansi-regex all 5.0.1-1~deb11u1 [4704 B] Get:144 http://deb.debian.org/debian bullseye/main amd64 node-strip-ansi all 6.0.0-2 [4044 B] Get:145 http://deb.debian.org/debian bullseye/main amd64 node-clone all 2.1.2-2 [8132 B] Get:146 http://deb.debian.org/debian bullseye/main amd64 node-defaults all 1.0.3-2 [3612 B] Get:147 http://deb.debian.org/debian bullseye/main amd64 node-wcwidth.js all 1.0.0-1.1 [6652 B] Get:148 http://deb.debian.org/debian bullseye/main amd64 node-string-width all 4.2.0-1 [9716 B] Get:149 http://deb.debian.org/debian bullseye/main amd64 node-wide-align all 1.1.3-1 [3896 B] Get:150 http://deb.debian.org/debian bullseye/main amd64 node-require-directory all 2.1.1-1.1 [5596 B] Get:151 http://deb.debian.org/debian bullseye/main amd64 node-get-caller-file all 1.0.2-1.1 [3056 B] Get:152 http://deb.debian.org/debian bullseye/main amd64 node-set-blocking all 2.0.0-1.1 [4036 B] Get:153 http://deb.debian.org/debian bullseye/main amd64 node-require-main-filename all 2.0.0-1 [4108 B] Get:154 http://deb.debian.org/debian bullseye/main amd64 node-wrap-ansi all 4.0.0-2 [5540 B] Get:155 http://deb.debian.org/debian bullseye/main amd64 node-cliui all 4.1.0-2 [7964 B] Get:156 http://deb.debian.org/debian bullseye/main amd64 node-which-module all 2.0.0-1 [3792 B] Get:157 http://deb.debian.org/debian bullseye/main amd64 node-end-of-stream all 1.4.4-1 [4356 B] Get:158 http://deb.debian.org/debian bullseye/main amd64 node-pump all 3.0.0-4 [4936 B] Get:159 http://deb.debian.org/debian bullseye/main amd64 node-get-stream all 6.0.0-1 [7172 B] Get:160 http://deb.debian.org/debian bullseye/main amd64 node-is-stream all 2.0.0-1 [4004 B] Get:161 http://deb.debian.org/debian bullseye/main amd64 node-merge-stream all 2.0.0+~1.1.2-1 [5036 B] Get:162 http://deb.debian.org/debian bullseye/main amd64 node-mimic-fn all 3.1.0-1 [5180 B] Get:163 http://deb.debian.org/debian bullseye/main amd64 node-npm-run-path all 2.0.2-2 [4412 B] Get:164 http://deb.debian.org/debian bullseye/main amd64 node-shebang-regex all 3.0.0-1 [3352 B] Get:165 http://deb.debian.org/debian bullseye/main amd64 node-shebang-command all 1.2.0-1.1 [3132 B] Get:166 http://deb.debian.org/debian bullseye/main amd64 node-signal-exit all 3.0.3-1 [6172 B] Get:167 http://deb.debian.org/debian bullseye/main amd64 node-execa all 4.1.0+dfsg+~cs19.3.6-5 [28.1 kB] Get:168 http://deb.debian.org/debian bullseye/main amd64 node-invert-kv all 3.0.1-1 [3904 B] Get:169 http://deb.debian.org/debian bullseye/main amd64 node-lcid all 3.1.1-1 [5280 B] Get:170 http://deb.debian.org/debian bullseye/main amd64 node-mem all 1.1.0-1.1 [4308 B] Get:171 http://deb.debian.org/debian bullseye/main amd64 node-os-locale all 5.0.0-1 [4876 B] Get:172 http://deb.debian.org/debian bullseye/main amd64 node-y18n all 4.0.0-4 [6256 B] Get:173 http://deb.debian.org/debian bullseye/main amd64 node-yargs-parser all 18.1.3+~15.0.0-1 [24.0 kB] Get:174 http://deb.debian.org/debian bullseye/main amd64 node-yargs all 15.3.1+repack-2 [109 kB] Get:175 http://deb.debian.org/debian bullseye/main amd64 mocha all 8.2.1+ds1+~cs29.4.27-3 [157 kB] Get:176 http://deb.debian.org/debian bullseye/main amd64 node-object-assign all 4.1.1-3 [4460 B] Get:177 http://deb.debian.org/debian bullseye/main amd64 node-util all 0.10.3-4 [2960 B] Get:178 http://deb.debian.org/debian bullseye/main amd64 node-assert all 1.5.0-1 [8892 B] Get:179 http://deb.debian.org/debian bullseye/main amd64 node-commander all 6.2.1-2 [38.3 kB] Get:180 http://deb.debian.org/debian bullseye/main amd64 node-d3-array all 1.2.4-3 [19.2 kB] Get:181 http://deb.debian.org/debian bullseye/main amd64 node-d3-axis all 1.0.12-3 [10.1 kB] Get:182 http://deb.debian.org/debian bullseye/main amd64 node-d3-dispatch all 1.0.6-2 [7856 B] Get:183 http://deb.debian.org/debian bullseye/main amd64 node-d3-selection all 1.4.0-6 [30.7 kB] Get:184 http://deb.debian.org/debian bullseye/main amd64 node-d3-drag all 1.2.5-2 [13.9 kB] Get:185 http://deb.debian.org/debian bullseye/main amd64 node-d3-color all 1.2.8-2 [15.0 kB] Get:186 http://deb.debian.org/debian bullseye/main amd64 node-d3-interpolate all 1.4.0-2 [18.5 kB] Get:187 http://deb.debian.org/debian bullseye/main amd64 node-d3-ease all 1.0.5-3 [9932 B] Get:188 http://deb.debian.org/debian bullseye/main amd64 node-d3-timer all 1.0.10-1 [8608 B] Get:189 http://deb.debian.org/debian bullseye/main amd64 node-d3-transition all 1.3.2-3 [22.2 kB] Get:190 http://deb.debian.org/debian bullseye/main amd64 node-d3-brush all 1.1.5-2 [181 kB] Get:191 http://deb.debian.org/debian bullseye/main amd64 node-d3-path all 1.0.9-2 [8212 B] Get:192 http://deb.debian.org/debian bullseye/main amd64 node-d3-chord all 1.0.6-3 [10.0 kB] Get:193 http://deb.debian.org/debian bullseye/main amd64 node-d3-collection all 1.0.7-3 [11.7 kB] Get:194 http://deb.debian.org/debian bullseye/main amd64 node-d3-contour all 1.3.2-4 [13.6 kB] Get:195 http://deb.debian.org/debian bullseye/main amd64 node-iconv-lite all 0.5.1-3 [128 kB] Get:196 http://deb.debian.org/debian bullseye/main amd64 node-d3-queue all 3.0.7-11 [9828 B] Get:197 http://deb.debian.org/debian bullseye/main amd64 node-rw all 1.3.3-2 [7096 B] Get:198 http://deb.debian.org/debian bullseye/main amd64 node-d3-dsv all 1.1.1-5 [14.5 kB] Get:199 http://deb.debian.org/debian bullseye/main amd64 node-d3-fetch all 1.2.0-1 [7344 B] Get:200 http://deb.debian.org/debian bullseye/main amd64 node-d3-quadtree all 1.0.7-2 [13.1 kB] Get:201 http://deb.debian.org/debian bullseye/main amd64 node-d3-force all 1.2.1-2 [368 kB] Get:202 http://deb.debian.org/debian bullseye/main amd64 node-d3-format all 1:1.4.1-3 [9004 B] Get:203 http://deb.debian.org/debian bullseye/main amd64 node-d3-geo all 1.11.9-4 [53.6 kB] Get:204 http://deb.debian.org/debian bullseye/main amd64 node-d3-hierarchy all 1.1.8-3 [28.6 kB] Get:205 http://deb.debian.org/debian bullseye/main amd64 node-d3-polygon all 1.0.5-3 [7396 B] Get:206 http://deb.debian.org/debian bullseye/main amd64 node-d3-random all 1.1.2-3 [7184 B] Get:207 http://deb.debian.org/debian bullseye/main amd64 node-d3-time all 1.0.11-4 [14.6 kB] Get:208 http://deb.debian.org/debian bullseye/main amd64 node-d3-time-format all 2.1.3-3 [18.9 kB] Get:209 http://deb.debian.org/debian bullseye/main amd64 node-d3-scale all 2.2.2-3 [31.5 kB] Get:210 http://deb.debian.org/debian bullseye/main amd64 node-d3-scale-chromatic all 1.5.0-2 [18.5 kB] Get:211 http://deb.debian.org/debian bullseye/main amd64 node-d3-shape all 1.3.7-2 [40.4 kB] Get:212 http://deb.debian.org/debian bullseye/main amd64 node-d3-voronoi all 1.1.4-3 [17.1 kB] Get:213 http://deb.debian.org/debian bullseye/main amd64 node-d3-zoom all 1.8.3-2 [20.1 kB] Get:214 http://deb.debian.org/debian bullseye/main amd64 node-d3 all 5.16.0-4 [208 kB] Get:215 http://deb.debian.org/debian bullseye/main amd64 node-lodash all 4.17.21+dfsg+~cs8.31.173-1 [385 kB] Get:216 http://deb.debian.org/debian bullseye/main amd64 node-graphlibrary all 2.2.0+really2.1.8+dfsg-3 [53.2 kB] Get:217 http://deb.debian.org/debian bullseye/main amd64 node-dagre-layout all 0.8.8+really0.8.5+dfsg-4 [42.4 kB] Get:218 http://deb.debian.org/debian bullseye/main amd64 node-dagre-d3-renderer all 0.6.4+dfsg-3 [601 kB] Get:219 http://deb.debian.org/debian bullseye/main amd64 python3-appdirs all 1.4.4-1 [12.7 kB] Get:220 http://deb.debian.org/debian bullseye/main amd64 python3-attr all 20.3.0-1 [52.9 kB] Get:221 http://deb.debian.org/debian bullseye/main amd64 python3-certifi all 2020.6.20-1 [151 kB] Get:222 http://deb.debian.org/debian bullseye/main amd64 python3-pkg-resources all 52.0.0-4 [190 kB] Get:223 http://deb.debian.org/debian bullseye/main amd64 python3-chardet all 4.0.0-1 [99.0 kB] Get:224 http://deb.debian.org/debian bullseye/main amd64 python3-configargparse all 1.2.3-1 [25.2 kB] Get:225 http://deb.debian.org/debian bullseye/main amd64 python3-datrie amd64 0.8.2-1+b1 [98.5 kB] Get:226 http://deb.debian.org/debian bullseye/main amd64 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get:227 http://deb.debian.org/debian bullseye/main amd64 python3-distutils all 3.9.2-1 [143 kB] Get:228 http://deb.debian.org/debian bullseye/main amd64 python3-roman all 2.0.0-5 [9064 B] Get:229 http://deb.debian.org/debian bullseye/main amd64 python3-docutils all 0.16+dfsg-4 [384 kB] Get:230 http://deb.debian.org/debian bullseye/main amd64 python3-smmap all 4.0.0-1 [21.0 kB] Get:231 http://deb.debian.org/debian bullseye/main amd64 python3-gitdb all 4.0.5-1 [46.5 kB] Get:232 http://deb.debian.org/debian bullseye/main amd64 python3-git all 3.1.14-1 [119 kB] Get:233 http://deb.debian.org/debian bullseye/main amd64 python3-idna all 2.10-1+deb11u1 [39.0 kB] Get:234 http://deb.debian.org/debian bullseye/main amd64 python3-six all 1.16.0-2 [17.5 kB] Get:235 http://deb.debian.org/debian bullseye/main amd64 python3-more-itertools all 4.2.0-3 [42.7 kB] Get:236 http://deb.debian.org/debian bullseye/main amd64 python3-zipp all 1.0.0-3 [6060 B] Get:237 http://deb.debian.org/debian bullseye/main amd64 python3-importlib-metadata all 1.6.0-2 [10.3 kB] Get:238 http://deb.debian.org/debian bullseye/main amd64 python3-ipython-genutils all 0.2.0-4 [21.4 kB] Get:239 http://deb.debian.org/debian bullseye/main amd64 python3-setuptools all 52.0.0-4 [366 kB] Get:240 http://deb.debian.org/debian bullseye/main amd64 python3-pyrsistent amd64 0.15.5-1+b3 [59.1 kB] Get:241 http://deb.debian.org/debian bullseye/main amd64 python3-jsonschema all 3.2.0-3 [46.3 kB] Get:242 http://deb.debian.org/debian bullseye/main amd64 python3-traitlets all 5.0.5-1 [84.4 kB] Get:243 http://deb.debian.org/debian bullseye/main amd64 python3-jupyter-core all 4.7.1-1+deb11u1 [44.2 kB] Get:244 http://deb.debian.org/debian bullseye/main amd64 python3-nbformat all 5.1.2-1 [51.6 kB] Get:245 http://deb.debian.org/debian bullseye/main amd64 python3-psutil amd64 5.8.0-1 [184 kB] Get:246 http://deb.debian.org/debian bullseye/main amd64 python3-pyparsing all 2.4.7-1 [109 kB] Get:247 http://deb.debian.org/debian bullseye/main amd64 python3-pulp all 1.6.0+dfsg1-5 [54.0 kB] Get:248 http://deb.debian.org/debian bullseye/main amd64 python3-ratelimiter amd64 1.2.0.post0-1 [5508 B] Get:249 http://deb.debian.org/debian bullseye/main amd64 python3-urllib3 all 1.26.5-1~exp1 [114 kB] Get:250 http://deb.debian.org/debian bullseye/main amd64 python3-requests all 2.25.1+dfsg-2 [69.3 kB] Get:251 http://deb.debian.org/debian bullseye/main amd64 python3-toposort all 1.6-1 [7620 B] Get:252 http://deb.debian.org/debian bullseye/main amd64 python3-wrapt amd64 1.12.1-4+b1 [39.3 kB] Get:253 http://deb.debian.org/debian bullseye/main amd64 python3-yaml amd64 5.3.1-5 [138 kB] Get:254 http://deb.debian.org/debian bullseye/main amd64 sphinx-rtd-theme-common all 0.5.1+dfsg-1 [995 kB] Get:255 http://deb.debian.org/debian bullseye/main amd64 snakemake all 5.24.1-2 [6107 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 77.5 MB in 2s (47.3 MB/s) Selecting previously unselected package perl-modules-5.32. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6675 files and directories currently installed.) Preparing to unpack .../0-perl-modules-5.32_5.32.1-4+deb11u3_all.deb ... Unpacking perl-modules-5.32 (5.32.1-4+deb11u3) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../1-libgdbm6_1.19-2_amd64.deb ... Unpacking libgdbm6:amd64 (1.19-2) ... Selecting previously unselected package libgdbm-compat4:amd64. Preparing to unpack .../2-libgdbm-compat4_1.19-2_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.19-2) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../3-libperl5.32_5.32.1-4+deb11u3_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-4+deb11u3) ... Selecting previously unselected package perl. Preparing to unpack .../4-perl_5.32.1-4+deb11u3_amd64.deb ... Unpacking perl (5.32.1-4+deb11u3) ... Selecting previously unselected package fonts-lato. Preparing to unpack .../5-fonts-lato_2.0-2.1_all.deb ... Unpacking fonts-lato (2.0-2.1) ... Selecting previously unselected package libpython3.9-minimal:amd64. Preparing to unpack .../6-libpython3.9-minimal_3.9.2-1_amd64.deb ... Unpacking libpython3.9-minimal:amd64 (3.9.2-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../7-libexpat1_2.2.10-2+deb11u5_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-2+deb11u5) ... Selecting previously unselected package python3.9-minimal. 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Preparing to unpack .../223-python3-jupyter-core_4.7.1-1+deb11u1_all.deb ... Unpacking python3-jupyter-core (4.7.1-1+deb11u1) ... Selecting previously unselected package python3-nbformat. Preparing to unpack .../224-python3-nbformat_5.1.2-1_all.deb ... Unpacking python3-nbformat (5.1.2-1) ... Selecting previously unselected package python3-psutil. Preparing to unpack .../225-python3-psutil_5.8.0-1_amd64.deb ... Unpacking python3-psutil (5.8.0-1) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../226-python3-pyparsing_2.4.7-1_all.deb ... Unpacking python3-pyparsing (2.4.7-1) ... Selecting previously unselected package python3-pulp. Preparing to unpack .../227-python3-pulp_1.6.0+dfsg1-5_all.deb ... Unpacking python3-pulp (1.6.0+dfsg1-5) ... Selecting previously unselected package python3-ratelimiter. Preparing to unpack .../228-python3-ratelimiter_1.2.0.post0-1_amd64.deb ... Unpacking python3-ratelimiter (1.2.0.post0-1) ... Selecting previously unselected package python3-urllib3. Preparing to unpack .../229-python3-urllib3_1.26.5-1~exp1_all.deb ... Unpacking python3-urllib3 (1.26.5-1~exp1) ... Selecting previously unselected package python3-requests. Preparing to unpack .../230-python3-requests_2.25.1+dfsg-2_all.deb ... Unpacking python3-requests (2.25.1+dfsg-2) ... Selecting previously unselected package python3-toposort. Preparing to unpack .../231-python3-toposort_1.6-1_all.deb ... Unpacking python3-toposort (1.6-1) ... Selecting previously unselected package python3-wrapt. Preparing to unpack .../232-python3-wrapt_1.12.1-4+b1_amd64.deb ... Unpacking python3-wrapt (1.12.1-4+b1) ... Selecting previously unselected package python3-yaml. Preparing to unpack .../233-python3-yaml_5.3.1-5_amd64.deb ... Unpacking python3-yaml (5.3.1-5) ... Selecting previously unselected package sphinx-rtd-theme-common. Preparing to unpack .../234-sphinx-rtd-theme-common_0.5.1+dfsg-1_all.deb ... Unpacking sphinx-rtd-theme-common (0.5.1+dfsg-1) ... Selecting previously unselected package snakemake. Preparing to unpack .../235-snakemake_5.24.1-2_all.deb ... Unpacking snakemake (5.24.1-2) ... Setting up media-types (4.0.0) ... Setting up libpsl5:amd64 (0.21.0-1.2) ... Setting up fonts-lato (2.0-2.1) ... Setting up libjs-sprintf-js (1.1.2+ds1-2) ... Setting up fonts-mathjax (2.7.9+dfsg-1) ... Setting up libjs-inherits (2.0.4-1) ... Setting up libjs-mathjax (2.7.9+dfsg-1) ... Setting up libicu67:amd64 (67.1-7) ... Setting up libdatrie1:amd64 (0.2.13-1) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libglib2.0-0:amd64 (2.66.8-1+deb11u4) ... No schema files found: doing nothing. Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-2) ... Setting up perl-modules-5.32 (5.32.1-4+deb11u3) ... Setting up libbrotli1:amd64 (1.0.9-2+b2) ... Setting up libsqlite3-0:amd64 (3.34.1-3) ... Setting up libgdk-pixbuf2.0-common (2.42.2+dfsg-1+deb11u2) ... Setting up libnghttp2-14:amd64 (1.43.0-1+deb11u1) ... Setting up libdeflate0:amd64 (1.7-1) ... Setting up node-color-name (1.1.4+~1.1.1-1) ... Setting up libc-ares2:amd64 (1.17.1-1+deb11u3) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Setting up libblas3:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libuv1:amd64 (1.40.0-2+deb11u1) ... Setting up libjpeg62-turbo:amd64 (1:2.0.6-4) ... Setting up node-sprintf-js (1.1.2+ds1-2) ... Setting up node-shebang-regex (3.0.0-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up node-is-stream (2.0.0-1) ... Setting up libquadmath0:amd64 (10.2.1-6) ... Setting up libjs-d3 (3.5.17-4) ... Setting up libpng16-16:amd64 (1.6.37-3) ... Setting up libwebp6:amd64 (0.6.1-2.1+deb11u2) ... Setting up libncursesw6:amd64 (6.2+20201114-2+deb11u2) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Setting up libgfortran5:amd64 (10.2.1-6) ... Setting up libjs-d3-format (1:1.4.1-3) ... Setting up libmpdec3:amd64 (2.5.1-1) ... Setting up node-esprima (4.0.1+ds+~4.0.2-2) ... Setting up git-man (1:2.30.2-1+deb11u2) ... Setting up libssh2-1:amd64 (1.9.0-2+deb11u1) ... Setting up sgml-base (1.30) ... Setting up libtiff5:amd64 (4.2.0-1+deb11u5) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up openssl (1.1.1w-0+deb11u1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7+deb11u4) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up sphinx-rtd-theme-common (0.5.1+dfsg-1) ... Setting up node-is-buffer (2.0.5-1) ... Setting up libjs-bootstrap (3.4.1+dfsg-2) ... Setting up node-is-plain-obj (3.0.0-1) ... Setting up libgdbm6:amd64 (1.19-2) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up liblapack3:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libreadline8:amd64 (8.1-1) ... Setting up libldap-2.4-2:amd64 (2.4.57+dfsg-3+deb11u1) ... Setting up libcurl3-gnutls:amd64 (7.74.0-1.3+deb11u12) ... Setting up libnode72:amd64 (12.22.12~dfsg-1~deb11u4) ... Setting up coinor-libcoinutils3v5 (2.11.4+repack1-1) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up shared-mime-info (2.0-1) ... Setting up libgdbm-compat4:amd64 (1.19-2) ... Setting up libperl5.32:amd64 (5.32.1-4+deb11u3) ... Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up coinor-libosi1v5:amd64 (0.108.6+repack1-2) ... Setting up xml-core (0.18+nmu1) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.2+dfsg-1+deb11u2) ... Setting up libpython3.9-stdlib:amd64 (3.9.2-1) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up nodejs (12.22.12~dfsg-1~deb11u4) ... update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode Setting up node-argparse (2.0.1-1) ... Setting up node-d3-path (1.0.9-2) ... Setting up node-he (1.2.0-1) ... Setting up node-clone (2.1.2-2) ... Setting up node-has-flag (4.0.0-1) ... Setting up node-inherits (2.0.4-1) ... Setting up node-path-is-absolute (2.0.0-1) ... Setting up node-iconv-lite (0.5.1-3) ... Setting up perl (5.32.1-4+deb11u3) ... Setting up node-safe-buffer (5.2.1+~cs2.1.2-1) ... Setting up node-d3-polygon (1.0.5-3) ... Setting up node-y18n (4.0.0-4) ... Setting up node-d3-quadtree (1.0.7-2) ... Setting up node-balanced-match (1.0.0-1) ... Setting up node-brace-expansion (2.0.0-1) ... Setting up libnotify4:amd64 (0.7.9-3) ... Setting up coinor-libclp1 (1.17.5+repack1-1) ... Setting up node-set-blocking (2.0.0-1.1) ... Setting up node-repeat-string (1.6.1-1) ... Setting up node-d3-collection (1.0.7-3) ... Setting up node-signal-exit (3.0.3-1) ... Setting up node-randombytes (2.1.0-1) ... Setting up node-wrappy (1.0.2-1.1) ... Setting up node-d3-voronoi (1.1.4-3) ... Setting up node-require-directory (2.1.1-1.1) ... Setting up node-d3-dispatch (1.0.6-2) ... Setting up node-d3-time (1.0.11-4) ... Setting up libnotify-bin (0.7.9-3) ... Setting up node-defaults (1.0.3-2) ... Setting up node-commander (6.2.1-2) ... Setting up node-d3-array (1.2.4-3) ... Setting up node-graceful-fs (4.2.4+repack-1) ... Setting up node-merge-stream (2.0.0+~1.1.2-1) ... Setting up node-binary-extensions (2.2.0-1) ... Setting up node-mimic-fn (3.1.0-1) ... Setting up node-path-dirname (1.0.2-1.1) ... Setting up node-minimatch (3.0.4+~3.0.3-1+deb11u2) ... Setting up coinor-libcgl1 (0.60.3+repack1-2) ... Setting up node-d3-geo (1.11.9-4) ... Setting up node-set-immediate-shim (2.0.0-1) ... Setting up node-js-yaml (3.14.1+dfsg+~3.12.6-2) ... Setting up node-npm-run-path (2.0.2-2) ... Setting up node-color-convert (1.9.3-1) ... Setting up node-lodash (4.17.21+dfsg+~cs8.31.173-1) ... Setting up node-d3-random (1.1.2-3) ... Setting up node-async-each (1.0.3-1) ... Setting up python3.9 (3.9.2-1) ... Setting up node-is-extglob (2.1.1-1) ... Setting up node-ms (2.1.3+~cs0.7.31-1) ... Setting up node-shebang-command (1.2.0-1.1) ... Setting up node-ansi-colors (4.1.1-2) ... Setting up node-fs.realpath (1.0.0-1.1) ... Setting up node-diff (4.0.2~dfsg-2) ... Setting up coinor-libcbc3:amd64 (2.10.5+ds1-3) ... Setting up node-d3-timer (1.0.10-1) ... Setting up node-object-assign (4.1.1-3) ... Setting up node-is-glob (4.0.1-1) ... Setting up node-d3-color (1.2.8-2) ... Setting up node-d3-interpolate (1.4.0-2) ... Setting up node-d3-queue (3.0.7-11) ... Setting up node-mem (1.1.0-1.1) ... Setting up node-supports-color (8.1.0+~7.2.0-1) ... Setting up node-invert-kv (3.0.1-1) ... Setting up node-d3-format (1:1.4.1-3) ... Setting up node-p-limit (3.1.0+~cs2.3.0-1) ... Setting up node-ansi-regex (5.0.1-1~deb11u1) ... Setting up node-d3-hierarchy (1.1.8-3) ... Setting up node-d3-ease (1.0.5-3) ... Setting up node-strip-json-comments (3.1.1-1) ... Setting up node-once (1.4.0-3) ... Setting up node-browser-stdout (1.3.1-2) ... Setting up node-get-caller-file (1.0.2-1.1) ... Setting up node-require-main-filename (2.0.0-1) ... Setting up node-d3-time-format (2.1.3-3) ... Setting up node-d3-scale-chromatic (1.5.0-2) ... Setting up node-serialize-javascript (5.0.1-2) ... Setting up node-isexe (2.0.0-5) ... Setting up node-path-exists (4.0.0-2) ... Setting up node-d3-chord (1.0.6-3) ... Setting up node-escape-string-regexp (4.0.0-1) ... Setting up node-p-locate (5.0.0-1) ... Setting up node-which-module (2.0.0-1) ... Setting up node-decamelize (4.0.0-1) ... Setting up node-normalize-path (3.0.0-2) ... Setting up node-kind-of (6.0.3+dfsg-1) ... Setting up node-growl (1.10.5-2) ... Setting up node-d3-selection (1.4.0-6) ... Setting up python3 (3.9.2-3) ... Setting up node-is-binary-path (2.1.0-1) ... Setting up node-debug (4.3.1+~cs4.1.5-1) ... Setting up libjs-util (0.10.3-4) ... Setting up node-camelcase (6.2.0-2) ... Setting up node-d3-axis (1.0.12-3) ... Setting up node-d3-shape (1.3.7-2) ... Setting up node-yargs-parser (18.1.3+~15.0.0-1) ... Setting up python3-psutil (5.8.0-1) ... Setting up python3-ratelimiter (1.2.0.post0-1) ... Setting up liberror-perl (0.17029-1) ... Setting up node-wcwidth.js (1.0.0-1.1) ... Setting up python3-six (1.16.0-2) ... Setting up node-locate-path (6.0.0-1) ... Setting up python3-roman (2.0.0-5) ... Setting up node-d3-drag (1.2.5-2) ... Setting up node-rw (1.3.3-2) ... Setting up coinor-cbc (2.10.5+ds1-3) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up node-ansi-styles (4.2.1-1) ... Setting up python3-certifi (2020.6.20-1) ... Setting up node-d3-scale (2.2.2-3) ... Setting up node-strip-ansi (6.0.0-2) ... Setting up python3-idna (2.10-1+deb11u1) ... Setting up python3-wrapt (1.12.1-4+b1) ... Setting up node-chalk (4.1.0-1) ... Setting up git (1:2.30.2-1+deb11u2) ... Setting up node-which (2.0.2+~cs1.3.2-1) ... Setting up node-lcid (3.1.1-1) ... Setting up node-d3-force (1.2.1-2) ... Setting up node-d3-contour (1.3.2-4) ... Setting up python3-urllib3 (1.26.5-1~exp1) ... Setting up python3-pyrsistent:amd64 (0.15.5-1+b3) ... Setting up node-inflight (1.0.6-1.1) ... Setting up node-glob-parent (5.1.1+~5.1.0-2) ... Setting up python3-datrie:amd64 (0.8.2-1+b1) ... Setting up node-d3-dsv (1.1.1-5) ... Setting up node-anymatch (3.1.1+~2.2.2-1) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up node-d3-transition (1.3.2-3) ... Setting up python3-appdirs (1.4.4-1) ... Setting up python3-smmap (4.0.0-1) ... Setting up node-string-width (4.2.0-1) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up python3-distutils (3.9.2-1) ... Setting up python3-toposort (1.6-1) ... Setting up python3-more-itertools (4.2.0-3) ... Setting up python3-configargparse (1.2.3-1) ... Setting up python3-attr (20.3.0-1) ... Setting up node-is-number (7.0.0-1.1) ... Setting up node-end-of-stream (1.4.4-1) ... Setting up python3-setuptools (52.0.0-4) ... Setting up node-pump (3.0.0-4) ... Setting up python3-ipython-genutils (0.2.0-4) ... Setting up python3-pulp (1.6.0+dfsg1-5) ... /usr/lib/python3/dist-packages/pulp/pulp.py:700: SyntaxWarning: "is" with a literal. Did you mean "=="? if other is 0: return self /usr/lib/python3/dist-packages/pulp/pulp.py:720: SyntaxWarning: "is" with a literal. Did you mean "=="? if other is 0: return self Setting up node-d3-zoom (1.8.3-2) ... Setting up node-find-up (5.0.0-1) ... Setting up python3-yaml (5.3.1-5) ... Setting up node-d3-fetch (1.2.0-1) ... Setting up node-util (0.10.3-4) ... Setting up python3-gitdb (4.0.5-1) ... Setting up python3-zipp (1.0.0-3) ... Setting up python3-chardet (4.0.0-1) ... Setting up node-wrap-ansi (4.0.0-2) ... Setting up node-glob (7.1.6+~7.1.3-1) ... Setting up node-readdirp (3.5.0-2) ... Setting up python3-git (3.1.14-1) ... Setting up node-get-stream (6.0.0-1) ... Setting up python3-requests (2.25.1+dfsg-2) ... Setting up node-assert (1.5.0-1) ... Setting up node-d3-brush (1.1.5-2) ... Setting up python3-traitlets (5.0.5-1) ... Setting up node-wide-align (1.1.3-1) ... Setting up python3-jupyter-core (4.7.1-1+deb11u1) ... Setting up node-cliui (4.1.0-2) ... Setting up node-to-regex-range (5.0.1-2) ... Setting up python3-importlib-metadata (1.6.0-2) ... Setting up node-execa (4.1.0+dfsg+~cs19.3.6-5) ... Setting up node-d3 (5.16.0-4) ... Setting up node-os-locale (5.0.0-1) ... Setting up python3-jsonschema (3.2.0-3) ... Setting up node-fill-range (7.0.1-2) ... Setting up node-yargs (15.3.1+repack-2) ... Setting up python3-nbformat (5.1.2-1) ... Setting up node-braces (3.0.2+~3.0.0-1) ... Setting up node-chokidar (3.4.3-3) ... Setting up mocha (8.2.1+ds1+~cs29.4.27-3) ... Setting up node-graphlibrary (2.2.0+really2.1.8+dfsg-3) ... Setting up node-dagre-layout (0.8.8+really0.8.5+dfsg-4) ... Setting up node-dagre-d3-renderer (0.6.4+dfsg-3) ... Processing triggers for libc-bin (2.31-13+deb11u10) ... Processing triggers for sgml-base (1.30) ... Setting up docutils-common (0.16+dfsg-4) ... Processing triggers for sgml-base (1.30) ... Setting up python3-docutils (0.16+dfsg-4) ... update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up snakemake (5.24.1-2) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', '-y', 'install', 'snakemake=5.24.1-2'] 0m40.5s INFO: Running scripts post_install 0m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_install_exceptions'] 0m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_install_exceptions'] 0m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_install_log_alternatives'] 0m40.5s DUMP: Removing 'local diversion of /usr/bin/update-alternatives to /usr/bin/update-alternatives.orig' LOG-ALTERNATIVES: dpkg=python3: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --auto /usr/bin/python3 LOG-ALTERNATIVES: dpkg=libblas3: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/libblas.so.3 libblas.so.3-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 10 LOG-ALTERNATIVES: dpkg=liblapack3: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/liblapack.so.3 liblapack.so.3-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 10 LOG-ALTERNATIVES: dpkg=nodejs: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --remove js /usr/bin/node LOG-ALTERNATIVES: dpkg=nodejs: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/js js /usr/bin/nodejs 200 --slave /usr/share/man/man1/js.1.gz js.1.gz /usr/share/man/man1/nodejs.1.gz LOG-ALTERNATIVES: dpkg=perl: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --remove rename /usr/bin/prename LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst-buildhtml rst-buildhtml /usr/share/docutils/scripts/python3/rst-buildhtml 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2html rst2html /usr/share/docutils/scripts/python3/rst2html 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2html4 rst2html4 /usr/share/docutils/scripts/python3/rst2html4 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2html5 rst2html5 /usr/share/docutils/scripts/python3/rst2html5 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2latex rst2latex /usr/share/docutils/scripts/python3/rst2latex 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2man rst2man /usr/share/docutils/scripts/python3/rst2man 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2odt rst2odt /usr/share/docutils/scripts/python3/rst2odt 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2odt_prepstyles rst2odt_prepstyles /usr/share/docutils/scripts/python3/rst2odt_prepstyles 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2pseudoxml rst2pseudoxml /usr/share/docutils/scripts/python3/rst2pseudoxml 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2s5 rst2s5 /usr/share/docutils/scripts/python3/rst2s5 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2xetex rst2xetex /usr/share/docutils/scripts/python3/rst2xetex 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rst2xml rst2xml /usr/share/docutils/scripts/python3/rst2xml 30 LOG-ALTERNATIVES: dpkg=python3-docutils: piuparts=snakemake=5.24.1-2: /usr/bin/update-alternatives --install /usr/bin/rstpep2html rstpep2html /usr/share/docutils/scripts/python3/rstpep2html 30 0m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_install_log_alternatives'] 0m40.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 0m42.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 0m44.7s ERROR: WARN: Broken symlinks: /usr/share/doc/libjs-sprintf-js/examples/angular.min.js -> ../../../javascript/angular.js/angular.min.js (libjs-sprintf-js) 0m44.7s INFO: /bin converted to /usr/bin by /usr merge 0m44.7s INFO: /lib converted to /usr/lib by /usr merge 0m44.7s INFO: /lib/init converted to /usr/lib/init by /usr merge 0m44.7s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 0m44.7s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 0m44.7s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 0m44.7s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 0m44.7s INFO: /lib/terminfo converted to /usr/lib/terminfo by /usr merge 0m44.7s INFO: /lib/terminfo/E converted to /usr/lib/terminfo/E by /usr merge 0m44.7s INFO: /lib/terminfo/a converted to /usr/lib/terminfo/a by /usr merge 0m44.7s INFO: /lib/terminfo/c converted to /usr/lib/terminfo/c by /usr merge 0m44.7s INFO: /lib/terminfo/d converted to /usr/lib/terminfo/d by /usr merge 0m44.7s INFO: /lib/terminfo/h converted to /usr/lib/terminfo/h by /usr merge 0m44.7s INFO: /lib/terminfo/l converted to /usr/lib/terminfo/l by /usr merge 0m44.7s INFO: /lib/terminfo/m converted to /usr/lib/terminfo/m by /usr merge 0m44.7s INFO: /lib/terminfo/p converted to /usr/lib/terminfo/p by /usr merge 0m44.7s INFO: /lib/terminfo/r converted to /usr/lib/terminfo/r by /usr merge 0m44.7s INFO: /lib/terminfo/s converted to /usr/lib/terminfo/s by /usr merge 0m44.7s INFO: /lib/terminfo/t converted to /usr/lib/terminfo/t by /usr merge 0m44.7s INFO: /lib/terminfo/v converted to /usr/lib/terminfo/v by /usr merge 0m44.7s INFO: /lib/terminfo/w converted to /usr/lib/terminfo/w by /usr merge 0m44.7s INFO: /lib/terminfo/x converted to /usr/lib/terminfo/x by /usr merge 0m44.7s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 0m44.7s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 0m44.7s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 0m44.7s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 0m44.7s INFO: /lib64 converted to /usr/lib64 by /usr merge 0m44.7s INFO: /sbin converted to /usr/sbin by /usr merge 0m46.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', '-ac', '--ignore-obsolete'] 0m48.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', '-ac', '--ignore-obsolete'] 0m48.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m48.9s DUMP: 0.15.6 0m48.9s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m48.9s INFO: Running adequate version 0.15.6 now. 0m48.9s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'snakemake'] 0m49.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'snakemake'] 0m49.1s INFO: Running scripts pre_remove 0m49.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m49.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m49.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m49.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m49.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m54.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m54.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m54.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m54.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m54.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m54.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_exceptions'] 0m54.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/pre_remove_exceptions'] 0m54.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m54.4s DUMP: install ok installed adduser adduser 3.118+deb11u1 install ok installed apt apt 2.2.4 install ok installed base-files base-files 11.1+deb11u10 install ok installed base-passwd base-passwd 3.5.51 install ok installed bash bash 5.1-2+deb11u1 install ok installed bsdutils bsdutils 1:2.36.1-8+deb11u2 install ok installed ca-certificates ca-certificates 20210119 install ok installed coinor-cbc coinor-cbc 2.10.5+ds1-3 install ok installed coinor-libcbc3:amd64 coinor-libcbc3 2.10.5+ds1-3 install ok installed coinor-libcgl1 coinor-libcgl1 0.60.3+repack1-2 install ok installed coinor-libclp1 coinor-libclp1 1.17.5+repack1-1 install ok installed coinor-libcoinutils3v5 coinor-libcoinutils3v5 2.11.4+repack1-1 install ok installed coinor-libosi1v5:amd64 coinor-libosi1v5 0.108.6+repack1-2 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-5 install ok installed debconf debconf 1.5.77 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1+deb11u1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-5 install ok installed docutils-common docutils-common 0.16+dfsg-4 install ok installed dpkg dpkg 1.20.13 install ok installed e2fsprogs e2fsprogs 1.46.2-2 install ok installed findutils findutils 4.8.0-1 install ok installed fonts-font-awesome fonts-font-awesome 5.0.10+really4.7.0~dfsg-4.1 install ok installed fonts-glyphicons-halflings fonts-glyphicons-halflings 1.009~3.4.1+dfsg-2 install ok installed fonts-lato fonts-lato 2.0-2.1 install ok installed fonts-mathjax fonts-mathjax 2.7.9+dfsg-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-22 install ok installed git git 1:2.30.2-1+deb11u2 install ok installed git-man git-man 1:2.30.2-1+deb11u2 install ok installed gpgv gpgv 2.2.27-2+deb11u2 install ok installed grep grep 3.6-1+deb11u1 install ok installed gzip gzip 1.10-4+deb11u1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.60 install ok installed libacl1:amd64 libacl1 2.2.53-10 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.2.4 install ok installed libattr1:amd64 libattr1 1:2.4.48-6 install ok installed libaudit-common libaudit-common 1:3.0-2 install ok installed libaudit1:amd64 libaudit1 1:3.0-2 install ok installed libblas3:amd64 libblas3 3.9.0-3+deb11u1 install ok installed libblkid1:amd64 libblkid1 2.36.1-8+deb11u2 install ok installed libbrotli1:amd64 libbrotli1 1.0.9-2+b2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-ares2:amd64 libc-ares2 1.17.1-1+deb11u3 install ok installed libc-bin libc-bin 2.31-13+deb11u10 install ok installed libc6:amd64 libc6 2.31-13+deb11u10 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcom-err2:amd64 libcom-err2 1.46.2-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.18-4 install ok installed libcurl3-gnutls:amd64 libcurl3-gnutls 7.74.0-1.3+deb11u12 install ok installed libdatrie1:amd64 libdatrie1 0.2.13-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.8 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.260 install ok installed libdeflate0:amd64 libdeflate0 1.7-1 install ok installed liberror-perl liberror-perl 0.17029-1 install ok installed libexpat1:amd64 libexpat1 2.2.10-2+deb11u5 install ok installed libext2fs2:amd64 libext2fs2 1.46.2-2 install ok installed libffi7:amd64 libffi7 3.3-6 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.1-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-6 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.19-2 install ok installed libgdbm6:amd64 libgdbm6 1.19-2 install ok installed libgdk-pixbuf-2.0-0:amd64 libgdk-pixbuf-2.0-0 2.42.2+dfsg-1+deb11u2 install ok installed libgdk-pixbuf2.0-common libgdk-pixbuf2.0-common 2.42.2+dfsg-1+deb11u2 install ok installed libgfortran5:amd64 libgfortran5 10.2.1-6 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.66.8-1+deb11u4 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1+deb11u1 install ok installed libgnutls30:amd64 libgnutls30 3.7.1-5+deb11u5 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-6+deb11u4 install ok installed libhogweed6:amd64 libhogweed6 3.7.3-1 install ok installed libicu67:amd64 libicu67 67.1-7 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-5 install ok installed libjbig0:amd64 libjbig0 2.1-3.1+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.0.6-4 install ok installed libjs-bootstrap libjs-bootstrap 3.4.1+dfsg-2 install ok installed libjs-d3 libjs-d3 3.5.17-4 install ok installed libjs-d3-format libjs-d3-format 1:1.4.1-3 install ok installed libjs-inherits libjs-inherits 2.0.4-1 install ok installed libjs-jquery libjs-jquery 3.5.1+dfsg+~3.5.5-7 install ok installed libjs-mathjax libjs-mathjax 2.7.9+dfsg-1 install ok installed libjs-sphinxdoc libjs-sphinxdoc 3.4.3-2 install ok installed libjs-sprintf-js libjs-sprintf-js 1.1.2+ds1-2 install ok installed libjs-underscore libjs-underscore 1.9.1~dfsg-3 install ok installed libjs-util libjs-util 0.10.3-4 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-6+deb11u4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-6+deb11u4 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-6+deb11u4 install ok installed liblapack3:amd64 liblapack3 3.9.0-3+deb11u1 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.57+dfsg-3+deb11u1 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1~deb11u1 install ok installed libmount1:amd64 libmount1 2.36.1-8+deb11u2 install ok installed libmpdec3:amd64 libmpdec3 2.5.1-1 install ok installed libncursesw6:amd64 libncursesw6 6.2+20201114-2+deb11u2 install ok installed libnettle8:amd64 libnettle8 3.7.3-1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.43.0-1+deb11u1 install ok installed libnode72:amd64 libnode72 12.22.12~dfsg-1~deb11u4 install ok installed libnotify-bin libnotify-bin 0.7.9-3 install ok installed libnotify4:amd64 libnotify4 0.7.9-3 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.22-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-9+deb11u1 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-9+deb11u1 install ok installed libpam-runtime libpam-runtime 1.4.0-9+deb11u1 install ok installed libpam0g:amd64 libpam0g 1.4.0-9+deb11u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.36-2+deb11u1 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libperl5.32:amd64 libperl5.32 5.32.1-4+deb11u3 install ok installed libpng16-16:amd64 libpng16-16 1.6.37-3 install ok installed libpsl5:amd64 libpsl5 0.21.0-1.2 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.9.2-3 install ok installed libpython3.9-minimal:amd64 libpython3.9-minimal 3.9.2-1 install ok installed libpython3.9-stdlib:amd64 libpython3.9-stdlib 3.9.2-1 install ok installed libquadmath0:amd64 libquadmath0 10.2.1-6 install ok installed libreadline8:amd64 libreadline8 8.1-1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.27+dfsg-2.1+deb11u1 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.27+dfsg-2.1+deb11u1 install ok installed libseccomp2:amd64 libseccomp2 2.5.1-1+deb11u1 install ok installed libselinux1:amd64 libselinux1 3.1-3 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b2 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-8+deb11u2 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.34.1-3 install ok installed libss2:amd64 libss2 1.46.2-2 install ok installed libssh2-1:amd64 libssh2-1 1.9.0-2+deb11u1 install ok installed libssl1.1:amd64 libssl1.1 1.1.1w-0+deb11u1 install ok installed libstdc++6:amd64 libstdc++6 10.2.1-6 install ok installed libsystemd0:amd64 libsystemd0 247.3-7+deb11u5 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2+deb11u1 install ok installed libtiff5:amd64 libtiff5 4.2.0-1+deb11u5 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-2+deb11u2 install ok installed libtirpc-common libtirpc-common 1.3.1-1+deb11u1 install ok installed libtirpc3:amd64 libtirpc3 1.3.1-1+deb11u1 install ok installed libudev1:amd64 libudev1 247.3-7+deb11u5 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-8+deb11u2 install ok installed libuv1:amd64 libuv1 1.40.0-2+deb11u1 install ok installed libwebp6:amd64 libwebp6 0.6.1-2.1+deb11u2 install ok installed libxml2:amd64 libxml2 2.9.10+dfsg-6.7+deb11u4 install ok installed libxxhash0:amd64 libxxhash0 0.8.0-2 install ok installed libyaml-0-2:amd64 libyaml-0-2 0.2.2-1 install ok installed libzstd1:amd64 libzstd1 1.4.8+dfsg-2.1 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.46.2-2 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed media-types media-types 4.0.0 install ok installed mocha mocha 8.2.1+ds1+~cs29.4.27-3 install ok installed mount mount 2.36.1-8+deb11u2 install ok installed ncurses-base ncurses-base 6.2+20201114-2+deb11u2 install ok installed ncurses-bin ncurses-bin 6.2+20201114-2+deb11u2 install ok installed node-ansi-colors node-ansi-colors 4.1.1-2 install ok installed node-ansi-regex node-ansi-regex 5.0.1-1~deb11u1 install ok installed node-ansi-styles node-ansi-styles 4.2.1-1 install ok installed node-anymatch node-anymatch 3.1.1+~2.2.2-1 install ok installed node-argparse node-argparse 2.0.1-1 install ok installed node-assert node-assert 1.5.0-1 install ok installed node-async-each node-async-each 1.0.3-1 install ok installed node-balanced-match node-balanced-match 1.0.0-1 install ok installed node-binary-extensions node-binary-extensions 2.2.0-1 install ok installed node-brace-expansion node-brace-expansion 2.0.0-1 install ok installed node-braces node-braces 3.0.2+~3.0.0-1 install ok installed node-browser-stdout node-browser-stdout 1.3.1-2 install ok installed node-camelcase node-camelcase 6.2.0-2 install ok installed node-chalk node-chalk 4.1.0-1 install ok installed node-chokidar node-chokidar 3.4.3-3 install ok installed node-cliui node-cliui 4.1.0-2 install ok installed node-clone node-clone 2.1.2-2 install ok installed node-color-convert node-color-convert 1.9.3-1 install ok installed node-color-name node-color-name 1.1.4+~1.1.1-1 install ok installed node-commander node-commander 6.2.1-2 install ok installed node-d3 node-d3 5.16.0-4 install ok installed node-d3-array node-d3-array 1.2.4-3 install ok installed node-d3-axis node-d3-axis 1.0.12-3 install ok installed node-d3-brush node-d3-brush 1.1.5-2 install ok installed node-d3-chord node-d3-chord 1.0.6-3 install ok installed node-d3-collection node-d3-collection 1.0.7-3 install ok installed node-d3-color node-d3-color 1.2.8-2 install ok installed node-d3-contour node-d3-contour 1.3.2-4 install ok installed node-d3-dispatch node-d3-dispatch 1.0.6-2 install ok installed node-d3-drag node-d3-drag 1.2.5-2 install ok installed node-d3-dsv node-d3-dsv 1.1.1-5 install ok installed node-d3-ease node-d3-ease 1.0.5-3 install ok installed node-d3-fetch node-d3-fetch 1.2.0-1 install ok installed node-d3-force node-d3-force 1.2.1-2 install ok installed node-d3-format node-d3-format 1:1.4.1-3 install ok installed node-d3-geo node-d3-geo 1.11.9-4 install ok installed node-d3-hierarchy node-d3-hierarchy 1.1.8-3 install ok installed node-d3-interpolate node-d3-interpolate 1.4.0-2 install ok installed node-d3-path node-d3-path 1.0.9-2 install ok installed node-d3-polygon node-d3-polygon 1.0.5-3 install ok installed node-d3-quadtree node-d3-quadtree 1.0.7-2 install ok installed node-d3-queue node-d3-queue 3.0.7-11 install ok installed node-d3-random node-d3-random 1.1.2-3 install ok installed node-d3-scale node-d3-scale 2.2.2-3 install ok installed node-d3-scale-chromatic node-d3-scale-chromatic 1.5.0-2 install ok installed node-d3-selection node-d3-selection 1.4.0-6 install ok installed node-d3-shape node-d3-shape 1.3.7-2 install ok installed node-d3-time node-d3-time 1.0.11-4 install ok installed node-d3-time-format node-d3-time-format 2.1.3-3 install ok installed node-d3-timer node-d3-timer 1.0.10-1 install ok installed node-d3-transition node-d3-transition 1.3.2-3 install ok installed node-d3-voronoi node-d3-voronoi 1.1.4-3 install ok installed node-d3-zoom node-d3-zoom 1.8.3-2 install ok installed node-dagre-d3-renderer node-dagre-d3-renderer 0.6.4+dfsg-3 install ok installed node-dagre-layout node-dagre-layout 0.8.8+really0.8.5+dfsg-4 install ok installed node-debug node-debug 4.3.1+~cs4.1.5-1 install ok installed node-decamelize node-decamelize 4.0.0-1 install ok installed node-defaults node-defaults 1.0.3-2 install ok installed node-diff node-diff 4.0.2~dfsg-2 install ok installed node-end-of-stream node-end-of-stream 1.4.4-1 install ok installed node-escape-string-regexp node-escape-string-regexp 4.0.0-1 install ok installed node-esprima node-esprima 4.0.1+ds+~4.0.2-2 install ok installed node-execa node-execa 4.1.0+dfsg+~cs19.3.6-5 install ok installed node-fill-range node-fill-range 7.0.1-2 install ok installed node-find-up node-find-up 5.0.0-1 install ok installed node-fs.realpath node-fs.realpath 1.0.0-1.1 install ok installed node-get-caller-file node-get-caller-file 1.0.2-1.1 install ok installed node-get-stream node-get-stream 6.0.0-1 install ok installed node-glob node-glob 7.1.6+~7.1.3-1 install ok installed node-glob-parent node-glob-parent 5.1.1+~5.1.0-2 install ok installed node-graceful-fs node-graceful-fs 4.2.4+repack-1 install ok installed node-graphlibrary node-graphlibrary 2.2.0+really2.1.8+dfsg-3 install ok installed node-growl node-growl 1.10.5-2 install ok installed node-has-flag node-has-flag 4.0.0-1 install ok installed node-he node-he 1.2.0-1 install ok installed node-iconv-lite node-iconv-lite 0.5.1-3 install ok installed node-inflight node-inflight 1.0.6-1.1 install ok installed node-inherits node-inherits 2.0.4-1 install ok installed node-invert-kv node-invert-kv 3.0.1-1 install ok installed node-is-binary-path node-is-binary-path 2.1.0-1 install ok installed node-is-buffer node-is-buffer 2.0.5-1 install ok installed node-is-extglob node-is-extglob 2.1.1-1 install ok installed node-is-glob node-is-glob 4.0.1-1 install ok installed node-is-number node-is-number 7.0.0-1.1 install ok installed node-is-plain-obj node-is-plain-obj 3.0.0-1 install ok installed node-is-stream node-is-stream 2.0.0-1 install ok installed node-isexe node-isexe 2.0.0-5 install ok installed node-js-yaml node-js-yaml 3.14.1+dfsg+~3.12.6-2 install ok installed node-kind-of node-kind-of 6.0.3+dfsg-1 install ok installed node-lcid node-lcid 3.1.1-1 install ok installed node-locate-path node-locate-path 6.0.0-1 install ok installed node-lodash node-lodash 4.17.21+dfsg+~cs8.31.173-1 install ok installed node-mem node-mem 1.1.0-1.1 install ok installed node-merge-stream node-merge-stream 2.0.0+~1.1.2-1 install ok installed node-mimic-fn node-mimic-fn 3.1.0-1 install ok installed node-minimatch node-minimatch 3.0.4+~3.0.3-1+deb11u2 install ok installed node-ms node-ms 2.1.3+~cs0.7.31-1 install ok installed node-normalize-path node-normalize-path 3.0.0-2 install ok installed node-npm-run-path node-npm-run-path 2.0.2-2 install ok installed node-object-assign node-object-assign 4.1.1-3 install ok installed node-once node-once 1.4.0-3 install ok installed node-os-locale node-os-locale 5.0.0-1 install ok installed node-p-limit node-p-limit 3.1.0+~cs2.3.0-1 install ok installed node-p-locate node-p-locate 5.0.0-1 install ok installed node-path-dirname node-path-dirname 1.0.2-1.1 install ok installed node-path-exists node-path-exists 4.0.0-2 install ok installed node-path-is-absolute node-path-is-absolute 2.0.0-1 install ok installed node-pump node-pump 3.0.0-4 install ok installed node-randombytes node-randombytes 2.1.0-1 install ok installed node-readdirp node-readdirp 3.5.0-2 install ok installed node-repeat-string node-repeat-string 1.6.1-1 install ok installed node-require-directory node-require-directory 2.1.1-1.1 install ok installed node-require-main-filename node-require-main-filename 2.0.0-1 install ok installed node-rw node-rw 1.3.3-2 install ok installed node-safe-buffer node-safe-buffer 5.2.1+~cs2.1.2-1 install ok installed node-serialize-javascript node-serialize-javascript 5.0.1-2 install ok installed node-set-blocking node-set-blocking 2.0.0-1.1 install ok installed node-set-immediate-shim node-set-immediate-shim 2.0.0-1 install ok installed node-shebang-command node-shebang-command 1.2.0-1.1 install ok installed node-shebang-regex node-shebang-regex 3.0.0-1 install ok installed node-signal-exit node-signal-exit 3.0.3-1 install ok installed node-sprintf-js node-sprintf-js 1.1.2+ds1-2 install ok installed node-string-width node-string-width 4.2.0-1 install ok installed node-strip-ansi node-strip-ansi 6.0.0-2 install ok installed node-strip-json-comments node-strip-json-comments 3.1.1-1 install ok installed node-supports-color node-supports-color 8.1.0+~7.2.0-1 install ok installed node-to-regex-range node-to-regex-range 5.0.1-2 install ok installed node-util node-util 0.10.3-4 install ok installed node-wcwidth.js node-wcwidth.js 1.0.0-1.1 install ok installed node-which node-which 2.0.2+~cs1.3.2-1 install ok installed node-which-module node-which-module 2.0.0-1 install ok installed node-wide-align node-wide-align 1.1.3-1 install ok installed node-wrap-ansi node-wrap-ansi 4.0.0-2 install ok installed node-wrappy node-wrappy 1.0.2-1.1 install ok installed node-y18n node-y18n 4.0.0-4 install ok installed node-yargs node-yargs 15.3.1+repack-2 install ok installed node-yargs-parser node-yargs-parser 18.1.3+~15.0.0-1 install ok installed nodejs nodejs 12.22.12~dfsg-1~deb11u4 install ok installed openssl openssl 1.1.1w-0+deb11u1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl perl 5.32.1-4+deb11u3 install ok installed perl-base perl-base 5.32.1-4+deb11u3 install ok installed perl-modules-5.32 perl-modules-5.32 5.32.1-4+deb11u3 install ok installed python3 python3 3.9.2-3 install ok installed python3-appdirs python3-appdirs 1.4.4-1 install ok installed python3-attr python3-attr 20.3.0-1 install ok installed python3-certifi python3-certifi 2020.6.20-1 install ok installed python3-chardet python3-chardet 4.0.0-1 install ok installed python3-configargparse python3-configargparse 1.2.3-1 install ok installed python3-datrie:amd64 python3-datrie 0.8.2-1+b1 install ok installed python3-distutils python3-distutils 3.9.2-1 install ok installed python3-docutils python3-docutils 0.16+dfsg-4 install ok installed python3-git python3-git 3.1.14-1 install ok installed python3-gitdb python3-gitdb 4.0.5-1 install ok installed python3-idna python3-idna 2.10-1+deb11u1 install ok installed python3-importlib-metadata python3-importlib-metadata 1.6.0-2 install ok installed python3-ipython-genutils python3-ipython-genutils 0.2.0-4 install ok installed python3-jsonschema python3-jsonschema 3.2.0-3 install ok installed python3-jupyter-core python3-jupyter-core 4.7.1-1+deb11u1 install ok installed python3-lib2to3 python3-lib2to3 3.9.2-1 install ok installed python3-minimal python3-minimal 3.9.2-3 install ok installed python3-more-itertools python3-more-itertools 4.2.0-3 install ok installed python3-nbformat python3-nbformat 5.1.2-1 install ok installed python3-pkg-resources python3-pkg-resources 52.0.0-4 install ok installed python3-psutil python3-psutil 5.8.0-1 install ok installed python3-pulp python3-pulp 1.6.0+dfsg1-5 install ok installed python3-pyparsing python3-pyparsing 2.4.7-1 install ok installed python3-pyrsistent:amd64 python3-pyrsistent 0.15.5-1+b3 install ok installed python3-ratelimiter python3-ratelimiter 1.2.0.post0-1 install ok installed python3-requests python3-requests 2.25.1+dfsg-2 install ok installed python3-roman python3-roman 2.0.0-5 install ok installed python3-setuptools python3-setuptools 52.0.0-4 install ok installed python3-six python3-six 1.16.0-2 install ok installed python3-smmap python3-smmap 4.0.0-1 install ok installed python3-toposort python3-toposort 1.6-1 install ok installed python3-traitlets python3-traitlets 5.0.5-1 install ok installed python3-urllib3 python3-urllib3 1.26.5-1~exp1 install ok installed python3-wrapt python3-wrapt 1.12.1-4+b1 install ok installed python3-yaml python3-yaml 5.3.1-5 install ok installed python3-zipp python3-zipp 1.0.0-3 install ok installed python3.9 python3.9 3.9.2-1 install ok installed python3.9-minimal python3.9-minimal 3.9.2-1 install ok installed readline-common readline-common 8.1-1 install ok installed sed sed 4.7-1 install ok installed sgml-base sgml-base 1.30 install ok installed shared-mime-info shared-mime-info 2.0-1 install ok installed snakemake snakemake 5.24.1-2 install ok installed sphinx-rtd-theme-common sphinx-rtd-theme-common 0.5.1+dfsg-1 install ok installed sysvinit-utils sysvinit-utils 2.96-7+deb11u1 install ok installed tar tar 1.34+dfsg-1+deb11u1 install ok installed tzdata tzdata 2024a-0+deb11u1 install ok installed util-linux util-linux 2.36.1-8+deb11u2 install ok installed xml-core xml-core 0.18+nmu1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2+deb11u2 0m54.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m54.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', 'remove', 'ca-certificates', 'coinor-cbc', 'coinor-libcbc3:amd64', 'coinor-libcgl1', 'coinor-libclp1', 'coinor-libcoinutils3v5', 'coinor-libosi1v5:amd64', 'docutils-common', 'fonts-font-awesome', 'fonts-glyphicons-halflings', 'fonts-lato', 'fonts-mathjax', 'git', 'git-man', 'libblas3:amd64', 'libbrotli1:amd64', 'libc-ares2:amd64', 'libcurl3-gnutls:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'liberror-perl', 'libexpat1:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libicu67:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootstrap', 'libjs-d3', 'libjs-d3-format', 'libjs-inherits', 'libjs-jquery', 'libjs-mathjax', 'libjs-sphinxdoc', 'libjs-sprintf-js', 'libjs-underscore', 'libjs-util', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnode72:amd64', 'libnotify-bin', 'libnotify4:amd64', 'libperl5.32:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libtiff5:amd64', 'libuv1:amd64', 'libwebp6:amd64', 'libxml2:amd64', 'libyaml-0-2:amd64', 'media-types', 'mocha', 'node-ansi-colors', 'node-ansi-regex', 'node-ansi-styles', 'node-anymatch', 'node-argparse', 'node-assert', 'node-async-each', 'node-balanced-match', 'node-binary-extensions', 'node-brace-expansion', 'node-braces', 'node-browser-stdout', 'node-camelcase', 'node-chalk', 'node-chokidar', 'node-cliui', 'node-clone', 'node-color-convert', 'node-color-name', 'node-commander', 'node-d3', 'node-d3-array', 'node-d3-axis', 'node-d3-brush', 'node-d3-chord', 'node-d3-collection', 'node-d3-color', 'node-d3-contour', 'node-d3-dispatch', 'node-d3-drag', 'node-d3-dsv', 'node-d3-ease', 'node-d3-fetch', 'node-d3-force', 'node-d3-format', 'node-d3-geo', 'node-d3-hierarchy', 'node-d3-interpolate', 'node-d3-path', 'node-d3-polygon', 'node-d3-quadtree', 'node-d3-queue', 'node-d3-random', 'node-d3-scale', 'node-d3-scale-chromatic', 'node-d3-selection', 'node-d3-shape', 'node-d3-time', 'node-d3-time-format', 'node-d3-timer', 'node-d3-transition', 'node-d3-voronoi', 'node-d3-zoom', 'node-dagre-d3-renderer', 'node-dagre-layout', 'node-debug', 'node-decamelize', 'node-defaults', 'node-diff', 'node-end-of-stream', 'node-escape-string-regexp', 'node-esprima', 'node-execa', 'node-fill-range', 'node-find-up', 'node-fs.realpath', 'node-get-caller-file', 'node-get-stream', 'node-glob', 'node-glob-parent', 'node-graceful-fs', 'node-graphlibrary', 'node-growl', 'node-has-flag', 'node-he', 'node-iconv-lite', 'node-inflight', 'node-inherits', 'node-invert-kv', 'node-is-binary-path', 'node-is-buffer', 'node-is-extglob', 'node-is-glob', 'node-is-number', 'node-is-plain-obj', 'node-is-stream', 'node-isexe', 'node-js-yaml', 'node-kind-of', 'node-lcid', 'node-locate-path', 'node-lodash', 'node-mem', 'node-merge-stream', 'node-mimic-fn', 'node-minimatch', 'node-ms', 'node-normalize-path', 'node-npm-run-path', 'node-object-assign', 'node-once', 'node-os-locale', 'node-p-limit', 'node-p-locate', 'node-path-dirname', 'node-path-exists', 'node-path-is-absolute', 'node-pump', 'node-randombytes', 'node-readdirp', 'node-repeat-string', 'node-require-directory', 'node-require-main-filename', 'node-rw', 'node-safe-buffer', 'node-serialize-javascript', 'node-set-blocking', 'node-set-immediate-shim', 'node-shebang-command', 'node-shebang-regex', 'node-signal-exit', 'node-sprintf-js', 'node-string-width', 'node-strip-ansi', 'node-strip-json-comments', 'node-supports-color', 'node-to-regex-range', 'node-util', 'node-wcwidth.js', 'node-which', 'node-which-module', 'node-wide-align', 'node-wrap-ansi', 'node-wrappy', 'node-y18n', 'node-yargs', 'node-yargs-parser', 'nodejs', 'openssl', 'perl', 'perl-modules-5.32', 'python3', 'python3-appdirs', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-configargparse', 'python3-datrie:amd64', 'python3-distutils', 'python3-docutils', 'python3-git', 'python3-gitdb', 'python3-idna', 'python3-importlib-metadata', 'python3-ipython-genutils', 'python3-jsonschema', 'python3-jupyter-core', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-nbformat', 'python3-pkg-resources', 'python3-psutil', 'python3-pulp', 'python3-pyparsing', 'python3-pyrsistent:amd64', 'python3-ratelimiter', 'python3-requests', 'python3-roman', 'python3-setuptools', 'python3-six', 'python3-smmap', 'python3-toposort', 'python3-traitlets', 'python3-urllib3', 'python3-wrapt', 'python3-yaml', 'python3-zipp', 'python3.9', 'python3.9-minimal', 'readline-common', 'sgml-base', 'shared-mime-info', 'sphinx-rtd-theme-common', 'xml-core', 'snakemake'] 1m0.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: ca-certificates coinor-cbc coinor-libcbc3 coinor-libcgl1 coinor-libclp1 coinor-libcoinutils3v5 coinor-libosi1v5 docutils-common fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-mathjax git git-man libblas3 libbrotli1 libc-ares2 libcurl3-gnutls libdatrie1 libdeflate0 liberror-perl libexpat1 libgdbm-compat4 libgdbm6 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0 libicu67 libjbig0 libjpeg62-turbo libjs-bootstrap libjs-d3 libjs-d3-format libjs-inherits libjs-jquery libjs-mathjax libjs-sphinxdoc libjs-sprintf-js libjs-underscore libjs-util liblapack3 libldap-2.4-2 libmpdec3 libncursesw6 libnghttp2-14 libnode72 libnotify-bin libnotify4 libperl5.32 libpng16-16 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libtiff5 libuv1 libwebp6 libxml2 libyaml-0-2 media-types mocha node-ansi-colors node-ansi-regex node-ansi-styles node-anymatch node-argparse node-assert node-async-each node-balanced-match node-binary-extensions node-brace-expansion node-braces node-browser-stdout node-camelcase node-chalk node-chokidar node-cliui node-clone node-color-convert node-color-name node-commander node-d3 node-d3-array node-d3-axis node-d3-brush node-d3-chord node-d3-collection node-d3-color node-d3-contour node-d3-dispatch node-d3-drag node-d3-dsv node-d3-ease node-d3-fetch node-d3-force node-d3-format node-d3-geo node-d3-hierarchy node-d3-interpolate node-d3-path node-d3-polygon node-d3-quadtree node-d3-queue node-d3-random node-d3-scale node-d3-scale-chromatic node-d3-selection node-d3-shape node-d3-time node-d3-time-format node-d3-timer node-d3-transition node-d3-voronoi node-d3-zoom node-dagre-d3-renderer node-dagre-layout node-debug node-decamelize node-defaults node-diff node-end-of-stream node-escape-string-regexp node-esprima node-execa node-fill-range node-find-up node-fs.realpath node-get-caller-file node-get-stream node-glob node-glob-parent node-graceful-fs node-graphlibrary node-growl node-has-flag node-he node-iconv-lite node-inflight node-inherits node-invert-kv node-is-binary-path node-is-buffer node-is-extglob node-is-glob node-is-number node-is-plain-obj node-is-stream node-isexe node-js-yaml node-kind-of node-lcid node-locate-path node-lodash node-mem node-merge-stream node-mimic-fn node-minimatch node-ms node-normalize-path node-npm-run-path node-object-assign node-once node-os-locale node-p-limit node-p-locate node-path-dirname node-path-exists node-path-is-absolute node-pump node-randombytes node-readdirp node-repeat-string node-require-directory node-require-main-filename node-rw node-safe-buffer node-serialize-javascript node-set-blocking node-set-immediate-shim node-shebang-command node-shebang-regex node-signal-exit node-sprintf-js node-string-width node-strip-ansi node-strip-json-comments node-supports-color node-to-regex-range node-util node-wcwidth.js node-which node-which-module node-wide-align node-wrap-ansi node-wrappy node-y18n node-yargs node-yargs-parser nodejs openssl perl perl-modules-5.32 python3 python3-appdirs python3-attr python3-certifi python3-chardet python3-configargparse python3-datrie python3-distutils python3-docutils python3-git python3-gitdb python3-idna python3-importlib-metadata python3-ipython-genutils python3-jsonschema python3-jupyter-core python3-lib2to3 python3-minimal python3-more-itertools python3-nbformat python3-pkg-resources python3-psutil python3-pulp python3-pyparsing python3-pyrsistent python3-ratelimiter python3-requests python3-roman python3-setuptools python3-six python3-smmap python3-toposort python3-traitlets python3-urllib3 python3-wrapt python3-yaml python3-zipp python3.9 python3.9-minimal readline-common sgml-base shared-mime-info snakemake sphinx-rtd-theme-common xml-core 0 upgraded, 0 newly installed, 255 to remove and 0 not upgraded. After this operation, 342 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 23289 files and directories currently installed.) Removing snakemake (5.24.1-2) ... Removing python3-requests (2.25.1+dfsg-2) ... Removing python3-pulp (1.6.0+dfsg1-5) ... Removing coinor-cbc (2.10.5+ds1-3) ... Removing coinor-libcbc3:amd64 (2.10.5+ds1-3) ... Removing coinor-libcgl1 (0.60.3+repack1-2) ... Removing coinor-libclp1 (1.17.5+repack1-1) ... Removing coinor-libosi1v5:amd64 (0.108.6+repack1-2) ... Removing coinor-libcoinutils3v5 (2.11.4+repack1-1) ... Removing python3-docutils (0.16+dfsg-4) ... Removing docutils-common (0.16+dfsg-4) ... Removing sphinx-rtd-theme-common (0.5.1+dfsg-1) ... Removing fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Removing libjs-bootstrap (3.4.1+dfsg-2) ... Removing fonts-glyphicons-halflings (1.009~3.4.1+dfsg-2) ... Removing fonts-lato (2.0-2.1) ... Removing libjs-mathjax (2.7.9+dfsg-1) ... Removing fonts-mathjax (2.7.9+dfsg-1) ... Removing python3-git (3.1.14-1) ... Removing git (1:2.30.2-1+deb11u2) ... Removing git-man (1:2.30.2-1+deb11u2) ... Removing liblapack3:amd64 (3.9.0-3+deb11u1) ... Removing libblas3:amd64 (3.9.0-3+deb11u1) ... Removing node-dagre-d3-renderer (0.6.4+dfsg-3) ... Removing node-dagre-layout (0.8.8+really0.8.5+dfsg-4) ... Removing node-graphlibrary (2.2.0+really2.1.8+dfsg-3) ... Removing mocha (8.2.1+ds1+~cs29.4.27-3) ... Removing node-yargs (15.3.1+repack-2) ... Removing node-yargs-parser (18.1.3+~15.0.0-1) ... Removing node-y18n (4.0.0-4) ... Removing libcurl3-gnutls:amd64 (7.74.0-1.3+deb11u12) ... Removing python3-datrie:amd64 (0.8.2-1+b1) ... Removing libdatrie1:amd64 (0.2.13-1) ... Removing node-growl (1.10.5-2) ... Removing libnotify-bin (0.7.9-3) ... Removing libnotify4:amd64 (0.7.9-3) ... Removing libgdk-pixbuf-2.0-0:amd64 (2.42.2+dfsg-1+deb11u2) ... Removing libtiff5:amd64 (4.2.0-1+deb11u5) ... Removing libdeflate0:amd64 (1.7-1) ... Removing liberror-perl (0.17029-1) ... Removing python3-yaml (5.3.1-5) ... Removing python3-nbformat (5.1.2-1) ... Removing python3-jsonschema (3.2.0-3) ... Removing python3-setuptools (52.0.0-4) ... Removing python3-jupyter-core (4.7.1-1+deb11u1) ... Removing python3-distutils (3.9.2-1) ... Removing python3-wrapt (1.12.1-4+b1) ... Removing python3-traitlets (5.0.5-1) ... Removing perl (5.32.1-4+deb11u3) ... Removing libperl5.32:amd64 (5.32.1-4+deb11u3) ... Removing libgdbm-compat4:amd64 (1.19-2) ... Removing libgdbm6:amd64 (1.19-2) ... Removing libgdk-pixbuf2.0-common (2.42.2+dfsg-1+deb11u2) ... Removing libgfortran5:amd64 (10.2.1-6) ... Removing shared-mime-info (2.0-1) ... Removing libglib2.0-0:amd64 (2.66.8-1+deb11u4) ... Removing libxml2:amd64 (2.9.10+dfsg-6.7+deb11u4) ... Removing libjbig0:amd64 (2.1-3.1+b2) ... Removing libjpeg62-turbo:amd64 (1:2.0.6-4) ... Removing libjs-d3 (3.5.17-4) ... Removing node-d3 (5.16.0-4) ... Removing node-d3-scale (2.2.2-3) ... Removing node-d3-format (1:1.4.1-3) ... Removing libjs-d3-format (1:1.4.1-3) ... Removing node-assert (1.5.0-1) ... Removing node-util (0.10.3-4) ... Removing libjs-util (0.10.3-4) ... Removing node-glob (7.1.6+~7.1.3-1) ... Removing libjs-sphinxdoc (3.4.3-2) ... Removing libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Removing node-js-yaml (3.14.1+dfsg+~3.12.6-2) ... Removing node-argparse (2.0.1-1) ... Removing node-sprintf-js (1.1.2+ds1-2) ... Removing libjs-sprintf-js (1.1.2+ds1-2) ... Removing libjs-underscore (1.9.1~dfsg-3) ... Removing libldap-2.4-2:amd64 (2.4.57+dfsg-3+deb11u1) ... Removing libpng16-16:amd64 (1.6.37-3) ... Removing libpsl5:amd64 (0.21.0-1.2) ... Removing libquadmath0:amd64 (10.2.1-6) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Removing libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Removing libssh2-1:amd64 (1.9.0-2+deb11u1) ... Removing libwebp6:amd64 (0.6.1-2.1+deb11u2) ... Removing libyaml-0-2:amd64 (0.2.2-1) ... Removing node-ansi-colors (4.1.1-2) ... Removing node-cliui (4.1.0-2) ... Removing node-wrap-ansi (4.0.0-2) ... Removing node-wide-align (1.1.3-1) ... Removing node-string-width (4.2.0-1) ... Removing node-strip-ansi (6.0.0-2) ... Removing node-ansi-regex (5.0.1-1~deb11u1) ... Removing node-chalk (4.1.0-1) ... Removing node-ansi-styles (4.2.1-1) ... Removing node-chokidar (3.4.3-3) ... Removing node-readdirp (3.5.0-2) ... Removing node-anymatch (3.1.1+~2.2.2-1) ... Removing node-async-each (1.0.3-1) ... Removing node-minimatch (3.0.4+~3.0.3-1+deb11u2) ... Removing node-brace-expansion (2.0.0-1) ... Removing node-balanced-match (1.0.0-1) ... Removing node-is-binary-path (2.1.0-1) ... Removing node-binary-extensions (2.2.0-1) ... Removing node-braces (3.0.2+~3.0.0-1) ... Removing node-browser-stdout (1.3.1-2) ... Removing node-camelcase (6.2.0-2) ... Removing node-wcwidth.js (1.0.0-1.1) ... Removing node-defaults (1.0.3-2) ... Removing node-clone (2.1.2-2) ... Removing node-color-convert (1.9.3-1) ... Removing node-color-name (1.1.4+~1.1.1-1) ... Removing node-d3-fetch (1.2.0-1) ... Removing node-d3-dsv (1.1.1-5) ... Removing node-commander (6.2.1-2) ... Removing node-d3-geo (1.11.9-4) ... Removing node-d3-axis (1.0.12-3) ... Removing node-d3-brush (1.1.5-2) ... Removing node-d3-chord (1.0.6-3) ... Removing node-d3-force (1.2.1-2) ... Removing node-d3-collection (1.0.7-3) ... Removing node-d3-zoom (1.8.3-2) ... Removing node-d3-transition (1.3.2-3) ... Removing node-d3-scale-chromatic (1.5.0-2) ... Removing node-d3-contour (1.3.2-4) ... Removing node-d3-drag (1.2.5-2) ... Removing node-d3-dispatch (1.0.6-2) ... Removing node-d3-ease (1.0.5-3) ... Removing node-d3-hierarchy (1.1.8-3) ... Removing node-d3-shape (1.3.7-2) ... Removing node-d3-path (1.0.9-2) ... Removing node-d3-polygon (1.0.5-3) ... Removing node-d3-quadtree (1.0.7-2) ... Removing node-rw (1.3.3-2) ... Removing node-d3-queue (3.0.7-11) ... Removing node-d3-random (1.1.2-3) ... Removing node-d3-selection (1.4.0-6) ... Removing node-d3-time-format (2.1.3-3) ... Removing node-d3-time (1.0.11-4) ... Removing node-d3-timer (1.0.10-1) ... Removing node-d3-voronoi (1.1.4-3) ... Removing node-debug (4.3.1+~cs4.1.5-1) ... Removing node-decamelize (4.0.0-1) ... Removing node-diff (4.0.2~dfsg-2) ... Removing node-os-locale (5.0.0-1) ... Removing node-execa (4.1.0+dfsg+~cs19.3.6-5) ... Removing node-get-stream (6.0.0-1) ... Removing node-pump (3.0.0-4) ... Removing node-end-of-stream (1.4.4-1) ... Removing node-escape-string-regexp (4.0.0-1) ... Removing node-esprima (4.0.1+ds+~4.0.2-2) ... Removing node-fill-range (7.0.1-2) ... Removing node-find-up (5.0.0-1) ... Removing node-fs.realpath (1.0.0-1.1) ... Removing node-get-caller-file (1.0.2-1.1) ... Removing node-glob-parent (5.1.1+~5.1.0-2) ... Removing node-graceful-fs (4.2.4+repack-1) ... Removing node-supports-color (8.1.0+~7.2.0-1) ... Removing node-has-flag (4.0.0-1) ... Removing node-he (1.2.0-1) ... Removing node-iconv-lite (0.5.1-3) ... Removing node-inflight (1.0.6-1.1) ... Removing node-lcid (3.1.1-1) ... Removing node-invert-kv (3.0.1-1) ... Removing node-to-regex-range (5.0.1-2) ... Removing node-is-number (7.0.0-1.1) ... Removing node-kind-of (6.0.3+dfsg-1) ... Removing node-is-buffer (2.0.5-1) ... Removing node-is-glob (4.0.1-1) ... Removing node-is-extglob (2.1.1-1) ... Removing node-is-plain-obj (3.0.0-1) ... Removing node-is-stream (2.0.0-1) ... Removing node-which (2.0.2+~cs1.3.2-1) ... Removing node-isexe (2.0.0-5) ... Removing node-locate-path (6.0.0-1) ... Removing node-lodash (4.17.21+dfsg+~cs8.31.173-1) ... Removing node-mem (1.1.0-1.1) ... Removing node-merge-stream (2.0.0+~1.1.2-1) ... Removing node-mimic-fn (3.1.0-1) ... Removing node-ms (2.1.3+~cs0.7.31-1) ... Removing node-normalize-path (3.0.0-2) ... Removing node-npm-run-path (2.0.2-2) ... Removing node-object-assign (4.1.1-3) ... Removing node-once (1.4.0-3) ... Removing node-p-locate (5.0.0-1) ... Removing node-p-limit (3.1.0+~cs2.3.0-1) ... Removing node-path-dirname (1.0.2-1.1) ... Removing node-path-exists (4.0.0-2) ... Removing node-path-is-absolute (2.0.0-1) ... Removing node-serialize-javascript (5.0.1-2) ... Removing node-randombytes (2.1.0-1) ... Removing node-repeat-string (1.6.1-1) ... Removing node-require-directory (2.1.1-1.1) ... Removing node-require-main-filename (2.0.0-1) ... Removing node-safe-buffer (5.2.1+~cs2.1.2-1) ... Removing node-set-blocking (2.0.0-1.1) ... Removing node-set-immediate-shim (2.0.0-1) ... Removing node-shebang-command (1.2.0-1.1) ... Removing node-shebang-regex (3.0.0-1) ... Removing node-signal-exit (3.0.3-1) ... Removing node-strip-json-comments (3.1.1-1) ... Removing node-which-module (2.0.0-1) ... Removing node-wrappy (1.0.2-1.1) ... Removing perl-modules-5.32 (5.32.1-4+deb11u3) ... Removing python3-appdirs (1.4.4-1) ... Removing python3-attr (20.3.0-1) ... Removing python3-certifi (2020.6.20-1) ... Removing python3-chardet (4.0.0-1) ... Removing python3-configargparse (1.2.3-1) ... Removing python3-gitdb (4.0.5-1) ... Removing python3-idna (2.10-1+deb11u1) ... Removing python3-importlib-metadata (1.6.0-2) ... Removing python3-ipython-genutils (0.2.0-4) ... Removing python3-lib2to3 (3.9.2-1) ... Removing python3-zipp (1.0.0-3) ... Removing python3-more-itertools (4.2.0-3) ... Removing python3-pkg-resources (52.0.0-4) ... Removing python3-psutil (5.8.0-1) ... Removing python3-pyparsing (2.4.7-1) ... Removing python3-pyrsistent:amd64 (0.15.5-1+b3) ... Removing python3-ratelimiter (1.2.0.post0-1) ... Removing python3-roman (2.0.0-5) ... Removing python3-urllib3 (1.26.5-1~exp1) ... Removing python3-six (1.16.0-2) ... Removing python3-smmap (4.0.0-1) ... Removing python3-toposort (1.6-1) ... Removing xml-core (0.18+nmu1) ... Removing sgml-base (1.30) ... Removing ca-certificates (20210119) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing python3 (3.9.2-3) ... Removing python3-minimal (3.9.2-3) ... Removing python3.9 (3.9.2-1) ... Removing python3.9-minimal (3.9.2-1) ... Removing libexpat1:amd64 (2.2.10-2+deb11u5) ... Removing node-inherits (2.0.4-1) ... Removing libjs-inherits (2.0.4-1) ... Removing libpython3-stdlib:amd64 (3.9.2-3) ... Removing libpython3.9-stdlib:amd64 (3.9.2-1) ... find: '/usr/lib/python3': No such file or directory Removing libmpdec3:amd64 (2.5.1-1) ... Removing libncursesw6:amd64 (6.2+20201114-2+deb11u2) ... Removing libpython3.9-minimal:amd64 (3.9.2-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8:amd64 (8.1-1) ... Removing libsqlite3-0:amd64 (3.34.1-3) ... Removing media-types (4.0.0) ... Removing node-d3-array (1.2.4-3) ... Removing node-d3-interpolate (1.4.0-2) ... Removing node-d3-color (1.2.8-2) ... Removing openssl (1.1.1w-0+deb11u1) ... Removing readline-common (8.1-1) ... Removing nodejs (12.22.12~dfsg-1~deb11u4) ... Removing libnode72:amd64 (12.22.12~dfsg-1~deb11u4) ... Removing libbrotli1:amd64 (1.0.9-2+b2) ... Removing libc-ares2:amd64 (1.17.1-1+deb11u3) ... Removing libicu67:amd64 (67.1-7) ... Removing libnghttp2-14:amd64 (1.43.0-1+deb11u1) ... Removing libuv1:amd64 (1.40.0-2+deb11u1) ... Processing triggers for libc-bin (2.31-13+deb11u10) ... 1m0.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', 'remove', 'ca-certificates', 'coinor-cbc', 'coinor-libcbc3:amd64', 'coinor-libcgl1', 'coinor-libclp1', 'coinor-libcoinutils3v5', 'coinor-libosi1v5:amd64', 'docutils-common', 'fonts-font-awesome', 'fonts-glyphicons-halflings', 'fonts-lato', 'fonts-mathjax', 'git', 'git-man', 'libblas3:amd64', 'libbrotli1:amd64', 'libc-ares2:amd64', 'libcurl3-gnutls:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'liberror-perl', 'libexpat1:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libicu67:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootstrap', 'libjs-d3', 'libjs-d3-format', 'libjs-inherits', 'libjs-jquery', 'libjs-mathjax', 'libjs-sphinxdoc', 'libjs-sprintf-js', 'libjs-underscore', 'libjs-util', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnode72:amd64', 'libnotify-bin', 'libnotify4:amd64', 'libperl5.32:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libtiff5:amd64', 'libuv1:amd64', 'libwebp6:amd64', 'libxml2:amd64', 'libyaml-0-2:amd64', 'media-types', 'mocha', 'node-ansi-colors', 'node-ansi-regex', 'node-ansi-styles', 'node-anymatch', 'node-argparse', 'node-assert', 'node-async-each', 'node-balanced-match', 'node-binary-extensions', 'node-brace-expansion', 'node-braces', 'node-browser-stdout', 'node-camelcase', 'node-chalk', 'node-chokidar', 'node-cliui', 'node-clone', 'node-color-convert', 'node-color-name', 'node-commander', 'node-d3', 'node-d3-array', 'node-d3-axis', 'node-d3-brush', 'node-d3-chord', 'node-d3-collection', 'node-d3-color', 'node-d3-contour', 'node-d3-dispatch', 'node-d3-drag', 'node-d3-dsv', 'node-d3-ease', 'node-d3-fetch', 'node-d3-force', 'node-d3-format', 'node-d3-geo', 'node-d3-hierarchy', 'node-d3-interpolate', 'node-d3-path', 'node-d3-polygon', 'node-d3-quadtree', 'node-d3-queue', 'node-d3-random', 'node-d3-scale', 'node-d3-scale-chromatic', 'node-d3-selection', 'node-d3-shape', 'node-d3-time', 'node-d3-time-format', 'node-d3-timer', 'node-d3-transition', 'node-d3-voronoi', 'node-d3-zoom', 'node-dagre-d3-renderer', 'node-dagre-layout', 'node-debug', 'node-decamelize', 'node-defaults', 'node-diff', 'node-end-of-stream', 'node-escape-string-regexp', 'node-esprima', 'node-execa', 'node-fill-range', 'node-find-up', 'node-fs.realpath', 'node-get-caller-file', 'node-get-stream', 'node-glob', 'node-glob-parent', 'node-graceful-fs', 'node-graphlibrary', 'node-growl', 'node-has-flag', 'node-he', 'node-iconv-lite', 'node-inflight', 'node-inherits', 'node-invert-kv', 'node-is-binary-path', 'node-is-buffer', 'node-is-extglob', 'node-is-glob', 'node-is-number', 'node-is-plain-obj', 'node-is-stream', 'node-isexe', 'node-js-yaml', 'node-kind-of', 'node-lcid', 'node-locate-path', 'node-lodash', 'node-mem', 'node-merge-stream', 'node-mimic-fn', 'node-minimatch', 'node-ms', 'node-normalize-path', 'node-npm-run-path', 'node-object-assign', 'node-once', 'node-os-locale', 'node-p-limit', 'node-p-locate', 'node-path-dirname', 'node-path-exists', 'node-path-is-absolute', 'node-pump', 'node-randombytes', 'node-readdirp', 'node-repeat-string', 'node-require-directory', 'node-require-main-filename', 'node-rw', 'node-safe-buffer', 'node-serialize-javascript', 'node-set-blocking', 'node-set-immediate-shim', 'node-shebang-command', 'node-shebang-regex', 'node-signal-exit', 'node-sprintf-js', 'node-string-width', 'node-strip-ansi', 'node-strip-json-comments', 'node-supports-color', 'node-to-regex-range', 'node-util', 'node-wcwidth.js', 'node-which', 'node-which-module', 'node-wide-align', 'node-wrap-ansi', 'node-wrappy', 'node-y18n', 'node-yargs', 'node-yargs-parser', 'nodejs', 'openssl', 'perl', 'perl-modules-5.32', 'python3', 'python3-appdirs', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-configargparse', 'python3-datrie:amd64', 'python3-distutils', 'python3-docutils', 'python3-git', 'python3-gitdb', 'python3-idna', 'python3-importlib-metadata', 'python3-ipython-genutils', 'python3-jsonschema', 'python3-jupyter-core', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-nbformat', 'python3-pkg-resources', 'python3-psutil', 'python3-pulp', 'python3-pyparsing', 'python3-pyrsistent:amd64', 'python3-ratelimiter', 'python3-requests', 'python3-roman', 'python3-setuptools', 'python3-six', 'python3-smmap', 'python3-toposort', 'python3-traitlets', 'python3-urllib3', 'python3-wrapt', 'python3-yaml', 'python3-zipp', 'python3.9', 'python3.9-minimal', 'readline-common', 'sgml-base', 'shared-mime-info', 'sphinx-rtd-theme-common', 'xml-core', 'snakemake'] 1m0.9s INFO: Running scripts post_remove 1m0.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_remove_exceptions'] 1m0.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_remove_exceptions'] 1m0.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg', '--purge', 'ca-certificates', 'coinor-cbc', 'coinor-libcbc3:amd64', 'coinor-libcgl1', 'coinor-libclp1', 'coinor-libcoinutils3v5', 'coinor-libosi1v5:amd64', 'docutils-common', 'fonts-font-awesome', 'fonts-glyphicons-halflings', 'fonts-lato', 'fonts-mathjax', 'git', 'git-man', 'libblas3:amd64', 'libbrotli1:amd64', 'libc-ares2:amd64', 'libcurl3-gnutls:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'liberror-perl', 'libexpat1:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libicu67:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootstrap', 'libjs-d3', 'libjs-d3-format', 'libjs-inherits', 'libjs-jquery', 'libjs-mathjax', 'libjs-sphinxdoc', 'libjs-sprintf-js', 'libjs-underscore', 'libjs-util', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnode72:amd64', 'libnotify-bin', 'libnotify4:amd64', 'libperl5.32:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libtiff5:amd64', 'libuv1:amd64', 'libwebp6:amd64', 'libxml2:amd64', 'libyaml-0-2:amd64', 'media-types', 'mocha', 'node-ansi-colors', 'node-ansi-regex', 'node-ansi-styles', 'node-anymatch', 'node-argparse', 'node-assert', 'node-async-each', 'node-balanced-match', 'node-binary-extensions', 'node-brace-expansion', 'node-braces', 'node-browser-stdout', 'node-camelcase', 'node-chalk', 'node-chokidar', 'node-cliui', 'node-clone', 'node-color-convert', 'node-color-name', 'node-commander', 'node-d3', 'node-d3-array', 'node-d3-axis', 'node-d3-brush', 'node-d3-chord', 'node-d3-collection', 'node-d3-color', 'node-d3-contour', 'node-d3-dispatch', 'node-d3-drag', 'node-d3-dsv', 'node-d3-ease', 'node-d3-fetch', 'node-d3-force', 'node-d3-format', 'node-d3-geo', 'node-d3-hierarchy', 'node-d3-interpolate', 'node-d3-path', 'node-d3-polygon', 'node-d3-quadtree', 'node-d3-queue', 'node-d3-random', 'node-d3-scale', 'node-d3-scale-chromatic', 'node-d3-selection', 'node-d3-shape', 'node-d3-time', 'node-d3-time-format', 'node-d3-timer', 'node-d3-transition', 'node-d3-voronoi', 'node-d3-zoom', 'node-dagre-d3-renderer', 'node-dagre-layout', 'node-debug', 'node-decamelize', 'node-defaults', 'node-diff', 'node-end-of-stream', 'node-escape-string-regexp', 'node-esprima', 'node-execa', 'node-fill-range', 'node-find-up', 'node-fs.realpath', 'node-get-caller-file', 'node-get-stream', 'node-glob', 'node-glob-parent', 'node-graceful-fs', 'node-graphlibrary', 'node-growl', 'node-has-flag', 'node-he', 'node-iconv-lite', 'node-inflight', 'node-inherits', 'node-invert-kv', 'node-is-binary-path', 'node-is-buffer', 'node-is-extglob', 'node-is-glob', 'node-is-number', 'node-is-plain-obj', 'node-is-stream', 'node-isexe', 'node-js-yaml', 'node-kind-of', 'node-lcid', 'node-locate-path', 'node-lodash', 'node-mem', 'node-merge-stream', 'node-mimic-fn', 'node-minimatch', 'node-ms', 'node-normalize-path', 'node-npm-run-path', 'node-object-assign', 'node-once', 'node-os-locale', 'node-p-limit', 'node-p-locate', 'node-path-dirname', 'node-path-exists', 'node-path-is-absolute', 'node-pump', 'node-randombytes', 'node-readdirp', 'node-repeat-string', 'node-require-directory', 'node-require-main-filename', 'node-rw', 'node-safe-buffer', 'node-serialize-javascript', 'node-set-blocking', 'node-set-immediate-shim', 'node-shebang-command', 'node-shebang-regex', 'node-signal-exit', 'node-sprintf-js', 'node-string-width', 'node-strip-ansi', 'node-strip-json-comments', 'node-supports-color', 'node-to-regex-range', 'node-util', 'node-wcwidth.js', 'node-which', 'node-which-module', 'node-wide-align', 'node-wrap-ansi', 'node-wrappy', 'node-y18n', 'node-yargs', 'node-yargs-parser', 'nodejs', 'openssl', 'perl', 'perl-modules-5.32', 'python3', 'python3-appdirs', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-configargparse', 'python3-datrie:amd64', 'python3-distutils', 'python3-docutils', 'python3-git', 'python3-gitdb', 'python3-idna', 'python3-importlib-metadata', 'python3-ipython-genutils', 'python3-jsonschema', 'python3-jupyter-core', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-nbformat', 'python3-pkg-resources', 'python3-psutil', 'python3-pulp', 'python3-pyparsing', 'python3-pyrsistent:amd64', 'python3-ratelimiter', 'python3-requests', 'python3-roman', 'python3-setuptools', 'python3-six', 'python3-smmap', 'python3-toposort', 'python3-traitlets', 'python3-urllib3', 'python3-wrapt', 'python3-yaml', 'python3-zipp', 'python3.9', 'python3.9-minimal', 'readline-common', 'sgml-base', 'shared-mime-info', 'sphinx-rtd-theme-common', 'xml-core'] 1m1.3s DUMP: (Reading database ... 6693 files and directories currently installed.) Purging configuration files for ca-certificates (20210119) ... Removing dangling symlinks from /etc/ssl/certs... done. dpkg: warning: ignoring request to remove coinor-cbc which isn't installed dpkg: warning: ignoring request to remove coinor-libcbc3 which isn't installed dpkg: warning: ignoring request to remove coinor-libcgl1 which isn't installed dpkg: warning: ignoring request to remove coinor-libclp1 which isn't installed dpkg: warning: ignoring request to remove coinor-libcoinutils3v5 which isn't installed dpkg: warning: ignoring request to remove coinor-libosi1v5 which isn't installed Purging configuration files for docutils-common (0.16+dfsg-4) ... Purging configuration files for fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... dpkg: warning: ignoring request to remove fonts-glyphicons-halflings which isn't installed dpkg: warning: ignoring request to remove fonts-lato which isn't installed dpkg: warning: ignoring request to remove fonts-mathjax which isn't installed Purging configuration files for git (1:2.30.2-1+deb11u2) ... dpkg: warning: ignoring request to remove git-man which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libc-ares2 which isn't installed dpkg: warning: ignoring request to remove libcurl3-gnutls which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove liberror-perl which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libgdbm-compat4 which isn't installed dpkg: warning: ignoring request to remove libgdbm6 which isn't installed Purging configuration files for libgdk-pixbuf-2.0-0:amd64 (2.42.2+dfsg-1+deb11u2) ... dpkg: warning: ignoring request to remove libgdk-pixbuf2.0-common which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.66.8-1+deb11u4) ... dpkg: warning: ignoring request to remove libicu67 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjs-bootstrap which isn't installed dpkg: warning: ignoring request to remove libjs-d3 which isn't installed dpkg: warning: ignoring request to remove libjs-d3-format which isn't installed dpkg: warning: ignoring request to remove libjs-inherits which isn't installed Purging configuration files for libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... dpkg: warning: ignoring request to remove libjs-mathjax which isn't installed dpkg: warning: ignoring request to remove libjs-sphinxdoc which isn't installed dpkg: warning: ignoring request to remove libjs-sprintf-js which isn't installed dpkg: warning: ignoring request to remove libjs-underscore which isn't installed dpkg: warning: ignoring request to remove libjs-util which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libldap-2.4-2 which isn't installed dpkg: warning: ignoring request to remove libmpdec3 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnode72 which isn't installed dpkg: warning: ignoring request to remove libnotify-bin which isn't installed dpkg: warning: ignoring request to remove libnotify4 which isn't installed dpkg: warning: ignoring request to remove libperl5.32 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed Purging configuration files for libpython3.9-minimal:amd64 (3.9.2-1) ... dpkg: warning: ignoring request to remove libpython3.9-stdlib which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libtiff5 which isn't installed dpkg: warning: ignoring request to remove libuv1 which isn't installed dpkg: warning: ignoring request to remove libwebp6 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libyaml-0-2 which isn't installed Purging configuration files for media-types (4.0.0) ... dpkg: warning: ignoring request to remove mocha which isn't installed dpkg: warning: ignoring request to remove node-ansi-colors which isn't installed dpkg: warning: ignoring request to remove node-ansi-regex which isn't installed dpkg: warning: ignoring request to remove node-ansi-styles which isn't installed dpkg: warning: ignoring request to remove node-anymatch which isn't installed dpkg: warning: ignoring request to remove node-argparse which isn't installed dpkg: warning: ignoring request to remove node-assert which isn't installed dpkg: warning: ignoring request to remove node-async-each which isn't installed dpkg: warning: ignoring request to remove node-balanced-match which isn't installed dpkg: warning: ignoring request to remove node-binary-extensions which isn't installed dpkg: warning: ignoring request to remove node-brace-expansion which isn't installed dpkg: warning: ignoring request to remove node-braces which isn't installed dpkg: warning: ignoring request to remove node-browser-stdout which isn't installed dpkg: warning: ignoring request to remove node-camelcase which isn't installed dpkg: warning: ignoring request to remove node-chalk which isn't installed dpkg: warning: ignoring request to remove node-chokidar which isn't installed dpkg: warning: ignoring request to remove node-cliui which isn't installed dpkg: warning: ignoring request to remove node-clone which isn't installed dpkg: warning: ignoring request to remove node-color-convert which isn't installed dpkg: warning: ignoring request to remove node-color-name which isn't installed dpkg: warning: ignoring request to remove node-commander which isn't installed dpkg: warning: ignoring request to remove node-d3 which isn't installed dpkg: warning: ignoring request to remove node-d3-array which isn't installed dpkg: warning: ignoring request to remove node-d3-axis which isn't installed dpkg: warning: ignoring request to remove node-d3-brush which isn't installed dpkg: warning: ignoring request to remove node-d3-chord which isn't installed dpkg: warning: ignoring request to remove node-d3-collection which isn't installed dpkg: warning: ignoring request to remove node-d3-color which isn't installed dpkg: warning: ignoring request to remove node-d3-contour which isn't installed dpkg: warning: ignoring request to remove node-d3-dispatch which isn't installed dpkg: warning: ignoring request to remove node-d3-drag which isn't installed dpkg: warning: ignoring request to remove node-d3-dsv which isn't installed dpkg: warning: ignoring request to remove node-d3-ease which isn't installed dpkg: warning: ignoring request to remove node-d3-fetch which isn't installed dpkg: warning: ignoring request to remove node-d3-force which isn't installed dpkg: warning: ignoring request to remove node-d3-format which isn't installed dpkg: warning: ignoring request to remove node-d3-geo which isn't installed dpkg: warning: ignoring request to remove node-d3-hierarchy which isn't installed dpkg: warning: ignoring request to remove node-d3-interpolate which isn't installed dpkg: warning: ignoring request to remove node-d3-path which isn't installed dpkg: warning: ignoring request to remove node-d3-polygon which isn't installed dpkg: warning: ignoring request to remove node-d3-quadtree which isn't installed dpkg: warning: ignoring request to remove node-d3-queue which isn't installed dpkg: warning: ignoring request to remove node-d3-random which isn't installed dpkg: warning: ignoring request to remove node-d3-scale which isn't installed dpkg: warning: ignoring request to remove node-d3-scale-chromatic which isn't installed dpkg: warning: ignoring request to remove node-d3-selection which isn't installed dpkg: warning: ignoring request to remove node-d3-shape which isn't installed dpkg: warning: ignoring request to remove node-d3-time which isn't installed dpkg: warning: ignoring request to remove node-d3-time-format which isn't installed dpkg: warning: ignoring request to remove node-d3-timer which isn't installed dpkg: warning: ignoring request to remove node-d3-transition which isn't installed dpkg: warning: ignoring request to remove node-d3-voronoi which isn't installed dpkg: warning: ignoring request to remove node-d3-zoom which isn't installed dpkg: warning: ignoring request to remove node-dagre-d3-renderer which isn't installed dpkg: warning: ignoring request to remove node-dagre-layout which isn't installed dpkg: warning: ignoring request to remove node-debug which isn't installed dpkg: warning: ignoring request to remove node-decamelize which isn't installed dpkg: warning: ignoring request to remove node-defaults which isn't installed dpkg: warning: ignoring request to remove node-diff which isn't installed dpkg: warning: ignoring request to remove node-end-of-stream which isn't installed dpkg: warning: ignoring request to remove node-escape-string-regexp which isn't installed dpkg: warning: ignoring request to remove node-esprima which isn't installed dpkg: warning: ignoring request to remove node-execa which isn't installed dpkg: warning: ignoring request to remove node-fill-range which isn't installed dpkg: warning: ignoring request to remove node-find-up which isn't installed dpkg: warning: ignoring request to remove node-fs.realpath which isn't installed dpkg: warning: ignoring request to remove node-get-caller-file which isn't installed dpkg: warning: ignoring request to remove node-get-stream which isn't installed dpkg: warning: ignoring request to remove node-glob which isn't installed dpkg: warning: ignoring request to remove node-glob-parent which isn't installed dpkg: warning: ignoring request to remove node-graceful-fs which isn't installed dpkg: warning: ignoring request to remove node-graphlibrary which isn't installed dpkg: warning: ignoring request to remove node-growl which isn't installed dpkg: warning: ignoring request to remove node-has-flag which isn't installed dpkg: warning: ignoring request to remove node-he which isn't installed dpkg: warning: ignoring request to remove node-iconv-lite which isn't installed dpkg: warning: ignoring request to remove node-inflight which isn't installed dpkg: warning: ignoring request to remove node-inherits which isn't installed dpkg: warning: ignoring request to remove node-invert-kv which isn't installed dpkg: warning: ignoring request to remove node-is-binary-path which isn't installed dpkg: warning: ignoring request to remove node-is-buffer which isn't installed dpkg: warning: ignoring request to remove node-is-extglob which isn't installed dpkg: warning: ignoring request to remove node-is-glob which isn't installed dpkg: warning: ignoring request to remove node-is-number which isn't installed dpkg: warning: ignoring request to remove node-is-plain-obj which isn't installed dpkg: warning: ignoring request to remove node-is-stream which isn't installed dpkg: warning: ignoring request to remove node-isexe which isn't installed dpkg: warning: ignoring request to remove node-js-yaml which isn't installed dpkg: warning: ignoring request to remove node-kind-of which isn't installed dpkg: warning: ignoring request to remove node-lcid which isn't installed dpkg: warning: ignoring request to remove node-locate-path which isn't installed dpkg: warning: ignoring request to remove node-lodash which isn't installed dpkg: warning: ignoring request to remove node-mem which isn't installed dpkg: warning: ignoring request to remove node-merge-stream which isn't installed dpkg: warning: ignoring request to remove node-mimic-fn which isn't installed dpkg: warning: ignoring request to remove node-minimatch which isn't installed dpkg: warning: ignoring request to remove node-ms which isn't installed dpkg: warning: ignoring request to remove node-normalize-path which isn't installed dpkg: warning: ignoring request to remove node-npm-run-path which isn't installed dpkg: warning: ignoring request to remove node-object-assign which isn't installed dpkg: warning: ignoring request to remove node-once which isn't installed dpkg: warning: ignoring request to remove node-os-locale which isn't installed dpkg: warning: ignoring request to remove node-p-limit which isn't installed dpkg: warning: ignoring request to remove node-p-locate which isn't installed dpkg: warning: ignoring request to remove node-path-dirname which isn't installed dpkg: warning: ignoring request to remove node-path-exists which isn't installed dpkg: warning: ignoring request to remove node-path-is-absolute which isn't installed dpkg: warning: ignoring request to remove node-pump which isn't installed dpkg: warning: ignoring request to remove node-randombytes which isn't installed dpkg: warning: ignoring request to remove node-readdirp which isn't installed dpkg: warning: ignoring request to remove node-repeat-string which isn't installed dpkg: warning: ignoring request to remove node-require-directory which isn't installed dpkg: warning: ignoring request to remove node-require-main-filename which isn't installed dpkg: warning: ignoring request to remove node-rw which isn't installed dpkg: warning: ignoring request to remove node-safe-buffer which isn't installed dpkg: warning: ignoring request to remove node-serialize-javascript which isn't installed dpkg: warning: ignoring request to remove node-set-blocking which isn't installed dpkg: warning: ignoring request to remove node-set-immediate-shim which isn't installed dpkg: warning: ignoring request to remove node-shebang-command which isn't installed dpkg: warning: ignoring request to remove node-shebang-regex which isn't installed dpkg: warning: ignoring request to remove node-signal-exit which isn't installed Purging configuration files for node-sprintf-js (1.1.2+ds1-2) ... dpkg: warning: ignoring request to remove node-string-width which isn't installed dpkg: warning: ignoring request to remove node-strip-ansi which isn't installed dpkg: warning: ignoring request to remove node-strip-json-comments which isn't installed dpkg: warning: ignoring request to remove node-supports-color which isn't installed dpkg: warning: ignoring request to remove node-to-regex-range which isn't installed dpkg: warning: ignoring request to remove node-util which isn't installed dpkg: warning: ignoring request to remove node-wcwidth.js which isn't installed dpkg: warning: ignoring request to remove node-which which isn't installed dpkg: warning: ignoring request to remove node-which-module which isn't installed dpkg: warning: ignoring request to remove node-wide-align which isn't installed dpkg: warning: ignoring request to remove node-wrap-ansi which isn't installed dpkg: warning: ignoring request to remove node-wrappy which isn't installed dpkg: warning: ignoring request to remove node-y18n which isn't installed dpkg: warning: ignoring request to remove node-yargs which isn't installed dpkg: warning: ignoring request to remove node-yargs-parser which isn't installed dpkg: warning: ignoring request to remove nodejs which isn't installed Purging configuration files for openssl (1.1.1w-0+deb11u1) ... Purging configuration files for perl (5.32.1-4+deb11u3) ... dpkg: warning: ignoring request to remove perl-modules-5.32 which isn't installed Purging configuration files for python3 (3.9.2-3) ... dpkg: warning: ignoring request to remove python3-appdirs which isn't installed dpkg: warning: ignoring request to remove python3-attr which isn't installed dpkg: warning: ignoring request to remove python3-certifi which isn't installed dpkg: warning: ignoring request to remove python3-chardet which isn't installed dpkg: warning: ignoring request to remove python3-configargparse which isn't installed dpkg: warning: ignoring request to remove python3-datrie which isn't installed dpkg: warning: ignoring request to remove python3-distutils which isn't installed dpkg: warning: ignoring request to remove python3-docutils which isn't installed dpkg: warning: ignoring request to remove python3-git which isn't installed dpkg: warning: ignoring request to remove python3-gitdb which isn't installed dpkg: warning: ignoring request to remove python3-idna which isn't installed dpkg: warning: ignoring request to remove python3-importlib-metadata which isn't installed dpkg: warning: ignoring request to remove python3-ipython-genutils which isn't installed Purging configuration files for python3-jsonschema (3.2.0-3) ... dpkg: warning: ignoring request to remove python3-jupyter-core which isn't installed dpkg: warning: ignoring request to remove python3-lib2to3 which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-more-itertools which isn't installed dpkg: warning: ignoring request to remove python3-nbformat which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-psutil which isn't installed Purging configuration files for python3-pulp (1.6.0+dfsg1-5) ... dpkg: warning: ignoring request to remove python3-pyparsing which isn't installed dpkg: warning: ignoring request to remove python3-pyrsistent which isn't installed dpkg: warning: ignoring request to remove python3-ratelimiter which isn't installed dpkg: warning: ignoring request to remove python3-requests which isn't installed dpkg: warning: ignoring request to remove python3-roman which isn't installed dpkg: warning: ignoring request to remove python3-setuptools which isn't installed dpkg: warning: ignoring request to remove python3-six which isn't installed dpkg: warning: ignoring request to remove python3-smmap which isn't installed dpkg: warning: ignoring request to remove python3-toposort which isn't installed dpkg: warning: ignoring request to remove python3-traitlets which isn't installed dpkg: warning: ignoring request to remove python3-urllib3 which isn't installed dpkg: warning: ignoring request to remove python3-wrapt which isn't installed dpkg: warning: ignoring request to remove python3-yaml which isn't installed dpkg: warning: ignoring request to remove python3-zipp which isn't installed dpkg: warning: ignoring request to remove python3.9 which isn't installed Purging configuration files for python3.9-minimal (3.9.2-1) ... Purging configuration files for readline-common (8.1-1) ... Purging configuration files for sgml-base (1.30) ... Purging configuration files for shared-mime-info (2.0-1) ... dpkg: warning: ignoring request to remove sphinx-rtd-theme-common which isn't installed Purging configuration files for xml-core (0.18+nmu1) ... 1m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg', '--purge', 'ca-certificates', 'coinor-cbc', 'coinor-libcbc3:amd64', 'coinor-libcgl1', 'coinor-libclp1', 'coinor-libcoinutils3v5', 'coinor-libosi1v5:amd64', 'docutils-common', 'fonts-font-awesome', 'fonts-glyphicons-halflings', 'fonts-lato', 'fonts-mathjax', 'git', 'git-man', 'libblas3:amd64', 'libbrotli1:amd64', 'libc-ares2:amd64', 'libcurl3-gnutls:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'liberror-perl', 'libexpat1:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libicu67:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootstrap', 'libjs-d3', 'libjs-d3-format', 'libjs-inherits', 'libjs-jquery', 'libjs-mathjax', 'libjs-sphinxdoc', 'libjs-sprintf-js', 'libjs-underscore', 'libjs-util', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnode72:amd64', 'libnotify-bin', 'libnotify4:amd64', 'libperl5.32:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libtiff5:amd64', 'libuv1:amd64', 'libwebp6:amd64', 'libxml2:amd64', 'libyaml-0-2:amd64', 'media-types', 'mocha', 'node-ansi-colors', 'node-ansi-regex', 'node-ansi-styles', 'node-anymatch', 'node-argparse', 'node-assert', 'node-async-each', 'node-balanced-match', 'node-binary-extensions', 'node-brace-expansion', 'node-braces', 'node-browser-stdout', 'node-camelcase', 'node-chalk', 'node-chokidar', 'node-cliui', 'node-clone', 'node-color-convert', 'node-color-name', 'node-commander', 'node-d3', 'node-d3-array', 'node-d3-axis', 'node-d3-brush', 'node-d3-chord', 'node-d3-collection', 'node-d3-color', 'node-d3-contour', 'node-d3-dispatch', 'node-d3-drag', 'node-d3-dsv', 'node-d3-ease', 'node-d3-fetch', 'node-d3-force', 'node-d3-format', 'node-d3-geo', 'node-d3-hierarchy', 'node-d3-interpolate', 'node-d3-path', 'node-d3-polygon', 'node-d3-quadtree', 'node-d3-queue', 'node-d3-random', 'node-d3-scale', 'node-d3-scale-chromatic', 'node-d3-selection', 'node-d3-shape', 'node-d3-time', 'node-d3-time-format', 'node-d3-timer', 'node-d3-transition', 'node-d3-voronoi', 'node-d3-zoom', 'node-dagre-d3-renderer', 'node-dagre-layout', 'node-debug', 'node-decamelize', 'node-defaults', 'node-diff', 'node-end-of-stream', 'node-escape-string-regexp', 'node-esprima', 'node-execa', 'node-fill-range', 'node-find-up', 'node-fs.realpath', 'node-get-caller-file', 'node-get-stream', 'node-glob', 'node-glob-parent', 'node-graceful-fs', 'node-graphlibrary', 'node-growl', 'node-has-flag', 'node-he', 'node-iconv-lite', 'node-inflight', 'node-inherits', 'node-invert-kv', 'node-is-binary-path', 'node-is-buffer', 'node-is-extglob', 'node-is-glob', 'node-is-number', 'node-is-plain-obj', 'node-is-stream', 'node-isexe', 'node-js-yaml', 'node-kind-of', 'node-lcid', 'node-locate-path', 'node-lodash', 'node-mem', 'node-merge-stream', 'node-mimic-fn', 'node-minimatch', 'node-ms', 'node-normalize-path', 'node-npm-run-path', 'node-object-assign', 'node-once', 'node-os-locale', 'node-p-limit', 'node-p-locate', 'node-path-dirname', 'node-path-exists', 'node-path-is-absolute', 'node-pump', 'node-randombytes', 'node-readdirp', 'node-repeat-string', 'node-require-directory', 'node-require-main-filename', 'node-rw', 'node-safe-buffer', 'node-serialize-javascript', 'node-set-blocking', 'node-set-immediate-shim', 'node-shebang-command', 'node-shebang-regex', 'node-signal-exit', 'node-sprintf-js', 'node-string-width', 'node-strip-ansi', 'node-strip-json-comments', 'node-supports-color', 'node-to-regex-range', 'node-util', 'node-wcwidth.js', 'node-which', 'node-which-module', 'node-wide-align', 'node-wrap-ansi', 'node-wrappy', 'node-y18n', 'node-yargs', 'node-yargs-parser', 'nodejs', 'openssl', 'perl', 'perl-modules-5.32', 'python3', 'python3-appdirs', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-configargparse', 'python3-datrie:amd64', 'python3-distutils', 'python3-docutils', 'python3-git', 'python3-gitdb', 'python3-idna', 'python3-importlib-metadata', 'python3-ipython-genutils', 'python3-jsonschema', 'python3-jupyter-core', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-nbformat', 'python3-pkg-resources', 'python3-psutil', 'python3-pulp', 'python3-pyparsing', 'python3-pyrsistent:amd64', 'python3-ratelimiter', 'python3-requests', 'python3-roman', 'python3-setuptools', 'python3-six', 'python3-smmap', 'python3-toposort', 'python3-traitlets', 'python3-urllib3', 'python3-wrapt', 'python3-yaml', 'python3-zipp', 'python3.9', 'python3.9-minimal', 'readline-common', 'sgml-base', 'shared-mime-info', 'sphinx-rtd-theme-common', 'xml-core'] 1m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg', '--purge', 'snakemake'] 1m1.3s DUMP: dpkg: warning: ignoring request to remove snakemake which isn't installed 1m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg', '--purge', 'snakemake'] 1m1.3s INFO: Running scripts post_purge 1m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_purge_exceptions'] 1m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_purge_exceptions'] 1m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg', '--purge', '--pending'] 1m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg', '--purge', '--pending'] 1m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg', '--remove', '--pending'] 1m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg', '--remove', '--pending'] 1m1.3s INFO: Running scripts post_test 1m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_test_exceptions'] 1m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'tmp/scripts/post_test_exceptions'] 1m1.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 1m1.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 1m2.7s DEBUG: No broken symlinks as far as we can find. 1m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg-divert', '--list'] 1m2.7s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'dpkg-divert', '--list'] 1m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', 'clean'] 1m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl', 'apt-get', 'clean'] 1m2.8s DEBUG: Recording chroot state 1m3.5s INFO: PASS: Installation and purging test. 1m4.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/shm'] 1m4.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/shm'] 1m4.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/console'] 1m4.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/console'] 1m4.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/ptmx'] 1m4.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/ptmx'] 1m4.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/pts'] 1m4.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/dev/pts'] 1m4.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/proc'] 1m4.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl/proc'] 1m4.1s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 1m4.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpf6gv4jtl'] 1m4.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpf6gv4jtl 1m4.3s INFO: PASS: All tests. 1m4.3s INFO: piuparts run ends. ret=0 End: 2024-08-11 07:34:05 GMT