Start: 2024-10-29 06:16:01 GMT Package: python-chemfp Source: chemfp Version: 1.1p1-2.1 Installed-Size: 797 Maintainer: Debichem Team Architecture: amd64 Provides: python2.7-chemfp Depends: python (>= 2.7), python (<< 2.8), libc6 (>= 2.14), libgomp1 (>= 4.9) Recommends: python-openbabel, python-rdkit Description: cheminformatics fingerprints file formats and tools Homepage: http://code.google.com/p/chem-fingerprints/ Description-md5: 5c8f2d86b2131e71c3d9267261e49013 Section: python Priority: optional Filename: pool/main/c/chemfp/python-chemfp_1.1p1-2.1_amd64.deb Size: 163182 MD5sum: e1fd2af35ac0ded71d4374acd506a3b2 SHA256: 2b1d26fbfeb48ebf37bece5b0f4b26e26588e0807fc9a785947d9eb813276bdb Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-debsums-errors --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz -d buster --no-upgrade-test --apt python-chemfp=1.1p1-2.1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-debsums-errors --warn-on-usr-move fail --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz -d buster --no-upgrade-test --apt python-chemfp=1.1p1-2.1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpwyk2ahnr 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpwyk2ahnr 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ buster main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpwyk2ahnr/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', 'update'] 0m1.8s DUMP: Hit:1 http://deb.debian.org/debian buster InRelease Reading package lists... 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', 'update'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', '-yf', 'dist-upgrade'] 0m2.2s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', '-yf', 'dist-upgrade'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.6s DUMP: f6fc0f2636004ef589309651dfd778f4 - 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.6s INFO: Running scripts post_setup 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_dummy_users'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_dummy_users'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_forbid_home'] 0m3.6s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_forbid_home'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.6s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_minimize'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_minimize'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_zz_backports'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_setup_zz_backports'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', 'clean'] 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', 'clean'] 0m3.7s DEBUG: Recording chroot state 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.3s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 1.8.2.3 install ok installed base-files base-files 10.3+deb10u13 install ok installed base-passwd base-passwd 3.5.46 install ok installed bash bash 5.0-4 install ok installed bsdutils bsdutils 1:2.33.1-0.1 install ok installed coreutils coreutils 8.30-3 install ok installed dash dash 0.5.10.2-5 install ok installed debconf debconf 1.5.71+deb10u1 install ok installed debian-archive-keyring debian-archive-keyring 2019.1+deb10u1 install ok installed debianutils debianutils 4.8.6.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.8 install ok installed e2fsprogs e2fsprogs 1.44.5-1+deb10u3 install ok installed fdisk fdisk 2.33.1-0.1 install ok installed findutils findutils 4.6.0+git+20190209-2 install ok installed gcc-8-base:amd64 gcc-8-base 8.3.0-6 install ok installed gpgv gpgv 2.2.12-1+deb10u2 install ok installed grep grep 3.3-1 install ok installed gzip gzip 1.9-3+deb10u1 install ok installed hostname hostname 3.21 install ok installed init-system-helpers init-system-helpers 1.56+nmu1 install ok installed libacl1:amd64 libacl1 2.2.53-4 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.3 install ok installed libattr1:amd64 libattr1 1:2.4.48-4 install ok installed libaudit-common libaudit-common 1:2.8.4-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.4-3 install ok installed libblkid1:amd64 libblkid1 2.33.1-0.1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u1 install ok installed libc-bin libc-bin 2.28-10+deb10u1 install ok installed libc6:amd64 libc6 2.28-10+deb10u1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5+deb10u1 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4+deb10u1 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u8 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1+deb10u1 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1+deb10u1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+deb10u1 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u2 install ok installed libnettle6:amd64 libnettle6 3.4.1-1+deb10u1 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2+deb10u1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u8 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u2 install ok installed libudev1:amd64 libudev1 241-7~deb10u8 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3+deb10u2 install ok installed login login 1:4.5-1.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.33.1-0.1 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u2 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u2 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed tzdata tzdata 2021a-0+deb10u6 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1+deb10u1 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg-divert', '--list'] 0m4.3s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg-divert', '--list'] 0m4.3s INFO: Running scripts is_testable 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/is_testable_uninstallable'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/is_testable_uninstallable'] 0m4.3s INFO: apt-cache does not know about any of the requested packages 0m4.3s INFO: Running scripts pre_test 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_test_exceptions'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_test_exceptions'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_test_root_password'] 0m4.4s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_test_root_password'] 0m4.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m4.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m5.8s DEBUG: No broken symlinks as far as we can find. 0m5.8s INFO: Running scripts pre_install 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_database-server'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_database-server'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_exceptions'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_exceptions'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_extras'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_extras'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m6.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m7.3s DEBUG: No broken symlinks as far as we can find. 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-cache', 'policy'] 0m8.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian buster/main amd64 Packages release v=10.13,o=Debian,a=oldoldstable,n=buster,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-cache', 'policy'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-cache', 'policy', 'python-chemfp'] 0m8.4s DUMP: python-chemfp: Installed: (none) Candidate: 1.1p1-2.1 Version table: 1.1p1-2.1 500 500 http://deb.debian.org/debian buster/main amd64 Packages 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-cache', 'policy', 'python-chemfp'] 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', '-y', 'install', 'python-chemfp=1.1p1-2.1'] 0m22.9s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: bzip2 file fontconfig-config fonts-dejavu-core fonts-freefont-ttf libblas3 libboost-python1.67.0 libboost-serialization1.67.0 libbsd0 libcairo2 libexpat1 libfontconfig1 libfreetype6 libgfortran5 libgomp1 libicu63 liblapack3 libmagic-mgc libmagic1 libopenbabel5 libpixman-1-0 libpng16-16 libpython-stdlib libpython2-stdlib libpython2.7 libpython2.7-minimal libpython2.7-stdlib libquadmath0 librdkit1 libreadline7 libschroedinger-coordgenlibs1 libschroedinger-maeparser1 libsqlite3-0 libssl1.1 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxrender1 mime-support python python-minimal python-numpy python-openbabel python-pkg-resources python-rdkit python2 python2-minimal python2.7 python2.7-minimal rdkit-data readline-common sensible-utils ucf xz-utils Suggested packages: bzip2-doc python3 python-doc python-tk gcc gfortran python-dev python-pytest python-numpy-dbg python-numpy-doc python-setuptools rdkit-doc python2-doc python2.7-doc binutils binfmt-support readline-doc The following NEW packages will be installed: bzip2 file fontconfig-config fonts-dejavu-core fonts-freefont-ttf libblas3 libboost-python1.67.0 libboost-serialization1.67.0 libbsd0 libcairo2 libexpat1 libfontconfig1 libfreetype6 libgfortran5 libgomp1 libicu63 liblapack3 libmagic-mgc libmagic1 libopenbabel5 libpixman-1-0 libpng16-16 libpython-stdlib libpython2-stdlib libpython2.7 libpython2.7-minimal libpython2.7-stdlib libquadmath0 librdkit1 libreadline7 libschroedinger-coordgenlibs1 libschroedinger-maeparser1 libsqlite3-0 libssl1.1 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxrender1 mime-support python python-chemfp python-minimal python-numpy python-openbabel python-pkg-resources python-rdkit python2 python2-minimal python2.7 python2.7-minimal rdkit-data readline-common sensible-utils ucf xz-utils 0 upgraded, 61 newly installed, 0 to remove and 0 not upgraded. Need to get 49.5 MB of archives. After this operation, 181 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian buster/main amd64 libpython2.7-minimal amd64 2.7.16-2+deb10u1 [395 kB] Get:2 http://deb.debian.org/debian buster/main amd64 python2.7-minimal amd64 2.7.16-2+deb10u1 [1369 kB] Get:3 http://deb.debian.org/debian buster/main amd64 python2-minimal amd64 2.7.16-1 [41.4 kB] Get:4 http://deb.debian.org/debian buster/main amd64 python-minimal amd64 2.7.16-1 [21.0 kB] Get:5 http://deb.debian.org/debian buster/main amd64 libssl1.1 amd64 1.1.1n-0+deb10u3 [1551 kB] Get:6 http://deb.debian.org/debian buster/main amd64 mime-support all 3.62 [37.2 kB] Get:7 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u4 [108 kB] Get:8 http://deb.debian.org/debian buster/main amd64 readline-common all 7.0-5 [70.6 kB] Get:9 http://deb.debian.org/debian buster/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:10 http://deb.debian.org/debian buster/main amd64 libsqlite3-0 amd64 3.27.2-3+deb10u1 [641 kB] Get:11 http://deb.debian.org/debian buster/main amd64 libpython2.7-stdlib amd64 2.7.16-2+deb10u1 [1912 kB] Get:12 http://deb.debian.org/debian buster/main amd64 python2.7 amd64 2.7.16-2+deb10u1 [305 kB] Get:13 http://deb.debian.org/debian buster/main amd64 libpython2-stdlib amd64 2.7.16-1 [20.8 kB] Get:14 http://deb.debian.org/debian buster/main amd64 libpython-stdlib amd64 2.7.16-1 [20.8 kB] Get:15 http://deb.debian.org/debian buster/main amd64 python2 amd64 2.7.16-1 [41.6 kB] Get:16 http://deb.debian.org/debian buster/main amd64 python amd64 2.7.16-1 [22.8 kB] Get:17 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:18 http://deb.debian.org/debian buster/main amd64 bzip2 amd64 1.0.6-9.2~deb10u1 [48.4 kB] Get:19 http://deb.debian.org/debian buster/main amd64 libmagic-mgc amd64 1:5.35-4+deb10u2 [242 kB] Get:20 http://deb.debian.org/debian buster/main amd64 libmagic1 amd64 1:5.35-4+deb10u2 [118 kB] Get:21 http://deb.debian.org/debian buster/main amd64 file amd64 1:5.35-4+deb10u2 [66.4 kB] Get:22 http://deb.debian.org/debian buster/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:23 http://deb.debian.org/debian buster/main amd64 xz-utils amd64 5.2.4-1+deb10u1 [183 kB] Get:24 http://deb.debian.org/debian buster/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:25 http://deb.debian.org/debian buster/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get:26 http://deb.debian.org/debian buster/main amd64 fonts-freefont-ttf all 20120503-9 [4319 kB] Get:27 http://deb.debian.org/debian buster/main amd64 libquadmath0 amd64 8.3.0-6 [133 kB] Get:28 http://deb.debian.org/debian buster/main amd64 libgfortran5 amd64 8.3.0-6 [581 kB] Get:29 http://deb.debian.org/debian buster/main amd64 libblas3 amd64 3.8.0-2 [148 kB] Get:30 http://deb.debian.org/debian buster/main amd64 libboost-python1.67.0 amd64 1.67.0-13+deb10u1 [328 kB] Get:31 http://deb.debian.org/debian buster/main amd64 libboost-serialization1.67.0 amd64 1.67.0-13+deb10u1 [319 kB] Get:32 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get:33 http://deb.debian.org/debian buster/main amd64 libpng16-16 amd64 1.6.36-6 [292 kB] Get:34 http://deb.debian.org/debian buster/main amd64 libfreetype6 amd64 2.9.1-3+deb10u3 [380 kB] Get:35 http://deb.debian.org/debian buster/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB] Get:36 http://deb.debian.org/debian buster/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get:37 http://deb.debian.org/debian buster/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:38 http://deb.debian.org/debian buster/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:39 http://deb.debian.org/debian buster/main amd64 libxcb1 amd64 1.13.1-2 [137 kB] Get:40 http://deb.debian.org/debian buster/main amd64 libx11-data all 2:1.6.7-1+deb10u2 [299 kB] Get:41 http://deb.debian.org/debian buster/main amd64 libx11-6 amd64 2:1.6.7-1+deb10u2 [757 kB] Get:42 http://deb.debian.org/debian buster/main amd64 libxcb-render0 amd64 1.13.1-2 [109 kB] Get:43 http://deb.debian.org/debian buster/main amd64 libxcb-shm0 amd64 1.13.1-2 [99.2 kB] Get:44 http://deb.debian.org/debian buster/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:45 http://deb.debian.org/debian buster/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:46 http://deb.debian.org/debian buster/main amd64 libcairo2 amd64 1.16.0-4+deb10u1 [688 kB] Get:47 http://deb.debian.org/debian buster/main amd64 libgomp1 amd64 8.3.0-6 [75.8 kB] Get:48 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u3 [8293 kB] Get:49 http://deb.debian.org/debian buster/main amd64 liblapack3 amd64 3.8.0-2 [2110 kB] Get:50 http://deb.debian.org/debian buster/main amd64 libxml2 amd64 2.9.4+dfsg1-7+deb10u4 [689 kB] Get:51 http://deb.debian.org/debian buster/main amd64 libopenbabel5 amd64 2.4.1+dfsg-3 [3003 kB] Get:52 http://deb.debian.org/debian buster/main amd64 libpython2.7 amd64 2.7.16-2+deb10u1 [1036 kB] Get:53 http://deb.debian.org/debian buster/main amd64 libschroedinger-maeparser1 amd64 1.0.1-4 [45.1 kB] Get:54 http://deb.debian.org/debian buster/main amd64 libschroedinger-coordgenlibs1 amd64 1.1-3 [177 kB] Get:55 http://deb.debian.org/debian buster/main amd64 librdkit1 amd64 201809.1+dfsg-6 [2773 kB] Get:56 http://deb.debian.org/debian buster/main amd64 python-chemfp amd64 1.1p1-2.1 [163 kB] Get:57 http://deb.debian.org/debian buster/main amd64 python-pkg-resources all 40.8.0-1 [182 kB] Get:58 http://deb.debian.org/debian buster/main amd64 python-numpy amd64 1:1.16.2-1 [2101 kB] Get:59 http://deb.debian.org/debian buster/main amd64 python-openbabel amd64 2.4.1+dfsg-3 [662 kB] Get:60 http://deb.debian.org/debian buster/main amd64 rdkit-data all 201809.1+dfsg-6 [6771 kB] Get:61 http://deb.debian.org/debian buster/main amd64 python-rdkit amd64 201809.1+dfsg-6 [2940 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 49.5 MB in 1s (44.8 MB/s) Selecting previously unselected package libpython2.7-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6464 files and directories currently installed.) Preparing to unpack .../00-libpython2.7-minimal_2.7.16-2+deb10u1_amd64.deb ... Unpacking libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../01-python2.7-minimal_2.7.16-2+deb10u1_amd64.deb ... Unpacking python2.7-minimal (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-minimal. 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Unpacking libpython-stdlib:amd64 (2.7.16-1) ... Setting up libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... Setting up python2.7-minimal (2.7.16-2+deb10u1) ... Setting up python2-minimal (2.7.16-1) ... Selecting previously unselected package python2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7301 files and directories currently installed.) Preparing to unpack .../python2_2.7.16-1_amd64.deb ... Unpacking python2 (2.7.16-1) ... Setting up python-minimal (2.7.16-1) ... 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Setting up libmagic1:amd64 (1:5.35-4+deb10u2) ... Setting up fonts-freefont-ttf (20120503-9) ... Setting up file (1:5.35-4+deb10u2) ... Setting up libgomp1:amd64 (8.3.0-6) ... Setting up rdkit-data (201809.1+dfsg-6) ... Setting up bzip2 (1.0.6-9.2~deb10u1) ... Setting up libicu63:amd64 (63.1-6+deb10u3) ... Setting up libschroedinger-maeparser1:amd64 (1.0.1-4) ... Setting up libx11-data (2:1.6.7-1+deb10u2) ... Setting up xz-utils (5.2.4-1+deb10u1) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode Setting up libquadmath0:amd64 (8.3.0-6) ... Setting up libpng16-16:amd64 (1.6.36-6) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libgfortran5:amd64 (8.3.0-6) ... Setting up sensible-utils (0.0.12) ... Setting up libboost-python1.67.0 (1.67.0-13+deb10u1) ... Setting up libboost-serialization1.67.0:amd64 (1.67.0-13+deb10u1) ... Setting up libbsd0:amd64 (0.9.1-2+deb10u1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+deb10u4) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up libschroedinger-coordgenlibs1:amd64 (1.1-3) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up libpython2.7-stdlib:amd64 (2.7.16-2+deb10u1) ... Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libfreetype6:amd64 (2.9.1-3+deb10u3) ... Setting up ucf (3.0038+nmu1) ... Setting up libx11-6:amd64 (2:1.6.7-1+deb10u2) ... Setting up libpython2.7:amd64 (2.7.16-2+deb10u1) ... Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libpython2-stdlib:amd64 (2.7.16-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up librdkit1 (201809.1+dfsg-6) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up python2 (2.7.16-1) ... Setting up libpython-stdlib:amd64 (2.7.16-1) ... Setting up libfontconfig1:amd64 (2.13.1-2) ... Setting up python (2.7.16-1) ... Setting up python-pkg-resources (40.8.0-1) ... Setting up libcairo2:amd64 (1.16.0-4+deb10u1) ... Setting up python-chemfp (1.1p1-2.1) ... Setting up python-numpy (1:1.16.2-1) ... Setting up libopenbabel5 (2.4.1+dfsg-3) ... Setting up python-openbabel (2.4.1+dfsg-3) ... Setting up python-rdkit (201809.1+dfsg-6) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... 0m22.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', '-y', 'install', 'python-chemfp=1.1p1-2.1'] 0m22.9s INFO: Running scripts post_install 0m22.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_install_exceptions'] 0m22.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_install_exceptions'] 0m22.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m23.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m25.3s DEBUG: No broken symlinks as far as we can find. 0m25.4s INFO: /bin converted to /usr/bin by /usr merge 0m25.4s INFO: /lib converted to /usr/lib by /usr merge 0m25.4s INFO: /lib/init converted to /usr/lib/init by /usr merge 0m25.4s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 0m25.4s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 0m25.4s INFO: /lib/terminfo converted to /usr/lib/terminfo by /usr merge 0m25.4s INFO: /lib/terminfo/E converted to /usr/lib/terminfo/E by /usr merge 0m25.4s INFO: /lib/terminfo/a converted to /usr/lib/terminfo/a by /usr merge 0m25.4s INFO: /lib/terminfo/c converted to /usr/lib/terminfo/c by /usr merge 0m25.4s INFO: /lib/terminfo/d converted to /usr/lib/terminfo/d by /usr merge 0m25.4s INFO: /lib/terminfo/h converted to /usr/lib/terminfo/h by /usr merge 0m25.4s INFO: /lib/terminfo/l converted to /usr/lib/terminfo/l by /usr merge 0m25.4s INFO: /lib/terminfo/m converted to /usr/lib/terminfo/m by /usr merge 0m25.4s INFO: /lib/terminfo/p converted to /usr/lib/terminfo/p by /usr merge 0m25.4s INFO: /lib/terminfo/r converted to /usr/lib/terminfo/r by /usr merge 0m25.4s INFO: /lib/terminfo/s converted to /usr/lib/terminfo/s by /usr merge 0m25.4s INFO: /lib/terminfo/v converted to /usr/lib/terminfo/v by /usr merge 0m25.4s INFO: /lib/terminfo/w converted to /usr/lib/terminfo/w by /usr merge 0m25.4s INFO: /lib/terminfo/x converted to /usr/lib/terminfo/x by /usr merge 0m25.4s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 0m25.4s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 0m25.4s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 0m25.4s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 0m25.4s INFO: /lib64 converted to /usr/lib64 by /usr merge 0m25.4s INFO: /sbin converted to /usr/sbin by /usr merge 0m26.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', '-ac', '--ignore-obsolete'] 0m27.7s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', '-ac', '--ignore-obsolete'] 0m27.7s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m27.8s DUMP: 0.15.6 0m27.8s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m27.8s INFO: Running adequate version 0.15.6 now. 0m27.8s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'python-chemfp'] 0m27.9s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'python-chemfp'] 0m27.9s INFO: Running scripts pre_remove 0m27.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m31.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m31.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_exceptions'] 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/pre_remove_exceptions'] 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m31.8s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 1.8.2.3 install ok installed base-files base-files 10.3+deb10u13 install ok installed base-passwd base-passwd 3.5.46 install ok installed bash bash 5.0-4 install ok installed bsdutils bsdutils 1:2.33.1-0.1 install ok installed bzip2 bzip2 1.0.6-9.2~deb10u1 install ok installed coreutils coreutils 8.30-3 install ok installed dash dash 0.5.10.2-5 install ok installed debconf debconf 1.5.71+deb10u1 install ok installed debian-archive-keyring debian-archive-keyring 2019.1+deb10u1 install ok installed debianutils debianutils 4.8.6.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.8 install ok installed e2fsprogs e2fsprogs 1.44.5-1+deb10u3 install ok installed fdisk fdisk 2.33.1-0.1 install ok installed file file 1:5.35-4+deb10u2 install ok installed findutils findutils 4.6.0+git+20190209-2 install ok installed fontconfig-config fontconfig-config 2.13.1-2 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-1 install ok installed fonts-freefont-ttf fonts-freefont-ttf 20120503-9 install ok installed gcc-8-base:amd64 gcc-8-base 8.3.0-6 install ok installed gpgv gpgv 2.2.12-1+deb10u2 install ok installed grep grep 3.3-1 install ok installed gzip gzip 1.9-3+deb10u1 install ok installed hostname hostname 3.21 install ok installed init-system-helpers init-system-helpers 1.56+nmu1 install ok installed libacl1:amd64 libacl1 2.2.53-4 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.3 install ok installed libattr1:amd64 libattr1 1:2.4.48-4 install ok installed libaudit-common libaudit-common 1:2.8.4-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.4-3 install ok installed libblas3:amd64 libblas3 3.8.0-2 install ok installed libblkid1:amd64 libblkid1 2.33.1-0.1 install ok installed libboost-python1.67.0 libboost-python1.67.0 1.67.0-13+deb10u1 install ok installed libboost-serialization1.67.0:amd64 libboost-serialization1.67.0 1.67.0-13+deb10u1 install ok installed libbsd0:amd64 libbsd0 0.9.1-2+deb10u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u1 install ok installed libc-bin libc-bin 2.28-10+deb10u1 install ok installed libc6:amd64 libc6 2.28-10+deb10u1 install ok installed libcairo2:amd64 libcairo2 1.16.0-4+deb10u1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libexpat1:amd64 libexpat1 2.2.6-2+deb10u4 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libfontconfig1:amd64 libfontconfig1 2.13.1-2 install ok installed libfreetype6:amd64 libfreetype6 2.9.1-3+deb10u3 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5+deb10u1 install ok installed libgfortran5:amd64 libgfortran5 8.3.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4+deb10u1 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u8 install ok installed libgomp1:amd64 libgomp1 8.3.0-6 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1+deb10u1 install ok installed libicu63:amd64 libicu63 63.1-6+deb10u3 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed liblapack3:amd64 liblapack3 3.8.0-2 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1+deb10u1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+deb10u1 install ok installed libmagic-mgc libmagic-mgc 1:5.35-4+deb10u2 install ok installed libmagic1:amd64 libmagic1 1:5.35-4+deb10u2 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u2 install ok installed libnettle6:amd64 libnettle6 3.4.1-1+deb10u1 install ok installed libopenbabel5 libopenbabel5 2.4.1+dfsg-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2+deb10u1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.36.0-1 install ok installed libpng16-16:amd64 libpng16-16 1.6.36-6 install ok installed libpython-stdlib:amd64 libpython-stdlib 2.7.16-1 install ok installed libpython2-stdlib:amd64 libpython2-stdlib 2.7.16-1 install ok installed libpython2.7:amd64 libpython2.7 2.7.16-2+deb10u1 install ok installed libpython2.7-minimal:amd64 libpython2.7-minimal 2.7.16-2+deb10u1 install ok installed libpython2.7-stdlib:amd64 libpython2.7-stdlib 2.7.16-2+deb10u1 install ok installed libquadmath0:amd64 libquadmath0 8.3.0-6 install ok installed librdkit1 librdkit1 201809.1+dfsg-6 install ok installed libreadline7:amd64 libreadline7 7.0-5 install ok installed libschroedinger-coordgenlibs1:amd64 libschroedinger-coordgenlibs1 1.1-3 install ok installed libschroedinger-maeparser1:amd64 libschroedinger-maeparser1 1.0.1-4 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.27.2-3+deb10u1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libssl1.1:amd64 libssl1.1 1.1.1n-0+deb10u3 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u8 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u2 install ok installed libudev1:amd64 libudev1 241-7~deb10u8 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libx11-6:amd64 libx11-6 2:1.6.7-1+deb10u2 install ok installed libx11-data libx11-data 2:1.6.7-1+deb10u2 install ok installed libxau6:amd64 libxau6 1:1.0.8-1+b2 install ok installed libxcb-render0:amd64 libxcb-render0 1.13.1-2 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.13.1-2 install ok installed libxcb1:amd64 libxcb1 1.13.1-2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.3-1+b2 install ok installed libxml2:amd64 libxml2 2.9.4+dfsg1-7+deb10u4 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3+deb10u2 install ok installed login login 1:4.5-1.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mime-support mime-support 3.62 install ok installed mount mount 2.33.1-0.1 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u2 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u2 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed python python 2.7.16-1 install ok installed python-chemfp python-chemfp 1.1p1-2.1 install ok installed python-minimal python-minimal 2.7.16-1 install ok installed python-numpy python-numpy 1:1.16.2-1 install ok installed python-openbabel python-openbabel 2.4.1+dfsg-3 install ok installed python-pkg-resources python-pkg-resources 40.8.0-1 install ok installed python-rdkit python-rdkit 201809.1+dfsg-6 install ok installed python2 python2 2.7.16-1 install ok installed python2-minimal python2-minimal 2.7.16-1 install ok installed python2.7 python2.7 2.7.16-2+deb10u1 install ok installed python2.7-minimal python2.7-minimal 2.7.16-2+deb10u1 install ok installed rdkit-data rdkit-data 201809.1+dfsg-6 install ok installed readline-common readline-common 7.0-5 install ok installed sed sed 4.7-1 install ok installed sensible-utils sensible-utils 0.0.12 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed tzdata tzdata 2021a-0+deb10u6 install ok installed ucf ucf 3.0038+nmu1 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed xz-utils xz-utils 5.2.4-1+deb10u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1+deb10u1 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', 'remove', 'bzip2', 'file', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-freefont-ttf', 'libblas3:amd64', 'libboost-python1.67.0', 'libboost-serialization1.67.0:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libicu63:amd64', 'liblapack3:amd64', 'libmagic-mgc', 'libmagic1:amd64', 'libopenbabel5', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'librdkit1', 'libreadline7:amd64', 'libschroedinger-coordgenlibs1:amd64', 'libschroedinger-maeparser1:amd64', 'libsqlite3-0:amd64', 'libssl1.1:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'mime-support', 'python', 'python-minimal', 'python-numpy', 'python-openbabel', 'python-pkg-resources', 'python-rdkit', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'rdkit-data', 'readline-common', 'sensible-utils', 'ucf', 'xz-utils', 'python-chemfp'] 0m33.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: bzip2 file fontconfig-config fonts-dejavu-core fonts-freefont-ttf libblas3 libboost-python1.67.0 libboost-serialization1.67.0 libbsd0 libcairo2 libexpat1 libfontconfig1 libfreetype6 libgfortran5 libgomp1 libicu63 liblapack3 libmagic-mgc libmagic1 libopenbabel5 libpixman-1-0 libpng16-16 libpython-stdlib libpython2-stdlib libpython2.7 libpython2.7-minimal libpython2.7-stdlib libquadmath0 librdkit1 libreadline7 libschroedinger-coordgenlibs1 libschroedinger-maeparser1 libsqlite3-0 libssl1.1 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxrender1 mime-support python python-chemfp python-minimal python-numpy python-openbabel python-pkg-resources python-rdkit python2 python2-minimal python2.7 python2.7-minimal rdkit-data readline-common sensible-utils ucf xz-utils 0 upgraded, 0 newly installed, 61 to remove and 0 not upgraded. After this operation, 181 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9604 files and directories currently installed.) Removing bzip2 (1.0.6-9.2~deb10u1) ... Removing file (1:5.35-4+deb10u2) ... Removing python-openbabel (2.4.1+dfsg-3) ... Removing libopenbabel5 (2.4.1+dfsg-3) ... Removing libcairo2:amd64 (1.16.0-4+deb10u1) ... Removing libfontconfig1:amd64 (2.13.1-2) ... Removing fontconfig-config (2.13.1-2) ... Removing fonts-dejavu-core (2.37-1) ... Removing python-rdkit (201809.1+dfsg-6) ... Removing fonts-freefont-ttf (20120503-9) ... Removing python-numpy (1:1.16.2-1) ... Removing liblapack3:amd64 (3.8.0-2) ... Removing libblas3:amd64 (3.8.0-2) ... Removing librdkit1 (201809.1+dfsg-6) ... Removing libboost-python1.67.0 (1.67.0-13+deb10u1) ... Removing libboost-serialization1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libxrender1:amd64 (1:0.9.10-1) ... Removing libxext6:amd64 (2:1.3.3-1+b2) ... Removing libx11-6:amd64 (2:1.6.7-1+deb10u2) ... Removing libxcb-shm0:amd64 (1.13.1-2) ... Removing python-chemfp (1.1p1-2.1) ... Removing python-pkg-resources (40.8.0-1) ... Removing python (2.7.16-1) ... Removing python2 (2.7.16-1) ... Removing python2.7 (2.7.16-2+deb10u1) ... Removing libpython2.7:amd64 (2.7.16-2+deb10u1) ... Removing libfreetype6:amd64 (2.9.1-3+deb10u3) ... Removing libgfortran5:amd64 (8.3.0-6) ... Removing libgomp1:amd64 (8.3.0-6) ... Removing libxml2:amd64 (2.9.4+dfsg1-7+deb10u4) ... Removing libicu63:amd64 (63.1-6+deb10u3) ... Removing libmagic1:amd64 (1:5.35-4+deb10u2) ... Removing libmagic-mgc (1:5.35-4+deb10u2) ... Removing libpixman-1-0:amd64 (0.36.0-1) ... Removing libpng16-16:amd64 (1.6.36-6) ... Removing libpython-stdlib:amd64 (2.7.16-1) ... Removing libpython2-stdlib:amd64 (2.7.16-1) ... Removing python-minimal (2.7.16-1) ... Removing python2-minimal (2.7.16-1) ... Removing python2.7-minimal (2.7.16-2+deb10u1) ... Removing libquadmath0:amd64 (8.3.0-6) ... Removing libschroedinger-coordgenlibs1:amd64 (1.1-3) ... Removing libschroedinger-maeparser1:amd64 (1.0.1-4) ... Removing libx11-data (2:1.6.7-1+deb10u2) ... Removing libxcb-render0:amd64 (1.13.1-2) ... Removing rdkit-data (201809.1+dfsg-6) ... Removing ucf (3.0038+nmu1) ... Removing sensible-utils (0.0.12) ... Removing xz-utils (5.2.4-1+deb10u1) ... Removing libxcb1:amd64 (1.13.1-2) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.9.1-2+deb10u1) ... Removing libpython2.7-stdlib:amd64 (2.7.16-2+deb10u1) ... Removing libexpat1:amd64 (2.2.6-2+deb10u4) ... Removing libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... find: '/usr/lib/python2.7': No such file or directory Removing libreadline7:amd64 (7.0-5) ... Removing libsqlite3-0:amd64 (3.27.2-3+deb10u1) ... Removing libssl1.1:amd64 (1.1.1n-0+deb10u3) ... Removing libxau6:amd64 (1:1.0.8-1+b2) ... Removing mime-support (3.62) ... Removing readline-common (7.0-5) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', 'remove', 'bzip2', 'file', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-freefont-ttf', 'libblas3:amd64', 'libboost-python1.67.0', 'libboost-serialization1.67.0:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libicu63:amd64', 'liblapack3:amd64', 'libmagic-mgc', 'libmagic1:amd64', 'libopenbabel5', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'librdkit1', 'libreadline7:amd64', 'libschroedinger-coordgenlibs1:amd64', 'libschroedinger-maeparser1:amd64', 'libsqlite3-0:amd64', 'libssl1.1:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'mime-support', 'python', 'python-minimal', 'python-numpy', 'python-openbabel', 'python-pkg-resources', 'python-rdkit', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'rdkit-data', 'readline-common', 'sensible-utils', 'ucf', 'xz-utils', 'python-chemfp'] 0m33.9s INFO: Running scripts post_remove 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_remove_exceptions'] 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_remove_exceptions'] 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg', '--purge', 'bzip2', 'file', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-freefont-ttf', 'libblas3:amd64', 'libboost-python1.67.0', 'libboost-serialization1.67.0:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libicu63:amd64', 'liblapack3:amd64', 'libmagic-mgc', 'libmagic1:amd64', 'libopenbabel5', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'librdkit1', 'libreadline7:amd64', 'libschroedinger-coordgenlibs1:amd64', 'libschroedinger-maeparser1:amd64', 'libsqlite3-0:amd64', 'libssl1.1:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'mime-support', 'python', 'python-minimal', 'python-numpy', 'python-openbabel', 'python-pkg-resources', 'python-rdkit', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'rdkit-data', 'readline-common', 'sensible-utils', 'ucf', 'xz-utils'] 0m34.6s DUMP: dpkg: warning: ignoring request to remove bzip2 which isn't installed dpkg: warning: ignoring request to remove file which isn't installed (Reading database ... 6489 files and directories currently installed.) Purging configuration files for fontconfig-config (2.13.1-2) ... Purging configuration files for fonts-dejavu-core (2.37-1) ... dpkg: warning: ignoring request to remove fonts-freefont-ttf which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libboost-python1.67.0 which isn't installed dpkg: warning: ignoring request to remove libboost-serialization1.67.0 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libicu63 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libmagic-mgc which isn't installed Purging configuration files for libmagic1:amd64 (1:5.35-4+deb10u2) ... dpkg: warning: ignoring request to remove libopenbabel5 which isn't installed dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpython-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython2-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython2.7 which isn't installed Purging configuration files for libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... dpkg: warning: ignoring request to remove libpython2.7-stdlib which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove librdkit1 which isn't installed dpkg: warning: ignoring request to remove libreadline7 which isn't installed dpkg: warning: ignoring request to remove libschroedinger-coordgenlibs1 which isn't installed dpkg: warning: ignoring request to remove libschroedinger-maeparser1 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed Purging configuration files for libssl1.1:amd64 (1.1.1n-0+deb10u3) ... dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed Purging configuration files for mime-support (3.62) ... Purging configuration files for python (2.7.16-1) ... dpkg: warning: ignoring request to remove python-minimal which isn't installed dpkg: warning: ignoring request to remove python-numpy which isn't installed dpkg: warning: ignoring request to remove python-openbabel which isn't installed dpkg: warning: ignoring request to remove python-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python-rdkit which isn't installed dpkg: warning: ignoring request to remove python2 which isn't installed dpkg: warning: ignoring request to remove python2-minimal which isn't installed dpkg: warning: ignoring request to remove python2.7 which isn't installed Purging configuration files for python2.7-minimal (2.7.16-2+deb10u1) ... dpkg: warning: ignoring request to remove rdkit-data which isn't installed Purging configuration files for readline-common (7.0-5) ... dpkg: warning: ignoring request to remove sensible-utils which isn't installed Purging configuration files for ucf (3.0038+nmu1) ... dpkg: warning: ignoring request to remove xz-utils which isn't installed 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg', '--purge', 'bzip2', 'file', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-freefont-ttf', 'libblas3:amd64', 'libboost-python1.67.0', 'libboost-serialization1.67.0:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libicu63:amd64', 'liblapack3:amd64', 'libmagic-mgc', 'libmagic1:amd64', 'libopenbabel5', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'librdkit1', 'libreadline7:amd64', 'libschroedinger-coordgenlibs1:amd64', 'libschroedinger-maeparser1:amd64', 'libsqlite3-0:amd64', 'libssl1.1:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'mime-support', 'python', 'python-minimal', 'python-numpy', 'python-openbabel', 'python-pkg-resources', 'python-rdkit', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'rdkit-data', 'readline-common', 'sensible-utils', 'ucf', 'xz-utils'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg', '--purge', 'python-chemfp'] 0m34.6s DUMP: dpkg: warning: ignoring request to remove python-chemfp which isn't installed 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg', '--purge', 'python-chemfp'] 0m34.6s INFO: Running scripts post_purge 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_purge_exceptions'] 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_purge_exceptions'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg', '--purge', '--pending'] 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg', '--purge', '--pending'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg', '--remove', '--pending'] 0m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg', '--remove', '--pending'] 0m34.7s INFO: Running scripts post_test 0m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_test_exceptions'] 0m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'tmp/scripts/post_test_exceptions'] 0m34.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m35.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m36.1s DEBUG: No broken symlinks as far as we can find. 0m36.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg-divert', '--list'] 0m36.1s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m36.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'dpkg-divert', '--list'] 0m36.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', 'clean'] 0m36.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr', 'apt-get', 'clean'] 0m36.2s DEBUG: Recording chroot state 0m36.9s INFO: PASS: Installation and purging test. 0m37.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/shm'] 0m37.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/shm'] 0m37.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/console'] 0m37.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/console'] 0m37.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/ptmx'] 0m37.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/ptmx'] 0m37.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/pts'] 0m37.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/dev/pts'] 0m37.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/proc'] 0m37.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr/proc'] 0m37.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m37.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpwyk2ahnr'] 0m37.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpwyk2ahnr 0m37.6s INFO: PASS: All tests. 0m37.6s INFO: piuparts run ends. ret=0 End: 2024-10-29 06:16:39 GMT