Start: 2024-01-30 18:49:26 GMT [bullseye] Package: tnseq-transit Version: 3.2.1-1 Installed-Size: 76920 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: transit Provides: transit Depends: python3-matplotlib, python3-numpy, python3-pil, python3-pkg-resources, python3-scipy, python3-statsmodels, python3:any, python3-pubsub, python3-wxgtk4.0, bwa Breaks: transit Description: statistical calculations of essentiality of genes or genomic regions Homepage: http://saclab.tamu.edu/essentiality/transit/ Description-md5: ed6ccc42fdb3924f7848894e28b09ade Section: science Priority: optional Filename: pool/main/t/tnseq-transit/tnseq-transit_3.2.1-1_amd64.deb Size: 8954788 MD5sum: 7588d7d366faa6da023ff66e0e436665 SHA256: 3bf5d90afbd40e1f6f7633ad4c051b799390b0668dedb524237dede6731c043e [bullseye-next] Package: tnseq-transit Version: 3.2.1-1 Installed-Size: 76920 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: transit Provides: transit Depends: python3-matplotlib, python3-numpy, python3-pil, python3-pkg-resources, python3-scipy, python3-statsmodels, python3:any, python3-pubsub, python3-wxgtk4.0, bwa Breaks: transit Description: statistical calculations of essentiality of genes or genomic regions Homepage: http://saclab.tamu.edu/essentiality/transit/ Description-md5: ed6ccc42fdb3924f7848894e28b09ade Section: science Priority: optional Filename: pool/main/t/tnseq-transit/tnseq-transit_3.2.1-1_amd64.deb Size: 8954788 MD5sum: 7588d7d366faa6da023ff66e0e436665 SHA256: 3bf5d90afbd40e1f6f7633ad4c051b799390b0668dedb524237dede6731c043e Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d bullseye -d bullseye-next -B /srv/piuparts.debian.org/slave/refchroot/bullseye2next/reference-chroot-metadata.dat --apt tnseq-transit=3.2.1-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.2 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d bullseye -d bullseye-next -B /srv/piuparts.debian.org/slave/refchroot/bullseye2next/reference-chroot-metadata.dat --apt tnseq-transit=3.2.1-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-27-amd64 #1 SMP Debian 5.10.205-2 (2023-12-31) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpc01ewnr4 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpc01ewnr4 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m2.1s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m2.1s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/proc'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/proc'] 0m2.1s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/pts'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/pts'] 0m2.1s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/ptmx'] 0m2.1s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/ptmx'] 0m2.1s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/console'] 0m2.1s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/console'] 0m2.1s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/shm'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/shm'] 0m2.1s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m2.1s DEBUG: Created policy-rc.d and chmodded it. 0m2.1s DEBUG: Created resolv.conf. 0m2.1s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpc01ewnr4/tmp/scripts/ 0m2.1s INFO: Running scripts post_chroot_unpack 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', 'update'] 0m3.3s DUMP: Hit:1 http://deb.debian.org/debian bullseye InRelease Reading package lists... 0m3.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', 'update'] 0m3.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-yf', 'dist-upgrade'] 0m3.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-yf', 'dist-upgrade'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.1s DUMP: cd994be14815166bf41ad7cebd6f56fc - 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.1s INFO: Running scripts post_setup 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_dummy_users'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_dummy_users'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_forbid_home'] 0m6.0s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_forbid_home'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.0s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_minimize'] 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_minimize'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_zz_backports'] 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_setup_zz_backports'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.0s DUMP: install ok installed adduser adduser 3.118+deb11u1 install ok installed apt apt 2.2.4 install ok installed base-files base-files 11.1+deb11u8 install ok installed base-passwd base-passwd 3.5.51 install ok installed bash bash 5.1-2+deb11u1 install ok installed bsdutils bsdutils 1:2.36.1-8+deb11u1 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-5 install ok installed debconf debconf 1.5.77 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1+deb11u1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-5 install ok installed dpkg dpkg 1.20.13 install ok installed e2fsprogs e2fsprogs 1.46.2-2 install ok installed findutils findutils 4.8.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-22 install ok installed gpgv gpgv 2.2.27-2+deb11u2 install ok installed grep grep 3.6-1+deb11u1 install ok installed gzip gzip 1.10-4+deb11u1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.60 install ok installed libacl1:amd64 libacl1 2.2.53-10 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.2.4 install ok installed libattr1:amd64 libattr1 1:2.4.48-6 install ok installed libaudit-common libaudit-common 1:3.0-2 install ok installed libaudit1:amd64 libaudit1 1:3.0-2 install ok installed libblkid1:amd64 libblkid1 2.36.1-8+deb11u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-13+deb11u6 install ok installed libc6:amd64 libc6 2.31-13+deb11u6 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcom-err2:amd64 libcom-err2 1.46.2-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.18-4 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.8 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.260 install ok installed libext2fs2:amd64 libext2fs2 1.46.2-2 install ok installed libffi7:amd64 libffi7 3.3-6 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.1-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-6 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1+deb11u1 install ok installed libgnutls30:amd64 libgnutls30 3.7.1-5+deb11u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-6+deb11u4 install ok installed libhogweed6:amd64 libhogweed6 3.7.3-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-5 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-6+deb11u4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-6+deb11u4 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-6+deb11u4 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1~deb11u1 install ok installed libmount1:amd64 libmount1 2.36.1-8+deb11u1 install ok installed libnettle8:amd64 libnettle8 3.7.3-1 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.22-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-9+deb11u1 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-9+deb11u1 install ok installed libpam-runtime libpam-runtime 1.4.0-9+deb11u1 install ok installed libpam0g:amd64 libpam0g 1.4.0-9+deb11u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.36-2+deb11u1 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.5.1-1+deb11u1 install ok installed libselinux1:amd64 libselinux1 3.1-3 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b2 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-8+deb11u1 install ok installed libss2:amd64 libss2 1.46.2-2 install ok installed libssl1.1:amd64 libssl1.1 1.1.1w-0+deb11u1 install ok installed libstdc++6:amd64 libstdc++6 10.2.1-6 install ok installed libsystemd0:amd64 libsystemd0 247.3-7+deb11u4 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2+deb11u1 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-2+deb11u2 install ok installed libtirpc-common libtirpc-common 1.3.1-1+deb11u1 install ok installed libtirpc3:amd64 libtirpc3 1.3.1-1+deb11u1 install ok installed libudev1:amd64 libudev1 247.3-7+deb11u4 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-8+deb11u1 install ok installed libxxhash0:amd64 libxxhash0 0.8.0-2 install ok installed libzstd1:amd64 libzstd1 1.4.8+dfsg-2.1 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.46.2-2 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36.1-8+deb11u1 install ok installed ncurses-base ncurses-base 6.2+20201114-2+deb11u2 install ok installed ncurses-bin ncurses-bin 6.2+20201114-2+deb11u2 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.32.1-4+deb11u2 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-7+deb11u1 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2021a-1+deb11u10 install ok installed util-linux util-linux 2.36.1-8+deb11u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2+deb11u2 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.0s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/bullseye2next/reference-chroot-metadata.dat 0m6.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 0m6.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 0m6.5s INFO: Running scripts is_testable 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/is_testable_uninstallable'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/is_testable_uninstallable'] 0m6.5s INFO: Running scripts pre_test 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_test_exceptions'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_test_exceptions'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_test_root_password'] 0m6.6s DUMP: New password: Retype new password: passwd: password updated successfully 0m6.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_test_root_password'] 0m6.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'show', '--no-all-versions', 'tnseq-transit'] 0m7.0s DUMP: Package: tnseq-transit Version: 3.2.1-1 Installed-Size: 76920 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: transit Provides: transit Depends: python3-matplotlib, python3-numpy, python3-pil, python3-pkg-resources, python3-scipy, python3-statsmodels, python3:any, python3-pubsub, python3-wxgtk4.0, bwa Breaks: transit Description-en: statistical calculations of essentiality of genes or genomic regions This is a software that can be used to analyze Tn-Seq datasets. It includes various statistical calculations of essentiality of genes or genomic regions (including conditional essentiality between 2 conditions). These methods were developed and tested as a collaboration between the Sassetti lab (UMass) and the Ioerger lab (Texas A&M) . TRANSIT is capable of analyzing TnSeq libraries constructed with Himar1 or Tn5 datasets. . TRANSIT assumes you have already done pre-processing of raw sequencing files (.fastq) and extracted read counts into a .wig formatted file. The .wig file should contain the counts at all sites where an insertion could take place (including sites with no reads). For Himar1 datasets this is all TA sites in the genome. For Tn5 datasets this would be all nucleotides in the genome. Description-md5: ed6ccc42fdb3924f7848894e28b09ade Homepage: http://saclab.tamu.edu/essentiality/transit/ Section: science Priority: optional Filename: pool/main/t/tnseq-transit/tnseq-transit_3.2.1-1_amd64.deb Size: 8954788 MD5sum: 7588d7d366faa6da023ff66e0e436665 SHA256: 3bf5d90afbd40e1f6f7633ad4c051b799390b0668dedb524237dede6731c043e 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'show', '--no-all-versions', 'tnseq-transit'] 0m7.0s INFO: apt-cache knows about the following packages: tnseq-transit 0m7.0s INFO: Running scripts pre_install 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_database-server'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_database-server'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_exceptions'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_exceptions'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_extras'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_extras'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy'] 0m7.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release v=11.8,o=Debian,a=oldstable,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy', 'tnseq-transit'] 0m7.1s DUMP: tnseq-transit: Installed: (none) Candidate: 3.2.1-1 Version table: 3.2.1-1 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy', 'tnseq-transit'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-y', 'install', 'tnseq-transit'] 1m7.0s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: adwaita-icon-theme bwa dbus dbus-user-session dconf-gsettings-backend dconf-service dmsetup fontconfig fontconfig-config fonts-lyx glib-networking glib-networking-common glib-networking-services gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme libapparmor1 libargon2-1 libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libbrotli1 libbsd0 libcairo-gobject2 libcairo2 libcap2 libcolord2 libcryptsetup12 libcups2 libdatrie1 libdbus-1-3 libdconf1 libdeflate0 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libepoxy0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgdbm-compat4 libgdbm6 libgdk-pixbuf-2.0-0 libgdk-pixbuf-xlib-2.0-0 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0 libgtk-3-common libharfbuzz0b libice6 libicu67 libimagequant0 libip4tc2 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libjson-c5 libjson-glib-1.0-0 libjson-glib-1.0-common libkmod2 liblapack3 liblbfgsb0 liblcms2-2 libllvm11 libmd0 libmpdec3 libncursesw6 libnotify4 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libperl5.32 libpixman-1-0 libpng16-16 libproxy1v5 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 librest-0.7-0 libsensors-config libsensors5 libsm6 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-0 libthai-data libthai0 libtiff5 libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwebpdemux2 libwebpmux3 libwxbase3.0-0v5 libwxgtk3.0-gtk3-0v5 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxrandr2 libxrender1 libxshmfence1 libxxf86vm1 libz3-4 mailcap media-types mime-support perl perl-modules-5.32 python-matplotlib-data python3 python3-cycler python3-dateutil python3-decorator python3-kiwisolver python3-matplotlib python3-minimal python3-numpy python3-pandas python3-pandas-lib python3-patsy python3-pil python3-pkg-resources python3-pubsub python3-pyparsing python3-scipy python3-six python3-statsmodels python3-statsmodels-lib python3-tz python3-wxgtk4.0 python3.9 python3.9-minimal readline-common sensible-utils shared-mime-info systemd systemd-sysv ttf-bitstream-vera ucf x11-common xkb-data Suggested packages: samtools colord cups-common gdbm-l10n gvfs libjs-jquery-ui-docs liblcms2-utils pciutils lm-sensors perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make libtap-harness-archive-perl python3-doc python3-tk python3-venv python-cycler-doc dvipng ffmpeg ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-nose python3-pyqt5 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra ttf-staypuft gcc gfortran python-numpy-doc python3-dev python3-numpy-dbg python3-pytest python-pandas-doc python-patsy-doc python-pil-doc python3-pil-dbg python3-setuptools python-pyparsing-doc python-scipy-doc python-statsmodels-doc wx3.0-doc python3.9-venv python3.9-doc binutils binfmt-support readline-doc systemd-container policykit-1 Recommended packages: librsvg2-common at-spi2-core libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs libgtk-3-bin javascript-common libgpm2 notification-daemon publicsuffix ca-certificates mesa-vulkan-drivers | vulkan-icd bzip2 file xz-utils netbase python3-tk python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-xlwt python3-bs4 python3-html5lib python3-lxml python3-tables python3-jinja2 python3-numba python3-olefile g++ | c++-compiler python3-joblib python3-colorama python3-cvxopt systemd-timesyncd | time-daemon libnss-systemd The following NEW packages will be installed: adwaita-icon-theme bwa dbus dbus-user-session dconf-gsettings-backend dconf-service dmsetup fontconfig fontconfig-config fonts-lyx glib-networking glib-networking-common glib-networking-services gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme libapparmor1 libargon2-1 libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libbrotli1 libbsd0 libcairo-gobject2 libcairo2 libcap2 libcolord2 libcryptsetup12 libcups2 libdatrie1 libdbus-1-3 libdconf1 libdeflate0 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libepoxy0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgdbm-compat4 libgdbm6 libgdk-pixbuf-2.0-0 libgdk-pixbuf-xlib-2.0-0 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0 libgtk-3-common libharfbuzz0b libice6 libicu67 libimagequant0 libip4tc2 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libjson-c5 libjson-glib-1.0-0 libjson-glib-1.0-common libkmod2 liblapack3 liblbfgsb0 liblcms2-2 libllvm11 libmd0 libmpdec3 libncursesw6 libnotify4 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libperl5.32 libpixman-1-0 libpng16-16 libproxy1v5 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 librest-0.7-0 libsensors-config libsensors5 libsm6 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-0 libthai-data libthai0 libtiff5 libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwebpdemux2 libwebpmux3 libwxbase3.0-0v5 libwxgtk3.0-gtk3-0v5 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxrandr2 libxrender1 libxshmfence1 libxxf86vm1 libz3-4 mailcap media-types mime-support perl perl-modules-5.32 python-matplotlib-data python3 python3-cycler python3-dateutil python3-decorator python3-kiwisolver python3-matplotlib python3-minimal python3-numpy python3-pandas python3-pandas-lib python3-patsy python3-pil python3-pkg-resources python3-pubsub python3-pyparsing python3-scipy python3-six python3-statsmodels python3-statsmodels-lib python3-tz python3-wxgtk4.0 python3.9 python3.9-minimal readline-common sensible-utils shared-mime-info systemd systemd-sysv tnseq-transit ttf-bitstream-vera ucf x11-common xkb-data 0 upgraded, 191 newly installed, 0 to remove and 0 not upgraded. Need to get 160 MB of archives. After this operation, 703 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 libapparmor1 amd64 2.13.6-10 [99.3 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 libcap2 amd64 1:2.44-1 [23.6 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 libargon2-1 amd64 0~20171227-0.2 [19.6 kB] Get:4 http://deb.debian.org/debian bullseye/main amd64 dmsetup amd64 2:1.02.175-2.1 [92.1 kB] Get:5 http://deb.debian.org/debian bullseye/main amd64 libdevmapper1.02.1 amd64 2:1.02.175-2.1 [143 kB] Get:6 http://deb.debian.org/debian bullseye/main amd64 libjson-c5 amd64 0.15-2+deb11u1 [42.9 kB] Get:7 http://deb.debian.org/debian bullseye/main amd64 libcryptsetup12 amd64 2:2.3.7-1+deb11u1 [248 kB] Get:8 http://deb.debian.org/debian bullseye/main amd64 libip4tc2 amd64 1.8.7-1 [34.6 kB] Get:9 http://deb.debian.org/debian bullseye/main amd64 libkmod2 amd64 28-1 [55.6 kB] Get:10 http://deb.debian.org/debian bullseye/main amd64 systemd amd64 247.3-7+deb11u4 [4502 kB] Get:11 http://deb.debian.org/debian bullseye/main amd64 systemd-sysv amd64 247.3-7+deb11u4 [114 kB] Get:12 http://deb.debian.org/debian bullseye/main amd64 libdbus-1-3 amd64 1.12.28-0+deb11u1 [223 kB] Get:13 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2+deb11u5 [98.2 kB] Get:14 http://deb.debian.org/debian bullseye/main amd64 dbus amd64 1.12.28-0+deb11u1 [244 kB] Get:15 http://deb.debian.org/debian bullseye/main amd64 perl-modules-5.32 all 5.32.1-4+deb11u2 [2823 kB] Get:16 http://deb.debian.org/debian bullseye/main amd64 libgdbm6 amd64 1.19-2 [64.9 kB] Get:17 http://deb.debian.org/debian bullseye/main amd64 libgdbm-compat4 amd64 1.19-2 [44.7 kB] Get:18 http://deb.debian.org/debian bullseye/main amd64 libperl5.32 amd64 5.32.1-4+deb11u2 [4106 kB] Get:19 http://deb.debian.org/debian bullseye/main amd64 perl amd64 5.32.1-4+deb11u2 [293 kB] Get:20 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-minimal amd64 3.9.2-1 [801 kB] Get:21 http://deb.debian.org/debian bullseye/main amd64 python3.9-minimal amd64 3.9.2-1 [1955 kB] Get:22 http://deb.debian.org/debian bullseye/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get:23 http://deb.debian.org/debian bullseye/main amd64 media-types all 4.0.0 [30.3 kB] Get:24 http://deb.debian.org/debian bullseye/main amd64 mailcap all 3.69 [31.7 kB] Get:25 http://deb.debian.org/debian bullseye/main amd64 mime-support all 3.66 [10.9 kB] Get:26 http://deb.debian.org/debian bullseye/main amd64 libmpdec3 amd64 2.5.1-1 [87.7 kB] Get:27 http://deb.debian.org/debian bullseye/main amd64 libncursesw6 amd64 6.2+20201114-2+deb11u2 [132 kB] Get:28 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get:29 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get:30 http://deb.debian.org/debian bullseye/main amd64 libsqlite3-0 amd64 3.34.1-3 [797 kB] Get:31 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-stdlib amd64 3.9.2-1 [1684 kB] Get:32 http://deb.debian.org/debian bullseye/main amd64 python3.9 amd64 3.9.2-1 [466 kB] Get:33 http://deb.debian.org/debian bullseye/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get:34 http://deb.debian.org/debian bullseye/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get:35 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get:36 http://deb.debian.org/debian bullseye/main amd64 libpam-systemd amd64 247.3-7+deb11u4 [283 kB] Get:37 http://deb.debian.org/debian bullseye/main amd64 ucf all 3.0043 [74.0 kB] Get:38 http://deb.debian.org/debian bullseye/main amd64 hicolor-icon-theme all 0.17-2 [11.4 kB] Get:39 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf2.0-common all 2.42.2+dfsg-1+deb11u1 [320 kB] Get:40 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-0 amd64 2.66.8-1 [1370 kB] Get:41 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:42 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u4 [693 kB] Get:43 http://deb.debian.org/debian bullseye/main amd64 shared-mime-info amd64 2.0-1 [701 kB] Get:44 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get:45 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get:46 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get:47 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:48 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1+deb11u2 [259 kB] Get:49 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1+deb11u4 [290 kB] Get:50 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.2+dfsg-1+deb11u1 [147 kB] Get:51 http://deb.debian.org/debian bullseye/main amd64 gtk-update-icon-cache amd64 3.24.24-4+deb11u3 [88.4 kB] Get:52 http://deb.debian.org/debian bullseye/main amd64 adwaita-icon-theme all 3.38.0-1 [10.9 MB] Get:53 http://deb.debian.org/debian bullseye/main amd64 bwa amd64 0.7.17-6+b1 [212 kB] Get:54 http://deb.debian.org/debian bullseye/main amd64 dbus-user-session amd64 1.12.28-0+deb11u1 [100 kB] Get:55 http://deb.debian.org/debian bullseye/main amd64 libdconf1 amd64 0.38.0-2 [43.5 kB] Get:56 http://deb.debian.org/debian bullseye/main amd64 dconf-service amd64 0.38.0-2 [37.4 kB] Get:57 http://deb.debian.org/debian bullseye/main amd64 dconf-gsettings-backend amd64 0.38.0-2 [30.6 kB] Get:58 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get:59 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.4+dfsg-1+deb11u1 [418 kB] Get:60 http://deb.debian.org/debian bullseye/main amd64 ttf-bitstream-vera all 1.10-8.1 [223 kB] Get:61 http://deb.debian.org/debian bullseye/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get:62 http://deb.debian.org/debian bullseye/main amd64 libfontconfig1 amd64 2.13.1-4.2 [347 kB] Get:63 http://deb.debian.org/debian bullseye/main amd64 fontconfig amd64 2.13.1-4.2 [417 kB] Get:64 http://deb.debian.org/debian bullseye/main amd64 fonts-lyx all 2.3.6-1 [205 kB] Get:65 http://deb.debian.org/debian bullseye/main amd64 libproxy1v5 amd64 0.4.17-1 [59.5 kB] Get:66 http://deb.debian.org/debian bullseye/main amd64 glib-networking-common all 2.66.0-2 [68.1 kB] Get:67 http://deb.debian.org/debian bullseye/main amd64 glib-networking-services amd64 2.66.0-2 [17.5 kB] Get:68 http://deb.debian.org/debian bullseye/main amd64 gsettings-desktop-schemas all 3.38.0-2 [588 kB] Get:69 http://deb.debian.org/debian bullseye/main amd64 glib-networking amd64 2.66.0-2 [67.6 kB] Get:70 http://deb.debian.org/debian bullseye/main amd64 libatk1.0-data all 2.36.0-2 [149 kB] Get:71 http://deb.debian.org/debian bullseye/main amd64 libatk1.0-0 amd64 2.36.0-2 [52.2 kB] Get:72 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:73 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get:74 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1+deb11u1 [108 kB] Get:75 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:76 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get:77 http://deb.debian.org/debian bullseye/main amd64 libx11-data all 2:1.7.2-1+deb11u1 [311 kB] Get:78 http://deb.debian.org/debian bullseye/main amd64 libx11-6 amd64 2:1.7.2-1+deb11u1 [772 kB] Get:79 http://deb.debian.org/debian bullseye/main amd64 libatspi2.0-0 amd64 2.38.0-4+deb11u1 [72.4 kB] Get:80 http://deb.debian.org/debian bullseye/main amd64 libatk-bridge2.0-0 amd64 2.38.0-1 [64.6 kB] Get:81 http://deb.debian.org/debian bullseye/main amd64 libavahi-common-data amd64 0.8-5+deb11u2 [124 kB] Get:82 http://deb.debian.org/debian bullseye/main amd64 libavahi-common3 amd64 0.8-5+deb11u2 [58.7 kB] Get:83 http://deb.debian.org/debian bullseye/main amd64 libavahi-client3 amd64 0.8-5+deb11u2 [62.6 kB] Get:84 http://deb.debian.org/debian bullseye/main amd64 libblas3 amd64 3.9.0-3+deb11u1 [153 kB] Get:85 http://deb.debian.org/debian bullseye/main amd64 libpixman-1-0 amd64 0.40.0-1.1~deb11u1 [543 kB] Get:86 http://deb.debian.org/debian bullseye/main amd64 libxcb-render0 amd64 1.14-3 [111 kB] Get:87 http://deb.debian.org/debian bullseye/main amd64 libxcb-shm0 amd64 1.14-3 [101 kB] Get:88 http://deb.debian.org/debian bullseye/main amd64 libxext6 amd64 2:1.3.3-1.1 [52.7 kB] Get:89 http://deb.debian.org/debian bullseye/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:90 http://deb.debian.org/debian bullseye/main amd64 libcairo2 amd64 1.16.0-5 [694 kB] Get:91 http://deb.debian.org/debian bullseye/main amd64 libcairo-gobject2 amd64 1.16.0-5 [125 kB] Get:92 http://deb.debian.org/debian bullseye/main amd64 liblcms2-2 amd64 2.12~rc1-2 [150 kB] Get:93 http://deb.debian.org/debian bullseye/main amd64 libcolord2 amd64 1.4.5-3 [144 kB] Get:94 http://deb.debian.org/debian bullseye/main amd64 libcups2 amd64 2.3.3op2-3+deb11u6 [351 kB] Get:95 http://deb.debian.org/debian bullseye/main amd64 libdatrie1 amd64 0.2.13-1 [42.7 kB] Get:96 http://deb.debian.org/debian bullseye/main amd64 libdrm-common all 2.4.104-1 [14.9 kB] Get:97 http://deb.debian.org/debian bullseye/main amd64 libdrm2 amd64 2.4.104-1 [41.5 kB] Get:98 http://deb.debian.org/debian bullseye/main amd64 libdrm-amdgpu1 amd64 2.4.104-1 [28.5 kB] Get:99 http://deb.debian.org/debian bullseye/main amd64 libpciaccess0 amd64 0.16-1 [53.6 kB] Get:100 http://deb.debian.org/debian bullseye/main amd64 libdrm-intel1 amd64 2.4.104-1 [71.8 kB] Get:101 http://deb.debian.org/debian bullseye/main amd64 libdrm-nouveau2 amd64 2.4.104-1 [26.8 kB] Get:102 http://deb.debian.org/debian bullseye/main amd64 libdrm-radeon1 amd64 2.4.104-1 [30.2 kB] Get:103 http://deb.debian.org/debian bullseye/main amd64 libedit2 amd64 3.1-20191231-2+b1 [96.7 kB] Get:104 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get:105 http://deb.debian.org/debian bullseye/main amd64 libepoxy0 amd64 1.5.5-1 [193 kB] Get:106 http://deb.debian.org/debian bullseye/main amd64 libfribidi0 amd64 1.0.8-2+deb11u1 [64.9 kB] Get:107 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf-xlib-2.0-0 amd64 2.40.2-2 [47.9 kB] Get:108 http://deb.debian.org/debian bullseye/main amd64 libgdk-pixbuf2.0-0 amd64 2.40.2-2 [14.1 kB] Get:109 http://deb.debian.org/debian bullseye/main amd64 libquadmath0 amd64 10.2.1-6 [145 kB] Get:110 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.1-6 [727 kB] Get:111 http://deb.debian.org/debian bullseye/main amd64 libglapi-mesa amd64 20.3.5-1 [71.7 kB] Get:112 http://deb.debian.org/debian bullseye/main amd64 libz3-4 amd64 4.8.10-1 [6949 kB] Get:113 http://deb.debian.org/debian bullseye/main amd64 libllvm11 amd64 1:11.0.1-2 [17.9 MB] Get:114 http://deb.debian.org/debian bullseye/main amd64 libsensors-config all 1:3.6.0-7 [32.3 kB] Get:115 http://deb.debian.org/debian bullseye/main amd64 libsensors5 amd64 1:3.6.0-7 [52.3 kB] Get:116 http://deb.debian.org/debian bullseye/main amd64 libvulkan1 amd64 1.2.162.0-1 [103 kB] Get:117 http://deb.debian.org/debian bullseye/main amd64 libgl1-mesa-dri amd64 20.3.5-1 [9633 kB] Get:118 http://deb.debian.org/debian bullseye/main amd64 libglvnd0 amd64 1.3.2-1 [53.6 kB] Get:119 http://deb.debian.org/debian bullseye/main amd64 libx11-xcb1 amd64 2:1.7.2-1+deb11u1 [203 kB] Get:120 http://deb.debian.org/debian bullseye/main amd64 libxcb-dri2-0 amd64 1.14-3 [103 kB] Get:121 http://deb.debian.org/debian bullseye/main amd64 libxcb-dri3-0 amd64 1.14-3 [102 kB] Get:122 http://deb.debian.org/debian bullseye/main amd64 libxcb-glx0 amd64 1.14-3 [118 kB] Get:123 http://deb.debian.org/debian bullseye/main amd64 libxcb-present0 amd64 1.14-3 [101 kB] Get:124 http://deb.debian.org/debian bullseye/main amd64 libxcb-sync1 amd64 1.14-3 [105 kB] Get:125 http://deb.debian.org/debian bullseye/main amd64 libxcb-xfixes0 amd64 1.14-3 [105 kB] Get:126 http://deb.debian.org/debian bullseye/main amd64 libxdamage1 amd64 1:1.1.5-2 [15.7 kB] Get:127 http://deb.debian.org/debian bullseye/main amd64 libxfixes3 amd64 1:5.0.3-2 [22.1 kB] Get:128 http://deb.debian.org/debian bullseye/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get:129 http://deb.debian.org/debian bullseye/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:130 http://deb.debian.org/debian bullseye/main amd64 libglx-mesa0 amd64 20.3.5-1 [186 kB] Get:131 http://deb.debian.org/debian bullseye/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:132 http://deb.debian.org/debian bullseye/main amd64 libharfbuzz0b amd64 2.7.4-1 [1471 kB] Get:133 http://deb.debian.org/debian bullseye/main amd64 libjson-glib-1.0-common all 1.6.2-1 [56.9 kB] Get:134 http://deb.debian.org/debian bullseye/main amd64 libjson-glib-1.0-0 amd64 1.6.2-1 [65.4 kB] Get:135 http://deb.debian.org/debian bullseye/main amd64 libthai-data all 0.1.28-3 [170 kB] Get:136 http://deb.debian.org/debian bullseye/main amd64 libthai0 amd64 0.1.28-3 [54.2 kB] Get:137 http://deb.debian.org/debian bullseye/main amd64 libpango-1.0-0 amd64 1.46.2-3 [191 kB] Get:138 http://deb.debian.org/debian bullseye/main amd64 libpangoft2-1.0-0 amd64 1.46.2-3 [62.2 kB] Get:139 http://deb.debian.org/debian bullseye/main amd64 libpangocairo-1.0-0 amd64 1.46.2-3 [50.6 kB] Get:140 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:141 http://deb.debian.org/debian bullseye/main amd64 libsoup2.4-1 amd64 2.72.0-2 [280 kB] Get:142 http://deb.debian.org/debian bullseye/main amd64 libsoup-gnome2.4-1 amd64 2.72.0-2 [22.2 kB] Get:143 http://deb.debian.org/debian bullseye/main amd64 librest-0.7-0 amd64 0.8.1-1.1 [33.8 kB] Get:144 http://deb.debian.org/debian bullseye/main amd64 libwayland-client0 amd64 1.18.0-2~exp1.1 [26.9 kB] Get:145 http://deb.debian.org/debian bullseye/main amd64 libwayland-cursor0 amd64 1.18.0-2~exp1.1 [14.6 kB] Get:146 http://deb.debian.org/debian bullseye/main amd64 libwayland-egl1 amd64 1.18.0-2~exp1.1 [8448 B] Get:147 http://deb.debian.org/debian bullseye/main amd64 libxcomposite1 amd64 1:0.4.5-1 [16.6 kB] Get:148 http://deb.debian.org/debian bullseye/main amd64 libxcursor1 amd64 1:1.2.0-2 [37.3 kB] Get:149 http://deb.debian.org/debian bullseye/main amd64 libxi6 amd64 2:1.7.10-1 [83.4 kB] Get:150 http://deb.debian.org/debian bullseye/main amd64 libxinerama1 amd64 2:1.1.4-2 [17.7 kB] Get:151 http://deb.debian.org/debian bullseye/main amd64 xkb-data all 2.29-2 [655 kB] Get:152 http://deb.debian.org/debian bullseye/main amd64 libxkbcommon0 amd64 1.0.3-2 [101 kB] Get:153 http://deb.debian.org/debian bullseye/main amd64 libxrandr2 amd64 2:1.5.1-1 [37.5 kB] Get:154 http://deb.debian.org/debian bullseye/main amd64 libgtk-3-common all 3.24.24-4+deb11u3 [3757 kB] Get:155 http://deb.debian.org/debian bullseye/main amd64 libgtk-3-0 amd64 3.24.24-4+deb11u3 [2716 kB] Get:156 http://deb.debian.org/debian bullseye/main amd64 x11-common all 1:7.7+22 [252 kB] Get:157 http://deb.debian.org/debian bullseye/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get:158 http://deb.debian.org/debian bullseye/main amd64 libimagequant0 amd64 2.12.2-1.1 [32.5 kB] Get:159 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get:160 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery-ui all 1.12.1+dfsg-8+deb11u1 [232 kB] Get:161 http://deb.debian.org/debian bullseye/main amd64 liblapack3 amd64 3.9.0-3+deb11u1 [2166 kB] Get:162 http://deb.debian.org/debian bullseye/main amd64 liblbfgsb0 amd64 3.0+dfsg.3-9 [28.5 kB] Get:163 http://deb.debian.org/debian bullseye/main amd64 libnotify4 amd64 0.7.9-3 [23.7 kB] Get:164 http://deb.debian.org/debian bullseye/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:165 http://deb.debian.org/debian bullseye/main amd64 libwebpdemux2 amd64 0.6.1-2.1+deb11u2 [87.8 kB] Get:166 http://deb.debian.org/debian bullseye/main amd64 libwebpmux3 amd64 0.6.1-2.1+deb11u2 [97.7 kB] Get:167 http://deb.debian.org/debian bullseye/main amd64 libwxbase3.0-0v5 amd64 3.0.5.1+dfsg-2 [1090 kB] Get:168 http://deb.debian.org/debian bullseye/main amd64 libglx0 amd64 1.3.2-1 [35.7 kB] Get:169 http://deb.debian.org/debian bullseye/main amd64 libgl1 amd64 1.3.2-1 [89.5 kB] Get:170 http://deb.debian.org/debian bullseye/main amd64 libwxgtk3.0-gtk3-0v5 amd64 3.0.5.1+dfsg-2 [4494 kB] Get:171 http://deb.debian.org/debian bullseye/main amd64 python-matplotlib-data all 3.3.4-1 [4153 kB] Get:172 http://deb.debian.org/debian bullseye/main amd64 python3-six all 1.16.0-2 [17.5 kB] Get:173 http://deb.debian.org/debian bullseye/main amd64 python3-cycler all 0.10.0-3 [8084 B] Get:174 http://deb.debian.org/debian bullseye/main amd64 python3-dateutil all 2.8.1-6 [79.2 kB] Get:175 http://deb.debian.org/debian bullseye/main amd64 python3-decorator all 4.4.2-2 [15.8 kB] Get:176 http://deb.debian.org/debian bullseye/main amd64 python3-kiwisolver amd64 1.3.1-1+b1 [55.7 kB] Get:177 http://deb.debian.org/debian bullseye/main amd64 python3-pyparsing all 2.4.7-1 [109 kB] Get:178 http://deb.debian.org/debian bullseye/main amd64 python3-pkg-resources all 52.0.0-4 [190 kB] Get:179 http://deb.debian.org/debian bullseye/main amd64 python3-numpy amd64 1:1.19.5-1 [2693 kB] Get:180 http://deb.debian.org/debian bullseye/main amd64 python3-pil amd64 8.1.2+dfsg-0.3+deb11u1 [445 kB] Get:181 http://deb.debian.org/debian bullseye/main amd64 python3-matplotlib amd64 3.3.4-1 [4163 kB] Get:182 http://deb.debian.org/debian bullseye/main amd64 python3-tz all 2021.1-1 [34.8 kB] Get:183 http://deb.debian.org/debian bullseye/main amd64 python3-pandas-lib amd64 1.1.5+dfsg-2 [3287 kB] Get:184 http://deb.debian.org/debian bullseye/main amd64 python3-pandas all 1.1.5+dfsg-2 [2096 kB] Get:185 http://deb.debian.org/debian bullseye/main amd64 python3-patsy all 0.5.1-3 [172 kB] Get:186 http://deb.debian.org/debian bullseye/main amd64 python3-pubsub all 4.0.3-4 [46.6 kB] Get:187 http://deb.debian.org/debian bullseye/main amd64 python3-scipy amd64 1.6.0-2 [12.3 MB] Get:188 http://deb.debian.org/debian bullseye/main amd64 python3-statsmodels-lib amd64 0.12.2-1 [1366 kB] Get:189 http://deb.debian.org/debian bullseye/main amd64 python3-statsmodels all 0.12.2-1 [4455 kB] Get:190 http://deb.debian.org/debian bullseye/main amd64 python3-wxgtk4.0 amd64 4.0.7+dfsg-10 [6794 kB] Get:191 http://deb.debian.org/debian bullseye/main amd64 tnseq-transit amd64 3.2.1-1 [8955 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 160 MB in 10s (16.8 MB/s) Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6666 files and directories currently installed.) Preparing to unpack .../0-libapparmor1_2.13.6-10_amd64.deb ... Unpacking libapparmor1:amd64 (2.13.6-10) ... Selecting previously unselected package libcap2:amd64. Preparing to unpack .../1-libcap2_1%3a2.44-1_amd64.deb ... Unpacking libcap2:amd64 (1:2.44-1) ... Selecting previously unselected package libargon2-1:amd64. Preparing to unpack .../2-libargon2-1_0~20171227-0.2_amd64.deb ... Unpacking libargon2-1:amd64 (0~20171227-0.2) ... Selecting previously unselected package dmsetup. Preparing to unpack .../3-dmsetup_2%3a1.02.175-2.1_amd64.deb ... Unpacking dmsetup (2:1.02.175-2.1) ... Selecting previously unselected package libdevmapper1.02.1:amd64. Preparing to unpack .../4-libdevmapper1.02.1_2%3a1.02.175-2.1_amd64.deb ... Unpacking libdevmapper1.02.1:amd64 (2:1.02.175-2.1) ... Selecting previously unselected package libjson-c5:amd64. Preparing to unpack .../5-libjson-c5_0.15-2+deb11u1_amd64.deb ... Unpacking libjson-c5:amd64 (0.15-2+deb11u1) ... Selecting previously unselected package libcryptsetup12:amd64. Preparing to unpack .../6-libcryptsetup12_2%3a2.3.7-1+deb11u1_amd64.deb ... Unpacking libcryptsetup12:amd64 (2:2.3.7-1+deb11u1) ... Selecting previously unselected package libip4tc2:amd64. Preparing to unpack .../7-libip4tc2_1.8.7-1_amd64.deb ... Unpacking libip4tc2:amd64 (1.8.7-1) ... Selecting previously unselected package libkmod2:amd64. Preparing to unpack .../8-libkmod2_28-1_amd64.deb ... Unpacking libkmod2:amd64 (28-1) ... Selecting previously unselected package systemd. Preparing to unpack .../9-systemd_247.3-7+deb11u4_amd64.deb ... Unpacking systemd (247.3-7+deb11u4) ... Setting up libapparmor1:amd64 (2.13.6-10) ... Setting up libcap2:amd64 (1:2.44-1) ... Setting up libargon2-1:amd64 (0~20171227-0.2) ... Setting up libjson-c5:amd64 (0.15-2+deb11u1) ... Setting up libip4tc2:amd64 (1.8.7-1) ... Setting up libkmod2:amd64 (28-1) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.175-2.1) ... Setting up libcryptsetup12:amd64 (2:2.3.7-1+deb11u1) ... Setting up systemd (247.3-7+deb11u4) ... Created symlink /etc/systemd/system/getty.target.wants/getty@tty1.service → /lib/systemd/system/getty@.service. Created symlink /etc/systemd/system/multi-user.target.wants/remote-fs.target → /lib/systemd/system/remote-fs.target. Created symlink /etc/systemd/system/sysinit.target.wants/systemd-pstore.service → /lib/systemd/system/systemd-pstore.service. Initializing machine ID from random generator. Setting up dmsetup (2:1.02.175-2.1) ... Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7523 files and directories currently installed.) Preparing to unpack .../00-systemd-sysv_247.3-7+deb11u4_amd64.deb ... Unpacking systemd-sysv (247.3-7+deb11u4) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../01-libdbus-1-3_1.12.28-0+deb11u1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.12.28-0+deb11u1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../02-libexpat1_2.2.10-2+deb11u5_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-2+deb11u5) ... Selecting previously unselected package dbus. Preparing to unpack .../03-dbus_1.12.28-0+deb11u1_amd64.deb ... Unpacking dbus (1.12.28-0+deb11u1) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../04-perl-modules-5.32_5.32.1-4+deb11u2_all.deb ... Unpacking perl-modules-5.32 (5.32.1-4+deb11u2) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../05-libgdbm6_1.19-2_amd64.deb ... Unpacking libgdbm6:amd64 (1.19-2) ... Selecting previously unselected package libgdbm-compat4:amd64. Preparing to unpack .../06-libgdbm-compat4_1.19-2_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.19-2) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../07-libperl5.32_5.32.1-4+deb11u2_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-4+deb11u2) ... Selecting previously unselected package perl. Preparing to unpack .../08-perl_5.32.1-4+deb11u2_amd64.deb ... Unpacking perl (5.32.1-4+deb11u2) ... Selecting previously unselected package libpython3.9-minimal:amd64. Preparing to unpack .../09-libpython3.9-minimal_3.9.2-1_amd64.deb ... Unpacking libpython3.9-minimal:amd64 (3.9.2-1) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../10-python3.9-minimal_3.9.2-1_amd64.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:amd64 (3.9.2-1) ... Setting up libexpat1:amd64 (2.2.10-2+deb11u5) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9856 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.9.2-3_amd64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package mailcap. Preparing to unpack .../02-mailcap_3.69_all.deb ... Unpacking mailcap (3.69) ... Selecting previously unselected package mime-support. Preparing to unpack .../03-mime-support_3.66_all.deb ... Unpacking mime-support (3.66) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../04-libmpdec3_2.5.1-1_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-1) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../05-libncursesw6_6.2+20201114-2+deb11u2_amd64.deb ... Unpacking libncursesw6:amd64 (6.2+20201114-2+deb11u2) ... Selecting previously unselected package readline-common. Preparing to unpack .../06-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../07-libreadline8_8.1-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../08-libsqlite3-0_3.34.1-3_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.34.1-3) ... Selecting previously unselected package libpython3.9-stdlib:amd64. Preparing to unpack .../09-libpython3.9-stdlib_3.9.2-1_amd64.deb ... Unpacking libpython3.9-stdlib:amd64 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../10-python3.9_3.9.2-1_amd64.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../11-libpython3-stdlib_3.9.2-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10318 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_amd64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libpam-systemd:amd64. Preparing to unpack .../002-libpam-systemd_247.3-7+deb11u4_amd64.deb ... Unpacking libpam-systemd:amd64 (247.3-7+deb11u4) ... Selecting previously unselected package ucf. Preparing to unpack .../003-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package hicolor-icon-theme. Preparing to unpack .../004-hicolor-icon-theme_0.17-2_all.deb ... Unpacking hicolor-icon-theme (0.17-2) ... Selecting previously unselected package libgdk-pixbuf2.0-common. Preparing to unpack .../005-libgdk-pixbuf2.0-common_2.42.2+dfsg-1+deb11u1_all.deb ... Unpacking libgdk-pixbuf2.0-common (2.42.2+dfsg-1+deb11u1) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../006-libglib2.0-0_2.66.8-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.66.8-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../007-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. 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Setting up libblas3:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.0.6-4) ... Setting up libx11-data (2:1.7.2-1+deb11u1) ... Setting up libepoxy0:amd64 (1.5.5-1) ... Setting up libavahi-common-data:amd64 (0.8-5+deb11u2) ... Setting up libdbus-1-3:amd64 (1.12.28-0+deb11u1) ... Setting up dbus (1.12.28-0+deb11u1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libfribidi0:amd64 (1.0.8-2+deb11u1) ... Setting up libquadmath0:amd64 (10.2.1-6) ... Setting up libimagequant0:amd64 (2.12.2-1.1) ... Setting up libpng16-16:amd64 (1.6.37-3) ... Setting up libwebp6:amd64 (0.6.1-2.1+deb11u2) ... Setting up libsensors5:amd64 (1:3.6.0-7) ... Setting up libncursesw6:amd64 (6.2+20201114-2+deb11u2) ... Setting up libglapi-mesa:amd64 (20.3.5-1) ... Setting up libgfortran5:amd64 (10.2.1-6) ... Setting up libvulkan1:amd64 (1.2.162.0-1) ... Setting up libatk1.0-data (2.36.0-2) ... Setting up libmd0:amd64 (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up libxshmfence1:amd64 (1.3-1) ... Setting up libmpdec3:amd64 (2.5.1-1) ... Setting up libpam-systemd:amd64 (247.3-7+deb11u4) ... Setting up libthai-data (0.1.28-3) ... Setting up libwxbase3.0-0v5:amd64 (3.0.5.1+dfsg-2) ... Setting up libjson-glib-1.0-common (1.6.2-1) ... Setting up libatk1.0-0:amd64 (2.36.0-2) ... Setting up libtiff5:amd64 (4.2.0-1+deb11u4) ... Setting up libwayland-egl1:amd64 (1.18.0-2~exp1.1) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up glib-networking-common (2.66.0-2) ... Setting up python-matplotlib-data (3.3.4-1) ... Setting up libwebpmux3:amd64 (0.6.1-2.1+deb11u2) ... Setting up libbsd0:amd64 (0.11.3-1+deb11u1) ... Setting up libdrm-common (2.4.104-1) ... Setting up libelf1:amd64 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7+deb11u4) ... Setting up libgdbm6:amd64 (1.19-2) ... Setting up libxkbcommon0:amd64 (1.0.3-2) ... Setting up libwayland-client0:amd64 (1.18.0-2~exp1.1) ... Setting up glib-networking-services (2.66.0-2) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.14-3) ... Setting up libxcb-xfixes0:amd64 (1.14-3) ... Setting up libxcb-render0:amd64 (1.14-3) ... Setting up libxcb-glx0:amd64 (1.14-3) ... Setting up libwebpdemux2:amd64 (0.6.1-2.1+deb11u2) ... Setting up libedit2:amd64 (3.1-20191231-2+b1) ... Setting up libreadline8:amd64 (8.1-1) ... Setting up libavahi-common3:amd64 (0.8-5+deb11u2) ... Setting up libxcb-shm0:amd64 (1.14-3) ... Setting up libjson-glib-1.0-0:amd64 (1.6.2-1) ... Setting up libxcb-present0:amd64 (1.14-3) ... Setting up libthai0:amd64 (0.1.28-3) ... Setting up dbus-user-session (1.12.28-0+deb11u1) ... Setting up libllvm11:amd64 (1:11.0.1-2) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8+deb11u1) ... Setting up libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Setting up libxcb-sync1:amd64 (1.14-3) ... Setting up shared-mime-info (2.0-1) ... Setting up libgdbm-compat4:amd64 (1.19-2) ... Setting up ucf (3.0043) ... Setting up libperl5.32:amd64 (5.32.1-4+deb11u2) ... Setting up libxcb-dri2-0:amd64 (1.14-3) ... Setting up libdrm2:amd64 (2.4.104-1) ... Setting up libwayland-cursor0:amd64 (1.18.0-2~exp1.1) ... Setting up libx11-6:amd64 (2:1.7.2-1+deb11u1) ... Setting up libharfbuzz0b:amd64 (2.7.4-1) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.2+dfsg-1+deb11u1) ... Setting up libxcomposite1:amd64 (1:0.4.5-1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libavahi-client3:amd64 (0.8-5+deb11u2) ... Setting up libpython3.9-stdlib:amd64 (3.9.2-1) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.3-9) ... Setting up libdrm-amdgpu1:amd64 (2.4.104-1) ... Setting up libxcb-dri3-0:amd64 (1.14-3) ... Setting up gtk-update-icon-cache (3.24.24-4+deb11u3) ... Setting up libx11-xcb1:amd64 (2:1.7.2-1+deb11u1) ... Setting up libdrm-nouveau2:amd64 (2.4.104-1) ... Setting up libxdamage1:amd64 (1:1.1.5-2) ... Setting up libgdk-pixbuf-xlib-2.0-0:amd64 (2.40.2-2) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libdrm-radeon1:amd64 (2.4.104-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up libdrm-intel1:amd64 (2.4.104-1) ... Setting up libgl1-mesa-dri:amd64 (20.3.5-1) ... Setting up libxext6:amd64 (2:1.3.3-1.1) ... Setting up dconf-service (0.38.0-2) ... Setting up libatspi2.0-0:amd64 (2.38.0-4+deb11u1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libatk-bridge2.0-0:amd64 (2.38.0-1) ... Setting up perl (5.32.1-4+deb11u2) ... Setting up adwaita-icon-theme (3.38.0-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libxfixes3:amd64 (1:5.0.3-2) ... Setting up libnotify4:amd64 (0.7.9-3) ... Setting up libgdk-pixbuf2.0-0:amd64 (2.40.2-2) ... Setting up libxinerama1:amd64 (2:1.1.4-2) ... Setting up libxrandr2:amd64 (2:1.5.1-1) ... Setting up libcups2:amd64 (2.3.3op2-3+deb11u6) ... Setting up libfontconfig1:amd64 (2.13.1-4.2) ... Setting up mailcap (3.69) ... Setting up python3.9 (3.9.2-1) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libglx-mesa0:amd64 (20.3.5-1) ... Setting up mime-support (3.66) ... Setting up libxi6:amd64 (2:1.7.10-1) ... Setting up libglx0:amd64 (1.3.2-1) ... Setting up dconf-gsettings-backend:amd64 (0.38.0-2) ... Setting up libxcursor1:amd64 (1:1.2.0-2) ... Setting up libpango-1.0-0:amd64 (1.46.2-3) ... Setting up python3 (3.9.2-3) ... Setting up libcairo2:amd64 (1.16.0-5) ... Setting up python3-tz (2021.1-1) ... Setting up python3-six (1.16.0-2) ... Setting up python3-pil:amd64 (8.1.2+dfsg-0.3+deb11u1) ... Setting up python3-decorator (4.4.2-2) ... Setting up libgl1:amd64 (1.3.2-1) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up python3-cycler (0.10.0-3) ... Setting up python3-kiwisolver (1.3.1-1+b1) ... Setting up python3-pubsub (4.0.3-4) ... Setting up python3-dateutil (2.8.1-6) ... Setting up libcairo-gobject2:amd64 (1.16.0-5) ... Setting up libpangoft2-1.0-0:amd64 (1.46.2-3) ... Setting up libgtk-3-common (3.24.24-4+deb11u3) ... Setting up libpangocairo-1.0-0:amd64 (1.46.2-3) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up gsettings-desktop-schemas (3.38.0-2) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up glib-networking:amd64 (2.66.0-2) ... Setting up python3-statsmodels-lib:amd64 (0.12.2-1) ... Setting up python3-matplotlib (3.3.4-1) ... Setting up python3-scipy (1.6.0-2) ... Setting up libsoup2.4-1:amd64 (2.72.0-2) ... Setting up python3-pandas-lib:amd64 (1.1.5+dfsg-2) ... Setting up python3-patsy (0.5.1-3) ... Setting up python3-pandas (1.1.5+dfsg-2) ... Setting up python3-statsmodels (0.12.2-1) ... Setting up libsoup-gnome2.4-1:amd64 (2.72.0-2) ... Setting up librest-0.7-0:amd64 (0.8.1-1.1) ... Setting up libgtk-3-0:amd64 (3.24.24-4+deb11u3) ... Setting up libwxgtk3.0-gtk3-0v5:amd64 (3.0.5.1+dfsg-2) ... Setting up python3-wxgtk4.0 (4.0.7+dfsg-10) ... Setting up tnseq-transit (3.2.1-1) ... /usr/lib/python3/dist-packages/pytpp/tpp_tools.py:648: SyntaxWarning: "is" with a literal. Did you mean "=="? if vars.num_replicons is 1: /usr/lib/python3/dist-packages/pytpp/tpp_tools.py:651: SyntaxWarning: "is" with a literal. Did you mean "=="? elif len(vars.replicon_ids) is 1 and vars.replicon_ids[0].strip() == 'auto': Processing triggers for libc-bin (2.31-13+deb11u6) ... 1m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-y', 'install', 'tnseq-transit'] 1m7.0s INFO: Running scripts post_install 1m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_install_exceptions'] 1m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_install_exceptions'] 1m7.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m8.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m8.5s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpc01ewnr4 to bullseye-next 1m8.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main deb http://security.debian.org bullseye-security main deb http://deb.debian.org/debian/ bullseye-updates main deb http://deb.debian.org/debian/ bullseye-proposed-updates main 1m8.5s INFO: Running scripts pre_distupgrade 1m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 1m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 1m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_exceptions'] 1m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_exceptions'] 1m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 1m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 1m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_zz_database-server'] 1m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_zz_database-server'] 1m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 1m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 1m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', 'update'] 1m10.6s DUMP: Get:1 http://security.debian.org bullseye-security InRelease [48.4 kB] Hit:2 http://deb.debian.org/debian bullseye InRelease Get:3 http://deb.debian.org/debian bullseye-updates InRelease [44.1 kB] Get:4 http://deb.debian.org/debian bullseye-proposed-updates InRelease [54.0 kB] Get:5 http://security.debian.org bullseye-security/main amd64 Packages [265 kB] Get:6 http://security.debian.org bullseye-security/main Translation-en [171 kB] Get:7 http://deb.debian.org/debian bullseye-updates/main amd64 Packages [18.8 kB] Get:8 http://deb.debian.org/debian bullseye-updates/main Translation-en [10.9 kB] Get:9 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 Packages [159 kB] Get:10 http://deb.debian.org/debian bullseye-proposed-updates/main Translation-en [92.4 kB] Fetched 863 kB in 1s (811 kB/s) Reading package lists... 1m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', 'update'] 1m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-yf', 'dist-upgrade'] 1m16.3s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libc-bin libc6 libglib2.0-0 libgnutls30 libjs-jquery-ui libperl5.32 libtiff5 libx11-6 libx11-data libx11-xcb1 perl perl-base perl-modules-5.32 tar tzdata 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 18.2 MB of archives. After this operation, 12.3 kB of additional disk space will be used. Get:1 http://security.debian.org bullseye-security/main amd64 libc6 amd64 2.31-13+deb11u7 [2823 kB] Get:2 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 libperl5.32 amd64 5.32.1-4+deb11u3 [4121 kB] Get:3 http://security.debian.org bullseye-security/main amd64 libc-bin amd64 2.31-13+deb11u7 [829 kB] Get:4 http://security.debian.org bullseye-security/main amd64 libtiff5 amd64 4.2.0-1+deb11u5 [290 kB] Get:5 http://security.debian.org bullseye-security/main amd64 libx11-data all 2:1.7.2-1+deb11u2 [311 kB] Get:6 http://security.debian.org bullseye-security/main amd64 libx11-6 amd64 2:1.7.2-1+deb11u2 [772 kB] Get:7 http://security.debian.org bullseye-security/main amd64 libx11-xcb1 amd64 2:1.7.2-1+deb11u2 [204 kB] Get:8 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 perl amd64 5.32.1-4+deb11u3 [293 kB] Get:9 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 perl-base amd64 5.32.1-4+deb11u3 [1628 kB] Get:10 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 perl-modules-5.32 all 5.32.1-4+deb11u3 [2823 kB] Get:11 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 tar amd64 1.34+dfsg-1+deb11u1 [847 kB] Get:12 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 libgnutls30 amd64 3.7.1-5+deb11u4 [1340 kB] Get:13 http://deb.debian.org/debian bullseye-updates/main amd64 tzdata all 2021a-1+deb11u11 [287 kB] Get:14 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 libglib2.0-0 amd64 2.66.8-1+deb11u1 [1374 kB] Get:15 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 libjs-jquery-ui all 1.12.1+dfsg-8+deb11u2 [232 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.2 MB in 0s (92.9 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 25800 files and directories currently installed.) Preparing to unpack .../libperl5.32_5.32.1-4+deb11u3_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-4+deb11u3) over (5.32.1-4+deb11u2) ... Preparing to unpack .../perl_5.32.1-4+deb11u3_amd64.deb ... Unpacking perl (5.32.1-4+deb11u3) over (5.32.1-4+deb11u2) ... Preparing to unpack .../perl-base_5.32.1-4+deb11u3_amd64.deb ... Unpacking perl-base (5.32.1-4+deb11u3) over (5.32.1-4+deb11u2) ... Setting up perl-base (5.32.1-4+deb11u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 25800 files and directories currently installed.) Preparing to unpack .../perl-modules-5.32_5.32.1-4+deb11u3_all.deb ... Unpacking perl-modules-5.32 (5.32.1-4+deb11u3) over (5.32.1-4+deb11u2) ... Preparing to unpack .../libc6_2.31-13+deb11u7_amd64.deb ... Unpacking libc6:amd64 (2.31-13+deb11u7) over (2.31-13+deb11u6) ... Setting up libc6:amd64 (2.31-13+deb11u7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 25800 files and directories currently installed.) Preparing to unpack .../tar_1.34+dfsg-1+deb11u1_amd64.deb ... Unpacking tar (1.34+dfsg-1+deb11u1) over (1.34+dfsg-1) ... Setting up tar (1.34+dfsg-1+deb11u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 25800 files and directories currently installed.) Preparing to unpack .../libc-bin_2.31-13+deb11u7_amd64.deb ... Unpacking libc-bin (2.31-13+deb11u7) over (2.31-13+deb11u6) ... Setting up libc-bin (2.31-13+deb11u7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 25800 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.7.1-5+deb11u4_amd64.deb ... Unpacking libgnutls30:amd64 (3.7.1-5+deb11u4) over (3.7.1-5+deb11u3) ... Setting up libgnutls30:amd64 (3.7.1-5+deb11u4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 25800 files and directories currently installed.) Preparing to unpack .../0-tzdata_2021a-1+deb11u11_all.deb ... Unpacking tzdata (2021a-1+deb11u11) over (2021a-1+deb11u10) ... Preparing to unpack .../1-libglib2.0-0_2.66.8-1+deb11u1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.66.8-1+deb11u1) over (2.66.8-1) ... Preparing to unpack .../2-libjs-jquery-ui_1.12.1+dfsg-8+deb11u2_all.deb ... Unpacking libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) over (1.12.1+dfsg-8+deb11u1) ... Preparing to unpack .../3-libtiff5_4.2.0-1+deb11u5_amd64.deb ... Unpacking libtiff5:amd64 (4.2.0-1+deb11u5) over (4.2.0-1+deb11u4) ... Preparing to unpack .../4-libx11-data_2%3a1.7.2-1+deb11u2_all.deb ... Unpacking libx11-data (2:1.7.2-1+deb11u2) over (2:1.7.2-1+deb11u1) ... Preparing to unpack .../5-libx11-6_2%3a1.7.2-1+deb11u2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.7.2-1+deb11u2) over (2:1.7.2-1+deb11u1) ... Preparing to unpack .../6-libx11-xcb1_2%3a1.7.2-1+deb11u2_amd64.deb ... Unpacking libx11-xcb1:amd64 (2:1.7.2-1+deb11u2) over (2:1.7.2-1+deb11u1) ... Setting up libglib2.0-0:amd64 (2.66.8-1+deb11u1) ... Setting up perl-modules-5.32 (5.32.1-4+deb11u3) ... Setting up tzdata (2021a-1+deb11u11) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Jan 30 18:50:42 UTC 2024. Universal Time is now: Tue Jan 30 18:50:42 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) ... Setting up libx11-data (2:1.7.2-1+deb11u2) ... Setting up libperl5.32:amd64 (5.32.1-4+deb11u3) ... Setting up libx11-6:amd64 (2:1.7.2-1+deb11u2) ... Setting up libtiff5:amd64 (4.2.0-1+deb11u5) ... Setting up libx11-xcb1:amd64 (2:1.7.2-1+deb11u2) ... Setting up perl (5.32.1-4+deb11u3) ... Processing triggers for libc-bin (2.31-13+deb11u7) ... Processing triggers for mailcap (3.69) ... 1m16.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-yf', 'dist-upgrade'] 1m16.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m16.6s DUMP: c1e28441bf6f24e306beebc11bafef5a - 1m16.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m16.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'show', '--no-all-versions', 'tnseq-transit'] 1m16.9s DUMP: Package: tnseq-transit Version: 3.2.1-1 Installed-Size: 76920 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: transit Provides: transit Depends: python3-matplotlib, python3-numpy, python3-pil, python3-pkg-resources, python3-scipy, python3-statsmodels, python3:any, python3-pubsub, python3-wxgtk4.0, bwa Breaks: transit Description-en: statistical calculations of essentiality of genes or genomic regions This is a software that can be used to analyze Tn-Seq datasets. It includes various statistical calculations of essentiality of genes or genomic regions (including conditional essentiality between 2 conditions). These methods were developed and tested as a collaboration between the Sassetti lab (UMass) and the Ioerger lab (Texas A&M) . TRANSIT is capable of analyzing TnSeq libraries constructed with Himar1 or Tn5 datasets. . TRANSIT assumes you have already done pre-processing of raw sequencing files (.fastq) and extracted read counts into a .wig formatted file. The .wig file should contain the counts at all sites where an insertion could take place (including sites with no reads). For Himar1 datasets this is all TA sites in the genome. For Tn5 datasets this would be all nucleotides in the genome. Description-md5: ed6ccc42fdb3924f7848894e28b09ade Homepage: http://saclab.tamu.edu/essentiality/transit/ Section: science Priority: optional Filename: pool/main/t/tnseq-transit/tnseq-transit_3.2.1-1_amd64.deb Size: 8954788 MD5sum: 7588d7d366faa6da023ff66e0e436665 SHA256: 3bf5d90afbd40e1f6f7633ad4c051b799390b0668dedb524237dede6731c043e 1m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'show', '--no-all-versions', 'tnseq-transit'] 1m16.9s INFO: apt-cache knows about the following packages: tnseq-transit 1m16.9s INFO: Running scripts pre_install 1m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_database-server'] 1m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_database-server'] 1m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_exceptions'] 1m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_exceptions'] 1m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_extras'] 1m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_extras'] 1m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture'] 1m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture'] 1m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy'] 1m17.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 Packages release v=11-updates,o=Debian,a=oldstable-proposed-updates,n=bullseye-proposed-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian bullseye-updates/main amd64 Packages release v=11-updates,o=Debian,a=oldstable-updates,n=bullseye-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://security.debian.org bullseye-security/main amd64 Packages release v=11,o=Debian,a=oldstable-security,n=bullseye-security,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian bullseye/main amd64 Packages release v=11.8,o=Debian,a=oldstable,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy'] 1m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy', 'tnseq-transit'] 1m17.0s DUMP: tnseq-transit: Installed: 3.2.1-1 Candidate: 3.2.1-1 Version table: *** 3.2.1-1 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 100 /var/lib/dpkg/status 1m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy', 'tnseq-transit'] 1m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-y', 'install', 'tnseq-transit'] 1m17.5s DUMP: Reading package lists... Building dependency tree... Reading state information... tnseq-transit is already the newest version (3.2.1-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-y', 'install', 'tnseq-transit'] 1m17.5s INFO: Running scripts post_install 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_install_exceptions'] 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_install_exceptions'] 1m17.5s INFO: Running scripts post_distupgrade 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_exceptions'] 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_exceptions'] 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_zz_backports'] 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_distupgrade_zz_backports'] 1m17.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m18.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m18.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m19.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m19.9s INFO: Running scripts pre_install 1m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_database-server'] 1m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_database-server'] 1m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_exceptions'] 1m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_exceptions'] 1m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_extras'] 1m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_extras'] 1m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture'] 1m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture'] 1m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy'] 1m20.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye-proposed-updates/main amd64 Packages release v=11-updates,o=Debian,a=oldstable-proposed-updates,n=bullseye-proposed-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian bullseye-updates/main amd64 Packages release v=11-updates,o=Debian,a=oldstable-updates,n=bullseye-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://security.debian.org bullseye-security/main amd64 Packages release v=11,o=Debian,a=oldstable-security,n=bullseye-security,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian bullseye/main amd64 Packages release v=11.8,o=Debian,a=oldstable,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy'] 1m20.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy', 'tnseq-transit'] 1m20.0s DUMP: tnseq-transit: Installed: 3.2.1-1 Candidate: 3.2.1-1 Version table: *** 3.2.1-1 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 100 /var/lib/dpkg/status 1m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-cache', 'policy', 'tnseq-transit'] 1m20.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-y', 'install', 'tnseq-transit=3.2.1-1'] 1m20.5s DUMP: Reading package lists... Building dependency tree... Reading state information... tnseq-transit is already the newest version (3.2.1-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', '-y', 'install', 'tnseq-transit=3.2.1-1'] 1m20.5s INFO: Running scripts post_install 1m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_install_exceptions'] 1m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_install_exceptions'] 1m20.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m22.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m22.3s DEBUG: No file moved between /{bin|sbin|lib*} and /usr/{bin|sbin|lib*}. 1m22.3s INFO: /bin converted to /usr/bin by /usr merge 1m22.3s INFO: /lib converted to /usr/lib by /usr merge 1m22.3s INFO: /lib/init converted to /usr/lib/init by /usr merge 1m22.3s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 1m22.3s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 1m22.3s INFO: /lib/modprobe.d converted to /usr/lib/modprobe.d by /usr merge 1m22.3s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 1m22.3s INFO: /lib/systemd/network converted to /usr/lib/systemd/network by /usr merge 1m22.3s INFO: /lib/systemd/system-generators converted to /usr/lib/systemd/system-generators by /usr merge 1m22.3s INFO: /lib/systemd/system-preset converted to /usr/lib/systemd/system-preset by /usr merge 1m22.3s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 1m22.3s INFO: /lib/systemd/system/getty.target.wants converted to /usr/lib/systemd/system/getty.target.wants by /usr merge 1m22.3s INFO: /lib/systemd/system/graphical.target.wants converted to /usr/lib/systemd/system/graphical.target.wants by /usr merge 1m22.3s INFO: /lib/systemd/system/initrd-root-device.target.wants converted to /usr/lib/systemd/system/initrd-root-device.target.wants by /usr merge 1m22.3s INFO: /lib/systemd/system/multi-user.target.wants converted to /usr/lib/systemd/system/multi-user.target.wants by /usr merge 1m22.3s INFO: /lib/systemd/system/rc-local.service.d converted to /usr/lib/systemd/system/rc-local.service.d by /usr merge 1m22.3s INFO: /lib/systemd/system/rescue.target.wants converted to /usr/lib/systemd/system/rescue.target.wants by /usr merge 1m22.3s INFO: /lib/systemd/system/sockets.target.wants converted to /usr/lib/systemd/system/sockets.target.wants by /usr merge 1m22.3s INFO: /lib/systemd/system/sysinit.target.wants converted to /usr/lib/systemd/system/sysinit.target.wants by /usr merge 1m22.3s INFO: /lib/systemd/system/systemd-localed.service.d converted to /usr/lib/systemd/system/systemd-localed.service.d by /usr merge 1m22.3s INFO: /lib/systemd/system/timers.target.wants converted to /usr/lib/systemd/system/timers.target.wants by /usr merge 1m22.3s INFO: /lib/systemd/system/user-.slice.d converted to /usr/lib/systemd/system/user-.slice.d by /usr merge 1m22.3s INFO: /lib/terminfo converted to /usr/lib/terminfo by /usr merge 1m22.3s INFO: /lib/terminfo/E converted to /usr/lib/terminfo/E by /usr merge 1m22.3s INFO: /lib/terminfo/a converted to /usr/lib/terminfo/a by /usr merge 1m22.3s INFO: /lib/terminfo/c converted to /usr/lib/terminfo/c by /usr merge 1m22.3s INFO: /lib/terminfo/d converted to /usr/lib/terminfo/d by /usr merge 1m22.3s INFO: /lib/terminfo/h converted to /usr/lib/terminfo/h by /usr merge 1m22.3s INFO: /lib/terminfo/l converted to /usr/lib/terminfo/l by /usr merge 1m22.3s INFO: /lib/terminfo/m converted to /usr/lib/terminfo/m by /usr merge 1m22.3s INFO: /lib/terminfo/p converted to /usr/lib/terminfo/p by /usr merge 1m22.3s INFO: /lib/terminfo/r converted to /usr/lib/terminfo/r by /usr merge 1m22.3s INFO: /lib/terminfo/s converted to /usr/lib/terminfo/s by /usr merge 1m22.3s INFO: /lib/terminfo/t converted to /usr/lib/terminfo/t by /usr merge 1m22.3s INFO: /lib/terminfo/v converted to /usr/lib/terminfo/v by /usr merge 1m22.3s INFO: /lib/terminfo/w converted to /usr/lib/terminfo/w by /usr merge 1m22.3s INFO: /lib/terminfo/x converted to /usr/lib/terminfo/x by /usr merge 1m22.3s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 1m22.3s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 1m22.3s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 1m22.3s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 1m22.4s INFO: /lib64 converted to /usr/lib64 by /usr merge 1m22.4s INFO: /sbin converted to /usr/sbin by /usr merge 1m23.9s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', '-ac', '--ignore-obsolete'] 1m28.0s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', '-ac', '--ignore-obsolete'] 1m28.0s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m28.0s DUMP: 0.15.6 1m28.0s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m28.0s INFO: Running adequate version 0.15.6 now. 1m28.0s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tnseq-transit'] 1m28.2s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tnseq-transit'] 1m28.2s INFO: Running scripts pre_remove 1m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m36.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m36.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m36.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m36.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m36.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m36.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_exceptions'] 1m36.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/pre_remove_exceptions'] 1m36.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m36.8s DUMP: install ok installed adduser adduser 3.118+deb11u1 install ok installed adwaita-icon-theme adwaita-icon-theme 3.38.0-1 install ok installed apt apt 2.2.4 install ok installed base-files base-files 11.1+deb11u8 install ok installed base-passwd base-passwd 3.5.51 install ok installed bash bash 5.1-2+deb11u1 install ok installed bsdutils bsdutils 1:2.36.1-8+deb11u1 install ok installed bwa bwa 0.7.17-6+b1 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-5 install ok installed dbus dbus 1.12.28-0+deb11u1 install ok installed dbus-user-session dbus-user-session 1.12.28-0+deb11u1 install ok installed dconf-gsettings-backend:amd64 dconf-gsettings-backend 0.38.0-2 install ok installed dconf-service dconf-service 0.38.0-2 install ok installed debconf debconf 1.5.77 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1+deb11u1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-5 install ok installed dmsetup dmsetup 2:1.02.175-2.1 install ok installed dpkg dpkg 1.20.13 install ok installed e2fsprogs e2fsprogs 1.46.2-2 install ok installed findutils findutils 4.8.0-1 install ok installed fontconfig fontconfig 2.13.1-4.2 install ok installed fontconfig-config fontconfig-config 2.13.1-4.2 install ok installed fonts-lyx fonts-lyx 2.3.6-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-22 install ok installed glib-networking:amd64 glib-networking 2.66.0-2 install ok installed glib-networking-common glib-networking-common 2.66.0-2 install ok installed glib-networking-services glib-networking-services 2.66.0-2 install ok installed gpgv gpgv 2.2.27-2+deb11u2 install ok installed grep grep 3.6-1+deb11u1 install ok installed gsettings-desktop-schemas gsettings-desktop-schemas 3.38.0-2 install ok installed gtk-update-icon-cache gtk-update-icon-cache 3.24.24-4+deb11u3 install ok installed gzip gzip 1.10-4+deb11u1 install ok installed hicolor-icon-theme hicolor-icon-theme 0.17-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.60 install ok installed libacl1:amd64 libacl1 2.2.53-10 install ok installed libapparmor1:amd64 libapparmor1 2.13.6-10 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.2.4 install ok installed libargon2-1:amd64 libargon2-1 0~20171227-0.2 install ok installed libatk-bridge2.0-0:amd64 libatk-bridge2.0-0 2.38.0-1 install ok installed libatk1.0-0:amd64 libatk1.0-0 2.36.0-2 install ok installed libatk1.0-data libatk1.0-data 2.36.0-2 install ok installed libatspi2.0-0:amd64 libatspi2.0-0 2.38.0-4+deb11u1 install ok installed libattr1:amd64 libattr1 1:2.4.48-6 install ok installed libaudit-common libaudit-common 1:3.0-2 install ok installed libaudit1:amd64 libaudit1 1:3.0-2 install ok installed libavahi-client3:amd64 libavahi-client3 0.8-5+deb11u2 install ok installed libavahi-common-data:amd64 libavahi-common-data 0.8-5+deb11u2 install ok installed libavahi-common3:amd64 libavahi-common3 0.8-5+deb11u2 install ok installed libblas3:amd64 libblas3 3.9.0-3+deb11u1 install ok installed libblkid1:amd64 libblkid1 2.36.1-8+deb11u1 install ok installed libbrotli1:amd64 libbrotli1 1.0.9-2+b2 install ok installed libbsd0:amd64 libbsd0 0.11.3-1+deb11u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-13+deb11u7 install ok installed libc6:amd64 libc6 2.31-13+deb11u7 install ok installed libcairo-gobject2:amd64 libcairo-gobject2 1.16.0-5 install ok installed libcairo2:amd64 libcairo2 1.16.0-5 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcap2:amd64 libcap2 1:2.44-1 install ok installed libcolord2:amd64 libcolord2 1.4.5-3 install ok installed libcom-err2:amd64 libcom-err2 1.46.2-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.18-4 install ok installed libcryptsetup12:amd64 libcryptsetup12 2:2.3.7-1+deb11u1 install ok installed libcups2:amd64 libcups2 2.3.3op2-3+deb11u6 install ok installed libdatrie1:amd64 libdatrie1 0.2.13-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.8 install ok installed libdbus-1-3:amd64 libdbus-1-3 1.12.28-0+deb11u1 install ok installed libdconf1:amd64 libdconf1 0.38.0-2 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.260 install ok installed libdeflate0:amd64 libdeflate0 1.7-1 install ok installed libdevmapper1.02.1:amd64 libdevmapper1.02.1 2:1.02.175-2.1 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.104-1 install ok installed libdrm-common libdrm-common 2.4.104-1 install ok installed libdrm-intel1:amd64 libdrm-intel1 2.4.104-1 install ok installed libdrm-nouveau2:amd64 libdrm-nouveau2 2.4.104-1 install ok installed libdrm-radeon1:amd64 libdrm-radeon1 2.4.104-1 install ok installed libdrm2:amd64 libdrm2 2.4.104-1 install ok installed libedit2:amd64 libedit2 3.1-20191231-2+b1 install ok installed libelf1:amd64 libelf1 0.183-1 install ok installed libepoxy0:amd64 libepoxy0 1.5.5-1 install ok installed libexpat1:amd64 libexpat1 2.2.10-2+deb11u5 install ok installed libext2fs2:amd64 libext2fs2 1.46.2-2 install ok installed libffi7:amd64 libffi7 3.3-6 install ok installed libfontconfig1:amd64 libfontconfig1 2.13.1-4.2 install ok installed libfreetype6:amd64 libfreetype6 2.10.4+dfsg-1+deb11u1 install ok installed libfribidi0:amd64 libfribidi0 1.0.8-2+deb11u1 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.1-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-6 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.19-2 install ok installed libgdbm6:amd64 libgdbm6 1.19-2 install ok installed libgdk-pixbuf-2.0-0:amd64 libgdk-pixbuf-2.0-0 2.42.2+dfsg-1+deb11u1 install ok installed libgdk-pixbuf-xlib-2.0-0:amd64 libgdk-pixbuf-xlib-2.0-0 2.40.2-2 install ok installed libgdk-pixbuf2.0-0:amd64 libgdk-pixbuf2.0-0 2.40.2-2 install ok installed libgdk-pixbuf2.0-common libgdk-pixbuf2.0-common 2.42.2+dfsg-1+deb11u1 install ok installed libgfortran5:amd64 libgfortran5 10.2.1-6 install ok installed libgl1:amd64 libgl1 1.3.2-1 install ok installed libgl1-mesa-dri:amd64 libgl1-mesa-dri 20.3.5-1 install ok installed libglapi-mesa:amd64 libglapi-mesa 20.3.5-1 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.66.8-1+deb11u1 install ok installed libglvnd0:amd64 libglvnd0 1.3.2-1 install ok installed libglx-mesa0:amd64 libglx-mesa0 20.3.5-1 install ok installed libglx0:amd64 libglx0 1.3.2-1 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1+deb11u1 install ok installed libgnutls30:amd64 libgnutls30 3.7.1-5+deb11u4 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-6+deb11u4 install ok installed libgtk-3-0:amd64 libgtk-3-0 3.24.24-4+deb11u3 install ok installed libgtk-3-common libgtk-3-common 3.24.24-4+deb11u3 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 2.7.4-1 install ok installed libhogweed6:amd64 libhogweed6 3.7.3-1 install ok installed libice6:amd64 libice6 2:1.0.10-1 install ok installed libicu67:amd64 libicu67 67.1-7 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-5 install ok installed libimagequant0:amd64 libimagequant0 2.12.2-1.1 install ok installed libip4tc2:amd64 libip4tc2 1.8.7-1 install ok installed libjbig0:amd64 libjbig0 2.1-3.1+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.0.6-4 install ok installed libjs-jquery libjs-jquery 3.5.1+dfsg+~3.5.5-7 install ok installed libjs-jquery-ui libjs-jquery-ui 1.12.1+dfsg-8+deb11u2 install ok installed libjson-c5:amd64 libjson-c5 0.15-2+deb11u1 install ok installed libjson-glib-1.0-0:amd64 libjson-glib-1.0-0 1.6.2-1 install ok installed libjson-glib-1.0-common libjson-glib-1.0-common 1.6.2-1 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-6+deb11u4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkmod2:amd64 libkmod2 28-1 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-6+deb11u4 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-6+deb11u4 install ok installed liblapack3:amd64 liblapack3 3.9.0-3+deb11u1 install ok installed liblbfgsb0:amd64 liblbfgsb0 3.0+dfsg.3-9 install ok installed liblcms2-2:amd64 liblcms2-2 2.12~rc1-2 install ok installed libllvm11:amd64 libllvm11 1:11.0.1-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1~deb11u1 install ok installed libmd0:amd64 libmd0 1.0.3-3 install ok installed libmount1:amd64 libmount1 2.36.1-8+deb11u1 install ok installed libmpdec3:amd64 libmpdec3 2.5.1-1 install ok installed libncursesw6:amd64 libncursesw6 6.2+20201114-2+deb11u2 install ok installed libnettle8:amd64 libnettle8 3.7.3-1 install ok installed libnotify4:amd64 libnotify4 0.7.9-3 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.22-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-9+deb11u1 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-9+deb11u1 install ok installed libpam-runtime libpam-runtime 1.4.0-9+deb11u1 install ok installed libpam-systemd:amd64 libpam-systemd 247.3-7+deb11u4 install ok installed libpam0g:amd64 libpam0g 1.4.0-9+deb11u1 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.46.2-3 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.46.2-3 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.46.2-3 install ok installed libpciaccess0:amd64 libpciaccess0 0.16-1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.36-2+deb11u1 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libperl5.32:amd64 libperl5.32 5.32.1-4+deb11u3 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.40.0-1.1~deb11u1 install ok installed libpng16-16:amd64 libpng16-16 1.6.37-3 install ok installed libproxy1v5:amd64 libproxy1v5 0.4.17-1 install ok installed libpsl5:amd64 libpsl5 0.21.0-1.2 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.9.2-3 install ok installed libpython3.9-minimal:amd64 libpython3.9-minimal 3.9.2-1 install ok installed libpython3.9-stdlib:amd64 libpython3.9-stdlib 3.9.2-1 install ok installed libquadmath0:amd64 libquadmath0 10.2.1-6 install ok installed libreadline8:amd64 libreadline8 8.1-1 install ok installed librest-0.7-0:amd64 librest-0.7-0 0.8.1-1.1 install ok installed libseccomp2:amd64 libseccomp2 2.5.1-1+deb11u1 install ok installed libselinux1:amd64 libselinux1 3.1-3 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b2 install ok installed libsensors-config libsensors-config 1:3.6.0-7 install ok installed libsensors5:amd64 libsensors5 1:3.6.0-7 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsm6:amd64 libsm6 2:1.2.3-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-8+deb11u1 install ok installed libsoup-gnome2.4-1:amd64 libsoup-gnome2.4-1 2.72.0-2 install ok installed libsoup2.4-1:amd64 libsoup2.4-1 2.72.0-2 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.34.1-3 install ok installed libss2:amd64 libss2 1.46.2-2 install ok installed libssl1.1:amd64 libssl1.1 1.1.1w-0+deb11u1 install ok installed libstdc++6:amd64 libstdc++6 10.2.1-6 install ok installed libsystemd0:amd64 libsystemd0 247.3-7+deb11u4 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2+deb11u1 install ok installed libthai-data libthai-data 0.1.28-3 install ok installed libthai0:amd64 libthai0 0.1.28-3 install ok installed libtiff5:amd64 libtiff5 4.2.0-1+deb11u5 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-2+deb11u2 install ok installed libtirpc-common libtirpc-common 1.3.1-1+deb11u1 install ok installed libtirpc3:amd64 libtirpc3 1.3.1-1+deb11u1 install ok installed libudev1:amd64 libudev1 247.3-7+deb11u4 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-8+deb11u1 install ok installed libvulkan1:amd64 libvulkan1 1.2.162.0-1 install ok installed libwayland-client0:amd64 libwayland-client0 1.18.0-2~exp1.1 install ok installed libwayland-cursor0:amd64 libwayland-cursor0 1.18.0-2~exp1.1 install ok installed libwayland-egl1:amd64 libwayland-egl1 1.18.0-2~exp1.1 install ok installed libwebp6:amd64 libwebp6 0.6.1-2.1+deb11u2 install ok installed libwebpdemux2:amd64 libwebpdemux2 0.6.1-2.1+deb11u2 install ok installed libwebpmux3:amd64 libwebpmux3 0.6.1-2.1+deb11u2 install ok installed libwxbase3.0-0v5:amd64 libwxbase3.0-0v5 3.0.5.1+dfsg-2 install ok installed libwxgtk3.0-gtk3-0v5:amd64 libwxgtk3.0-gtk3-0v5 3.0.5.1+dfsg-2 install ok installed libx11-6:amd64 libx11-6 2:1.7.2-1+deb11u2 install ok installed libx11-data libx11-data 2:1.7.2-1+deb11u2 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.7.2-1+deb11u2 install ok installed libxau6:amd64 libxau6 1:1.0.9-1 install ok installed libxcb-dri2-0:amd64 libxcb-dri2-0 1.14-3 install ok installed libxcb-dri3-0:amd64 libxcb-dri3-0 1.14-3 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.14-3 install ok installed libxcb-present0:amd64 libxcb-present0 1.14-3 install ok installed libxcb-render0:amd64 libxcb-render0 1.14-3 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.14-3 install ok installed libxcb-sync1:amd64 libxcb-sync1 1.14-3 install ok installed libxcb-xfixes0:amd64 libxcb-xfixes0 1.14-3 install ok installed libxcb1:amd64 libxcb1 1.14-3 install ok installed libxcomposite1:amd64 libxcomposite1 1:0.4.5-1 install ok installed libxcursor1:amd64 libxcursor1 1:1.2.0-2 install ok installed libxdamage1:amd64 libxdamage1 1:1.1.5-2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.3-1.1 install ok installed libxfixes3:amd64 libxfixes3 1:5.0.3-2 install ok installed libxi6:amd64 libxi6 2:1.7.10-1 install ok installed libxinerama1:amd64 libxinerama1 2:1.1.4-2 install ok installed libxkbcommon0:amd64 libxkbcommon0 1.0.3-2 install ok installed libxml2:amd64 libxml2 2.9.10+dfsg-6.7+deb11u4 install ok installed libxrandr2:amd64 libxrandr2 2:1.5.1-1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1 install ok installed libxshmfence1:amd64 libxshmfence1 1.3-1 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.4-1+b2 install ok installed libxxhash0:amd64 libxxhash0 0.8.0-2 install ok installed libz3-4:amd64 libz3-4 4.8.10-1 install ok installed libzstd1:amd64 libzstd1 1.4.8+dfsg-2.1 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.46.2-2 install ok installed lsb-base lsb-base 11.1.0 install ok installed mailcap mailcap 3.69 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed media-types media-types 4.0.0 install ok installed mime-support mime-support 3.66 install ok installed mount mount 2.36.1-8+deb11u1 install ok installed ncurses-base ncurses-base 6.2+20201114-2+deb11u2 install ok installed ncurses-bin ncurses-bin 6.2+20201114-2+deb11u2 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl perl 5.32.1-4+deb11u3 install ok installed perl-base perl-base 5.32.1-4+deb11u3 install ok installed perl-modules-5.32 perl-modules-5.32 5.32.1-4+deb11u3 install ok installed python-matplotlib-data python-matplotlib-data 3.3.4-1 install ok installed python3 python3 3.9.2-3 install ok installed python3-cycler python3-cycler 0.10.0-3 install ok installed python3-dateutil python3-dateutil 2.8.1-6 install ok installed python3-decorator python3-decorator 4.4.2-2 install ok installed python3-kiwisolver python3-kiwisolver 1.3.1-1+b1 install ok installed python3-matplotlib python3-matplotlib 3.3.4-1 install ok installed python3-minimal python3-minimal 3.9.2-3 install ok installed python3-numpy python3-numpy 1:1.19.5-1 install ok installed python3-pandas python3-pandas 1.1.5+dfsg-2 install ok installed python3-pandas-lib:amd64 python3-pandas-lib 1.1.5+dfsg-2 install ok installed python3-patsy python3-patsy 0.5.1-3 install ok installed python3-pil:amd64 python3-pil 8.1.2+dfsg-0.3+deb11u1 install ok installed python3-pkg-resources python3-pkg-resources 52.0.0-4 install ok installed python3-pubsub python3-pubsub 4.0.3-4 install ok installed python3-pyparsing python3-pyparsing 2.4.7-1 install ok installed python3-scipy python3-scipy 1.6.0-2 install ok installed python3-six python3-six 1.16.0-2 install ok installed python3-statsmodels python3-statsmodels 0.12.2-1 install ok installed python3-statsmodels-lib:amd64 python3-statsmodels-lib 0.12.2-1 install ok installed python3-tz python3-tz 2021.1-1 install ok installed python3-wxgtk4.0 python3-wxgtk4.0 4.0.7+dfsg-10 install ok installed python3.9 python3.9 3.9.2-1 install ok installed python3.9-minimal python3.9-minimal 3.9.2-1 install ok installed readline-common readline-common 8.1-1 install ok installed sed sed 4.7-1 install ok installed sensible-utils sensible-utils 0.0.14 install ok installed shared-mime-info shared-mime-info 2.0-1 install ok installed systemd systemd 247.3-7+deb11u4 install ok installed systemd-sysv systemd-sysv 247.3-7+deb11u4 install ok installed sysvinit-utils sysvinit-utils 2.96-7+deb11u1 install ok installed tar tar 1.34+dfsg-1+deb11u1 install ok installed tnseq-transit tnseq-transit 3.2.1-1 install ok installed ttf-bitstream-vera ttf-bitstream-vera 1.10-8.1 install ok installed tzdata tzdata 2021a-1+deb11u11 install ok installed ucf ucf 3.0043 install ok installed util-linux util-linux 2.36.1-8+deb11u1 install ok installed x11-common x11-common 1:7.7+22 install ok installed xkb-data xkb-data 2.29-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2+deb11u2 1m36.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m36.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', 'remove', 'adwaita-icon-theme', 'bwa', 'dbus', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'dmsetup', 'fontconfig', 'fontconfig-config', 'fonts-lyx', 'glib-networking:amd64', 'glib-networking-common', 'glib-networking-services', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'libapparmor1:amd64', 'libargon2-1:amd64', 'libatk-bridge2.0-0:amd64', 'libatk1.0-0:amd64', 'libatk1.0-data', 'libatspi2.0-0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcolord2:amd64', 'libcryptsetup12:amd64', 'libcups2:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdeflate0:amd64', 'libdevmapper1.02.1:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf-xlib-2.0-0:amd64', 'libgdk-pixbuf2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgraphite2-3:amd64', 'libgtk-3-0:amd64', 'libgtk-3-common', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu67:amd64', 'libimagequant0:amd64', 'libip4tc2:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjson-c5:amd64', 'libjson-glib-1.0-0:amd64', 'libjson-glib-1.0-common', 'libkmod2:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libllvm11:amd64', 'libmd0:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnotify4:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libperl5.32:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libproxy1v5:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librest-0.7-0:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsm6:amd64', 'libsoup-gnome2.4-1:amd64', 'libsoup2.4-1:amd64', 'libsqlite3-0:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwxbase3.0-0v5:amd64', 'libwxgtk3.0-gtk3-0v5:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml2:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'mailcap', 'media-types', 'mime-support', 'perl', 'perl-modules-5.32', 'python-matplotlib-data', 'python3', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-kiwisolver', 'python3-matplotlib', 'python3-minimal', 'python3-numpy', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-patsy', 'python3-pil:amd64', 'python3-pkg-resources', 'python3-pubsub', 'python3-pyparsing', 'python3-scipy', 'python3-six', 'python3-statsmodels', 'python3-statsmodels-lib:amd64', 'python3-tz', 'python3-wxgtk4.0', 'python3.9', 'python3.9-minimal', 'readline-common', 'sensible-utils', 'shared-mime-info', 'systemd', 'systemd-sysv', 'ttf-bitstream-vera', 'ucf', 'x11-common', 'xkb-data', 'tnseq-transit'] 1m43.4s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: adwaita-icon-theme bwa dbus dbus-user-session dconf-gsettings-backend dconf-service dmsetup fontconfig fontconfig-config fonts-lyx glib-networking glib-networking-common glib-networking-services gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme libapparmor1 libargon2-1 libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libbrotli1 libbsd0 libcairo-gobject2 libcairo2 libcap2 libcolord2 libcryptsetup12 libcups2 libdatrie1 libdbus-1-3 libdconf1 libdeflate0 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libepoxy0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgdbm-compat4 libgdbm6 libgdk-pixbuf-2.0-0 libgdk-pixbuf-xlib-2.0-0 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0 libgtk-3-common libharfbuzz0b libice6 libicu67 libimagequant0 libip4tc2 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libjson-c5 libjson-glib-1.0-0 libjson-glib-1.0-common libkmod2 liblapack3 liblbfgsb0 liblcms2-2 libllvm11 libmd0 libmpdec3 libncursesw6 libnotify4 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libperl5.32 libpixman-1-0 libpng16-16 libproxy1v5 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 librest-0.7-0 libsensors-config libsensors5 libsm6 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-0 libthai-data libthai0 libtiff5 libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwebpdemux2 libwebpmux3 libwxbase3.0-0v5 libwxgtk3.0-gtk3-0v5 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxrandr2 libxrender1 libxshmfence1 libxxf86vm1 libz3-4 mailcap media-types mime-support perl perl-modules-5.32 python-matplotlib-data python3 python3-cycler python3-dateutil python3-decorator python3-kiwisolver python3-matplotlib python3-minimal python3-numpy python3-pandas python3-pandas-lib python3-patsy python3-pil python3-pkg-resources python3-pubsub python3-pyparsing python3-scipy python3-six python3-statsmodels python3-statsmodels-lib python3-tz python3-wxgtk4.0 python3.9 python3.9-minimal readline-common sensible-utils shared-mime-info systemd systemd-sysv tnseq-transit ttf-bitstream-vera ucf x11-common xkb-data 0 upgraded, 0 newly installed, 191 to remove and 0 not upgraded. After this operation, 703 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 25800 files and directories currently installed.) Removing tnseq-transit (3.2.1-1) ... Removing python3-wxgtk4.0 (4.0.7+dfsg-10) ... Removing libwxgtk3.0-gtk3-0v5:amd64 (3.0.5.1+dfsg-2) ... Removing libgtk-3-0:amd64 (3.24.24-4+deb11u3) ... Removing adwaita-icon-theme (3.38.0-1) ... Removing bwa (0.7.17-6+b1) ... Removing libgtk-3-common (3.24.24-4+deb11u3) ... Removing librest-0.7-0:amd64 (0.8.1-1.1) ... Removing libsoup-gnome2.4-1:amd64 (2.72.0-2) ... Removing libsoup2.4-1:amd64 (2.72.0-2) ... Removing glib-networking:amd64 (2.66.0-2) ... Removing gsettings-desktop-schemas (3.38.0-2) ... Removing dconf-gsettings-backend:amd64 (0.38.0-2) ... Removing dconf-service (0.38.0-2) ... Removing dbus-user-session (1.12.28-0+deb11u1) ... Removing libpam-systemd:amd64 (247.3-7+deb11u4) ... Removing dbus (1.12.28-0+deb11u1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of stop. Removing systemd-sysv (247.3-7+deb11u4) ... Removing systemd (247.3-7+deb11u4) ... Removing libcryptsetup12:amd64 (2:2.3.7-1+deb11u1) ... Removing libpangocairo-1.0-0:amd64 (1.46.2-3) ... Removing libpangoft2-1.0-0:amd64 (1.46.2-3) ... Removing libpango-1.0-0:amd64 (1.46.2-3) ... Removing fontconfig (2.13.1-4.2) ... Removing libcairo-gobject2:amd64 (1.16.0-5) ... Removing libcairo2:amd64 (1.16.0-5) ... Removing libfontconfig1:amd64 (2.13.1-4.2) ... Removing fontconfig-config (2.13.1-4.2) ... Removing python3-matplotlib (3.3.4-1) ... Removing python-matplotlib-data (3.3.4-1) ... Removing fonts-lyx (2.3.6-1) ... dpkg: warning: while removing fonts-lyx, directory '/usr/share/fonts/truetype/lyx' not empty so not removed Removing glib-networking-services (2.66.0-2) ... dpkg: warning: while removing glib-networking-services, directory '/usr/lib/systemd' not empty so not removed Removing glib-networking-common (2.66.0-2) ... Removing gtk-update-icon-cache (3.24.24-4+deb11u3) ... Removing hicolor-icon-theme (0.17-2) ... Removing libapparmor1:amd64 (2.13.6-10) ... Removing libargon2-1:amd64 (0~20171227-0.2) ... Removing libatk-bridge2.0-0:amd64 (2.38.0-1) ... Removing libatk1.0-0:amd64 (2.36.0-2) ... Removing libatk1.0-data (2.36.0-2) ... Removing libatspi2.0-0:amd64 (2.38.0-4+deb11u1) ... Removing libcups2:amd64 (2.3.3op2-3+deb11u6) ... Removing libavahi-client3:amd64 (0.8-5+deb11u2) ... Removing libavahi-common3:amd64 (0.8-5+deb11u2) ... Removing libavahi-common-data:amd64 (0.8-5+deb11u2) ... Removing python3-statsmodels (0.12.2-1) ... Removing python3-scipy (1.6.0-2) ... Removing python3-statsmodels-lib:amd64 (0.12.2-1) ... Removing python3-pandas (1.1.5+dfsg-2) ... Removing python3-pandas-lib:amd64 (1.1.5+dfsg-2) ... Removing python3-patsy (0.5.1-3) ... Removing python3-numpy (1:1.19.5-1) ... Removing liblbfgsb0:amd64 (3.0+dfsg.3-9) ... Removing liblapack3:amd64 (3.9.0-3+deb11u1) ... Removing libblas3:amd64 (3.9.0-3+deb11u1) ... Removing python3-pil:amd64 (8.1.2+dfsg-0.3+deb11u1) ... Removing libharfbuzz0b:amd64 (2.7.4-1) ... Removing libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Removing libbrotli1:amd64 (1.0.9-2+b2) ... Removing libgl1:amd64 (1.3.2-1) ... Removing libglx0:amd64 (1.3.2-1) ... Removing libglx-mesa0:amd64 (20.3.5-1) ... Removing libx11-xcb1:amd64 (2:1.7.2-1+deb11u2) ... Removing libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Removing libxcb-xfixes0:amd64 (1.14-3) ... Removing libsm6:amd64 (2:1.2.3-1) ... Removing libice6:amd64 (2:1.0.10-1) ... Removing libcap2:amd64 (1:2.44-1) ... Removing libcolord2:amd64 (1.4.5-3) ... Removing libthai0:amd64 (0.1.28-3) ... Removing libdatrie1:amd64 (0.2.13-1) ... Removing libdbus-1-3:amd64 (1.12.28-0+deb11u1) ... Removing libdconf1:amd64 (0.38.0-2) ... Removing libnotify4:amd64 (0.7.9-3) ... Removing libgdk-pixbuf2.0-0:amd64 (2.40.2-2) ... Removing libgl1-mesa-dri:amd64 (20.3.5-1) ... Removing libdrm-amdgpu1:amd64 (2.4.104-1) ... Removing libdrm-intel1:amd64 (2.4.104-1) ... Removing libdrm-radeon1:amd64 (2.4.104-1) ... Removing libdrm-nouveau2:amd64 (2.4.104-1) ... Removing libllvm11:amd64 (1:11.0.1-2) ... Removing libedit2:amd64 (3.1-20191231-2+b1) ... Removing libelf1:amd64 (0.183-1) ... Removing libepoxy0:amd64 (1.5.5-1) ... Removing libwxbase3.0-0v5:amd64 (3.0.5.1+dfsg-2) ... Removing python3-kiwisolver (1.3.1-1+b1) ... Removing python3-dateutil (2.8.1-6) ... Removing libfribidi0:amd64 (1.0.8-2+deb11u1) ... Removing mime-support (3.66) ... Removing mailcap (3.69) ... Removing perl (5.32.1-4+deb11u3) ... Removing libperl5.32:amd64 (5.32.1-4+deb11u3) ... Removing libgdbm-compat4:amd64 (1.19-2) ... Removing libgdbm6:amd64 (1.19-2) ... Removing libgdk-pixbuf-xlib-2.0-0:amd64 (2.40.2-2) ... Removing libgfortran5:amd64 (10.2.1-6) ... Removing libglapi-mesa:amd64 (20.3.5-1) ... Removing libjson-glib-1.0-0:amd64 (1.6.2-1) ... Removing libglvnd0:amd64 (1.3.2-1) ... Removing libgraphite2-3:amd64 (1.3.14-1) ... Removing libimagequant0:amd64 (2.12.2-1.1) ... Removing libip4tc2:amd64 (1.8.7-1) ... Removing libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) ... Removing libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Removing libjson-c5:amd64 (0.15-2+deb11u1) ... Removing libjson-glib-1.0-common (1.6.2-1) ... Removing libkmod2:amd64 (28-1) ... Removing liblcms2-2:amd64 (2.12~rc1-2) ... Removing libpciaccess0:amd64 (0.16-1) ... Removing libpixman-1-0:amd64 (0.40.0-1.1~deb11u1) ... Removing libproxy1v5:amd64 (0.4.17-1) ... Removing libpsl5:amd64 (0.21.0-1.2) ... Removing libquadmath0:amd64 (10.2.1-6) ... Removing libsensors5:amd64 (1:3.6.0-7) ... Removing libsensors-config (1:3.6.0-7) ... Removing libthai-data (0.1.28-3) ... Removing libvulkan1:amd64 (1.2.162.0-1) ... Removing libwayland-cursor0:amd64 (1.18.0-2~exp1.1) ... Removing libwayland-client0:amd64 (1.18.0-2~exp1.1) ... Removing libwayland-egl1:amd64 (1.18.0-2~exp1.1) ... Removing libwebpmux3:amd64 (0.6.1-2.1+deb11u2) ... Removing libwebpdemux2:amd64 (0.6.1-2.1+deb11u2) ... Removing libxcb-dri2-0:amd64 (1.14-3) ... Removing libxcb-dri3-0:amd64 (1.14-3) ... Removing libxcb-glx0:amd64 (1.14-3) ... Removing libxcb-present0:amd64 (1.14-3) ... Removing libxcb-render0:amd64 (1.14-3) ... Removing libxcb-shm0:amd64 (1.14-3) ... Removing libxcb-sync1:amd64 (1.14-3) ... Removing libxcomposite1:amd64 (1:0.4.5-1) ... Removing libxcursor1:amd64 (1:1.2.0-2) ... Removing libxdamage1:amd64 (1:1.1.5-2) ... Removing libxrandr2:amd64 (2:1.5.1-1) ... Removing libxfixes3:amd64 (1:5.0.3-2) ... Removing libxi6:amd64 (2:1.7.10-1) ... Removing libxinerama1:amd64 (2:1.1.4-2) ... Removing libxkbcommon0:amd64 (1.0.3-2) ... Removing libxrender1:amd64 (1:0.9.10-1) ... Removing libxshmfence1:amd64 (1.3-1) ... Removing libz3-4:amd64 (4.8.10-1) ... Removing perl-modules-5.32 (5.32.1-4+deb11u3) ... Removing python3-cycler (0.10.0-3) ... Removing python3-decorator (4.4.2-2) ... Removing python3-pkg-resources (52.0.0-4) ... Removing python3-pubsub (4.0.3-4) ... Removing python3-pyparsing (2.4.7-1) ... Removing python3-tz (2021.1-1) ... Removing ucf (3.0043) ... Removing sensible-utils (0.0.14) ... Removing ttf-bitstream-vera (1.10-8.1) ... dpkg: warning: while removing ttf-bitstream-vera, directory '/usr/share/fonts/truetype/ttf-bitstream-vera' not empty so not removed Removing x11-common (1:7.7+22) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing xkb-data (2.29-2) ... Removing libgdk-pixbuf-2.0-0:amd64 (2.42.2+dfsg-1+deb11u1) ... Removing libtiff5:amd64 (4.2.0-1+deb11u5) ... Removing libdeflate0:amd64 (1.7-1) ... Removing libdrm2:amd64 (2.4.104-1) ... Removing libdrm-common (2.4.104-1) ... Removing python3-six (1.16.0-2) ... Removing python3 (3.9.2-3) ... Removing python3-minimal (3.9.2-3) ... Removing python3.9 (3.9.2-1) ... Removing libpython3-stdlib:amd64 (3.9.2-3) ... Removing libpython3.9-stdlib:amd64 (3.9.2-1) ... find: '/usr/lib/python3': No such file or directory Removing libgdk-pixbuf2.0-common (2.42.2+dfsg-1+deb11u1) ... Removing shared-mime-info (2.0-1) ... Removing libglib2.0-0:amd64 (2.66.8-1+deb11u1) ... Removing libxml2:amd64 (2.9.10+dfsg-6.7+deb11u4) ... Removing libicu67:amd64 (67.1-7) ... Removing libjbig0:amd64 (2.1-3.1+b2) ... Removing libjpeg62-turbo:amd64 (1:2.0.6-4) ... Removing libmpdec3:amd64 (2.5.1-1) ... Removing libncursesw6:amd64 (6.2+20201114-2+deb11u2) ... Removing libpng16-16:amd64 (1.6.37-3) ... Removing libreadline8:amd64 (8.1-1) ... Removing libsqlite3-0:amd64 (3.34.1-3) ... Removing libwebp6:amd64 (0.6.1-2.1+deb11u2) ... Removing libxext6:amd64 (2:1.3.3-1.1) ... Removing media-types (4.0.0) ... Removing readline-common (8.1-1) ... Removing libx11-6:amd64 (2:1.7.2-1+deb11u2) ... Removing libxcb1:amd64 (1.14-3) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.11.3-1+deb11u1) ... Removing python3.9-minimal (3.9.2-1) ... Removing libexpat1:amd64 (2.2.10-2+deb11u5) ... Removing libmd0:amd64 (1.0.3-3) ... Removing libpython3.9-minimal:amd64 (3.9.2-1) ... find: '/usr/lib/python3': No such file or directory Removing libx11-data (2:1.7.2-1+deb11u2) ... Removing libxau6:amd64 (1:1.0.9-1) ... Removing dmsetup (2:1.02.175-2.1) ... Removing libdevmapper1.02.1:amd64 (2:1.02.175-2.1) ... Processing triggers for libc-bin (2.31-13+deb11u7) ... 1m43.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', 'remove', 'adwaita-icon-theme', 'bwa', 'dbus', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'dmsetup', 'fontconfig', 'fontconfig-config', 'fonts-lyx', 'glib-networking:amd64', 'glib-networking-common', 'glib-networking-services', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'libapparmor1:amd64', 'libargon2-1:amd64', 'libatk-bridge2.0-0:amd64', 'libatk1.0-0:amd64', 'libatk1.0-data', 'libatspi2.0-0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcolord2:amd64', 'libcryptsetup12:amd64', 'libcups2:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdeflate0:amd64', 'libdevmapper1.02.1:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf-xlib-2.0-0:amd64', 'libgdk-pixbuf2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgraphite2-3:amd64', 'libgtk-3-0:amd64', 'libgtk-3-common', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu67:amd64', 'libimagequant0:amd64', 'libip4tc2:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjson-c5:amd64', 'libjson-glib-1.0-0:amd64', 'libjson-glib-1.0-common', 'libkmod2:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libllvm11:amd64', 'libmd0:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnotify4:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libperl5.32:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libproxy1v5:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librest-0.7-0:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsm6:amd64', 'libsoup-gnome2.4-1:amd64', 'libsoup2.4-1:amd64', 'libsqlite3-0:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwxbase3.0-0v5:amd64', 'libwxgtk3.0-gtk3-0v5:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml2:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'mailcap', 'media-types', 'mime-support', 'perl', 'perl-modules-5.32', 'python-matplotlib-data', 'python3', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-kiwisolver', 'python3-matplotlib', 'python3-minimal', 'python3-numpy', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-patsy', 'python3-pil:amd64', 'python3-pkg-resources', 'python3-pubsub', 'python3-pyparsing', 'python3-scipy', 'python3-six', 'python3-statsmodels', 'python3-statsmodels-lib:amd64', 'python3-tz', 'python3-wxgtk4.0', 'python3.9', 'python3.9-minimal', 'readline-common', 'sensible-utils', 'shared-mime-info', 'systemd', 'systemd-sysv', 'ttf-bitstream-vera', 'ucf', 'x11-common', 'xkb-data', 'tnseq-transit'] 1m43.4s INFO: Running scripts post_remove 1m43.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_remove_exceptions'] 1m43.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_remove_exceptions'] 1m43.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg', '--purge', 'adwaita-icon-theme', 'bwa', 'dbus', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'dmsetup', 'fontconfig', 'fontconfig-config', 'fonts-lyx', 'glib-networking:amd64', 'glib-networking-common', 'glib-networking-services', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'libapparmor1:amd64', 'libargon2-1:amd64', 'libatk-bridge2.0-0:amd64', 'libatk1.0-0:amd64', 'libatk1.0-data', 'libatspi2.0-0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcolord2:amd64', 'libcryptsetup12:amd64', 'libcups2:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdeflate0:amd64', 'libdevmapper1.02.1:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf-xlib-2.0-0:amd64', 'libgdk-pixbuf2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgraphite2-3:amd64', 'libgtk-3-0:amd64', 'libgtk-3-common', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu67:amd64', 'libimagequant0:amd64', 'libip4tc2:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjson-c5:amd64', 'libjson-glib-1.0-0:amd64', 'libjson-glib-1.0-common', 'libkmod2:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libllvm11:amd64', 'libmd0:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnotify4:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libperl5.32:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libproxy1v5:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librest-0.7-0:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsm6:amd64', 'libsoup-gnome2.4-1:amd64', 'libsoup2.4-1:amd64', 'libsqlite3-0:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwxbase3.0-0v5:amd64', 'libwxgtk3.0-gtk3-0v5:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml2:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'mailcap', 'media-types', 'mime-support', 'perl', 'perl-modules-5.32', 'python-matplotlib-data', 'python3', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-kiwisolver', 'python3-matplotlib', 'python3-minimal', 'python3-numpy', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-patsy', 'python3-pil:amd64', 'python3-pkg-resources', 'python3-pubsub', 'python3-pyparsing', 'python3-scipy', 'python3-six', 'python3-statsmodels', 'python3-statsmodels-lib:amd64', 'python3-tz', 'python3-wxgtk4.0', 'python3.9', 'python3.9-minimal', 'readline-common', 'sensible-utils', 'shared-mime-info', 'systemd', 'systemd-sysv', 'ttf-bitstream-vera', 'ucf', 'x11-common', 'xkb-data'] 1m44.4s DUMP: (Reading database ... 6726 files and directories currently installed.) Purging configuration files for adwaita-icon-theme (3.38.0-1) ... dpkg: warning: ignoring request to remove bwa which isn't installed Purging configuration files for dbus (1.12.28-0+deb11u1) ... rmdir: failed to remove '/var/run/dbus': No such file or directory Purging configuration files for dbus-user-session (1.12.28-0+deb11u1) ... dpkg: warning: ignoring request to remove dconf-gsettings-backend which isn't installed dpkg: warning: ignoring request to remove dconf-service which isn't installed dpkg: warning: ignoring request to remove dmsetup which isn't installed Purging configuration files for fontconfig (2.13.1-4.2) ... Purging configuration files for fontconfig-config (2.13.1-4.2) ... dpkg: warning: ignoring request to remove fonts-lyx which isn't installed dpkg: warning: ignoring request to remove glib-networking which isn't installed dpkg: warning: ignoring request to remove glib-networking-common which isn't installed dpkg: warning: ignoring request to remove glib-networking-services which isn't installed dpkg: warning: ignoring request to remove gsettings-desktop-schemas which isn't installed dpkg: warning: ignoring request to remove gtk-update-icon-cache which isn't installed dpkg: warning: ignoring request to remove hicolor-icon-theme which isn't installed dpkg: warning: ignoring request to remove libapparmor1 which isn't installed dpkg: warning: ignoring request to remove libargon2-1 which isn't installed dpkg: warning: ignoring request to remove libatk-bridge2.0-0 which isn't installed dpkg: warning: ignoring request to remove libatk1.0-0 which isn't installed dpkg: warning: ignoring request to remove libatk1.0-data which isn't installed dpkg: warning: ignoring request to remove libatspi2.0-0 which isn't installed dpkg: warning: ignoring request to remove libavahi-client3 which isn't installed dpkg: warning: ignoring request to remove libavahi-common-data which isn't installed dpkg: warning: ignoring request to remove libavahi-common3 which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libcairo-gobject2 which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcap2 which isn't installed dpkg: warning: ignoring request to remove libcolord2 which isn't installed dpkg: warning: ignoring request to remove libcryptsetup12 which isn't installed dpkg: warning: ignoring request to remove libcups2 which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libdbus-1-3 which isn't installed dpkg: warning: ignoring request to remove libdconf1 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libdevmapper1.02.1 which isn't installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which isn't installed dpkg: warning: ignoring request to remove libdrm-common which isn't installed dpkg: warning: ignoring request to remove libdrm-intel1 which isn't installed dpkg: warning: ignoring request to remove libdrm-nouveau2 which isn't installed dpkg: warning: ignoring request to remove libdrm-radeon1 which isn't installed dpkg: warning: ignoring request to remove libdrm2 which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libelf1 which isn't installed dpkg: warning: ignoring request to remove libepoxy0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libgdbm-compat4 which isn't installed dpkg: warning: ignoring request to remove libgdbm6 which isn't installed Purging configuration files for libgdk-pixbuf-2.0-0:amd64 (2.42.2+dfsg-1+deb11u1) ... dpkg: warning: ignoring request to remove libgdk-pixbuf-xlib-2.0-0 which isn't installed dpkg: warning: ignoring request to remove libgdk-pixbuf2.0-0 which isn't installed dpkg: warning: ignoring request to remove libgdk-pixbuf2.0-common which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove libgl1 which isn't installed Purging configuration files for libgl1-mesa-dri:amd64 (20.3.5-1) ... dpkg: warning: ignoring request to remove libglapi-mesa which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.66.8-1+deb11u1) ... dpkg: warning: ignoring request to remove libglvnd0 which isn't installed dpkg: warning: ignoring request to remove libglx-mesa0 which isn't installed dpkg: warning: ignoring request to remove libglx0 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgtk-3-0:amd64 (3.24.24-4+deb11u3) ... Purging configuration files for libgtk-3-common (3.24.24-4+deb11u3) ... dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu67 which isn't installed dpkg: warning: ignoring request to remove libimagequant0 which isn't installed dpkg: warning: ignoring request to remove libip4tc2 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed Purging configuration files for libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Purging configuration files for libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) ... dpkg: warning: ignoring request to remove libjson-c5 which isn't installed dpkg: warning: ignoring request to remove libjson-glib-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libjson-glib-1.0-common which isn't installed dpkg: warning: ignoring request to remove libkmod2 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblbfgsb0 which isn't installed dpkg: warning: ignoring request to remove liblcms2-2 which isn't installed dpkg: warning: ignoring request to remove libllvm11 which isn't installed dpkg: warning: ignoring request to remove libmd0 which isn't installed dpkg: warning: ignoring request to remove libmpdec3 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnotify4 which isn't installed dpkg: warning: ignoring request to remove libpam-systemd which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libperl5.32 which isn't installed dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libproxy1v5 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed Purging configuration files for libpython3.9-minimal:amd64 (3.9.2-1) ... dpkg: warning: ignoring request to remove libpython3.9-stdlib which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librest-0.7-0 which isn't installed Purging configuration files for libsensors-config (1:3.6.0-7) ... dpkg: warning: ignoring request to remove libsensors5 which isn't installed dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libsoup-gnome2.4-1 which isn't installed dpkg: warning: ignoring request to remove libsoup2.4-1 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtiff5 which isn't installed dpkg: warning: ignoring request to remove libvulkan1 which isn't installed dpkg: warning: ignoring request to remove libwayland-client0 which isn't installed dpkg: warning: ignoring request to remove libwayland-cursor0 which isn't installed dpkg: warning: ignoring request to remove libwayland-egl1 which isn't installed dpkg: warning: ignoring request to remove libwebp6 which isn't installed dpkg: warning: ignoring request to remove libwebpdemux2 which isn't installed dpkg: warning: ignoring request to remove libwebpmux3 which isn't installed dpkg: warning: ignoring request to remove libwxbase3.0-0v5 which isn't installed dpkg: warning: ignoring request to remove libwxgtk3.0-gtk3-0v5 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libx11-xcb1 which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri2-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri3-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-glx0 which isn't installed dpkg: warning: ignoring request to remove libxcb-present0 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb-sync1 which isn't installed dpkg: warning: ignoring request to remove libxcb-xfixes0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxcomposite1 which isn't installed dpkg: warning: ignoring request to remove libxcursor1 which isn't installed dpkg: warning: ignoring request to remove libxdamage1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxfixes3 which isn't installed dpkg: warning: ignoring request to remove libxi6 which isn't installed dpkg: warning: ignoring request to remove libxinerama1 which isn't installed dpkg: warning: ignoring request to remove libxkbcommon0 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxrandr2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxshmfence1 which isn't installed dpkg: warning: ignoring request to remove libxxf86vm1 which isn't installed dpkg: warning: ignoring request to remove libz3-4 which isn't installed Purging configuration files for mailcap (3.69) ... Purging configuration files for media-types (4.0.0) ... dpkg: warning: ignoring request to remove mime-support which isn't installed Purging configuration files for perl (5.32.1-4+deb11u3) ... dpkg: warning: ignoring request to remove perl-modules-5.32 which isn't installed Purging configuration files for python-matplotlib-data (3.3.4-1) ... Purging configuration files for python3 (3.9.2-3) ... dpkg: warning: ignoring request to remove python3-cycler which isn't installed dpkg: warning: ignoring request to remove python3-dateutil which isn't installed dpkg: warning: ignoring request to remove python3-decorator which isn't installed dpkg: warning: ignoring request to remove python3-kiwisolver which isn't installed dpkg: warning: ignoring request to remove python3-matplotlib which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-pandas which isn't installed dpkg: warning: ignoring request to remove python3-pandas-lib which isn't installed dpkg: warning: ignoring request to remove python3-patsy which isn't installed dpkg: warning: ignoring request to remove python3-pil which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-pubsub which isn't installed dpkg: warning: ignoring request to remove python3-pyparsing which isn't installed dpkg: warning: ignoring request to remove python3-scipy which isn't installed dpkg: warning: ignoring request to remove python3-six which isn't installed dpkg: warning: ignoring request to remove python3-statsmodels which isn't installed dpkg: warning: ignoring request to remove python3-statsmodels-lib which isn't installed dpkg: warning: ignoring request to remove python3-tz which isn't installed dpkg: warning: ignoring request to remove python3-wxgtk4.0 which isn't installed dpkg: warning: ignoring request to remove python3.9 which isn't installed Purging configuration files for python3.9-minimal (3.9.2-1) ... Purging configuration files for readline-common (8.1-1) ... dpkg: warning: ignoring request to remove sensible-utils which isn't installed Purging configuration files for shared-mime-info (2.0-1) ... Purging configuration files for systemd (247.3-7+deb11u4) ... dpkg: warning: ignoring request to remove systemd-sysv which isn't installed dpkg: warning: ignoring request to remove ttf-bitstream-vera which isn't installed Purging configuration files for ucf (3.0043) ... Purging configuration files for x11-common (1:7.7+22) ... dpkg: warning: ignoring request to remove xkb-data which isn't installed 1m44.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg', '--purge', 'adwaita-icon-theme', 'bwa', 'dbus', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'dmsetup', 'fontconfig', 'fontconfig-config', 'fonts-lyx', 'glib-networking:amd64', 'glib-networking-common', 'glib-networking-services', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'libapparmor1:amd64', 'libargon2-1:amd64', 'libatk-bridge2.0-0:amd64', 'libatk1.0-0:amd64', 'libatk1.0-data', 'libatspi2.0-0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcolord2:amd64', 'libcryptsetup12:amd64', 'libcups2:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdeflate0:amd64', 'libdevmapper1.02.1:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf-xlib-2.0-0:amd64', 'libgdk-pixbuf2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgraphite2-3:amd64', 'libgtk-3-0:amd64', 'libgtk-3-common', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu67:amd64', 'libimagequant0:amd64', 'libip4tc2:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjson-c5:amd64', 'libjson-glib-1.0-0:amd64', 'libjson-glib-1.0-common', 'libkmod2:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libllvm11:amd64', 'libmd0:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnotify4:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libperl5.32:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libproxy1v5:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librest-0.7-0:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsm6:amd64', 'libsoup-gnome2.4-1:amd64', 'libsoup2.4-1:amd64', 'libsqlite3-0:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwxbase3.0-0v5:amd64', 'libwxgtk3.0-gtk3-0v5:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml2:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'mailcap', 'media-types', 'mime-support', 'perl', 'perl-modules-5.32', 'python-matplotlib-data', 'python3', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-kiwisolver', 'python3-matplotlib', 'python3-minimal', 'python3-numpy', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-patsy', 'python3-pil:amd64', 'python3-pkg-resources', 'python3-pubsub', 'python3-pyparsing', 'python3-scipy', 'python3-six', 'python3-statsmodels', 'python3-statsmodels-lib:amd64', 'python3-tz', 'python3-wxgtk4.0', 'python3.9', 'python3.9-minimal', 'readline-common', 'sensible-utils', 'shared-mime-info', 'systemd', 'systemd-sysv', 'ttf-bitstream-vera', 'ucf', 'x11-common', 'xkb-data'] 1m44.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg', '--purge', 'tnseq-transit'] 1m44.4s DUMP: dpkg: warning: ignoring request to remove tnseq-transit which isn't installed 1m44.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg', '--purge', 'tnseq-transit'] 1m44.4s INFO: Running scripts post_purge 1m44.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_purge_exceptions'] 1m44.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_purge_exceptions'] 1m44.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg', '--purge', '--pending'] 1m44.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg', '--purge', '--pending'] 1m44.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg', '--remove', '--pending'] 1m44.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg', '--remove', '--pending'] 1m44.4s INFO: Running scripts post_test 1m44.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_test_exceptions'] 1m44.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'tmp/scripts/post_test_exceptions'] 1m44.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m44.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m44.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg-divert', '--list'] 1m44.8s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m44.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'dpkg-divert', '--list'] 1m44.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', 'clean'] 1m44.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4', 'apt-get', 'clean'] 1m44.9s DEBUG: Recording chroot state 1m45.5s INFO: Warning: Package purging left files on system: /usr/local/share/fonts/ not owned /usr/local/share/fonts/.uuid not owned /usr/share/fonts/ owned by: fonts-lyx, ttf-bitstream-vera /usr/share/fonts/.uuid not owned /usr/share/fonts/truetype/ owned by: fonts-lyx, ttf-bitstream-vera /usr/share/fonts/truetype/.uuid not owned /usr/share/fonts/truetype/lyx/ owned by: fonts-lyx /usr/share/fonts/truetype/lyx/.uuid not owned /usr/share/fonts/truetype/ttf-bitstream-vera/ owned by: ttf-bitstream-vera /usr/share/fonts/truetype/ttf-bitstream-vera/.uuid not owned 1m45.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/shm'] 1m45.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/shm'] 1m45.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/console'] 1m45.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/console'] 1m45.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/ptmx'] 1m45.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/ptmx'] 1m45.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/pts'] 1m45.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/dev/pts'] 1m45.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/proc'] 1m46.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4/proc'] 1m46.0s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m46.1s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpc01ewnr4'] 1m46.1s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpc01ewnr4 1m46.1s INFO: PASS: Upgrading between Debian distributions. 1m46.1s INFO: PASS: All tests. 1m46.1s INFO: piuparts run ends. ret=0 End: 2024-01-30 18:51:12 GMT