Start: 2024-04-15 15:40:42 GMT Package: stacks-web Source: stacks Version: 2.2+dfsg-1 Installed-Size: 381 Maintainer: Debian Med Packaging Team Architecture: all Depends: apache2 | httpd, default-mysql-server | virtual-mysql-server, libapache2-mod-php | php-cgi, libdbd-mysql-perl, php-mdb2-driver-mysql Recommends: stacks Description: web interface for displaying loci from short-read sequences Homepage: http://creskolab.uoregon.edu/stacks/ Description-md5: 78bcee97c498385c1837dfc631d85843 Section: science Priority: optional Filename: pool/main/s/stacks/stacks-web_2.2+dfsg-1_all.deb Size: 89100 MD5sum: 84a55c11d8cd6f5e08170d8bc72b27fe SHA256: e2e2b7069f558e55deaf4a4b1e47094e8116a436a3f7f9509689be8af202f494 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz -d buster --no-upgrade-test --apt stacks-web=2.2+dfsg-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.1~202403190841~1.4-4-g85045c69 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz -d buster --no-upgrade-test --apt stacks-web=2.2+dfsg-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-28-amd64 #1 SMP Debian 5.10.209-2 (2024-01-31) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp1ju9econ 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp1ju9econ 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/pts'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/pts'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/ptmx'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/ptmx'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/console'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/console'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/shm'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/shm'] 0m0.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ buster main 0m0.3s DEBUG: Created policy-rc.d and chmodded it. 0m0.3s DEBUG: Created resolv.conf. 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp1ju9econ/tmp/scripts/ 0m0.3s INFO: Running scripts post_chroot_unpack 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', 'update'] 0m1.6s DUMP: Hit:1 http://deb.debian.org/debian buster InRelease Reading package lists... 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', 'update'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', '-yf', 'dist-upgrade'] 0m2.2s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', '-yf', 'dist-upgrade'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.5s DUMP: f6fc0f2636004ef589309651dfd778f4 - 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.5s INFO: Running scripts post_setup 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_dummy_users'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_dummy_users'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_forbid_home'] 0m3.8s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_forbid_home'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.9s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_minimize'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_minimize'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_zz_backports'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_setup_zz_backports'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', 'clean'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', 'clean'] 0m3.9s DEBUG: Recording chroot state 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.4s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 1.8.2.3 install ok installed base-files base-files 10.3+deb10u13 install ok installed base-passwd base-passwd 3.5.46 install ok installed bash bash 5.0-4 install ok installed bsdutils bsdutils 1:2.33.1-0.1 install ok installed coreutils coreutils 8.30-3 install ok installed dash dash 0.5.10.2-5 install ok installed debconf debconf 1.5.71+deb10u1 install ok installed debian-archive-keyring debian-archive-keyring 2019.1+deb10u1 install ok installed debianutils debianutils 4.8.6.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.8 install ok installed e2fsprogs e2fsprogs 1.44.5-1+deb10u3 install ok installed fdisk fdisk 2.33.1-0.1 install ok installed findutils findutils 4.6.0+git+20190209-2 install ok installed gcc-8-base:amd64 gcc-8-base 8.3.0-6 install ok installed gpgv gpgv 2.2.12-1+deb10u2 install ok installed grep grep 3.3-1 install ok installed gzip gzip 1.9-3+deb10u1 install ok installed hostname hostname 3.21 install ok installed init-system-helpers init-system-helpers 1.56+nmu1 install ok installed libacl1:amd64 libacl1 2.2.53-4 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.3 install ok installed libattr1:amd64 libattr1 1:2.4.48-4 install ok installed libaudit-common libaudit-common 1:2.8.4-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.4-3 install ok installed libblkid1:amd64 libblkid1 2.33.1-0.1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u1 install ok installed libc-bin libc-bin 2.28-10+deb10u1 install ok installed libc6:amd64 libc6 2.28-10+deb10u1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5+deb10u1 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4+deb10u1 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u8 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1+deb10u1 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1+deb10u1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+deb10u1 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u2 install ok installed libnettle6:amd64 libnettle6 3.4.1-1+deb10u1 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2+deb10u1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u8 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u2 install ok installed libudev1:amd64 libudev1 241-7~deb10u8 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3+deb10u2 install ok installed login login 1:4.5-1.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.33.1-0.1 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u2 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u2 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed tzdata tzdata 2021a-0+deb10u6 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1+deb10u1 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg-divert', '--list'] 0m4.4s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg-divert', '--list'] 0m4.4s INFO: Running scripts is_testable 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/is_testable_uninstallable'] 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/is_testable_uninstallable'] 0m4.4s INFO: apt-cache does not know about any of the requested packages 0m4.4s INFO: Running scripts pre_test 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_test_exceptions'] 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_test_exceptions'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_test_root_password'] 0m4.5s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_test_root_password'] 0m4.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 0m4.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 0m5.3s DEBUG: No broken symlinks as far as we can find. 0m5.3s INFO: Running scripts pre_install 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_database-server'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_database-server'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_exceptions'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_exceptions'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_extras'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_extras'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 0m5.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 0m6.2s DEBUG: No broken symlinks as far as we can find. 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-cache', 'policy'] 0m7.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian buster/main amd64 Packages release v=10.13,o=Debian,a=oldoldstable,n=buster,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-cache', 'policy'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-cache', 'policy', 'stacks-web'] 0m7.1s DUMP: stacks-web: Installed: (none) Candidate: 2.2+dfsg-1 Version table: 2.2+dfsg-1 500 500 http://deb.debian.org/debian buster/main amd64 Packages 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-cache', 'policy', 'stacks-web'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', '-y', 'install', 'stacks-web=2.2+dfsg-1'] 1m37.9s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: apache2 apache2-bin apache2-data apache2-utils binutils binutils-common binutils-x86-64-linux-gnu bzip2 ca-certificates cpp cpp-8 cwltool default-mysql-server file fontconfig-config fonts-dejavu-core fonts-glyphicons-halflings g++ g++-8 galera-3 gawk gcc gcc-8 gdal-data iproute2 krb5-locales libaec0 libaio1 libapache2-mod-php libapache2-mod-php7.3 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libargon2-1 libarmadillo9 libarpack2 libasan5 libatm1 libatomic1 libbinutils libbit-vector-perl libblas3 libbrotli1 libbsd0 libc-ares2 libc-dev-bin libc6-dev libcap2 libcap2-bin libcarp-clan-perl libcc1-0 libcgi-fast-perl libcgi-pm-perl libcharls2 libconfig-inifiles-perl libcurl3-gnutls libcurl4 libdap25 libdapclient6v5 libdapserver7v5 libdate-calc-perl libdate-calc-xs-perl libdate-manip-perl libdbd-mysql-perl libdbi-perl libdeflate0 libedit2 libelf1 libencode-locale-perl libepsilon1 libexpat1 libfcgi-perl libfontconfig1 libfreetype6 libfreexl1 libfyba0 libgcc-8-dev libgdal20 libgdbm-compat4 libgdbm6 libgeos-3.7.1 libgeos-c1v5 libgeotiff2 libgfortran5 libgif7 libgomp1 libgpm2 libgssapi-krb5-2 libhdf4-0-alt libhdf5-103 libhtml-parser-perl libhtml-tagset-perl libhtml-template-perl libhts2 libhttp-date-perl libhttp-message-perl libicu63 libimagequant0 libio-html-perl libio-stringy-perl libisl19 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-bootstrap libjson-c3 libk5crypto3 libkeyutils1 libkmlbase1 libkmlconvenience1 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common liblsan0 libltdl7 liblua5.2-0 liblwp-mediatypes-perl libmagic-mgc libmagic1 libmariadb3 libminizip1 libmnl0 libmpc3 libmpdec2 libmpfr6 libmpx2 libncurses6 libnetcdf13 libnghttp2-14 libnode64 libnspr4 libnss3 libodbc1 libogdi3.2 libole-storage-lite-perl libopenjp2-7 libpam-cap libparse-recdescent-perl libpcre2-8-0 libperl5.28 libpng16-16 libpoppler82 libpopt0 libpq5 libprocps7 libproj13 libpsl5 libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libqhull7 libquadmath0 libreadline5 libreadline7 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libsigsegv2 libsnappy1v5 libsodium23 libspatialite7 libspreadsheet-writeexcel-perl libsqlite3-0 libssh2-1 libssl1.1 libstdc++-8-dev libsuperlu5 libsz2 libterm-readkey-perl libtiff5 libtimedate-perl libtsan0 libubsan1 liburi-perl liburiparser1 libuv1 libwebp6 libwebpdemux2 libwebpmux3 libwrap0 libxerces-c3.2 libxml2 libxslt1.1 libxtables12 libyaml-0-2 linux-libc-dev lsb-base lsof manpages manpages-dev mariadb-client-10.3 mariadb-client-core-10.3 mariadb-common mariadb-server-10.3 mariadb-server-core-10.3 mime-support mysql-common netbase nodejs nodejs-doc odbcinst odbcinst1debian2 openssl perl perl-modules-5.28 php-common php-mdb2 php-mdb2-driver-mysql php-mysql php-pear php-xml php7.3-cli php7.3-common php7.3-json php7.3-mysql php7.3-opcache php7.3-readline php7.3-xml poppler-data procps proj-bin proj-data psmisc publicsuffix python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-bs4 python3-cachecontrol python3-certifi python3-chardet python3-dateutil python3-decorator python3-distutils python3-gdal python3-html5lib python3-idna python3-isodate python3-lib2to3 python3-lockfile python3-lxml python3-minimal python3-mistune python3-mypy python3-mypy-extensions python3-networkx python3-numpy python3-olefile python3-pil python3-pkg-resources python3-prov python3-psutil python3-pyparsing python3-rdflib python3-rdflib-jsonld python3-requests python3-ruamel.yaml python3-schema-salad python3-scipy python3-shellescape python3-six python3-soupsieve python3-sparqlwrapper python3-typed-ast python3-typing-extensions python3-urllib3 python3-webencodings python3-yaml python3.7 python3.7-minimal readline-common rsync samtools sensible-utils socat ssl-cert stacks ucf xz-utils Suggested packages: apache2-doc apache2-suexec-pristine | apache2-suexec-custom www-browser binutils-doc bzip2-doc cpp-doc gcc-8-locales docker.io | singularity-container g++-multilib g++-8-multilib gcc-8-doc libstdc++6-8-dbg gawk-doc gcc-multilib make autoconf automake libtool flex bison gdb gcc-doc gcc-8-multilib libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan5-dbg liblsan0-dbg libtsan0-dbg libubsan1-dbg libmpx2-dbg libquadmath0-dbg iproute2-doc glibc-doc libclone-perl libmldbm-perl libnet-daemon-perl libsql-statement-perl gdbm-l10n geotiff-bin gdal-bin libgeotiff-epsg gpm krb5-doc krb5-user libhdf4-doc libhdf4-alt-dev hdf4-tools libdata-dump-perl libipc-sharedcache-perl liblcms2-utils libmyodbc odbc-postgresql tdsodbc unixodbc-bin ogdi-bin libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal libsasl2-modules-ldap libsasl2-modules-otp libsasl2-modules-sql libspreadsheet-parseexcel-perl libstdc++-8-doc libwww-perl man-browser mailx mariadb-test netcat-openbsd tinyca npm perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libb-debug-perl liblocale-codes-perl php-mdb2-driver-fbsql php-mdb2-driver-ibase php-mdb2-driver-mssql php-mdb2-driver-mysqli php-mdb2-driver-oci8 php-mdb2-driver-odbc php-mdb2-driver-pgsql php-mdb2-driver-querysim php-mdb2-driver-sqlite php-mdb2-driver-sqlsrv poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum python-doc python-tk python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3-genshi python-lockfile-doc python3-lxml-dbg python-lxml-doc python-networkx-doc gfortran python-numpy-doc python3-dev python3-pytest python3-numpy-dbg python-pil-doc python3-pil-dbg python3-setuptools python-prov-doc python3-pydot python-psutil-doc python-pyparsing-doc python-rdflib-doc python3-cryptography python3-openssl python3-socks python-scipy-doc python3.7-venv python3.7-doc readline-doc openssh-client openssh-server openssl-blacklist The following NEW packages will be installed: apache2 apache2-bin apache2-data apache2-utils binutils binutils-common binutils-x86-64-linux-gnu bzip2 ca-certificates cpp cpp-8 cwltool default-mysql-server file fontconfig-config fonts-dejavu-core fonts-glyphicons-halflings g++ g++-8 galera-3 gawk gcc gcc-8 gdal-data iproute2 krb5-locales libaec0 libaio1 libapache2-mod-php libapache2-mod-php7.3 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libargon2-1 libarmadillo9 libarpack2 libasan5 libatm1 libatomic1 libbinutils libbit-vector-perl libblas3 libbrotli1 libbsd0 libc-ares2 libc-dev-bin libc6-dev libcap2 libcap2-bin libcarp-clan-perl libcc1-0 libcgi-fast-perl libcgi-pm-perl libcharls2 libconfig-inifiles-perl libcurl3-gnutls libcurl4 libdap25 libdapclient6v5 libdapserver7v5 libdate-calc-perl libdate-calc-xs-perl libdate-manip-perl libdbd-mysql-perl libdbi-perl libdeflate0 libedit2 libelf1 libencode-locale-perl libepsilon1 libexpat1 libfcgi-perl libfontconfig1 libfreetype6 libfreexl1 libfyba0 libgcc-8-dev libgdal20 libgdbm-compat4 libgdbm6 libgeos-3.7.1 libgeos-c1v5 libgeotiff2 libgfortran5 libgif7 libgomp1 libgpm2 libgssapi-krb5-2 libhdf4-0-alt libhdf5-103 libhtml-parser-perl libhtml-tagset-perl libhtml-template-perl libhts2 libhttp-date-perl libhttp-message-perl libicu63 libimagequant0 libio-html-perl libio-stringy-perl libisl19 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-bootstrap libjson-c3 libk5crypto3 libkeyutils1 libkmlbase1 libkmlconvenience1 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common liblsan0 libltdl7 liblua5.2-0 liblwp-mediatypes-perl libmagic-mgc libmagic1 libmariadb3 libminizip1 libmnl0 libmpc3 libmpdec2 libmpfr6 libmpx2 libncurses6 libnetcdf13 libnghttp2-14 libnode64 libnspr4 libnss3 libodbc1 libogdi3.2 libole-storage-lite-perl libopenjp2-7 libpam-cap libparse-recdescent-perl libpcre2-8-0 libperl5.28 libpng16-16 libpoppler82 libpopt0 libpq5 libprocps7 libproj13 libpsl5 libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libqhull7 libquadmath0 libreadline5 libreadline7 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libsigsegv2 libsnappy1v5 libsodium23 libspatialite7 libspreadsheet-writeexcel-perl libsqlite3-0 libssh2-1 libssl1.1 libstdc++-8-dev libsuperlu5 libsz2 libterm-readkey-perl libtiff5 libtimedate-perl libtsan0 libubsan1 liburi-perl liburiparser1 libuv1 libwebp6 libwebpdemux2 libwebpmux3 libwrap0 libxerces-c3.2 libxml2 libxslt1.1 libxtables12 libyaml-0-2 linux-libc-dev lsb-base lsof manpages manpages-dev mariadb-client-10.3 mariadb-client-core-10.3 mariadb-common mariadb-server-10.3 mariadb-server-core-10.3 mime-support mysql-common netbase nodejs nodejs-doc odbcinst odbcinst1debian2 openssl perl perl-modules-5.28 php-common php-mdb2 php-mdb2-driver-mysql php-mysql php-pear php-xml php7.3-cli php7.3-common php7.3-json php7.3-mysql php7.3-opcache php7.3-readline php7.3-xml poppler-data procps proj-bin proj-data psmisc publicsuffix python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-bs4 python3-cachecontrol python3-certifi python3-chardet python3-dateutil python3-decorator python3-distutils python3-gdal python3-html5lib python3-idna python3-isodate python3-lib2to3 python3-lockfile python3-lxml python3-minimal python3-mistune python3-mypy python3-mypy-extensions python3-networkx python3-numpy python3-olefile python3-pil python3-pkg-resources python3-prov python3-psutil python3-pyparsing python3-rdflib python3-rdflib-jsonld python3-requests python3-ruamel.yaml python3-schema-salad python3-scipy python3-shellescape python3-six python3-soupsieve python3-sparqlwrapper python3-typed-ast python3-typing-extensions python3-urllib3 python3-webencodings python3-yaml python3.7 python3.7-minimal readline-common rsync samtools sensible-utils socat ssl-cert stacks stacks-web ucf xz-utils 0 upgraded, 298 newly installed, 0 to remove and 0 not upgraded. Need to get 174 MB of archives. After this operation, 795 MB of additional disk space will be used. 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buster/main amd64 mime-support all 3.62 [37.2 kB] Get:12 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u4 [108 kB] Get:13 http://deb.debian.org/debian buster/main amd64 readline-common all 7.0-5 [70.6 kB] Get:14 http://deb.debian.org/debian buster/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:15 http://deb.debian.org/debian buster/main amd64 libsqlite3-0 amd64 3.27.2-3+deb10u1 [641 kB] Get:16 http://deb.debian.org/debian buster/main amd64 libpython2.7-stdlib amd64 2.7.16-2+deb10u1 [1912 kB] Get:17 http://deb.debian.org/debian buster/main amd64 python2.7 amd64 2.7.16-2+deb10u1 [305 kB] Get:18 http://deb.debian.org/debian buster/main amd64 libpython2-stdlib amd64 2.7.16-1 [20.8 kB] Get:19 http://deb.debian.org/debian buster/main amd64 libpython-stdlib amd64 2.7.16-1 [20.8 kB] Get:20 http://deb.debian.org/debian buster/main amd64 python2 amd64 2.7.16-1 [41.6 kB] Get:21 http://deb.debian.org/debian buster/main amd64 python amd64 2.7.16-1 [22.8 kB] Get:22 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buster/main amd64 liblua5.2-0 amd64 5.2.4-1.1+b2 [110 kB] Get:43 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u3 [8293 kB] Get:44 http://deb.debian.org/debian buster/main amd64 libxml2 amd64 2.9.4+dfsg1-7+deb10u4 [689 kB] Get:45 http://deb.debian.org/debian buster/main amd64 apache2-bin amd64 2.4.38-3+deb10u8 [1309 kB] Get:46 http://deb.debian.org/debian buster/main amd64 apache2-data all 2.4.38-3+deb10u8 [165 kB] Get:47 http://deb.debian.org/debian buster/main amd64 apache2-utils amd64 2.4.38-3+deb10u8 [238 kB] Get:48 http://deb.debian.org/debian buster/main amd64 lsb-base all 10.2019051400 [28.4 kB] Get:49 http://deb.debian.org/debian buster/main amd64 libncurses6 amd64 6.1+20181013-2+deb10u2 [102 kB] Get:50 http://deb.debian.org/debian buster/main amd64 libprocps7 amd64 2:3.3.15-2 [61.7 kB] Get:51 http://deb.debian.org/debian buster/main amd64 procps amd64 2:3.3.15-2 [259 kB] Get:52 http://deb.debian.org/debian buster/main amd64 apache2 amd64 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1:2.25-2 [28.8 kB] Get:64 http://deb.debian.org/debian buster/main amd64 iproute2 amd64 4.20.0-2+deb10u1 [826 kB] Get:65 http://deb.debian.org/debian buster/main amd64 libdbi-perl amd64 1.642-1+deb10u2 [775 kB] Get:66 http://deb.debian.org/debian buster/main amd64 lsof amd64 4.91+dfsg-1 [319 kB] Get:67 http://deb.debian.org/debian buster/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:68 http://deb.debian.org/debian buster/main amd64 libaio1 amd64 0.3.112-3 [11.2 kB] Get:69 http://deb.debian.org/debian buster/main amd64 libreadline5 amd64 5.2+dfsg-3+b13 [120 kB] Get:70 http://deb.debian.org/debian buster/main amd64 libsnappy1v5 amd64 1.1.7-1 [17.0 kB] Get:71 http://deb.debian.org/debian buster/main amd64 mariadb-client-core-10.3 amd64 1:10.3.34-0+deb10u1 [5767 kB] Get:72 http://deb.debian.org/debian buster/main amd64 mariadb-client-10.3 amd64 1:10.3.34-0+deb10u1 [1144 kB] Get:73 http://deb.debian.org/debian buster/main amd64 mariadb-server-core-10.3 amd64 1:10.3.34-0+deb10u1 [5995 kB] Get:74 http://deb.debian.org/debian buster/main amd64 psmisc amd64 23.2-1+deb10u1 [126 kB] Get:75 http://deb.debian.org/debian buster/main amd64 libpopt0 amd64 1.16-12 [49.4 kB] Get:76 http://deb.debian.org/debian buster/main amd64 rsync amd64 3.1.3-6 [397 kB] Get:77 http://deb.debian.org/debian buster/main amd64 libwrap0 amd64 7.6.q-28 [58.7 kB] Get:78 http://deb.debian.org/debian buster/main amd64 socat amd64 1.7.3.2-2 [358 kB] Get:79 http://deb.debian.org/debian buster/main amd64 mariadb-server-10.3 amd64 1:10.3.34-0+deb10u1 [4222 kB] Get:80 http://deb.debian.org/debian buster/main amd64 poppler-data all 0.4.9-2 [1473 kB] Get:81 http://deb.debian.org/debian buster/main amd64 libpython3.7-minimal amd64 3.7.3-2+deb10u3 [589 kB] Get:82 http://deb.debian.org/debian buster/main amd64 python3.7-minimal amd64 3.7.3-2+deb10u3 [1737 kB] Get:83 http://deb.debian.org/debian buster/main amd64 python3-minimal amd64 3.7.3-1 [36.6 kB] Get:84 http://deb.debian.org/debian buster/main amd64 libmpdec2 amd64 2.4.2-2 [87.2 kB] Get:85 http://deb.debian.org/debian buster/main amd64 libpython3.7-stdlib amd64 3.7.3-2+deb10u3 [1734 kB] Get:86 http://deb.debian.org/debian buster/main amd64 python3.7 amd64 3.7.3-2+deb10u3 [330 kB] Get:87 http://deb.debian.org/debian buster/main amd64 libpython3-stdlib amd64 3.7.3-1 [20.0 kB] Get:88 http://deb.debian.org/debian buster/main amd64 python3 amd64 3.7.3-1 [61.5 kB] Get:89 http://deb.debian.org/debian buster/main amd64 netbase all 5.6 [19.4 kB] Get:90 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:91 http://deb.debian.org/debian buster/main amd64 bzip2 amd64 1.0.6-9.2~deb10u1 [48.4 kB] Get:92 http://deb.debian.org/debian buster/main amd64 libmagic-mgc amd64 1:5.35-4+deb10u2 [242 kB] Get:93 http://deb.debian.org/debian buster/main amd64 libmagic1 amd64 1:5.35-4+deb10u2 [118 kB] Get:94 http://deb.debian.org/debian buster/main amd64 file amd64 1:5.35-4+deb10u2 [66.4 kB] Get:95 http://deb.debian.org/debian buster/main amd64 krb5-locales all 1.17-3+deb10u4 [95.6 kB] Get:96 http://deb.debian.org/debian buster/main amd64 manpages all 4.16-2 [1295 kB] Get:97 http://deb.debian.org/debian buster/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:98 http://deb.debian.org/debian buster/main amd64 xz-utils amd64 5.2.4-1+deb10u1 [183 kB] Get:99 http://deb.debian.org/debian buster/main amd64 binutils-common amd64 2.31.1-16 [2073 kB] Get:100 http://deb.debian.org/debian buster/main amd64 libbinutils amd64 2.31.1-16 [478 kB] Get:101 http://deb.debian.org/debian buster/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-16 [1823 kB] Get:102 http://deb.debian.org/debian buster/main amd64 binutils amd64 2.31.1-16 [56.8 kB] Get:103 http://deb.debian.org/debian buster/main amd64 openssl amd64 1.1.1n-0+deb10u3 [855 kB] Get:104 http://deb.debian.org/debian buster/main amd64 ca-certificates all 20200601~deb10u2 [166 kB] Get:105 http://deb.debian.org/debian buster/main amd64 libisl19 amd64 0.20-2 [587 kB] Get:106 http://deb.debian.org/debian buster/main amd64 libmpc3 amd64 1.1.0-1 [41.3 kB] Get:107 http://deb.debian.org/debian buster/main amd64 cpp-8 amd64 8.3.0-6 [8914 kB] Get:108 http://deb.debian.org/debian buster/main amd64 cpp amd64 4:8.3.0-1 [19.4 kB] Get:109 http://deb.debian.org/debian buster/main amd64 python3-typed-ast amd64 1.3.1-1 [138 kB] Get:110 http://deb.debian.org/debian buster/main amd64 python3-mypy-extensions all 0.4.1-1 [5234 B] Get:111 http://deb.debian.org/debian buster/main amd64 python3-psutil amd64 5.5.1-1 [166 kB] Get:112 http://deb.debian.org/debian buster/main amd64 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get:113 http://deb.debian.org/debian buster/main amd64 python3-distutils all 3.7.3-1 [142 kB] Get:114 http://deb.debian.org/debian buster/main amd64 python3-pkg-resources all 40.8.0-1 [153 kB] Get:115 http://deb.debian.org/debian buster/main amd64 python3-mypy all 0.670-2 [781 kB] Get:116 http://deb.debian.org/debian buster/main amd64 python3-six all 1.12.0-1 [15.7 kB] Get:117 http://deb.debian.org/debian buster/main amd64 python3-dateutil all 2.7.3-3 [64.5 kB] Get:118 http://deb.debian.org/debian buster/main amd64 libxslt1.1 amd64 1.1.32-2.2~deb10u1 [237 kB] Get:119 http://deb.debian.org/debian buster/main amd64 python3-lxml amd64 4.3.2-1+deb10u4 [1163 kB] Get:120 http://deb.debian.org/debian buster/main amd64 python3-decorator all 4.3.0-1.1 [14.5 kB] Get:121 http://deb.debian.org/debian buster/main amd64 python3-networkx all 2.2-1 [818 kB] Get:122 http://deb.debian.org/debian buster/main amd64 python3-isodate all 0.6.0-1 [24.9 kB] Get:123 http://deb.debian.org/debian buster/main amd64 python3-pyparsing all 2.2.0+dfsg1-2 [89.6 kB] Get:124 http://deb.debian.org/debian buster/main amd64 python3-rdflib all 4.2.2-2 [258 kB] Get:125 http://deb.debian.org/debian buster/main amd64 python3-prov all 1.5.2-1 [94.4 kB] Get:126 http://deb.debian.org/debian buster/main amd64 python3-certifi all 2018.8.24-1 [140 kB] Get:127 http://deb.debian.org/debian buster/main amd64 python3-chardet all 3.0.4-3 [80.5 kB] Get:128 http://deb.debian.org/debian buster/main amd64 python3-idna all 2.6-1 [34.3 kB] Get:129 http://deb.debian.org/debian buster/main amd64 python3-urllib3 all 1.24.1-1 [97.1 kB] Get:130 http://deb.debian.org/debian buster/main amd64 python3-requests all 2.21.0-1 [66.9 kB] Get:131 http://deb.debian.org/debian buster/main amd64 python3-ruamel.yaml amd64 0.15.34-1+b1 [248 kB] Get:132 http://deb.debian.org/debian buster/main amd64 python3-cachecontrol all 0.11.7-1 [15.2 kB] Get:133 http://deb.debian.org/debian buster/main amd64 python3-lockfile all 1:0.12.2-2 [17.1 kB] Get:134 http://deb.debian.org/debian buster/main amd64 python3-mistune all 0.8.4-1 [16.1 kB] Get:135 http://deb.debian.org/debian buster/main amd64 python3-rdflib-jsonld all 0.4.0-4 [12.3 kB] Get:136 http://deb.debian.org/debian buster/main amd64 python3-typing-extensions all 3.7.2-1 [23.0 kB] Get:137 http://deb.debian.org/debian buster/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-1 [164 kB] Get:138 http://deb.debian.org/debian buster/main amd64 libjs-bootstrap all 3.4.1+dfsg-1 [173 kB] Get:139 http://deb.debian.org/debian buster/main amd64 python3-schema-salad all 3.0.20181206233650-2 [272 kB] Get:140 http://deb.debian.org/debian buster/main amd64 python3-shellescape all 3.4.1-3 [4800 B] Get:141 http://deb.debian.org/debian buster/main amd64 cwltool all 1.0.20181217162649+dfsg-10 [176 kB] Get:142 http://deb.debian.org/debian buster/main amd64 default-mysql-server all 1.0.5 [3540 B] Get:143 http://deb.debian.org/debian buster/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:144 http://deb.debian.org/debian buster/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get:145 http://deb.debian.org/debian buster/main amd64 libcc1-0 amd64 8.3.0-6 [46.6 kB] Get:146 http://deb.debian.org/debian buster/main amd64 libgomp1 amd64 8.3.0-6 [75.8 kB] Get:147 http://deb.debian.org/debian buster/main amd64 libitm1 amd64 8.3.0-6 [27.7 kB] Get:148 http://deb.debian.org/debian buster/main amd64 libatomic1 amd64 8.3.0-6 [9032 B] Get:149 http://deb.debian.org/debian buster/main amd64 libasan5 amd64 8.3.0-6 [362 kB] Get:150 http://deb.debian.org/debian buster/main amd64 liblsan0 amd64 8.3.0-6 [131 kB] Get:151 http://deb.debian.org/debian buster/main amd64 libtsan0 amd64 8.3.0-6 [283 kB] Get:152 http://deb.debian.org/debian buster/main amd64 libubsan1 amd64 8.3.0-6 [120 kB] Get:153 http://deb.debian.org/debian buster/main amd64 libmpx2 amd64 8.3.0-6 [11.4 kB] Get:154 http://deb.debian.org/debian buster/main amd64 libquadmath0 amd64 8.3.0-6 [133 kB] Get:155 http://deb.debian.org/debian buster/main amd64 libgcc-8-dev amd64 8.3.0-6 [2298 kB] Get:156 http://deb.debian.org/debian buster/main amd64 gcc-8 amd64 8.3.0-6 [9452 kB] Get:157 http://deb.debian.org/debian buster/main amd64 gcc amd64 4:8.3.0-1 [5196 B] Get:158 http://deb.debian.org/debian buster/main amd64 libc-dev-bin amd64 2.28-10+deb10u1 [276 kB] Get:159 http://deb.debian.org/debian buster/main amd64 linux-libc-dev amd64 4.19.249-2 [1530 kB] Get:160 http://deb.debian.org/debian buster/main amd64 libc6-dev amd64 2.28-10+deb10u1 [2692 kB] Get:161 http://deb.debian.org/debian buster/main amd64 libstdc++-8-dev amd64 8.3.0-6 [1532 kB] Get:162 http://deb.debian.org/debian buster/main amd64 g++-8 amd64 8.3.0-6 [9752 kB] Get:163 http://deb.debian.org/debian buster/main amd64 g++ amd64 4:8.3.0-1 [1644 B] Get:164 http://deb.debian.org/debian buster/main amd64 gdal-data all 2.4.0+dfsg-1 [744 kB] Get:165 http://deb.debian.org/debian buster/main amd64 libaec0 amd64 1.0.2-1 [20.1 kB] Get:166 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get:167 http://deb.debian.org/debian buster/main amd64 libedit2 amd64 3.1-20181209-1 [94.0 kB] Get:168 http://deb.debian.org/debian buster/main amd64 php-common all 2:69 [15.0 kB] Get:169 http://deb.debian.org/debian buster/main amd64 php7.3-common amd64 7.3.31-1~deb10u1 [962 kB] Get:170 http://deb.debian.org/debian buster/main amd64 php7.3-json amd64 7.3.31-1~deb10u1 [18.6 kB] Get:171 http://deb.debian.org/debian buster/main amd64 php7.3-opcache amd64 7.3.31-1~deb10u1 [184 kB] Get:172 http://deb.debian.org/debian buster/main amd64 php7.3-readline amd64 7.3.31-1~deb10u1 [12.0 kB] Get:173 http://deb.debian.org/debian buster/main amd64 libargon2-1 amd64 0~20171227-0.2 [19.6 kB] Get:174 http://deb.debian.org/debian buster/main amd64 libpcre2-8-0 amd64 10.32-5 [213 kB] Get:175 http://deb.debian.org/debian buster/main amd64 libsodium23 amd64 1.0.17-1 [158 kB] Get:176 http://deb.debian.org/debian buster/main amd64 php7.3-cli amd64 7.3.31-1~deb10u1 [1415 kB] Get:177 http://deb.debian.org/debian buster/main amd64 libapache2-mod-php7.3 amd64 7.3.31-1~deb10u1 [1360 kB] Get:178 http://deb.debian.org/debian buster/main amd64 libapache2-mod-php all 2:7.3+69 [6120 B] Get:179 http://deb.debian.org/debian buster/main amd64 libgfortran5 amd64 8.3.0-6 [581 kB] Get:180 http://deb.debian.org/debian buster/main amd64 libblas3 amd64 3.8.0-2 [148 kB] Get:181 http://deb.debian.org/debian buster/main amd64 liblapack3 amd64 3.8.0-2 [2110 kB] Get:182 http://deb.debian.org/debian buster/main amd64 libarpack2 amd64 3.7.0-2 [102 kB] Get:183 http://deb.debian.org/debian buster/main amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [161 kB] Get:184 http://deb.debian.org/debian buster/main amd64 libarmadillo9 amd64 1:9.200.7+dfsg-1 [88.6 kB] Get:185 http://deb.debian.org/debian buster/main amd64 libatm1 amd64 1:2.5.1-2 [71.0 kB] Get:186 http://deb.debian.org/debian buster/main amd64 libcarp-clan-perl all 6.07-1 [15.3 kB] Get:187 http://deb.debian.org/debian buster/main amd64 libbit-vector-perl amd64 7.4-1+b5 [146 kB] Get:188 http://deb.debian.org/debian buster/main amd64 libc-ares2 amd64 1.14.0-1+deb10u1 [86.1 kB] Get:189 http://deb.debian.org/debian buster/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:190 http://deb.debian.org/debian buster/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:191 http://deb.debian.org/debian buster/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:192 http://deb.debian.org/debian buster/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:193 http://deb.debian.org/debian buster/main amd64 libfcgi-perl amd64 0.78-2+b3 [39.0 kB] Get:194 http://deb.debian.org/debian buster/main amd64 libcgi-fast-perl all 1:2.13-1 [11.4 kB] Get:195 http://deb.debian.org/debian buster/main amd64 libcharls2 amd64 2.0.0+dfsg-1 [64.3 kB] Get:196 http://deb.debian.org/debian buster/main amd64 libcurl3-gnutls amd64 7.64.0-4+deb10u2 [330 kB] Get:197 http://deb.debian.org/debian buster/main amd64 libdap25 amd64 3.20.3-1 [557 kB] Get:198 http://deb.debian.org/debian buster/main amd64 libdapclient6v5 amd64 3.20.3-1 [202 kB] Get:199 http://deb.debian.org/debian buster/main amd64 libdapserver7v5 amd64 3.20.3-1 [131 kB] Get:200 http://deb.debian.org/debian buster/main amd64 libdate-calc-perl all 6.4-1 [194 kB] Get:201 http://deb.debian.org/debian buster/main amd64 libdate-calc-xs-perl amd64 6.4-1+b4 [55.1 kB] Get:202 http://deb.debian.org/debian buster/main amd64 libdate-manip-perl all 6.76-1 [930 kB] Get:203 http://deb.debian.org/debian buster/main amd64 libmariadb3 amd64 1:10.3.34-0+deb10u1 [173 kB] Get:204 http://deb.debian.org/debian buster/main amd64 libdbd-mysql-perl amd64 4.050-2 [121 kB] Get:205 http://deb.debian.org/debian buster/main amd64 libdeflate0 amd64 1.2-1 [55.4 kB] Get:206 http://deb.debian.org/debian buster/main amd64 libencode-locale-perl all 1.05-1 [13.7 kB] Get:207 http://deb.debian.org/debian buster/main amd64 libepsilon1 amd64 0.9.2+dfsg-4 [42.0 kB] Get:208 http://deb.debian.org/debian buster/main amd64 libpng16-16 amd64 1.6.36-6 [292 kB] Get:209 http://deb.debian.org/debian buster/main amd64 libfreetype6 amd64 2.9.1-3+deb10u3 [380 kB] Get:210 http://deb.debian.org/debian buster/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB] Get:211 http://deb.debian.org/debian buster/main amd64 libfreexl1 amd64 1.0.5-3 [34.1 kB] Get:212 http://deb.debian.org/debian buster/main amd64 libfyba0 amd64 4.1.1-6 [114 kB] Get:213 http://deb.debian.org/debian buster/main amd64 libgeos-3.7.1 amd64 3.7.1-1 [735 kB] Get:214 http://deb.debian.org/debian buster/main amd64 libgeos-c1v5 amd64 3.7.1-1 [299 kB] Get:215 http://deb.debian.org/debian buster/main amd64 proj-data all 5.2.0-1 [6986 kB] Get:216 http://deb.debian.org/debian buster/main amd64 libproj13 amd64 5.2.0-1 [225 kB] Get:217 http://deb.debian.org/debian buster/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:218 http://deb.debian.org/debian buster/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+deb10u1 [133 kB] Get:219 http://deb.debian.org/debian buster/main amd64 libwebp6 amd64 0.6.1-2+deb10u1 [261 kB] Get:220 http://deb.debian.org/debian buster/main amd64 libtiff5 amd64 4.1.0+git191117-2~deb10u4 [271 kB] Get:221 http://deb.debian.org/debian buster/main amd64 libgeotiff2 amd64 1.4.3-1 [72.0 kB] Get:222 http://deb.debian.org/debian buster/main amd64 libgif7 amd64 5.1.4-3 [43.3 kB] Get:223 http://deb.debian.org/debian buster/main amd64 libhdf4-0-alt amd64 4.2.13-4 [277 kB] Get:224 http://deb.debian.org/debian buster/main amd64 libsz2 amd64 1.0.2-1 [6676 B] Get:225 http://deb.debian.org/debian buster/main amd64 libhdf5-103 amd64 1.10.4+repack-10 [1325 kB] Get:226 http://deb.debian.org/debian buster/main amd64 libjson-c3 amd64 0.12.1+ds-2+deb10u1 [27.3 kB] Get:227 http://deb.debian.org/debian buster/main amd64 libminizip1 amd64 1.1-8+b1 [20.4 kB] Get:228 http://deb.debian.org/debian buster/main amd64 liburiparser1 amd64 0.9.1-1+deb10u1 [48.1 kB] Get:229 http://deb.debian.org/debian buster/main amd64 libkmlbase1 amd64 1.3.0-7 [48.9 kB] Get:230 http://deb.debian.org/debian buster/main amd64 libkmldom1 amd64 1.3.0-7 [172 kB] Get:231 http://deb.debian.org/debian buster/main amd64 libkmlengine1 amd64 1.3.0-7 [78.4 kB] Get:232 http://deb.debian.org/debian buster/main amd64 libkmlconvenience1 amd64 1.3.0-7 [50.1 kB] Get:233 http://deb.debian.org/debian buster/main amd64 libkmlregionator1 amd64 1.3.0-7 [25.1 kB] Get:234 http://deb.debian.org/debian buster/main amd64 libkmlxsd1 amd64 1.3.0-7 [34.6 kB] Get:235 http://deb.debian.org/debian buster/main amd64 libnetcdf13 amd64 1:4.6.2-1 [403 kB] Get:236 http://deb.debian.org/debian buster/main amd64 libltdl7 amd64 2.4.6-9 [390 kB] Get:237 http://deb.debian.org/debian buster/main amd64 libodbc1 amd64 2.3.6-0.1 [223 kB] Get:238 http://deb.debian.org/debian buster/main amd64 libogdi3.2 amd64 3.2.1+ds-4 [241 kB] Get:239 http://deb.debian.org/debian buster/main amd64 libopenjp2-7 amd64 2.3.0-2+deb10u2 [158 kB] Get:240 http://deb.debian.org/debian buster/main amd64 liblcms2-2 amd64 2.9-3 [145 kB] Get:241 http://deb.debian.org/debian buster/main amd64 libnspr4 amd64 2:4.20-1 [112 kB] Get:242 http://deb.debian.org/debian buster/main amd64 libnss3 amd64 2:3.42.1-1+deb10u5 [1160 kB] Get:243 http://deb.debian.org/debian buster/main amd64 libpoppler82 amd64 0.71.0-5 [1507 kB] Get:244 http://deb.debian.org/debian buster/main amd64 libpq5 amd64 11.16-0+deb10u1 [172 kB] Get:245 http://deb.debian.org/debian buster/main amd64 libqhull7 amd64 2015.2-4 [196 kB] Get:246 http://deb.debian.org/debian buster/main amd64 libspatialite7 amd64 4.3.0a-5+b2 [1256 kB] Get:247 http://deb.debian.org/debian buster/main amd64 libxerces-c3.2 amd64 3.2.2+debian-1+deb10u1 [886 kB] Get:248 http://deb.debian.org/debian buster/main amd64 odbcinst amd64 2.3.6-0.1 [48.4 kB] Get:249 http://deb.debian.org/debian buster/main amd64 odbcinst1debian2 amd64 2.3.6-0.1 [78.1 kB] Get:250 http://deb.debian.org/debian buster/main amd64 libgdal20 amd64 2.4.0+dfsg-1+b1 [6171 kB] Get:251 http://deb.debian.org/debian buster/main amd64 libgpm2 amd64 1.20.7-5 [35.1 kB] Get:252 http://deb.debian.org/debian buster/main amd64 libhtml-template-perl all 2.97-1 [66.0 kB] Get:253 http://deb.debian.org/debian buster/main amd64 libhts2 amd64 1.9-12~deb10u1 [305 kB] Get:254 http://deb.debian.org/debian buster/main amd64 libtimedate-perl all 2.3000-2+deb10u1 [38.1 kB] Get:255 http://deb.debian.org/debian buster/main amd64 libhttp-date-perl all 6.02-1 [10.7 kB] Get:256 http://deb.debian.org/debian buster/main amd64 libio-html-perl all 1.001-1 [17.6 kB] Get:257 http://deb.debian.org/debian buster/main amd64 liblwp-mediatypes-perl all 6.02-1 [22.1 kB] Get:258 http://deb.debian.org/debian buster/main amd64 libhttp-message-perl all 6.18-1 [77.8 kB] Get:259 http://deb.debian.org/debian buster/main amd64 libimagequant0 amd64 2.12.2-1.1 [32.5 kB] Get:260 http://deb.debian.org/debian buster/main amd64 libio-stringy-perl all 2.111-3 [56.5 kB] Get:261 http://deb.debian.org/debian buster/main amd64 libuv1 amd64 1.24.1-1+deb10u1 [110 kB] Get:262 http://deb.debian.org/debian buster/main amd64 libnode64 amd64 10.24.0~dfsg-1~deb10u1 [5631 kB] Get:263 http://deb.debian.org/debian buster/main amd64 libole-storage-lite-perl all 0.19-2+deb10u1 [24.0 kB] Get:264 http://deb.debian.org/debian buster/main amd64 libpam-cap amd64 1:2.25-2 [14.3 kB] Get:265 http://deb.debian.org/debian buster/main amd64 libparse-recdescent-perl all 1.967015+dfsg-2 [159 kB] Get:266 http://deb.debian.org/debian buster/main amd64 libsasl2-modules amd64 2.1.27+dfsg-1+deb10u2 [104 kB] Get:267 http://deb.debian.org/debian buster/main amd64 libspreadsheet-writeexcel-perl all 2.40-1 [550 kB] Get:268 http://deb.debian.org/debian buster/main amd64 libterm-readkey-perl amd64 2.38-1 [27.4 kB] Get:269 http://deb.debian.org/debian buster/main amd64 libwebpdemux2 amd64 0.6.1-2+deb10u1 [87.6 kB] Get:270 http://deb.debian.org/debian buster/main amd64 libwebpmux3 amd64 0.6.1-2+deb10u1 [97.8 kB] Get:271 http://deb.debian.org/debian buster/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:272 http://deb.debian.org/debian buster/main amd64 manpages-dev all 4.16-2 [2232 kB] Get:273 http://deb.debian.org/debian buster/main amd64 nodejs amd64 10.24.0~dfsg-1~deb10u1 [87.3 kB] Get:274 http://deb.debian.org/debian buster/main amd64 nodejs-doc all 10.24.0~dfsg-1~deb10u1 [974 kB] Get:275 http://deb.debian.org/debian buster/main amd64 php7.3-xml amd64 7.3.31-1~deb10u1 [109 kB] Get:276 http://deb.debian.org/debian buster/main amd64 php-xml all 2:7.3+69 [6012 B] Get:277 http://deb.debian.org/debian buster/main amd64 php-pear all 1:1.10.6+submodules+notgz-1.1+deb10u2 [285 kB] Get:278 http://deb.debian.org/debian buster/main amd64 php-mdb2 all 2.5.0b5-2 [115 kB] Get:279 http://deb.debian.org/debian buster/main amd64 php7.3-mysql amd64 7.3.31-1~deb10u1 [119 kB] Get:280 http://deb.debian.org/debian buster/main amd64 php-mysql all 2:7.3+69 [5992 B] Get:281 http://deb.debian.org/debian buster/main amd64 php-mdb2-driver-mysql all 1.5.0b4-2 [53.3 kB] Get:282 http://deb.debian.org/debian buster/main amd64 proj-bin amd64 5.2.0-1 [105 kB] Get:283 http://deb.debian.org/debian buster/main amd64 publicsuffix all 20220811.1734-0+deb10u1 [127 kB] Get:284 http://deb.debian.org/debian buster/main amd64 python3-soupsieve all 1.8+dfsg-1 [27.6 kB] Get:285 http://deb.debian.org/debian buster/main amd64 python3-bs4 all 4.7.1-1 [94.1 kB] Get:286 http://deb.debian.org/debian buster/main amd64 python3-numpy amd64 1:1.16.2-1 [2119 kB] Get:287 http://deb.debian.org/debian buster/main amd64 python3-gdal amd64 2.4.0+dfsg-1+b1 [601 kB] Get:288 http://deb.debian.org/debian buster/main amd64 python3-webencodings all 0.5.1-1 [10.9 kB] Get:289 http://deb.debian.org/debian buster/main amd64 python3-html5lib all 1.0.1-1 [89.5 kB] Get:290 http://deb.debian.org/debian buster/main amd64 python3-olefile all 0.46-1 [35.9 kB] Get:291 http://deb.debian.org/debian buster/main amd64 python3-pil amd64 5.4.1-2+deb10u3 [395 kB] Get:292 http://deb.debian.org/debian buster/main amd64 python3-scipy amd64 1.1.0-7 [10.0 MB] Get:293 http://deb.debian.org/debian buster/main amd64 python3-sparqlwrapper all 1.8.2-0.1 [28.4 kB] Get:294 http://deb.debian.org/debian buster/main amd64 python3-yaml amd64 3.13-2 [121 kB] Get:295 http://deb.debian.org/debian buster/main amd64 samtools amd64 1.9-4 [443 kB] Get:296 http://deb.debian.org/debian buster/main amd64 ssl-cert all 1.0.39 [20.8 kB] Get:297 http://deb.debian.org/debian buster/main amd64 stacks amd64 2.2+dfsg-1 [950 kB] Get:298 http://deb.debian.org/debian buster/main amd64 stacks-web all 2.2+dfsg-1 [89.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 174 MB in 5s (32.5 MB/s) Selecting previously unselected package perl-modules-5.28. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6464 files and directories currently installed.) Preparing to unpack .../00-perl-modules-5.28_5.28.1-6+deb10u1_all.deb ... Unpacking perl-modules-5.28 (5.28.1-6+deb10u1) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../01-libgdbm6_1.18.1-4_amd64.deb ... Unpacking libgdbm6:amd64 (1.18.1-4) ... Selecting previously unselected package libgdbm-compat4:amd64. 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Setting up python2.7-minimal (2.7.16-2+deb10u1) ... Setting up python2-minimal (2.7.16-1) ... Selecting previously unselected package python2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9247 files and directories currently installed.) Preparing to unpack .../python2_2.7.16-1_amd64.deb ... Unpacking python2 (2.7.16-1) ... Setting up python-minimal (2.7.16-1) ... Selecting previously unselected package python. (Reading database ... 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Setting up libkeyutils1:amd64 (1.6-6) ... Setting up libpsl5:amd64 (0.20.2-2) ... Setting up libreadline5:amd64 (5.2+dfsg-3+b13) ... Setting up libsodium23:amd64 (1.0.17-1) ... Setting up libgpm2:amd64 (1.20.7-5) ... Setting up mime-support (3.62) ... Setting up proj-data (5.2.0-1) ... Setting up libmagic-mgc (1:5.35-4+deb10u2) ... Setting up libcharls2:amd64 (2.0.0+dfsg-1) ... Setting up libminizip1:amd64 (1.1-8+b1) ... Setting up gawk (1:4.2.1+dfsg-1) ... Setting up psmisc (23.2-1+deb10u1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up manpages (4.16-2) ... Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-1) ... Setting up libargon2-1:amd64 (0~20171227-0.2) ... Setting up libprocps7:amd64 (2:3.3.15-2) ... Setting up libbrotli1:amd64 (1.0.7-2+deb10u1) ... Setting up libsqlite3-0:amd64 (3.27.2-3+deb10u1) ... Setting up libsasl2-modules:amd64 (2.1.27+dfsg-1+deb10u2) ... Setting up libproj13:amd64 (5.2.0-1) ... Setting up binutils-common:amd64 (2.31.1-16) ... Setting up libnghttp2-14:amd64 (1.36.0-2+deb10u1) ... Setting up libmagic1:amd64 (1:5.35-4+deb10u2) ... Setting up libdeflate0:amd64 (1.2-1) ... Setting up libapr1:amd64 (1.6.5-1+b1) ... Setting up linux-libc-dev:amd64 (4.19.249-2) ... Setting up proj-bin (5.2.0-1) ... Setting up libqhull7:amd64 (2015.2-4) ... Setting up krb5-locales (1.17-3+deb10u4) ... Setting up libc-ares2:amd64 (1.14.0-1+deb10u1) ... Setting up file (1:5.35-4+deb10u2) ... Setting up libgomp1:amd64 (8.3.0-6) ... Setting up libatm1:amd64 (1:2.5.1-2) ... Setting up bzip2 (1.0.6-9.2~deb10u1) ... Setting up libldap-common (2.4.47+dfsg-3+deb10u7) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libgeos-3.7.1:amd64 (3.7.1-1) ... Setting up libaec0:amd64 (1.0.2-1) ... Setting up libicu63:amd64 (63.1-6+deb10u3) ... Setting up gdal-data (2.4.0+dfsg-1) ... Setting up libcap2:amd64 (1:2.25-2) ... Setting up libjansson4:amd64 (2.12-1) ... Setting up libsnappy1v5:amd64 (1.1.7-1) ... Setting up poppler-data (0.4.9-2) ... Setting up libkrb5support0:amd64 (1.17-3+deb10u4) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-1+deb10u2) ... Setting up libpython2.7-stdlib:amd64 (2.7.16-2+deb10u1) ... Setting up libcap2-bin (1:2.25-2) ... Setting up libasan5:amd64 (8.3.0-6) ... Setting up libuv1:amd64 (1.24.1-1+deb10u1) ... Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+deb10u1) ... Setting up libwrap0:amd64 (7.6.q-28) ... Setting up libnspr4:amd64 (2:4.20-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2) ... Setting up socat (1.7.3.2-2) ... Setting up libncurses6:amd64 (6.1+20181013-2+deb10u2) ... Setting up xz-utils (5.2.4-1+deb10u1) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode Setting up libquadmath0:amd64 (8.3.0-6) ... Setting up libimagequant0:amd64 (2.12.2-1.1) ... Setting up libpng16-16:amd64 (1.6.36-6) ... Setting up libmpc3:amd64 (1.1.0-1) ... Setting up libmnl0:amd64 (1.0.4-2) ... Setting up libatomic1:amd64 (8.3.0-6) ... Setting up libwebp6:amd64 (0.6.1-2+deb10u1) ... Setting up libgeos-c1v5:amd64 (3.7.1-1) ... Setting up libmariadb3:amd64 (1:10.3.34-0+deb10u1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libpcre2-8-0:amd64 (10.32-5) ... Setting up libk5crypto3:amd64 (1.17-3+deb10u4) ... Setting up libxtables12:amd64 (1.8.2-4) ... Setting up libltdl7:amd64 (2.4.6-9) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-1+deb10u2) ... Setting up libgfortran5:amd64 (8.3.0-6) ... Setting up lsof (4.91+dfsg-1) ... Setting up libhdf4-0-alt (4.2.13-4) ... Setting up nodejs-doc (10.24.0~dfsg-1~deb10u1) ... Setting up galera-3 (25.3.25-2) ... Setting up libmpx2:amd64 (8.3.0-6) ... Setting up libubsan1:amd64 (8.3.0-6) ... Setting up libgif7:amd64 (5.1.4-3) ... Setting up liburiparser1:amd64 (0.9.1-1+deb10u1) ... Setting up libisl19:amd64 (0.20-2) ... Setting up libfreexl1:amd64 (1.0.5-3) ... Setting up liblua5.2-0:amd64 (5.2.4-1.1+b2) ... Setting up sensible-utils (0.0.12) ... Setting up libfyba0:amd64 (4.1.1-6) ... Setting up procps (2:3.3.15-2) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libkmlbase1:amd64 (1.3.0-7) ... Setting up libopenjp2-7:amd64 (2.3.0-2+deb10u2) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up netbase (5.6) ... Setting up libkrb5-3:amd64 (1.17-3+deb10u4) ... Setting up libtiff5:amd64 (4.1.0+git191117-2~deb10u4) ... Setting up apache2-data (2.4.38-3+deb10u8) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libbinutils:amd64 (2.31.1-16) ... Setting up cpp-8 (8.3.0-6) ... Setting up libaio1:amd64 (0.3.112-3) ... Setting up libc-dev-bin (2.28-10+deb10u1) ... Setting up openssl (1.1.1n-0+deb10u3) ... Setting up libwebpmux3:amd64 (0.6.1-2+deb10u1) ... Setting up libbsd0:amd64 (0.9.1-2+deb10u1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libpam-cap:amd64 (1:2.25-2) ... Setting up publicsuffix (20220811.1734-0+deb10u1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+deb10u4) ... Setting up libcc1-0:amd64 (8.3.0-6) ... Setting up liblsan0:amd64 (8.3.0-6) ... Setting up libsz2:amd64 (1.0.2-1) ... Setting up libjs-bootstrap (3.4.1+dfsg-1) ... Setting up libitm1:amd64 (8.3.0-6) ... Setting up libkmlxsd1:amd64 (1.3.0-7) ... Setting up libgdbm6:amd64 (1.18.1-4) ... Setting up libpopt0:amd64 (1.16-12) ... Setting up binutils-x86-64-linux-gnu (2.31.1-16) ... Setting up libaprutil1:amd64 (1.6.1-4) ... Setting up libtsan0:amd64 (8.3.0-6) ... Setting up libkmldom1:amd64 (1.3.0-7) ... Setting up libspatialite7:amd64 (4.3.0a-5+b2) ... Setting up php-common (2:69) ... Setting up manpages-dev (4.16-2) ... Setting up libpython3.7-stdlib:amd64 (3.7.3-2+deb10u3) ... Setting up libogdi3.2 (3.2.1+ds-4) ... Setting up libkmlengine1:amd64 (1.3.0-7) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libkmlconvenience1:amd64 (1.3.0-7) ... Setting up libpython2-stdlib:amd64 (2.7.16-1) ... Setting up iproute2 (4.20.0-2+deb10u1) ... Setting up libwebpdemux2:amd64 (0.6.1-2+deb10u1) ... Setting up libedit2:amd64 (3.1-20181209-1) ... Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-3+deb10u7) ... Setting up libdap25:amd64 (3.20.3-1) ... Setting up libnss3:amd64 (2:3.42.1-1+deb10u5) ... Setting up binutils (2.31.1-16) ... Setting up libaprutil1-ldap:amd64 (1.6.1-4) ... Setting up libepsilon1:amd64 (0.9.2+dfsg-4) ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.6.1-4) ... Setting up libdapserver7v5:amd64 (3.20.3-1) ... Setting up python2 (2.7.16-1) ... Setting up ca-certificates (20200601~deb10u2) ... Updating certificates in /etc/ssl/certs... 137 added, 0 removed; done. Setting up libpython-stdlib:amd64 (2.7.16-1) ... Setting up libgeotiff2:amd64 (1.4.3-1) ... Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libfreetype6:amd64 (2.9.1-3+deb10u3) ... Setting up ssl-cert (1.0.39) ... Setting up libkmlregionator1:amd64 (1.3.0-7) ... Setting up libhdf5-103:amd64 (1.10.4+repack-10) ... Setting up libnode64:amd64 (10.24.0~dfsg-1~deb10u1) ... Setting up mariadb-server-core-10.3 (1:10.3.34-0+deb10u1) ... Setting up libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... Setting up libgdbm-compat4:amd64 (1.18.1-4) ... Setting up libodbc1:amd64 (2.3.6-0.1) ... Setting up ucf (3.0038+nmu1) ... Setting up libgcc-8-dev:amd64 (8.3.0-6) ... Setting up libperl5.28:amd64 (5.28.1-6+deb10u1) ... Setting up mariadb-client-core-10.3 (1:10.3.34-0+deb10u1) ... Setting up cpp (4:8.3.0-1) ... Setting up libxslt1.1:amd64 (1.1.32-2.2~deb10u1) ... Setting up libcurl4:amd64 (7.64.0-4+deb10u2) ... Setting up libc6-dev:amd64 (2.28-10+deb10u1) ... Setting up python (2.7.16-1) ... Setting up rsync (3.1.3-6) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libpython3-stdlib:amd64 (3.7.3-1) ... Setting up libstdc++-8-dev:amd64 (8.3.0-6) ... Setting up apache2-utils (2.4.38-3+deb10u8) ... Setting up python3.7 (3.7.3-2+deb10u3) ... Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gcc-8 (8.3.0-6) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libarpack2:amd64 (3.7.0-2) ... Setting up libpq5:amd64 (11.16-0+deb10u1) ... Setting up libsuperlu5:amd64 (5.2.1+dfsg1-4) ... Setting up libcurl3-gnutls:amd64 (7.64.0-4+deb10u2) ... Setting up libnetcdf13:amd64 (1:4.6.2-1) ... Setting up python3 (3.7.3-1) ... Setting up nodejs (10.24.0~dfsg-1~deb10u1) ... update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode Setting up python3-webencodings (0.5.1-1) ... Setting up python3-psutil (5.5.1-1) ... Setting up gcc (4:8.3.0-1) ... Setting up python3-six (1.12.0-1) ... Setting up python3-isodate (0.6.0-1) ... Setting up python3-pil:amd64 (5.4.1-2+deb10u3) ... Setting up python3-decorator (4.3.0-1.1) ... Setting up perl (5.28.1-6+deb10u1) ... Setting up php7.3-common (7.3.31-1~deb10u1) ... Creating config file /etc/php/7.3/mods-available/calendar.ini with new version Creating config file /etc/php/7.3/mods-available/ctype.ini with new version Creating config file /etc/php/7.3/mods-available/exif.ini with new version Creating config file /etc/php/7.3/mods-available/fileinfo.ini with new version Creating config file /etc/php/7.3/mods-available/ftp.ini with new version Creating config file /etc/php/7.3/mods-available/gettext.ini with new version Creating config file /etc/php/7.3/mods-available/iconv.ini with new version Creating config file /etc/php/7.3/mods-available/pdo.ini with new version Creating config file /etc/php/7.3/mods-available/phar.ini with new version Creating config file /etc/php/7.3/mods-available/posix.ini with new version Creating config file /etc/php/7.3/mods-available/shmop.ini with new version Creating config file /etc/php/7.3/mods-available/sockets.ini with new version Creating config file /etc/php/7.3/mods-available/sysvmsg.ini with new version Creating config file /etc/php/7.3/mods-available/sysvsem.ini with new version Creating config file /etc/php/7.3/mods-available/sysvshm.ini with new version Creating config file /etc/php/7.3/mods-available/tokenizer.ini with new version Setting up python3-pyparsing (2.2.0+dfsg1-2) ... Setting up python3-certifi (2018.8.24-1) ... Setting up mariadb-client-10.3 (1:10.3.34-0+deb10u1) ... Setting up python3-idna (2.6-1) ... Setting up libio-html-perl (1.001-1) ... Setting up php7.3-mysql (7.3.31-1~deb10u1) ... Creating config file /etc/php/7.3/mods-available/mysqlnd.ini with new version Creating config file /etc/php/7.3/mods-available/mysqli.ini with new version Creating config file /etc/php/7.3/mods-available/pdo_mysql.ini with new version Setting up python3-typing-extensions (3.7.2-1) ... Setting up python3-html5lib (1.0.1-1) ... Setting up python3-urllib3 (1.24.1-1) ... Setting up php7.3-xml (7.3.31-1~deb10u1) ... Creating config file /etc/php/7.3/mods-available/dom.ini with new version Creating config file /etc/php/7.3/mods-available/simplexml.ini with new version Creating config file /etc/php/7.3/mods-available/wddx.ini with new version Creating config file /etc/php/7.3/mods-available/xml.ini with new version Creating config file /etc/php/7.3/mods-available/xmlreader.ini with new version Creating config file /etc/php/7.3/mods-available/xmlwriter.ini with new version Creating config file /etc/php/7.3/mods-available/xsl.ini with new version Setting up libtimedate-perl (2.3000-2+deb10u1) ... Setting up python3-ruamel.yaml (0.15.34-1+b1) ... Setting up g++-8 (8.3.0-6) ... Setting up libparse-recdescent-perl (1.967015+dfsg-2) ... Setting up python3-lxml:amd64 (4.3.2-1+deb10u4) ... Setting up python3-rdflib (4.2.2-2) ... Setting up php7.3-opcache (7.3.31-1~deb10u1) ... Creating config file /etc/php/7.3/mods-available/opcache.ini with new version Setting up libdapclient6v5:amd64 (3.20.3-1) ... Setting up libfcgi-perl (0.78-2+b3) ... Setting up python3-dateutil (2.7.3-3) ... Setting up libcarp-clan-perl (6.07-1) ... Setting up libfontconfig1:amd64 (2.13.1-2) ... Setting up python3-shellescape (3.4.1-3) ... Setting up libarmadillo9 (1:9.200.7+dfsg-1) ... Setting up libterm-readkey-perl (2.38-1) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up python3-mistune (0.8.4-1) ... Setting up python3-soupsieve (1.8+dfsg-1) ... Setting up liburi-perl (1.76-1) ... Setting up libdbi-perl:amd64 (1.642-1+deb10u2) ... Setting up libdate-manip-perl (6.76-1) ... Setting up python3-pkg-resources (40.8.0-1) ... Setting up python3-distutils (3.7.3-1) ... Setting up php-xml (2:7.3+69) ... Setting up python3-lockfile (1:0.12.2-2) ... Setting up libhttp-date-perl (6.02-1) ... Setting up python3-rdflib-jsonld (0.4.0-4) ... Setting up php-mysql (2:7.3+69) ... Setting up libxerces-c3.2:amd64 (3.2.2+debian-1+deb10u1) ... Setting up python3-sparqlwrapper (1.8.2-0.1) ... Setting up libhts2:amd64 (1.9-12~deb10u1) ... Setting up php7.3-json (7.3.31-1~deb10u1) ... Creating config file /etc/php/7.3/mods-available/json.ini with new version Setting up php7.3-readline (7.3.31-1~deb10u1) ... Creating config file /etc/php/7.3/mods-available/readline.ini with new version Setting up python3-typed-ast (1.3.1-1) ... Setting up libio-stringy-perl (2.111-3) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up python3-mypy-extensions (0.4.1-1) ... Setting up python3-olefile (0.46-1) ... Setting up liblwp-mediatypes-perl (6.02-1) ... Setting up libpoppler82:amd64 (0.71.0-5) ... Setting up python3-yaml (3.13-2) ... Setting up libencode-locale-perl (1.05-1) ... Setting up apache2-bin (2.4.38-3+deb10u8) ... Setting up python3-networkx (2.2-1) ... Setting up libspreadsheet-writeexcel-perl (2.40-1) ... Setting up python3-bs4 (4.7.1-1) ... Setting up python3-prov (1.5.2-1) ... Setting up samtools (1.9-4) ... Setting up libbit-vector-perl (7.4-1+b5) ... Setting up stacks (2.2+dfsg-1) ... Setting up python3-chardet (3.0.4-3) ... Setting up python3-requests (2.21.0-1) ... Setting up libdbd-mysql-perl:amd64 (4.050-2) ... Setting up python3-mypy (0.670-2) ... Setting up python3-numpy (1:1.16.2-1) ... Setting up libole-storage-lite-perl (0.19-2+deb10u1) ... Setting up g++ (4:8.3.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up php7.3-cli (7.3.31-1~deb10u1) ... update-alternatives: using /usr/bin/php7.3 to provide /usr/bin/php (php) in auto mode update-alternatives: using /usr/bin/phar7.3 to provide /usr/bin/phar (phar) in auto mode update-alternatives: using /usr/bin/phar.phar7.3 to provide /usr/bin/phar.phar (phar.phar) in auto mode Creating config file /etc/php/7.3/cli/php.ini with new version Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up mariadb-server-10.3 (1:10.3.34-0+deb10u1) ... invoke-rc.d: could not determine current runlevel [....] Starting MariaDB database server: mysqld[ESC][?25l[ESC]7[ESC][1G[[ESC][32m ok [ESC][39;49m[ESC]8[ESC][34h[ESC][?25h. Setting up python3-cachecontrol (0.11.7-1) ... Setting up libhttp-message-perl (6.18-1) ... Setting up php-pear (1:1.10.6+submodules+notgz-1.1+deb10u2) ... Setting up python3-scipy (1.1.0-7) ... Setting up libdate-calc-perl (6.4-1) ... Setting up libdate-calc-xs-perl (6.4-1+b4) ... Setting up apache2 (2.4.38-3+deb10u8) ... Enabling module mpm_event. Enabling module authz_core. Enabling module authz_host. Enabling module authn_core. Enabling module auth_basic. Enabling module access_compat. Enabling module authn_file. Enabling module authz_user. Enabling module alias. Enabling module dir. Enabling module autoindex. Enabling module env. Enabling module mime. Enabling module negotiation. Enabling module setenvif. Enabling module filter. Enabling module deflate. Enabling module status. Enabling module reqtimeout. Enabling conf charset. Enabling conf localized-error-pages. Enabling conf other-vhosts-access-log. Enabling conf security. Enabling conf serve-cgi-bin. Enabling site 000-default. invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libcgi-pm-perl (4.40-1) ... Setting up python3-schema-salad (3.0.20181206233650-2) ... Setting up libapache2-mod-php7.3 (7.3.31-1~deb10u1) ... Creating config file /etc/php/7.3/apache2/php.ini with new version Module mpm_event disabled. Enabling module mpm_prefork. apache2_switch_mpm Switch to prefork invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. apache2_invoke: Enable module php7.3 invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up default-mysql-server (1.0.5) ... Setting up cwltool (1.0.20181217162649+dfsg-10) ... Setting up php-mdb2 (2.5.0b5-2) ... Setting up libhtml-template-perl (2.97-1) ... Setting up php-mdb2-driver-mysql (1.5.0b4-2) ... Setting up libapache2-mod-php (2:7.3+69) ... Setting up stacks-web (2.2+dfsg-1) ... apache2_invoke: Enable configuration stacks-web invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of reload. Setting up libcgi-fast-perl (1:2.13-1) ... Setting up odbcinst (2.3.6-0.1) ... Setting up odbcinst1debian2:amd64 (2.3.6-0.1) ... Setting up libgdal20 (2.4.0+dfsg-1+b1) ... Setting up python3-gdal (2.4.0+dfsg-1+b1) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... Processing triggers for ca-certificates (20200601~deb10u2) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 1m37.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', '-y', 'install', 'stacks-web=2.2+dfsg-1'] 1m37.9s INFO: Running scripts post_install 1m37.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_install_exceptions'] 1m38.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_install_exceptions'] 1m38.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 1m39.2s DUMP: COMMAND PID USER FD TYPE DEVICE SIZE/OFF NODE NAME mysqld_sa 272281 root cwd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ mysqld_sa 272281 root rtd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ mysqld_sa 272281 root txt REG 0,32 121464 1469105026 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/bin/dash mysqld_sa 272281 root mem REG 0,32 1820400 1469103863 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libc-2.28.so mysqld_sa 272281 root mem REG 0,32 165632 1469103867 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/ld-2.28.so mysqld_sa 272281 root 1w CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null mysqld_sa 272281 root 2w CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null mysqld_sa 272281 root 10r REG 0,32 30726 1469162001 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/bin/mysqld_safe mysqld 272462 150 cwd DIR 0,32 300 1469161542 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql mysqld 272462 150 rtd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ mysqld 272462 150 txt REG 0,32 20951416 1469160165 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/sbin/mysqld mysqld 272462 150 mem REG 0,32 24576 1469245064 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/tc.log mysqld 272462 150 mem REG 0,32 55792 1469103853 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libnss_files-2.28.so mysqld 272462 150 mem REG 0,32 137424 1469103797 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgpg-error.so.0.26.1 mysqld 272462 150 mem REG 0,32 1168056 1469103804 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgcrypt.so.20.2.4 mysqld 272462 150 mem REG 0,32 158400 1469103784 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/liblzma.so.5.2.4 mysqld 272462 150 mem REG 0,32 35808 1469103846 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/librt-2.28.so mysqld 272462 150 mem REG 0,32 100712 1469103805 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgcc_s.so.1 mysqld 272462 150 mem REG 0,32 1820400 1469103863 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libc-2.28.so mysqld 272462 150 mem REG 0,32 146968 1469103848 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libpthread-2.28.so mysqld 272462 150 mem REG 0,32 1579448 1469103860 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libm-2.28.so mysqld 272462 150 mem REG 0,32 1570256 1469103743 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.25 mysqld 272462 150 mem REG 0,32 14592 1469103861 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libdl-2.28.so mysqld 272462 150 mem REG 0,32 651472 1469103741 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libsystemd.so.0.25.0 mysqld 272462 150 mem REG 0,32 43328 1469103862 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libcrypt-2.28.so mysqld 272462 150 mem REG 0,32 468944 1469103761 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libpcre.so.3.13.3 mysqld 272462 150 mem REG 0,32 117184 1469103724 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libz.so.1.2.11 mysqld 272462 150 mem REG 0,32 14184 1469151726 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libaio.so.1.0.1 mysqld 272462 150 mem REG 0,32 31104 1469152170 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libsnappy.so.1.1.7 mysqld 272462 150 mem REG 0,32 121184 1469103786 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/liblz4.so.1.8.3 mysqld 272462 150 mem REG 0,32 165632 1469103867 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/ld-2.28.so mysqld 272462 150 0r CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null mysqld 272462 150 4uW REG 0,32 52 1469236258 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/aria_log_control mysqld 272462 150 5r DIR 0,32 300 1469161542 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql mysqld 272462 150 6u REG 0,32 16384 1469236295 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/aria_log.00000001 mysqld 272462 150 7u REG 0,32 12582912 1469236310 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/ibdata1 mysqld 272462 150 11u REG 0,32 50331648 1469236311 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/ib_logfile0 mysqld 272462 150 12u REG 0,32 50331648 1469236312 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/ib_logfile1 mysqld 272462 150 13u REG 0,32 12582912 1469245063 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/ibtmp1 mysqld 272462 150 15u REG 0,32 98304 1469236388 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/mysql/innodb_table_stats.ibd mysqld 272462 150 16u REG 0,32 147456 1469236392 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/mysql/transaction_registry.ibd mysqld 272462 150 17u REG 0,32 98304 1469236390 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/mysql/innodb_index_stats.ibd mysqld 272462 150 18u REG 0,32 24576 1469245064 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/tc.log mysqld 272462 150 19u REG 0,32 98304 1469236406 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/mysql/gtid_slave_pos.ibd mysqld 272462 150 42u REG 0,32 0 1469245067 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/multi-master.info logger 272463 root cwd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ logger 272463 root rtd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ logger 272463 root txt REG 0,32 47792 1469105135 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/bin/logger logger 272463 root mem REG 0,32 137424 1469103797 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgpg-error.so.0.26.1 logger 272463 root mem REG 0,32 146968 1469103848 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libpthread-2.28.so logger 272463 root mem REG 0,32 1168056 1469103804 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgcrypt.so.20.2.4 logger 272463 root mem REG 0,32 121184 1469103786 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/liblz4.so.1.8.3 logger 272463 root mem REG 0,32 158400 1469103784 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/liblzma.so.5.2.4 logger 272463 root mem REG 0,32 35808 1469103846 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/librt-2.28.so logger 272463 root mem REG 0,32 1820400 1469103863 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libc-2.28.so logger 272463 root mem REG 0,32 651472 1469103741 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libsystemd.so.0.25.0 logger 272463 root mem REG 0,32 165632 1469103867 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/ld-2.28.so logger 272463 root 1w CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null logger 272463 root 2w CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null 1m39.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 1m39.2s ERROR: WARN: Processes are running inside chroot: COMMAND PID USER FD TYPE DEVICE SIZE/OFF NODE NAME mysqld_sa 272281 root cwd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ mysqld_sa 272281 root rtd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ mysqld_sa 272281 root txt REG 0,32 121464 1469105026 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/bin/dash mysqld_sa 272281 root mem REG 0,32 1820400 1469103863 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libc-2.28.so mysqld_sa 272281 root mem REG 0,32 165632 1469103867 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/ld-2.28.so mysqld_sa 272281 root 1w CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null mysqld_sa 272281 root 2w CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null mysqld_sa 272281 root 10r REG 0,32 30726 1469162001 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/bin/mysqld_safe mysqld 272462 150 cwd DIR 0,32 300 1469161542 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql mysqld 272462 150 rtd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ mysqld 272462 150 txt REG 0,32 20951416 1469160165 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/sbin/mysqld mysqld 272462 150 mem REG 0,32 24576 1469245064 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/tc.log mysqld 272462 150 mem REG 0,32 55792 1469103853 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libnss_files-2.28.so mysqld 272462 150 mem REG 0,32 137424 1469103797 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgpg-error.so.0.26.1 mysqld 272462 150 mem REG 0,32 1168056 1469103804 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgcrypt.so.20.2.4 mysqld 272462 150 mem REG 0,32 158400 1469103784 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/liblzma.so.5.2.4 mysqld 272462 150 mem REG 0,32 35808 1469103846 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/librt-2.28.so mysqld 272462 150 mem REG 0,32 100712 1469103805 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgcc_s.so.1 mysqld 272462 150 mem REG 0,32 1820400 1469103863 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libc-2.28.so mysqld 272462 150 mem REG 0,32 146968 1469103848 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libpthread-2.28.so mysqld 272462 150 mem REG 0,32 1579448 1469103860 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libm-2.28.so mysqld 272462 150 mem REG 0,32 1570256 1469103743 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.25 mysqld 272462 150 mem REG 0,32 14592 1469103861 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libdl-2.28.so mysqld 272462 150 mem REG 0,32 651472 1469103741 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libsystemd.so.0.25.0 mysqld 272462 150 mem REG 0,32 43328 1469103862 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libcrypt-2.28.so mysqld 272462 150 mem REG 0,32 468944 1469103761 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libpcre.so.3.13.3 mysqld 272462 150 mem REG 0,32 117184 1469103724 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libz.so.1.2.11 mysqld 272462 150 mem REG 0,32 14184 1469151726 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libaio.so.1.0.1 mysqld 272462 150 mem REG 0,32 31104 1469152170 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libsnappy.so.1.1.7 mysqld 272462 150 mem REG 0,32 121184 1469103786 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/liblz4.so.1.8.3 mysqld 272462 150 mem REG 0,32 165632 1469103867 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/ld-2.28.so mysqld 272462 150 0r CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null mysqld 272462 150 4uW REG 0,32 52 1469236258 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/aria_log_control mysqld 272462 150 5r DIR 0,32 300 1469161542 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql mysqld 272462 150 6u REG 0,32 16384 1469236295 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/aria_log.00000001 mysqld 272462 150 7u REG 0,32 12582912 1469236310 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/ibdata1 mysqld 272462 150 11u REG 0,32 50331648 1469236311 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/ib_logfile0 mysqld 272462 150 12u REG 0,32 50331648 1469236312 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/ib_logfile1 mysqld 272462 150 13u REG 0,32 12582912 1469245063 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/ibtmp1 mysqld 272462 150 15u REG 0,32 98304 1469236388 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/mysql/innodb_table_stats.ibd mysqld 272462 150 16u REG 0,32 147456 1469236392 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/mysql/transaction_registry.ibd mysqld 272462 150 17u REG 0,32 98304 1469236390 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/mysql/innodb_index_stats.ibd mysqld 272462 150 18u REG 0,32 24576 1469245064 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/tc.log mysqld 272462 150 19u REG 0,32 98304 1469236406 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/mysql/gtid_slave_pos.ibd mysqld 272462 150 42u REG 0,32 0 1469245067 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/var/lib/mysql/multi-master.info logger 272463 root cwd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ logger 272463 root rtd DIR 0,32 460 1469103561 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ logger 272463 root txt REG 0,32 47792 1469105135 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/bin/logger logger 272463 root mem REG 0,32 137424 1469103797 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgpg-error.so.0.26.1 logger 272463 root mem REG 0,32 146968 1469103848 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libpthread-2.28.so logger 272463 root mem REG 0,32 1168056 1469103804 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libgcrypt.so.20.2.4 logger 272463 root mem REG 0,32 121184 1469103786 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/liblz4.so.1.8.3 logger 272463 root mem REG 0,32 158400 1469103784 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/liblzma.so.5.2.4 logger 272463 root mem REG 0,32 35808 1469103846 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/librt-2.28.so logger 272463 root mem REG 0,32 1820400 1469103863 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libc-2.28.so logger 272463 root mem REG 0,32 651472 1469103741 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/libsystemd.so.0.25.0 logger 272463 root mem REG 0,32 165632 1469103867 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/usr/lib/x86_64-linux-gnu/ld-2.28.so logger 272463 root 1w CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null logger 272463 root 2w CHR 1,3 0t0 1469103602 /srv/piuparts.debian.org/../piuparts-workspace//tmp1ju9econ/dev/null 1m41.8s DEBUG: No broken symlinks as far as we can find. 1m41.8s INFO: /bin converted to /usr/bin by /usr merge 1m41.8s INFO: /lib converted to /usr/lib by /usr merge 1m41.8s INFO: /lib/init converted to /usr/lib/init by /usr merge 1m41.8s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 1m41.8s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 1m41.8s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 1m41.8s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 1m41.8s INFO: /lib/systemd/system/mariadb@bootstrap.service.d converted to /usr/lib/systemd/system/mariadb@bootstrap.service.d by /usr merge 1m41.8s INFO: /lib/terminfo converted to /usr/lib/terminfo by /usr merge 1m41.8s INFO: /lib/terminfo/E converted to /usr/lib/terminfo/E by /usr merge 1m41.8s INFO: /lib/terminfo/a converted to /usr/lib/terminfo/a by /usr merge 1m41.8s INFO: /lib/terminfo/c converted to /usr/lib/terminfo/c by /usr merge 1m41.8s INFO: /lib/terminfo/d converted to /usr/lib/terminfo/d by /usr merge 1m41.8s INFO: /lib/terminfo/h converted to /usr/lib/terminfo/h by /usr merge 1m41.8s INFO: /lib/terminfo/l converted to /usr/lib/terminfo/l by /usr merge 1m41.8s INFO: /lib/terminfo/m converted to /usr/lib/terminfo/m by /usr merge 1m41.8s INFO: /lib/terminfo/p converted to /usr/lib/terminfo/p by /usr merge 1m41.8s INFO: /lib/terminfo/r converted to /usr/lib/terminfo/r by /usr merge 1m41.8s INFO: /lib/terminfo/s converted to /usr/lib/terminfo/s by /usr merge 1m41.8s INFO: /lib/terminfo/v converted to /usr/lib/terminfo/v by /usr merge 1m41.8s INFO: /lib/terminfo/w converted to /usr/lib/terminfo/w by /usr merge 1m41.8s INFO: /lib/terminfo/x converted to /usr/lib/terminfo/x by /usr merge 1m41.8s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 1m41.8s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 1m41.8s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 1m41.8s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 1m41.8s INFO: /lib64 converted to /usr/lib64 by /usr merge 1m41.8s INFO: /sbin converted to /usr/sbin by /usr merge 1m43.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', '-ac', '--ignore-obsolete'] 1m46.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', '-ac', '--ignore-obsolete'] 1m46.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m46.9s DUMP: 0.15.6 1m46.9s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m46.9s INFO: Running adequate version 0.15.6 now. 1m46.9s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'stacks-web'] 1m47.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'stacks-web'] 1m47.1s INFO: Running scripts pre_remove 1m47.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m47.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m47.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m47.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m47.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m57.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m57.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m57.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m57.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m57.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m57.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_exceptions'] 1m57.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/pre_remove_exceptions'] 1m57.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m57.9s DUMP: install ok installed adduser adduser 3.118 install ok installed apache2 apache2 2.4.38-3+deb10u8 install ok installed apache2-bin apache2-bin 2.4.38-3+deb10u8 install ok installed apache2-data apache2-data 2.4.38-3+deb10u8 install ok installed apache2-utils apache2-utils 2.4.38-3+deb10u8 install ok installed apt apt 1.8.2.3 install ok installed base-files base-files 10.3+deb10u13 install ok installed base-passwd base-passwd 3.5.46 install ok installed bash bash 5.0-4 install ok installed binutils binutils 2.31.1-16 install ok installed binutils-common:amd64 binutils-common 2.31.1-16 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.31.1-16 install ok installed bsdutils bsdutils 1:2.33.1-0.1 install ok installed bzip2 bzip2 1.0.6-9.2~deb10u1 install ok installed ca-certificates ca-certificates 20200601~deb10u2 install ok installed coreutils coreutils 8.30-3 install ok installed cpp cpp 4:8.3.0-1 install ok installed cpp-8 cpp-8 8.3.0-6 install ok installed cwltool cwltool 1.0.20181217162649+dfsg-10 install ok installed dash dash 0.5.10.2-5 install ok installed debconf debconf 1.5.71+deb10u1 install ok installed debian-archive-keyring debian-archive-keyring 2019.1+deb10u1 install ok installed debianutils debianutils 4.8.6.1 install ok installed default-mysql-server default-mysql-server 1.0.5 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.8 install ok installed e2fsprogs e2fsprogs 1.44.5-1+deb10u3 install ok installed fdisk fdisk 2.33.1-0.1 install ok installed file file 1:5.35-4+deb10u2 install ok installed findutils findutils 4.6.0+git+20190209-2 install ok installed fontconfig-config fontconfig-config 2.13.1-2 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-1 install ok installed fonts-glyphicons-halflings fonts-glyphicons-halflings 1.009~3.4.1+dfsg-1 install ok installed g++ g++ 4:8.3.0-1 install ok installed g++-8 g++-8 8.3.0-6 install ok installed galera-3 galera-3 25.3.25-2 install ok installed gawk gawk 1:4.2.1+dfsg-1 install ok installed gcc gcc 4:8.3.0-1 install ok installed gcc-8 gcc-8 8.3.0-6 install ok installed gcc-8-base:amd64 gcc-8-base 8.3.0-6 install ok installed gdal-data gdal-data 2.4.0+dfsg-1 install ok installed gpgv gpgv 2.2.12-1+deb10u2 install ok installed grep grep 3.3-1 install ok installed gzip gzip 1.9-3+deb10u1 install ok installed hostname hostname 3.21 install ok installed init-system-helpers init-system-helpers 1.56+nmu1 install ok installed iproute2 iproute2 4.20.0-2+deb10u1 install ok installed krb5-locales krb5-locales 1.17-3+deb10u4 install ok installed libacl1:amd64 libacl1 2.2.53-4 install ok installed libaec0:amd64 libaec0 1.0.2-1 install ok installed libaio1:amd64 libaio1 0.3.112-3 install ok installed libapache2-mod-php libapache2-mod-php 2:7.3+69 install ok installed libapache2-mod-php7.3 libapache2-mod-php7.3 7.3.31-1~deb10u1 install ok installed libapr1:amd64 libapr1 1.6.5-1+b1 install ok installed libaprutil1:amd64 libaprutil1 1.6.1-4 install ok installed libaprutil1-dbd-sqlite3:amd64 libaprutil1-dbd-sqlite3 1.6.1-4 install ok installed libaprutil1-ldap:amd64 libaprutil1-ldap 1.6.1-4 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.3 install ok installed libargon2-1:amd64 libargon2-1 0~20171227-0.2 install ok installed libarmadillo9 libarmadillo9 1:9.200.7+dfsg-1 install ok installed libarpack2:amd64 libarpack2 3.7.0-2 install ok installed libasan5:amd64 libasan5 8.3.0-6 install ok installed libatm1:amd64 libatm1 1:2.5.1-2 install ok installed libatomic1:amd64 libatomic1 8.3.0-6 install ok installed libattr1:amd64 libattr1 1:2.4.48-4 install ok installed libaudit-common libaudit-common 1:2.8.4-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.4-3 install ok installed libbinutils:amd64 libbinutils 2.31.1-16 install ok installed libbit-vector-perl libbit-vector-perl 7.4-1+b5 install ok installed libblas3:amd64 libblas3 3.8.0-2 install ok installed libblkid1:amd64 libblkid1 2.33.1-0.1 install ok installed libbrotli1:amd64 libbrotli1 1.0.7-2+deb10u1 install ok installed libbsd0:amd64 libbsd0 0.9.1-2+deb10u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u1 install ok installed libc-ares2:amd64 libc-ares2 1.14.0-1+deb10u1 install ok installed libc-bin libc-bin 2.28-10+deb10u1 install ok installed libc-dev-bin libc-dev-bin 2.28-10+deb10u1 install ok installed libc6:amd64 libc6 2.28-10+deb10u1 install ok installed libc6-dev:amd64 libc6-dev 2.28-10+deb10u1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcap2:amd64 libcap2 1:2.25-2 install ok installed libcap2-bin libcap2-bin 1:2.25-2 install ok installed libcarp-clan-perl libcarp-clan-perl 6.07-1 install ok installed libcc1-0:amd64 libcc1-0 8.3.0-6 install ok installed libcgi-fast-perl libcgi-fast-perl 1:2.13-1 install ok installed libcgi-pm-perl libcgi-pm-perl 4.40-1 install ok installed libcharls2:amd64 libcharls2 2.0.0+dfsg-1 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libconfig-inifiles-perl libconfig-inifiles-perl 3.000001-1 install ok installed libcurl3-gnutls:amd64 libcurl3-gnutls 7.64.0-4+deb10u2 install ok installed libcurl4:amd64 libcurl4 7.64.0-4+deb10u2 install ok installed libdap25:amd64 libdap25 3.20.3-1 install ok installed libdapclient6v5:amd64 libdapclient6v5 3.20.3-1 install ok installed libdapserver7v5:amd64 libdapserver7v5 3.20.3-1 install ok installed libdate-calc-perl libdate-calc-perl 6.4-1 install ok installed libdate-calc-xs-perl libdate-calc-xs-perl 6.4-1+b4 install ok installed libdate-manip-perl libdate-manip-perl 6.76-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdbd-mysql-perl:amd64 libdbd-mysql-perl 4.050-2 install ok installed libdbi-perl:amd64 libdbi-perl 1.642-1+deb10u2 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libdeflate0:amd64 libdeflate0 1.2-1 install ok installed libedit2:amd64 libedit2 3.1-20181209-1 install ok installed libelf1:amd64 libelf1 0.176-1.1 install ok installed libencode-locale-perl libencode-locale-perl 1.05-1 install ok installed libepsilon1:amd64 libepsilon1 0.9.2+dfsg-4 install ok installed libexpat1:amd64 libexpat1 2.2.6-2+deb10u4 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfcgi-perl libfcgi-perl 0.78-2+b3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libfontconfig1:amd64 libfontconfig1 2.13.1-2 install ok installed libfreetype6:amd64 libfreetype6 2.9.1-3+deb10u3 install ok installed libfreexl1:amd64 libfreexl1 1.0.5-3 install ok installed libfyba0:amd64 libfyba0 4.1.1-6 install ok installed libgcc-8-dev:amd64 libgcc-8-dev 8.3.0-6 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5+deb10u1 install ok installed libgdal20 libgdal20 2.4.0+dfsg-1+b1 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.18.1-4 install ok installed libgdbm6:amd64 libgdbm6 1.18.1-4 install ok installed libgeos-3.7.1:amd64 libgeos-3.7.1 3.7.1-1 install ok installed libgeos-c1v5:amd64 libgeos-c1v5 3.7.1-1 install ok installed libgeotiff2:amd64 libgeotiff2 1.4.3-1 install ok installed libgfortran5:amd64 libgfortran5 8.3.0-6 install ok installed libgif7:amd64 libgif7 5.1.4-3 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4+deb10u1 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u8 install ok installed libgomp1:amd64 libgomp1 8.3.0-6 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libgpm2:amd64 libgpm2 1.20.7-5 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.17-3+deb10u4 install ok installed libhdf4-0-alt libhdf4-0-alt 4.2.13-4 install ok installed libhdf5-103:amd64 libhdf5-103 1.10.4+repack-10 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1+deb10u1 install ok installed libhtml-parser-perl libhtml-parser-perl 3.72-3+b3 install ok installed libhtml-tagset-perl libhtml-tagset-perl 3.20-3 install ok installed libhtml-template-perl libhtml-template-perl 2.97-1 install ok installed libhts2:amd64 libhts2 1.9-12~deb10u1 install ok installed libhttp-date-perl libhttp-date-perl 6.02-1 install ok installed libhttp-message-perl libhttp-message-perl 6.18-1 install ok installed libicu63:amd64 libicu63 63.1-6+deb10u3 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed libimagequant0:amd64 libimagequant0 2.12.2-1.1 install ok installed libio-html-perl libio-html-perl 1.001-1 install ok installed libio-stringy-perl libio-stringy-perl 2.111-3 install ok installed libisl19:amd64 libisl19 0.20-2 install ok installed libitm1:amd64 libitm1 8.3.0-6 install ok installed libjansson4:amd64 libjansson4 2.12-1 install ok installed libjbig0:amd64 libjbig0 2.1-3.1+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:1.5.2-2+deb10u1 install ok installed libjs-bootstrap libjs-bootstrap 3.4.1+dfsg-1 install ok installed libjson-c3:amd64 libjson-c3 0.12.1+ds-2+deb10u1 install ok installed libk5crypto3:amd64 libk5crypto3 1.17-3+deb10u4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6-6 install ok installed libkmlbase1:amd64 libkmlbase1 1.3.0-7 install ok installed libkmlconvenience1:amd64 libkmlconvenience1 1.3.0-7 install ok installed libkmldom1:amd64 libkmldom1 1.3.0-7 install ok installed libkmlengine1:amd64 libkmlengine1 1.3.0-7 install ok installed libkmlregionator1:amd64 libkmlregionator1 1.3.0-7 install ok installed libkmlxsd1:amd64 libkmlxsd1 1.3.0-7 install ok installed libkrb5-3:amd64 libkrb5-3 1.17-3+deb10u4 install ok installed libkrb5support0:amd64 libkrb5support0 1.17-3+deb10u4 install ok installed liblapack3:amd64 liblapack3 3.8.0-2 install ok installed liblcms2-2:amd64 liblcms2-2 2.9-3 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.47+dfsg-3+deb10u7 install ok installed libldap-common libldap-common 2.4.47+dfsg-3+deb10u7 install ok installed liblsan0:amd64 liblsan0 8.3.0-6 install ok installed libltdl7:amd64 libltdl7 2.4.6-9 install ok installed liblua5.2-0:amd64 liblua5.2-0 5.2.4-1.1+b2 install ok installed liblwp-mediatypes-perl liblwp-mediatypes-perl 6.02-1 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1+deb10u1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+deb10u1 install ok installed libmagic-mgc libmagic-mgc 1:5.35-4+deb10u2 install ok installed libmagic1:amd64 libmagic1 1:5.35-4+deb10u2 install ok installed libmariadb3:amd64 libmariadb3 1:10.3.34-0+deb10u1 install ok installed libminizip1:amd64 libminizip1 1.1-8+b1 install ok installed libmnl0:amd64 libmnl0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libmpc3:amd64 libmpc3 1.1.0-1 install ok installed libmpdec2:amd64 libmpdec2 2.4.2-2 install ok installed libmpfr6:amd64 libmpfr6 4.0.2-1 install ok installed libmpx2:amd64 libmpx2 8.3.0-6 install ok installed libncurses6:amd64 libncurses6 6.1+20181013-2+deb10u2 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u2 install ok installed libnetcdf13:amd64 libnetcdf13 1:4.6.2-1 install ok installed libnettle6:amd64 libnettle6 3.4.1-1+deb10u1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.36.0-2+deb10u1 install ok installed libnode64:amd64 libnode64 10.24.0~dfsg-1~deb10u1 install ok installed libnspr4:amd64 libnspr4 2:4.20-1 install ok installed libnss3:amd64 libnss3 2:3.42.1-1+deb10u5 install ok installed libodbc1:amd64 libodbc1 2.3.6-0.1 install ok installed libogdi3.2 libogdi3.2 3.2.1+ds-4 install ok installed libole-storage-lite-perl libole-storage-lite-perl 0.19-2+deb10u1 install ok installed libopenjp2-7:amd64 libopenjp2-7 2.3.0-2+deb10u2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2+deb10u1 install ok installed libpam-cap:amd64 libpam-cap 1:2.25-2 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libparse-recdescent-perl libparse-recdescent-perl 1.967015+dfsg-2 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.32-5 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libperl5.28:amd64 libperl5.28 5.28.1-6+deb10u1 install ok installed libpng16-16:amd64 libpng16-16 1.6.36-6 install ok installed libpoppler82:amd64 libpoppler82 0.71.0-5 install ok installed libpopt0:amd64 libpopt0 1.16-12 install ok installed libpq5:amd64 libpq5 11.16-0+deb10u1 install ok installed libprocps7:amd64 libprocps7 2:3.3.15-2 install ok installed libproj13:amd64 libproj13 5.2.0-1 install ok installed libpsl5:amd64 libpsl5 0.20.2-2 install ok installed libpython-stdlib:amd64 libpython-stdlib 2.7.16-1 install ok installed libpython2-stdlib:amd64 libpython2-stdlib 2.7.16-1 install ok installed libpython2.7-minimal:amd64 libpython2.7-minimal 2.7.16-2+deb10u1 install ok installed libpython2.7-stdlib:amd64 libpython2.7-stdlib 2.7.16-2+deb10u1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.7.3-1 install ok installed libpython3.7-minimal:amd64 libpython3.7-minimal 3.7.3-2+deb10u3 install ok installed libpython3.7-stdlib:amd64 libpython3.7-stdlib 3.7.3-2+deb10u3 install ok installed libqhull7:amd64 libqhull7 2015.2-4 install ok installed libquadmath0:amd64 libquadmath0 8.3.0-6 install ok installed libreadline5:amd64 libreadline5 5.2+dfsg-3+b13 install ok installed libreadline7:amd64 libreadline7 7.0-5 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.27+dfsg-1+deb10u2 install ok installed libsasl2-modules:amd64 libsasl2-modules 2.1.27+dfsg-1+deb10u2 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.27+dfsg-1+deb10u2 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsigsegv2:amd64 libsigsegv2 2.12-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libsnappy1v5:amd64 libsnappy1v5 1.1.7-1 install ok installed libsodium23:amd64 libsodium23 1.0.17-1 install ok installed libspatialite7:amd64 libspatialite7 4.3.0a-5+b2 install ok installed libspreadsheet-writeexcel-perl libspreadsheet-writeexcel-perl 2.40-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.27.2-3+deb10u1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libssh2-1:amd64 libssh2-1 1.8.0-2.1 install ok installed libssl1.1:amd64 libssl1.1 1.1.1n-0+deb10u3 install ok installed libstdc++-8-dev:amd64 libstdc++-8-dev 8.3.0-6 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsuperlu5:amd64 libsuperlu5 5.2.1+dfsg1-4 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u8 install ok installed libsz2:amd64 libsz2 1.0.2-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3 install ok installed libterm-readkey-perl libterm-readkey-perl 2.38-1 install ok installed libtiff5:amd64 libtiff5 4.1.0+git191117-2~deb10u4 install ok installed libtimedate-perl libtimedate-perl 2.3000-2+deb10u1 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u2 install ok installed libtsan0:amd64 libtsan0 8.3.0-6 install ok installed libubsan1:amd64 libubsan1 8.3.0-6 install ok installed libudev1:amd64 libudev1 241-7~deb10u8 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed liburi-perl liburi-perl 1.76-1 install ok installed liburiparser1:amd64 liburiparser1 0.9.1-1+deb10u1 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libuv1:amd64 libuv1 1.24.1-1+deb10u1 install ok installed libwebp6:amd64 libwebp6 0.6.1-2+deb10u1 install ok installed libwebpdemux2:amd64 libwebpdemux2 0.6.1-2+deb10u1 install ok installed libwebpmux3:amd64 libwebpmux3 0.6.1-2+deb10u1 install ok installed libwrap0:amd64 libwrap0 7.6.q-28 install ok installed libxerces-c3.2:amd64 libxerces-c3.2 3.2.2+debian-1+deb10u1 install ok installed libxml2:amd64 libxml2 2.9.4+dfsg1-7+deb10u4 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.32-2.2~deb10u1 install ok installed libxtables12:amd64 libxtables12 1.8.2-4 install ok installed libyaml-0-2:amd64 libyaml-0-2 0.2.1-1 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3+deb10u2 install ok installed linux-libc-dev:amd64 linux-libc-dev 4.19.249-2 install ok installed login login 1:4.5-1.1 install ok installed lsb-base lsb-base 10.2019051400 install ok installed lsof lsof 4.91+dfsg-1 install ok installed manpages manpages 4.16-2 install ok installed manpages-dev manpages-dev 4.16-2 install ok installed mariadb-client-10.3 mariadb-client-10.3 1:10.3.34-0+deb10u1 install ok installed mariadb-client-core-10.3 mariadb-client-core-10.3 1:10.3.34-0+deb10u1 install ok installed mariadb-common mariadb-common 1:10.3.34-0+deb10u1 install ok installed mariadb-server-10.3 mariadb-server-10.3 1:10.3.34-0+deb10u1 install ok installed mariadb-server-core-10.3 mariadb-server-core-10.3 1:10.3.34-0+deb10u1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mime-support mime-support 3.62 install ok installed mount mount 2.33.1-0.1 install ok installed mysql-common mysql-common 5.8+1.0.5 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u2 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u2 install ok installed netbase netbase 5.6 install ok installed nodejs nodejs 10.24.0~dfsg-1~deb10u1 install ok installed nodejs-doc nodejs-doc 10.24.0~dfsg-1~deb10u1 install ok installed odbcinst odbcinst 2.3.6-0.1 install ok installed odbcinst1debian2:amd64 odbcinst1debian2 2.3.6-0.1 install ok installed openssl openssl 1.1.1n-0+deb10u3 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl perl 5.28.1-6+deb10u1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed perl-modules-5.28 perl-modules-5.28 5.28.1-6+deb10u1 install ok installed php-common php-common 2:69 install ok installed php-mdb2 php-mdb2 2.5.0b5-2 install ok installed php-mdb2-driver-mysql php-mdb2-driver-mysql 1.5.0b4-2 install ok installed php-mysql php-mysql 2:7.3+69 install ok installed php-pear php-pear 1:1.10.6+submodules+notgz-1.1+deb10u2 install ok installed php-xml php-xml 2:7.3+69 install ok installed php7.3-cli php7.3-cli 7.3.31-1~deb10u1 install ok installed php7.3-common php7.3-common 7.3.31-1~deb10u1 install ok installed php7.3-json php7.3-json 7.3.31-1~deb10u1 install ok installed php7.3-mysql php7.3-mysql 7.3.31-1~deb10u1 install ok installed php7.3-opcache php7.3-opcache 7.3.31-1~deb10u1 install ok installed php7.3-readline php7.3-readline 7.3.31-1~deb10u1 install ok installed php7.3-xml php7.3-xml 7.3.31-1~deb10u1 install ok installed poppler-data poppler-data 0.4.9-2 install ok installed procps procps 2:3.3.15-2 install ok installed proj-bin proj-bin 5.2.0-1 install ok installed proj-data proj-data 5.2.0-1 install ok installed psmisc psmisc 23.2-1+deb10u1 install ok installed publicsuffix publicsuffix 20220811.1734-0+deb10u1 install ok installed python python 2.7.16-1 install ok installed python-minimal python-minimal 2.7.16-1 install ok installed python2 python2 2.7.16-1 install ok installed python2-minimal python2-minimal 2.7.16-1 install ok installed python2.7 python2.7 2.7.16-2+deb10u1 install ok installed python2.7-minimal python2.7-minimal 2.7.16-2+deb10u1 install ok installed python3 python3 3.7.3-1 install ok installed python3-bs4 python3-bs4 4.7.1-1 install ok installed python3-cachecontrol python3-cachecontrol 0.11.7-1 install ok installed python3-certifi python3-certifi 2018.8.24-1 install ok installed python3-chardet python3-chardet 3.0.4-3 install ok installed python3-dateutil python3-dateutil 2.7.3-3 install ok installed python3-decorator python3-decorator 4.3.0-1.1 install ok installed python3-distutils python3-distutils 3.7.3-1 install ok installed python3-gdal python3-gdal 2.4.0+dfsg-1+b1 install ok installed python3-html5lib python3-html5lib 1.0.1-1 install ok installed python3-idna python3-idna 2.6-1 install ok installed python3-isodate python3-isodate 0.6.0-1 install ok installed python3-lib2to3 python3-lib2to3 3.7.3-1 install ok installed python3-lockfile python3-lockfile 1:0.12.2-2 install ok installed python3-lxml:amd64 python3-lxml 4.3.2-1+deb10u4 install ok installed python3-minimal python3-minimal 3.7.3-1 install ok installed python3-mistune python3-mistune 0.8.4-1 install ok installed python3-mypy python3-mypy 0.670-2 install ok installed python3-mypy-extensions python3-mypy-extensions 0.4.1-1 install ok installed python3-networkx python3-networkx 2.2-1 install ok installed python3-numpy python3-numpy 1:1.16.2-1 install ok installed python3-olefile python3-olefile 0.46-1 install ok installed python3-pil:amd64 python3-pil 5.4.1-2+deb10u3 install ok installed python3-pkg-resources python3-pkg-resources 40.8.0-1 install ok installed python3-prov python3-prov 1.5.2-1 install ok installed python3-psutil python3-psutil 5.5.1-1 install ok installed python3-pyparsing python3-pyparsing 2.2.0+dfsg1-2 install ok installed python3-rdflib python3-rdflib 4.2.2-2 install ok installed python3-rdflib-jsonld python3-rdflib-jsonld 0.4.0-4 install ok installed python3-requests python3-requests 2.21.0-1 install ok installed python3-ruamel.yaml python3-ruamel.yaml 0.15.34-1+b1 install ok installed python3-schema-salad python3-schema-salad 3.0.20181206233650-2 install ok installed python3-scipy python3-scipy 1.1.0-7 install ok installed python3-shellescape python3-shellescape 3.4.1-3 install ok installed python3-six python3-six 1.12.0-1 install ok installed python3-soupsieve python3-soupsieve 1.8+dfsg-1 install ok installed python3-sparqlwrapper python3-sparqlwrapper 1.8.2-0.1 install ok installed python3-typed-ast python3-typed-ast 1.3.1-1 install ok installed python3-typing-extensions python3-typing-extensions 3.7.2-1 install ok installed python3-urllib3 python3-urllib3 1.24.1-1 install ok installed python3-webencodings python3-webencodings 0.5.1-1 install ok installed python3-yaml python3-yaml 3.13-2 install ok installed python3.7 python3.7 3.7.3-2+deb10u3 install ok installed python3.7-minimal python3.7-minimal 3.7.3-2+deb10u3 install ok installed readline-common readline-common 7.0-5 install ok installed rsync rsync 3.1.3-6 install ok installed samtools samtools 1.9-4 install ok installed sed sed 4.7-1 install ok installed sensible-utils sensible-utils 0.0.12 install ok installed socat socat 1.7.3.2-2 install ok installed ssl-cert ssl-cert 1.0.39 install ok installed stacks stacks 2.2+dfsg-1 install ok installed stacks-web stacks-web 2.2+dfsg-1 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed tzdata tzdata 2021a-0+deb10u6 install ok installed ucf ucf 3.0038+nmu1 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed xz-utils xz-utils 5.2.4-1+deb10u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1+deb10u1 1m57.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m57.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', 'remove', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bzip2', 'ca-certificates', 'cpp', 'cpp-8', 'cwltool', 'default-mysql-server', 'file', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-glyphicons-halflings', 'g++-', 'g++-8', 'galera-3', 'gawk', 'gcc', 'gcc-8', 'gdal-data', 'iproute2', 'krb5-locales', 'libaec0:amd64', 'libaio1:amd64', 'libapache2-mod-php', 'libapache2-mod-php7.3', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libargon2-1:amd64', 'libarmadillo9', 'libarpack2:amd64', 'libasan5:amd64', 'libatm1:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libbit-vector-perl', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-ares2:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcap2:amd64', 'libcap2-bin', 'libcarp-clan-perl', 'libcc1-0:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcharls2:amd64', 'libconfig-inifiles-perl', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdap25:amd64', 'libdapclient6v5:amd64', 'libdapserver7v5:amd64', 'libdate-calc-perl', 'libdate-calc-xs-perl', 'libdate-manip-perl', 'libdbd-mysql-perl:amd64', 'libdbi-perl:amd64', 'libdeflate0:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libencode-locale-perl', 'libepsilon1:amd64', 'libexpat1:amd64', 'libfcgi-perl', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfyba0:amd64', 'libgcc-8-dev:amd64', 'libgdal20', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgeos-3.7.1:amd64', 'libgeos-c1v5:amd64', 'libgeotiff2:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgssapi-krb5-2:amd64', 'libhdf4-0-alt', 'libhdf5-103:amd64', 'libhtml-parser-perl', 'libhtml-tagset-perl', 'libhtml-template-perl', 'libhts2:amd64', 'libhttp-date-perl', 'libhttp-message-perl', 'libicu63:amd64', 'libimagequant0:amd64', 'libio-html-perl', 'libio-stringy-perl', 'libisl19:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootstrap', 'libjson-c3:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1:amd64', 'libkmlconvenience1:amd64', 'libkmldom1:amd64', 'libkmlengine1:amd64', 'libkmlregionator1:amd64', 'libkmlxsd1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.2-0:amd64', 'liblwp-mediatypes-perl', 'libmagic-mgc', 'libmagic1:amd64', 'libmariadb3:amd64', 'libminizip1:amd64', 'libmnl0:amd64', 'libmpc3:amd64', 'libmpdec2:amd64', 'libmpfr6:amd64', 'libmpx2:amd64', 'libncurses6:amd64', 'libnetcdf13:amd64', 'libnghttp2-14:amd64', 'libnode64:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libodbc1:amd64', 'libogdi3.2', 'libole-storage-lite-perl', 'libopenjp2-7:amd64', 'libpam-cap:amd64', 'libparse-recdescent-perl', 'libpcre2-8-0:amd64', 'libperl5.28:amd64', 'libpng16-16:amd64', 'libpoppler82:amd64', 'libpopt0:amd64', 'libpq5:amd64', 'libprocps7:amd64', 'libproj13:amd64', 'libpsl5:amd64', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libpython3-stdlib:amd64', 'libpython3.7-minimal:amd64', 'libpython3.7-stdlib:amd64', 'libqhull7:amd64', 'libquadmath0:amd64', 'libreadline5:amd64', 'libreadline7:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsigsegv2:amd64', 'libsnappy1v5:amd64', 'libsodium23:amd64', 'libspatialite7:amd64', 'libspreadsheet-writeexcel-perl', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libstdc++-8-dev:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libterm-readkey-perl', 'libtiff5:amd64', 'libtimedate-perl', 'libtsan0:amd64', 'libubsan1:amd64', 'liburi-perl', 'liburiparser1:amd64', 'libuv1:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwrap0:amd64', 'libxerces-c3.2:amd64', 'libxml2:amd64', 'libxslt1.1:amd64', 'libxtables12:amd64', 'libyaml-0-2:amd64', 'linux-libc-dev:amd64', 'lsb-base', 'lsof', 'manpages', 'manpages-dev', 'mariadb-client-10.3', 'mariadb-client-core-10.3', 'mariadb-common', 'mariadb-server-10.3', 'mariadb-server-core-10.3', 'mime-support', 'mysql-common', 'netbase', 'nodejs', 'nodejs-doc', 'odbcinst', 'odbcinst1debian2:amd64', 'openssl', 'perl', 'perl-modules-5.28', 'php-common', 'php-mdb2', 'php-mdb2-driver-mysql', 'php-mysql', 'php-pear', 'php-xml', 'php7.3-cli', 'php7.3-common', 'php7.3-json', 'php7.3-mysql', 'php7.3-opcache', 'php7.3-readline', 'php7.3-xml', 'poppler-data', 'procps', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python', 'python-minimal', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'python3', 'python3-bs4', 'python3-cachecontrol', 'python3-certifi', 'python3-chardet', 'python3-dateutil', 'python3-decorator', 'python3-distutils', 'python3-gdal', 'python3-html5lib', 'python3-idna', 'python3-isodate', 'python3-lib2to3', 'python3-lockfile', 'python3-lxml:amd64', 'python3-minimal', 'python3-mistune', 'python3-mypy', 'python3-mypy-extensions', 'python3-networkx', 'python3-numpy', 'python3-olefile', 'python3-pil:amd64', 'python3-pkg-resources', 'python3-prov', 'python3-psutil', 'python3-pyparsing', 'python3-rdflib', 'python3-rdflib-jsonld', 'python3-requests', 'python3-ruamel.yaml', 'python3-schema-salad', 'python3-scipy', 'python3-shellescape', 'python3-six', 'python3-soupsieve', 'python3-sparqlwrapper', 'python3-typed-ast', 'python3-typing-extensions', 'python3-urllib3', 'python3-webencodings', 'python3-yaml', 'python3.7', 'python3.7-minimal', 'readline-common', 'rsync', 'samtools', 'sensible-utils', 'socat', 'ssl-cert', 'stacks', 'ucf', 'xz-utils', 'stacks-web'] 2m15.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: apache2 apache2-bin apache2-data apache2-utils binutils binutils-common binutils-x86-64-linux-gnu bzip2 ca-certificates cpp cpp-8 cwltool default-mysql-server file fontconfig-config fonts-dejavu-core fonts-glyphicons-halflings g++ g++-8 galera-3 gawk gcc gcc-8 gdal-data iproute2 krb5-locales libaec0 libaio1 libapache2-mod-php libapache2-mod-php7.3 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libargon2-1 libarmadillo9 libarpack2 libasan5 libatm1 libatomic1 libbinutils libbit-vector-perl libblas3 libbrotli1 libbsd0 libc-ares2 libc-dev-bin libc6-dev libcap2 libcap2-bin libcarp-clan-perl libcc1-0 libcgi-fast-perl libcgi-pm-perl libcharls2 libconfig-inifiles-perl libcurl3-gnutls libcurl4 libdap25 libdapclient6v5 libdapserver7v5 libdate-calc-perl libdate-calc-xs-perl libdate-manip-perl libdbd-mysql-perl libdbi-perl libdeflate0 libedit2 libelf1 libencode-locale-perl libepsilon1 libexpat1 libfcgi-perl libfontconfig1 libfreetype6 libfreexl1 libfyba0 libgcc-8-dev libgdal20 libgdbm-compat4 libgdbm6 libgeos-3.7.1 libgeos-c1v5 libgeotiff2 libgfortran5 libgif7 libgomp1 libgpm2 libgssapi-krb5-2 libhdf4-0-alt libhdf5-103 libhtml-parser-perl libhtml-tagset-perl libhtml-template-perl libhts2 libhttp-date-perl libhttp-message-perl libicu63 libimagequant0 libio-html-perl libio-stringy-perl libisl19 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-bootstrap libjson-c3 libk5crypto3 libkeyutils1 libkmlbase1 libkmlconvenience1 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common liblsan0 libltdl7 liblua5.2-0 liblwp-mediatypes-perl libmagic-mgc libmagic1 libmariadb3 libminizip1 libmnl0 libmpc3 libmpdec2 libmpfr6 libmpx2 libncurses6 libnetcdf13 libnghttp2-14 libnode64 libnspr4 libnss3 libodbc1 libogdi3.2 libole-storage-lite-perl libopenjp2-7 libpam-cap libparse-recdescent-perl libpcre2-8-0 libperl5.28 libpng16-16 libpoppler82 libpopt0 libpq5 libprocps7 libproj13 libpsl5 libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libqhull7 libquadmath0 libreadline5 libreadline7 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libsigsegv2 libsnappy1v5 libsodium23 libspatialite7 libspreadsheet-writeexcel-perl libsqlite3-0 libssh2-1 libssl1.1 libstdc++-8-dev libsuperlu5 libsz2 libterm-readkey-perl libtiff5 libtimedate-perl libtsan0 libubsan1 liburi-perl liburiparser1 libuv1 libwebp6 libwebpdemux2 libwebpmux3 libwrap0 libxerces-c3.2 libxml2 libxslt1.1 libxtables12 libyaml-0-2 linux-libc-dev lsb-base lsof manpages manpages-dev mariadb-client-10.3 mariadb-client-core-10.3 mariadb-common mariadb-server-10.3 mariadb-server-core-10.3 mime-support mysql-common netbase nodejs nodejs-doc odbcinst odbcinst1debian2 openssl perl perl-modules-5.28 php-common php-mdb2 php-mdb2-driver-mysql php-mysql php-pear php-xml php7.3-cli php7.3-common php7.3-json php7.3-mysql php7.3-opcache php7.3-readline php7.3-xml poppler-data procps proj-bin proj-data psmisc publicsuffix python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-bs4 python3-cachecontrol python3-certifi python3-chardet python3-dateutil python3-decorator python3-distutils python3-gdal python3-html5lib python3-idna python3-isodate python3-lib2to3 python3-lockfile python3-lxml python3-minimal python3-mistune python3-mypy python3-mypy-extensions python3-networkx python3-numpy python3-olefile python3-pil python3-pkg-resources python3-prov python3-psutil python3-pyparsing python3-rdflib python3-rdflib-jsonld python3-requests python3-ruamel.yaml python3-schema-salad python3-scipy python3-shellescape python3-six python3-soupsieve python3-sparqlwrapper python3-typed-ast python3-typing-extensions python3-urllib3 python3-webencodings python3-yaml python3.7 python3.7-minimal readline-common rsync samtools sensible-utils socat ssl-cert stacks stacks-web ucf xz-utils 0 upgraded, 0 newly installed, 298 to remove and 0 not upgraded. After this operation, 795 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27551 files and directories currently installed.) Removing stacks-web (2.2+dfsg-1) ... Conf stacks-web disabled. apache2_invoke prerm: Disable configuration stacks-web invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of reload. Removing apache2 (2.4.38-3+deb10u8) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libapache2-mod-php (2:7.3+69) ... Removing libapache2-mod-php7.3 (7.3.31-1~deb10u1) ... Removing apache2-bin (2.4.38-3+deb10u8) ... dpkg: warning: while removing apache2-bin, directory '/var/lib/apache2' not empty so not removed Removing apache2-data (2.4.38-3+deb10u8) ... Removing apache2-utils (2.4.38-3+deb10u8) ... Removing g++ (4:8.3.0-1) ... Removing gcc (4:8.3.0-1) ... Removing bzip2 (1.0.6-9.2~deb10u1) ... Removing cwltool (1.0.20181217162649+dfsg-10) ... Removing python3-schema-salad (3.0.20181206233650-2) ... Removing python3-cachecontrol (0.11.7-1) ... Removing python3-requests (2.21.0-1) ... Removing python3-certifi (2018.8.24-1) ... Removing ca-certificates (20200601~deb10u2) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing cpp (4:8.3.0-1) ... Removing default-mysql-server (1.0.5) ... Removing file (1:5.35-4+deb10u2) ... Removing python3-gdal (2.4.0+dfsg-1+b1) ... Removing libgdal20 (2.4.0+dfsg-1+b1) ... Removing libpoppler82:amd64 (0.71.0-5) ... Removing libfontconfig1:amd64 (2.13.1-2) ... Removing fontconfig-config (2.13.1-2) ... Removing fonts-dejavu-core (2.37-1) ... Removing libjs-bootstrap (3.4.1+dfsg-1) ... Removing fonts-glyphicons-halflings (1.009~3.4.1+dfsg-1) ... Removing g++-8 (8.3.0-6) ... Removing mariadb-server-10.3 (1:10.3.34-0+deb10u1) ... invoke-rc.d: could not determine current runlevel [....] Stopping MariaDB database server: mysqld[ESC][?25l[ESC]7[ESC][1G[[ESC][32m ok [ESC][39;49m[ESC]8[ESC][34h[ESC][?25h. Removing galera-3 (25.3.25-2) ... Removing gawk (1:4.2.1+dfsg-1) ... update-alternatives: using /usr/bin/mawk to provide /usr/bin/awk (awk) in auto mode Removing gdal-data (2.4.0+dfsg-1) ... Removing iproute2 (4.20.0-2+deb10u1) ... Removing krb5-locales (1.17-3+deb10u4) ... Removing libnetcdf13:amd64 (1:4.6.2-1) ... Removing libhdf5-103:amd64 (1.10.4+repack-10) ... Removing libsz2:amd64 (1.0.2-1) ... Removing libaec0:amd64 (1.0.2-1) ... Removing mariadb-server-core-10.3 (1:10.3.34-0+deb10u1) ... Removing mariadb-client-10.3 (1:10.3.34-0+deb10u1) ... Removing mariadb-client-core-10.3 (1:10.3.34-0+deb10u1) ... Removing libaio1:amd64 (0.3.112-3) ... Removing libaprutil1-ldap:amd64 (1.6.1-4) ... Removing libaprutil1-dbd-sqlite3:amd64 (1.6.1-4) ... Removing libaprutil1:amd64 (1.6.1-4) ... Removing libapr1:amd64 (1.6.5-1+b1) ... Removing php-mdb2-driver-mysql (1.5.0b4-2) ... Removing php-mdb2 (2.5.0b5-2) ... Removing php-pear (1:1.10.6+submodules+notgz-1.1+deb10u2) ... Removing php7.3-cli (7.3.31-1~deb10u1) ... Removing libargon2-1:amd64 (0~20171227-0.2) ... Removing libarmadillo9 (1:9.200.7+dfsg-1) ... Removing libarpack2:amd64 (3.7.0-2) ... Removing libstdc++-8-dev:amd64 (8.3.0-6) ... Removing libatm1:amd64 (1:2.5.1-2) ... Removing nodejs (10.24.0~dfsg-1~deb10u1) ... Removing libnode64:amd64 (10.24.0~dfsg-1~deb10u1) ... Removing libdate-calc-xs-perl (6.4-1+b4) ... Removing libdate-calc-perl (6.4-1) ... Removing libbit-vector-perl (7.4-1+b5) ... Removing libsuperlu5:amd64 (5.2.1+dfsg1-4) ... Removing python3-scipy (1.1.0-7) ... Removing python3-numpy (1:1.16.2-1) ... Removing liblapack3:amd64 (3.8.0-2) ... Removing libblas3:amd64 (3.8.0-2) ... Removing libbrotli1:amd64 (1.0.7-2+deb10u1) ... Removing php7.3-readline (7.3.31-1~deb10u1) ... Removing libedit2:amd64 (3.1-20181209-1) ... Removing libbsd0:amd64 (0.9.1-2+deb10u1) ... Removing libc-ares2:amd64 (1.14.0-1+deb10u1) ... Removing libc6-dev:amd64 (2.28-10+deb10u1) ... Removing libc-dev-bin (2.28-10+deb10u1) ... Removing libpam-cap:amd64 (1:2.25-2) ... Removing libcap2-bin (1:2.25-2) ... Removing libcap2:amd64 (1:2.25-2) ... Removing libcarp-clan-perl (6.07-1) ... Removing libcgi-fast-perl (1:2.13-1) ... Removing libhtml-template-perl (2.97-1) ... Removing libcgi-pm-perl (4.40-1) ... Removing libcharls2:amd64 (2.0.0+dfsg-1) ... Removing libconfig-inifiles-perl (3.000001-1) ... Removing libxerces-c3.2:amd64 (3.2.2+debian-1+deb10u1) ... Removing libdapclient6v5:amd64 (3.20.3-1) ... Removing libcurl4:amd64 (7.64.0-4+deb10u2) ... Removing libdapserver7v5:amd64 (3.20.3-1) ... Removing libdap25:amd64 (3.20.3-1) ... Removing libdate-manip-perl (6.76-1) ... Removing libdbd-mysql-perl:amd64 (4.050-2) ... Removing stacks (2.2+dfsg-1) ... Removing libdbi-perl:amd64 (1.642-1+deb10u2) ... Removing samtools (1.9-4) ... Removing libhts2:amd64 (1.9-12~deb10u1) ... Removing libdeflate0:amd64 (1.2-1) ... Removing libelf1:amd64 (0.176-1.1) ... Removing libhttp-message-perl (6.18-1) ... Removing libencode-locale-perl (1.05-1) ... Removing libepsilon1:amd64 (0.9.2+dfsg-4) ... Removing python3-mypy (0.670-2) ... Removing python3-distutils (3.7.3-1) ... Removing python3-sparqlwrapper (1.8.2-0.1) ... Removing python3-ruamel.yaml (0.15.34-1+b1) ... Removing python3-bs4 (4.7.1-1) ... Removing python3-soupsieve (1.8+dfsg-1) ... Removing python (2.7.16-1) ... Removing libfcgi-perl (0.78-2+b3) ... Removing python3-pil:amd64 (5.4.1-2+deb10u3) ... Removing libfreetype6:amd64 (2.9.1-3+deb10u3) ... Removing libspatialite7:amd64 (4.3.0a-5+b2) ... Removing libfreexl1:amd64 (1.0.5-3) ... Removing libfyba0:amd64 (4.1.1-6) ... Removing libhttp-date-perl (6.02-1) ... Removing libtimedate-perl (2.3000-2+deb10u1) ... Removing libhtml-parser-perl (3.72-3+b3) ... Removing liburi-perl (1.76-1) ... Removing libterm-readkey-perl (2.38-1) ... Removing libgeos-c1v5:amd64 (3.7.1-1) ... Removing libgeos-3.7.1:amd64 (3.7.1-1) ... Removing libgeotiff2:amd64 (1.4.3-1) ... Removing libgfortran5:amd64 (8.3.0-6) ... Removing libgif7:amd64 (5.1.4-3) ... Removing libgpm2:amd64 (1.20.7-5) ... Removing libpq5:amd64 (11.16-0+deb10u1) ... Removing libhdf4-0-alt (4.2.13-4) ... Removing libhtml-tagset-perl (3.20-3) ... Removing php-xml (2:7.3+69) ... Removing php7.3-xml (7.3.31-1~deb10u1) ... Removing python3-prov (1.5.2-1) ... Removing python3-lxml:amd64 (4.3.2-1+deb10u4) ... Removing libimagequant0:amd64 (2.12.2-1.1) ... Removing libio-html-perl (1.001-1) ... Removing libole-storage-lite-perl (0.19-2+deb10u1) ... Removing libio-stringy-perl (2.111-3) ... Removing libjansson4:amd64 (2.12-1) ... Removing libtiff5:amd64 (4.1.0+git191117-2~deb10u4) ... Removing libjbig0:amd64 (2.1-3.1+b2) ... Removing libjpeg62-turbo:amd64 (1:1.5.2-2+deb10u1) ... Removing libjson-c3:amd64 (0.12.1+ds-2+deb10u1) ... Removing libkmlxsd1:amd64 (1.3.0-7) ... Removing libkmlregionator1:amd64 (1.3.0-7) ... Removing libkmlconvenience1:amd64 (1.3.0-7) ... Removing libkmlengine1:amd64 (1.3.0-7) ... Removing libkmldom1:amd64 (1.3.0-7) ... Removing liblcms2-2:amd64 (2.9-3) ... Removing libodbc1:amd64 (2.3.6-0.1) ... Removing liblua5.2-0:amd64 (5.2.4-1.1+b2) ... Removing liblwp-mediatypes-perl (6.02-1) ... Removing libmagic1:amd64 (1:5.35-4+deb10u2) ... Removing libmagic-mgc (1:5.35-4+deb10u2) ... Removing libmariadb3:amd64 (1:10.3.34-0+deb10u1) ... Removing libmnl0:amd64 (1.0.4-2) ... Removing procps (2:3.3.15-2) ... Removing libncurses6:amd64 (6.1+20181013-2+deb10u2) ... Removing libnss3:amd64 (2:3.42.1-1+deb10u5) ... Removing libnspr4:amd64 (2:4.20-1) ... Removing libogdi3.2 (3.2.1+ds-4) ... Removing libopenjp2-7:amd64 (2.3.0-2+deb10u2) ... Removing libspreadsheet-writeexcel-perl (2.40-1) ... Removing libparse-recdescent-perl (1.967015+dfsg-2) ... Removing libpcre2-8-0:amd64 (10.32-5) ... Removing libpng16-16:amd64 (1.6.36-6) ... Removing rsync (3.1.3-6) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libpopt0:amd64 (1.16-12) ... Removing libprocps7:amd64 (2:3.3.15-2) ... Removing proj-bin (5.2.0-1) ... Removing libproj13:amd64 (5.2.0-1) ... Removing libpython-stdlib:amd64 (2.7.16-1) ... Removing python2 (2.7.16-1) ... Removing libpython2-stdlib:amd64 (2.7.16-1) ... Removing python-minimal (2.7.16-1) ... Removing libqhull7:amd64 (2015.2-4) ... Removing libreadline5:amd64 (5.2+dfsg-3+b13) ... Removing libsasl2-modules:amd64 (2.1.27+dfsg-1+deb10u2) ... Removing libsigsegv2:amd64 (2.12-2) ... Removing libsnappy1v5:amd64 (1.1.7-1) ... Removing libsodium23:amd64 (1.0.17-1) ... Removing socat (1.7.3.2-2) ... Removing php7.3-opcache (7.3.31-1~deb10u1) ... Removing libuv1:amd64 (1.24.1-1+deb10u1) ... Removing libwebpmux3:amd64 (0.6.1-2+deb10u1) ... Removing libwebpdemux2:amd64 (0.6.1-2+deb10u1) ... Removing libwebp6:amd64 (0.6.1-2+deb10u1) ... Removing libwrap0:amd64 (7.6.q-28) ... Removing libxslt1.1:amd64 (1.1.32-2.2~deb10u1) ... Removing libxtables12:amd64 (1.8.2-4) ... Removing python3-yaml (3.13-2) ... Removing libyaml-0-2:amd64 (0.2.1-1) ... Removing linux-libc-dev:amd64 (4.19.249-2) ... Removing lsb-base (10.2019051400) ... Removing lsof (4.91+dfsg-1) ... Removing manpages-dev (4.16-2) ... Removing manpages (4.16-2) ... Removing mariadb-common (1:10.3.34-0+deb10u1) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Removing mysql-common (5.8+1.0.5) ... Removing netbase (5.6) ... Removing nodejs-doc (10.24.0~dfsg-1~deb10u1) ... Removing ssl-cert (1.0.39) ... Removing openssl (1.1.1n-0+deb10u3) ... Removing php-mysql (2:7.3+69) ... Removing php7.3-mysql (7.3.31-1~deb10u1) ... Removing php7.3-json (7.3.31-1~deb10u1) ... Removing poppler-data (0.4.9-2) ... Removing proj-data (5.2.0-1) ... Removing publicsuffix (20220811.1734-0+deb10u1) ... Removing python2-minimal (2.7.16-1) ... Removing python3-chardet (3.0.4-3) ... Removing python3-dateutil (2.7.3-3) ... Removing python3-networkx (2.2-1) ... Removing python3-decorator (4.3.0-1.1) ... Removing python3-html5lib (1.0.1-1) ... Removing python3-idna (2.6-1) ... Removing python3-rdflib-jsonld (0.4.0-4) ... Removing python3-rdflib (4.2.2-2) ... Removing python3-isodate (0.6.0-1) ... Removing python3-lib2to3 (3.7.3-1) ... Removing python3-lockfile (1:0.12.2-2) ... Removing python3-mistune (0.8.4-1) ... Removing python3-mypy-extensions (0.4.1-1) ... Removing python3-olefile (0.46-1) ... Removing python3-pkg-resources (40.8.0-1) ... Removing python3-psutil (5.5.1-1) ... Removing python3-pyparsing (2.2.0+dfsg1-2) ... Removing python3-shellescape (3.4.1-3) ... Removing python3-urllib3 (1.24.1-1) ... Removing python3-six (1.12.0-1) ... Removing python3-typed-ast (1.3.1-1) ... Removing python3-typing-extensions (3.7.2-1) ... Removing python3-webencodings (0.5.1-1) ... Removing xz-utils (5.2.4-1+deb10u1) ... Removing gcc-8 (8.3.0-6) ... Removing binutils (2.31.1-16) ... Removing binutils-x86-64-linux-gnu (2.31.1-16) ... Removing libbinutils:amd64 (2.31.1-16) ... Removing binutils-common:amd64 (2.31.1-16) ... Removing cpp-8 (8.3.0-6) ... Removing libgcc-8-dev:amd64 (8.3.0-6) ... Removing libasan5:amd64 (8.3.0-6) ... Removing libatomic1:amd64 (8.3.0-6) ... Removing libcc1-0:amd64 (8.3.0-6) ... Removing libcurl3-gnutls:amd64 (7.64.0-4+deb10u2) ... Removing python3 (3.7.3-1) ... Removing python3.7 (3.7.3-2+deb10u3) ... Removing python3-minimal (3.7.3-1) ... Removing python3.7-minimal (3.7.3-2+deb10u3) ... Removing python2.7 (2.7.16-2+deb10u1) ... Removing libpython2.7-stdlib:amd64 (2.7.16-2+deb10u1) ... Removing perl (5.28.1-6+deb10u1) ... Removing libperl5.28:amd64 (5.28.1-6+deb10u1) ... Removing libgdbm-compat4:amd64 (1.18.1-4) ... Removing libgdbm6:amd64 (1.18.1-4) ... Removing libgomp1:amd64 (8.3.0-6) ... Removing libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... Removing libxml2:amd64 (2.9.4+dfsg1-7+deb10u4) ... Removing libicu63:amd64 (63.1-6+deb10u3) ... Removing libisl19:amd64 (0.20-2) ... Removing libitm1:amd64 (8.3.0-6) ... Removing libkrb5-3:amd64 (1.17-3+deb10u4) ... Removing libk5crypto3:amd64 (1.17-3+deb10u4) ... Removing libkrb5support0:amd64 (1.17-3+deb10u4) ... Removing libkeyutils1:amd64 (1.6-6) ... Removing libkmlbase1:amd64 (1.3.0-7) ... Removing libldap-2.4-2:amd64 (2.4.47+dfsg-3+deb10u7) ... Removing libldap-common (2.4.47+dfsg-3+deb10u7) ... Removing liblsan0:amd64 (8.3.0-6) ... Removing libminizip1:amd64 (1.1-8+b1) ... Removing libmpc3:amd64 (1.1.0-1) ... Removing libpython3-stdlib:amd64 (3.7.3-1) ... Removing libpython3.7-stdlib:amd64 (3.7.3-2+deb10u3) ... find: '/usr/lib/python3': No such file or directory Removing libmpdec2:amd64 (2.4.2-2) ... Removing libmpfr6:amd64 (4.0.2-1) ... Removing libmpx2:amd64 (8.3.0-6) ... Removing libnghttp2-14:amd64 (1.36.0-2+deb10u1) ... Removing libpsl5:amd64 (0.20.2-2) ... Removing python2.7-minimal (2.7.16-2+deb10u1) ... Removing libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... find: '/usr/lib/python2.7': No such file or directory Removing libpython3.7-minimal:amd64 (3.7.3-2+deb10u3) ... find: '/usr/lib/python3': No such file or directory Removing libquadmath0:amd64 (8.3.0-6) ... Removing libreadline7:amd64 (7.0-5) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2) ... Removing libsasl2-2:amd64 (2.1.27+dfsg-1+deb10u2) ... Removing libsasl2-modules-db:amd64 (2.1.27+dfsg-1+deb10u2) ... Removing libsqlite3-0:amd64 (3.27.2-3+deb10u1) ... Removing libssh2-1:amd64 (1.8.0-2.1) ... Removing php7.3-common (7.3.31-1~deb10u1) ... Removing libssl1.1:amd64 (1.1.1n-0+deb10u3) ... Removing libtsan0:amd64 (8.3.0-6) ... Removing libubsan1:amd64 (8.3.0-6) ... Removing liburiparser1:amd64 (0.9.1-1+deb10u1) ... Removing mime-support (3.62) ... Removing perl-modules-5.28 (5.28.1-6+deb10u1) ... Removing php-common (2:69) ... Removing psmisc (23.2-1+deb10u1) ... Removing readline-common (7.0-5) ... Removing ucf (3.0038+nmu1) ... Removing sensible-utils (0.0.12) ... Removing libexpat1:amd64 (2.2.6-2+deb10u4) ... Removing odbcinst (2.3.6-0.1) ... Removing odbcinst1debian2:amd64 (2.3.6-0.1) ... Removing libltdl7:amd64 (2.4.6-9) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... 2m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', 'remove', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bzip2', 'ca-certificates', 'cpp', 'cpp-8', 'cwltool', 'default-mysql-server', 'file', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-glyphicons-halflings', 'g++-', 'g++-8', 'galera-3', 'gawk', 'gcc', 'gcc-8', 'gdal-data', 'iproute2', 'krb5-locales', 'libaec0:amd64', 'libaio1:amd64', 'libapache2-mod-php', 'libapache2-mod-php7.3', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libargon2-1:amd64', 'libarmadillo9', 'libarpack2:amd64', 'libasan5:amd64', 'libatm1:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libbit-vector-perl', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-ares2:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcap2:amd64', 'libcap2-bin', 'libcarp-clan-perl', 'libcc1-0:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcharls2:amd64', 'libconfig-inifiles-perl', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdap25:amd64', 'libdapclient6v5:amd64', 'libdapserver7v5:amd64', 'libdate-calc-perl', 'libdate-calc-xs-perl', 'libdate-manip-perl', 'libdbd-mysql-perl:amd64', 'libdbi-perl:amd64', 'libdeflate0:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libencode-locale-perl', 'libepsilon1:amd64', 'libexpat1:amd64', 'libfcgi-perl', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfyba0:amd64', 'libgcc-8-dev:amd64', 'libgdal20', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgeos-3.7.1:amd64', 'libgeos-c1v5:amd64', 'libgeotiff2:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgssapi-krb5-2:amd64', 'libhdf4-0-alt', 'libhdf5-103:amd64', 'libhtml-parser-perl', 'libhtml-tagset-perl', 'libhtml-template-perl', 'libhts2:amd64', 'libhttp-date-perl', 'libhttp-message-perl', 'libicu63:amd64', 'libimagequant0:amd64', 'libio-html-perl', 'libio-stringy-perl', 'libisl19:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootstrap', 'libjson-c3:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1:amd64', 'libkmlconvenience1:amd64', 'libkmldom1:amd64', 'libkmlengine1:amd64', 'libkmlregionator1:amd64', 'libkmlxsd1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.2-0:amd64', 'liblwp-mediatypes-perl', 'libmagic-mgc', 'libmagic1:amd64', 'libmariadb3:amd64', 'libminizip1:amd64', 'libmnl0:amd64', 'libmpc3:amd64', 'libmpdec2:amd64', 'libmpfr6:amd64', 'libmpx2:amd64', 'libncurses6:amd64', 'libnetcdf13:amd64', 'libnghttp2-14:amd64', 'libnode64:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libodbc1:amd64', 'libogdi3.2', 'libole-storage-lite-perl', 'libopenjp2-7:amd64', 'libpam-cap:amd64', 'libparse-recdescent-perl', 'libpcre2-8-0:amd64', 'libperl5.28:amd64', 'libpng16-16:amd64', 'libpoppler82:amd64', 'libpopt0:amd64', 'libpq5:amd64', 'libprocps7:amd64', 'libproj13:amd64', 'libpsl5:amd64', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libpython3-stdlib:amd64', 'libpython3.7-minimal:amd64', 'libpython3.7-stdlib:amd64', 'libqhull7:amd64', 'libquadmath0:amd64', 'libreadline5:amd64', 'libreadline7:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsigsegv2:amd64', 'libsnappy1v5:amd64', 'libsodium23:amd64', 'libspatialite7:amd64', 'libspreadsheet-writeexcel-perl', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libstdc++-8-dev:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libterm-readkey-perl', 'libtiff5:amd64', 'libtimedate-perl', 'libtsan0:amd64', 'libubsan1:amd64', 'liburi-perl', 'liburiparser1:amd64', 'libuv1:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwrap0:amd64', 'libxerces-c3.2:amd64', 'libxml2:amd64', 'libxslt1.1:amd64', 'libxtables12:amd64', 'libyaml-0-2:amd64', 'linux-libc-dev:amd64', 'lsb-base', 'lsof', 'manpages', 'manpages-dev', 'mariadb-client-10.3', 'mariadb-client-core-10.3', 'mariadb-common', 'mariadb-server-10.3', 'mariadb-server-core-10.3', 'mime-support', 'mysql-common', 'netbase', 'nodejs', 'nodejs-doc', 'odbcinst', 'odbcinst1debian2:amd64', 'openssl', 'perl', 'perl-modules-5.28', 'php-common', 'php-mdb2', 'php-mdb2-driver-mysql', 'php-mysql', 'php-pear', 'php-xml', 'php7.3-cli', 'php7.3-common', 'php7.3-json', 'php7.3-mysql', 'php7.3-opcache', 'php7.3-readline', 'php7.3-xml', 'poppler-data', 'procps', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python', 'python-minimal', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'python3', 'python3-bs4', 'python3-cachecontrol', 'python3-certifi', 'python3-chardet', 'python3-dateutil', 'python3-decorator', 'python3-distutils', 'python3-gdal', 'python3-html5lib', 'python3-idna', 'python3-isodate', 'python3-lib2to3', 'python3-lockfile', 'python3-lxml:amd64', 'python3-minimal', 'python3-mistune', 'python3-mypy', 'python3-mypy-extensions', 'python3-networkx', 'python3-numpy', 'python3-olefile', 'python3-pil:amd64', 'python3-pkg-resources', 'python3-prov', 'python3-psutil', 'python3-pyparsing', 'python3-rdflib', 'python3-rdflib-jsonld', 'python3-requests', 'python3-ruamel.yaml', 'python3-schema-salad', 'python3-scipy', 'python3-shellescape', 'python3-six', 'python3-soupsieve', 'python3-sparqlwrapper', 'python3-typed-ast', 'python3-typing-extensions', 'python3-urllib3', 'python3-webencodings', 'python3-yaml', 'python3.7', 'python3.7-minimal', 'readline-common', 'rsync', 'samtools', 'sensible-utils', 'socat', 'ssl-cert', 'stacks', 'ucf', 'xz-utils', 'stacks-web'] 2m15.0s INFO: Running scripts post_remove 2m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_remove_exceptions'] 2m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_remove_exceptions'] 2m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg', '--purge', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bzip2', 'ca-certificates', 'cpp', 'cpp-8', 'cwltool', 'default-mysql-server', 'file', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-glyphicons-halflings', 'g++', 'g++-8', 'galera-3', 'gawk', 'gcc', 'gcc-8', 'gdal-data', 'iproute2', 'krb5-locales', 'libaec0:amd64', 'libaio1:amd64', 'libapache2-mod-php', 'libapache2-mod-php7.3', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libargon2-1:amd64', 'libarmadillo9', 'libarpack2:amd64', 'libasan5:amd64', 'libatm1:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libbit-vector-perl', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-ares2:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcap2:amd64', 'libcap2-bin', 'libcarp-clan-perl', 'libcc1-0:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcharls2:amd64', 'libconfig-inifiles-perl', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdap25:amd64', 'libdapclient6v5:amd64', 'libdapserver7v5:amd64', 'libdate-calc-perl', 'libdate-calc-xs-perl', 'libdate-manip-perl', 'libdbd-mysql-perl:amd64', 'libdbi-perl:amd64', 'libdeflate0:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libencode-locale-perl', 'libepsilon1:amd64', 'libexpat1:amd64', 'libfcgi-perl', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfyba0:amd64', 'libgcc-8-dev:amd64', 'libgdal20', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgeos-3.7.1:amd64', 'libgeos-c1v5:amd64', 'libgeotiff2:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgssapi-krb5-2:amd64', 'libhdf4-0-alt', 'libhdf5-103:amd64', 'libhtml-parser-perl', 'libhtml-tagset-perl', 'libhtml-template-perl', 'libhts2:amd64', 'libhttp-date-perl', 'libhttp-message-perl', 'libicu63:amd64', 'libimagequant0:amd64', 'libio-html-perl', 'libio-stringy-perl', 'libisl19:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootstrap', 'libjson-c3:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1:amd64', 'libkmlconvenience1:amd64', 'libkmldom1:amd64', 'libkmlengine1:amd64', 'libkmlregionator1:amd64', 'libkmlxsd1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.2-0:amd64', 'liblwp-mediatypes-perl', 'libmagic-mgc', 'libmagic1:amd64', 'libmariadb3:amd64', 'libminizip1:amd64', 'libmnl0:amd64', 'libmpc3:amd64', 'libmpdec2:amd64', 'libmpfr6:amd64', 'libmpx2:amd64', 'libncurses6:amd64', 'libnetcdf13:amd64', 'libnghttp2-14:amd64', 'libnode64:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libodbc1:amd64', 'libogdi3.2', 'libole-storage-lite-perl', 'libopenjp2-7:amd64', 'libpam-cap:amd64', 'libparse-recdescent-perl', 'libpcre2-8-0:amd64', 'libperl5.28:amd64', 'libpng16-16:amd64', 'libpoppler82:amd64', 'libpopt0:amd64', 'libpq5:amd64', 'libprocps7:amd64', 'libproj13:amd64', 'libpsl5:amd64', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libpython3-stdlib:amd64', 'libpython3.7-minimal:amd64', 'libpython3.7-stdlib:amd64', 'libqhull7:amd64', 'libquadmath0:amd64', 'libreadline5:amd64', 'libreadline7:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsigsegv2:amd64', 'libsnappy1v5:amd64', 'libsodium23:amd64', 'libspatialite7:amd64', 'libspreadsheet-writeexcel-perl', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libstdc++-8-dev:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libterm-readkey-perl', 'libtiff5:amd64', 'libtimedate-perl', 'libtsan0:amd64', 'libubsan1:amd64', 'liburi-perl', 'liburiparser1:amd64', 'libuv1:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwrap0:amd64', 'libxerces-c3.2:amd64', 'libxml2:amd64', 'libxslt1.1:amd64', 'libxtables12:amd64', 'libyaml-0-2:amd64', 'linux-libc-dev:amd64', 'lsb-base', 'lsof', 'manpages', 'manpages-dev', 'mariadb-client-10.3', 'mariadb-client-core-10.3', 'mariadb-common', 'mariadb-server-10.3', 'mariadb-server-core-10.3', 'mime-support', 'mysql-common', 'netbase', 'nodejs', 'nodejs-doc', 'odbcinst', 'odbcinst1debian2:amd64', 'openssl', 'perl', 'perl-modules-5.28', 'php-common', 'php-mdb2', 'php-mdb2-driver-mysql', 'php-mysql', 'php-pear', 'php-xml', 'php7.3-cli', 'php7.3-common', 'php7.3-json', 'php7.3-mysql', 'php7.3-opcache', 'php7.3-readline', 'php7.3-xml', 'poppler-data', 'procps', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python', 'python-minimal', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'python3', 'python3-bs4', 'python3-cachecontrol', 'python3-certifi', 'python3-chardet', 'python3-dateutil', 'python3-decorator', 'python3-distutils', 'python3-gdal', 'python3-html5lib', 'python3-idna', 'python3-isodate', 'python3-lib2to3', 'python3-lockfile', 'python3-lxml:amd64', 'python3-minimal', 'python3-mistune', 'python3-mypy', 'python3-mypy-extensions', 'python3-networkx', 'python3-numpy', 'python3-olefile', 'python3-pil:amd64', 'python3-pkg-resources', 'python3-prov', 'python3-psutil', 'python3-pyparsing', 'python3-rdflib', 'python3-rdflib-jsonld', 'python3-requests', 'python3-ruamel.yaml', 'python3-schema-salad', 'python3-scipy', 'python3-shellescape', 'python3-six', 'python3-soupsieve', 'python3-sparqlwrapper', 'python3-typed-ast', 'python3-typing-extensions', 'python3-urllib3', 'python3-webencodings', 'python3-yaml', 'python3.7', 'python3.7-minimal', 'readline-common', 'rsync', 'samtools', 'sensible-utils', 'socat', 'ssl-cert', 'stacks', 'ucf', 'xz-utils'] 2m18.2s DUMP: (Reading database ... 6742 files and directories currently installed.) Purging configuration files for apache2 (2.4.38-3+deb10u8) ... dpkg: warning: ignoring request to remove apache2-bin which isn't installed dpkg: warning: ignoring request to remove apache2-data which isn't installed dpkg: warning: ignoring request to remove apache2-utils which isn't installed dpkg: warning: ignoring request to remove binutils which isn't installed dpkg: warning: ignoring request to remove binutils-common which isn't installed dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove bzip2 which isn't installed Purging configuration files for ca-certificates (20200601~deb10u2) ... Removing dangling symlinks from /etc/ssl/certs... done. dpkg: warning: ignoring request to remove cpp which isn't installed dpkg: warning: ignoring request to remove cpp-8 which isn't installed dpkg: warning: ignoring request to remove cwltool which isn't installed dpkg: warning: ignoring request to remove default-mysql-server which isn't installed dpkg: warning: ignoring request to remove file which isn't installed Purging configuration files for fontconfig-config (2.13.1-2) ... Purging configuration files for fonts-dejavu-core (2.37-1) ... dpkg: warning: ignoring request to remove fonts-glyphicons-halflings which isn't installed dpkg: warning: ignoring request to remove g++ which isn't installed dpkg: warning: ignoring request to remove g++-8 which isn't installed dpkg: warning: ignoring request to remove galera-3 which isn't installed Purging configuration files for gawk (1:4.2.1+dfsg-1) ... dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-8 which isn't installed dpkg: warning: ignoring request to remove gdal-data which isn't installed Purging configuration files for iproute2 (4.20.0-2+deb10u1) ... dpkg: warning: ignoring request to remove krb5-locales which isn't installed dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libaio1 which isn't installed dpkg: warning: ignoring request to remove libapache2-mod-php which isn't installed Purging configuration files for libapache2-mod-php7.3 (7.3.31-1~deb10u1) ... dpkg: warning: ignoring request to remove libapr1 which isn't installed dpkg: warning: ignoring request to remove libaprutil1 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-dbd-sqlite3 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-ldap which isn't installed dpkg: warning: ignoring request to remove libargon2-1 which isn't installed dpkg: warning: ignoring request to remove libarmadillo9 which isn't installed dpkg: warning: ignoring request to remove libarpack2 which isn't installed dpkg: warning: ignoring request to remove libasan5 which isn't installed dpkg: warning: ignoring request to remove libatm1 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libbinutils which isn't installed dpkg: warning: ignoring request to remove libbit-vector-perl which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libc-ares2 which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcap2 which isn't installed dpkg: warning: ignoring request to remove libcap2-bin which isn't installed dpkg: warning: ignoring request to remove libcarp-clan-perl which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed dpkg: warning: ignoring request to remove libcgi-fast-perl which isn't installed dpkg: warning: ignoring request to remove libcgi-pm-perl which isn't installed dpkg: warning: ignoring request to remove libcharls2 which isn't installed dpkg: warning: ignoring request to remove libconfig-inifiles-perl which isn't installed dpkg: warning: ignoring request to remove libcurl3-gnutls which isn't installed dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libdap25 which isn't installed dpkg: warning: ignoring request to remove libdapclient6v5 which isn't installed dpkg: warning: ignoring request to remove libdapserver7v5 which isn't installed dpkg: warning: ignoring request to remove libdate-calc-perl which isn't installed dpkg: warning: ignoring request to remove libdate-calc-xs-perl which isn't installed dpkg: warning: ignoring request to remove libdate-manip-perl which isn't installed dpkg: warning: ignoring request to remove libdbd-mysql-perl which isn't installed dpkg: warning: ignoring request to remove libdbi-perl which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libelf1 which isn't installed dpkg: warning: ignoring request to remove libencode-locale-perl which isn't installed dpkg: warning: ignoring request to remove libepsilon1 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfcgi-perl which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfreexl1 which isn't installed dpkg: warning: ignoring request to remove libfyba0 which isn't installed dpkg: warning: ignoring request to remove libgcc-8-dev which isn't installed dpkg: warning: ignoring request to remove libgdal20 which isn't installed dpkg: warning: ignoring request to remove libgdbm-compat4 which isn't installed dpkg: warning: ignoring request to remove libgdbm6 which isn't installed dpkg: warning: ignoring request to remove libgeos-3.7.1 which isn't installed dpkg: warning: ignoring request to remove libgeos-c1v5 which isn't installed dpkg: warning: ignoring request to remove libgeotiff2 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove libgif7 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgpm2 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... dpkg: warning: ignoring request to remove libhdf4-0-alt which isn't installed dpkg: warning: ignoring request to remove libhdf5-103 which isn't installed dpkg: warning: ignoring request to remove libhtml-parser-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-tagset-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-template-perl which isn't installed dpkg: warning: ignoring request to remove libhts2 which isn't installed dpkg: warning: ignoring request to remove libhttp-date-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-message-perl which isn't installed dpkg: warning: ignoring request to remove libicu63 which isn't installed dpkg: warning: ignoring request to remove libimagequant0 which isn't installed dpkg: warning: ignoring request to remove libio-html-perl which isn't installed dpkg: warning: ignoring request to remove libio-stringy-perl which isn't installed dpkg: warning: ignoring request to remove libisl19 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjansson4 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjs-bootstrap which isn't installed dpkg: warning: ignoring request to remove libjson-c3 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkmlbase1 which isn't installed dpkg: warning: ignoring request to remove libkmlconvenience1 which isn't installed dpkg: warning: ignoring request to remove libkmldom1 which isn't installed dpkg: warning: ignoring request to remove libkmlengine1 which isn't installed dpkg: warning: ignoring request to remove libkmlregionator1 which isn't installed dpkg: warning: ignoring request to remove libkmlxsd1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblcms2-2 which isn't installed dpkg: warning: ignoring request to remove libldap-2.4-2 which isn't installed Purging configuration files for libldap-common (2.4.47+dfsg-3+deb10u7) ... dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove libltdl7 which isn't installed dpkg: warning: ignoring request to remove liblua5.2-0 which isn't installed dpkg: warning: ignoring request to remove liblwp-mediatypes-perl which isn't installed dpkg: warning: ignoring request to remove libmagic-mgc which isn't installed Purging configuration files for libmagic1:amd64 (1:5.35-4+deb10u2) ... dpkg: warning: ignoring request to remove libmariadb3 which isn't installed dpkg: warning: ignoring request to remove libminizip1 which isn't installed dpkg: warning: ignoring request to remove libmnl0 which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpdec2 which isn't installed dpkg: warning: ignoring request to remove libmpfr6 which isn't installed dpkg: warning: ignoring request to remove libmpx2 which isn't installed dpkg: warning: ignoring request to remove libncurses6 which isn't installed dpkg: warning: ignoring request to remove libnetcdf13 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnode64 which isn't installed dpkg: warning: ignoring request to remove libnspr4 which isn't installed dpkg: warning: ignoring request to remove libnss3 which isn't installed dpkg: warning: ignoring request to remove libodbc1 which isn't installed dpkg: warning: ignoring request to remove libogdi3.2 which isn't installed dpkg: warning: ignoring request to remove libole-storage-lite-perl which isn't installed dpkg: warning: ignoring request to remove libopenjp2-7 which isn't installed Purging configuration files for libpam-cap:amd64 (1:2.25-2) ... dpkg: warning: ignoring request to remove libparse-recdescent-perl which isn't installed dpkg: warning: ignoring request to remove libpcre2-8-0 which isn't installed dpkg: warning: ignoring request to remove libperl5.28 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpoppler82 which isn't installed dpkg: warning: ignoring request to remove libpopt0 which isn't installed dpkg: warning: ignoring request to remove libpq5 which isn't installed dpkg: warning: ignoring request to remove libprocps7 which isn't installed dpkg: warning: ignoring request to remove libproj13 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libpython-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython2-stdlib which isn't installed Purging configuration files for libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... dpkg: warning: ignoring request to remove libpython2.7-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed Purging configuration files for libpython3.7-minimal:amd64 (3.7.3-2+deb10u3) ... dpkg: warning: ignoring request to remove libpython3.7-stdlib which isn't installed dpkg: warning: ignoring request to remove libqhull7 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libreadline5 which isn't installed dpkg: warning: ignoring request to remove libreadline7 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed Purging configuration files for libsasl2-modules:amd64 (2.1.27+dfsg-1+deb10u2) ... dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsigsegv2 which isn't installed dpkg: warning: ignoring request to remove libsnappy1v5 which isn't installed dpkg: warning: ignoring request to remove libsodium23 which isn't installed dpkg: warning: ignoring request to remove libspatialite7 which isn't installed dpkg: warning: ignoring request to remove libspreadsheet-writeexcel-perl which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed Purging configuration files for libssl1.1:amd64 (1.1.1n-0+deb10u3) ... dpkg: warning: ignoring request to remove libstdc++-8-dev which isn't installed dpkg: warning: ignoring request to remove libsuperlu5 which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed dpkg: warning: ignoring request to remove libterm-readkey-perl which isn't installed dpkg: warning: ignoring request to remove libtiff5 which isn't installed dpkg: warning: ignoring request to remove libtimedate-perl which isn't installed dpkg: warning: ignoring request to remove libtsan0 which isn't installed dpkg: warning: ignoring request to remove libubsan1 which isn't installed dpkg: warning: ignoring request to remove liburi-perl which isn't installed dpkg: warning: ignoring request to remove liburiparser1 which isn't installed dpkg: warning: ignoring request to remove libuv1 which isn't installed dpkg: warning: ignoring request to remove libwebp6 which isn't installed dpkg: warning: ignoring request to remove libwebpdemux2 which isn't installed dpkg: warning: ignoring request to remove libwebpmux3 which isn't installed Purging configuration files for libwrap0:amd64 (7.6.q-28) ... dpkg: warning: ignoring request to remove libxerces-c3.2 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxslt1.1 which isn't installed dpkg: warning: ignoring request to remove libxtables12 which isn't installed dpkg: warning: ignoring request to remove libyaml-0-2 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed dpkg: warning: ignoring request to remove lsb-base which isn't installed dpkg: warning: ignoring request to remove lsof which isn't installed dpkg: warning: ignoring request to remove manpages which isn't installed dpkg: warning: ignoring request to remove manpages-dev which isn't installed Purging configuration files for mariadb-client-10.3 (1:10.3.34-0+deb10u1) ... dpkg: warning: ignoring request to remove mariadb-client-core-10.3 which isn't installed Purging configuration files for mariadb-common (1:10.3.34-0+deb10u1) ... Purging configuration files for mariadb-server-10.3 (1:10.3.34-0+deb10u1) ... dpkg: warning: ignoring request to remove mariadb-server-core-10.3 which isn't installed Purging configuration files for mime-support (3.62) ... Purging configuration files for mysql-common (5.8+1.0.5) ... dpkg: warning: while removing mysql-common, directory '/etc/mysql' not empty so not removed Purging configuration files for netbase (5.6) ... dpkg: warning: ignoring request to remove nodejs which isn't installed dpkg: warning: ignoring request to remove nodejs-doc which isn't installed Purging configuration files for odbcinst (2.3.6-0.1) ... dpkg: warning: ignoring request to remove odbcinst1debian2 which isn't installed Purging configuration files for openssl (1.1.1n-0+deb10u3) ... dpkg: warning: while removing openssl, directory '/etc/ssl/private' not empty so not removed dpkg: warning: while removing openssl, directory '/etc/ssl/certs' not empty so not removed Purging configuration files for perl (5.28.1-6+deb10u1) ... dpkg: warning: ignoring request to remove perl-modules-5.28 which isn't installed Purging configuration files for php-common (2:69) ... dpkg: warning: ignoring request to remove php-mdb2 which isn't installed dpkg: warning: ignoring request to remove php-mdb2-driver-mysql which isn't installed dpkg: warning: ignoring request to remove php-mysql which isn't installed Purging configuration files for php-pear (1:1.10.6+submodules+notgz-1.1+deb10u2) ... dpkg: warning: ignoring request to remove php-xml which isn't installed Purging configuration files for php7.3-cli (7.3.31-1~deb10u1) ... Purging configuration files for php7.3-common (7.3.31-1~deb10u1) ... dpkg: warning: while removing php7.3-common, directory '/etc/php/7.3/mods-available' not empty so not removed Purging configuration files for php7.3-json (7.3.31-1~deb10u1) ... Purging configuration files for php7.3-mysql (7.3.31-1~deb10u1) ... Purging configuration files for php7.3-opcache (7.3.31-1~deb10u1) ... Purging configuration files for php7.3-readline (7.3.31-1~deb10u1) ... Purging configuration files for php7.3-xml (7.3.31-1~deb10u1) ... Purging configuration files for poppler-data (0.4.9-2) ... Purging configuration files for procps (2:3.3.15-2) ... dpkg: warning: ignoring request to remove proj-bin which isn't installed dpkg: warning: ignoring request to remove proj-data which isn't installed Purging configuration files for psmisc (23.2-1+deb10u1) ... dpkg: warning: ignoring request to remove publicsuffix which isn't installed Purging configuration files for python (2.7.16-1) ... dpkg: warning: ignoring request to remove python-minimal which isn't installed dpkg: warning: ignoring request to remove python2 which isn't installed dpkg: warning: ignoring request to remove python2-minimal which isn't installed dpkg: warning: ignoring request to remove python2.7 which isn't installed Purging configuration files for python2.7-minimal (2.7.16-2+deb10u1) ... Purging configuration files for python3 (3.7.3-1) ... dpkg: warning: ignoring request to remove python3-bs4 which isn't installed dpkg: warning: ignoring request to remove python3-cachecontrol which isn't installed dpkg: warning: ignoring request to remove python3-certifi which isn't installed dpkg: warning: ignoring request to remove python3-chardet which isn't installed dpkg: warning: ignoring request to remove python3-dateutil which isn't installed dpkg: warning: ignoring request to remove python3-decorator which isn't installed dpkg: warning: ignoring request to remove python3-distutils which isn't installed dpkg: warning: ignoring request to remove python3-gdal which isn't installed dpkg: warning: ignoring request to remove python3-html5lib which isn't installed dpkg: warning: ignoring request to remove python3-idna which isn't installed dpkg: warning: ignoring request to remove python3-isodate which isn't installed dpkg: warning: ignoring request to remove python3-lib2to3 which isn't installed dpkg: warning: ignoring request to remove python3-lockfile which isn't installed dpkg: warning: ignoring request to remove python3-lxml which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-mistune which isn't installed dpkg: warning: ignoring request to remove python3-mypy which isn't installed dpkg: warning: ignoring request to remove python3-mypy-extensions which isn't installed dpkg: warning: ignoring request to remove python3-networkx which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-olefile which isn't installed dpkg: warning: ignoring request to remove python3-pil which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-prov which isn't installed dpkg: warning: ignoring request to remove python3-psutil which isn't installed dpkg: warning: ignoring request to remove python3-pyparsing which isn't installed dpkg: warning: ignoring request to remove python3-rdflib which isn't installed dpkg: warning: ignoring request to remove python3-rdflib-jsonld which isn't installed dpkg: warning: ignoring request to remove python3-requests which isn't installed dpkg: warning: ignoring request to remove python3-ruamel.yaml which isn't installed dpkg: warning: ignoring request to remove python3-schema-salad which isn't installed dpkg: warning: ignoring request to remove python3-scipy which isn't installed dpkg: warning: ignoring request to remove python3-shellescape which isn't installed dpkg: warning: ignoring request to remove python3-six which isn't installed dpkg: warning: ignoring request to remove python3-soupsieve which isn't installed dpkg: warning: ignoring request to remove python3-sparqlwrapper which isn't installed dpkg: warning: ignoring request to remove python3-typed-ast which isn't installed dpkg: warning: ignoring request to remove python3-typing-extensions which isn't installed dpkg: warning: ignoring request to remove python3-urllib3 which isn't installed dpkg: warning: ignoring request to remove python3-webencodings which isn't installed dpkg: warning: ignoring request to remove python3-yaml which isn't installed dpkg: warning: ignoring request to remove python3.7 which isn't installed Purging configuration files for python3.7-minimal (3.7.3-2+deb10u3) ... Purging configuration files for readline-common (7.0-5) ... Purging configuration files for rsync (3.1.3-6) ... dpkg: warning: ignoring request to remove samtools which isn't installed dpkg: warning: ignoring request to remove sensible-utils which isn't installed dpkg: warning: ignoring request to remove socat which isn't installed Purging configuration files for ssl-cert (1.0.39) ... dpkg: warning: ignoring request to remove stacks which isn't installed Purging configuration files for ucf (3.0038+nmu1) ... dpkg: warning: ignoring request to remove xz-utils which isn't installed 2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg', '--purge', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bzip2', 'ca-certificates', 'cpp', 'cpp-8', 'cwltool', 'default-mysql-server', 'file', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-glyphicons-halflings', 'g++', 'g++-8', 'galera-3', 'gawk', 'gcc', 'gcc-8', 'gdal-data', 'iproute2', 'krb5-locales', 'libaec0:amd64', 'libaio1:amd64', 'libapache2-mod-php', 'libapache2-mod-php7.3', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libargon2-1:amd64', 'libarmadillo9', 'libarpack2:amd64', 'libasan5:amd64', 'libatm1:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libbit-vector-perl', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-ares2:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcap2:amd64', 'libcap2-bin', 'libcarp-clan-perl', 'libcc1-0:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcharls2:amd64', 'libconfig-inifiles-perl', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdap25:amd64', 'libdapclient6v5:amd64', 'libdapserver7v5:amd64', 'libdate-calc-perl', 'libdate-calc-xs-perl', 'libdate-manip-perl', 'libdbd-mysql-perl:amd64', 'libdbi-perl:amd64', 'libdeflate0:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libencode-locale-perl', 'libepsilon1:amd64', 'libexpat1:amd64', 'libfcgi-perl', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfyba0:amd64', 'libgcc-8-dev:amd64', 'libgdal20', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgeos-3.7.1:amd64', 'libgeos-c1v5:amd64', 'libgeotiff2:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgssapi-krb5-2:amd64', 'libhdf4-0-alt', 'libhdf5-103:amd64', 'libhtml-parser-perl', 'libhtml-tagset-perl', 'libhtml-template-perl', 'libhts2:amd64', 'libhttp-date-perl', 'libhttp-message-perl', 'libicu63:amd64', 'libimagequant0:amd64', 'libio-html-perl', 'libio-stringy-perl', 'libisl19:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootstrap', 'libjson-c3:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1:amd64', 'libkmlconvenience1:amd64', 'libkmldom1:amd64', 'libkmlengine1:amd64', 'libkmlregionator1:amd64', 'libkmlxsd1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.2-0:amd64', 'liblwp-mediatypes-perl', 'libmagic-mgc', 'libmagic1:amd64', 'libmariadb3:amd64', 'libminizip1:amd64', 'libmnl0:amd64', 'libmpc3:amd64', 'libmpdec2:amd64', 'libmpfr6:amd64', 'libmpx2:amd64', 'libncurses6:amd64', 'libnetcdf13:amd64', 'libnghttp2-14:amd64', 'libnode64:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libodbc1:amd64', 'libogdi3.2', 'libole-storage-lite-perl', 'libopenjp2-7:amd64', 'libpam-cap:amd64', 'libparse-recdescent-perl', 'libpcre2-8-0:amd64', 'libperl5.28:amd64', 'libpng16-16:amd64', 'libpoppler82:amd64', 'libpopt0:amd64', 'libpq5:amd64', 'libprocps7:amd64', 'libproj13:amd64', 'libpsl5:amd64', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libpython3-stdlib:amd64', 'libpython3.7-minimal:amd64', 'libpython3.7-stdlib:amd64', 'libqhull7:amd64', 'libquadmath0:amd64', 'libreadline5:amd64', 'libreadline7:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsigsegv2:amd64', 'libsnappy1v5:amd64', 'libsodium23:amd64', 'libspatialite7:amd64', 'libspreadsheet-writeexcel-perl', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libstdc++-8-dev:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libterm-readkey-perl', 'libtiff5:amd64', 'libtimedate-perl', 'libtsan0:amd64', 'libubsan1:amd64', 'liburi-perl', 'liburiparser1:amd64', 'libuv1:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwrap0:amd64', 'libxerces-c3.2:amd64', 'libxml2:amd64', 'libxslt1.1:amd64', 'libxtables12:amd64', 'libyaml-0-2:amd64', 'linux-libc-dev:amd64', 'lsb-base', 'lsof', 'manpages', 'manpages-dev', 'mariadb-client-10.3', 'mariadb-client-core-10.3', 'mariadb-common', 'mariadb-server-10.3', 'mariadb-server-core-10.3', 'mime-support', 'mysql-common', 'netbase', 'nodejs', 'nodejs-doc', 'odbcinst', 'odbcinst1debian2:amd64', 'openssl', 'perl', 'perl-modules-5.28', 'php-common', 'php-mdb2', 'php-mdb2-driver-mysql', 'php-mysql', 'php-pear', 'php-xml', 'php7.3-cli', 'php7.3-common', 'php7.3-json', 'php7.3-mysql', 'php7.3-opcache', 'php7.3-readline', 'php7.3-xml', 'poppler-data', 'procps', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python', 'python-minimal', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'python3', 'python3-bs4', 'python3-cachecontrol', 'python3-certifi', 'python3-chardet', 'python3-dateutil', 'python3-decorator', 'python3-distutils', 'python3-gdal', 'python3-html5lib', 'python3-idna', 'python3-isodate', 'python3-lib2to3', 'python3-lockfile', 'python3-lxml:amd64', 'python3-minimal', 'python3-mistune', 'python3-mypy', 'python3-mypy-extensions', 'python3-networkx', 'python3-numpy', 'python3-olefile', 'python3-pil:amd64', 'python3-pkg-resources', 'python3-prov', 'python3-psutil', 'python3-pyparsing', 'python3-rdflib', 'python3-rdflib-jsonld', 'python3-requests', 'python3-ruamel.yaml', 'python3-schema-salad', 'python3-scipy', 'python3-shellescape', 'python3-six', 'python3-soupsieve', 'python3-sparqlwrapper', 'python3-typed-ast', 'python3-typing-extensions', 'python3-urllib3', 'python3-webencodings', 'python3-yaml', 'python3.7', 'python3.7-minimal', 'readline-common', 'rsync', 'samtools', 'sensible-utils', 'socat', 'ssl-cert', 'stacks', 'ucf', 'xz-utils'] 2m18.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg', '--purge', 'stacks-web'] 2m18.2s DUMP: (Reading database ... 6469 files and directories currently installed.) Purging configuration files for stacks-web (2.2+dfsg-1) ... 2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg', '--purge', 'stacks-web'] 2m18.2s INFO: Running scripts post_purge 2m18.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_purge_exceptions'] 2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_purge_exceptions'] 2m18.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg', '--purge', '--pending'] 2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg', '--purge', '--pending'] 2m18.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg', '--remove', '--pending'] 2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg', '--remove', '--pending'] 2m18.2s INFO: Running scripts post_test 2m18.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_test_exceptions'] 2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'tmp/scripts/post_test_exceptions'] 2m18.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 2m18.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 2m19.2s DEBUG: No broken symlinks as far as we can find. 2m19.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg-divert', '--list'] 2m19.2s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 2m19.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'dpkg-divert', '--list'] 2m19.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', 'clean'] 2m19.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp1ju9econ', 'apt-get', 'clean'] 2m19.3s DEBUG: Recording chroot state 2m19.8s INFO: Warning: Package purging left files on system: /etc/mysql/ owned by: mariadb-server-10.3, mariadb-client-10.3, mariadb-common, mysql-common /etc/mysql/debian.cnf not owned /var/lib/mysql/ not owned /var/lib/mysql/aria_log.00000001 not owned /var/lib/mysql/aria_log_control not owned /var/lib/mysql/debian-10.3.flag not owned /var/lib/mysql/ib_buffer_pool not owned /var/lib/mysql/ib_logfile0 not owned /var/lib/mysql/ib_logfile1 not owned /var/lib/mysql/ibdata1 not owned /var/lib/mysql/multi-master.info not owned /var/lib/mysql/mysql/ not owned /var/lib/mysql/mysql/column_stats.MYD not owned /var/lib/mysql/mysql/column_stats.MYI not owned /var/lib/mysql/mysql/column_stats.frm not owned /var/lib/mysql/mysql/columns_priv.MYD not owned /var/lib/mysql/mysql/columns_priv.MYI not owned /var/lib/mysql/mysql/columns_priv.frm not owned /var/lib/mysql/mysql/db.MYD not owned /var/lib/mysql/mysql/db.MYI not owned /var/lib/mysql/mysql/db.frm not owned /var/lib/mysql/mysql/db.opt not owned /var/lib/mysql/mysql/event.MYD not owned /var/lib/mysql/mysql/event.MYI not owned /var/lib/mysql/mysql/event.frm not owned /var/lib/mysql/mysql/func.MYD not owned /var/lib/mysql/mysql/func.MYI not owned /var/lib/mysql/mysql/func.frm not owned /var/lib/mysql/mysql/general_log.CSM not owned /var/lib/mysql/mysql/general_log.CSV not owned /var/lib/mysql/mysql/general_log.frm not owned /var/lib/mysql/mysql/gtid_slave_pos.frm not owned /var/lib/mysql/mysql/gtid_slave_pos.ibd not owned /var/lib/mysql/mysql/help_category.MYD not owned /var/lib/mysql/mysql/help_category.MYI not owned /var/lib/mysql/mysql/help_category.frm not owned /var/lib/mysql/mysql/help_keyword.MYD not owned /var/lib/mysql/mysql/help_keyword.MYI not owned /var/lib/mysql/mysql/help_keyword.frm not owned /var/lib/mysql/mysql/help_relation.MYD not owned /var/lib/mysql/mysql/help_relation.MYI not owned /var/lib/mysql/mysql/help_relation.frm not owned /var/lib/mysql/mysql/help_topic.MYD not owned /var/lib/mysql/mysql/help_topic.MYI not owned /var/lib/mysql/mysql/help_topic.frm not owned /var/lib/mysql/mysql/host.MYD not owned /var/lib/mysql/mysql/host.MYI not owned /var/lib/mysql/mysql/host.frm not owned /var/lib/mysql/mysql/index_stats.MYD not owned /var/lib/mysql/mysql/index_stats.MYI not owned /var/lib/mysql/mysql/index_stats.frm not owned /var/lib/mysql/mysql/innodb_index_stats.frm not owned /var/lib/mysql/mysql/innodb_index_stats.ibd not owned /var/lib/mysql/mysql/innodb_table_stats.frm not owned /var/lib/mysql/mysql/innodb_table_stats.ibd not owned /var/lib/mysql/mysql/plugin.MYD not owned /var/lib/mysql/mysql/plugin.MYI not owned /var/lib/mysql/mysql/plugin.frm not owned /var/lib/mysql/mysql/proc.MYD not owned /var/lib/mysql/mysql/proc.MYI not owned /var/lib/mysql/mysql/proc.frm not owned /var/lib/mysql/mysql/procs_priv.MYD not owned /var/lib/mysql/mysql/procs_priv.MYI not owned /var/lib/mysql/mysql/procs_priv.frm not owned /var/lib/mysql/mysql/proxies_priv.MYD not owned /var/lib/mysql/mysql/proxies_priv.MYI not owned /var/lib/mysql/mysql/proxies_priv.frm not owned /var/lib/mysql/mysql/roles_mapping.MYD not owned /var/lib/mysql/mysql/roles_mapping.MYI not owned /var/lib/mysql/mysql/roles_mapping.frm not owned /var/lib/mysql/mysql/servers.MYD not owned /var/lib/mysql/mysql/servers.MYI not owned /var/lib/mysql/mysql/servers.frm not owned /var/lib/mysql/mysql/slow_log.CSM not owned /var/lib/mysql/mysql/slow_log.CSV not owned /var/lib/mysql/mysql/slow_log.frm not owned /var/lib/mysql/mysql/table_stats.MYD not owned /var/lib/mysql/mysql/table_stats.MYI not owned /var/lib/mysql/mysql/table_stats.frm not owned /var/lib/mysql/mysql/tables_priv.MYD not owned /var/lib/mysql/mysql/tables_priv.MYI not owned /var/lib/mysql/mysql/tables_priv.frm not owned /var/lib/mysql/mysql/time_zone.MYD not owned /var/lib/mysql/mysql/time_zone.MYI not owned /var/lib/mysql/mysql/time_zone.frm not owned /var/lib/mysql/mysql/time_zone_leap_second.MYD not owned /var/lib/mysql/mysql/time_zone_leap_second.MYI not owned /var/lib/mysql/mysql/time_zone_leap_second.frm not owned /var/lib/mysql/mysql/time_zone_name.MYD not owned /var/lib/mysql/mysql/time_zone_name.MYI not owned /var/lib/mysql/mysql/time_zone_name.frm not owned /var/lib/mysql/mysql/time_zone_transition.MYD not owned /var/lib/mysql/mysql/time_zone_transition.MYI not owned /var/lib/mysql/mysql/time_zone_transition.frm not owned /var/lib/mysql/mysql/time_zone_transition_type.MYD not owned /var/lib/mysql/mysql/time_zone_transition_type.MYI not owned /var/lib/mysql/mysql/time_zone_transition_type.frm not owned /var/lib/mysql/mysql/transaction_registry.frm not owned /var/lib/mysql/mysql/transaction_registry.ibd not owned /var/lib/mysql/mysql/user.MYD not owned /var/lib/mysql/mysql/user.MYI not owned /var/lib/mysql/mysql/user.frm not owned /var/lib/mysql/mysql_upgrade_info not owned /var/lib/mysql/performance_schema/ not owned /var/lib/mysql/performance_schema/db.opt not owned 2m19.8s INFO: PASS: Installation and purging test. 2m20.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/shm'] 2m20.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/shm'] 2m20.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/console'] 2m20.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/console'] 2m20.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/ptmx'] 2m20.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/ptmx'] 2m20.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/pts'] 2m20.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/dev/pts'] 2m20.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/proc'] 2m20.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp1ju9econ/proc'] 2m20.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 2m20.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp1ju9econ'] 2m20.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp1ju9econ 2m20.3s INFO: PASS: All tests. 2m20.3s INFO: piuparts run ends. ret=0 End: 2024-04-15 15:43:03 GMT