Start: 2024-10-09 17:11:55 GMT [bullseye] Package: r-cran-metamix Source: r-cran-metamix (0.3-2) Version: 0.3-2+b1 Installed-Size: 1759 Maintainer: Debian R Packages Maintainers Architecture: amd64 Depends: r-base-core (>= 4.0.0-3), r-api-4.0, r-cran-data.table (>= 1.9.2), r-cran-matrix, r-cran-gtools, r-cran-rmpi, r-cran-ggplot2, libc6 (>= 2.2.5), libstdc++6 (>= 4.9), libopenmpi-dev Suggests: r-cran-knitr Description: GNU R bayesian mixture analysis for metagenomic community profiling Homepage: https://cran.r-project.org/package=metaMix Description-md5: 9f51ca1b979fb77ee86077f0f70ab8bf Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-metamix/r-cran-metamix_0.3-2+b1_amd64.deb Size: 743660 MD5sum: be9348bd8eac209c3b8021036c690bb6 SHA256: 30cbccdaccca9c612c31efbce8b9342cc1ca4850c31e82ddb1b435f9cb82c273 [bullseye-next] Package: r-cran-metamix Source: r-cran-metamix (0.3-2) Version: 0.3-2+b1 Installed-Size: 1759 Maintainer: Debian R Packages Maintainers Architecture: amd64 Depends: r-base-core (>= 4.0.0-3), r-api-4.0, r-cran-data.table (>= 1.9.2), r-cran-matrix, r-cran-gtools, r-cran-rmpi, r-cran-ggplot2, libc6 (>= 2.2.5), libstdc++6 (>= 4.9), libopenmpi-dev Suggests: r-cran-knitr Description: GNU R bayesian mixture analysis for metagenomic community profiling Homepage: https://cran.r-project.org/package=metaMix Description-md5: 9f51ca1b979fb77ee86077f0f70ab8bf Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-metamix/r-cran-metamix_0.3-2+b1_amd64.deb Size: 743660 MD5sum: be9348bd8eac209c3b8021036c690bb6 SHA256: 30cbccdaccca9c612c31efbce8b9342cc1ca4850c31e82ddb1b435f9cb82c273 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d bullseye -d bullseye-next -B /srv/piuparts.debian.org/slave/refchroot/bullseye2next/reference-chroot-metadata.dat --apt r-cran-metamix=0.3-2+b1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d bullseye -d bullseye-next -B /srv/piuparts.debian.org/slave/refchroot/bullseye2next/reference-chroot-metadata.dat --apt r-cran-metamix=0.3-2+b1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpws40x3j9 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpws40x3j9 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/proc'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/proc'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/pts'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/pts'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/ptmx'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/ptmx'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/console'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/console'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/shm'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/shm'] 0m0.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m0.2s DEBUG: Created policy-rc.d and chmodded it. 0m0.2s DEBUG: Created resolv.conf. 0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpws40x3j9/tmp/scripts/ 0m0.2s INFO: Running scripts post_chroot_unpack 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', 'update'] 0m0.6s DUMP: Hit:1 http://deb.debian.org/debian bullseye InRelease Reading package lists... 0m0.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', 'update'] 0m0.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-yf', 'dist-upgrade'] 0m0.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m0.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-yf', 'dist-upgrade'] 0m0.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m1.0s DUMP: f58ca9ba0b3223edf5b7797c101a5448 - 0m1.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m1.0s INFO: Running scripts post_setup 0m1.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_dummy_users'] 0m1.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_dummy_users'] 0m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_forbid_home'] 0m1.5s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m1.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_forbid_home'] 0m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_force-unsafe-io'] 0m1.6s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_force-unsafe-io'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_minimize'] 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_minimize'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_squeeze-backports'] 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_squeeze-backports'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_zz_backports'] 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_setup_zz_backports'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m1.6s DUMP: install ok installed adduser adduser 3.118+deb11u1 install ok installed apt apt 2.2.4 install ok installed base-files base-files 11.1+deb11u11 install ok installed base-passwd base-passwd 3.5.51 install ok installed bash bash 5.1-2+deb11u1 install ok installed bsdutils bsdutils 1:2.36.1-8+deb11u2 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-5 install ok installed debconf debconf 1.5.77 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1+deb11u1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-5 install ok installed dpkg dpkg 1.20.13 install ok installed e2fsprogs e2fsprogs 1.46.2-2 install ok installed findutils findutils 4.8.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-22 install ok installed gpgv gpgv 2.2.27-2+deb11u2 install ok installed grep grep 3.6-1+deb11u1 install ok installed gzip gzip 1.10-4+deb11u1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.60 install ok installed libacl1:amd64 libacl1 2.2.53-10 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.2.4 install ok installed libattr1:amd64 libattr1 1:2.4.48-6 install ok installed libaudit-common libaudit-common 1:3.0-2 install ok installed libaudit1:amd64 libaudit1 1:3.0-2 install ok installed libblkid1:amd64 libblkid1 2.36.1-8+deb11u2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-13+deb11u11 install ok installed libc6:amd64 libc6 2.31-13+deb11u11 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcom-err2:amd64 libcom-err2 1.46.2-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.18-4 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.8 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.260 install ok installed libext2fs2:amd64 libext2fs2 1.46.2-2 install ok installed libffi7:amd64 libffi7 3.3-6 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.1-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-6 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1+deb11u1 install ok installed libgnutls30:amd64 libgnutls30 3.7.1-5+deb11u5 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-6+deb11u5 install ok installed libhogweed6:amd64 libhogweed6 3.7.3-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-5 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-6+deb11u5 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-6+deb11u5 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-6+deb11u5 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1~deb11u1 install ok installed libmount1:amd64 libmount1 2.36.1-8+deb11u2 install ok installed libnettle8:amd64 libnettle8 3.7.3-1 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.22-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-9+deb11u1 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-9+deb11u1 install ok installed libpam-runtime libpam-runtime 1.4.0-9+deb11u1 install ok installed libpam0g:amd64 libpam0g 1.4.0-9+deb11u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.36-2+deb11u1 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.5.1-1+deb11u1 install ok installed libselinux1:amd64 libselinux1 3.1-3 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b2 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-8+deb11u2 install ok installed libss2:amd64 libss2 1.46.2-2 install ok installed libssl1.1:amd64 libssl1.1 1.1.1w-0+deb11u1 install ok installed libstdc++6:amd64 libstdc++6 10.2.1-6 install ok installed libsystemd0:amd64 libsystemd0 247.3-7+deb11u5 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2+deb11u1 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-2+deb11u2 install ok installed libtirpc-common libtirpc-common 1.3.1-1+deb11u1 install ok installed libtirpc3:amd64 libtirpc3 1.3.1-1+deb11u1 install ok installed libudev1:amd64 libudev1 247.3-7+deb11u5 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-8+deb11u2 install ok installed libxxhash0:amd64 libxxhash0 0.8.0-2 install ok installed libzstd1:amd64 libzstd1 1.4.8+dfsg-2.1 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.46.2-2 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36.1-8+deb11u2 install ok installed ncurses-base ncurses-base 6.2+20201114-2+deb11u2 install ok installed ncurses-bin ncurses-bin 6.2+20201114-2+deb11u2 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.32.1-4+deb11u3 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-7+deb11u1 install ok installed tar tar 1.34+dfsg-1+deb11u1 install ok installed tzdata tzdata 2024a-0+deb11u1 install ok installed util-linux util-linux 2.36.1-8+deb11u2 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2+deb11u2 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m1.6s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/bullseye2next/reference-chroot-metadata.dat 0m1.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m1.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m1.8s INFO: Running scripts is_testable 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/is_testable_uninstallable'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/is_testable_uninstallable'] 0m1.8s INFO: Running scripts pre_test 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_test_exceptions'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_test_exceptions'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_test_root_password'] 0m1.9s DUMP: New password: Retype new password: passwd: password updated successfully 0m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_test_root_password'] 0m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'show', '--no-all-versions', 'r-cran-metamix'] 0m2.0s DUMP: Package: r-cran-metamix Source: r-cran-metamix (0.3-2) Version: 0.3-2+b1 Installed-Size: 1759 Maintainer: Debian R Packages Maintainers Architecture: amd64 Depends: r-base-core (>= 4.0.0-3), r-api-4.0, r-cran-data.table (>= 1.9.2), r-cran-matrix, r-cran-gtools, r-cran-rmpi, r-cran-ggplot2, libc6 (>= 2.2.5), libstdc++6 (>= 4.9), libopenmpi-dev Suggests: r-cran-knitr Description-en: GNU R bayesian mixture analysis for metagenomic community profiling Resolves complex metagenomic mixtures by analysing deep sequencing data, using a mixture model based approach. The use of parallel Monte Carlo Markov chains for the exploration of the species space enables the identification of the set of species more likely to contribute to the mixture. Description-md5: 9f51ca1b979fb77ee86077f0f70ab8bf Homepage: https://cran.r-project.org/package=metaMix Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-metamix/r-cran-metamix_0.3-2+b1_amd64.deb Size: 743660 MD5sum: be9348bd8eac209c3b8021036c690bb6 SHA256: 30cbccdaccca9c612c31efbce8b9342cc1ca4850c31e82ddb1b435f9cb82c273 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'show', '--no-all-versions', 'r-cran-metamix'] 0m2.0s INFO: apt-cache knows about the following packages: r-cran-metamix 0m2.0s INFO: Running scripts pre_install 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_database-server'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_database-server'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_exceptions'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_exceptions'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_extras'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_extras'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy'] 0m2.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release v=11.11,o=Debian,a=oldstable,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy', 'r-cran-metamix'] 0m2.0s DUMP: r-cran-metamix: Installed: (none) Candidate: 0.3-2+b1 Version table: 0.3-2+b1 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy', 'r-cran-metamix'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-y', 'install', 'r-cran-metamix'] 0m25.0s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: autoconf automake autotools-dev binutils binutils-common binutils-x86-64-linux-gnu ca-certificates cpp-10 fontconfig fontconfig-config fonts-dejavu-core gcc-10 gfortran-10 ibverbs-providers libasan6 libatomic1 libbinutils libblas3 libbrotli1 libbsd0 libc-dev-bin libc6-dev libcairo2 libcbor0 libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libcurl4 libdatrie1 libdeflate0 libedit2 libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libexpat1 libfabric1 libfido2-1 libfontconfig1 libfreetype6 libfribidi0 libgcc-10-dev libgdbm-compat4 libgdbm6 libgfortran-10-dev libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0b libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libice6 libicu67 libisl23 libitm1 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui liblapack3 libldap-2.4-2 liblsan0 libltdl-dev libltdl7 libmd0 libmpc3 libmpfr6 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnsl-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpciaccess0 libperl5.32 libpixman-1-0 libpmix-dev libpmix2 libpng16-16 libpsl5 libpsm-infinipath1 libpsm2-2 libquadmath0 librdmacm1 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh2-1 libtcl8.6 libthai-data libthai0 libtiff5 libtirpc-dev libtk8.6 libtsan0 libubsan1 libucx0 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxnvctrl0 libxrender1 libxss1 libxt6 linux-libc-dev m4 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssl perl perl-modules-5.32 r-base-core r-cran-assertthat r-cran-brio r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-data.table r-cran-desc r-cran-diffobj r-cran-digest r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-gtools r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgload r-cran-praise r-cran-prettyunits r-cran-processx r-cran-ps r-cran-r6 r-cran-rcolorbrewer r-cran-rematch2 r-cran-rlang r-cran-rmpi r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-waldo r-cran-withr readline-common sensible-utils ucf unzip x11-common xdg-utils zip zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc libtool gettext binutils-doc gcc-10-locales gcc-10-multilib gcc-10-doc gfortran-10-multilib gfortran-10-doc libcoarrays-dev glibc-doc manpages-dev gdbm-l10n libhwloc-contrib-plugins libjs-jquery-ui-docs libtool-doc openmpi-doc pciutils tcl8.6 tk8.6 m4-doc opencl-icd gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make libtap-harness-archive-perl elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-covr r-cran-htmlwidgets r-cran-knitr r-cran-rmarkdown r-cran-prettycode r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs r-cran-dplyr r-cran-png r-cran-jpeg r-cran-viridis r-cran-bit64 r-cran-bit r-cran-curl r-cran-r.utils r-cran-xts r-cran-zoo r-cran-yaml r-cran-unitizer r-cran-hmisc r-cran-maps r-cran-maptools r-cran-multcomp r-cran-rpart r-cran-sf r-cran-svglite r-cran-dbi r-cran-rsqlite r-cran-forcats r-cran-stringr r-cran-magick r-cran-httr r-cran-plyr r-cran-rcpp r-cran-cpp11 r-cran-bitops r-cran-rsprng r-cran-dichromat r-cran-mockery r-cran-usethis r-cran-bench r-cran-blob r-cran-formattable r-cran-hms r-cran-htmltools r-cran-purrr r-cran-tidyr r-cran-zeallot readline-doc Recommended packages: manpages manpages-dev libc-devtools libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libldap-common libtool libcoarrays-openmpi-dev publicsuffix libsasl2-modules xauth netbase r-recommended r-base-dev r-doc-html r-cran-cliapp r-cran-mockery r-cran-sp r-cran-mapproj r-cran-hexbin r-cran-vdiffr r-cran-quantreg r-cran-xml2 r-cran-lubridate r-cran-codetools r-cran-curl r-cran-rmarkdown r-cran-mockr r-cran-bit64 r-cran-hms r-cran-rsqlite r-cran-knitr r-cran-dplyr r-cran-generics r-cran-dbi libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autotools-dev binutils binutils-common binutils-x86-64-linux-gnu ca-certificates cpp-10 fontconfig fontconfig-config fonts-dejavu-core gcc-10 gfortran-10 ibverbs-providers libasan6 libatomic1 libbinutils libblas3 libbrotli1 libbsd0 libc-dev-bin libc6-dev libcairo2 libcbor0 libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libcurl4 libdatrie1 libdeflate0 libedit2 libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libexpat1 libfabric1 libfido2-1 libfontconfig1 libfreetype6 libfribidi0 libgcc-10-dev libgdbm-compat4 libgdbm6 libgfortran-10-dev libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0b libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libice6 libicu67 libisl23 libitm1 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui liblapack3 libldap-2.4-2 liblsan0 libltdl-dev libltdl7 libmd0 libmpc3 libmpfr6 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnsl-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpciaccess0 libperl5.32 libpixman-1-0 libpmix-dev libpmix2 libpng16-16 libpsl5 libpsm-infinipath1 libpsm2-2 libquadmath0 librdmacm1 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh2-1 libtcl8.6 libthai-data libthai0 libtiff5 libtirpc-dev libtk8.6 libtsan0 libubsan1 libucx0 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxnvctrl0 libxrender1 libxss1 libxt6 linux-libc-dev m4 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssl perl perl-modules-5.32 r-base-core r-cran-assertthat r-cran-brio r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-data.table r-cran-desc r-cran-diffobj r-cran-digest r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-gtools r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-magrittr r-cran-mass r-cran-matrix r-cran-metamix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgload r-cran-praise r-cran-prettyunits r-cran-processx r-cran-ps r-cran-r6 r-cran-rcolorbrewer r-cran-rematch2 r-cran-rlang r-cran-rmpi r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-waldo r-cran-withr readline-common sensible-utils ucf unzip x11-common xdg-utils zip zlib1g-dev 0 upgraded, 203 newly installed, 0 to remove and 0 not upgraded. Need to get 164 MB of archives. After this operation, 494 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 perl-modules-5.32 all 5.32.1-4+deb11u3 [2823 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 libgdbm6 amd64 1.19-2 [64.9 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 libgdbm-compat4 amd64 1.19-2 [44.7 kB] Get:4 http://deb.debian.org/debian bullseye/main amd64 libperl5.32 amd64 5.32.1-4+deb11u3 [4121 kB] Get:5 http://deb.debian.org/debian bullseye/main amd64 perl amd64 5.32.1-4+deb11u3 [293 kB] Get:6 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get:7 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get:8 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get:9 http://deb.debian.org/debian bullseye/main amd64 openssl amd64 1.1.1w-0+deb11u1 [859 kB] Get:10 http://deb.debian.org/debian bullseye/main amd64 ca-certificates all 20210119 [158 kB] Get:11 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get:12 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1+deb11u1 [108 kB] Get:13 http://deb.debian.org/debian bullseye/main amd64 libedit2 amd64 3.1-20191231-2+b1 [96.7 kB] Get:14 http://deb.debian.org/debian bullseye/main amd64 libcbor0 amd64 0.5.0+dfsg-2 [24.0 kB] Get:15 http://deb.debian.org/debian bullseye/main amd64 libfido2-1 amd64 1.6.0-2 [53.3 kB] Get:16 http://deb.debian.org/debian bullseye/main amd64 openssh-client amd64 1:8.4p1-5+deb11u3 [932 kB] Get:17 http://deb.debian.org/debian bullseye/main amd64 ucf all 3.0043 [74.0 kB] Get:18 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:19 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:20 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get:21 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:22 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get:23 http://deb.debian.org/debian bullseye/main amd64 binutils-common amd64 2.35.2-2 [2220 kB] Get:24 http://deb.debian.org/debian bullseye/main amd64 libbinutils amd64 2.35.2-2 [570 kB] Get:25 http://deb.debian.org/debian bullseye/main amd64 libctf-nobfd0 amd64 2.35.2-2 [110 kB] Get:26 http://deb.debian.org/debian bullseye/main amd64 libctf0 amd64 2.35.2-2 [53.2 kB] Get:27 http://deb.debian.org/debian bullseye/main amd64 binutils-x86-64-linux-gnu amd64 2.35.2-2 [1809 kB] Get:28 http://deb.debian.org/debian bullseye/main amd64 binutils amd64 2.35.2-2 [61.2 kB] Get:29 http://deb.debian.org/debian bullseye/main amd64 libisl23 amd64 0.23-1 [676 kB] Get:30 http://deb.debian.org/debian bullseye/main amd64 libmpfr6 amd64 4.1.0-3 [2012 kB] Get:31 http://deb.debian.org/debian bullseye/main amd64 libmpc3 amd64 1.2.0-1 [45.0 kB] Get:32 http://deb.debian.org/debian bullseye/main amd64 cpp-10 amd64 10.2.1-6 [8528 kB] Get:33 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2+deb11u5 [98.2 kB] Get:34 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get:35 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get:36 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.4+dfsg-1+deb11u1 [418 kB] Get:37 http://deb.debian.org/debian bullseye/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:38 http://deb.debian.org/debian bullseye/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get:39 http://deb.debian.org/debian bullseye/main amd64 libfontconfig1 amd64 2.13.1-4.2 [347 kB] Get:40 http://deb.debian.org/debian bullseye/main amd64 fontconfig amd64 2.13.1-4.2 [417 kB] Get:41 http://deb.debian.org/debian bullseye/main amd64 libcc1-0 amd64 10.2.1-6 [47.0 kB] Get:42 http://deb.debian.org/debian bullseye/main amd64 libgomp1 amd64 10.2.1-6 [99.9 kB] Get:43 http://deb.debian.org/debian bullseye/main amd64 libitm1 amd64 10.2.1-6 [25.8 kB] Get:44 http://deb.debian.org/debian bullseye/main amd64 libatomic1 amd64 10.2.1-6 [9008 B] Get:45 http://deb.debian.org/debian bullseye/main amd64 libasan6 amd64 10.2.1-6 [2065 kB] Get:46 http://deb.debian.org/debian bullseye/main amd64 liblsan0 amd64 10.2.1-6 [828 kB] Get:47 http://deb.debian.org/debian bullseye/main amd64 libtsan0 amd64 10.2.1-6 [2000 kB] Get:48 http://deb.debian.org/debian bullseye/main amd64 libubsan1 amd64 10.2.1-6 [777 kB] Get:49 http://deb.debian.org/debian bullseye/main amd64 libquadmath0 amd64 10.2.1-6 [145 kB] Get:50 http://deb.debian.org/debian bullseye/main amd64 libgcc-10-dev amd64 10.2.1-6 [2328 kB] Get:51 http://deb.debian.org/debian bullseye/main amd64 gcc-10 amd64 10.2.1-6 [17.0 MB] Get:52 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.1-6 [727 kB] Get:53 http://deb.debian.org/debian bullseye/main amd64 libgfortran-10-dev amd64 10.2.1-6 [769 kB] Get:54 http://deb.debian.org/debian bullseye/main amd64 libc-dev-bin amd64 2.31-13+deb11u11 [276 kB] Get:55 http://deb.debian.org/debian bullseye/main amd64 linux-libc-dev amd64 5.10.223-1 [1756 kB] Get:56 http://deb.debian.org/debian bullseye/main amd64 libcrypt-dev amd64 1:4.4.18-4 [104 kB] Get:57 http://deb.debian.org/debian bullseye/main amd64 libtirpc-dev amd64 1.3.1-1+deb11u1 [191 kB] Get:58 http://deb.debian.org/debian bullseye/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:59 http://deb.debian.org/debian bullseye/main amd64 libc6-dev amd64 2.31-13+deb11u11 [2361 kB] Get:60 http://deb.debian.org/debian bullseye/main amd64 gfortran-10 amd64 10.2.1-6 [9447 kB] Get:61 http://deb.debian.org/debian bullseye/main amd64 libnl-3-200 amd64 3.4.0-1+b1 [63.6 kB] Get:62 http://deb.debian.org/debian bullseye/main amd64 libnl-route-3-200 amd64 3.4.0-1+b1 [161 kB] Get:63 http://deb.debian.org/debian bullseye/main amd64 libibverbs1 amd64 33.2-1 [59.4 kB] Get:64 http://deb.debian.org/debian bullseye/main amd64 ibverbs-providers amd64 33.2-1 [253 kB] Get:65 http://deb.debian.org/debian bullseye/main amd64 libblas3 amd64 3.9.0-3+deb11u1 [153 kB] Get:66 http://deb.debian.org/debian bullseye/main amd64 libpixman-1-0 amd64 0.40.0-1.1~deb11u1 [543 kB] Get:67 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:68 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:69 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get:70 http://deb.debian.org/debian bullseye/main amd64 libx11-data all 2:1.7.2-1+deb11u2 [311 kB] Get:71 http://deb.debian.org/debian bullseye/main amd64 libx11-6 amd64 2:1.7.2-1+deb11u2 [772 kB] Get:72 http://deb.debian.org/debian bullseye/main amd64 libxcb-render0 amd64 1.14-3 [111 kB] Get:73 http://deb.debian.org/debian bullseye/main amd64 libxcb-shm0 amd64 1.14-3 [101 kB] Get:74 http://deb.debian.org/debian bullseye/main amd64 libxext6 amd64 2:1.3.3-1.1 [52.7 kB] Get:75 http://deb.debian.org/debian bullseye/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:76 http://deb.debian.org/debian bullseye/main amd64 libcairo2 amd64 1.16.0-5 [694 kB] Get:77 http://deb.debian.org/debian bullseye/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1+deb11u1 [69.1 kB] Get:78 http://deb.debian.org/debian bullseye/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1+deb11u1 [106 kB] Get:79 http://deb.debian.org/debian bullseye/main amd64 libldap-2.4-2 amd64 2.4.57+dfsg-3+deb11u1 [232 kB] Get:80 http://deb.debian.org/debian bullseye/main amd64 libnghttp2-14 amd64 1.43.0-1+deb11u1 [77.2 kB] Get:81 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:82 http://deb.debian.org/debian bullseye/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:83 http://deb.debian.org/debian bullseye/main amd64 libssh2-1 amd64 1.9.0-2+deb11u1 [156 kB] Get:84 http://deb.debian.org/debian bullseye/main amd64 libcurl4 amd64 7.74.0-1.3+deb11u13 [347 kB] Get:85 http://deb.debian.org/debian bullseye/main amd64 libdatrie1 amd64 0.2.13-1 [42.7 kB] Get:86 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get:87 http://deb.debian.org/debian bullseye/main amd64 libevent-2.1-7 amd64 2.1.12-stable-1 [188 kB] Get:88 http://deb.debian.org/debian bullseye/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-1 [139 kB] Get:89 http://deb.debian.org/debian bullseye/main amd64 libevent-extra-2.1-7 amd64 2.1.12-stable-1 [110 kB] Get:90 http://deb.debian.org/debian bullseye/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-1 [57.1 kB] Get:91 http://deb.debian.org/debian bullseye/main amd64 libevent-openssl-2.1-7 amd64 2.1.12-stable-1 [64.1 kB] Get:92 http://deb.debian.org/debian bullseye/main amd64 libevent-dev amd64 2.1.12-stable-1 [311 kB] Get:93 http://deb.debian.org/debian bullseye/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.1 [169 kB] Get:94 http://deb.debian.org/debian bullseye/main amd64 libnuma1 amd64 2.0.12-1+b1 [26.3 kB] Get:95 http://deb.debian.org/debian bullseye/main amd64 libpsm2-2 amd64 11.2.185-1 [181 kB] Get:96 http://deb.debian.org/debian bullseye/main amd64 librdmacm1 amd64 33.2-1 [68.9 kB] Get:97 http://deb.debian.org/debian bullseye/main amd64 libfabric1 amd64 1.11.0-2 [521 kB] Get:98 http://deb.debian.org/debian bullseye/main amd64 libfribidi0 amd64 1.0.8-2+deb11u1 [64.9 kB] Get:99 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-0 amd64 2.66.8-1+deb11u4 [1377 kB] Get:100 http://deb.debian.org/debian bullseye/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:101 http://deb.debian.org/debian bullseye/main amd64 libharfbuzz0b amd64 2.7.4-1 [1471 kB] Get:102 http://deb.debian.org/debian bullseye/main amd64 libhwloc15 amd64 2.4.1+dfsg-1 [150 kB] Get:103 http://deb.debian.org/debian bullseye/main amd64 libnuma-dev amd64 2.0.12-1+b1 [39.3 kB] Get:104 http://deb.debian.org/debian bullseye/main amd64 libltdl7 amd64 2.4.6-15 [391 kB] Get:105 http://deb.debian.org/debian bullseye/main amd64 libltdl-dev amd64 2.4.6-15 [162 kB] Get:106 http://deb.debian.org/debian bullseye/main amd64 libhwloc-dev amd64 2.4.1+dfsg-1 [231 kB] Get:107 http://deb.debian.org/debian bullseye/main amd64 libpciaccess0 amd64 0.16-1 [53.6 kB] Get:108 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:109 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u4 [693 kB] Get:110 http://deb.debian.org/debian bullseye/main amd64 libxnvctrl0 amd64 470.239.06-1 [27.5 kB] Get:111 http://deb.debian.org/debian bullseye/main amd64 ocl-icd-libopencl1 amd64 2.2.14-2 [42.5 kB] Get:112 http://deb.debian.org/debian bullseye/main amd64 libhwloc-plugins amd64 2.4.1+dfsg-1 [21.4 kB] Get:113 http://deb.debian.org/debian bullseye/main amd64 libnl-3-dev amd64 3.4.0-1+b1 [102 kB] Get:114 http://deb.debian.org/debian bullseye/main amd64 libnl-route-3-dev amd64 3.4.0-1+b1 [176 kB] Get:115 http://deb.debian.org/debian bullseye/main amd64 libibverbs-dev amd64 33.2-1 [487 kB] Get:116 http://deb.debian.org/debian bullseye/main amd64 x11-common all 1:7.7+22 [252 kB] Get:117 http://deb.debian.org/debian bullseye/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get:118 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:119 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get:120 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get:121 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery-ui all 1.12.1+dfsg-8+deb11u2 [232 kB] Get:122 http://deb.debian.org/debian bullseye/main amd64 liblapack3 amd64 3.9.0-3+deb11u1 [2166 kB] Get:123 http://deb.debian.org/debian bullseye/main amd64 libpmix2 amd64 4.0.0-4.1+deb11u1 [553 kB] Get:124 http://deb.debian.org/debian bullseye/main amd64 libucx0 amd64 1.10.1~rc1+really.1.10.0-1 [649 kB] Get:125 http://deb.debian.org/debian bullseye/main amd64 libopenmpi3 amd64 4.1.0-10 [2370 kB] Get:126 http://deb.debian.org/debian bullseye/main amd64 openmpi-common all 4.1.0-10 [179 kB] Get:127 http://deb.debian.org/debian bullseye/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2+deb11u2 [191 kB] Get:128 http://deb.debian.org/debian bullseye/main amd64 libpmix-dev amd64 4.0.0-4.1+deb11u1 [655 kB] Get:129 http://deb.debian.org/debian bullseye/main amd64 openmpi-bin amd64 4.1.0-10 [238 kB] Get:130 http://deb.debian.org/debian bullseye/main amd64 libopenmpi-dev amd64 4.1.0-10 [1192 kB] Get:131 http://deb.debian.org/debian bullseye/main amd64 libthai-data all 0.1.28-3 [170 kB] Get:132 http://deb.debian.org/debian bullseye/main amd64 libthai0 amd64 0.1.28-3 [54.2 kB] Get:133 http://deb.debian.org/debian bullseye/main amd64 libpango-1.0-0 amd64 1.46.2-3 [191 kB] Get:134 http://deb.debian.org/debian bullseye/main amd64 libpangoft2-1.0-0 amd64 1.46.2-3 [62.2 kB] Get:135 http://deb.debian.org/debian bullseye/main amd64 libpangocairo-1.0-0 amd64 1.46.2-3 [50.6 kB] Get:136 http://deb.debian.org/debian bullseye/main amd64 libpaper1 amd64 1.1.28+b1 [21.6 kB] Get:137 http://deb.debian.org/debian bullseye/main amd64 libpaper-utils amd64 1.1.28+b1 [18.3 kB] Get:138 http://deb.debian.org/debian bullseye/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:139 http://deb.debian.org/debian bullseye/main amd64 libtcl8.6 amd64 8.6.11+dfsg-1 [1018 kB] Get:140 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1+deb11u2 [259 kB] Get:141 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1+deb11u5 [290 kB] Get:142 http://deb.debian.org/debian bullseye/main amd64 libxft2 amd64 2.3.2-2 [57.2 kB] Get:143 http://deb.debian.org/debian bullseye/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get:144 http://deb.debian.org/debian bullseye/main amd64 libtk8.6 amd64 8.6.11-2 [780 kB] Get:145 http://deb.debian.org/debian bullseye/main amd64 libxt6 amd64 1:1.2.0-1 [189 kB] Get:146 http://deb.debian.org/debian bullseye/main amd64 mpi-default-bin amd64 1.13 [4672 B] Get:147 http://deb.debian.org/debian bullseye/main amd64 zip amd64 3.0-12 [232 kB] Get:148 http://deb.debian.org/debian bullseye/main amd64 unzip amd64 6.0-26+deb11u1 [172 kB] Get:149 http://deb.debian.org/debian bullseye/main amd64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get:150 http://deb.debian.org/debian bullseye/main amd64 r-base-core amd64 4.0.4-1 [25.1 MB] Get:151 http://deb.debian.org/debian bullseye/main amd64 r-cran-assertthat all 0.2.1-2 [56.5 kB] Get:152 http://deb.debian.org/debian bullseye/main amd64 r-cran-brio amd64 1.1.1-1 [31.7 kB] Get:153 http://deb.debian.org/debian bullseye/main amd64 r-cran-ps amd64 1.5.0-1 [277 kB] Get:154 http://deb.debian.org/debian bullseye/main amd64 r-cran-r6 all 2.5.0-1 [104 kB] Get:155 http://deb.debian.org/debian bullseye/main amd64 r-cran-processx amd64 3.4.5-1 [295 kB] Get:156 http://deb.debian.org/debian bullseye/main amd64 r-cran-callr all 3.5.1-1 [386 kB] Get:157 http://deb.debian.org/debian bullseye/main amd64 r-cran-glue amd64 1.4.2-1 [138 kB] Get:158 http://deb.debian.org/debian bullseye/main amd64 r-cran-cli all 2.3.0-1 [480 kB] Get:159 http://deb.debian.org/debian bullseye/main amd64 r-cran-colorspace amd64 2.0-0+dfsg-1 [1684 kB] Get:160 http://deb.debian.org/debian bullseye/main amd64 r-cran-crayon all 1.4.0-1 [143 kB] Get:161 http://deb.debian.org/debian bullseye/main amd64 r-cran-data.table amd64 1.13.6+dfsg-1 [1715 kB] Get:162 http://deb.debian.org/debian bullseye/main amd64 r-cran-rprojroot all 2.0.2-1 [114 kB] Get:163 http://deb.debian.org/debian bullseye/main amd64 r-cran-desc all 1.2.0-3 [301 kB] Get:164 http://deb.debian.org/debian bullseye/main amd64 r-cran-diffobj amd64 0.3.2-1 [1069 kB] Get:165 http://deb.debian.org/debian bullseye/main amd64 r-cran-digest amd64 0.6.27-1 [192 kB] Get:166 http://deb.debian.org/debian bullseye/main amd64 r-cran-rlang amd64 0.4.10-1 [1176 kB] Get:167 http://deb.debian.org/debian bullseye/main amd64 r-cran-ellipsis amd64 0.3.1-1 [31.7 kB] Get:168 http://deb.debian.org/debian bullseye/main amd64 r-cran-evaluate all 0.14-2 [81.1 kB] Get:169 http://deb.debian.org/debian bullseye/main amd64 r-cran-fansi amd64 0.4.2-1 [345 kB] Get:170 http://deb.debian.org/debian bullseye/main amd64 r-cran-farver amd64 2.0.3-1+b1 [1393 kB] Get:171 http://deb.debian.org/debian bullseye/main amd64 r-cran-gtable all 0.3.0+dfsg-2 [163 kB] Get:172 http://deb.debian.org/debian bullseye/main amd64 r-cran-jsonlite amd64 1.7.2+dfsg-1 [447 kB] Get:173 http://deb.debian.org/debian bullseye/main amd64 r-cran-lifecycle all 0.2.0-2 [93.2 kB] Get:174 http://deb.debian.org/debian bullseye/main amd64 r-cran-magrittr amd64 2.0.1-1 [198 kB] Get:175 http://deb.debian.org/debian bullseye/main amd64 r-cran-prettyunits all 1.1.1-2 [39.1 kB] Get:176 http://deb.debian.org/debian bullseye/main amd64 r-cran-withr all 2.4.1-1 [210 kB] Get:177 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgbuild all 1.2.0-1 [146 kB] Get:178 http://deb.debian.org/debian bullseye/main amd64 r-cran-rstudioapi all 0.13-1 [262 kB] Get:179 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgload amd64 1.1.0-1 [168 kB] Get:180 http://deb.debian.org/debian bullseye/main amd64 r-cran-praise all 1.0.0-4 [20.1 kB] Get:181 http://deb.debian.org/debian bullseye/main amd64 r-cran-utf8 amd64 1.1.4-2 [131 kB] Get:182 http://deb.debian.org/debian bullseye/main amd64 r-cran-vctrs amd64 0.3.6-1 [1107 kB] Get:183 http://deb.debian.org/debian bullseye/main amd64 r-cran-pillar all 1.4.7-1 [227 kB] Get:184 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get:185 http://deb.debian.org/debian bullseye/main amd64 r-cran-tibble amd64 3.0.6+dfsg-1 [416 kB] Get:186 http://deb.debian.org/debian bullseye/main amd64 r-cran-rematch2 all 2.1.2-2 [46.3 kB] Get:187 http://deb.debian.org/debian bullseye/main amd64 r-cran-waldo all 0.2.3-2 [79.3 kB] Get:188 http://deb.debian.org/debian bullseye/main amd64 r-cran-testthat amd64 3.0.1-1 [1451 kB] Get:189 http://deb.debian.org/debian bullseye/main amd64 r-cran-isoband amd64 0.2.3-2 [2085 kB] Get:190 http://deb.debian.org/debian bullseye/main amd64 r-cran-mass amd64 7.3-53.1-1 [1115 kB] Get:191 http://deb.debian.org/debian bullseye/main amd64 r-cran-lattice amd64 0.20-41-1+b1 [1164 kB] Get:192 http://deb.debian.org/debian bullseye/main amd64 r-cran-nlme amd64 3.1.152-1 [2241 kB] Get:193 http://deb.debian.org/debian bullseye/main amd64 r-cran-matrix amd64 1.3-2-1 [3604 kB] Get:194 http://deb.debian.org/debian bullseye/main amd64 r-cran-mgcv amd64 1.8-34-1 [2998 kB] Get:195 http://deb.debian.org/debian bullseye/main amd64 r-cran-labeling all 0.4.2-1 [62.7 kB] Get:196 http://deb.debian.org/debian bullseye/main amd64 r-cran-munsell all 0.5.0-2 [236 kB] Get:197 http://deb.debian.org/debian bullseye/main amd64 r-cran-rcolorbrewer all 1.1-2-3 [54.4 kB] Get:198 http://deb.debian.org/debian bullseye/main amd64 r-cran-viridislite all 0.3.0-4 [59.2 kB] Get:199 http://deb.debian.org/debian bullseye/main amd64 r-cran-scales all 1.1.1-1 [557 kB] Get:200 http://deb.debian.org/debian bullseye/main amd64 r-cran-ggplot2 all 3.3.3+dfsg-1 [3158 kB] Get:201 http://deb.debian.org/debian bullseye/main amd64 r-cran-gtools amd64 3.8.2-1+b1 [329 kB] Get:202 http://deb.debian.org/debian bullseye/main amd64 r-cran-rmpi amd64 0.6-9-1+b2 [267 kB] Get:203 http://deb.debian.org/debian bullseye/main amd64 r-cran-metamix amd64 0.3-2+b1 [744 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 164 MB in 8s (19.6 MB/s) Selecting previously unselected package perl-modules-5.32. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6674 files and directories currently installed.) Preparing to unpack .../000-perl-modules-5.32_5.32.1-4+deb11u3_all.deb ... Unpacking perl-modules-5.32 (5.32.1-4+deb11u3) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../001-libgdbm6_1.19-2_amd64.deb ... Unpacking libgdbm6:amd64 (1.19-2) ... Selecting previously unselected package libgdbm-compat4:amd64. Preparing to unpack .../002-libgdbm-compat4_1.19-2_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.19-2) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../003-libperl5.32_5.32.1-4+deb11u3_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-4+deb11u3) ... Selecting previously unselected package perl. Preparing to unpack .../004-perl_5.32.1-4+deb11u3_amd64.deb ... Unpacking perl (5.32.1-4+deb11u3) ... Selecting previously unselected package readline-common. Preparing to unpack .../005-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../006-libreadline8_8.1-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../007-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package openssl. Preparing to unpack .../008-openssl_1.1.1w-0+deb11u1_amd64.deb ... Unpacking openssl (1.1.1w-0+deb11u1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../009-ca-certificates_20210119_all.deb ... Unpacking ca-certificates (20210119) ... Selecting previously unselected package libmd0:amd64. Preparing to unpack .../010-libmd0_1.0.3-3_amd64.deb ... Unpacking libmd0:amd64 (1.0.3-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../011-libbsd0_0.11.3-1+deb11u1_amd64.deb ... Unpacking libbsd0:amd64 (0.11.3-1+deb11u1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../012-libedit2_3.1-20191231-2+b1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20191231-2+b1) ... Selecting previously unselected package libcbor0:amd64. Preparing to unpack .../013-libcbor0_0.5.0+dfsg-2_amd64.deb ... Unpacking libcbor0:amd64 (0.5.0+dfsg-2) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../014-libfido2-1_1.6.0-2_amd64.deb ... Unpacking libfido2-1:amd64 (1.6.0-2) ... Selecting previously unselected package openssh-client. Preparing to unpack .../015-openssh-client_1%3a8.4p1-5+deb11u3_amd64.deb ... Unpacking openssh-client (1:8.4p1-5+deb11u3) ... Selecting previously unselected package ucf. Preparing to unpack .../016-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../017-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../018-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../019-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../020-autotools-dev_20180224.1+nmu1_all.deb ... 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Setting up libedit2:amd64 (3.1-20191231-2+b1) ... Setting up libreadline8:amd64 (8.1-1) ... Setting up libevent-openssl-2.1-7:amd64 (2.1.12-stable-1) ... Setting up libldap-2.4-2:amd64 (2.4.57+dfsg-3+deb11u1) ... Setting up m4 (1.4.18-5) ... Setting up libxcb-shm0:amd64 (1.14-3) ... Setting up libnl-route-3-200:amd64 (3.4.0-1+b1) ... Setting up libthai0:amd64 (0.1.28-3) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) ... Setting up libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Setting up libevent-dev (2.1.12-stable-1) ... Setting up libgdbm-compat4:amd64 (1.19-2) ... Setting up ucf (3.0043) ... Setting up libperl5.32:amd64 (5.32.1-4+deb11u3) ... Setting up libnl-3-dev:amd64 (3.4.0-1+b1) ... Setting up libcurl4:amd64 (7.74.0-1.3+deb11u13) ... Setting up libc6-dev:amd64 (2.31-13+deb11u11) ... Setting up libx11-6:amd64 (2:1.7.2-1+deb11u2) ... Setting up libharfbuzz0b:amd64 (2.7.4-1) ... Setting up libgfortran-10-dev:amd64 (10.2.1-6) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up binutils-x86-64-linux-gnu (2.35.2-2) ... Setting up libpaper1:amd64 (1.1.28+b1) ... Creating config file /etc/papersize with new version Setting up libibverbs1:amd64 (33.2-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up ibverbs-providers:amd64 (33.2-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up openssh-client (1:8.4p1-5+deb11u3) ... Setting up libxext6:amd64 (2:1.3.3-1.1) ... Setting up binutils (2.35.2-2) ... Setting up libpaper-utils (1.1.28+b1) ... Setting up libnuma-dev:amd64 (2.0.12-1+b1) ... Setting up libxnvctrl0:amd64 (470.239.06-1) ... Setting up libnl-route-3-dev:amd64 (3.4.0-1+b1) ... Setting up perl (5.32.1-4+deb11u3) ... Setting up libxt6:amd64 (1:1.2.0-1) ... Setting up gcc-10 (10.2.1-6) ... Setting up autoconf (2.69-14) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2+deb11u2) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libfontconfig1:amd64 (2.13.1-4.2) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up librdmacm1:amd64 (33.2-1) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libucx0:amd64 (1.10.1~rc1+really.1.10.0-1) ... Setting up libxft2:amd64 (2.3.2-2) ... Setting up libtk8.6:amd64 (8.6.11-2) ... Setting up libpango-1.0-0:amd64 (1.46.2-3) ... Setting up libibverbs-dev:amd64 (33.2-1) ... Setting up libhwloc-plugins:amd64 (2.4.1+dfsg-1) ... Setting up libcairo2:amd64 (1.16.0-5) ... Setting up libltdl-dev:amd64 (2.4.6-15) ... Setting up gfortran-10 (10.2.1-6) ... Setting up libhwloc-dev:amd64 (2.4.1+dfsg-1) ... Setting up libpangoft2-1.0-0:amd64 (1.46.2-3) ... Setting up libpangocairo-1.0-0:amd64 (1.46.2-3) ... Setting up libfabric1 (1.11.0-2) ... Setting up libpmix2:amd64 (4.0.0-4.1+deb11u1) ... Setting up libopenmpi3:amd64 (4.1.0-10) ... Setting up r-base-core (4.0.4-1) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.4.0-1) ... Setting up r-cran-gtable (0.3.0+dfsg-2) ... Setting up r-cran-labeling (0.4.2-1) ... Setting up r-cran-lattice (0.20-41-1+b1) ... Setting up r-cran-ps (1.5.0-1) ... Setting up r-cran-nlme (3.1.152-1) ... Setting up r-cran-farver (2.0.3-1+b1) ... Setting up r-cran-viridislite (0.3.0-4) ... Setting up r-cran-r6 (2.5.0-1) ... Setting up r-cran-magrittr (2.0.1-1) ... Setting up libpmix-dev:amd64 (4.0.0-4.1+deb11u1) ... Setting up openmpi-bin (4.1.0-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up r-cran-brio (1.1.1-1) ... Setting up r-cran-diffobj (0.3.2-1) ... Setting up r-cran-rlang (0.4.10-1) ... Setting up r-cran-assertthat (0.2.1-2) ... Setting up r-cran-withr (2.4.1-1) ... Setting up r-cran-processx (3.4.5-1) ... Setting up r-cran-praise (1.0.0-4) ... Setting up r-cran-digest (0.6.27-1) ... Setting up r-cran-evaluate (0.14-2) ... Setting up r-cran-prettyunits (1.1.1-2) ... Setting up r-cran-fansi (0.4.2-1) ... Setting up mpi-default-bin (1.13) ... Setting up r-cran-mass (7.3-53.1-1) ... Setting up r-cran-gtools (3.8.2-1+b1) ... Setting up r-cran-data.table (1.13.6+dfsg-1) ... Setting up r-cran-glue (1.4.2-1) ... Setting up r-cran-cli (2.3.0-1) ... Setting up r-cran-lifecycle (0.2.0-2) ... Setting up r-cran-rprojroot (2.0.2-1) ... Setting up r-cran-rmpi (0.6-9-1+b2) ... Setting up r-cran-jsonlite (1.7.2+dfsg-1) ... Setting up r-cran-rstudioapi (0.13-1) ... Setting up r-cran-pkgconfig (2.0.3-2) ... Setting up r-cran-utf8 (1.1.4-2) ... Setting up r-cran-colorspace (2.0-0+dfsg-1) ... Setting up r-cran-rcolorbrewer (1.1-2-3) ... Setting up r-cran-matrix (1.3-2-1) ... Setting up r-cran-mgcv (1.8-34-1) ... Setting up libopenmpi-dev:amd64 (4.1.0-10) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up r-cran-ellipsis (0.3.1-1) ... Setting up r-cran-callr (3.5.1-1) ... Setting up r-cran-desc (1.2.0-3) ... Setting up r-cran-munsell (0.5.0-2) ... Setting up r-cran-scales (1.1.1-1) ... Setting up r-cran-pkgbuild (1.2.0-1) ... Setting up r-cran-vctrs (0.3.6-1) ... Setting up r-cran-pillar (1.4.7-1) ... Setting up r-cran-pkgload (1.1.0-1) ... Setting up r-cran-tibble (3.0.6+dfsg-1) ... Setting up r-cran-rematch2 (2.1.2-2) ... Setting up r-cran-waldo (0.2.3-2) ... Setting up r-cran-testthat (3.0.1-1) ... Setting up r-cran-isoband (0.2.3-2) ... Setting up r-cran-ggplot2 (3.3.3+dfsg-1) ... Setting up r-cran-metamix (0.3-2+b1) ... Processing triggers for libc-bin (2.31-13+deb11u11) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-y', 'install', 'r-cran-metamix'] 0m25.0s INFO: Running scripts post_install 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_install_exceptions'] 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_install_exceptions'] 0m25.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m25.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m25.8s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpws40x3j9 to bullseye-next 0m25.8s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main deb http://security.debian.org bullseye-security main deb http://deb.debian.org/debian/ bullseye-updates main deb http://deb.debian.org/debian/ bullseye-proposed-updates main 0m25.8s INFO: Running scripts pre_distupgrade 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_exceptions'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_exceptions'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', 'update'] 0m26.6s DUMP: Hit:1 http://deb.debian.org/debian bullseye InRelease Get:2 http://deb.debian.org/debian bullseye-updates InRelease [44.1 kB] Get:3 http://deb.debian.org/debian bullseye-proposed-updates InRelease [54.0 kB] Get:4 http://security.debian.org bullseye-security InRelease [27.2 kB] Get:5 http://deb.debian.org/debian bullseye-updates/main amd64 Packages [18.8 kB] Get:6 http://deb.debian.org/debian bullseye-updates/main Translation-en [10.9 kB] Get:7 http://security.debian.org bullseye-security/main amd64 Packages [301 kB] Get:8 http://security.debian.org bullseye-security/main Translation-en [194 kB] Fetched 650 kB in 0s (1517 kB/s) Reading package lists... 0m26.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', 'update'] 0m26.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-yf', 'dist-upgrade'] 0m27.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: e2fsprogs libcom-err2 libexpat1 libext2fs2 libgnutls30 libnghttp2-14 libss2 libsystemd0 libudev1 libxml2 linux-libc-dev logsave 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 5623 kB of archives. After this operation, 14.3 kB of additional disk space will be used. Get:1 http://security.debian.org bullseye-security/main amd64 libsystemd0 amd64 247.3-7+deb11u6 [377 kB] Get:2 http://security.debian.org bullseye-security/main amd64 logsave amd64 1.46.2-2+deb11u1 [75.0 kB] Get:3 http://security.debian.org bullseye-security/main amd64 libext2fs2 amd64 1.46.2-2+deb11u1 [257 kB] Get:4 http://security.debian.org bullseye-security/main amd64 e2fsprogs amd64 1.46.2-2+deb11u1 [614 kB] Get:5 http://security.debian.org bullseye-security/main amd64 libcom-err2 amd64 1.46.2-2+deb11u1 [74.3 kB] Get:6 http://security.debian.org bullseye-security/main amd64 libgnutls30 amd64 3.7.1-5+deb11u6 [1340 kB] Get:7 http://security.debian.org bullseye-security/main amd64 libudev1 amd64 247.3-7+deb11u6 [169 kB] Get:8 http://security.debian.org bullseye-security/main amd64 libexpat1 amd64 2.2.10-2+deb11u6 [99.0 kB] Get:9 http://security.debian.org bullseye-security/main amd64 libnghttp2-14 amd64 1.43.0-1+deb11u2 [77.0 kB] Get:10 http://security.debian.org bullseye-security/main amd64 libss2 amd64 1.46.2-2+deb11u1 [78.9 kB] Get:11 http://security.debian.org bullseye-security/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u5 [693 kB] Get:12 http://security.debian.org bullseye-security/main amd64 linux-libc-dev amd64 5.10.226-1 [1770 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5623 kB in 0s (129 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22292 files and directories currently installed.) Preparing to unpack .../libsystemd0_247.3-7+deb11u6_amd64.deb ... Unpacking libsystemd0:amd64 (247.3-7+deb11u6) over (247.3-7+deb11u5) ... Setting up libsystemd0:amd64 (247.3-7+deb11u6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22292 files and directories currently installed.) Preparing to unpack .../logsave_1.46.2-2+deb11u1_amd64.deb ... Unpacking logsave (1.46.2-2+deb11u1) over (1.46.2-2) ... Preparing to unpack .../libext2fs2_1.46.2-2+deb11u1_amd64.deb ... Unpacking libext2fs2:amd64 (1.46.2-2+deb11u1) over (1.46.2-2) ... Setting up libext2fs2:amd64 (1.46.2-2+deb11u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22292 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.46.2-2+deb11u1_amd64.deb ... Unpacking e2fsprogs (1.46.2-2+deb11u1) over (1.46.2-2) ... Preparing to unpack .../libcom-err2_1.46.2-2+deb11u1_amd64.deb ... Unpacking libcom-err2:amd64 (1.46.2-2+deb11u1) over (1.46.2-2) ... Setting up libcom-err2:amd64 (1.46.2-2+deb11u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22292 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.7.1-5+deb11u6_amd64.deb ... Unpacking libgnutls30:amd64 (3.7.1-5+deb11u6) over (3.7.1-5+deb11u5) ... Setting up libgnutls30:amd64 (3.7.1-5+deb11u6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22292 files and directories currently installed.) Preparing to unpack .../libudev1_247.3-7+deb11u6_amd64.deb ... Unpacking libudev1:amd64 (247.3-7+deb11u6) over (247.3-7+deb11u5) ... Setting up libudev1:amd64 (247.3-7+deb11u6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22292 files and directories currently installed.) Preparing to unpack .../libexpat1_2.2.10-2+deb11u6_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-2+deb11u6) over (2.2.10-2+deb11u5) ... Preparing to unpack .../libnghttp2-14_1.43.0-1+deb11u2_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.43.0-1+deb11u2) over (1.43.0-1+deb11u1) ... Preparing to unpack .../libss2_1.46.2-2+deb11u1_amd64.deb ... Unpacking libss2:amd64 (1.46.2-2+deb11u1) over (1.46.2-2) ... Preparing to unpack .../libxml2_2.9.10+dfsg-6.7+deb11u5_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6.7+deb11u5) over (2.9.10+dfsg-6.7+deb11u4) ... Preparing to unpack .../linux-libc-dev_5.10.226-1_amd64.deb ... Unpacking linux-libc-dev:amd64 (5.10.226-1) over (5.10.223-1) ... Setting up libexpat1:amd64 (2.2.10-2+deb11u6) ... Setting up libnghttp2-14:amd64 (1.43.0-1+deb11u2) ... Setting up linux-libc-dev:amd64 (5.10.226-1) ... Setting up libss2:amd64 (1.46.2-2+deb11u1) ... Setting up logsave (1.46.2-2+deb11u1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7+deb11u5) ... Setting up e2fsprogs (1.46.2-2+deb11u1) ... Processing triggers for libc-bin (2.31-13+deb11u11) ... 0m27.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-yf', 'dist-upgrade'] 0m27.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m27.9s DUMP: b40e1ef626f4771f3ac959874860074b - 0m27.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m27.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'show', '--no-all-versions', 'r-cran-metamix'] 0m28.0s DUMP: Package: r-cran-metamix Source: r-cran-metamix (0.3-2) Version: 0.3-2+b1 Installed-Size: 1759 Maintainer: Debian R Packages Maintainers Architecture: amd64 Depends: r-base-core (>= 4.0.0-3), r-api-4.0, r-cran-data.table (>= 1.9.2), r-cran-matrix, r-cran-gtools, r-cran-rmpi, r-cran-ggplot2, libc6 (>= 2.2.5), libstdc++6 (>= 4.9), libopenmpi-dev Suggests: r-cran-knitr Description-en: GNU R bayesian mixture analysis for metagenomic community profiling Resolves complex metagenomic mixtures by analysing deep sequencing data, using a mixture model based approach. The use of parallel Monte Carlo Markov chains for the exploration of the species space enables the identification of the set of species more likely to contribute to the mixture. Description-md5: 9f51ca1b979fb77ee86077f0f70ab8bf Homepage: https://cran.r-project.org/package=metaMix Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-metamix/r-cran-metamix_0.3-2+b1_amd64.deb Size: 743660 MD5sum: be9348bd8eac209c3b8021036c690bb6 SHA256: 30cbccdaccca9c612c31efbce8b9342cc1ca4850c31e82ddb1b435f9cb82c273 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'show', '--no-all-versions', 'r-cran-metamix'] 0m28.0s INFO: apt-cache knows about the following packages: r-cran-metamix 0m28.0s INFO: Running scripts pre_install 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_database-server'] 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_database-server'] 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_exceptions'] 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_exceptions'] 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_extras'] 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_extras'] 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture'] 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture'] 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy'] 0m28.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye-updates/main amd64 Packages release v=11-updates,o=Debian,a=oldstable-updates,n=bullseye-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://security.debian.org bullseye-security/main amd64 Packages release v=11,o=Debian,a=oldstable-security,n=bullseye-security,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian bullseye/main amd64 Packages release v=11.11,o=Debian,a=oldstable,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy'] 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy', 'r-cran-metamix'] 0m28.1s DUMP: r-cran-metamix: Installed: 0.3-2+b1 Candidate: 0.3-2+b1 Version table: *** 0.3-2+b1 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 100 /var/lib/dpkg/status 0m28.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy', 'r-cran-metamix'] 0m28.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-y', 'install', 'r-cran-metamix'] 0m28.2s DUMP: Reading package lists... Building dependency tree... Reading state information... r-cran-metamix is already the newest version (0.3-2+b1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-y', 'install', 'r-cran-metamix'] 0m28.2s INFO: Running scripts post_install 0m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_install_exceptions'] 0m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_install_exceptions'] 0m28.2s INFO: Running scripts post_distupgrade 0m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_exceptions'] 0m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_exceptions'] 0m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_zz_backports'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_distupgrade_zz_backports'] 0m28.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m28.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m28.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m29.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m29.6s INFO: Running scripts pre_install 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_database-server'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_database-server'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_exceptions'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_exceptions'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_extras'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_extras'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy'] 0m29.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye-updates/main amd64 Packages release v=11-updates,o=Debian,a=oldstable-updates,n=bullseye-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://security.debian.org bullseye-security/main amd64 Packages release v=11,o=Debian,a=oldstable-security,n=bullseye-security,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian bullseye/main amd64 Packages release v=11.11,o=Debian,a=oldstable,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy', 'r-cran-metamix'] 0m29.6s DUMP: r-cran-metamix: Installed: 0.3-2+b1 Candidate: 0.3-2+b1 Version table: *** 0.3-2+b1 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 100 /var/lib/dpkg/status 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-cache', 'policy', 'r-cran-metamix'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-y', 'install', 'r-cran-metamix=0.3-2+b1'] 0m29.8s DUMP: Reading package lists... Building dependency tree... Reading state information... r-cran-metamix is already the newest version (0.3-2+b1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', '-y', 'install', 'r-cran-metamix=0.3-2+b1'] 0m29.8s INFO: Running scripts post_install 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_install_exceptions'] 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_install_exceptions'] 0m29.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m30.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m30.5s DEBUG: No file moved between /{bin|sbin|lib*} and /usr/{bin|sbin|lib*}. 0m30.6s INFO: /bin converted to /usr/bin by /usr merge 0m30.6s INFO: /lib converted to /usr/lib by /usr merge 0m30.6s INFO: /lib/init converted to /usr/lib/init by /usr merge 0m30.6s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 0m30.6s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 0m30.6s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 0m30.6s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 0m30.6s INFO: /lib/terminfo converted to /usr/lib/terminfo by /usr merge 0m30.6s INFO: /lib/terminfo/E converted to /usr/lib/terminfo/E by /usr merge 0m30.6s INFO: /lib/terminfo/a converted to /usr/lib/terminfo/a by /usr merge 0m30.6s INFO: /lib/terminfo/c converted to /usr/lib/terminfo/c by /usr merge 0m30.6s INFO: /lib/terminfo/d converted to /usr/lib/terminfo/d by /usr merge 0m30.6s INFO: /lib/terminfo/h converted to /usr/lib/terminfo/h by /usr merge 0m30.6s INFO: /lib/terminfo/l converted to /usr/lib/terminfo/l by /usr merge 0m30.6s INFO: /lib/terminfo/m converted to /usr/lib/terminfo/m by /usr merge 0m30.6s INFO: /lib/terminfo/p converted to /usr/lib/terminfo/p by /usr merge 0m30.6s INFO: /lib/terminfo/r converted to /usr/lib/terminfo/r by /usr merge 0m30.6s INFO: /lib/terminfo/s converted to /usr/lib/terminfo/s by /usr merge 0m30.6s INFO: /lib/terminfo/t converted to /usr/lib/terminfo/t by /usr merge 0m30.6s INFO: /lib/terminfo/v converted to /usr/lib/terminfo/v by /usr merge 0m30.6s INFO: /lib/terminfo/w converted to /usr/lib/terminfo/w by /usr merge 0m30.6s INFO: /lib/terminfo/x converted to /usr/lib/terminfo/x by /usr merge 0m30.6s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 0m30.6s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 0m30.6s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 0m30.6s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 0m30.6s INFO: /lib64 converted to /usr/lib64 by /usr merge 0m30.6s INFO: /sbin converted to /usr/sbin by /usr merge 0m31.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', '-ac', '--ignore-obsolete'] 0m32.8s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', '-ac', '--ignore-obsolete'] 0m32.8s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m32.8s DUMP: 0.15.6 0m32.8s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m32.8s INFO: Running adequate version 0.15.6 now. 0m32.8s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'r-cran-metamix'] 0m32.9s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'r-cran-metamix'] 0m32.9s INFO: Running scripts pre_remove 0m32.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m32.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m32.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m32.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m32.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m36.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m36.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m36.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m36.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m36.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m36.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_exceptions'] 0m36.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/pre_remove_exceptions'] 0m36.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m36.5s DUMP: install ok installed adduser adduser 3.118+deb11u1 install ok installed apt apt 2.2.4 install ok installed autoconf autoconf 2.69-14 install ok installed automake automake 1:1.16.3-2 install ok installed autotools-dev autotools-dev 20180224.1+nmu1 install ok installed base-files base-files 11.1+deb11u11 install ok installed base-passwd base-passwd 3.5.51 install ok installed bash bash 5.1-2+deb11u1 install ok installed binutils binutils 2.35.2-2 install ok installed binutils-common:amd64 binutils-common 2.35.2-2 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.35.2-2 install ok installed bsdutils bsdutils 1:2.36.1-8+deb11u2 install ok installed ca-certificates ca-certificates 20210119 install ok installed coreutils coreutils 8.32-4+b1 install ok installed cpp-10 cpp-10 10.2.1-6 install ok installed dash dash 0.5.11+git20200708+dd9ef66-5 install ok installed debconf debconf 1.5.77 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1+deb11u1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-5 install ok installed dpkg dpkg 1.20.13 install ok installed e2fsprogs e2fsprogs 1.46.2-2+deb11u1 install ok installed findutils findutils 4.8.0-1 install ok installed fontconfig fontconfig 2.13.1-4.2 install ok installed fontconfig-config fontconfig-config 2.13.1-4.2 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-2 install ok installed gcc-10 gcc-10 10.2.1-6 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-22 install ok installed gfortran-10 gfortran-10 10.2.1-6 install ok installed gpgv gpgv 2.2.27-2+deb11u2 install ok installed grep grep 3.6-1+deb11u1 install ok installed gzip gzip 1.10-4+deb11u1 install ok installed hostname hostname 3.23 install ok installed ibverbs-providers:amd64 ibverbs-providers 33.2-1 install ok installed init-system-helpers init-system-helpers 1.60 install ok installed libacl1:amd64 libacl1 2.2.53-10 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.2.4 install ok installed libasan6:amd64 libasan6 10.2.1-6 install ok installed libatomic1:amd64 libatomic1 10.2.1-6 install ok installed libattr1:amd64 libattr1 1:2.4.48-6 install ok installed libaudit-common libaudit-common 1:3.0-2 install ok installed libaudit1:amd64 libaudit1 1:3.0-2 install ok installed libbinutils:amd64 libbinutils 2.35.2-2 install ok installed libblas3:amd64 libblas3 3.9.0-3+deb11u1 install ok installed libblkid1:amd64 libblkid1 2.36.1-8+deb11u2 install ok installed libbrotli1:amd64 libbrotli1 1.0.9-2+b2 install ok installed libbsd0:amd64 libbsd0 0.11.3-1+deb11u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-13+deb11u11 install ok installed libc-dev-bin libc-dev-bin 2.31-13+deb11u11 install ok installed libc6:amd64 libc6 2.31-13+deb11u11 install ok installed libc6-dev:amd64 libc6-dev 2.31-13+deb11u11 install ok installed libcairo2:amd64 libcairo2 1.16.0-5 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcbor0:amd64 libcbor0 0.5.0+dfsg-2 install ok installed libcc1-0:amd64 libcc1-0 10.2.1-6 install ok installed libcom-err2:amd64 libcom-err2 1.46.2-2+deb11u1 install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.18-4 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.18-4 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.35.2-2 install ok installed libctf0:amd64 libctf0 2.35.2-2 install ok installed libcurl4:amd64 libcurl4 7.74.0-1.3+deb11u13 install ok installed libdatrie1:amd64 libdatrie1 0.2.13-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.8 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.260 install ok installed libdeflate0:amd64 libdeflate0 1.7-1 install ok installed libedit2:amd64 libedit2 3.1-20191231-2+b1 install ok installed libevent-2.1-7:amd64 libevent-2.1-7 2.1.12-stable-1 install ok installed libevent-core-2.1-7:amd64 libevent-core-2.1-7 2.1.12-stable-1 install ok installed libevent-dev libevent-dev 2.1.12-stable-1 install ok installed libevent-extra-2.1-7:amd64 libevent-extra-2.1-7 2.1.12-stable-1 install ok installed libevent-openssl-2.1-7:amd64 libevent-openssl-2.1-7 2.1.12-stable-1 install ok installed libevent-pthreads-2.1-7:amd64 libevent-pthreads-2.1-7 2.1.12-stable-1 install ok installed libexpat1:amd64 libexpat1 2.2.10-2+deb11u6 install ok installed libext2fs2:amd64 libext2fs2 1.46.2-2+deb11u1 install ok installed libfabric1 libfabric1 1.11.0-2 install ok installed libffi7:amd64 libffi7 3.3-6 install ok installed libfido2-1:amd64 libfido2-1 1.6.0-2 install ok installed libfontconfig1:amd64 libfontconfig1 2.13.1-4.2 install ok installed libfreetype6:amd64 libfreetype6 2.10.4+dfsg-1+deb11u1 install ok installed libfribidi0:amd64 libfribidi0 1.0.8-2+deb11u1 install ok installed libgcc-10-dev:amd64 libgcc-10-dev 10.2.1-6 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.1-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-6 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.19-2 install ok installed libgdbm6:amd64 libgdbm6 1.19-2 install ok installed libgfortran-10-dev:amd64 libgfortran-10-dev 10.2.1-6 install ok installed libgfortran5:amd64 libgfortran5 10.2.1-6 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.66.8-1+deb11u4 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1+deb11u1 install ok installed libgnutls30:amd64 libgnutls30 3.7.1-5+deb11u6 install ok installed libgomp1:amd64 libgomp1 10.2.1-6 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-6+deb11u5 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 2.7.4-1 install ok installed libhogweed6:amd64 libhogweed6 3.7.3-1 install ok installed libhwloc-dev:amd64 libhwloc-dev 2.4.1+dfsg-1 install ok installed libhwloc-plugins:amd64 libhwloc-plugins 2.4.1+dfsg-1 install ok installed libhwloc15:amd64 libhwloc15 2.4.1+dfsg-1 install ok installed libibverbs-dev:amd64 libibverbs-dev 33.2-1 install ok installed libibverbs1:amd64 libibverbs1 33.2-1 install ok installed libice6:amd64 libice6 2:1.0.10-1 install ok installed libicu67:amd64 libicu67 67.1-7 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-5 install ok installed libisl23:amd64 libisl23 0.23-1 install ok installed libitm1:amd64 libitm1 10.2.1-6 install ok installed libjbig0:amd64 libjbig0 2.1-3.1+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.0.6-4 install ok installed libjs-jquery libjs-jquery 3.5.1+dfsg+~3.5.5-7 install ok installed libjs-jquery-ui libjs-jquery-ui 1.12.1+dfsg-8+deb11u2 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-6+deb11u5 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-6+deb11u5 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-6+deb11u5 install ok installed liblapack3:amd64 liblapack3 3.9.0-3+deb11u1 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.57+dfsg-3+deb11u1 install ok installed liblsan0:amd64 liblsan0 10.2.1-6 install ok installed libltdl-dev:amd64 libltdl-dev 2.4.6-15 install ok installed libltdl7:amd64 libltdl7 2.4.6-15 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1~deb11u1 install ok installed libmd0:amd64 libmd0 1.0.3-3 install ok installed libmount1:amd64 libmount1 2.36.1-8+deb11u2 install ok installed libmpc3:amd64 libmpc3 1.2.0-1 install ok installed libmpfr6:amd64 libmpfr6 4.1.0-3 install ok installed libnettle8:amd64 libnettle8 3.7.3-1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.43.0-1+deb11u2 install ok installed libnl-3-200:amd64 libnl-3-200 3.4.0-1+b1 install ok installed libnl-3-dev:amd64 libnl-3-dev 3.4.0-1+b1 install ok installed libnl-route-3-200:amd64 libnl-route-3-200 3.4.0-1+b1 install ok installed libnl-route-3-dev:amd64 libnl-route-3-dev 3.4.0-1+b1 install ok installed libnsl-dev:amd64 libnsl-dev 1.3.0-2 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libnuma-dev:amd64 libnuma-dev 2.0.12-1+b1 install ok installed libnuma1:amd64 libnuma1 2.0.12-1+b1 install ok installed libopenmpi-dev:amd64 libopenmpi-dev 4.1.0-10 install ok installed libopenmpi3:amd64 libopenmpi3 4.1.0-10 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.22-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-9+deb11u1 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-9+deb11u1 install ok installed libpam-runtime libpam-runtime 1.4.0-9+deb11u1 install ok installed libpam0g:amd64 libpam0g 1.4.0-9+deb11u1 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.46.2-3 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.46.2-3 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.46.2-3 install ok installed libpaper-utils libpaper-utils 1.1.28+b1 install ok installed libpaper1:amd64 libpaper1 1.1.28+b1 install ok installed libpciaccess0:amd64 libpciaccess0 0.16-1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.36-2+deb11u1 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libperl5.32:amd64 libperl5.32 5.32.1-4+deb11u3 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.40.0-1.1~deb11u1 install ok installed libpmix-dev:amd64 libpmix-dev 4.0.0-4.1+deb11u1 install ok installed libpmix2:amd64 libpmix2 4.0.0-4.1+deb11u1 install ok installed libpng16-16:amd64 libpng16-16 1.6.37-3 install ok installed libpsl5:amd64 libpsl5 0.21.0-1.2 install ok installed libpsm-infinipath1 libpsm-infinipath1 3.3+20.604758e7-6.1 install ok installed libpsm2-2 libpsm2-2 11.2.185-1 install ok installed libquadmath0:amd64 libquadmath0 10.2.1-6 install ok installed librdmacm1:amd64 librdmacm1 33.2-1 install ok installed libreadline8:amd64 libreadline8 8.1-1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.27+dfsg-2.1+deb11u1 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.27+dfsg-2.1+deb11u1 install ok installed libseccomp2:amd64 libseccomp2 2.5.1-1+deb11u1 install ok installed libselinux1:amd64 libselinux1 3.1-3 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b2 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsigsegv2:amd64 libsigsegv2 2.13-1 install ok installed libsm6:amd64 libsm6 2:1.2.3-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-8+deb11u2 install ok installed libss2:amd64 libss2 1.46.2-2+deb11u1 install ok installed libssh2-1:amd64 libssh2-1 1.9.0-2+deb11u1 install ok installed libssl1.1:amd64 libssl1.1 1.1.1w-0+deb11u1 install ok installed libstdc++6:amd64 libstdc++6 10.2.1-6 install ok installed libsystemd0:amd64 libsystemd0 247.3-7+deb11u6 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2+deb11u1 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.11+dfsg-1 install ok installed libthai-data libthai-data 0.1.28-3 install ok installed libthai0:amd64 libthai0 0.1.28-3 install ok installed libtiff5:amd64 libtiff5 4.2.0-1+deb11u5 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-2+deb11u2 install ok installed libtirpc-common libtirpc-common 1.3.1-1+deb11u1 install ok installed libtirpc-dev:amd64 libtirpc-dev 1.3.1-1+deb11u1 install ok installed libtirpc3:amd64 libtirpc3 1.3.1-1+deb11u1 install ok installed libtk8.6:amd64 libtk8.6 8.6.11-2 install ok installed libtsan0:amd64 libtsan0 10.2.1-6 install ok installed libubsan1:amd64 libubsan1 10.2.1-6 install ok installed libucx0:amd64 libucx0 1.10.1~rc1+really.1.10.0-1 install ok installed libudev1:amd64 libudev1 247.3-7+deb11u6 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-8+deb11u2 install ok installed libwebp6:amd64 libwebp6 0.6.1-2.1+deb11u2 install ok installed libx11-6:amd64 libx11-6 2:1.7.2-1+deb11u2 install ok installed libx11-data libx11-data 2:1.7.2-1+deb11u2 install ok installed libxau6:amd64 libxau6 1:1.0.9-1 install ok installed libxcb-render0:amd64 libxcb-render0 1.14-3 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.14-3 install ok installed libxcb1:amd64 libxcb1 1.14-3 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.3-1.1 install ok installed libxft2:amd64 libxft2 2.3.2-2 install ok installed libxml2:amd64 libxml2 2.9.10+dfsg-6.7+deb11u5 install ok installed libxnvctrl0:amd64 libxnvctrl0 470.239.06-1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1 install ok installed libxt6:amd64 libxt6 1:1.2.0-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.0-2 install ok installed libzstd1:amd64 libzstd1 1.4.8+dfsg-2.1 install ok installed linux-libc-dev:amd64 linux-libc-dev 5.10.226-1 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.46.2-2+deb11u1 install ok installed lsb-base lsb-base 11.1.0 install ok installed m4 m4 1.4.18-5 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36.1-8+deb11u2 install ok installed mpi-default-bin mpi-default-bin 1.13 install ok installed ncurses-base ncurses-base 6.2+20201114-2+deb11u2 install ok installed ncurses-bin ncurses-bin 6.2+20201114-2+deb11u2 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.2.14-2 install ok installed openmpi-bin openmpi-bin 4.1.0-10 install ok installed openmpi-common openmpi-common 4.1.0-10 install ok installed openssh-client openssh-client 1:8.4p1-5+deb11u3 install ok installed openssl openssl 1.1.1w-0+deb11u1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl perl 5.32.1-4+deb11u3 install ok installed perl-base perl-base 5.32.1-4+deb11u3 install ok installed perl-modules-5.32 perl-modules-5.32 5.32.1-4+deb11u3 install ok installed r-base-core r-base-core 4.0.4-1 install ok installed r-cran-assertthat r-cran-assertthat 0.2.1-2 install ok installed r-cran-brio r-cran-brio 1.1.1-1 install ok installed r-cran-callr r-cran-callr 3.5.1-1 install ok installed r-cran-cli r-cran-cli 2.3.0-1 install ok installed r-cran-colorspace r-cran-colorspace 2.0-0+dfsg-1 install ok installed r-cran-crayon r-cran-crayon 1.4.0-1 install ok installed r-cran-data.table r-cran-data.table 1.13.6+dfsg-1 install ok installed r-cran-desc r-cran-desc 1.2.0-3 install ok installed r-cran-diffobj r-cran-diffobj 0.3.2-1 install ok installed r-cran-digest r-cran-digest 0.6.27-1 install ok installed r-cran-ellipsis r-cran-ellipsis 0.3.1-1 install ok installed r-cran-evaluate r-cran-evaluate 0.14-2 install ok installed r-cran-fansi r-cran-fansi 0.4.2-1 install ok installed r-cran-farver r-cran-farver 2.0.3-1+b1 install ok installed r-cran-ggplot2 r-cran-ggplot2 3.3.3+dfsg-1 install ok installed r-cran-glue r-cran-glue 1.4.2-1 install ok installed r-cran-gtable r-cran-gtable 0.3.0+dfsg-2 install ok installed r-cran-gtools r-cran-gtools 3.8.2-1+b1 install ok installed r-cran-isoband r-cran-isoband 0.2.3-2 install ok installed r-cran-jsonlite r-cran-jsonlite 1.7.2+dfsg-1 install ok installed r-cran-labeling r-cran-labeling 0.4.2-1 install ok installed r-cran-lattice r-cran-lattice 0.20-41-1+b1 install ok installed r-cran-lifecycle r-cran-lifecycle 0.2.0-2 install ok installed r-cran-magrittr r-cran-magrittr 2.0.1-1 install ok installed r-cran-mass r-cran-mass 7.3-53.1-1 install ok installed r-cran-matrix r-cran-matrix 1.3-2-1 install ok installed r-cran-metamix r-cran-metamix 0.3-2+b1 install ok installed r-cran-mgcv r-cran-mgcv 1.8-34-1 install ok installed r-cran-munsell r-cran-munsell 0.5.0-2 install ok installed r-cran-nlme r-cran-nlme 3.1.152-1 install ok installed r-cran-pillar r-cran-pillar 1.4.7-1 install ok installed r-cran-pkgbuild r-cran-pkgbuild 1.2.0-1 install ok installed r-cran-pkgconfig r-cran-pkgconfig 2.0.3-2 install ok installed r-cran-pkgload r-cran-pkgload 1.1.0-1 install ok installed r-cran-praise r-cran-praise 1.0.0-4 install ok installed r-cran-prettyunits r-cran-prettyunits 1.1.1-2 install ok installed r-cran-processx r-cran-processx 3.4.5-1 install ok installed r-cran-ps r-cran-ps 1.5.0-1 install ok installed r-cran-r6 r-cran-r6 2.5.0-1 install ok installed r-cran-rcolorbrewer r-cran-rcolorbrewer 1.1-2-3 install ok installed r-cran-rematch2 r-cran-rematch2 2.1.2-2 install ok installed r-cran-rlang r-cran-rlang 0.4.10-1 install ok installed r-cran-rmpi r-cran-rmpi 0.6-9-1+b2 install ok installed r-cran-rprojroot r-cran-rprojroot 2.0.2-1 install ok installed r-cran-rstudioapi r-cran-rstudioapi 0.13-1 install ok installed r-cran-scales r-cran-scales 1.1.1-1 install ok installed r-cran-testthat r-cran-testthat 3.0.1-1 install ok installed r-cran-tibble r-cran-tibble 3.0.6+dfsg-1 install ok installed r-cran-utf8 r-cran-utf8 1.1.4-2 install ok installed r-cran-vctrs r-cran-vctrs 0.3.6-1 install ok installed r-cran-viridislite r-cran-viridislite 0.3.0-4 install ok installed r-cran-waldo r-cran-waldo 0.2.3-2 install ok installed r-cran-withr r-cran-withr 2.4.1-1 install ok installed readline-common readline-common 8.1-1 install ok installed sed sed 4.7-1 install ok installed sensible-utils sensible-utils 0.0.14 install ok installed sysvinit-utils sysvinit-utils 2.96-7+deb11u1 install ok installed tar tar 1.34+dfsg-1+deb11u1 install ok installed tzdata tzdata 2024a-0+deb11u1 install ok installed ucf ucf 3.0043 install ok installed unzip unzip 6.0-26+deb11u1 install ok installed util-linux util-linux 2.36.1-8+deb11u2 install ok installed x11-common x11-common 1:7.7+22 install ok installed xdg-utils xdg-utils 1.1.3-4.1 install ok installed zip zip 3.0-12 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2+deb11u2 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.2.11.dfsg-2+deb11u2 0m36.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m36.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', 'remove', 'autoconf', 'automake', 'autotools-dev', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'ca-certificates', 'cpp-10', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'gcc-10', 'gfortran-10', 'ibverbs-providers:amd64', 'libasan6:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcbor0:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libedit2:amd64', 'libevent-2.1-7:amd64', 'libevent-core-2.1-7:amd64', 'libevent-dev', 'libevent-extra-2.1-7:amd64', 'libevent-openssl-2.1-7:amd64', 'libevent-pthreads-2.1-7:amd64', 'libexpat1:amd64', 'libfabric1', 'libfido2-1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-10-dev:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran-10-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libharfbuzz0b:amd64', 'libhwloc-dev:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibverbs-dev:amd64', 'libibverbs1:amd64', 'libice6:amd64', 'libicu67:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmd0:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-3-dev:amd64', 'libnl-route-3-200:amd64', 'libnl-route-3-dev:amd64', 'libnsl-dev:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev:amd64', 'libopenmpi3:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpciaccess0:amd64', 'libperl5.32:amd64', 'libpixman-1-0:amd64', 'libpmix-dev:amd64', 'libpmix2:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libquadmath0:amd64', 'librdmacm1:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsigsegv2:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtirpc-dev:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libucx0:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxnvctrl0:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'm4', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssl', 'perl', 'perl-modules-5.32', 'r-base-core', 'r-cran-assertthat', 'r-cran-brio', 'r-cran-callr', 'r-cran-cli', 'r-cran-colorspace', 'r-cran-crayon', 'r-cran-data.table', 'r-cran-desc', 'r-cran-diffobj', 'r-cran-digest', 'r-cran-ellipsis', 'r-cran-evaluate', 'r-cran-fansi', 'r-cran-farver', 'r-cran-ggplot2', 'r-cran-glue', 'r-cran-gtable', 'r-cran-gtools', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-pillar', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgload', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-processx', 'r-cran-ps', 'r-cran-r6', 'r-cran-rcolorbrewer', 'r-cran-rematch2', 'r-cran-rlang', 'r-cran-rmpi', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-testthat', 'r-cran-tibble', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-waldo', 'r-cran-withr', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'zlib1g-dev:amd64', 'r-cran-metamix'] 0m37.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: autoconf automake autotools-dev binutils binutils-common binutils-x86-64-linux-gnu ca-certificates cpp-10 fontconfig fontconfig-config fonts-dejavu-core gcc-10 gfortran-10 ibverbs-providers libasan6 libatomic1 libbinutils libblas3 libbrotli1 libbsd0 libc-dev-bin libc6-dev libcairo2 libcbor0 libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libcurl4 libdatrie1 libdeflate0 libedit2 libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libexpat1 libfabric1 libfido2-1 libfontconfig1 libfreetype6 libfribidi0 libgcc-10-dev libgdbm-compat4 libgdbm6 libgfortran-10-dev libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0b libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libice6 libicu67 libisl23 libitm1 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui liblapack3 libldap-2.4-2 liblsan0 libltdl-dev libltdl7 libmd0 libmpc3 libmpfr6 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnsl-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpciaccess0 libperl5.32 libpixman-1-0 libpmix-dev libpmix2 libpng16-16 libpsl5 libpsm-infinipath1 libpsm2-2 libquadmath0 librdmacm1 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh2-1 libtcl8.6 libthai-data libthai0 libtiff5 libtirpc-dev libtk8.6 libtsan0 libubsan1 libucx0 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxnvctrl0 libxrender1 libxss1 libxt6 linux-libc-dev m4 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssl perl perl-modules-5.32 r-base-core r-cran-assertthat r-cran-brio r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-data.table r-cran-desc r-cran-diffobj r-cran-digest r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-gtools r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-magrittr r-cran-mass r-cran-matrix r-cran-metamix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgload r-cran-praise r-cran-prettyunits r-cran-processx r-cran-ps r-cran-r6 r-cran-rcolorbrewer r-cran-rematch2 r-cran-rlang r-cran-rmpi r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-waldo r-cran-withr readline-common sensible-utils ucf unzip x11-common xdg-utils zip zlib1g-dev 0 upgraded, 0 newly installed, 203 to remove and 0 not upgraded. After this operation, 494 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22292 files and directories currently installed.) Removing r-cran-metamix (0.3-2+b1) ... Removing libopenmpi-dev:amd64 (4.1.0-10) ... Removing libpmix-dev:amd64 (4.0.0-4.1+deb11u1) ... Removing libhwloc-dev:amd64 (2.4.1+dfsg-1) ... Removing libltdl-dev:amd64 (2.4.6-15) ... Removing automake (1:1.16.3-2) ... Removing autoconf (2.69-14) ... Removing autotools-dev (20180224.1+nmu1) ... Removing gfortran-10 (10.2.1-6) ... Removing gcc-10 (10.2.1-6) ... Removing binutils (2.35.2-2) ... Removing binutils-x86-64-linux-gnu (2.35.2-2) ... Removing libctf0:amd64 (2.35.2-2) ... Removing libbinutils:amd64 (2.35.2-2) ... Removing binutils-common:amd64 (2.35.2-2) ... Removing r-cran-rmpi (0.6-9-1+b2) ... Removing r-cran-ggplot2 (3.3.3+dfsg-1) ... Removing r-cran-mgcv (1.8-34-1) ... Removing r-cran-matrix (1.3-2-1) ... Removing r-cran-scales (1.1.1-1) ... Removing r-cran-rcolorbrewer (1.1-2-3) ... Removing r-cran-isoband (0.2.3-2) ... Removing r-cran-testthat (3.0.1-1) ... Removing r-cran-pkgload (1.1.0-1) ... Removing r-cran-pkgbuild (1.2.0-1) ... Removing r-cran-withr (2.4.1-1) ... Removing cpp-10 (10.2.1-6) ... Removing mpi-default-bin (1.13) ... Removing openmpi-bin (4.1.0-10) ... Removing libopenmpi3:amd64 (4.1.0-10) ... Removing libucx0:amd64 (1.10.1~rc1+really.1.10.0-1) ... Removing libibverbs-dev:amd64 (33.2-1) ... Removing libgfortran-10-dev:amd64 (10.2.1-6) ... Removing libgcc-10-dev:amd64 (10.2.1-6) ... Removing libasan6:amd64 (10.2.1-6) ... Removing libatomic1:amd64 (10.2.1-6) ... Removing libpmix2:amd64 (4.0.0-4.1+deb11u1) ... Removing libhwloc-plugins:amd64 (2.4.1+dfsg-1) ... Removing libxnvctrl0:amd64 (470.239.06-1) ... Removing zlib1g-dev:amd64 (1:1.2.11.dfsg-2+deb11u2) ... Removing libnuma-dev:amd64 (2.0.12-1+b1) ... Removing libc6-dev:amd64 (2.31-13+deb11u11) ... Removing libc-dev-bin (2.31-13+deb11u11) ... Removing openssh-client (1:8.4p1-5+deb11u3) ... Removing libfido2-1:amd64 (1.6.0-2) ... Removing libcbor0:amd64 (0.5.0+dfsg-2) ... Removing libcc1-0:amd64 (10.2.1-6) ... Removing libcrypt-dev:amd64 (1:4.4.18-4) ... Removing libctf-nobfd0:amd64 (2.35.2-2) ... Removing libedit2:amd64 (3.1-20191231-2+b1) ... Removing libevent-dev (2.1.12-stable-1) ... Removing libevent-2.1-7:amd64 (2.1.12-stable-1) ... Removing libevent-pthreads-2.1-7:amd64 (2.1.12-stable-1) ... Removing libevent-openssl-2.1-7:amd64 (2.1.12-stable-1) ... Removing libevent-extra-2.1-7:amd64 (2.1.12-stable-1) ... Removing libfabric1 (1.11.0-2) ... Removing perl (5.32.1-4+deb11u3) ... Removing libperl5.32:amd64 (5.32.1-4+deb11u3) ... Removing libgdbm-compat4:amd64 (1.19-2) ... Removing libgdbm6:amd64 (1.19-2) ... Removing r-cran-data.table (1.13.6+dfsg-1) ... Removing libhwloc15:amd64 (2.4.1+dfsg-1) ... Removing librdmacm1:amd64 (33.2-1) ... Removing libxml2:amd64 (2.9.10+dfsg-6.7+deb11u5) ... Removing libisl23:amd64 (0.23-1) ... Removing libitm1:amd64 (10.2.1-6) ... Removing libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) ... Removing libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Removing liblsan0:amd64 (10.2.1-6) ... Removing libltdl7:amd64 (2.4.6-15) ... Removing libmpc3:amd64 (1.2.0-1) ... Removing libmpfr6:amd64 (4.1.0-3) ... Removing libnl-route-3-dev:amd64 (3.4.0-1+b1) ... Removing libnl-3-dev:amd64 (3.4.0-1+b1) ... Removing libnsl-dev:amd64 (1.3.0-2) ... Removing libpsm2-2 (11.2.185-1) ... Removing libnuma1:amd64 (2.0.12-1+b1) ... Removing libpciaccess0:amd64 (0.16-1) ... Removing libpsm-infinipath1 (3.3+20.604758e7-6.1) ... update-alternatives: warning: alternative /usr/lib/libpsm1/libpsm_infinipath.so.1.16 (part of link group libpsm_infinipath.so.1) doesn't exist; removing from list of alternatives update-alternatives: warning: /etc/alternatives/libpsm_infinipath.so.1 is dangling; it will be updated with best choice Removing m4 (1.4.18-5) ... Removing libsigsegv2:amd64 (2.13-1) ... Removing libtirpc-dev:amd64 (1.3.1-1+deb11u1) ... Removing libtsan0:amd64 (10.2.1-6) ... Removing libubsan1:amd64 (10.2.1-6) ... Removing linux-libc-dev:amd64 (5.10.226-1) ... Removing ocl-icd-libopencl1:amd64 (2.2.14-2) ... Removing openmpi-common (4.1.0-10) ... Removing perl-modules-5.32 (5.32.1-4+deb11u3) ... Removing r-cran-desc (1.2.0-3) ... Removing r-cran-waldo (0.2.3-2) ... Removing r-cran-brio (1.1.1-1) ... Removing r-cran-callr (3.5.1-1) ... Removing r-cran-munsell (0.5.0-2) ... Removing r-cran-colorspace (2.0-0+dfsg-1) ... Removing r-cran-rematch2 (2.1.2-2) ... Removing r-cran-tibble (3.0.6+dfsg-1) ... Removing r-cran-pillar (1.4.7-1) ... Removing r-cran-diffobj (0.3.2-1) ... Removing r-cran-crayon (1.4.0-1) ... Removing r-cran-vctrs (0.3.6-1) ... Removing r-cran-digest (0.6.27-1) ... Removing r-cran-ellipsis (0.3.1-1) ... Removing r-cran-evaluate (0.14-2) ... Removing r-cran-fansi (0.4.2-1) ... Removing r-cran-farver (2.0.3-1+b1) ... Removing r-cran-lifecycle (0.2.0-2) ... Removing r-cran-gtable (0.3.0+dfsg-2) ... Removing r-cran-gtools (3.8.2-1+b1) ... Removing r-cran-jsonlite (1.7.2+dfsg-1) ... Removing r-cran-labeling (0.4.2-1) ... Removing r-cran-nlme (3.1.152-1) ... Removing r-cran-lattice (0.20-41-1+b1) ... Removing r-cran-magrittr (2.0.1-1) ... Removing r-cran-mass (7.3-53.1-1) ... Removing r-cran-pkgconfig (2.0.3-2) ... Removing r-cran-praise (1.0.0-4) ... Removing r-cran-prettyunits (1.1.1-2) ... Removing r-cran-processx (3.4.5-1) ... Removing r-cran-ps (1.5.0-1) ... Removing r-cran-r6 (2.5.0-1) ... Removing r-cran-rlang (0.4.10-1) ... Removing r-cran-rprojroot (2.0.2-1) ... Removing r-cran-rstudioapi (0.13-1) ... Removing r-cran-utf8 (1.1.4-2) ... Removing r-cran-viridislite (0.3.0-4) ... Removing ibverbs-providers:amd64 (33.2-1) ... Removing libevent-core-2.1-7:amd64 (2.1.12-stable-1) ... Removing libibverbs1:amd64 (33.2-1) ... Removing libnl-route-3-200:amd64 (3.4.0-1+b1) ... Removing libnl-3-200:amd64 (3.4.0-1+b1) ... Removing r-cran-cli (2.3.0-1) ... Removing r-cran-assertthat (0.2.1-2) ... Removing r-cran-glue (1.4.2-1) ... Removing r-base-core (4.0.4-1) ... Removing ca-certificates (20210119) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libpangocairo-1.0-0:amd64 (1.46.2-3) ... Removing libpangoft2-1.0-0:amd64 (1.46.2-3) ... Removing libpango-1.0-0:amd64 (1.46.2-3) ... Removing fontconfig (2.13.1-4.2) ... Removing libtk8.6:amd64 (8.6.11-2) ... Removing libxft2:amd64 (2.3.2-2) ... Removing libcairo2:amd64 (1.16.0-5) ... Removing libfontconfig1:amd64 (2.13.1-4.2) ... Removing fontconfig-config (2.13.1-4.2) ... Removing fonts-dejavu-core (2.37-2) ... Removing liblapack3:amd64 (3.9.0-3+deb11u1) ... Removing libblas3:amd64 (3.9.0-3+deb11u1) ... Removing libcurl4:amd64 (7.74.0-1.3+deb11u13) ... Removing libharfbuzz0b:amd64 (2.7.4-1) ... Removing libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Removing libbrotli1:amd64 (1.0.9-2+b2) ... Removing libxt6:amd64 (1:1.2.0-1) ... Removing libxcb-shm0:amd64 (1.14-3) ... Removing libsm6:amd64 (2:1.2.3-1) ... Removing libice6:amd64 (2:1.0.10-1) ... Removing libthai0:amd64 (0.1.28-3) ... Removing libdatrie1:amd64 (0.2.13-1) ... Removing libtiff5:amd64 (4.2.0-1+deb11u5) ... Removing libdeflate0:amd64 (1.7-1) ... Removing libexpat1:amd64 (2.2.10-2+deb11u6) ... Removing libfribidi0:amd64 (1.0.8-2+deb11u1) ... Removing libgfortran5:amd64 (10.2.1-6) ... Removing libglib2.0-0:amd64 (2.66.8-1+deb11u4) ... Removing libgomp1:amd64 (10.2.1-6) ... Removing libgraphite2-3:amd64 (1.3.14-1) ... Removing libicu67:amd64 (67.1-7) ... Removing libjbig0:amd64 (2.1-3.1+b2) ... Removing libjpeg62-turbo:amd64 (1:2.0.6-4) ... Removing libldap-2.4-2:amd64 (2.4.57+dfsg-3+deb11u1) ... Removing libnghttp2-14:amd64 (1.43.0-1+deb11u2) ... Removing libpaper-utils (1.1.28+b1) ... Removing libpaper1:amd64 (1.1.28+b1) ... Removing libpixman-1-0:amd64 (0.40.0-1.1~deb11u1) ... Removing libpng16-16:amd64 (1.6.37-3) ... Removing libpsl5:amd64 (0.21.0-1.2) ... Removing libquadmath0:amd64 (10.2.1-6) ... Removing libreadline8:amd64 (8.1-1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Removing libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Removing libssh2-1:amd64 (1.9.0-2+deb11u1) ... Removing libtcl8.6:amd64 (8.6.11+dfsg-1) ... Removing libthai-data (0.1.28-3) ... Removing libwebp6:amd64 (0.6.1-2.1+deb11u2) ... Removing libxcb-render0:amd64 (1.14-3) ... Removing libxss1:amd64 (1:1.2.3-1) ... Removing libxext6:amd64 (2:1.3.3-1.1) ... Removing libxrender1:amd64 (1:0.9.10-1) ... Removing openssl (1.1.1w-0+deb11u1) ... Removing readline-common (8.1-1) ... Removing ucf (3.0043) ... Removing sensible-utils (0.0.14) ... Removing unzip (6.0-26+deb11u1) ... Removing x11-common (1:7.7+22) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing xdg-utils (1.1.3-4.1) ... Removing zip (3.0-12) ... Removing libx11-6:amd64 (2:1.7.2-1+deb11u2) ... Removing libxcb1:amd64 (1.14-3) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.11.3-1+deb11u1) ... Removing libmd0:amd64 (1.0.3-3) ... Removing libx11-data (2:1.7.2-1+deb11u2) ... Removing libxau6:amd64 (1:1.0.9-1) ... Processing triggers for libc-bin (2.31-13+deb11u11) ... 0m37.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', 'remove', 'autoconf', 'automake', 'autotools-dev', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'ca-certificates', 'cpp-10', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'gcc-10', 'gfortran-10', 'ibverbs-providers:amd64', 'libasan6:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcbor0:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libedit2:amd64', 'libevent-2.1-7:amd64', 'libevent-core-2.1-7:amd64', 'libevent-dev', 'libevent-extra-2.1-7:amd64', 'libevent-openssl-2.1-7:amd64', 'libevent-pthreads-2.1-7:amd64', 'libexpat1:amd64', 'libfabric1', 'libfido2-1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-10-dev:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran-10-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libharfbuzz0b:amd64', 'libhwloc-dev:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibverbs-dev:amd64', 'libibverbs1:amd64', 'libice6:amd64', 'libicu67:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmd0:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-3-dev:amd64', 'libnl-route-3-200:amd64', 'libnl-route-3-dev:amd64', 'libnsl-dev:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev:amd64', 'libopenmpi3:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpciaccess0:amd64', 'libperl5.32:amd64', 'libpixman-1-0:amd64', 'libpmix-dev:amd64', 'libpmix2:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libquadmath0:amd64', 'librdmacm1:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsigsegv2:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtirpc-dev:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libucx0:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxnvctrl0:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'm4', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssl', 'perl', 'perl-modules-5.32', 'r-base-core', 'r-cran-assertthat', 'r-cran-brio', 'r-cran-callr', 'r-cran-cli', 'r-cran-colorspace', 'r-cran-crayon', 'r-cran-data.table', 'r-cran-desc', 'r-cran-diffobj', 'r-cran-digest', 'r-cran-ellipsis', 'r-cran-evaluate', 'r-cran-fansi', 'r-cran-farver', 'r-cran-ggplot2', 'r-cran-glue', 'r-cran-gtable', 'r-cran-gtools', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-pillar', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgload', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-processx', 'r-cran-ps', 'r-cran-r6', 'r-cran-rcolorbrewer', 'r-cran-rematch2', 'r-cran-rlang', 'r-cran-rmpi', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-testthat', 'r-cran-tibble', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-waldo', 'r-cran-withr', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'zlib1g-dev:amd64', 'r-cran-metamix'] 0m37.9s INFO: Running scripts post_remove 0m37.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_remove_exceptions'] 0m37.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_remove_exceptions'] 0m37.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg', '--purge', 'autoconf', 'automake', 'autotools-dev', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'ca-certificates', 'cpp-10', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'gcc-10', 'gfortran-10', 'ibverbs-providers:amd64', 'libasan6:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcbor0:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libedit2:amd64', 'libevent-2.1-7:amd64', 'libevent-core-2.1-7:amd64', 'libevent-dev', 'libevent-extra-2.1-7:amd64', 'libevent-openssl-2.1-7:amd64', 'libevent-pthreads-2.1-7:amd64', 'libexpat1:amd64', 'libfabric1', 'libfido2-1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-10-dev:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran-10-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libharfbuzz0b:amd64', 'libhwloc-dev:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibverbs-dev:amd64', 'libibverbs1:amd64', 'libice6:amd64', 'libicu67:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmd0:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-3-dev:amd64', 'libnl-route-3-200:amd64', 'libnl-route-3-dev:amd64', 'libnsl-dev:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev:amd64', 'libopenmpi3:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpciaccess0:amd64', 'libperl5.32:amd64', 'libpixman-1-0:amd64', 'libpmix-dev:amd64', 'libpmix2:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libquadmath0:amd64', 'librdmacm1:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsigsegv2:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtirpc-dev:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libucx0:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxnvctrl0:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'm4', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssl', 'perl', 'perl-modules-5.32', 'r-base-core', 'r-cran-assertthat', 'r-cran-brio', 'r-cran-callr', 'r-cran-cli', 'r-cran-colorspace', 'r-cran-crayon', 'r-cran-data.table', 'r-cran-desc', 'r-cran-diffobj', 'r-cran-digest', 'r-cran-ellipsis', 'r-cran-evaluate', 'r-cran-fansi', 'r-cran-farver', 'r-cran-ggplot2', 'r-cran-glue', 'r-cran-gtable', 'r-cran-gtools', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-pillar', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgload', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-processx', 'r-cran-ps', 'r-cran-r6', 'r-cran-rcolorbrewer', 'r-cran-rematch2', 'r-cran-rlang', 'r-cran-rmpi', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-testthat', 'r-cran-tibble', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-waldo', 'r-cran-withr', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'zlib1g-dev:amd64'] 0m38.5s DUMP: (Reading database ... 6756 files and directories currently installed.) Purging configuration files for autoconf (2.69-14) ... dpkg: warning: ignoring request to remove automake which isn't installed dpkg: warning: ignoring request to remove autotools-dev which isn't installed dpkg: warning: ignoring request to remove binutils which isn't installed dpkg: warning: ignoring request to remove binutils-common which isn't installed dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed Purging configuration files for ca-certificates (20210119) ... Removing dangling symlinks from /etc/ssl/certs... done. dpkg: warning: ignoring request to remove cpp-10 which isn't installed Purging configuration files for fontconfig (2.13.1-4.2) ... Purging configuration files for fontconfig-config (2.13.1-4.2) ... Purging configuration files for fonts-dejavu-core (2.37-2) ... dpkg: warning: while removing fonts-dejavu-core, directory '/usr/share/fonts/truetype/dejavu' not empty so not removed dpkg: warning: ignoring request to remove gcc-10 which isn't installed dpkg: warning: ignoring request to remove gfortran-10 which isn't installed Purging configuration files for ibverbs-providers:amd64 (33.2-1) ... dpkg: warning: ignoring request to remove libasan6 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libbinutils which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcbor0 which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed dpkg: warning: ignoring request to remove libcrypt-dev which isn't installed dpkg: warning: ignoring request to remove libctf-nobfd0 which isn't installed dpkg: warning: ignoring request to remove libctf0 which isn't installed dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libevent-2.1-7 which isn't installed dpkg: warning: ignoring request to remove libevent-core-2.1-7 which isn't installed dpkg: warning: ignoring request to remove libevent-dev which isn't installed dpkg: warning: ignoring request to remove libevent-extra-2.1-7 which isn't installed dpkg: warning: ignoring request to remove libevent-openssl-2.1-7 which isn't installed dpkg: warning: ignoring request to remove libevent-pthreads-2.1-7 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfabric1 which isn't installed dpkg: warning: ignoring request to remove libfido2-1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libgcc-10-dev which isn't installed dpkg: warning: ignoring request to remove libgdbm-compat4 which isn't installed dpkg: warning: ignoring request to remove libgdbm6 which isn't installed dpkg: warning: ignoring request to remove libgfortran-10-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.66.8-1+deb11u4) ... dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libhwloc-dev which isn't installed dpkg: warning: ignoring request to remove libhwloc-plugins which isn't installed dpkg: warning: ignoring request to remove libhwloc15 which isn't installed dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed dpkg: warning: ignoring request to remove libibverbs1 which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu67 which isn't installed dpkg: warning: ignoring request to remove libisl23 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed Purging configuration files for libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Purging configuration files for libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) ... dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libldap-2.4-2 which isn't installed dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove libltdl-dev which isn't installed dpkg: warning: ignoring request to remove libltdl7 which isn't installed dpkg: warning: ignoring request to remove libmd0 which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpfr6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed Purging configuration files for libnl-3-200:amd64 (3.4.0-1+b1) ... dpkg: warning: ignoring request to remove libnl-3-dev which isn't installed dpkg: warning: ignoring request to remove libnl-route-3-200 which isn't installed dpkg: warning: ignoring request to remove libnl-route-3-dev which isn't installed dpkg: warning: ignoring request to remove libnsl-dev which isn't installed dpkg: warning: ignoring request to remove libnuma-dev which isn't installed dpkg: warning: ignoring request to remove libnuma1 which isn't installed Purging configuration files for libopenmpi-dev:amd64 (4.1.0-10) ... dpkg: warning: ignoring request to remove libopenmpi3 which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpaper-utils which isn't installed Purging configuration files for libpaper1:amd64 (1.1.28+b1) ... dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libperl5.32 which isn't installed dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpmix-dev which isn't installed dpkg: warning: ignoring request to remove libpmix2 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed Purging configuration files for libpsm-infinipath1 (3.3+20.604758e7-6.1) ... dpkg: warning: ignoring request to remove libpsm2-2 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove librdmacm1 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsigsegv2 which isn't installed dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtiff5 which isn't installed dpkg: warning: ignoring request to remove libtirpc-dev which isn't installed dpkg: warning: ignoring request to remove libtk8.6 which isn't installed dpkg: warning: ignoring request to remove libtsan0 which isn't installed dpkg: warning: ignoring request to remove libubsan1 which isn't installed dpkg: warning: ignoring request to remove libucx0 which isn't installed dpkg: warning: ignoring request to remove libwebp6 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxnvctrl0 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxss1 which isn't installed dpkg: warning: ignoring request to remove libxt6 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed dpkg: warning: ignoring request to remove m4 which isn't installed dpkg: warning: ignoring request to remove mpi-default-bin which isn't installed dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which isn't installed Purging configuration files for openmpi-bin (4.1.0-10) ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed Purging configuration files for openssh-client (1:8.4p1-5+deb11u3) ... dpkg: warning: while removing openssh-client, directory '/usr/lib/systemd' not empty so not removed Purging configuration files for openssl (1.1.1w-0+deb11u1) ... Purging configuration files for perl (5.32.1-4+deb11u3) ... dpkg: warning: ignoring request to remove perl-modules-5.32 which isn't installed Purging configuration files for r-base-core (4.0.4-1) ... dpkg: warning: ignoring request to remove r-cran-assertthat which isn't installed dpkg: warning: ignoring request to remove r-cran-brio which isn't installed dpkg: warning: ignoring request to remove r-cran-callr which isn't installed dpkg: warning: ignoring request to remove r-cran-cli which isn't installed dpkg: warning: ignoring request to remove r-cran-colorspace which isn't installed dpkg: warning: ignoring request to remove r-cran-crayon which isn't installed dpkg: warning: ignoring request to remove r-cran-data.table which isn't installed dpkg: warning: ignoring request to remove r-cran-desc which isn't installed dpkg: warning: ignoring request to remove r-cran-diffobj which isn't installed dpkg: warning: ignoring request to remove r-cran-digest which isn't installed dpkg: warning: ignoring request to remove r-cran-ellipsis which isn't installed dpkg: warning: ignoring request to remove r-cran-evaluate which isn't installed dpkg: warning: ignoring request to remove r-cran-fansi which isn't installed dpkg: warning: ignoring request to remove r-cran-farver which isn't installed dpkg: warning: ignoring request to remove r-cran-ggplot2 which isn't installed dpkg: warning: ignoring request to remove r-cran-glue which isn't installed dpkg: warning: ignoring request to remove r-cran-gtable which isn't installed dpkg: warning: ignoring request to remove r-cran-gtools which isn't installed dpkg: warning: ignoring request to remove r-cran-isoband which isn't installed dpkg: warning: ignoring request to remove r-cran-jsonlite which isn't installed dpkg: warning: ignoring request to remove r-cran-labeling which isn't installed dpkg: warning: ignoring request to remove r-cran-lattice which isn't installed dpkg: warning: ignoring request to remove r-cran-lifecycle which isn't installed dpkg: warning: ignoring request to remove r-cran-magrittr which isn't installed dpkg: warning: ignoring request to remove r-cran-mass which isn't installed dpkg: warning: ignoring request to remove r-cran-matrix which isn't installed dpkg: warning: ignoring request to remove r-cran-mgcv which isn't installed dpkg: warning: ignoring request to remove r-cran-munsell which isn't installed dpkg: warning: ignoring request to remove r-cran-nlme which isn't installed dpkg: warning: ignoring request to remove r-cran-pillar which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgbuild which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgconfig which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgload which isn't installed dpkg: warning: ignoring request to remove r-cran-praise which isn't installed dpkg: warning: ignoring request to remove r-cran-prettyunits which isn't installed dpkg: warning: ignoring request to remove r-cran-processx which isn't installed dpkg: warning: ignoring request to remove r-cran-ps which isn't installed dpkg: warning: ignoring request to remove r-cran-r6 which isn't installed dpkg: warning: ignoring request to remove r-cran-rcolorbrewer which isn't installed dpkg: warning: ignoring request to remove r-cran-rematch2 which isn't installed dpkg: warning: ignoring request to remove r-cran-rlang which isn't installed dpkg: warning: ignoring request to remove r-cran-rmpi which isn't installed dpkg: warning: ignoring request to remove r-cran-rprojroot which isn't installed dpkg: warning: ignoring request to remove r-cran-rstudioapi which isn't installed dpkg: warning: ignoring request to remove r-cran-scales which isn't installed dpkg: warning: ignoring request to remove r-cran-testthat which isn't installed dpkg: warning: ignoring request to remove r-cran-tibble which isn't installed dpkg: warning: ignoring request to remove r-cran-utf8 which isn't installed dpkg: warning: ignoring request to remove r-cran-vctrs which isn't installed dpkg: warning: ignoring request to remove r-cran-viridislite which isn't installed dpkg: warning: ignoring request to remove r-cran-waldo which isn't installed dpkg: warning: ignoring request to remove r-cran-withr which isn't installed Purging configuration files for readline-common (8.1-1) ... dpkg: warning: ignoring request to remove sensible-utils which isn't installed Purging configuration files for ucf (3.0043) ... Purging configuration files for unzip (6.0-26+deb11u1) ... Purging configuration files for x11-common (1:7.7+22) ... dpkg: warning: ignoring request to remove xdg-utils which isn't installed dpkg: warning: ignoring request to remove zip which isn't installed dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg', '--purge', 'autoconf', 'automake', 'autotools-dev', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'ca-certificates', 'cpp-10', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'gcc-10', 'gfortran-10', 'ibverbs-providers:amd64', 'libasan6:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcbor0:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libedit2:amd64', 'libevent-2.1-7:amd64', 'libevent-core-2.1-7:amd64', 'libevent-dev', 'libevent-extra-2.1-7:amd64', 'libevent-openssl-2.1-7:amd64', 'libevent-pthreads-2.1-7:amd64', 'libexpat1:amd64', 'libfabric1', 'libfido2-1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-10-dev:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran-10-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libharfbuzz0b:amd64', 'libhwloc-dev:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibverbs-dev:amd64', 'libibverbs1:amd64', 'libice6:amd64', 'libicu67:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmd0:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-3-dev:amd64', 'libnl-route-3-200:amd64', 'libnl-route-3-dev:amd64', 'libnsl-dev:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev:amd64', 'libopenmpi3:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpciaccess0:amd64', 'libperl5.32:amd64', 'libpixman-1-0:amd64', 'libpmix-dev:amd64', 'libpmix2:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libquadmath0:amd64', 'librdmacm1:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsigsegv2:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtirpc-dev:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libucx0:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxnvctrl0:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'm4', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssl', 'perl', 'perl-modules-5.32', 'r-base-core', 'r-cran-assertthat', 'r-cran-brio', 'r-cran-callr', 'r-cran-cli', 'r-cran-colorspace', 'r-cran-crayon', 'r-cran-data.table', 'r-cran-desc', 'r-cran-diffobj', 'r-cran-digest', 'r-cran-ellipsis', 'r-cran-evaluate', 'r-cran-fansi', 'r-cran-farver', 'r-cran-ggplot2', 'r-cran-glue', 'r-cran-gtable', 'r-cran-gtools', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-pillar', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgload', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-processx', 'r-cran-ps', 'r-cran-r6', 'r-cran-rcolorbrewer', 'r-cran-rematch2', 'r-cran-rlang', 'r-cran-rmpi', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-testthat', 'r-cran-tibble', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-waldo', 'r-cran-withr', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'zlib1g-dev:amd64'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg', '--purge', 'r-cran-metamix'] 0m38.5s DUMP: dpkg: warning: ignoring request to remove r-cran-metamix which isn't installed 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg', '--purge', 'r-cran-metamix'] 0m38.5s INFO: Running scripts post_purge 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_purge_exceptions'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_purge_exceptions'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg', '--purge', '--pending'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg', '--purge', '--pending'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg', '--remove', '--pending'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg', '--remove', '--pending'] 0m38.5s INFO: Running scripts post_test 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_test_exceptions'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'tmp/scripts/post_test_exceptions'] 0m38.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m38.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m38.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg-divert', '--list'] 0m38.7s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m38.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'dpkg-divert', '--list'] 0m38.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', 'clean'] 0m38.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpws40x3j9', 'apt-get', 'clean'] 0m38.8s DEBUG: Recording chroot state 0m39.1s INFO: Warning: Package purging left files on system: /usr/local/share/fonts/ not owned /usr/local/share/fonts/.uuid not owned /usr/share/fonts/ owned by: fonts-dejavu-core /usr/share/fonts/.uuid not owned /usr/share/fonts/truetype/ owned by: fonts-dejavu-core /usr/share/fonts/truetype/.uuid not owned /usr/share/fonts/truetype/dejavu/ owned by: fonts-dejavu-core /usr/share/fonts/truetype/dejavu/.uuid not owned 0m39.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/shm'] 0m39.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/shm'] 0m39.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/console'] 0m39.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/console'] 0m39.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/ptmx'] 0m39.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/ptmx'] 0m39.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/pts'] 0m39.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/dev/pts'] 0m39.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/proc'] 0m39.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpws40x3j9/proc'] 0m39.4s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m39.5s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpws40x3j9'] 0m39.5s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpws40x3j9 0m39.5s INFO: PASS: Upgrading between Debian distributions. 0m39.5s INFO: PASS: All tests. 0m39.5s INFO: piuparts run ends. ret=0 End: 2024-10-09 17:12:35 GMT