Start: 2024-07-27 15:13:52 GMT Package: dolfin-doc Source: dolfin Version: 2018.1.0.post1-16 Installed-Size: 21648 Maintainer: Debian Science Team Architecture: all Depends: libdolfin-dev (>= 2018.1.0.post1-16), python3-dolfin (>= 2018.1.0.post1-16) Suggests: cmake (>= 2.8.0) Description: Documentation and demo programs for DOLFIN Homepage: http://fenicsproject.org Description-md5: 6d80f35b15cb807f29f485694db24fae Tag: devel::lang:c++, devel::lang:python, devel::library, field::mathematics, implemented-in::c++, implemented-in::python, role::devel-lib, role::program Section: doc Priority: optional Filename: pool/main/d/dolfin/dolfin-doc_2018.1.0.post1-16_all.deb Size: 4134736 MD5sum: 29c8da4ff5902dba09d4676eb97323e9 SHA256: 70686de49b0fd1bdadd572fe735ee86d18f634069dafa2d8063369dde695983a Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts-log-alternatives --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz -d buster --no-upgrade-test --apt dolfin-doc=2018.1.0.post1-16 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.2 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts-log-alternatives --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz -d buster --no-upgrade-test --apt dolfin-doc=2018.1.0.post1-16 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-31-amd64 #1 SMP Debian 5.10.221-1 (2024-07-14) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpv4la8yf0 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpv4la8yf0 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/buster-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ buster main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts-log-alternatives to /srv/piuparts.debian.org/tmp/tmpv4la8yf0/tmp/scripts/ 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpv4la8yf0/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', 'update'] 0m1.7s DUMP: Hit:1 http://deb.debian.org/debian buster InRelease Reading package lists... 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', 'update'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', '-yf', 'dist-upgrade'] 0m2.1s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', '-yf', 'dist-upgrade'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.5s DUMP: f6fc0f2636004ef589309651dfd778f4 - 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.5s INFO: Running scripts post_setup 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_dummy_users'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_dummy_users'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_forbid_home'] 0m3.5s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_forbid_home'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.5s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_minimize'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_minimize'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_zz_backports'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_setup_zz_backports'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', 'clean'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', 'clean'] 0m3.5s DEBUG: Recording chroot state 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.2s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 1.8.2.3 install ok installed base-files base-files 10.3+deb10u13 install ok installed base-passwd base-passwd 3.5.46 install ok installed bash bash 5.0-4 install ok installed bsdutils bsdutils 1:2.33.1-0.1 install ok installed coreutils coreutils 8.30-3 install ok installed dash dash 0.5.10.2-5 install ok installed debconf debconf 1.5.71+deb10u1 install ok installed debian-archive-keyring debian-archive-keyring 2019.1+deb10u1 install ok installed debianutils debianutils 4.8.6.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.8 install ok installed e2fsprogs e2fsprogs 1.44.5-1+deb10u3 install ok installed fdisk fdisk 2.33.1-0.1 install ok installed findutils findutils 4.6.0+git+20190209-2 install ok installed gcc-8-base:amd64 gcc-8-base 8.3.0-6 install ok installed gpgv gpgv 2.2.12-1+deb10u2 install ok installed grep grep 3.3-1 install ok installed gzip gzip 1.9-3+deb10u1 install ok installed hostname hostname 3.21 install ok installed init-system-helpers init-system-helpers 1.56+nmu1 install ok installed libacl1:amd64 libacl1 2.2.53-4 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.3 install ok installed libattr1:amd64 libattr1 1:2.4.48-4 install ok installed libaudit-common libaudit-common 1:2.8.4-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.4-3 install ok installed libblkid1:amd64 libblkid1 2.33.1-0.1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u1 install ok installed libc-bin libc-bin 2.28-10+deb10u1 install ok installed libc6:amd64 libc6 2.28-10+deb10u1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5+deb10u1 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4+deb10u1 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u8 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1+deb10u1 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1+deb10u1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+deb10u1 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u2 install ok installed libnettle6:amd64 libnettle6 3.4.1-1+deb10u1 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2+deb10u1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u8 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u2 install ok installed libudev1:amd64 libudev1 241-7~deb10u8 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3+deb10u2 install ok installed login login 1:4.5-1.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.33.1-0.1 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u2 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u2 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed tzdata tzdata 2021a-0+deb10u6 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1+deb10u1 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg-divert', '--list'] 0m4.2s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg-divert', '--list'] 0m4.2s INFO: Running scripts is_testable 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/is_testable_uninstallable'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/is_testable_uninstallable'] 0m4.2s INFO: apt-cache does not know about any of the requested packages 0m4.2s INFO: Running scripts pre_test 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_test_exceptions'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_test_exceptions'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_test_root_password'] 0m4.2s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_test_root_password'] 0m4.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 0m4.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 0m5.5s DEBUG: No broken symlinks as far as we can find. 0m5.5s INFO: Running scripts pre_install 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_database-server'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_database-server'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_exceptions'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_exceptions'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_extras'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_extras'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_log_alternatives'] 0m5.5s DUMP: Adding 'local diversion of /usr/bin/update-alternatives to /usr/bin/update-alternatives.orig' dpkg-divert: warning: diverting file '/usr/bin/update-alternatives' from an Essential package with rename is dangerous, use --no-rename 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_install_log_alternatives'] 0m5.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 0m6.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 0m6.8s DEBUG: No broken symlinks as far as we can find. 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-cache', 'policy'] 0m7.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian buster/main amd64 Packages release v=10.13,o=Debian,a=oldoldstable,n=buster,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-cache', 'policy'] 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-cache', 'policy', 'dolfin-doc'] 0m7.9s DUMP: dolfin-doc: Installed: (none) Candidate: 2018.1.0.post1-16 Version table: 2018.1.0.post1-16 500 500 http://deb.debian.org/debian buster/main amd64 Packages 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-cache', 'policy', 'dolfin-doc'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', '-y', 'install', 'dolfin-doc=2018.1.0.post1-16'] 1m5.9s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: autoconf automake autotools-dev binutils binutils-common binutils-x86-64-linux-gnu cmake cmake-data cpp cpp-8 fonts-mathjax gcc gcc-8 gfortran gfortran-8 ibverbs-providers icu-devtools libaec-dev libaec0 libamd2 libarchive13 libarpack2 libarpack2-dev libasan5 libatomic1 libbinutils libblas-dev libblas3 libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-system1.67-dev libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost1.67-dev libbsd0 libbtf1 libc-dev-bin libc6-dev libcamd2 libcc1-0 libccolamd2 libcholmod3 libcolamd2 libcombblas1.16.0 libcurl4 libcxsparse3 libdolfin-dev libdolfin2018.1 libdpkg-perl libedit2 libeigen3-dev libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libgcc-8-dev libgdbm-compat4 libgdbm6 libgfortran-8-dev libgfortran5 libglib2.0-0 libgomp1 libgraphblas2 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libhwloc-dev libhwloc-plugins libhwloc5 libhypre-2.15.1 libhypre-dev libibverbs-dev libibverbs1 libicu-dev libicu63 libisl19 libitm1 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjs-mathjax libjsoncpp1 libk5crypto3 libkeyutils1 libklu1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libldl2 liblsan0 libltdl-dev libltdl7 libmetis5 libmongoose2 libmpc3 libmpdec2 libmpfr6 libmpx2 libmumps-5.1.2 libmumps-dev libncurses6 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libparpack2 libparpack2-dev libpciaccess0 libperl5.28 libpetsc-real3.10 libpetsc-real3.10-dev libpetsc3.10-dev-common libpmix2 libprocps7 libpsl5 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libptscotch-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libquadmath0 librbio2 librdmacm1 libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.0 libscotch-6.0 libscotch-dev libsigsegv2 libslepc-real3.10 libslepc-real3.10-dev libspqr2 libsqlite3-0 libssh2-1 libssl-dev libssl1.1 libstdc++-8-dev libsuitesparse-dev libsuitesparseconfig5 libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist6 libsuperlu5 libsz2 libtsan0 libubsan1 libumfpack5 libuv1 libxml2 libxml2-dev linux-libc-dev lsb-base m4 mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client perl perl-modules-5.28 pkg-config procps pybind11-dev python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-dijitso python3-dolfin python3-ffc python3-fiat python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-petsc4py python3-petsc4py-real python3-pkg-resources python3-pkgconfig python3-ply python3-pybind11 python3-six python3-slepc4py python3-slepc4py-real python3-sympy python3-ufl python3.7 python3.7-minimal readline-common swig swig3.0 zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc libtool gettext binutils-doc cmake-doc ninja-build cpp-doc gcc-8-locales gcc-multilib make manpages-dev flex bison gdb gcc-doc gcc-8-multilib gcc-8-doc libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan5-dbg liblsan0-dbg libtsan0-dbg libubsan1-dbg libmpx2-dbg libquadmath0-dbg gfortran-multilib gfortran-doc gfortran-8-multilib gfortran-8-doc libgfortran5-dbg libcoarrays-dev lrzip liblapack-doc libboost-doc libboost-graph1.67-dev libboost1.67-doc libboost-container1.67-dev libboost-context1.67-dev libboost-coroutine1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-graph-parallel1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-test1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev glibc-doc debian-keyring gnupg | gnupg2 patch sensible-utils git bzr libeigen3-doc libfftw3-doc gdbm-l10n krb5-doc krb5-user libhdf5-doc libhwloc-contrib-plugins icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc libtool-doc openmpi-doc pciutils petsc-dev libpetsc-real3.10-dbg petsc3.10-doc libluminate-dev scalapack-doc libslepc3.10-dev-examples slepc3.10-doc libssl-doc libstdc++-8-doc libsuperlu-doc m4-doc opencl-icd keychain libpam-ssh monkeysphere ssh-askpass perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libb-debug-perl liblocale-codes-perl dpkg-dev pybind11-doc python-doc python-tk python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python-dijitso-doc python3-gmpy2 python3-matplotlib python-mpmath-doc python-numpy-doc python3-dev python3-pytest python3-numpy-dbg python3-setuptools python-ply-doc python-slepc4py-docs texlive-fonts-extra dvipng python-sympy-doc python-ufl-doc python3.7-venv python3.7-doc readline-doc swig-doc swig-examples swig3.0-examples swig3.0-doc Recommended packages: make manpages manpages-dev ca-certificates libfile-fcntllock-perl liblocale-gettext-perl bzip2 xz-utils libglib2.0-data shared-mime-info xdg-user-dirs javascript-common krb5-locales libtool libgpm2 libcoarrays-openmpi-dev libpetsc3.10-dev-examples ksh | mksh | pdksh | zsh publicsuffix libsasl2-modules file xauth netbase psmisc python-petsc4py-docs python-slepc4py-docs python3-pil ipython3 The following NEW packages will be installed: autoconf automake autotools-dev binutils binutils-common binutils-x86-64-linux-gnu cmake cmake-data cpp cpp-8 dolfin-doc fonts-mathjax gcc gcc-8 gfortran gfortran-8 ibverbs-providers icu-devtools libaec-dev libaec0 libamd2 libarchive13 libarpack2 libarpack2-dev libasan5 libatomic1 libbinutils libblas-dev libblas3 libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-system1.67-dev libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost1.67-dev libbsd0 libbtf1 libc-dev-bin libc6-dev libcamd2 libcc1-0 libccolamd2 libcholmod3 libcolamd2 libcombblas1.16.0 libcurl4 libcxsparse3 libdolfin-dev libdolfin2018.1 libdpkg-perl libedit2 libeigen3-dev libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libgcc-8-dev libgdbm-compat4 libgdbm6 libgfortran-8-dev libgfortran5 libglib2.0-0 libgomp1 libgraphblas2 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libhwloc-dev libhwloc-plugins libhwloc5 libhypre-2.15.1 libhypre-dev libibverbs-dev libibverbs1 libicu-dev libicu63 libisl19 libitm1 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjs-mathjax libjsoncpp1 libk5crypto3 libkeyutils1 libklu1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libldl2 liblsan0 libltdl-dev libltdl7 libmetis5 libmongoose2 libmpc3 libmpdec2 libmpfr6 libmpx2 libmumps-5.1.2 libmumps-dev libncurses6 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libparpack2 libparpack2-dev libpciaccess0 libperl5.28 libpetsc-real3.10 libpetsc-real3.10-dev libpetsc3.10-dev-common libpmix2 libprocps7 libpsl5 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libptscotch-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libquadmath0 librbio2 librdmacm1 libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.0 libscotch-6.0 libscotch-dev libsigsegv2 libslepc-real3.10 libslepc-real3.10-dev libspqr2 libsqlite3-0 libssh2-1 libssl-dev libssl1.1 libstdc++-8-dev libsuitesparse-dev libsuitesparseconfig5 libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist6 libsuperlu5 libsz2 libtsan0 libubsan1 libumfpack5 libuv1 libxml2 libxml2-dev linux-libc-dev lsb-base m4 mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client perl perl-modules-5.28 pkg-config procps pybind11-dev python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-dijitso python3-dolfin python3-ffc python3-fiat python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-petsc4py python3-petsc4py-real python3-pkg-resources python3-pkgconfig python3-ply python3-pybind11 python3-six python3-slepc4py python3-slepc4py-real python3-sympy python3-ufl python3.7 python3.7-minimal readline-common swig swig3.0 zlib1g-dev 0 upgraded, 260 newly installed, 0 to remove and 0 not upgraded. Need to get 200 MB of archives. After this operation, 1068 MB of additional disk space will be used. 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buster/main amd64 mime-support all 3.62 [37.2 kB] Get:12 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u4 [108 kB] Get:13 http://deb.debian.org/debian buster/main amd64 readline-common all 7.0-5 [70.6 kB] Get:14 http://deb.debian.org/debian buster/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:15 http://deb.debian.org/debian buster/main amd64 libsqlite3-0 amd64 3.27.2-3+deb10u1 [641 kB] Get:16 http://deb.debian.org/debian buster/main amd64 libpython2.7-stdlib amd64 2.7.16-2+deb10u1 [1912 kB] Get:17 http://deb.debian.org/debian buster/main amd64 python2.7 amd64 2.7.16-2+deb10u1 [305 kB] Get:18 http://deb.debian.org/debian buster/main amd64 libpython2-stdlib amd64 2.7.16-1 [20.8 kB] Get:19 http://deb.debian.org/debian buster/main amd64 libpython-stdlib amd64 2.7.16-1 [20.8 kB] Get:20 http://deb.debian.org/debian buster/main amd64 python2 amd64 2.7.16-1 [41.6 kB] Get:21 http://deb.debian.org/debian buster/main amd64 python amd64 2.7.16-1 [22.8 kB] Get:22 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http://deb.debian.org/debian buster/main amd64 libatomic1 amd64 8.3.0-6 [9032 B] Get:76 http://deb.debian.org/debian buster/main amd64 libasan5 amd64 8.3.0-6 [362 kB] Get:77 http://deb.debian.org/debian buster/main amd64 liblsan0 amd64 8.3.0-6 [131 kB] Get:78 http://deb.debian.org/debian buster/main amd64 libtsan0 amd64 8.3.0-6 [283 kB] Get:79 http://deb.debian.org/debian buster/main amd64 libubsan1 amd64 8.3.0-6 [120 kB] Get:80 http://deb.debian.org/debian buster/main amd64 libmpx2 amd64 8.3.0-6 [11.4 kB] Get:81 http://deb.debian.org/debian buster/main amd64 libquadmath0 amd64 8.3.0-6 [133 kB] Get:82 http://deb.debian.org/debian buster/main amd64 libgcc-8-dev amd64 8.3.0-6 [2298 kB] Get:83 http://deb.debian.org/debian buster/main amd64 libc-dev-bin amd64 2.28-10+deb10u1 [276 kB] Get:84 http://deb.debian.org/debian buster/main amd64 linux-libc-dev amd64 4.19.249-2 [1530 kB] Get:85 http://deb.debian.org/debian buster/main amd64 libc6-dev amd64 2.28-10+deb10u1 [2692 kB] Get:86 http://deb.debian.org/debian buster/main amd64 libstdc++-8-dev amd64 8.3.0-6 [1532 kB] Get:87 http://deb.debian.org/debian buster/main amd64 libboost1.67-dev amd64 1.67.0-13+deb10u1 [8388 kB] Get:88 http://deb.debian.org/debian buster/main amd64 libboost-system1.67.0 amd64 1.67.0-13+deb10u1 [229 kB] Get:89 http://deb.debian.org/debian buster/main amd64 libboost-chrono1.67.0 amd64 1.67.0-13+deb10u1 [234 kB] Get:90 http://deb.debian.org/debian buster/main amd64 libboost-chrono1.67-dev amd64 1.67.0-13+deb10u1 [236 kB] Get:91 http://deb.debian.org/debian buster/main amd64 libboost-chrono-dev amd64 1.67.0.1 [4268 B] Get:92 http://deb.debian.org/debian buster/main amd64 libboost-dev amd64 1.67.0.1 [3864 B] Get:93 http://deb.debian.org/debian buster/main amd64 libboost-filesystem1.67.0 amd64 1.67.0-13+deb10u1 [261 kB] Get:94 http://deb.debian.org/debian buster/main amd64 libboost-system1.67-dev amd64 1.67.0-13+deb10u1 [231 kB] Get:95 http://deb.debian.org/debian buster/main amd64 libboost-filesystem1.67-dev amd64 1.67.0-13+deb10u1 [269 kB] Get:96 http://deb.debian.org/debian buster/main amd64 libboost-filesystem-dev amd64 1.67.0.1 [3684 B] Get:97 http://deb.debian.org/debian buster/main amd64 libboost-regex1.67.0 amd64 1.67.0-13+deb10u1 [485 kB] Get:98 http://deb.debian.org/debian buster/main amd64 libglib2.0-0 amd64 2.58.3-2+deb10u3 [1259 kB] Get:99 http://deb.debian.org/debian buster/main amd64 libdpkg-perl all 1.19.8 [1415 kB] Get:100 http://deb.debian.org/debian buster/main amd64 pkg-config amd64 0.29-6 [63.5 kB] Get:101 http://deb.debian.org/debian buster/main amd64 icu-devtools amd64 63.1-6+deb10u3 [189 kB] Get:102 http://deb.debian.org/debian buster/main amd64 libicu-dev amd64 63.1-6+deb10u3 [9183 kB] Get:103 http://deb.debian.org/debian buster/main amd64 libboost-regex1.67-dev amd64 1.67.0-13+deb10u1 [539 kB] Get:104 http://deb.debian.org/debian buster/main amd64 libboost-iostreams1.67.0 amd64 1.67.0-13+deb10u1 [249 kB] Get:105 http://deb.debian.org/debian buster/main amd64 libboost-iostreams1.67-dev amd64 1.67.0-13+deb10u1 [255 kB] Get:106 http://deb.debian.org/debian buster/main amd64 libboost-iostreams-dev amd64 1.67.0.1 [3632 B] Get:107 http://deb.debian.org/debian buster/main amd64 libboost-math1.67.0 amd64 1.67.0-13+deb10u1 [460 kB] Get:108 http://deb.debian.org/debian buster/main amd64 libboost-math1.67-dev amd64 1.67.0-13+deb10u1 [745 kB] Get:109 http://deb.debian.org/debian buster/main amd64 libboost-math-dev amd64 1.67.0.1 [3848 B] Get:110 http://deb.debian.org/debian buster/main amd64 libboost-serialization1.67.0 amd64 1.67.0-13+deb10u1 [319 kB] Get:111 http://deb.debian.org/debian buster/main amd64 libboost-serialization1.67-dev amd64 1.67.0-13+deb10u1 [359 kB] Get:112 http://deb.debian.org/debian buster/main amd64 libevent-2.1-6 amd64 2.1.8-stable-4 [177 kB] Get:113 http://deb.debian.org/debian buster/main amd64 libevent-core-2.1-6 amd64 2.1.8-stable-4 [129 kB] Get:114 http://deb.debian.org/debian buster/main amd64 libevent-pthreads-2.1-6 amd64 2.1.8-stable-4 [47.9 kB] Get:115 http://deb.debian.org/debian buster/main amd64 libnl-3-200 amd64 3.4.0-1 [63.0 kB] Get:116 http://deb.debian.org/debian buster/main amd64 libnl-route-3-200 amd64 3.4.0-1 [162 kB] Get:117 http://deb.debian.org/debian buster/main amd64 libibverbs1 amd64 22.1-1 [51.2 kB] Get:118 http://deb.debian.org/debian buster/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6 [168 kB] Get:119 http://deb.debian.org/debian buster/main amd64 libnuma1 amd64 2.0.12-1 [26.2 kB] Get:120 http://deb.debian.org/debian buster/main amd64 libpsm2-2 amd64 11.2.78-1 [177 kB] Get:121 http://deb.debian.org/debian buster/main amd64 librdmacm1 amd64 22.1-1 [65.3 kB] Get:122 http://deb.debian.org/debian buster/main amd64 libfabric1 amd64 1.6.2-3 [396 kB] Get:123 http://deb.debian.org/debian buster/main amd64 libgfortran5 amd64 8.3.0-6 [581 kB] Get:124 http://deb.debian.org/debian buster/main amd64 libltdl7 amd64 2.4.6-9 [390 kB] Get:125 http://deb.debian.org/debian buster/main amd64 libhwloc5 amd64 1.11.12-3 [111 kB] Get:126 http://deb.debian.org/debian buster/main amd64 libpciaccess0 amd64 0.14-1 [53.5 kB] Get:127 http://deb.debian.org/debian buster/main amd64 ocl-icd-libopencl1 amd64 2.2.12-2 [37.5 kB] Get:128 http://deb.debian.org/debian buster/main amd64 libhwloc-plugins amd64 1.11.12-3 [17.4 kB] Get:129 http://deb.debian.org/debian buster/main amd64 libpmix2 amd64 3.1.2-3 [498 kB] Get:130 http://deb.debian.org/debian buster/main amd64 libopenmpi3 amd64 3.1.3-11 [2191 kB] Get:131 http://deb.debian.org/debian buster/main amd64 libboost-mpi1.67.0 amd64 1.67.0-13+deb10u1 [272 kB] Get:132 http://deb.debian.org/debian buster/main amd64 openmpi-common all 3.1.3-11 [165 kB] Get:133 http://deb.debian.org/debian buster/main amd64 ibverbs-providers amd64 22.1-1 [187 kB] Get:134 http://deb.debian.org/debian buster/main amd64 libnl-3-dev amd64 3.4.0-1 [102 kB] Get:135 http://deb.debian.org/debian buster/main amd64 libnl-route-3-dev amd64 3.4.0-1 [177 kB] Get:136 http://deb.debian.org/debian buster/main amd64 libibverbs-dev amd64 22.1-1 [362 kB] Get:137 http://deb.debian.org/debian buster/main amd64 libnuma-dev amd64 2.0.12-1 [39.2 kB] Get:138 http://deb.debian.org/debian buster/main amd64 libltdl-dev amd64 2.4.6-9 [162 kB] Get:139 http://deb.debian.org/debian buster/main amd64 libhwloc-dev amd64 1.11.12-3 [175 kB] Get:140 http://deb.debian.org/debian buster/main amd64 openmpi-bin amd64 3.1.3-11 [200 kB] Get:141 http://deb.debian.org/debian buster/main amd64 libopenmpi-dev amd64 3.1.3-11 [974 kB] Get:142 http://deb.debian.org/debian buster/main amd64 mpi-default-dev amd64 1.13 [5476 B] Get:143 http://deb.debian.org/debian buster/main amd64 libboost-mpi1.67-dev amd64 1.67.0-13+deb10u1 [380 kB] Get:144 http://deb.debian.org/debian buster/main amd64 libboost-mpi-dev amd64 1.67.0.1 [3732 B] Get:145 http://deb.debian.org/debian buster/main amd64 libboost-program-options1.67.0 amd64 1.67.0-13+deb10u1 [357 kB] Get:146 http://deb.debian.org/debian buster/main amd64 libboost-program-options1.67-dev amd64 1.67.0-13+deb10u1 [385 kB] Get:147 http://deb.debian.org/debian buster/main amd64 libboost-program-options-dev amd64 1.67.0.1 [3656 B] Get:148 http://deb.debian.org/debian buster/main amd64 libboost-serialization-dev amd64 1.67.0.1 [3876 B] Get:149 http://deb.debian.org/debian buster/main amd64 libboost-atomic1.67.0 amd64 1.67.0-13+deb10u1 [226 kB] Get:150 http://deb.debian.org/debian buster/main amd64 libboost-atomic1.67-dev amd64 1.67.0-13+deb10u1 [225 kB] Get:151 http://deb.debian.org/debian buster/main amd64 libboost-date-time1.67.0 amd64 1.67.0-13+deb10u1 [239 kB] Get:152 http://deb.debian.org/debian buster/main amd64 libboost-date-time1.67-dev amd64 1.67.0-13+deb10u1 [248 kB] Get:153 http://deb.debian.org/debian buster/main amd64 libboost-thread1.67.0 amd64 1.67.0-13+deb10u1 [268 kB] Get:154 http://deb.debian.org/debian buster/main amd64 libboost-thread1.67-dev amd64 1.67.0-13+deb10u1 [270 kB] Get:155 http://deb.debian.org/debian buster/main amd64 libboost-thread-dev amd64 1.67.0.1 [3672 B] Get:156 http://deb.debian.org/debian buster/main amd64 libboost-timer1.67.0 amd64 1.67.0-13+deb10u1 [231 kB] Get:157 http://deb.debian.org/debian buster/main amd64 libboost-timer1.67-dev amd64 1.67.0-13+deb10u1 [231 kB] Get:158 http://deb.debian.org/debian buster/main amd64 libboost-timer-dev amd64 1.67.0.1 [3772 B] Get:159 http://deb.debian.org/debian buster/main amd64 libsuitesparseconfig5 amd64 1:5.4.0+dfsg-1 [20.9 kB] Get:160 http://deb.debian.org/debian buster/main amd64 libamd2 amd64 1:5.4.0+dfsg-1 [33.4 kB] Get:161 http://deb.debian.org/debian buster/main amd64 libblas3 amd64 3.8.0-2 [148 kB] Get:162 http://deb.debian.org/debian buster/main amd64 libcamd2 amd64 1:5.4.0+dfsg-1 [35.0 kB] Get:163 http://deb.debian.org/debian buster/main amd64 libccolamd2 amd64 1:5.4.0+dfsg-1 [36.4 kB] Get:164 http://deb.debian.org/debian buster/main amd64 libcolamd2 amd64 1:5.4.0+dfsg-1 [30.3 kB] Get:165 http://deb.debian.org/debian buster/main amd64 liblapack3 amd64 3.8.0-2 [2110 kB] Get:166 http://deb.debian.org/debian buster/main amd64 libmetis5 amd64 5.1.0.dfsg-5+b2 [175 kB] Get:167 http://deb.debian.org/debian buster/main amd64 libcholmod3 amd64 1:5.4.0+dfsg-1 [324 kB] Get:168 http://deb.debian.org/debian buster/main amd64 libaec0 amd64 1.0.2-1 [20.1 kB] Get:169 http://deb.debian.org/debian buster/main amd64 libsz2 amd64 1.0.2-1 [6676 B] Get:170 http://deb.debian.org/debian buster/main amd64 libhdf5-openmpi-103 amd64 1.10.4+repack-10 [1373 kB] Get:171 http://deb.debian.org/debian buster/main amd64 libfftw3-double3 amd64 3.3.8-2 [733 kB] Get:172 http://deb.debian.org/debian buster/main amd64 libfftw3-long3 amd64 3.3.8-2 [319 kB] Get:173 http://deb.debian.org/debian buster/main amd64 libfftw3-single3 amd64 3.3.8-2 [762 kB] Get:174 http://deb.debian.org/debian buster/main amd64 libfftw3-mpi3 amd64 3.3.8-2 [66.4 kB] Get:175 http://deb.debian.org/debian buster/main amd64 libcombblas1.16.0 amd64 1.6.2-3 [283 kB] Get:176 http://deb.debian.org/debian buster/main amd64 libsuperlu-dist6 amd64 6.1.1+dfsg1-1 [404 kB] Get:177 http://deb.debian.org/debian buster/main amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [161 kB] Get:178 http://deb.debian.org/debian buster/main amd64 libhypre-2.15.1 amd64 2.15.1-5 [1826 kB] Get:179 http://deb.debian.org/debian buster/main amd64 libbtf1 amd64 1:5.4.0+dfsg-1 [22.7 kB] Get:180 http://deb.debian.org/debian buster/main amd64 libklu1 amd64 1:5.4.0+dfsg-1 [85.3 kB] Get:181 http://deb.debian.org/debian buster/main amd64 mpi-default-bin amd64 1.13 [4672 B] Get:182 http://deb.debian.org/debian buster/main amd64 libscalapack-openmpi2.0 amd64 2.0.2-7+b2 [1467 kB] Get:183 http://deb.debian.org/debian buster/main amd64 libmumps-5.1.2 amd64 5.1.2-4+b2 [1125 kB] Get:184 http://deb.debian.org/debian buster/main amd64 libscotch-6.0 amd64 6.0.6-2 [422 kB] Get:185 http://deb.debian.org/debian buster/main amd64 libptscotch-6.0 amd64 6.0.6-2 [660 kB] Get:186 http://deb.debian.org/debian buster/main amd64 libumfpack5 amd64 1:5.4.0+dfsg-1 [243 kB] Get:187 http://deb.debian.org/debian buster/main amd64 libpetsc-real3.10 amd64 3.10.3+dfsg1-5 [4979 kB] Get:188 http://deb.debian.org/debian buster/main amd64 libarpack2 amd64 3.7.0-2 [102 kB] Get:189 http://deb.debian.org/debian buster/main amd64 libparpack2 amd64 3.7.0-2 [98.3 kB] Get:190 http://deb.debian.org/debian buster/main amd64 libslepc-real3.10 amd64 3.10.1+dfsg1-3 [888 kB] Get:191 http://deb.debian.org/debian buster/main amd64 libdolfin2018.1 amd64 2018.1.0.post1-16 [1736 kB] Get:192 http://deb.debian.org/debian buster/main amd64 libeigen3-dev all 3.3.7-1 [850 kB] Get:193 http://deb.debian.org/debian buster/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-1+deb10u1 [210 kB] Get:194 http://deb.debian.org/debian buster/main amd64 libaec-dev amd64 1.0.2-1 [18.4 kB] Get:195 http://deb.debian.org/debian buster/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+deb10u1 [133 kB] Get:196 http://deb.debian.org/debian buster/main amd64 libjpeg62-turbo-dev amd64 1:1.5.2-2+deb10u1 [208 kB] Get:197 http://deb.debian.org/debian buster/main amd64 libjpeg-dev all 1:1.5.2-2+deb10u1 [57.7 kB] Get:198 http://deb.debian.org/debian buster/main amd64 libhdf5-openmpi-dev amd64 1.10.4+repack-10 [2513 kB] Get:199 http://deb.debian.org/debian buster/main amd64 libhdf5-mpi-dev amd64 1.10.4+repack-10 [27.3 kB] Get:200 http://deb.debian.org/debian buster/main amd64 libcxsparse3 amd64 1:5.4.0+dfsg-1 [75.7 kB] Get:201 http://deb.debian.org/debian buster/main amd64 libgraphblas2 amd64 1:5.4.0+dfsg-1 [1664 kB] Get:202 http://deb.debian.org/debian buster/main amd64 libldl2 amd64 1:5.4.0+dfsg-1 [22.1 kB] Get:203 http://deb.debian.org/debian buster/main amd64 libmongoose2 amd64 1:5.4.0+dfsg-1 [44.7 kB] Get:204 http://deb.debian.org/debian buster/main amd64 librbio2 amd64 1:5.4.0+dfsg-1 [37.8 kB] Get:205 http://deb.debian.org/debian buster/main amd64 libspqr2 amd64 1:5.4.0+dfsg-1 [78.6 kB] Get:206 http://deb.debian.org/debian buster/main amd64 libblas-dev amd64 3.8.0-2 [154 kB] Get:207 http://deb.debian.org/debian buster/main amd64 liblapack-dev amd64 3.8.0-2 [2140 kB] Get:208 http://deb.debian.org/debian buster/main amd64 libsuitesparse-dev amd64 1:5.4.0+dfsg-1 [2448 kB] Get:209 http://deb.debian.org/debian buster/main amd64 libscotch-dev amd64 6.0.6-2 [2941 kB] Get:210 http://deb.debian.org/debian buster/main amd64 libxml2-dev amd64 2.9.4+dfsg1-7+deb10u4 [785 kB] Get:211 http://deb.debian.org/debian buster/main amd64 python3-pkg-resources all 40.8.0-1 [153 kB] Get:212 http://deb.debian.org/debian buster/main amd64 python3-numpy amd64 1:1.16.2-1 [2119 kB] Get:213 http://deb.debian.org/debian buster/main amd64 python3-mpmath all 1.1.0-1 [416 kB] Get:214 http://deb.debian.org/debian buster/main amd64 python3-sympy all 1.3-2 [3500 kB] Get:215 http://deb.debian.org/debian buster/main amd64 python3-fiat all 2018.1.0-5 [55.9 kB] Get:216 http://deb.debian.org/debian buster/main amd64 python3-ufl all 2018.1.0-5 [162 kB] Get:217 http://deb.debian.org/debian buster/main amd64 python3-mpi4py amd64 2.0.0-3+b3 [425 kB] Get:218 http://deb.debian.org/debian buster/main amd64 python3-dijitso all 2018.1.1~git1-1 [24.7 kB] Get:219 http://deb.debian.org/debian buster/main amd64 python3-ffc all 2018.1.0-5 [233 kB] Get:220 http://deb.debian.org/debian buster/main amd64 libjs-jquery all 3.3.1~dfsg-3+deb10u1 [332 kB] Get:221 http://deb.debian.org/debian buster/main amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:222 http://deb.debian.org/debian buster/main amd64 fonts-mathjax all 2.7.4+dfsg-1 [2209 kB] Get:223 http://deb.debian.org/debian buster/main amd64 libjs-mathjax all 2.7.4+dfsg-1 [5658 kB] Get:224 http://deb.debian.org/debian buster/main amd64 libpetsc3.10-dev-common all 3.10.3+dfsg1-5 [178 kB] Get:225 http://deb.debian.org/debian buster/main amd64 libsuperlu-dev amd64 5.2.1+dfsg1-4 [18.4 kB] Get:226 http://deb.debian.org/debian buster/main amd64 libhypre-dev amd64 2.15.1-5 [171 kB] Get:227 http://deb.debian.org/debian buster/main amd64 libptscotch-dev amd64 6.0.6-2 [6547 kB] Get:228 http://deb.debian.org/debian buster/main amd64 libscalapack-openmpi-dev amd64 2.0.2-7+b2 [12.9 kB] Get:229 http://deb.debian.org/debian buster/main amd64 libscalapack-mpi-dev amd64 2.0.2-7+b2 [8884 B] Get:230 http://deb.debian.org/debian buster/main amd64 libmumps-dev amd64 5.1.2-4+b2 [1004 kB] Get:231 http://deb.debian.org/debian buster/main amd64 libfftw3-quad3 amd64 3.3.8-2 [558 kB] Get:232 http://deb.debian.org/debian buster/main amd64 libfftw3-bin amd64 3.3.8-2 [50.7 kB] Get:233 http://deb.debian.org/debian buster/main amd64 libfftw3-dev amd64 3.3.8-2 [2106 kB] Get:234 http://deb.debian.org/debian buster/main amd64 libfftw3-mpi-dev amd64 3.3.8-2 [66.6 kB] Get:235 http://deb.debian.org/debian buster/main amd64 libssl-dev amd64 1.1.1n-0+deb10u3 [1808 kB] Get:236 http://deb.debian.org/debian buster/main amd64 libcc1-0 amd64 8.3.0-6 [46.6 kB] Get:237 http://deb.debian.org/debian buster/main amd64 gcc-8 amd64 8.3.0-6 [9452 kB] Get:238 http://deb.debian.org/debian buster/main amd64 gcc amd64 4:8.3.0-1 [5196 B] Get:239 http://deb.debian.org/debian buster/main amd64 libgfortran-8-dev amd64 8.3.0-6 [616 kB] Get:240 http://deb.debian.org/debian buster/main amd64 gfortran-8 amd64 8.3.0-6 [9375 kB] Get:241 http://deb.debian.org/debian buster/main amd64 gfortran amd64 4:8.3.0-1 [1432 B] Get:242 http://deb.debian.org/debian buster/main amd64 libsuperlu-dist-dev amd64 6.1.1+dfsg1-1 [251 kB] Get:243 http://deb.debian.org/debian buster/main amd64 libpetsc-real3.10-dev amd64 3.10.3+dfsg1-5 [5833 kB] Get:244 http://deb.debian.org/debian buster/main amd64 libarpack2-dev amd64 3.7.0-2 [110 kB] Get:245 http://deb.debian.org/debian buster/main amd64 libparpack2-dev amd64 3.7.0-2 [106 kB] Get:246 http://deb.debian.org/debian buster/main amd64 libslepc-real3.10-dev amd64 3.10.1+dfsg1-3 [4226 kB] Get:247 http://deb.debian.org/debian buster/main amd64 libdolfin-dev amd64 2018.1.0.post1-16 [228 kB] Get:248 http://deb.debian.org/debian buster/main amd64 python3-ply all 3.11-3 [65.1 kB] Get:249 http://deb.debian.org/debian buster/main amd64 pybind11-dev all 2.2.4-2 [130 kB] Get:250 http://deb.debian.org/debian buster/main amd64 python3-pybind11 all 2.2.4-2 [22.3 kB] Get:251 http://deb.debian.org/debian buster/main amd64 python3-six all 1.12.0-1 [15.7 kB] Get:252 http://deb.debian.org/debian buster/main amd64 swig3.0 amd64 3.0.12-2 [1397 kB] Get:253 http://deb.debian.org/debian buster/main amd64 swig amd64 3.0.12-2 [310 kB] Get:254 http://deb.debian.org/debian buster/main amd64 python3-petsc4py-real amd64 3.10.1-1 [832 kB] Get:255 http://deb.debian.org/debian buster/main amd64 python3-petsc4py all 3.10.1-1 [9344 B] Get:256 http://deb.debian.org/debian buster/main amd64 python3-slepc4py-real amd64 3.10.0-2 [218 kB] Get:257 http://deb.debian.org/debian buster/main amd64 python3-slepc4py all 3.10.0-2 [5228 B] Get:258 http://deb.debian.org/debian buster/main amd64 python3-pkgconfig all 1.4.0-1 [6424 B] Get:259 http://deb.debian.org/debian buster/main amd64 python3-dolfin amd64 2018.1.0.post1-16 [787 kB] Get:260 http://deb.debian.org/debian buster/main amd64 dolfin-doc all 2018.1.0.post1-16 [4135 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 200 MB in 6s (33.1 MB/s) Selecting previously unselected package perl-modules-5.28. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6465 files and directories currently installed.) Preparing to unpack .../00-perl-modules-5.28_5.28.1-6+deb10u1_all.deb ... Unpacking perl-modules-5.28 (5.28.1-6+deb10u1) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../01-libgdbm6_1.18.1-4_amd64.deb ... Unpacking libgdbm6:amd64 (1.18.1-4) ... Selecting previously unselected package libgdbm-compat4:amd64. 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Setting up libpython2.7-stdlib:amd64 (2.7.16-2+deb10u1) ... Setting up libcamd2:amd64 (1:5.4.0+dfsg-1) ... Setting up libmongoose2:amd64 (1:5.4.0+dfsg-1) ... Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up libfftw3-quad3:amd64 (3.3.8-2) ... Setting up libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... Setting up libgdbm-compat4:amd64 (1.18.1-4) ... Setting up libgcc-8-dev:amd64 (8.3.0-6) ... Setting up libperl5.28:amd64 (5.28.1-6+deb10u1) ... Setting up libnl-3-dev:amd64 (3.4.0-1) ... Setting up libklu1:amd64 (1:5.4.0+dfsg-1) ... Setting up libccolamd2:amd64 (1:5.4.0+dfsg-1) ... Setting up cpp (4:8.3.0-1) ... Setting up libboost-timer1.67.0:amd64 (1.67.0-13+deb10u1) ... Setting up libcurl4:amd64 (7.64.0-4+deb10u2) ... Setting up libc6-dev:amd64 (2.28-10+deb10u1) ... Setting up libboost-filesystem1.67.0:amd64 (1.67.0-13+deb10u1) ... Setting up libcxsparse3:amd64 (1:5.4.0+dfsg-1) ... Setting up libblas-dev:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libpython3-stdlib:amd64 (3.7.3-1) ... Setting up libstdc++-8-dev:amd64 (8.3.0-6) ... Setting up libboost1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up libboost-atomic1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up libboost-serialization1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up libgfortran-8-dev:amd64 (8.3.0-6) ... Setting up python3.7 (3.7.3-2+deb10u3) ... Setting up libibverbs1:amd64 (22.1-1) ... Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libboost-math1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up gcc-8 (8.3.0-6) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libpmix2:amd64 (3.1.2-3) ... Setting up ibverbs-providers:amd64 (22.1-1) ... Setting up libpython2-stdlib:amd64 (2.7.16-1) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up libboost-program-options1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up openssh-client (1:7.9p1-10+deb10u2) ... Setting up gfortran-8 (8.3.0-6) ... Setting up libboost-math-dev:amd64 (1.67.0.1) ... Setting up libarpack2:amd64 (3.7.0-2) ... Setting up libsuperlu5:amd64 (5.2.1+dfsg1-4) ... Setting up python3 (3.7.3-1) ... Setting up python2 (2.7.16-1) ... Setting up gcc (4:8.3.0-1) ... Setting up libnuma-dev:amd64 (2.0.12-1) ... Setting up python3-six (1.12.0-1) ... Setting up libnl-route-3-dev:amd64 (3.4.0-1) ... Setting up libpython-stdlib:amd64 (2.7.16-1) ... Setting up libboost-date-time1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up perl (5.28.1-6+deb10u1) ... Setting up libboost-chrono1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up libboost-program-options-dev:amd64 (1.67.0.1) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.5.2-2+deb10u1) ... Setting up liblapack-dev:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libboost-serialization-dev:amd64 (1.67.0.1) ... Setting up libdpkg-perl (1.19.8) ... Setting up autoconf (2.69-11) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-1+deb10u1) ... Setting up libboost-timer1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up cmake (3.13.4-1) ... Setting up libboost-system1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up libboost-dev:amd64 (1.67.0.1) ... Setting up python3-mpmath (1.1.0-1) ... Setting up libsuperlu-dev:amd64 (5.2.1+dfsg1-4) ... Setting up python (2.7.16-1) ... Setting up libfftw3-dev:amd64 (3.3.8-2) ... Setting up libcholmod3:amd64 (1:5.4.0+dfsg-1) ... Setting up libboost-timer-dev:amd64 (1.67.0.1) ... Setting up python3-pybind11 (2.2.4-2) ... Setting up python3-pkg-resources (40.8.0-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3-sympy (1.3-2) ... Setting up librdmacm1:amd64 (22.1-1) ... Setting up libspqr2:amd64 (1:5.4.0+dfsg-1) ... Setting up libarpack2-dev:amd64 (3.7.0-2) ... Setting up libboost-filesystem1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up libboost-thread1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up libboost-chrono-dev:amd64 (1.67.0.1) ... Setting up python3-ply (3.11-3) ... Setting up libjpeg-dev (1:1.5.2-2+deb10u1) ... Setting up libibverbs-dev:amd64 (22.1-1) ... Setting up gfortran (4:8.3.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libltdl-dev:amd64 (2.4.6-9) ... Setting up libpetsc3.10-dev-common (3.10.3+dfsg1-5) ... Setting up libumfpack5:amd64 (1:5.4.0+dfsg-1) ... Setting up pkg-config (0.29-6) ... Setting up python3-numpy (1:1.16.2-1) ... Setting up libhwloc-dev:amd64 (1.11.12-3) ... Setting up python3-pkgconfig (1.4.0-1) ... Setting up libboost-filesystem-dev:amd64 (1.67.0.1) ... Setting up libboost-thread-dev:amd64 (1.67.0.1) ... Setting up libfabric1 (1.6.2-3) ... Setting up python3-fiat (2018.1.0-5) ... Setting up python3-ufl (2018.1.0-5) ... Setting up libsuitesparse-dev:amd64 (1:5.4.0+dfsg-1) ... Setting up libopenmpi3:amd64 (3.1.3-11) ... Setting up libboost-mpi1.67.0 (1.67.0-13+deb10u1) ... Setting up libfftw3-mpi3:amd64 (3.3.8-2) ... Setting up python3-mpi4py (2.0.0-3+b3) ... Setting up libhdf5-openmpi-103:amd64 (1.10.4+repack-10) ... Setting up libeigen3-dev (3.3.7-1) ... Setting up icu-devtools (63.1-6+deb10u3) ... Setting up libicu-dev:amd64 (63.1-6+deb10u3) ... Setting up libscotch-6.0 (6.0.6-2) ... Setting up openmpi-bin (3.1.3-11) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libparpack2:amd64 (3.7.0-2) ... Setting up libcombblas1.16.0:amd64 (1.6.2-3) ... Setting up python3-dijitso (2018.1.1~git1-1) ... Setting up libboost-regex1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up python3-ffc (2018.1.0-5) ... update-alternatives: using /usr/lib/python3/dist-packages/ffc/backends/ufc/ufc.h to provide /usr/include/ufc.h (ufc.h) in auto mode Setting up libfftw3-mpi-dev:amd64 (3.3.8-2) ... Setting up mpi-default-bin (1.13) ... Setting up libptscotch-6.0 (6.0.6-2) ... Setting up libxml2-dev:amd64 (2.9.4+dfsg1-7+deb10u4) ... Setting up libsuperlu-dist6:amd64 (6.1.1+dfsg1-1) ... Setting up libopenmpi-dev:amd64 (3.1.3-11) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libhdf5-openmpi-dev (1.10.4+repack-10) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libboost-iostreams1.67-dev:amd64 (1.67.0-13+deb10u1) ... Setting up libscalapack-openmpi2.0 (2.0.2-7+b2) ... Setting up libhypre-2.15.1:amd64 (2.15.1-5) ... Setting up libboost-iostreams-dev:amd64 (1.67.0.1) ... Setting up libsuperlu-dist-dev:amd64 (6.1.1+dfsg1-1) ... Setting up libmumps-5.1.2:amd64 (5.1.2-4+b2) ... Setting up libscalapack-openmpi-dev (2.0.2-7+b2) ... Setting up mpi-default-dev (1.13) ... Setting up libscalapack-mpi-dev (2.0.2-7+b2) ... Setting up libpetsc-real3.10:amd64 (3.10.3+dfsg1-5) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.10.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.10 (libpetsc.so.3.10) in auto mode Setting up libslepc-real3.10 (3.10.1+dfsg1-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.10.1 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.10 (libslepc.so.3.10) in auto mode Setting up libdolfin2018.1:amd64 (2018.1.0.post1-16) ... Setting up libmumps-dev:amd64 (5.1.2-4+b2) ... Setting up libscotch-dev (6.0.6-2) ... Setting up libparpack2-dev:amd64 (3.7.0-2) ... Setting up python3-petsc4py-real (3.10.1-1) ... update-alternatives: using /usr/lib/python3/dist-packages/petsc4py_real to provide /usr/lib/python3/dist-packages/petsc4py (petsc4py) in auto mode Setting up libboost-mpi1.67-dev (1.67.0-13+deb10u1) ... Setting up libhypre-dev:amd64 (2.15.1-5) ... Setting up libptscotch-dev (6.0.6-2) ... Setting up libboost-mpi-dev (1.67.0.1) ... Setting up libhdf5-mpi-dev (1.10.4+repack-10) ... Setting up libpetsc-real3.10-dev:amd64 (3.10.3+dfsg1-5) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.10.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.10 (petsc3.10) in auto mode Setting up libslepc-real3.10-dev (3.10.1+dfsg1-3) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.10.1 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.10 (slepc3.10) in auto mode Setting up python3-petsc4py (3.10.1-1) ... Setting up libdolfin-dev (2018.1.0.post1-16) ... Setting up python3-slepc4py-real (3.10.0-2) ... update-alternatives: using /usr/lib/python3/dist-packages/slepc4py_real to provide /usr/lib/python3/dist-packages/slepc4py (slepc4py) in auto mode Setting up python3-slepc4py (3.10.0-2) ... Setting up python3-dolfin (2018.1.0.post1-16) ... Setting up dolfin-doc (2018.1.0.post1-16) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... 1m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', '-y', 'install', 'dolfin-doc=2018.1.0.post1-16'] 1m5.9s INFO: Running scripts post_install 1m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_install_exceptions'] 1m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_install_exceptions'] 1m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_install_log_alternatives'] 1m5.9s DUMP: Removing 'local diversion of /usr/bin/update-alternatives to /usr/bin/update-alternatives.orig' LOG-ALTERNATIVES: dpkg=python: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --auto /usr/bin/python LOG-ALTERNATIVES: dpkg=python: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --remove python /usr/bin/python1.5 LOG-ALTERNATIVES: dpkg=python: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --remove python /usr/bin/python2.1 LOG-ALTERNATIVES: dpkg=python: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --remove python /usr/bin/python2.2 LOG-ALTERNATIVES: dpkg=python3: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --auto /usr/bin/python3 LOG-ALTERNATIVES: dpkg=openmpi-bin: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --query mpirun-x86_64-linux-gnu LOG-ALTERNATIVES: dpkg=openmpi-bin: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --query mpi LOG-ALTERNATIVES: dpkg=libopenmpi-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --query mpicc LOG-ALTERNATIVES: dpkg=libopenmpi-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --query mpiCC LOG-ALTERNATIVES: dpkg=libopenmpi-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --query mpi LOG-ALTERNATIVES: dpkg=procps: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/bin/w w /usr/bin/w.procps 50 --slave /usr/share/man/man1/w.1.gz w.1.gz /usr/share/man/man1/w.procps.1.gz LOG-ALTERNATIVES: dpkg=libpsm-infinipath1: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 libpsm_infinipath.so.1 /usr/lib/libpsm1/libpsm_infinipath.so.1.16 40 LOG-ALTERNATIVES: dpkg=libblas3: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/libblas.so.3 libblas.so.3-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 10 LOG-ALTERNATIVES: dpkg=cpp: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --quiet --install /lib/cpp cpp /usr/bin/cpp 10 LOG-ALTERNATIVES: dpkg=libblas-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/libblas.so libblas.so-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/blas/libblas.so 10 --slave /usr/lib/x86_64-linux-gnu/libblas.a libblas.a-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/blas/libblas.a --slave /usr/include/x86_64-linux-gnu/cblas.h cblas.h-x86_64-linux-gnu /usr/include/x86_64-linux-gnu/cblas-netlib.h --slave /usr/lib/x86_64-linux-gnu/pkgconfig/blas.pc blas.pc-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/pkgconfig/blas-netlib.pc LOG-ALTERNATIVES: dpkg=liblapack3: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/liblapack.so.3 liblapack.so.3-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 10 LOG-ALTERNATIVES: dpkg=openssh-client: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --quiet --remove rlogin /usr/bin/ssh LOG-ALTERNATIVES: dpkg=openssh-client: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --quiet --remove rcp /usr/bin/ssh LOG-ALTERNATIVES: dpkg=openssh-client: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --display rsh LOG-ALTERNATIVES: dpkg=openssh-client: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --quiet --install /usr/bin/rsh rsh /usr/bin/ssh 20 --slave /usr/share/man/man1/rsh.1.gz rsh.1.gz /usr/share/man/man1/ssh.1.gz LOG-ALTERNATIVES: dpkg=openssh-client: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --display rlogin LOG-ALTERNATIVES: dpkg=openssh-client: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --quiet --install /usr/bin/rlogin rlogin /usr/bin/slogin 20 --slave /usr/share/man/man1/rlogin.1.gz rlogin.1.gz /usr/share/man/man1/slogin.1.gz LOG-ALTERNATIVES: dpkg=openssh-client: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --display rcp LOG-ALTERNATIVES: dpkg=openssh-client: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --quiet --install /usr/bin/rcp rcp /usr/bin/scp 20 --slave /usr/share/man/man1/rcp.1.gz rcp.1.gz /usr/share/man/man1/scp.1.gz LOG-ALTERNATIVES: dpkg=gcc: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --quiet --install /usr/bin/cc cc /usr/bin/gcc 20 LOG-ALTERNATIVES: dpkg=gcc: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --quiet --install /usr/bin/c89 c89 /usr/bin/c89-gcc 20 --slave /usr/share/man/man1/c89.1.gz c89.1.gz /usr/share/man/man1/c89-gcc.1.gz LOG-ALTERNATIVES: dpkg=gcc: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --quiet --install /usr/bin/c99 c99 /usr/bin/c99-gcc 20 --slave /usr/share/man/man1/c99.1.gz c99.1.gz /usr/share/man/man1/c99-gcc.1.gz LOG-ALTERNATIVES: dpkg=perl: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --remove rename /usr/bin/prename LOG-ALTERNATIVES: dpkg=liblapack-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/liblapack.so liblapack.so-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/lapack/liblapack.so 20 --slave /usr/lib/x86_64-linux-gnu/liblapack.a liblapack.a-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/lapack/liblapack.a --slave /usr/lib/x86_64-linux-gnu/pkgconfig/lapack.pc lapack.pc-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/pkgconfig/lapack-netlib.pc LOG-ALTERNATIVES: dpkg=automake: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/bin/automake automake /usr/bin/automake-1.16 34 --slave /usr/bin/aclocal aclocal /usr/bin/aclocal-1.16 --slave /usr/share/man/man1/automake.1.gz automake.1.gz /usr/share/man/man1/automake-1.16.1.gz --slave /usr/share/man/man1/aclocal.1.gz aclocal.1.gz /usr/share/man/man1/aclocal-1.16.1.gz LOG-ALTERNATIVES: dpkg=gfortran: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/bin/f95 f95 /usr/bin/gfortran 20 LOG-ALTERNATIVES: dpkg=gfortran: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/bin/f77 f77 /usr/bin/gfortran 20 LOG-ALTERNATIVES: dpkg=openmpi-bin: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/bin/mpirun mpirun /usr/bin/mpirun.openmpi 50 --slave /usr/share/man/man1/mpirun.1.gz mpirun.1.gz /usr/share/man/man1/mpirun.openmpi.1.gz --slave /usr/bin/mpiexec mpiexec /usr/bin/mpiexec.openmpi --slave /usr/share/man/man1/mpiexec.1.gz mpiexec.1.gz /usr/share/man/man1/mpiexec.openmpi.1.gz LOG-ALTERNATIVES: dpkg=openmpi-bin: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/bin/mpicc mpi /usr/bin/mpicc.openmpi 50 --slave /usr/bin/mpic++ mpic++ /usr/bin/mpic++.openmpi --slave /usr/bin/mpicxx mpicxx /usr/bin/mpic++.openmpi --slave /usr/bin/mpiCC mpiCC /usr/bin/mpic++.openmpi --slave /usr/bin/mpif77 mpif77 /usr/bin/mpif77.openmpi --slave /usr/bin/mpif90 mpif90 /usr/bin/mpif90.openmpi --slave /usr/bin/mpifort mpifort /usr/bin/mpifort.openmpi --slave /usr/share/man/man1/mpicc.1.gz mpicc.1.gz /usr/share/man/man1/mpicc.openmpi.1.gz --slave /usr/share/man/man1/mpic++.1.gz mpic++.1.gz /usr/share/man/man1/mpic++.openmpi.1.gz --slave /usr/share/man/man1/mpicxx.1.gz mpicxx.1.gz /usr/share/man/man1/mpicxx.openmpi.1.gz --slave /usr/share/man/man1/mpiCC.1.gz mpiCC.1.gz /usr/share/man/man1/mpiCC.openmpi.1.gz --slave /usr/share/man/man1/mpif77.1.gz mpif77.1.gz /usr/share/man/man1/mpif77.openmpi.1.gz --slave /usr/share/man/man1/mpif90.1.gz mpif90.1.gz /usr/share/man/man1/mpif90.openmpi.1.gz --slave /usr/share/man/man1/mpifort.1.gz mpifort.1.gz /usr/share/man/man1/mpifort.openmpi.1.gz LOG-ALTERNATIVES: dpkg=python3-ffc: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/include/ufc.h ufc.h /usr/lib/python3/dist-packages/ffc/backends/ufc/ufc.h 100 --slave /usr/include/ufc_geometry.h ufc_geometry.h /usr/lib/python3/dist-packages/ffc/backends/ufc/ufc_geometry.h LOG-ALTERNATIVES: dpkg=libopenmpi-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/include/x86_64-linux-gnu/mpi mpi-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/openmpi/include 50 --slave /usr/lib/x86_64-linux-gnu/libmpi.so libmpi.so-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so --slave /usr/lib/x86_64-linux-gnu/libmpi++.so libmpi++.so-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so --slave /usr/lib/x86_64-linux-gnu/pkgconfig/mpi.pc mpi.pc-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/pkgconfig/ompi.pc --slave /usr/lib/x86_64-linux-gnu/pkgconfig/mpi-fort.pc mpi-fort.pc-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/pkgconfig/ompi-fort.pc --slave /usr/lib/x86_64-linux-gnu/pkgconfig/mpi-c.pc mpi-c.pc-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/pkgconfig/ompi-c.pc --slave /usr/lib/x86_64-linux-gnu/pkgconfig/mpi-cxx.pc mpi-cxx.pc-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/pkgconfig/ompi-cxx.pc LOG-ALTERNATIVES: dpkg=libhdf5-openmpi-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/bin/h5pcc h5pcc /usr/bin/h5pcc.openmpi 50 --slave /usr/bin/h5pfc h5pfc /usr/bin/h5pfc.openmpi --slave /usr/share/man/man1/h5pcc.1.gz h5pcc.1.gz /usr/share/man/man1/h5pcc.openmpi.1.gz --slave /usr/share/man/man1/h5pfc.1.gz h5pfc.1.gz /usr/share/man/man1/h5pfc.openmpi.1.gz LOG-ALTERNATIVES: dpkg=libhdf5-openmpi-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc hdf5.pc /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc 50 LOG-ALTERNATIVES: dpkg=libpetsc-real3.10: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/libpetsc.so.3.10 libpetsc.so.3.10 /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.10.3 310377 LOG-ALTERNATIVES: dpkg=libslepc-real3.10: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/libslepc.so.3.10 libslepc.so.3.10 /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.10.1 310177 LOG-ALTERNATIVES: dpkg=python3-petsc4py-real: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/python3/dist-packages/petsc4py petsc4py /usr/lib/python3/dist-packages/petsc4py_real 310177 --slave /usr/lib/python3/dist-packages/petsc4py-3.10.1.egg-info petsc4py.egg-info /usr/lib/python3/dist-packages/petsc4py_real-3.10.1.egg-info LOG-ALTERNATIVES: dpkg=libpetsc-real3.10-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --query petsc LOG-ALTERNATIVES: dpkg=libpetsc-real3.10-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/petsc petsc /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real 310377 --slave /usr/lib/x86_64-linux-gnu/libpetsc.so libpetsc.so /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.10.3 --slave /usr/include/petsc petscinclude /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/include --slave /usr/lib/x86_64-linux-gnu/pkgconfig/PETSc.pc PETSc.pc /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/lib/pkgconfig/PETSc.pc --slave /usr/share/octave/site/m/petsc petsc-octave /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real/share/petsc/matlab LOG-ALTERNATIVES: dpkg=libpetsc-real3.10-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/libpetsc_real.so libpetsc_real.so /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.10.3 310377 --slave /usr/lib/petscdir/petsc-real petsc-real /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real LOG-ALTERNATIVES: dpkg=libpetsc-real3.10-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/petscdir/3.10 petsc3.10 /usr/lib/petscdir/petsc3.10/x86_64-linux-gnu-real 310377 LOG-ALTERNATIVES: dpkg=libslepc-real3.10-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --query slepc LOG-ALTERNATIVES: dpkg=libslepc-real3.10-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/slepc slepc /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real 310177 --slave /usr/lib/x86_64-linux-gnu/libslepc.so libslepc.so /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.10.1 --slave /usr/include/slepc slepcinclude /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/include --slave /usr/lib/x86_64-linux-gnu/pkgconfig/SLEPc.pc SLEPc.pc /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/lib/pkgconfig/SLEPc.pc LOG-ALTERNATIVES: dpkg=libslepc-real3.10-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/x86_64-linux-gnu/libslepc_real.so libslepc_real.so /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.10.1 310177 LOG-ALTERNATIVES: dpkg=libslepc-real3.10-dev: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/slepcdir/3.10 slepc3.10 /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real 310177 LOG-ALTERNATIVES: dpkg=python3-slepc4py-real: piuparts=dolfin-doc=2018.1.0.post1-16: /usr/bin/update-alternatives --install /usr/lib/python3/dist-packages/slepc4py slepc4py /usr/lib/python3/dist-packages/slepc4py_real 310077 --slave /usr/lib/python3/dist-packages/slepc4py-3.10.0.egg-info slepc4py.egg-info /usr/lib/python3/dist-packages/slepc4py_real-3.10.0.egg-info 1m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_install_log_alternatives'] 1m6.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 1m8.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 1m13.3s ERROR: WARN: Broken symlinks: /usr/share/petsc/3.10/share/petsc/examples -> ../../../../doc/libpetsc3.10-dev-examples/examples (libpetsc3.10-dev-common) /usr/share/petsc/3.10/share/petsc/datafiles -> ../../../../doc/libpetsc3.10-dev-examples/datafiles (libpetsc3.10-dev-common) /usr/lib/slepcdir/slepc3.10/x86_64-linux-gnu-real/share/slepc/datafiles -> ../../../../../../share/doc/libslepc3.10-dev-examples/datafiles (libslepc-real3.10-dev) 1m13.3s INFO: /bin converted to /usr/bin by /usr merge 1m13.4s INFO: /lib converted to /usr/lib by /usr merge 1m13.4s INFO: /lib/init converted to /usr/lib/init by /usr merge 1m13.4s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 1m13.4s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 1m13.4s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 1m13.4s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 1m13.4s INFO: /lib/terminfo converted to /usr/lib/terminfo by /usr merge 1m13.4s INFO: /lib/terminfo/E converted to /usr/lib/terminfo/E by /usr merge 1m13.4s INFO: /lib/terminfo/a converted to /usr/lib/terminfo/a by /usr merge 1m13.4s INFO: /lib/terminfo/c converted to /usr/lib/terminfo/c by /usr merge 1m13.4s INFO: /lib/terminfo/d converted to /usr/lib/terminfo/d by /usr merge 1m13.4s INFO: /lib/terminfo/h converted to /usr/lib/terminfo/h by /usr merge 1m13.4s INFO: /lib/terminfo/l converted to /usr/lib/terminfo/l by /usr merge 1m13.4s INFO: /lib/terminfo/m converted to /usr/lib/terminfo/m by /usr merge 1m13.4s INFO: /lib/terminfo/p converted to /usr/lib/terminfo/p by /usr merge 1m13.4s INFO: /lib/terminfo/r converted to /usr/lib/terminfo/r by /usr merge 1m13.4s INFO: /lib/terminfo/s converted to /usr/lib/terminfo/s by /usr merge 1m13.4s INFO: /lib/terminfo/v converted to /usr/lib/terminfo/v by /usr merge 1m13.4s INFO: /lib/terminfo/w converted to /usr/lib/terminfo/w by /usr merge 1m13.4s INFO: /lib/terminfo/x converted to /usr/lib/terminfo/x by /usr merge 1m13.4s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 1m13.4s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 1m13.4s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 1m13.4s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 1m13.4s INFO: /lib64 converted to /usr/lib64 by /usr merge 1m13.4s INFO: /sbin converted to /usr/sbin by /usr merge 1m16.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', '-ac', '--ignore-obsolete'] 1m20.7s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', '-ac', '--ignore-obsolete'] 1m20.7s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m20.7s DUMP: 0.15.6 1m20.7s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m20.7s INFO: Running adequate version 0.15.6 now. 1m20.7s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dolfin-doc'] 1m20.8s DUMP: dolfin-doc: py-file-not-bytecompiled /usr/share/dolfin/demo/documented/bcs/python/demo_bcs.py dolfin-doc: py-file-not-bytecompiled 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1m20.8s INFO: Running scripts pre_remove 1m20.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m21.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m21.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m21.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m21.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m38.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m38.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m38.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m38.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_exceptions'] 1m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/pre_remove_exceptions'] 1m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m38.5s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 1.8.2.3 install ok installed autoconf autoconf 2.69-11 install ok installed automake 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installed libboost-iostreams1.67-dev:amd64 libboost-iostreams1.67-dev 1.67.0-13+deb10u1 install ok installed libboost-iostreams1.67.0:amd64 libboost-iostreams1.67.0 1.67.0-13+deb10u1 install ok installed libboost-math-dev:amd64 libboost-math-dev 1.67.0.1 install ok installed libboost-math1.67-dev:amd64 libboost-math1.67-dev 1.67.0-13+deb10u1 install ok installed libboost-math1.67.0:amd64 libboost-math1.67.0 1.67.0-13+deb10u1 install ok installed libboost-mpi-dev libboost-mpi-dev 1.67.0.1 install ok installed libboost-mpi1.67-dev libboost-mpi1.67-dev 1.67.0-13+deb10u1 install ok installed libboost-mpi1.67.0 libboost-mpi1.67.0 1.67.0-13+deb10u1 install ok installed libboost-program-options-dev:amd64 libboost-program-options-dev 1.67.0.1 install ok installed libboost-program-options1.67-dev:amd64 libboost-program-options1.67-dev 1.67.0-13+deb10u1 install ok installed libboost-program-options1.67.0:amd64 libboost-program-options1.67.0 1.67.0-13+deb10u1 install ok installed libboost-regex1.67-dev:amd64 libboost-regex1.67-dev 1.67.0-13+deb10u1 install ok installed libboost-regex1.67.0:amd64 libboost-regex1.67.0 1.67.0-13+deb10u1 install ok installed libboost-serialization-dev:amd64 libboost-serialization-dev 1.67.0.1 install ok installed libboost-serialization1.67-dev:amd64 libboost-serialization1.67-dev 1.67.0-13+deb10u1 install ok installed libboost-serialization1.67.0:amd64 libboost-serialization1.67.0 1.67.0-13+deb10u1 install ok installed libboost-system1.67-dev:amd64 libboost-system1.67-dev 1.67.0-13+deb10u1 install ok installed libboost-system1.67.0:amd64 libboost-system1.67.0 1.67.0-13+deb10u1 install ok installed libboost-thread-dev:amd64 libboost-thread-dev 1.67.0.1 install ok installed libboost-thread1.67-dev:amd64 libboost-thread1.67-dev 1.67.0-13+deb10u1 install ok installed libboost-thread1.67.0:amd64 libboost-thread1.67.0 1.67.0-13+deb10u1 install ok installed libboost-timer-dev:amd64 libboost-timer-dev 1.67.0.1 install ok installed libboost-timer1.67-dev:amd64 libboost-timer1.67-dev 1.67.0-13+deb10u1 install ok installed libboost-timer1.67.0:amd64 libboost-timer1.67.0 1.67.0-13+deb10u1 install ok installed libboost1.67-dev:amd64 libboost1.67-dev 1.67.0-13+deb10u1 install ok installed libbsd0:amd64 libbsd0 0.9.1-2+deb10u1 install ok installed libbtf1:amd64 libbtf1 1:5.4.0+dfsg-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u1 install ok installed libc-bin libc-bin 2.28-10+deb10u1 install ok installed libc-dev-bin libc-dev-bin 2.28-10+deb10u1 install ok installed libc6:amd64 libc6 2.28-10+deb10u1 install ok installed libc6-dev:amd64 libc6-dev 2.28-10+deb10u1 install ok installed libcamd2:amd64 libcamd2 1:5.4.0+dfsg-1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcc1-0:amd64 libcc1-0 8.3.0-6 install ok installed libccolamd2:amd64 libccolamd2 1:5.4.0+dfsg-1 install ok installed libcholmod3:amd64 libcholmod3 1:5.4.0+dfsg-1 install ok installed libcolamd2:amd64 libcolamd2 1:5.4.0+dfsg-1 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libcombblas1.16.0:amd64 libcombblas1.16.0 1.6.2-3 install ok installed libcurl4:amd64 libcurl4 7.64.0-4+deb10u2 install ok installed libcxsparse3:amd64 libcxsparse3 1:5.4.0+dfsg-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libdolfin-dev libdolfin-dev 2018.1.0.post1-16 install ok installed libdolfin2018.1:amd64 libdolfin2018.1 2018.1.0.post1-16 install ok installed libdpkg-perl libdpkg-perl 1.19.8 install ok installed libedit2:amd64 libedit2 3.1-20181209-1 install ok installed libeigen3-dev libeigen3-dev 3.3.7-1 install ok installed libevent-2.1-6:amd64 libevent-2.1-6 2.1.8-stable-4 install ok installed libevent-core-2.1-6:amd64 libevent-core-2.1-6 2.1.8-stable-4 install ok installed libevent-pthreads-2.1-6:amd64 libevent-pthreads-2.1-6 2.1.8-stable-4 install ok installed libexpat1:amd64 libexpat1 2.2.6-2+deb10u4 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfabric1 libfabric1 1.6.2-3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libfftw3-bin libfftw3-bin 3.3.8-2 install ok installed libfftw3-dev:amd64 libfftw3-dev 3.3.8-2 install ok installed libfftw3-double3:amd64 libfftw3-double3 3.3.8-2 install ok installed libfftw3-long3:amd64 libfftw3-long3 3.3.8-2 install ok installed libfftw3-mpi-dev:amd64 libfftw3-mpi-dev 3.3.8-2 install ok installed libfftw3-mpi3:amd64 libfftw3-mpi3 3.3.8-2 install ok installed libfftw3-quad3:amd64 libfftw3-quad3 3.3.8-2 install ok installed libfftw3-single3:amd64 libfftw3-single3 3.3.8-2 install ok installed libgcc-8-dev:amd64 libgcc-8-dev 8.3.0-6 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5+deb10u1 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.18.1-4 install ok installed libgdbm6:amd64 libgdbm6 1.18.1-4 install ok installed libgfortran-8-dev:amd64 libgfortran-8-dev 8.3.0-6 install ok installed libgfortran5:amd64 libgfortran5 8.3.0-6 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.58.3-2+deb10u3 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4+deb10u1 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u8 install ok installed libgomp1:amd64 libgomp1 8.3.0-6 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libgraphblas2:amd64 libgraphblas2 1:5.4.0+dfsg-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.17-3+deb10u4 install ok installed libhdf5-mpi-dev libhdf5-mpi-dev 1.10.4+repack-10 install ok installed libhdf5-openmpi-103:amd64 libhdf5-openmpi-103 1.10.4+repack-10 install ok installed libhdf5-openmpi-dev libhdf5-openmpi-dev 1.10.4+repack-10 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1+deb10u1 install ok installed libhwloc-dev:amd64 libhwloc-dev 1.11.12-3 install ok installed libhwloc-plugins:amd64 libhwloc-plugins 1.11.12-3 install ok installed libhwloc5:amd64 libhwloc5 1.11.12-3 install ok installed libhypre-2.15.1:amd64 libhypre-2.15.1 2.15.1-5 install ok installed libhypre-dev:amd64 libhypre-dev 2.15.1-5 install ok installed libibverbs-dev:amd64 libibverbs-dev 22.1-1 install ok installed libibverbs1:amd64 libibverbs1 22.1-1 install ok installed libicu-dev:amd64 libicu-dev 63.1-6+deb10u3 install ok installed libicu63:amd64 libicu63 63.1-6+deb10u3 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed libisl19:amd64 libisl19 0.20-2 install ok installed libitm1:amd64 libitm1 8.3.0-6 install ok installed libjpeg-dev libjpeg-dev 1:1.5.2-2+deb10u1 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:1.5.2-2+deb10u1 install ok installed libjpeg62-turbo-dev:amd64 libjpeg62-turbo-dev 1:1.5.2-2+deb10u1 install ok installed libjs-jquery libjs-jquery 3.3.1~dfsg-3+deb10u1 install ok installed libjs-jquery-ui libjs-jquery-ui 1.12.1+dfsg-5 install ok installed libjs-mathjax libjs-mathjax 2.7.4+dfsg-1 install ok installed libjsoncpp1:amd64 libjsoncpp1 1.7.4-3 install ok installed libk5crypto3:amd64 libk5crypto3 1.17-3+deb10u4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6-6 install ok installed libklu1:amd64 libklu1 1:5.4.0+dfsg-1 install ok installed libkrb5-3:amd64 libkrb5-3 1.17-3+deb10u4 install ok installed libkrb5support0:amd64 libkrb5support0 1.17-3+deb10u4 install ok installed liblapack-dev:amd64 liblapack-dev 3.8.0-2 install ok installed liblapack3:amd64 liblapack3 3.8.0-2 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.47+dfsg-3+deb10u7 install ok installed libldap-common libldap-common 2.4.47+dfsg-3+deb10u7 install ok installed libldl2:amd64 libldl2 1:5.4.0+dfsg-1 install ok installed liblsan0:amd64 liblsan0 8.3.0-6 install ok installed libltdl-dev:amd64 libltdl-dev 2.4.6-9 install ok installed libltdl7:amd64 libltdl7 2.4.6-9 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1+deb10u1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+deb10u1 install ok installed libmetis5:amd64 libmetis5 5.1.0.dfsg-5+b2 install ok installed libmongoose2:amd64 libmongoose2 1:5.4.0+dfsg-1 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libmpc3:amd64 libmpc3 1.1.0-1 install ok installed libmpdec2:amd64 libmpdec2 2.4.2-2 install ok installed libmpfr6:amd64 libmpfr6 4.0.2-1 install ok installed libmpx2:amd64 libmpx2 8.3.0-6 install ok installed libmumps-5.1.2:amd64 libmumps-5.1.2 5.1.2-4+b2 install ok installed libmumps-dev:amd64 libmumps-dev 5.1.2-4+b2 install ok installed libncurses6:amd64 libncurses6 6.1+20181013-2+deb10u2 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u2 install ok installed libnettle6:amd64 libnettle6 3.4.1-1+deb10u1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.36.0-2+deb10u1 install ok installed libnl-3-200:amd64 libnl-3-200 3.4.0-1 install ok installed libnl-3-dev:amd64 libnl-3-dev 3.4.0-1 install ok installed libnl-route-3-200:amd64 libnl-route-3-200 3.4.0-1 install ok installed libnl-route-3-dev:amd64 libnl-route-3-dev 3.4.0-1 install ok installed libnuma-dev:amd64 libnuma-dev 2.0.12-1 install ok installed libnuma1:amd64 libnuma1 2.0.12-1 install ok installed libopenmpi-dev:amd64 libopenmpi-dev 3.1.3-11 install ok installed libopenmpi3:amd64 libopenmpi3 3.1.3-11 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2+deb10u1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libparpack2:amd64 libparpack2 3.7.0-2 install ok installed libparpack2-dev:amd64 libparpack2-dev 3.7.0-2 install ok installed libpciaccess0:amd64 libpciaccess0 0.14-1 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libperl5.28:amd64 libperl5.28 5.28.1-6+deb10u1 install ok installed libpetsc-real3.10:amd64 libpetsc-real3.10 3.10.3+dfsg1-5 install ok installed libpetsc-real3.10-dev:amd64 libpetsc-real3.10-dev 3.10.3+dfsg1-5 install ok installed libpetsc3.10-dev-common libpetsc3.10-dev-common 3.10.3+dfsg1-5 install ok installed libpmix2:amd64 libpmix2 3.1.2-3 install ok installed libprocps7:amd64 libprocps7 2:3.3.15-2 install ok installed libpsl5:amd64 libpsl5 0.20.2-2 install ok installed libpsm-infinipath1 libpsm-infinipath1 3.3+20.604758e7-6 install ok installed libpsm2-2 libpsm2-2 11.2.78-1 install ok installed libptscotch-6.0 libptscotch-6.0 6.0.6-2 install ok installed libptscotch-dev libptscotch-dev 6.0.6-2 install ok installed libpython-stdlib:amd64 libpython-stdlib 2.7.16-1 install ok installed libpython2-stdlib:amd64 libpython2-stdlib 2.7.16-1 install ok installed libpython2.7-minimal:amd64 libpython2.7-minimal 2.7.16-2+deb10u1 install ok installed libpython2.7-stdlib:amd64 libpython2.7-stdlib 2.7.16-2+deb10u1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.7.3-1 install ok installed libpython3.7-minimal:amd64 libpython3.7-minimal 3.7.3-2+deb10u3 install ok installed libpython3.7-stdlib:amd64 libpython3.7-stdlib 3.7.3-2+deb10u3 install ok installed libquadmath0:amd64 libquadmath0 8.3.0-6 install ok installed librbio2:amd64 librbio2 1:5.4.0+dfsg-1 install ok installed librdmacm1:amd64 librdmacm1 22.1-1 install ok installed libreadline7:amd64 libreadline7 7.0-5 install ok installed librhash0:amd64 librhash0 1.3.8-1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.27+dfsg-1+deb10u2 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.27+dfsg-1+deb10u2 install ok installed libscalapack-mpi-dev libscalapack-mpi-dev 2.0.2-7+b2 install ok installed libscalapack-openmpi-dev libscalapack-openmpi-dev 2.0.2-7+b2 install ok installed libscalapack-openmpi2.0 libscalapack-openmpi2.0 2.0.2-7+b2 install ok installed libscotch-6.0 libscotch-6.0 6.0.6-2 install ok installed libscotch-dev libscotch-dev 6.0.6-2 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsigsegv2:amd64 libsigsegv2 2.12-2 install ok installed libslepc-real3.10 libslepc-real3.10 3.10.1+dfsg1-3 install ok installed libslepc-real3.10-dev libslepc-real3.10-dev 3.10.1+dfsg1-3 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libspqr2:amd64 libspqr2 1:5.4.0+dfsg-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.27.2-3+deb10u1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libssh2-1:amd64 libssh2-1 1.8.0-2.1 install ok installed libssl-dev:amd64 libssl-dev 1.1.1n-0+deb10u3 install ok installed libssl1.1:amd64 libssl1.1 1.1.1n-0+deb10u3 install ok installed libstdc++-8-dev:amd64 libstdc++-8-dev 8.3.0-6 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsuitesparse-dev:amd64 libsuitesparse-dev 1:5.4.0+dfsg-1 install ok installed libsuitesparseconfig5:amd64 libsuitesparseconfig5 1:5.4.0+dfsg-1 install ok installed libsuperlu-dev:amd64 libsuperlu-dev 5.2.1+dfsg1-4 install ok installed libsuperlu-dist-dev:amd64 libsuperlu-dist-dev 6.1.1+dfsg1-1 install ok installed libsuperlu-dist6:amd64 libsuperlu-dist6 6.1.1+dfsg1-1 install ok installed libsuperlu5:amd64 libsuperlu5 5.2.1+dfsg1-4 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u8 install ok installed libsz2:amd64 libsz2 1.0.2-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u2 install ok installed libtsan0:amd64 libtsan0 8.3.0-6 install ok installed libubsan1:amd64 libubsan1 8.3.0-6 install ok installed libudev1:amd64 libudev1 241-7~deb10u8 install ok installed libumfpack5:amd64 libumfpack5 1:5.4.0+dfsg-1 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libuv1:amd64 libuv1 1.24.1-1+deb10u1 install ok installed libxml2:amd64 libxml2 2.9.4+dfsg1-7+deb10u4 install ok installed libxml2-dev:amd64 libxml2-dev 2.9.4+dfsg1-7+deb10u4 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3+deb10u2 install ok installed linux-libc-dev:amd64 linux-libc-dev 4.19.249-2 install ok installed login login 1:4.5-1.1 install ok installed lsb-base lsb-base 10.2019051400 install ok installed m4 m4 1.4.18-2 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mime-support mime-support 3.62 install ok installed mount mount 2.33.1-0.1 install ok installed mpi-default-bin mpi-default-bin 1.13 install ok installed mpi-default-dev mpi-default-dev 1.13 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u2 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u2 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.2.12-2 install ok installed openmpi-bin openmpi-bin 3.1.3-11 install ok installed openmpi-common openmpi-common 3.1.3-11 install ok installed openssh-client openssh-client 1:7.9p1-10+deb10u2 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl perl 5.28.1-6+deb10u1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed perl-modules-5.28 perl-modules-5.28 5.28.1-6+deb10u1 install ok installed pkg-config pkg-config 0.29-6 install ok installed procps procps 2:3.3.15-2 install ok installed pybind11-dev pybind11-dev 2.2.4-2 install ok installed python python 2.7.16-1 install ok installed python-minimal python-minimal 2.7.16-1 install ok installed python2 python2 2.7.16-1 install ok installed python2-minimal python2-minimal 2.7.16-1 install ok installed python2.7 python2.7 2.7.16-2+deb10u1 install ok installed python2.7-minimal python2.7-minimal 2.7.16-2+deb10u1 install ok installed python3 python3 3.7.3-1 install ok installed python3-dijitso python3-dijitso 2018.1.1~git1-1 install ok installed python3-dolfin python3-dolfin 2018.1.0.post1-16 install ok installed python3-ffc python3-ffc 2018.1.0-5 install ok installed python3-fiat python3-fiat 2018.1.0-5 install ok installed python3-minimal python3-minimal 3.7.3-1 install ok installed python3-mpi4py python3-mpi4py 2.0.0-3+b3 install ok installed python3-mpmath python3-mpmath 1.1.0-1 install ok installed python3-numpy python3-numpy 1:1.16.2-1 install ok installed python3-petsc4py python3-petsc4py 3.10.1-1 install ok installed python3-petsc4py-real python3-petsc4py-real 3.10.1-1 install ok installed python3-pkg-resources python3-pkg-resources 40.8.0-1 install ok installed python3-pkgconfig python3-pkgconfig 1.4.0-1 install ok installed python3-ply python3-ply 3.11-3 install ok installed python3-pybind11 python3-pybind11 2.2.4-2 install ok installed python3-six python3-six 1.12.0-1 install ok installed python3-slepc4py python3-slepc4py 3.10.0-2 install ok installed python3-slepc4py-real python3-slepc4py-real 3.10.0-2 install ok installed python3-sympy python3-sympy 1.3-2 install ok installed python3-ufl python3-ufl 2018.1.0-5 install ok installed python3.7 python3.7 3.7.3-2+deb10u3 install ok installed python3.7-minimal python3.7-minimal 3.7.3-2+deb10u3 install ok installed readline-common readline-common 7.0-5 install ok installed sed sed 4.7-1 install ok installed swig swig 3.0.12-2 install ok installed swig3.0 swig3.0 3.0.12-2 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed tzdata tzdata 2021a-0+deb10u6 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1+deb10u1 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.2.11.dfsg-1+deb10u1 1m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', 'remove', 'autoconf', 'automake', 'autotools-dev', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cmake', 'cmake-data', 'cpp', 'cpp-8', 'fonts-mathjax', 'gcc', 'gcc-8', 'gfortran', 'gfortran-8', 'ibverbs-providers:amd64', 'icu-devtools', 'libaec-dev:amd64', 'libaec0:amd64', 'libamd2:amd64', 'libarchive13:amd64', 'libarpack2:amd64', 'libarpack2-dev:amd64', 'libasan5:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libboost-atomic1.67-dev:amd64', 'libboost-atomic1.67.0:amd64', 'libboost-chrono-dev:amd64', 'libboost-chrono1.67-dev:amd64', 'libboost-chrono1.67.0:amd64', 'libboost-date-time1.67-dev:amd64', 'libboost-date-time1.67.0:amd64', 'libboost-dev:amd64', 'libboost-filesystem-dev:amd64', 'libboost-filesystem1.67-dev:amd64', 'libboost-filesystem1.67.0:amd64', 'libboost-iostreams-dev:amd64', 'libboost-iostreams1.67-dev:amd64', 'libboost-iostreams1.67.0:amd64', 'libboost-math-dev:amd64', 'libboost-math1.67-dev:amd64', 'libboost-math1.67.0:amd64', 'libboost-mpi-dev', 'libboost-mpi1.67-dev', 'libboost-mpi1.67.0', 'libboost-program-options-dev:amd64', 'libboost-program-options1.67-dev:amd64', 'libboost-program-options1.67.0:amd64', 'libboost-regex1.67-dev:amd64', 'libboost-regex1.67.0:amd64', 'libboost-serialization-dev:amd64', 'libboost-serialization1.67-dev:amd64', 'libboost-serialization1.67.0:amd64', 'libboost-system1.67-dev:amd64', 'libboost-system1.67.0:amd64', 'libboost-thread-dev:amd64', 'libboost-thread1.67-dev:amd64', 'libboost-thread1.67.0:amd64', 'libboost-timer-dev:amd64', 'libboost-timer1.67-dev:amd64', 'libboost-timer1.67.0:amd64', 'libboost1.67-dev:amd64', 'libbsd0:amd64', 'libbtf1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcamd2:amd64', 'libcc1-0:amd64', 'libccolamd2:amd64', 'libcholmod3:amd64', 'libcolamd2:amd64', 'libcombblas1.16.0:amd64', 'libcurl4:amd64', 'libcxsparse3:amd64', 'libdolfin-dev', 'libdolfin2018.1:amd64', 'libdpkg-perl', 'libedit2:amd64', 'libeigen3-dev', 'libevent-2.1-6:amd64', 'libevent-core-2.1-6:amd64', 'libevent-pthreads-2.1-6:amd64', 'libexpat1:amd64', 'libfabric1', 'libfftw3-bin', 'libfftw3-dev:amd64', 'libfftw3-double3:amd64', 'libfftw3-long3:amd64', 'libfftw3-mpi-dev:amd64', 'libfftw3-mpi3:amd64', 'libfftw3-quad3:amd64', 'libfftw3-single3:amd64', 'libgcc-8-dev:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran-8-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphblas2:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-mpi-dev', 'libhdf5-openmpi-103:amd64', 'libhdf5-openmpi-dev', 'libhwloc-dev:amd64', 'libhwloc-plugins:amd64', 'libhwloc5:amd64', 'libhypre-2.15.1:amd64', 'libhypre-dev:amd64', 'libibverbs-dev:amd64', 'libibverbs1:amd64', 'libicu-dev:amd64', 'libicu63:amd64', 'libisl19:amd64', 'libitm1:amd64', 'libjpeg-dev', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-mathjax', 'libjsoncpp1:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libklu1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libldl2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmetis5:amd64', 'libmongoose2:amd64', 'libmpc3:amd64', 'libmpdec2:amd64', 'libmpfr6:amd64', 'libmpx2:amd64', 'libmumps-5.1.2:amd64', 'libmumps-dev:amd64', 'libncurses6:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-3-dev:amd64', 'libnl-route-3-200:amd64', 'libnl-route-3-dev:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev:amd64', 'libopenmpi3:amd64', 'libparpack2:amd64', 'libparpack2-dev:amd64', 'libpciaccess0:amd64', 'libperl5.28:amd64', 'libpetsc-real3.10:amd64', 'libpetsc-real3.10-dev:amd64', 'libpetsc3.10-dev-common', 'libpmix2:amd64', 'libprocps7:amd64', 'libpsl5:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptscotch-6.0', 'libptscotch-dev', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libpython3-stdlib:amd64', 'libpython3.7-minimal:amd64', 'libpython3.7-stdlib:amd64', 'libquadmath0:amd64', 'librbio2:amd64', 'librdmacm1:amd64', 'libreadline7:amd64', 'librhash0:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libscalapack-mpi-dev', 'libscalapack-openmpi-dev', 'libscalapack-openmpi2.0', 'libscotch-6.0', 'libscotch-dev', 'libsigsegv2:amd64', 'libslepc-real3.10', 'libslepc-real3.10-dev', 'libspqr2:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl-dev:amd64', 'libssl1.1:amd64', 'libstdc++-8-dev:amd64', 'libsuitesparse-dev:amd64', 'libsuitesparseconfig5:amd64', 'libsuperlu-dev:amd64', 'libsuperlu-dist-dev:amd64', 'libsuperlu-dist6:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libumfpack5:amd64', 'libuv1:amd64', 'libxml2:amd64', 'libxml2-dev:amd64', 'linux-libc-dev:amd64', 'lsb-base', 'm4', 'mime-support', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'perl', 'perl-modules-5.28', 'pkg-config', 'procps', 'pybind11-dev', 'python', 'python-minimal', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'python3', 'python3-dijitso', 'python3-dolfin', 'python3-ffc', 'python3-fiat', 'python3-minimal', 'python3-mpi4py', 'python3-mpmath', 'python3-numpy', 'python3-petsc4py', 'python3-petsc4py-real', 'python3-pkg-resources', 'python3-pkgconfig', 'python3-ply', 'python3-pybind11', 'python3-six', 'python3-slepc4py', 'python3-slepc4py-real', 'python3-sympy', 'python3-ufl', 'python3.7', 'python3.7-minimal', 'readline-common', 'swig', 'swig3.0', 'zlib1g-dev:amd64', 'dolfin-doc'] 1m44.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: autoconf automake autotools-dev binutils binutils-common binutils-x86-64-linux-gnu cmake cmake-data cpp cpp-8 dolfin-doc fonts-mathjax gcc gcc-8 gfortran gfortran-8 ibverbs-providers icu-devtools libaec-dev libaec0 libamd2 libarchive13 libarpack2 libarpack2-dev libasan5 libatomic1 libbinutils libblas-dev libblas3 libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-system1.67-dev libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost1.67-dev libbsd0 libbtf1 libc-dev-bin libc6-dev libcamd2 libcc1-0 libccolamd2 libcholmod3 libcolamd2 libcombblas1.16.0 libcurl4 libcxsparse3 libdolfin-dev libdolfin2018.1 libdpkg-perl libedit2 libeigen3-dev libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libgcc-8-dev libgdbm-compat4 libgdbm6 libgfortran-8-dev libgfortran5 libglib2.0-0 libgomp1 libgraphblas2 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libhwloc-dev libhwloc-plugins libhwloc5 libhypre-2.15.1 libhypre-dev libibverbs-dev libibverbs1 libicu-dev libicu63 libisl19 libitm1 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjs-mathjax libjsoncpp1 libk5crypto3 libkeyutils1 libklu1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libldl2 liblsan0 libltdl-dev libltdl7 libmetis5 libmongoose2 libmpc3 libmpdec2 libmpfr6 libmpx2 libmumps-5.1.2 libmumps-dev libncurses6 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libparpack2 libparpack2-dev libpciaccess0 libperl5.28 libpetsc-real3.10 libpetsc-real3.10-dev libpetsc3.10-dev-common libpmix2 libprocps7 libpsl5 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libptscotch-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libquadmath0 librbio2 librdmacm1 libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.0 libscotch-6.0 libscotch-dev libsigsegv2 libslepc-real3.10 libslepc-real3.10-dev libspqr2 libsqlite3-0 libssh2-1 libssl-dev libssl1.1 libstdc++-8-dev libsuitesparse-dev libsuitesparseconfig5 libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist6 libsuperlu5 libsz2 libtsan0 libubsan1 libumfpack5 libuv1 libxml2 libxml2-dev linux-libc-dev lsb-base m4 mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client perl perl-modules-5.28 pkg-config procps pybind11-dev python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-dijitso python3-dolfin python3-ffc python3-fiat python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-petsc4py python3-petsc4py-real python3-pkg-resources python3-pkgconfig python3-ply python3-pybind11 python3-six python3-slepc4py python3-slepc4py-real python3-sympy python3-ufl python3.7 python3.7-minimal readline-common swig swig3.0 zlib1g-dev 0 upgraded, 0 newly installed, 260 to remove and 0 not upgraded. After this operation, 1068 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 44263 files and directories currently installed.) Removing dolfin-doc (2018.1.0.post1-16) ... Removing python3-dolfin (2018.1.0.post1-16) ... Removing libdolfin-dev (2018.1.0.post1-16) ... Removing libslepc-real3.10-dev (3.10.1+dfsg1-3) ... Removing libpetsc-real3.10-dev:amd64 (3.10.3+dfsg1-5) ... Removing libparpack2-dev:amd64 (3.7.0-2) ... Removing gfortran (4:8.3.0-1) ... Removing gcc (4:8.3.0-1) ... Removing gfortran-8 (8.3.0-6) ... Removing gcc-8 (8.3.0-6) ... Removing binutils (2.31.1-16) ... Removing binutils-x86-64-linux-gnu (2.31.1-16) ... Removing libbinutils:amd64 (2.31.1-16) ... Removing binutils-common:amd64 (2.31.1-16) ... Removing cmake (3.13.4-1) ... Removing cmake-data (3.13.4-1) ... Removing cpp (4:8.3.0-1) ... Removing cpp-8 (8.3.0-6) ... Removing libpetsc3.10-dev-common (3.10.3+dfsg1-5) ... Removing libjs-mathjax (2.7.4+dfsg-1) ... Removing fonts-mathjax (2.7.4+dfsg-1) ... Removing libxml2-dev:amd64 (2.9.4+dfsg1-7+deb10u4) ... Removing libboost-iostreams-dev:amd64 (1.67.0.1) ... Removing libboost-iostreams1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-regex1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libicu-dev:amd64 (63.1-6+deb10u3) ... Removing icu-devtools (63.1-6+deb10u3) ... Removing libhdf5-mpi-dev (1.10.4+repack-10) ... Removing libhdf5-openmpi-dev (1.10.4+repack-10) ... Removing libaec-dev:amd64 (1.0.2-1) ... Removing python3-slepc4py (3.10.0-2) ... Removing python3-slepc4py-real (3.10.0-2) ... Removing libdolfin2018.1:amd64 (2018.1.0.post1-16) ... Removing libslepc-real3.10 (3.10.1+dfsg1-3) ... Removing python3-petsc4py (3.10.1-1) ... Removing python3-petsc4py-real (3.10.1-1) ... Removing libpetsc-real3.10:amd64 (3.10.3+dfsg1-5) ... Removing libhdf5-openmpi-103:amd64 (1.10.4+repack-10) ... Removing libsz2:amd64 (1.0.2-1) ... Removing libaec0:amd64 (1.0.2-1) ... Removing libsuitesparse-dev:amd64 (1:5.4.0+dfsg-1) ... Removing libumfpack5:amd64 (1:5.4.0+dfsg-1) ... Removing libarchive13:amd64 (3.3.3-4+deb10u1) ... Removing libarpack2-dev:amd64 (3.7.0-2) ... Removing libparpack2:amd64 (3.7.0-2) ... Removing libarpack2:amd64 (3.7.0-2) ... Removing libboost-thread-dev:amd64 (1.67.0.1) ... Removing libboost-thread1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-atomic1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-timer-dev:amd64 (1.67.0.1) ... Removing libboost-timer1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libgfortran-8-dev:amd64 (8.3.0-6) ... Removing libhypre-dev:amd64 (2.15.1-5) ... Removing libsuperlu-dev:amd64 (5.2.1+dfsg1-4) ... Removing liblapack-dev:amd64 (3.8.0-2) ... Removing libblas-dev:amd64 (3.8.0-2) ... Removing libsuperlu-dist-dev:amd64 (6.1.1+dfsg1-1) ... Removing libhypre-2.15.1:amd64 (2.15.1-5) ... Removing libsuperlu-dist6:amd64 (6.1.1+dfsg1-1) ... Removing libsuperlu5:amd64 (5.2.1+dfsg1-4) ... Removing libspqr2:amd64 (1:5.4.0+dfsg-1) ... Removing libcholmod3:amd64 (1:5.4.0+dfsg-1) ... Removing libboost-thread1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-atomic1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-chrono-dev:amd64 (1.67.0.1) ... Removing libboost-chrono1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-timer1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-chrono1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-date-time1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-date-time1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-dev:amd64 (1.67.0.1) ... Removing libboost-filesystem-dev:amd64 (1.67.0.1) ... Removing libboost-filesystem1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-filesystem1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-iostreams1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-math-dev:amd64 (1.67.0.1) ... Removing libboost-math1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-math1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-mpi-dev (1.67.0.1) ... Removing libboost-mpi1.67-dev (1.67.0-13+deb10u1) ... Removing libboost-mpi1.67.0 (1.67.0-13+deb10u1) ... Removing libboost-program-options-dev:amd64 (1.67.0.1) ... Removing libboost-program-options1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-program-options1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-regex1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-serialization-dev:amd64 (1.67.0.1) ... Removing libboost-serialization1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-serialization1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libboost-system1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libboost-system1.67.0:amd64 (1.67.0-13+deb10u1) ... Removing libmumps-dev:amd64 (5.1.2-4+b2) ... Removing libscalapack-mpi-dev (2.0.2-7+b2) ... Removing libscalapack-openmpi-dev (2.0.2-7+b2) ... Removing libmumps-5.1.2:amd64 (5.1.2-4+b2) ... Removing libscalapack-openmpi2.0 (2.0.2-7+b2) ... Removing mpi-default-bin (1.13) ... Removing libklu1:amd64 (1:5.4.0+dfsg-1) ... Removing libbtf1:amd64 (1:5.4.0+dfsg-1) ... Removing libptscotch-dev (6.0.6-2) ... Removing libscotch-dev (6.0.6-2) ... Removing zlib1g-dev:amd64 (1:1.2.11.dfsg-1+deb10u1) ... Removing libjpeg-dev (1:1.5.2-2+deb10u1) ... Removing libjpeg62-turbo-dev:amd64 (1:1.5.2-2+deb10u1) ... Removing libcamd2:amd64 (1:5.4.0+dfsg-1) ... Removing libcc1-0:amd64 (8.3.0-6) ... Removing libccolamd2:amd64 (1:5.4.0+dfsg-1) ... Removing libcolamd2:amd64 (1:5.4.0+dfsg-1) ... Removing libcombblas1.16.0:amd64 (1.6.2-3) ... Removing libcurl4:amd64 (7.64.0-4+deb10u2) ... Removing libcxsparse3:amd64 (1:5.4.0+dfsg-1) ... Removing python3-pkgconfig (1.4.0-1) ... Removing libeigen3-dev (3.3.7-1) ... Removing pkg-config (0.29-6) ... Removing libdpkg-perl (1.19.8) ... Removing libptscotch-6.0 (6.0.6-2) ... Removing libscotch-6.0 (6.0.6-2) ... Removing python3-ffc (2018.1.0-5) ... Removing python3-dijitso (2018.1.1~git1-1) ... Removing python3-mpi4py (2.0.0-3+b3) ... Removing python3-ufl (2018.1.0-5) ... Removing python3-fiat (2018.1.0-5) ... Removing python3-numpy (1:1.16.2-1) ... Removing python3-sympy (1.3-2) ... Removing python3-six (1.12.0-1) ... Removing python (2.7.16-1) ... Removing libfftw3-dev:amd64 (3.3.8-2) ... Removing libfftw3-bin (3.3.8-2) ... Removing libfftw3-mpi-dev:amd64 (3.3.8-2) ... Removing libfftw3-mpi3:amd64 (3.3.8-2) ... Removing libfftw3-double3:amd64 (3.3.8-2) ... Removing libfftw3-long3:amd64 (3.3.8-2) ... Removing libfftw3-quad3:amd64 (3.3.8-2) ... Removing libfftw3-single3:amd64 (3.3.8-2) ... Removing liblapack3:amd64 (3.8.0-2) ... Removing libglib2.0-0:amd64 (2.58.3-2+deb10u3) ... Removing libgraphblas2:amd64 (1:5.4.0+dfsg-1) ... Removing libisl19:amd64 (0.20-2) ... Removing libjpeg62-turbo:amd64 (1:1.5.2-2+deb10u1) ... Removing libjs-jquery-ui (1.12.1+dfsg-5) ... Removing libjs-jquery (3.3.1~dfsg-3+deb10u1) ... Removing libjsoncpp1:amd64 (1.7.4-3) ... Removing libldap-2.4-2:amd64 (2.4.47+dfsg-3+deb10u7) ... Removing libldap-common (2.4.47+dfsg-3+deb10u7) ... Removing libldl2:amd64 (1:5.4.0+dfsg-1) ... Removing libmetis5:amd64 (5.1.0.dfsg-5+b2) ... Removing libmongoose2:amd64 (1:5.4.0+dfsg-1) ... Removing libmpc3:amd64 (1.1.0-1) ... Removing libmpfr6:amd64 (4.0.2-1) ... Removing procps (2:3.3.15-2) ... Removing libncurses6:amd64 (6.1+20181013-2+deb10u2) ... Removing libnghttp2-14:amd64 (1.36.0-2+deb10u1) ... Removing libprocps7:amd64 (2:3.3.15-2) ... Removing libpsl5:amd64 (0.20.2-2) ... Removing libpython-stdlib:amd64 (2.7.16-1) ... Removing python2 (2.7.16-1) ... Removing libpython2-stdlib:amd64 (2.7.16-1) ... Removing python-minimal (2.7.16-1) ... Removing librbio2:amd64 (1:5.4.0+dfsg-1) ... Removing librhash0:amd64 (1.3.8-1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2) ... Removing libsasl2-2:amd64 (2.1.27+dfsg-1+deb10u2) ... Removing libsasl2-modules-db:amd64 (2.1.27+dfsg-1+deb10u2) ... Removing libssh2-1:amd64 (1.8.0-2.1) ... Removing libssl-dev:amd64 (1.1.1n-0+deb10u3) ... Removing libuv1:amd64 (1.24.1-1+deb10u1) ... Removing lsb-base (10.2019051400) ... Removing python3-pybind11 (2.2.4-2) ... Removing pybind11-dev (2.2.4-2) ... Removing python2-minimal (2.7.16-1) ... Removing python3-mpmath (1.1.0-1) ... Removing python3-pkg-resources (40.8.0-1) ... Removing python3-ply (3.11-3) ... Removing swig (3.0.12-2) ... Removing swig3.0 (3.0.12-2) ... Removing mpi-default-dev (1.13) ... Removing libopenmpi-dev:amd64 (3.1.3-11) ... Removing libhwloc-dev:amd64 (1.11.12-3) ... Removing libltdl-dev:amd64 (2.4.6-9) ... Removing automake (1:1.16.1-4) ... Removing autoconf (2.69-11) ... Removing autotools-dev (20180224.1) ... Removing libibverbs-dev:amd64 (22.1-1) ... Removing ibverbs-providers:amd64 (22.1-1) ... Removing libamd2:amd64 (1:5.4.0+dfsg-1) ... Removing libboost1.67-dev:amd64 (1.67.0-13+deb10u1) ... Removing libstdc++-8-dev:amd64 (8.3.0-6) ... Removing libgcc-8-dev:amd64 (8.3.0-6) ... Removing libasan5:amd64 (8.3.0-6) ... Removing libatomic1:amd64 (8.3.0-6) ... Removing libblas3:amd64 (3.8.0-2) ... Removing openmpi-bin (3.1.3-11) ... Removing openssh-client (1:7.9p1-10+deb10u2) ... Removing libedit2:amd64 (3.1-20181209-1) ... Removing libbsd0:amd64 (0.9.1-2+deb10u1) ... Removing libnuma-dev:amd64 (2.0.12-1) ... Removing libc6-dev:amd64 (2.28-10+deb10u1) ... Removing libc-dev-bin (2.28-10+deb10u1) ... Removing libopenmpi3:amd64 (3.1.3-11) ... Removing libpmix2:amd64 (3.1.2-3) ... Removing libevent-2.1-6:amd64 (2.1.8-stable-4) ... Removing libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4) ... Removing libevent-core-2.1-6:amd64 (2.1.8-stable-4) ... Removing python3 (3.7.3-1) ... Removing python3.7 (3.7.3-2+deb10u3) ... Removing python3-minimal (3.7.3-1) ... Removing python3.7-minimal (3.7.3-2+deb10u3) ... Removing python2.7 (2.7.16-2+deb10u1) ... Removing libpython2.7-stdlib:amd64 (2.7.16-2+deb10u1) ... Removing libexpat1:amd64 (2.2.6-2+deb10u4) ... Removing libfabric1 (1.6.2-3) ... Removing perl (5.28.1-6+deb10u1) ... Removing libperl5.28:amd64 (5.28.1-6+deb10u1) ... Removing libgdbm-compat4:amd64 (1.18.1-4) ... Removing libgdbm6:amd64 (1.18.1-4) ... Removing libgfortran5:amd64 (8.3.0-6) ... Removing libgomp1:amd64 (8.3.0-6) ... Removing libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... Removing libhwloc-plugins:amd64 (1.11.12-3) ... Removing libhwloc5:amd64 (1.11.12-3) ... Removing librdmacm1:amd64 (22.1-1) ... Removing libibverbs1:amd64 (22.1-1) ... Removing libxml2:amd64 (2.9.4+dfsg1-7+deb10u4) ... Removing libicu63:amd64 (63.1-6+deb10u3) ... Removing libitm1:amd64 (8.3.0-6) ... Removing libkrb5-3:amd64 (1.17-3+deb10u4) ... Removing libk5crypto3:amd64 (1.17-3+deb10u4) ... Removing libkrb5support0:amd64 (1.17-3+deb10u4) ... Removing libkeyutils1:amd64 (1.6-6) ... Removing liblsan0:amd64 (8.3.0-6) ... Removing libltdl7:amd64 (2.4.6-9) ... Removing libpython3-stdlib:amd64 (3.7.3-1) ... Removing libpython3.7-stdlib:amd64 (3.7.3-2+deb10u3) ... find: '/usr/lib/python3': No such file or directory Removing libmpdec2:amd64 (2.4.2-2) ... Removing libmpx2:amd64 (8.3.0-6) ... Removing libnl-route-3-dev:amd64 (3.4.0-1) ... Removing libnl-route-3-200:amd64 (3.4.0-1) ... Removing libnl-3-dev:amd64 (3.4.0-1) ... Removing libnl-3-200:amd64 (3.4.0-1) ... Removing libpsm2-2 (11.2.78-1) ... Removing libnuma1:amd64 (2.0.12-1) ... Removing libpciaccess0:amd64 (0.14-1) ... Removing libpsm-infinipath1 (3.3+20.604758e7-6) ... update-alternatives: warning: alternative /usr/lib/libpsm1/libpsm_infinipath.so.1.16 (part of link group libpsm_infinipath.so.1) doesn't exist; removing from list of alternatives update-alternatives: warning: /etc/alternatives/libpsm_infinipath.so.1 is dangling; it will be updated with best choice Removing python2.7-minimal (2.7.16-2+deb10u1) ... Removing libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... find: '/usr/lib/python2.7': No such file or directory Removing libpython3.7-minimal:amd64 (3.7.3-2+deb10u3) ... find: '/usr/lib/python3': No such file or directory Removing libquadmath0:amd64 (8.3.0-6) ... Removing libreadline7:amd64 (7.0-5) ... Removing m4 (1.4.18-2) ... Removing libsigsegv2:amd64 (2.12-2) ... Removing libsqlite3-0:amd64 (3.27.2-3+deb10u1) ... Removing libssl1.1:amd64 (1.1.1n-0+deb10u3) ... Removing libsuitesparseconfig5:amd64 (1:5.4.0+dfsg-1) ... Removing libtsan0:amd64 (8.3.0-6) ... Removing libubsan1:amd64 (8.3.0-6) ... Removing linux-libc-dev:amd64 (4.19.249-2) ... Removing mime-support (3.62) ... Removing ocl-icd-libopencl1:amd64 (2.2.12-2) ... Removing openmpi-common (3.1.3-11) ... Removing perl-modules-5.28 (5.28.1-6+deb10u1) ... Removing readline-common (7.0-5) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... 1m44.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', 'remove', 'autoconf', 'automake', 'autotools-dev', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cmake', 'cmake-data', 'cpp', 'cpp-8', 'fonts-mathjax', 'gcc', 'gcc-8', 'gfortran', 'gfortran-8', 'ibverbs-providers:amd64', 'icu-devtools', 'libaec-dev:amd64', 'libaec0:amd64', 'libamd2:amd64', 'libarchive13:amd64', 'libarpack2:amd64', 'libarpack2-dev:amd64', 'libasan5:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libboost-atomic1.67-dev:amd64', 'libboost-atomic1.67.0:amd64', 'libboost-chrono-dev:amd64', 'libboost-chrono1.67-dev:amd64', 'libboost-chrono1.67.0:amd64', 'libboost-date-time1.67-dev:amd64', 'libboost-date-time1.67.0:amd64', 'libboost-dev:amd64', 'libboost-filesystem-dev:amd64', 'libboost-filesystem1.67-dev:amd64', 'libboost-filesystem1.67.0:amd64', 'libboost-iostreams-dev:amd64', 'libboost-iostreams1.67-dev:amd64', 'libboost-iostreams1.67.0:amd64', 'libboost-math-dev:amd64', 'libboost-math1.67-dev:amd64', 'libboost-math1.67.0:amd64', 'libboost-mpi-dev', 'libboost-mpi1.67-dev', 'libboost-mpi1.67.0', 'libboost-program-options-dev:amd64', 'libboost-program-options1.67-dev:amd64', 'libboost-program-options1.67.0:amd64', 'libboost-regex1.67-dev:amd64', 'libboost-regex1.67.0:amd64', 'libboost-serialization-dev:amd64', 'libboost-serialization1.67-dev:amd64', 'libboost-serialization1.67.0:amd64', 'libboost-system1.67-dev:amd64', 'libboost-system1.67.0:amd64', 'libboost-thread-dev:amd64', 'libboost-thread1.67-dev:amd64', 'libboost-thread1.67.0:amd64', 'libboost-timer-dev:amd64', 'libboost-timer1.67-dev:amd64', 'libboost-timer1.67.0:amd64', 'libboost1.67-dev:amd64', 'libbsd0:amd64', 'libbtf1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcamd2:amd64', 'libcc1-0:amd64', 'libccolamd2:amd64', 'libcholmod3:amd64', 'libcolamd2:amd64', 'libcombblas1.16.0:amd64', 'libcurl4:amd64', 'libcxsparse3:amd64', 'libdolfin-dev', 'libdolfin2018.1:amd64', 'libdpkg-perl', 'libedit2:amd64', 'libeigen3-dev', 'libevent-2.1-6:amd64', 'libevent-core-2.1-6:amd64', 'libevent-pthreads-2.1-6:amd64', 'libexpat1:amd64', 'libfabric1', 'libfftw3-bin', 'libfftw3-dev:amd64', 'libfftw3-double3:amd64', 'libfftw3-long3:amd64', 'libfftw3-mpi-dev:amd64', 'libfftw3-mpi3:amd64', 'libfftw3-quad3:amd64', 'libfftw3-single3:amd64', 'libgcc-8-dev:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran-8-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphblas2:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-mpi-dev', 'libhdf5-openmpi-103:amd64', 'libhdf5-openmpi-dev', 'libhwloc-dev:amd64', 'libhwloc-plugins:amd64', 'libhwloc5:amd64', 'libhypre-2.15.1:amd64', 'libhypre-dev:amd64', 'libibverbs-dev:amd64', 'libibverbs1:amd64', 'libicu-dev:amd64', 'libicu63:amd64', 'libisl19:amd64', 'libitm1:amd64', 'libjpeg-dev', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-mathjax', 'libjsoncpp1:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libklu1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libldl2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmetis5:amd64', 'libmongoose2:amd64', 'libmpc3:amd64', 'libmpdec2:amd64', 'libmpfr6:amd64', 'libmpx2:amd64', 'libmumps-5.1.2:amd64', 'libmumps-dev:amd64', 'libncurses6:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-3-dev:amd64', 'libnl-route-3-200:amd64', 'libnl-route-3-dev:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev:amd64', 'libopenmpi3:amd64', 'libparpack2:amd64', 'libparpack2-dev:amd64', 'libpciaccess0:amd64', 'libperl5.28:amd64', 'libpetsc-real3.10:amd64', 'libpetsc-real3.10-dev:amd64', 'libpetsc3.10-dev-common', 'libpmix2:amd64', 'libprocps7:amd64', 'libpsl5:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptscotch-6.0', 'libptscotch-dev', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libpython3-stdlib:amd64', 'libpython3.7-minimal:amd64', 'libpython3.7-stdlib:amd64', 'libquadmath0:amd64', 'librbio2:amd64', 'librdmacm1:amd64', 'libreadline7:amd64', 'librhash0:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libscalapack-mpi-dev', 'libscalapack-openmpi-dev', 'libscalapack-openmpi2.0', 'libscotch-6.0', 'libscotch-dev', 'libsigsegv2:amd64', 'libslepc-real3.10', 'libslepc-real3.10-dev', 'libspqr2:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl-dev:amd64', 'libssl1.1:amd64', 'libstdc++-8-dev:amd64', 'libsuitesparse-dev:amd64', 'libsuitesparseconfig5:amd64', 'libsuperlu-dev:amd64', 'libsuperlu-dist-dev:amd64', 'libsuperlu-dist6:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libumfpack5:amd64', 'libuv1:amd64', 'libxml2:amd64', 'libxml2-dev:amd64', 'linux-libc-dev:amd64', 'lsb-base', 'm4', 'mime-support', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'perl', 'perl-modules-5.28', 'pkg-config', 'procps', 'pybind11-dev', 'python', 'python-minimal', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'python3', 'python3-dijitso', 'python3-dolfin', 'python3-ffc', 'python3-fiat', 'python3-minimal', 'python3-mpi4py', 'python3-mpmath', 'python3-numpy', 'python3-petsc4py', 'python3-petsc4py-real', 'python3-pkg-resources', 'python3-pkgconfig', 'python3-ply', 'python3-pybind11', 'python3-six', 'python3-slepc4py', 'python3-slepc4py-real', 'python3-sympy', 'python3-ufl', 'python3.7', 'python3.7-minimal', 'readline-common', 'swig', 'swig3.0', 'zlib1g-dev:amd64', 'dolfin-doc'] 1m44.5s INFO: Running scripts post_remove 1m44.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_remove_exceptions'] 1m44.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_remove_exceptions'] 1m44.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg', '--purge', 'autoconf', 'automake', 'autotools-dev', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cmake', 'cmake-data', 'cpp', 'cpp-8', 'fonts-mathjax', 'gcc', 'gcc-8', 'gfortran', 'gfortran-8', 'ibverbs-providers:amd64', 'icu-devtools', 'libaec-dev:amd64', 'libaec0:amd64', 'libamd2:amd64', 'libarchive13:amd64', 'libarpack2:amd64', 'libarpack2-dev:amd64', 'libasan5:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libboost-atomic1.67-dev:amd64', 'libboost-atomic1.67.0:amd64', 'libboost-chrono-dev:amd64', 'libboost-chrono1.67-dev:amd64', 'libboost-chrono1.67.0:amd64', 'libboost-date-time1.67-dev:amd64', 'libboost-date-time1.67.0:amd64', 'libboost-dev:amd64', 'libboost-filesystem-dev:amd64', 'libboost-filesystem1.67-dev:amd64', 'libboost-filesystem1.67.0:amd64', 'libboost-iostreams-dev:amd64', 'libboost-iostreams1.67-dev:amd64', 'libboost-iostreams1.67.0:amd64', 'libboost-math-dev:amd64', 'libboost-math1.67-dev:amd64', 'libboost-math1.67.0:amd64', 'libboost-mpi-dev', 'libboost-mpi1.67-dev', 'libboost-mpi1.67.0', 'libboost-program-options-dev:amd64', 'libboost-program-options1.67-dev:amd64', 'libboost-program-options1.67.0:amd64', 'libboost-regex1.67-dev:amd64', 'libboost-regex1.67.0:amd64', 'libboost-serialization-dev:amd64', 'libboost-serialization1.67-dev:amd64', 'libboost-serialization1.67.0:amd64', 'libboost-system1.67-dev:amd64', 'libboost-system1.67.0:amd64', 'libboost-thread-dev:amd64', 'libboost-thread1.67-dev:amd64', 'libboost-thread1.67.0:amd64', 'libboost-timer-dev:amd64', 'libboost-timer1.67-dev:amd64', 'libboost-timer1.67.0:amd64', 'libboost1.67-dev:amd64', 'libbsd0:amd64', 'libbtf1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcamd2:amd64', 'libcc1-0:amd64', 'libccolamd2:amd64', 'libcholmod3:amd64', 'libcolamd2:amd64', 'libcombblas1.16.0:amd64', 'libcurl4:amd64', 'libcxsparse3:amd64', 'libdolfin-dev', 'libdolfin2018.1:amd64', 'libdpkg-perl', 'libedit2:amd64', 'libeigen3-dev', 'libevent-2.1-6:amd64', 'libevent-core-2.1-6:amd64', 'libevent-pthreads-2.1-6:amd64', 'libexpat1:amd64', 'libfabric1', 'libfftw3-bin', 'libfftw3-dev:amd64', 'libfftw3-double3:amd64', 'libfftw3-long3:amd64', 'libfftw3-mpi-dev:amd64', 'libfftw3-mpi3:amd64', 'libfftw3-quad3:amd64', 'libfftw3-single3:amd64', 'libgcc-8-dev:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran-8-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphblas2:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-mpi-dev', 'libhdf5-openmpi-103:amd64', 'libhdf5-openmpi-dev', 'libhwloc-dev:amd64', 'libhwloc-plugins:amd64', 'libhwloc5:amd64', 'libhypre-2.15.1:amd64', 'libhypre-dev:amd64', 'libibverbs-dev:amd64', 'libibverbs1:amd64', 'libicu-dev:amd64', 'libicu63:amd64', 'libisl19:amd64', 'libitm1:amd64', 'libjpeg-dev', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-mathjax', 'libjsoncpp1:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libklu1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libldl2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmetis5:amd64', 'libmongoose2:amd64', 'libmpc3:amd64', 'libmpdec2:amd64', 'libmpfr6:amd64', 'libmpx2:amd64', 'libmumps-5.1.2:amd64', 'libmumps-dev:amd64', 'libncurses6:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-3-dev:amd64', 'libnl-route-3-200:amd64', 'libnl-route-3-dev:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev:amd64', 'libopenmpi3:amd64', 'libparpack2:amd64', 'libparpack2-dev:amd64', 'libpciaccess0:amd64', 'libperl5.28:amd64', 'libpetsc-real3.10:amd64', 'libpetsc-real3.10-dev:amd64', 'libpetsc3.10-dev-common', 'libpmix2:amd64', 'libprocps7:amd64', 'libpsl5:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptscotch-6.0', 'libptscotch-dev', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libpython3-stdlib:amd64', 'libpython3.7-minimal:amd64', 'libpython3.7-stdlib:amd64', 'libquadmath0:amd64', 'librbio2:amd64', 'librdmacm1:amd64', 'libreadline7:amd64', 'librhash0:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libscalapack-mpi-dev', 'libscalapack-openmpi-dev', 'libscalapack-openmpi2.0', 'libscotch-6.0', 'libscotch-dev', 'libsigsegv2:amd64', 'libslepc-real3.10', 'libslepc-real3.10-dev', 'libspqr2:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl-dev:amd64', 'libssl1.1:amd64', 'libstdc++-8-dev:amd64', 'libsuitesparse-dev:amd64', 'libsuitesparseconfig5:amd64', 'libsuperlu-dev:amd64', 'libsuperlu-dist-dev:amd64', 'libsuperlu-dist6:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libumfpack5:amd64', 'libuv1:amd64', 'libxml2:amd64', 'libxml2-dev:amd64', 'linux-libc-dev:amd64', 'lsb-base', 'm4', 'mime-support', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'perl', 'perl-modules-5.28', 'pkg-config', 'procps', 'pybind11-dev', 'python', 'python-minimal', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'python3', 'python3-dijitso', 'python3-dolfin', 'python3-ffc', 'python3-fiat', 'python3-minimal', 'python3-mpi4py', 'python3-mpmath', 'python3-numpy', 'python3-petsc4py', 'python3-petsc4py-real', 'python3-pkg-resources', 'python3-pkgconfig', 'python3-ply', 'python3-pybind11', 'python3-six', 'python3-slepc4py', 'python3-slepc4py-real', 'python3-sympy', 'python3-ufl', 'python3.7', 'python3.7-minimal', 'readline-common', 'swig', 'swig3.0', 'zlib1g-dev:amd64'] 1m44.9s DUMP: (Reading database ... 6512 files and directories currently installed.) Purging configuration files for autoconf (2.69-11) ... dpkg: warning: ignoring request to remove automake which isn't installed dpkg: warning: ignoring request to remove autotools-dev which isn't installed dpkg: warning: ignoring request to remove binutils which isn't installed dpkg: warning: ignoring request to remove binutils-common which isn't installed dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove cmake which isn't installed Purging configuration files for cmake-data (3.13.4-1) ... dpkg: warning: ignoring request to remove cpp which isn't installed dpkg: warning: ignoring request to remove cpp-8 which isn't installed dpkg: warning: ignoring request to remove fonts-mathjax which isn't installed dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-8 which isn't installed dpkg: warning: ignoring request to remove gfortran which isn't 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isn't installed dpkg: warning: ignoring request to remove libboost-iostreams-dev which isn't installed dpkg: warning: ignoring request to remove libboost-iostreams1.67-dev which isn't installed dpkg: warning: ignoring request to remove libboost-iostreams1.67.0 which isn't installed dpkg: warning: ignoring request to remove libboost-math-dev which isn't installed dpkg: warning: ignoring request to remove libboost-math1.67-dev which isn't installed dpkg: warning: ignoring request to remove libboost-math1.67.0 which isn't installed dpkg: warning: ignoring request to remove libboost-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libboost-mpi1.67-dev which isn't installed dpkg: warning: ignoring request to remove libboost-mpi1.67.0 which isn't installed dpkg: warning: ignoring request to remove libboost-program-options-dev which isn't installed dpkg: warning: ignoring request to remove libboost-program-options1.67-dev which isn't installed dpkg: warning: ignoring 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libboost-timer-dev which isn't installed dpkg: warning: ignoring request to remove libboost-timer1.67-dev which isn't installed dpkg: warning: ignoring request to remove libboost-timer1.67.0 which isn't installed dpkg: warning: ignoring request to remove libboost1.67-dev which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libbtf1 which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcamd2 which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed dpkg: warning: ignoring request to remove libccolamd2 which isn't installed dpkg: warning: ignoring request to remove libcholmod3 which isn't installed dpkg: warning: ignoring request to remove libcolamd2 which isn't installed dpkg: warning: ignoring request to 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ignoring request to remove libfftw3-bin which isn't installed dpkg: warning: ignoring request to remove libfftw3-dev which isn't installed dpkg: warning: ignoring request to remove libfftw3-double3 which isn't installed dpkg: warning: ignoring request to remove libfftw3-long3 which isn't installed dpkg: warning: ignoring request to remove libfftw3-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libfftw3-mpi3 which isn't installed dpkg: warning: ignoring request to remove libfftw3-quad3 which isn't installed dpkg: warning: ignoring request to remove libfftw3-single3 which isn't installed dpkg: warning: ignoring request to remove libgcc-8-dev which isn't installed dpkg: warning: ignoring request to remove libgdbm-compat4 which isn't installed dpkg: warning: ignoring request to remove libgdbm6 which isn't installed dpkg: warning: ignoring request to remove libgfortran-8-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.58.3-2+deb10u3) ... dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgraphblas2 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... dpkg: warning: ignoring request to remove libhdf5-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libhdf5-openmpi-103 which isn't installed dpkg: warning: ignoring request to remove libhdf5-openmpi-dev which isn't installed dpkg: warning: ignoring request to remove libhwloc-dev which isn't installed dpkg: warning: ignoring request to remove libhwloc-plugins which isn't installed dpkg: warning: ignoring request to remove libhwloc5 which isn't installed dpkg: warning: ignoring request to remove libhypre-2.15.1 which isn't installed dpkg: warning: ignoring request to remove libhypre-dev which isn't installed dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed dpkg: warning: ignoring request to remove libibverbs1 which isn't installed dpkg: warning: ignoring request to remove libicu-dev which isn't installed dpkg: warning: ignoring request to remove libicu63 which isn't installed dpkg: warning: ignoring request to remove libisl19 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjpeg-dev which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo-dev which isn't installed dpkg: warning: ignoring request to remove libjs-jquery which isn't installed Purging configuration files for libjs-jquery-ui (1.12.1+dfsg-5) ... dpkg: warning: ignoring request to remove libjs-mathjax which isn't installed dpkg: warning: ignoring request to remove libjsoncpp1 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libklu1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack-dev which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libldap-2.4-2 which isn't installed Purging configuration files for libldap-common (2.4.47+dfsg-3+deb10u7) ... dpkg: warning: ignoring request to remove libldl2 which isn't installed dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove libltdl-dev which isn't installed dpkg: warning: ignoring request to remove libltdl7 which isn't installed dpkg: warning: ignoring request to remove libmetis5 which isn't installed dpkg: warning: ignoring request to remove libmongoose2 which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpdec2 which isn't installed dpkg: warning: ignoring request to remove libmpfr6 which isn't installed dpkg: warning: ignoring request to remove libmpx2 which isn't installed dpkg: warning: ignoring request to remove libmumps-5.1.2 which isn't installed dpkg: warning: ignoring request to remove libmumps-dev which isn't installed dpkg: warning: ignoring request to remove libncurses6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed Purging configuration files for libnl-3-200:amd64 (3.4.0-1) ... dpkg: warning: ignoring request to remove libnl-3-dev which isn't installed dpkg: warning: ignoring request to remove libnl-route-3-200 which isn't installed dpkg: warning: ignoring request to remove libnl-route-3-dev which isn't installed dpkg: warning: ignoring request to remove libnuma-dev which isn't installed dpkg: warning: ignoring request to remove libnuma1 which isn't installed Purging configuration files for libopenmpi-dev:amd64 (3.1.3-11) ... dpkg: warning: ignoring request to remove libopenmpi3 which isn't installed dpkg: warning: ignoring request to remove libparpack2 which isn't installed dpkg: warning: ignoring request to remove libparpack2-dev which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libperl5.28 which isn't installed dpkg: warning: ignoring request to remove libpetsc-real3.10 which isn't installed dpkg: warning: ignoring request to remove libpetsc-real3.10-dev which isn't installed dpkg: warning: ignoring request to remove libpetsc3.10-dev-common which isn't installed dpkg: warning: ignoring request to remove libpmix2 which isn't installed dpkg: warning: ignoring request to remove libprocps7 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed Purging configuration files for libpsm-infinipath1 (3.3+20.604758e7-6) ... dpkg: warning: ignoring request to remove libpsm2-2 which isn't installed dpkg: warning: ignoring request to remove libptscotch-6.0 which isn't installed dpkg: warning: ignoring request to remove libptscotch-dev which isn't installed dpkg: warning: ignoring request to remove libpython-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython2-stdlib which isn't installed Purging configuration files for libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... dpkg: warning: ignoring request to remove libpython2.7-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed Purging configuration files for libpython3.7-minimal:amd64 (3.7.3-2+deb10u3) ... dpkg: warning: ignoring request to remove libpython3.7-stdlib which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove librbio2 which isn't installed dpkg: warning: ignoring request to remove librdmacm1 which isn't installed dpkg: warning: ignoring request to remove libreadline7 which isn't installed dpkg: warning: ignoring request to remove librhash0 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libscalapack-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libscalapack-openmpi-dev which isn't installed dpkg: warning: ignoring request to remove libscalapack-openmpi2.0 which isn't installed dpkg: warning: ignoring request to remove libscotch-6.0 which isn't installed dpkg: warning: ignoring request to remove libscotch-dev which isn't installed dpkg: warning: ignoring request to remove libsigsegv2 which isn't installed dpkg: warning: ignoring request to remove libslepc-real3.10 which isn't installed dpkg: warning: ignoring request to remove libslepc-real3.10-dev which isn't installed dpkg: warning: ignoring request to remove libspqr2 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libssl-dev which isn't installed Purging configuration files for libssl1.1:amd64 (1.1.1n-0+deb10u3) ... dpkg: warning: ignoring request to remove libstdc++-8-dev which isn't installed dpkg: warning: ignoring request to remove libsuitesparse-dev which isn't installed dpkg: warning: ignoring request to remove libsuitesparseconfig5 which isn't installed dpkg: warning: ignoring request to remove libsuperlu-dev which isn't installed dpkg: warning: ignoring request to remove libsuperlu-dist-dev which isn't installed dpkg: warning: ignoring request to remove libsuperlu-dist6 which isn't installed dpkg: warning: ignoring request to remove libsuperlu5 which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed dpkg: warning: ignoring request to remove libtsan0 which isn't installed dpkg: warning: ignoring request to remove libubsan1 which isn't installed dpkg: warning: ignoring request to remove libumfpack5 which isn't installed dpkg: warning: ignoring request to remove libuv1 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxml2-dev which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed dpkg: warning: ignoring request to remove lsb-base which isn't installed dpkg: warning: ignoring request to remove m4 which isn't installed Purging configuration files for mime-support (3.62) ... dpkg: warning: ignoring request to remove mpi-default-bin which isn't installed dpkg: warning: ignoring request to remove mpi-default-dev which isn't installed dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which isn't installed Purging configuration files for openmpi-bin (3.1.3-11) ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed Purging configuration files for openssh-client (1:7.9p1-10+deb10u2) ... dpkg: warning: while removing openssh-client, directory '/usr/lib/systemd' not empty so not removed Purging configuration files for perl (5.28.1-6+deb10u1) ... dpkg: warning: ignoring request to remove perl-modules-5.28 which isn't installed Purging configuration files for pkg-config (0.29-6) ... Purging configuration files for procps (2:3.3.15-2) ... dpkg: warning: ignoring request to remove pybind11-dev which isn't installed Purging configuration files for python (2.7.16-1) ... dpkg: warning: ignoring request to remove python-minimal which isn't installed dpkg: warning: ignoring request to remove python2 which isn't installed dpkg: warning: ignoring request to remove python2-minimal which isn't installed dpkg: warning: ignoring request to remove python2.7 which isn't installed Purging configuration files for python2.7-minimal (2.7.16-2+deb10u1) ... Purging configuration files for python3 (3.7.3-1) ... dpkg: warning: ignoring request to remove python3-dijitso which isn't installed dpkg: warning: ignoring request to remove python3-dolfin which isn't installed dpkg: warning: ignoring request to remove python3-ffc which isn't installed dpkg: warning: ignoring request to remove python3-fiat which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-mpi4py which isn't installed dpkg: warning: ignoring request to remove python3-mpmath which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-petsc4py which isn't installed dpkg: warning: ignoring request to remove python3-petsc4py-real which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-pkgconfig which isn't installed dpkg: warning: ignoring request to remove python3-ply which isn't installed dpkg: warning: ignoring request to remove python3-pybind11 which isn't installed dpkg: warning: ignoring request to remove python3-six which isn't installed dpkg: warning: ignoring request to remove python3-slepc4py which isn't installed dpkg: warning: ignoring request to remove python3-slepc4py-real which isn't installed Purging configuration files for python3-sympy (1.3-2) ... dpkg: warning: ignoring request to remove python3-ufl which isn't installed dpkg: warning: ignoring request to remove python3.7 which isn't installed Purging configuration files for python3.7-minimal (3.7.3-2+deb10u3) ... Purging configuration files for readline-common (7.0-5) ... dpkg: warning: ignoring request to remove swig which isn't installed dpkg: warning: ignoring request to remove swig3.0 which isn't installed dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed 1m44.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg', '--purge', 'autoconf', 'automake', 'autotools-dev', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cmake', 'cmake-data', 'cpp', 'cpp-8', 'fonts-mathjax', 'gcc', 'gcc-8', 'gfortran', 'gfortran-8', 'ibverbs-providers:amd64', 'icu-devtools', 'libaec-dev:amd64', 'libaec0:amd64', 'libamd2:amd64', 'libarchive13:amd64', 'libarpack2:amd64', 'libarpack2-dev:amd64', 'libasan5:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libboost-atomic1.67-dev:amd64', 'libboost-atomic1.67.0:amd64', 'libboost-chrono-dev:amd64', 'libboost-chrono1.67-dev:amd64', 'libboost-chrono1.67.0:amd64', 'libboost-date-time1.67-dev:amd64', 'libboost-date-time1.67.0:amd64', 'libboost-dev:amd64', 'libboost-filesystem-dev:amd64', 'libboost-filesystem1.67-dev:amd64', 'libboost-filesystem1.67.0:amd64', 'libboost-iostreams-dev:amd64', 'libboost-iostreams1.67-dev:amd64', 'libboost-iostreams1.67.0:amd64', 'libboost-math-dev:amd64', 'libboost-math1.67-dev:amd64', 'libboost-math1.67.0:amd64', 'libboost-mpi-dev', 'libboost-mpi1.67-dev', 'libboost-mpi1.67.0', 'libboost-program-options-dev:amd64', 'libboost-program-options1.67-dev:amd64', 'libboost-program-options1.67.0:amd64', 'libboost-regex1.67-dev:amd64', 'libboost-regex1.67.0:amd64', 'libboost-serialization-dev:amd64', 'libboost-serialization1.67-dev:amd64', 'libboost-serialization1.67.0:amd64', 'libboost-system1.67-dev:amd64', 'libboost-system1.67.0:amd64', 'libboost-thread-dev:amd64', 'libboost-thread1.67-dev:amd64', 'libboost-thread1.67.0:amd64', 'libboost-timer-dev:amd64', 'libboost-timer1.67-dev:amd64', 'libboost-timer1.67.0:amd64', 'libboost1.67-dev:amd64', 'libbsd0:amd64', 'libbtf1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcamd2:amd64', 'libcc1-0:amd64', 'libccolamd2:amd64', 'libcholmod3:amd64', 'libcolamd2:amd64', 'libcombblas1.16.0:amd64', 'libcurl4:amd64', 'libcxsparse3:amd64', 'libdolfin-dev', 'libdolfin2018.1:amd64', 'libdpkg-perl', 'libedit2:amd64', 'libeigen3-dev', 'libevent-2.1-6:amd64', 'libevent-core-2.1-6:amd64', 'libevent-pthreads-2.1-6:amd64', 'libexpat1:amd64', 'libfabric1', 'libfftw3-bin', 'libfftw3-dev:amd64', 'libfftw3-double3:amd64', 'libfftw3-long3:amd64', 'libfftw3-mpi-dev:amd64', 'libfftw3-mpi3:amd64', 'libfftw3-quad3:amd64', 'libfftw3-single3:amd64', 'libgcc-8-dev:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran-8-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphblas2:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-mpi-dev', 'libhdf5-openmpi-103:amd64', 'libhdf5-openmpi-dev', 'libhwloc-dev:amd64', 'libhwloc-plugins:amd64', 'libhwloc5:amd64', 'libhypre-2.15.1:amd64', 'libhypre-dev:amd64', 'libibverbs-dev:amd64', 'libibverbs1:amd64', 'libicu-dev:amd64', 'libicu63:amd64', 'libisl19:amd64', 'libitm1:amd64', 'libjpeg-dev', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-mathjax', 'libjsoncpp1:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libklu1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libldl2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmetis5:amd64', 'libmongoose2:amd64', 'libmpc3:amd64', 'libmpdec2:amd64', 'libmpfr6:amd64', 'libmpx2:amd64', 'libmumps-5.1.2:amd64', 'libmumps-dev:amd64', 'libncurses6:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-3-dev:amd64', 'libnl-route-3-200:amd64', 'libnl-route-3-dev:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev:amd64', 'libopenmpi3:amd64', 'libparpack2:amd64', 'libparpack2-dev:amd64', 'libpciaccess0:amd64', 'libperl5.28:amd64', 'libpetsc-real3.10:amd64', 'libpetsc-real3.10-dev:amd64', 'libpetsc3.10-dev-common', 'libpmix2:amd64', 'libprocps7:amd64', 'libpsl5:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptscotch-6.0', 'libptscotch-dev', 'libpython-stdlib:amd64', 'libpython2-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libpython3-stdlib:amd64', 'libpython3.7-minimal:amd64', 'libpython3.7-stdlib:amd64', 'libquadmath0:amd64', 'librbio2:amd64', 'librdmacm1:amd64', 'libreadline7:amd64', 'librhash0:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libscalapack-mpi-dev', 'libscalapack-openmpi-dev', 'libscalapack-openmpi2.0', 'libscotch-6.0', 'libscotch-dev', 'libsigsegv2:amd64', 'libslepc-real3.10', 'libslepc-real3.10-dev', 'libspqr2:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl-dev:amd64', 'libssl1.1:amd64', 'libstdc++-8-dev:amd64', 'libsuitesparse-dev:amd64', 'libsuitesparseconfig5:amd64', 'libsuperlu-dev:amd64', 'libsuperlu-dist-dev:amd64', 'libsuperlu-dist6:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libumfpack5:amd64', 'libuv1:amd64', 'libxml2:amd64', 'libxml2-dev:amd64', 'linux-libc-dev:amd64', 'lsb-base', 'm4', 'mime-support', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'perl', 'perl-modules-5.28', 'pkg-config', 'procps', 'pybind11-dev', 'python', 'python-minimal', 'python2', 'python2-minimal', 'python2.7', 'python2.7-minimal', 'python3', 'python3-dijitso', 'python3-dolfin', 'python3-ffc', 'python3-fiat', 'python3-minimal', 'python3-mpi4py', 'python3-mpmath', 'python3-numpy', 'python3-petsc4py', 'python3-petsc4py-real', 'python3-pkg-resources', 'python3-pkgconfig', 'python3-ply', 'python3-pybind11', 'python3-six', 'python3-slepc4py', 'python3-slepc4py-real', 'python3-sympy', 'python3-ufl', 'python3.7', 'python3.7-minimal', 'readline-common', 'swig', 'swig3.0', 'zlib1g-dev:amd64'] 1m44.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg', '--purge', 'dolfin-doc'] 1m44.9s DUMP: dpkg: warning: ignoring request to remove dolfin-doc which isn't installed 1m44.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg', '--purge', 'dolfin-doc'] 1m44.9s INFO: Running scripts post_purge 1m44.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_purge_exceptions'] 1m44.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_purge_exceptions'] 1m44.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg', '--purge', '--pending'] 1m44.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg', '--purge', '--pending'] 1m44.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg', '--remove', '--pending'] 1m44.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg', '--remove', '--pending'] 1m44.9s INFO: Running scripts post_test 1m44.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_test_exceptions'] 1m45.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'tmp/scripts/post_test_exceptions'] 1m45.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 1m45.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 1m46.3s DEBUG: No broken symlinks as far as we can find. 1m46.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg-divert', '--list'] 1m46.3s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m46.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'dpkg-divert', '--list'] 1m46.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', 'clean'] 1m46.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0', 'apt-get', 'clean'] 1m46.4s DEBUG: Recording chroot state 1m47.1s INFO: PASS: Installation and purging test. 1m47.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/shm'] 1m47.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/shm'] 1m47.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/console'] 1m47.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/console'] 1m47.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/ptmx'] 1m47.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/ptmx'] 1m47.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/pts'] 1m47.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/dev/pts'] 1m47.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/proc'] 1m47.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0/proc'] 1m47.7s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 1m47.8s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpv4la8yf0'] 1m47.8s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpv4la8yf0 1m47.9s INFO: PASS: All tests. 1m47.9s INFO: piuparts run ends. ret=0 End: 2024-07-27 15:15:40 GMT