Start: 2023-08-03 18:46:34 GMT [buster] Package: emboss Source: emboss (6.6.0+dfsg-7) Version: 6.6.0+dfsg-7+b1 Installed-Size: 5867 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (= 6.6.0+dfsg-7+b1), libc6 (>= 2.15), libexpat1 (>= 2.0.1), libgd3 (>= 2.1.0~alpha~), libhpdf-2.3.0 (>= 2.3.0), libmariadb3 (>= 3.0.0), libpng16-16 (>= 1.6.2-1), libpq5, libssl1.1 (>= 1.1.0), libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.6.0+dfsg-7) Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Description: European molecular biology open software suite Homepage: http://emboss.sourceforge.net Description-md5: 631f0b40fa19ed8d24d0b67284b2cdaa Tag: field::biology, field::biology:bioinformatics, field::biology:molecular, implemented-in::c, interface::commandline, role::program, scope::suite, scope::utility, use::analysing, use::comparing, use::converting, use::editing, use::organizing, use::searching, use::text-formatting, use::typesetting, use::viewing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO, works-with::db, works-with::text Section: science Priority: optional Filename: pool/main/e/emboss/emboss_6.6.0+dfsg-7+b1_amd64.deb Size: 1072968 MD5sum: aba1f06aeb22a03e8b7f0c0af4b3195c SHA256: 5b848fb0adacffc339150a6c247b588ab09e9e4c149051e13a47901266eb7acf [buster-next] Package: emboss Source: emboss (6.6.0+dfsg-7) Version: 6.6.0+dfsg-7+b1 Installed-Size: 5867 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (= 6.6.0+dfsg-7+b1), libc6 (>= 2.15), libexpat1 (>= 2.0.1), libgd3 (>= 2.1.0~alpha~), libhpdf-2.3.0 (>= 2.3.0), libmariadb3 (>= 3.0.0), libpng16-16 (>= 1.6.2-1), libpq5, libssl1.1 (>= 1.1.0), libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.6.0+dfsg-7) Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Description: European molecular biology open software suite Homepage: http://emboss.sourceforge.net Description-md5: 631f0b40fa19ed8d24d0b67284b2cdaa Tag: field::biology, field::biology:bioinformatics, field::biology:molecular, implemented-in::c, interface::commandline, role::program, scope::suite, scope::utility, use::analysing, use::comparing, use::converting, use::editing, use::organizing, use::searching, use::text-formatting, use::typesetting, use::viewing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO, works-with::db, works-with::text Section: science Priority: optional Filename: pool/main/e/emboss/emboss_6.6.0+dfsg-7+b1_amd64.deb Size: 1072968 MD5sum: aba1f06aeb22a03e8b7f0c0af4b3195c SHA256: 5b848fb0adacffc339150a6c247b588ab09e9e4c149051e13a47901266eb7acf Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz -d buster -d buster-next -B /srv/piuparts.debian.org/slave/refchroot/buster2next/reference-chroot-metadata.dat --apt emboss=6.6.0+dfsg-7+b1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.8~202306121314~1.1.7-9-g57dfbde6 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz -d buster -d buster-next -B /srv/piuparts.debian.org/slave/refchroot/buster2next/reference-chroot-metadata.dat --apt emboss=6.6.0+dfsg-7+b1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-23-amd64 #1 SMP Debian 5.10.179-3 (2023-07-27) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp71d6ojin 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp71d6ojin 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz'] 0m1.9s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/proc'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/proc'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/pts'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/pts'] 0m1.9s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/ptmx'] 0m1.9s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/ptmx'] 0m1.9s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/console'] 0m2.0s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/console'] 0m2.0s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/shm'] 0m2.0s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/shm'] 0m2.0s DEBUG: sources.list: deb http://deb.debian.org/debian/ buster main 0m2.0s DEBUG: Created policy-rc.d and chmodded it. 0m2.0s DEBUG: Created resolv.conf. 0m2.0s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp71d6ojin/tmp/scripts/ 0m2.0s INFO: Running scripts post_chroot_unpack 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', 'update'] 0m3.1s DUMP: Hit:1 http://deb.debian.org/debian buster InRelease Reading package lists... 0m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', 'update'] 0m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-yf', 'dist-upgrade'] 0m3.5s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-yf', 'dist-upgrade'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s DUMP: f6fc0f2636004ef589309651dfd778f4 - 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s INFO: Running scripts post_setup 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_dummy_users'] 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_dummy_users'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_forbid_home'] 0m5.0s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_forbid_home'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.1s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_minimize'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_minimize'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_zz_backports'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_setup_zz_backports'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.1s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 1.8.2.3 install ok installed base-files base-files 10.3+deb10u13 install ok installed base-passwd base-passwd 3.5.46 install ok installed bash bash 5.0-4 install ok installed bsdutils bsdutils 1:2.33.1-0.1 install ok installed coreutils coreutils 8.30-3 install ok installed dash dash 0.5.10.2-5 install ok installed debconf debconf 1.5.71+deb10u1 install ok installed debian-archive-keyring debian-archive-keyring 2019.1+deb10u1 install ok installed debianutils debianutils 4.8.6.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.8 install ok installed e2fsprogs e2fsprogs 1.44.5-1+deb10u3 install ok installed fdisk fdisk 2.33.1-0.1 install ok installed findutils findutils 4.6.0+git+20190209-2 install ok installed gcc-8-base:amd64 gcc-8-base 8.3.0-6 install ok installed gpgv gpgv 2.2.12-1+deb10u2 install ok installed grep grep 3.3-1 install ok installed gzip gzip 1.9-3+deb10u1 install ok installed hostname hostname 3.21 install ok installed init-system-helpers init-system-helpers 1.56+nmu1 install ok installed libacl1:amd64 libacl1 2.2.53-4 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.3 install ok installed libattr1:amd64 libattr1 1:2.4.48-4 install ok installed libaudit-common libaudit-common 1:2.8.4-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.4-3 install ok installed libblkid1:amd64 libblkid1 2.33.1-0.1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u1 install ok installed libc-bin libc-bin 2.28-10+deb10u1 install ok installed libc6:amd64 libc6 2.28-10+deb10u1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5+deb10u1 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4+deb10u1 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u8 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1+deb10u1 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1+deb10u1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+deb10u1 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u2 install ok installed libnettle6:amd64 libnettle6 3.4.1-1+deb10u1 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2+deb10u1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u8 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u2 install ok installed libudev1:amd64 libudev1 241-7~deb10u8 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3+deb10u2 install ok installed login login 1:4.5-1.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.33.1-0.1 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u2 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u2 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed tzdata tzdata 2021a-0+deb10u6 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1+deb10u1 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.1s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/buster2next/reference-chroot-metadata.dat 0m5.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m5.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m5.5s INFO: Running scripts is_testable 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/is_testable_uninstallable'] 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/is_testable_uninstallable'] 0m5.6s INFO: Running scripts pre_test 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_test_exceptions'] 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_test_exceptions'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_test_root_password'] 0m5.6s DUMP: New password: Retype new password: passwd: password updated successfully 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_test_root_password'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 0m5.9s DUMP: Package: emboss Source: emboss (6.6.0+dfsg-7) Version: 6.6.0+dfsg-7+b1 Installed-Size: 5867 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (= 6.6.0+dfsg-7+b1), libc6 (>= 2.15), libexpat1 (>= 2.0.1), libgd3 (>= 2.1.0~alpha~), libhpdf-2.3.0 (>= 2.3.0), libmariadb3 (>= 3.0.0), libpng16-16 (>= 1.6.2-1), libpq5, libssl1.1 (>= 1.1.0), libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.6.0+dfsg-7) Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Description-en: European molecular biology open software suite EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages. Description-md5: 631f0b40fa19ed8d24d0b67284b2cdaa Homepage: http://emboss.sourceforge.net Tag: field::biology, field::biology:bioinformatics, field::biology:molecular, implemented-in::c, interface::commandline, role::program, scope::suite, scope::utility, use::analysing, use::comparing, use::converting, use::editing, use::organizing, use::searching, use::text-formatting, use::typesetting, use::viewing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO, works-with::db, works-with::text Section: science Priority: optional Filename: pool/main/e/emboss/emboss_6.6.0+dfsg-7+b1_amd64.deb Size: 1072968 MD5sum: aba1f06aeb22a03e8b7f0c0af4b3195c SHA256: 5b848fb0adacffc339150a6c247b588ab09e9e4c149051e13a47901266eb7acf 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 0m5.9s INFO: apt-cache knows about the following packages: emboss 0m5.9s INFO: Running scripts pre_install 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_database-server'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_database-server'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_exceptions'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_exceptions'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_extras'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_extras'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy'] 0m6.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian buster/main amd64 Packages release v=10.13,o=Debian,a=oldoldstable,n=buster,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy', 'emboss'] 0m6.0s DUMP: emboss: Installed: (none) Candidate: 6.6.0+dfsg-7+b1 Version table: 6.6.0+dfsg-7+b1 500 500 http://deb.debian.org/debian buster/main amd64 Packages 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy', 'emboss'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-y', 'install', 'emboss'] 0m22.3s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: emboss-data emboss-lib fontconfig-config fonts-dejavu-core libbsd0 libexpat1 libfontconfig1 libfreetype6 libgd3 libgssapi-krb5-2 libhpdf-2.3.0 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libmariadb3 libpng16-16 libpq5 libsasl2-2 libsasl2-modules-db libssl1.1 libtiff5 libwebp6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxpm4 mariadb-common mysql-common sensible-utils ucf Suggested packages: emboss-doc emboss-test embassy clustalw libgd-tools krb5-doc krb5-user Recommended packages: primer3 dialign krb5-locales libsasl2-modules The following NEW packages will be installed: emboss emboss-data emboss-lib fontconfig-config fonts-dejavu-core libbsd0 libexpat1 libfontconfig1 libfreetype6 libgd3 libgssapi-krb5-2 libhpdf-2.3.0 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libmariadb3 libpng16-16 libpq5 libsasl2-2 libsasl2-modules-db libssl1.1 libtiff5 libwebp6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxpm4 mariadb-common mysql-common sensible-utils ucf 0 upgraded, 38 newly installed, 0 to remove and 0 not upgraded. Need to get 73.2 MB of archives. After this operation, 519 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:2 http://deb.debian.org/debian buster/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:3 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u4 [108 kB] Get:4 http://deb.debian.org/debian buster/main amd64 libpng16-16 amd64 1.6.36-6 [292 kB] Get:5 http://deb.debian.org/debian buster/main amd64 libfreetype6 amd64 2.9.1-3+deb10u3 [380 kB] Get:6 http://deb.debian.org/debian buster/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:7 http://deb.debian.org/debian buster/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get:8 http://deb.debian.org/debian buster/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB] Get:9 http://deb.debian.org/debian buster/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+deb10u1 [133 kB] Get:10 http://deb.debian.org/debian buster/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:11 http://deb.debian.org/debian buster/main amd64 libwebp6 amd64 0.6.1-2+deb10u1 [261 kB] Get:12 http://deb.debian.org/debian buster/main amd64 libtiff5 amd64 4.1.0+git191117-2~deb10u4 [271 kB] Get:13 http://deb.debian.org/debian buster/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:14 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get:15 http://deb.debian.org/debian buster/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:16 http://deb.debian.org/debian buster/main amd64 libxcb1 amd64 1.13.1-2 [137 kB] Get:17 http://deb.debian.org/debian buster/main amd64 libx11-data all 2:1.6.7-1+deb10u2 [299 kB] Get:18 http://deb.debian.org/debian buster/main amd64 libx11-6 amd64 2:1.6.7-1+deb10u2 [757 kB] Get:19 http://deb.debian.org/debian buster/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:20 http://deb.debian.org/debian buster/main amd64 libgd3 amd64 2.2.5-5.2 [136 kB] Get:21 http://deb.debian.org/debian buster/main amd64 libhpdf-2.3.0 amd64 2.3.0+dfsg-1 [340 kB] Get:22 http://deb.debian.org/debian buster/main amd64 mysql-common all 5.8+1.0.5 [7324 B] Get:23 http://deb.debian.org/debian buster/main amd64 mariadb-common all 1:10.3.34-0+deb10u1 [33.0 kB] Get:24 http://deb.debian.org/debian buster/main amd64 libmariadb3 amd64 1:10.3.34-0+deb10u1 [173 kB] Get:25 http://deb.debian.org/debian buster/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:26 http://deb.debian.org/debian buster/main amd64 libkrb5support0 amd64 1.17-3+deb10u4 [65.9 kB] Get:27 http://deb.debian.org/debian buster/main amd64 libk5crypto3 amd64 1.17-3+deb10u4 [122 kB] Get:28 http://deb.debian.org/debian buster/main amd64 libssl1.1 amd64 1.1.1n-0+deb10u3 [1551 kB] Get:29 http://deb.debian.org/debian buster/main amd64 libkrb5-3 amd64 1.17-3+deb10u4 [369 kB] Get:30 http://deb.debian.org/debian buster/main amd64 libgssapi-krb5-2 amd64 1.17-3+deb10u4 [158 kB] Get:31 http://deb.debian.org/debian buster/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1+deb10u2 [69.2 kB] Get:32 http://deb.debian.org/debian buster/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1+deb10u2 [106 kB] Get:33 http://deb.debian.org/debian buster/main amd64 libldap-common all 2.4.47+dfsg-3+deb10u7 [90.1 kB] Get:34 http://deb.debian.org/debian buster/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-3+deb10u7 [224 kB] Get:35 http://deb.debian.org/debian buster/main amd64 libpq5 amd64 11.16-0+deb10u1 [172 kB] Get:36 http://deb.debian.org/debian buster/main amd64 emboss-lib amd64 6.6.0+dfsg-7+b1 [2786 kB] Get:37 http://deb.debian.org/debian buster/main amd64 emboss-data all 6.6.0+dfsg-7 [61.1 MB] Get:38 http://deb.debian.org/debian buster/main amd64 emboss amd64 6.6.0+dfsg-7+b1 [1073 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 73.2 MB in 5s (14.4 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6462 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package ucf. Preparing to unpack .../01-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../02-libexpat1_2.2.6-2+deb10u4_amd64.deb ... Unpacking libexpat1:amd64 (2.2.6-2+deb10u4) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../03-libpng16-16_1.6.36-6_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.36-6) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../04-libfreetype6_2.9.1-3+deb10u3_amd64.deb ... Unpacking libfreetype6:amd64 (2.9.1-3+deb10u3) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../05-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../06-fontconfig-config_2.13.1-2_all.deb ... Unpacking fontconfig-config (2.13.1-2) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../07-libfontconfig1_2.13.1-2_amd64.deb ... Unpacking libfontconfig1:amd64 (2.13.1-2) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../08-libjpeg62-turbo_1%3a1.5.2-2+deb10u1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:1.5.2-2+deb10u1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../09-libjbig0_2.1-3.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1+b2) ... Selecting previously unselected package libwebp6:amd64. Preparing to unpack .../10-libwebp6_0.6.1-2+deb10u1_amd64.deb ... Unpacking libwebp6:amd64 (0.6.1-2+deb10u1) ... Selecting previously unselected package libtiff5:amd64. Preparing to unpack .../11-libtiff5_4.1.0+git191117-2~deb10u4_amd64.deb ... Unpacking libtiff5:amd64 (4.1.0+git191117-2~deb10u4) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../12-libxau6_1%3a1.0.8-1+b2_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.8-1+b2) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../13-libbsd0_0.9.1-2+deb10u1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2+deb10u1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../14-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../15-libxcb1_1.13.1-2_amd64.deb ... Unpacking libxcb1:amd64 (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../16-libx11-data_2%3a1.6.7-1+deb10u2_all.deb ... Unpacking libx11-data (2:1.6.7-1+deb10u2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../17-libx11-6_2%3a1.6.7-1+deb10u2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.6.7-1+deb10u2) ... Selecting previously unselected package libxpm4:amd64. Preparing to unpack .../18-libxpm4_1%3a3.5.12-1_amd64.deb ... Unpacking libxpm4:amd64 (1:3.5.12-1) ... Selecting previously unselected package libgd3:amd64. Preparing to unpack .../19-libgd3_2.2.5-5.2_amd64.deb ... Unpacking libgd3:amd64 (2.2.5-5.2) ... Selecting previously unselected package libhpdf-2.3.0:amd64. Preparing to unpack .../20-libhpdf-2.3.0_2.3.0+dfsg-1_amd64.deb ... Unpacking libhpdf-2.3.0:amd64 (2.3.0+dfsg-1) ... Selecting previously unselected package mysql-common. Preparing to unpack .../21-mysql-common_5.8+1.0.5_all.deb ... Unpacking mysql-common (5.8+1.0.5) ... Selecting previously unselected package mariadb-common. Preparing to unpack .../22-mariadb-common_1%3a10.3.34-0+deb10u1_all.deb ... Unpacking mariadb-common (1:10.3.34-0+deb10u1) ... Selecting previously unselected package libmariadb3:amd64. Preparing to unpack .../23-libmariadb3_1%3a10.3.34-0+deb10u1_amd64.deb ... Unpacking libmariadb3:amd64 (1:10.3.34-0+deb10u1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../24-libkeyutils1_1.6-6_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6-6) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../25-libkrb5support0_1.17-3+deb10u4_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-3+deb10u4) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../26-libk5crypto3_1.17-3+deb10u4_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-3+deb10u4) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../27-libssl1.1_1.1.1n-0+deb10u3_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1n-0+deb10u3) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../28-libkrb5-3_1.17-3+deb10u4_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-3+deb10u4) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../29-libgssapi-krb5-2_1.17-3+deb10u4_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../30-libsasl2-modules-db_2.1.27+dfsg-1+deb10u2_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-1+deb10u2) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../31-libsasl2-2_2.1.27+dfsg-1+deb10u2_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-1+deb10u2) ... Selecting previously unselected package libldap-common. Preparing to unpack .../32-libldap-common_2.4.47+dfsg-3+deb10u7_all.deb ... Unpacking libldap-common (2.4.47+dfsg-3+deb10u7) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../33-libldap-2.4-2_2.4.47+dfsg-3+deb10u7_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.47+dfsg-3+deb10u7) ... Selecting previously unselected package libpq5:amd64. Preparing to unpack .../34-libpq5_11.16-0+deb10u1_amd64.deb ... Unpacking libpq5:amd64 (11.16-0+deb10u1) ... Selecting previously unselected package emboss-lib. Preparing to unpack .../35-emboss-lib_6.6.0+dfsg-7+b1_amd64.deb ... Unpacking emboss-lib (6.6.0+dfsg-7+b1) ... Selecting previously unselected package emboss-data. Preparing to unpack .../36-emboss-data_6.6.0+dfsg-7_all.deb ... Unpacking emboss-data (6.6.0+dfsg-7) ... Selecting previously unselected package emboss. Preparing to unpack .../37-emboss_6.6.0+dfsg-7+b1_amd64.deb ... Unpacking emboss (6.6.0+dfsg-7+b1) ... Setting up libexpat1:amd64 (2.2.6-2+deb10u4) ... Setting up mysql-common (5.8+1.0.5) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up libkeyutils1:amd64 (1.6-6) ... Setting up libssl1.1:amd64 (1.1.1n-0+deb10u3) ... Setting up emboss-data (6.6.0+dfsg-7) ... Setting up libldap-common (2.4.47+dfsg-3+deb10u7) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libkrb5support0:amd64 (1.17-3+deb10u4) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-1+deb10u2) ... Setting up mariadb-common (1:10.3.34-0+deb10u1) ... update-alternatives: using /etc/mysql/mariadb.cnf to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+deb10u1) ... Setting up libx11-data (2:1.6.7-1+deb10u2) ... Setting up libpng16-16:amd64 (1.6.36-6) ... Setting up libwebp6:amd64 (0.6.1-2+deb10u1) ... Setting up libmariadb3:amd64 (1:10.3.34-0+deb10u1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libk5crypto3:amd64 (1.17-3+deb10u4) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-1+deb10u2) ... Setting up sensible-utils (0.0.12) ... Setting up libkrb5-3:amd64 (1.17-3+deb10u4) ... Setting up libtiff5:amd64 (4.1.0+git191117-2~deb10u4) ... Setting up libbsd0:amd64 (0.9.1-2+deb10u1) ... Setting up libhpdf-2.3.0:amd64 (2.3.0+dfsg-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-3+deb10u7) ... Setting up libfreetype6:amd64 (2.9.1-3+deb10u3) ... Setting up libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... Setting up ucf (3.0038+nmu1) ... Setting up libx11-6:amd64 (2:1.6.7-1+deb10u2) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libpq5:amd64 (11.16-0+deb10u1) ... Setting up libfontconfig1:amd64 (2.13.1-2) ... Setting up libgd3:amd64 (2.2.5-5.2) ... Setting up emboss-lib (6.6.0+dfsg-7+b1) ... Setting up emboss (6.6.0+dfsg-7+b1) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-y', 'install', 'emboss'] 0m22.3s INFO: Running scripts post_install 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_install_exceptions'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_install_exceptions'] 0m22.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m22.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m22.8s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp71d6ojin to buster-next 0m22.8s DEBUG: sources.list: deb http://deb.debian.org/debian/ buster main deb http://security.debian.org buster/updates main deb http://deb.debian.org/debian/ buster-updates main deb http://deb.debian.org/debian/ buster-proposed-updates main 0m22.8s INFO: Running scripts pre_distupgrade 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_exceptions'] 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_exceptions'] 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m22.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m22.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m22.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m22.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', 'update'] 0m25.0s DUMP: Hit:1 http://deb.debian.org/debian buster InRelease Get:2 http://security.debian.org buster/updates InRelease [34.8 kB] Get:3 http://deb.debian.org/debian buster-updates InRelease [56.6 kB] Get:4 http://deb.debian.org/debian buster-proposed-updates InRelease [59.2 kB] Get:5 http://security.debian.org buster/updates/main amd64 Packages [546 kB] Get:6 http://security.debian.org buster/updates/main Translation-en [295 kB] Get:7 http://deb.debian.org/debian buster-updates/main amd64 Packages [8788 B] Get:8 http://deb.debian.org/debian buster-updates/main Translation-en [6915 B] Get:9 http://deb.debian.org/debian buster-proposed-updates/main amd64 Packages [728 B] Get:10 http://deb.debian.org/debian buster-proposed-updates/main Translation-en [859 B] Fetched 1009 kB in 1s (1016 kB/s) Reading package lists... 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', 'update'] 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-yf', 'dist-upgrade'] 0m29.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: debian-archive-keyring libbz2-1.0 libc-bin libc6 libexpat1 libgnutls30 libgssapi-krb5-2 libk5crypto3 libkrb5-3 libkrb5support0 libmariadb3 libncursesw6 libpq5 libssl1.1 libsystemd0 libtasn1-6 libtiff5 libtinfo6 libudev1 libwebp6 libx11-6 libx11-data libxpm4 mariadb-common ncurses-base ncurses-bin tzdata zlib1g 28 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 11.4 MB of archives. After this operation, 66.6 kB of additional disk space will be used. Get:1 http://security.debian.org buster/updates/main amd64 ncurses-bin amd64 6.1+20181013-2+deb10u3 [407 kB] Get:2 http://security.debian.org buster/updates/main amd64 libc6 amd64 2.28-10+deb10u2 [2869 kB] Get:3 http://security.debian.org buster/updates/main amd64 libc-bin amd64 2.28-10+deb10u2 [793 kB] Get:4 http://security.debian.org buster/updates/main amd64 ncurses-base all 6.1+20181013-2+deb10u3 [259 kB] Get:5 http://security.debian.org buster/updates/main amd64 libsystemd0 amd64 241-7~deb10u10 [332 kB] Get:6 http://security.debian.org buster/updates/main amd64 zlib1g amd64 1:1.2.11.dfsg-1+deb10u2 [90.9 kB] Get:7 http://security.debian.org buster/updates/main amd64 debian-archive-keyring all 2019.1+deb10u2 [110 kB] Get:8 http://security.debian.org buster/updates/main amd64 libbz2-1.0 amd64 1.0.6-9.2~deb10u2 [45.4 kB] Get:9 http://security.debian.org buster/updates/main amd64 libudev1 amd64 241-7~deb10u10 [151 kB] Get:10 http://security.debian.org buster/updates/main amd64 libtasn1-6 amd64 4.13-3+deb10u1 [52.0 kB] Get:11 http://security.debian.org buster/updates/main amd64 libgnutls30 amd64 3.6.7-4+deb10u10 [1126 kB] Get:12 http://security.debian.org buster/updates/main amd64 libtinfo6 amd64 6.1+20181013-2+deb10u3 [326 kB] Get:13 http://security.debian.org buster/updates/main amd64 libncursesw6 amd64 6.1+20181013-2+deb10u3 [132 kB] Get:14 http://security.debian.org buster/updates/main amd64 tzdata all 2021a-0+deb10u11 [267 kB] Get:15 http://security.debian.org buster/updates/main amd64 libssl1.1 amd64 1.1.1n-0+deb10u5 [1551 kB] Get:16 http://security.debian.org buster/updates/main amd64 libgssapi-krb5-2 amd64 1.17-3+deb10u5 [159 kB] Get:17 http://security.debian.org buster/updates/main amd64 libkrb5-3 amd64 1.17-3+deb10u5 [369 kB] Get:18 http://security.debian.org buster/updates/main amd64 libkrb5support0 amd64 1.17-3+deb10u5 [66.0 kB] Get:19 http://security.debian.org buster/updates/main amd64 libk5crypto3 amd64 1.17-3+deb10u5 [122 kB] Get:20 http://security.debian.org buster/updates/main amd64 libexpat1 amd64 2.2.6-2+deb10u6 [108 kB] Get:21 http://security.debian.org buster/updates/main amd64 mariadb-common all 1:10.3.39-0+deb10u1 [33.5 kB] Get:22 http://security.debian.org buster/updates/main amd64 libmariadb3 amd64 1:10.3.39-0+deb10u1 [173 kB] Get:23 http://security.debian.org buster/updates/main amd64 libpq5 amd64 11.20-0+deb10u1 [173 kB] Get:24 http://security.debian.org buster/updates/main amd64 libwebp6 amd64 0.6.1-2+deb10u2 [262 kB] Get:25 http://security.debian.org buster/updates/main amd64 libtiff5 amd64 4.1.0+git191117-2~deb10u8 [273 kB] Get:26 http://security.debian.org buster/updates/main amd64 libx11-data all 2:1.6.7-1+deb10u3 [299 kB] Get:27 http://security.debian.org buster/updates/main amd64 libx11-6 amd64 2:1.6.7-1+deb10u3 [757 kB] Get:28 http://security.debian.org buster/updates/main amd64 libxpm4 amd64 1:3.5.12-1+deb10u1 [50.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 11.4 MB in 0s (52.5 MB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9161 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.1+20181013-2+deb10u3_amd64.deb ... Unpacking libncursesw6:amd64 (6.1+20181013-2+deb10u3) over (6.1+20181013-2+deb10u2) ... Setting up libncursesw6:amd64 (6.1+20181013-2+deb10u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9161 files and directories currently installed.) Preparing to unpack .../00-tzdata_2021a-0+deb10u11_all.deb ... Unpacking tzdata (2021a-0+deb10u11) over (2021a-0+deb10u6) ... Preparing to unpack .../01-libssl1.1_1.1.1n-0+deb10u5_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1n-0+deb10u5) over (1.1.1n-0+deb10u3) ... Preparing to unpack .../02-libgssapi-krb5-2_1.17-3+deb10u5_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-3+deb10u5) over (1.17-3+deb10u4) ... Preparing to unpack .../03-libkrb5-3_1.17-3+deb10u5_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-3+deb10u5) over (1.17-3+deb10u4) ... Preparing to unpack .../04-libkrb5support0_1.17-3+deb10u5_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-3+deb10u5) over (1.17-3+deb10u4) ... Preparing to unpack .../05-libk5crypto3_1.17-3+deb10u5_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-3+deb10u5) over (1.17-3+deb10u4) ... Preparing to unpack .../06-libexpat1_2.2.6-2+deb10u6_amd64.deb ... Unpacking libexpat1:amd64 (2.2.6-2+deb10u6) over (2.2.6-2+deb10u4) ... Preparing to unpack .../07-mariadb-common_1%3a10.3.39-0+deb10u1_all.deb ... Unpacking mariadb-common (1:10.3.39-0+deb10u1) over (1:10.3.34-0+deb10u1) ... Preparing to unpack .../08-libmariadb3_1%3a10.3.39-0+deb10u1_amd64.deb ... Unpacking libmariadb3:amd64 (1:10.3.39-0+deb10u1) over (1:10.3.34-0+deb10u1) ... Preparing to unpack .../09-libpq5_11.20-0+deb10u1_amd64.deb ... Unpacking libpq5:amd64 (11.20-0+deb10u1) over (11.16-0+deb10u1) ... Preparing to unpack .../10-libwebp6_0.6.1-2+deb10u2_amd64.deb ... Unpacking libwebp6:amd64 (0.6.1-2+deb10u2) over (0.6.1-2+deb10u1) ... Preparing to unpack .../11-libtiff5_4.1.0+git191117-2~deb10u8_amd64.deb ... Unpacking libtiff5:amd64 (4.1.0+git191117-2~deb10u8) over (4.1.0+git191117-2~deb10u4) ... Preparing to unpack .../12-libx11-data_2%3a1.6.7-1+deb10u3_all.deb ... Unpacking libx11-data (2:1.6.7-1+deb10u3) over (2:1.6.7-1+deb10u2) ... Preparing to unpack .../13-libx11-6_2%3a1.6.7-1+deb10u3_amd64.deb ... Unpacking libx11-6:amd64 (2:1.6.7-1+deb10u3) over (2:1.6.7-1+deb10u2) ... Preparing to unpack .../14-libxpm4_1%3a3.5.12-1+deb10u1_amd64.deb ... Unpacking libxpm4:amd64 (1:3.5.12-1+deb10u1) over (1:3.5.12-1) ... Setting up libexpat1:amd64 (2.2.6-2+deb10u6) ... Setting up libssl1.1:amd64 (1.1.1n-0+deb10u5) ... Setting up libkrb5support0:amd64 (1.17-3+deb10u5) ... Setting up tzdata (2021a-0+deb10u11) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Aug 3 18:47:04 UTC 2023. Universal Time is now: Thu Aug 3 18:47:04 UTC 2023. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up mariadb-common (1:10.3.39-0+deb10u1) ... Setting up libx11-data (2:1.6.7-1+deb10u3) ... Setting up libwebp6:amd64 (0.6.1-2+deb10u2) ... Setting up libmariadb3:amd64 (1:10.3.39-0+deb10u1) ... Setting up libk5crypto3:amd64 (1.17-3+deb10u5) ... Setting up libx11-6:amd64 (2:1.6.7-1+deb10u3) ... Setting up libkrb5-3:amd64 (1.17-3+deb10u5) ... Setting up libtiff5:amd64 (4.1.0+git191117-2~deb10u8) ... Setting up libxpm4:amd64 (1:3.5.12-1+deb10u1) ... Setting up libgssapi-krb5-2:amd64 (1.17-3+deb10u5) ... Setting up libpq5:amd64 (11.20-0+deb10u1) ... Processing triggers for libc-bin (2.28-10+deb10u2) ... 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-yf', 'dist-upgrade'] 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m30.1s DUMP: 4240687ef0bdbc4bdee8af6b58ebc0f6 - 0m30.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m30.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 0m30.3s DUMP: Package: emboss Source: emboss (6.6.0+dfsg-7) Version: 6.6.0+dfsg-7+b1 Installed-Size: 5867 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (= 6.6.0+dfsg-7+b1), libc6 (>= 2.15), libexpat1 (>= 2.0.1), libgd3 (>= 2.1.0~alpha~), libhpdf-2.3.0 (>= 2.3.0), libmariadb3 (>= 3.0.0), libpng16-16 (>= 1.6.2-1), libpq5, libssl1.1 (>= 1.1.0), libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.6.0+dfsg-7) Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Description-en: European molecular biology open software suite EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages. Description-md5: 631f0b40fa19ed8d24d0b67284b2cdaa Homepage: http://emboss.sourceforge.net Tag: field::biology, field::biology:bioinformatics, field::biology:molecular, implemented-in::c, interface::commandline, role::program, scope::suite, scope::utility, use::analysing, use::comparing, use::converting, use::editing, use::organizing, use::searching, use::text-formatting, use::typesetting, use::viewing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO, works-with::db, works-with::text Section: science Priority: optional Filename: pool/main/e/emboss/emboss_6.6.0+dfsg-7+b1_amd64.deb Size: 1072968 MD5sum: aba1f06aeb22a03e8b7f0c0af4b3195c SHA256: 5b848fb0adacffc339150a6c247b588ab09e9e4c149051e13a47901266eb7acf 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 0m30.3s INFO: apt-cache knows about the following packages: emboss 0m30.3s INFO: Running scripts pre_install 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_database-server'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_database-server'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_exceptions'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_exceptions'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_extras'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_extras'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy'] 0m30.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian buster-proposed-updates/main amd64 Packages release v=10-updates,o=Debian,a=oldoldstable-proposed-updates,n=buster-proposed-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian buster-updates/main amd64 Packages release o=Debian,a=oldoldstable-updates,n=buster-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://security.debian.org buster/updates/main amd64 Packages release v=10,o=Debian,a=oldoldstable,n=buster,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian buster/main amd64 Packages release v=10.13,o=Debian,a=oldoldstable,n=buster,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m30.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy'] 0m30.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy', 'emboss'] 0m30.5s DUMP: emboss: Installed: 6.6.0+dfsg-7+b1 Candidate: 6.6.0+dfsg-7+b1 Version table: *** 6.6.0+dfsg-7+b1 500 500 http://deb.debian.org/debian buster/main amd64 Packages 100 /var/lib/dpkg/status 0m30.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy', 'emboss'] 0m30.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-y', 'install', 'emboss'] 0m30.9s DUMP: Reading package lists... Building dependency tree... Reading state information... emboss is already the newest version (6.6.0+dfsg-7+b1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m30.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-y', 'install', 'emboss'] 0m30.9s INFO: Running scripts post_install 0m30.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_install_exceptions'] 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_install_exceptions'] 0m31.0s INFO: Running scripts post_distupgrade 0m31.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m31.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_exceptions'] 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_exceptions'] 0m31.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m31.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m31.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_zz_backports'] 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_distupgrade_zz_backports'] 0m31.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m31.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m31.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m31.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m31.8s INFO: Running scripts pre_install 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_database-server'] 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_database-server'] 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_exceptions'] 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_exceptions'] 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_extras'] 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_extras'] 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture'] 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture'] 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy'] 0m31.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian buster-proposed-updates/main amd64 Packages release v=10-updates,o=Debian,a=oldoldstable-proposed-updates,n=buster-proposed-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian buster-updates/main amd64 Packages release o=Debian,a=oldoldstable-updates,n=buster-updates,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://security.debian.org buster/updates/main amd64 Packages release v=10,o=Debian,a=oldoldstable,n=buster,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian buster/main amd64 Packages release v=10.13,o=Debian,a=oldoldstable,n=buster,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m31.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy'] 0m31.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy', 'emboss'] 0m31.9s DUMP: emboss: Installed: 6.6.0+dfsg-7+b1 Candidate: 6.6.0+dfsg-7+b1 Version table: *** 6.6.0+dfsg-7+b1 500 500 http://deb.debian.org/debian buster/main amd64 Packages 100 /var/lib/dpkg/status 0m31.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-cache', 'policy', 'emboss'] 0m31.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-y', 'install', 'emboss=6.6.0+dfsg-7+b1'] 0m32.4s DUMP: Reading package lists... Building dependency tree... Reading state information... emboss is already the newest version (6.6.0+dfsg-7+b1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m32.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', '-y', 'install', 'emboss=6.6.0+dfsg-7+b1'] 0m32.4s INFO: Running scripts post_install 0m32.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_install_exceptions'] 0m32.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_install_exceptions'] 0m32.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m32.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m33.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', '-ac', '--ignore-obsolete'] 0m35.3s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', '-ac', '--ignore-obsolete'] 0m35.3s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.3s DUMP: 0.15.6 0m35.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.3s INFO: Running adequate version 0.15.6 now. 0m35.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'emboss'] 0m46.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'emboss'] 0m46.1s INFO: Running scripts pre_remove 0m46.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m46.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m46.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m46.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m46.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m47.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m47.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m47.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m47.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m47.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m47.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_exceptions'] 0m48.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/pre_remove_exceptions'] 0m48.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m48.0s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 1.8.2.3 install ok installed base-files base-files 10.3+deb10u13 install ok installed base-passwd base-passwd 3.5.46 install ok installed bash bash 5.0-4 install ok installed bsdutils bsdutils 1:2.33.1-0.1 install ok installed coreutils coreutils 8.30-3 install ok installed dash dash 0.5.10.2-5 install ok installed debconf debconf 1.5.71+deb10u1 install ok installed debian-archive-keyring debian-archive-keyring 2019.1+deb10u2 install ok installed debianutils debianutils 4.8.6.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.8 install ok installed e2fsprogs e2fsprogs 1.44.5-1+deb10u3 install ok installed emboss emboss 6.6.0+dfsg-7+b1 install ok installed emboss-data emboss-data 6.6.0+dfsg-7 install ok installed emboss-lib emboss-lib 6.6.0+dfsg-7+b1 install ok installed fdisk fdisk 2.33.1-0.1 install ok installed findutils findutils 4.6.0+git+20190209-2 install ok installed fontconfig-config fontconfig-config 2.13.1-2 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-1 install ok installed gcc-8-base:amd64 gcc-8-base 8.3.0-6 install ok installed gpgv gpgv 2.2.12-1+deb10u2 install ok installed grep grep 3.3-1 install ok installed gzip gzip 1.9-3+deb10u1 install ok installed hostname hostname 3.21 install ok installed init-system-helpers init-system-helpers 1.56+nmu1 install ok installed libacl1:amd64 libacl1 2.2.53-4 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.3 install ok installed libattr1:amd64 libattr1 1:2.4.48-4 install ok installed libaudit-common libaudit-common 1:2.8.4-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.4-3 install ok installed libblkid1:amd64 libblkid1 2.33.1-0.1 install ok installed libbsd0:amd64 libbsd0 0.9.1-2+deb10u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u2 install ok installed libc-bin libc-bin 2.28-10+deb10u2 install ok installed libc6:amd64 libc6 2.28-10+deb10u2 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libexpat1:amd64 libexpat1 2.2.6-2+deb10u6 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libfontconfig1:amd64 libfontconfig1 2.13.1-2 install ok installed libfreetype6:amd64 libfreetype6 2.9.1-3+deb10u3 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5+deb10u1 install ok installed libgd3:amd64 libgd3 2.2.5-5.2 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4+deb10u1 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u10 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.17-3+deb10u5 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1+deb10u1 install ok installed libhpdf-2.3.0:amd64 libhpdf-2.3.0 2.3.0+dfsg-1 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed libjbig0:amd64 libjbig0 2.1-3.1+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:1.5.2-2+deb10u1 install ok installed libk5crypto3:amd64 libk5crypto3 1.17-3+deb10u5 install ok installed libkeyutils1:amd64 libkeyutils1 1.6-6 install ok installed libkrb5-3:amd64 libkrb5-3 1.17-3+deb10u5 install ok installed libkrb5support0:amd64 libkrb5support0 1.17-3+deb10u5 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.47+dfsg-3+deb10u7 install ok installed libldap-common libldap-common 2.4.47+dfsg-3+deb10u7 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1+deb10u1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+deb10u1 install ok installed libmariadb3:amd64 libmariadb3 1:10.3.39-0+deb10u1 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u3 install ok installed libnettle6:amd64 libnettle6 3.4.1-1+deb10u1 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2+deb10u1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libpng16-16:amd64 libpng16-16 1.6.36-6 install ok installed libpq5:amd64 libpq5 11.20-0+deb10u1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.27+dfsg-1+deb10u2 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.27+dfsg-1+deb10u2 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libssl1.1:amd64 libssl1.1 1.1.1n-0+deb10u5 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u10 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3+deb10u1 install ok installed libtiff5:amd64 libtiff5 4.1.0+git191117-2~deb10u8 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u3 install ok installed libudev1:amd64 libudev1 241-7~deb10u10 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libwebp6:amd64 libwebp6 0.6.1-2+deb10u2 install ok installed libx11-6:amd64 libx11-6 2:1.6.7-1+deb10u3 install ok installed libx11-data libx11-data 2:1.6.7-1+deb10u3 install ok installed libxau6:amd64 libxau6 1:1.0.8-1+b2 install ok installed libxcb1:amd64 libxcb1 1.13.1-2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxpm4:amd64 libxpm4 1:3.5.12-1+deb10u1 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3+deb10u2 install ok installed login login 1:4.5-1.1 install ok installed mariadb-common mariadb-common 1:10.3.39-0+deb10u1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.33.1-0.1 install ok installed mysql-common mysql-common 5.8+1.0.5 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u3 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u3 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed sed sed 4.7-1 install ok installed sensible-utils sensible-utils 0.0.12 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed tzdata tzdata 2021a-0+deb10u11 install ok installed ucf ucf 3.0038+nmu1 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1+deb10u2 0m48.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m48.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', 'remove', 'emboss-data', 'emboss-lib', 'fontconfig-config', 'fonts-dejavu-core', 'libbsd0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgd3:amd64', 'libgssapi-krb5-2:amd64', 'libhpdf-2.3.0:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libmariadb3:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssl1.1:amd64', 'libtiff5:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxpm4:amd64', 'mariadb-common', 'mysql-common', 'sensible-utils', 'ucf', 'emboss'] 0m49.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: emboss emboss-data emboss-lib fontconfig-config fonts-dejavu-core libbsd0 libexpat1 libfontconfig1 libfreetype6 libgd3 libgssapi-krb5-2 libhpdf-2.3.0 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libmariadb3 libpng16-16 libpq5 libsasl2-2 libsasl2-modules-db libssl1.1 libtiff5 libwebp6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxpm4 mariadb-common mysql-common sensible-utils ucf 0 upgraded, 0 newly installed, 38 to remove and 0 not upgraded. After this operation, 519 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9164 files and directories currently installed.) Removing emboss (6.6.0+dfsg-7+b1) ... Removing emboss-data (6.6.0+dfsg-7) ... Removing emboss-lib (6.6.0+dfsg-7+b1) ... Removing libgd3:amd64 (2.2.5-5.2) ... Removing libfontconfig1:amd64 (2.13.1-2) ... Removing fontconfig-config (2.13.1-2) ... Removing fonts-dejavu-core (2.37-1) ... Removing libxpm4:amd64 (1:3.5.12-1+deb10u1) ... Removing libx11-6:amd64 (2:1.6.7-1+deb10u3) ... Removing libxcb1:amd64 (1.13.1-2) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.9.1-2+deb10u1) ... Removing libexpat1:amd64 (2.2.6-2+deb10u6) ... Removing libfreetype6:amd64 (2.9.1-3+deb10u3) ... Removing libpq5:amd64 (11.20-0+deb10u1) ... Removing libgssapi-krb5-2:amd64 (1.17-3+deb10u5) ... Removing libhpdf-2.3.0:amd64 (2.3.0+dfsg-1) ... Removing libtiff5:amd64 (4.1.0+git191117-2~deb10u8) ... Removing libjbig0:amd64 (2.1-3.1+b2) ... Removing libjpeg62-turbo:amd64 (1:1.5.2-2+deb10u1) ... Removing libkrb5-3:amd64 (1.17-3+deb10u5) ... Removing libk5crypto3:amd64 (1.17-3+deb10u5) ... Removing libkrb5support0:amd64 (1.17-3+deb10u5) ... Removing libkeyutils1:amd64 (1.6-6) ... Removing libldap-2.4-2:amd64 (2.4.47+dfsg-3+deb10u7) ... Removing libldap-common (2.4.47+dfsg-3+deb10u7) ... Removing libmariadb3:amd64 (1:10.3.39-0+deb10u1) ... Removing libpng16-16:amd64 (1.6.36-6) ... Removing libsasl2-2:amd64 (2.1.27+dfsg-1+deb10u2) ... Removing libsasl2-modules-db:amd64 (2.1.27+dfsg-1+deb10u2) ... Removing libssl1.1:amd64 (1.1.1n-0+deb10u5) ... Removing libwebp6:amd64 (0.6.1-2+deb10u2) ... Removing libx11-data (2:1.6.7-1+deb10u3) ... Removing libxau6:amd64 (1:1.0.8-1+b2) ... Removing mariadb-common (1:10.3.39-0+deb10u1) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Removing mysql-common (5.8+1.0.5) ... Removing ucf (3.0038+nmu1) ... Removing sensible-utils (0.0.12) ... Processing triggers for libc-bin (2.28-10+deb10u2) ... 0m49.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', 'remove', 'emboss-data', 'emboss-lib', 'fontconfig-config', 'fonts-dejavu-core', 'libbsd0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgd3:amd64', 'libgssapi-krb5-2:amd64', 'libhpdf-2.3.0:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libmariadb3:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssl1.1:amd64', 'libtiff5:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxpm4:amd64', 'mariadb-common', 'mysql-common', 'sensible-utils', 'ucf', 'emboss'] 0m49.6s INFO: Running scripts post_remove 0m49.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_remove_exceptions'] 0m49.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_remove_exceptions'] 0m49.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg', '--purge', 'emboss-data', 'emboss-lib', 'fontconfig-config', 'fonts-dejavu-core', 'libbsd0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgd3:amd64', 'libgssapi-krb5-2:amd64', 'libhpdf-2.3.0:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libmariadb3:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssl1.1:amd64', 'libtiff5:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxpm4:amd64', 'mariadb-common', 'mysql-common', 'sensible-utils', 'ucf'] 0m50.4s DUMP: dpkg: warning: ignoring request to remove emboss-data which isn't installed dpkg: warning: ignoring request to remove emboss-lib which isn't installed (Reading database ... 6498 files and directories currently installed.) Purging configuration files for fontconfig-config (2.13.1-2) ... Purging configuration files for fonts-dejavu-core (2.37-1) ... dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libgd3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.17-3+deb10u5) ... dpkg: warning: ignoring request to remove libhpdf-2.3.0 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove libldap-2.4-2 which isn't installed Purging configuration files for libldap-common (2.4.47+dfsg-3+deb10u7) ... dpkg: warning: ignoring request to remove libmariadb3 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpq5 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed Purging configuration files for libssl1.1:amd64 (1.1.1n-0+deb10u5) ... dpkg: warning: ignoring request to remove libtiff5 which isn't installed dpkg: warning: ignoring request to remove libwebp6 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxpm4 which isn't installed Purging configuration files for mariadb-common (1:10.3.39-0+deb10u1) ... Purging configuration files for mysql-common (5.8+1.0.5) ... dpkg: warning: ignoring request to remove sensible-utils which isn't installed Purging configuration files for ucf (3.0038+nmu1) ... 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg', '--purge', 'emboss-data', 'emboss-lib', 'fontconfig-config', 'fonts-dejavu-core', 'libbsd0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgd3:amd64', 'libgssapi-krb5-2:amd64', 'libhpdf-2.3.0:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libmariadb3:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssl1.1:amd64', 'libtiff5:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxpm4:amd64', 'mariadb-common', 'mysql-common', 'sensible-utils', 'ucf'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg', '--purge', 'emboss'] 0m50.4s DUMP: dpkg: warning: ignoring request to remove emboss which isn't installed 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg', '--purge', 'emboss'] 0m50.4s INFO: Running scripts post_purge 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_purge_exceptions'] 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_purge_exceptions'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg', '--purge', '--pending'] 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg', '--purge', '--pending'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg', '--remove', '--pending'] 0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg', '--remove', '--pending'] 0m50.5s INFO: Running scripts post_test 0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_test_exceptions'] 0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'tmp/scripts/post_test_exceptions'] 0m50.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m50.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m50.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg-divert', '--list'] 0m50.8s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m50.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'dpkg-divert', '--list'] 0m50.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', 'clean'] 0m50.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp71d6ojin', 'apt-get', 'clean'] 0m50.8s DEBUG: Recording chroot state 0m51.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/shm'] 0m51.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/shm'] 0m51.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/console'] 0m51.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/console'] 0m51.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/ptmx'] 0m51.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/ptmx'] 0m51.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/pts'] 0m51.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/dev/pts'] 0m51.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/proc'] 0m51.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp71d6ojin/proc'] 0m51.9s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m52.0s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp71d6ojin'] 0m52.0s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp71d6ojin 0m52.0s INFO: PASS: Upgrading between Debian distributions. 0m52.0s INFO: PASS: All tests. 0m52.0s INFO: piuparts run ends. ret=0 End: 2023-08-03 18:47:27 GMT