Start: 2026-06-08 07:24:03 GMT Package: busco Version: 6.0.0-1 Installed-Size: 1293 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: bbmap, hmmer, prodigal, python3-biopython, python3-pandas, python3:any Description: benchmarking sets of universal single-copy orthologs Homepage: https://gitlab.com/ezlab/busco Description-md5: 40a9b5e0784ce3cc899761f6a14504c5 Section: science Priority: optional Filename: pool/main/b/busco/busco_6.0.0-1_amd64.deb Size: 300372 MD5sum: b1d54f00d27b387b1147475efe5992fb SHA256: cc8fcb66ab268eac7c4721484631221b4599d7c064073488d8ff18000ab4c42f Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d forky --no-upgrade-test --apt busco=6.0.0-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202508211944~1.6.0-10-gffba2cce starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d forky --no-upgrade-test --apt busco=6.0.0-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 6.1.0-49-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.174-1 (2026-05-26) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp7vuc79gm 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp7vuc79gm 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/proc'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/proc'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ forky main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp7vuc79gm/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', 'update'] 0m3.0s DUMP: Get:1 http://deb.debian.org/debian forky InRelease [151 kB] Get:2 http://deb.debian.org/debian forky/main amd64 Packages [9742 kB] Get:3 http://deb.debian.org/debian forky/main Translation-en [6489 kB] Fetched 16.4 MB in 2s (8896 kB/s) Reading package lists... 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', 'update'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', '-yf', 'dist-upgrade'] 0m10.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following NEW packages will be installed: gcc-16-base libc-gconv-modules-extra util-linux-extra The following packages will be upgraded: apt base-files base-passwd bash bsdutils coreutils debconf diffutils dpkg findutils gcc-14-base grep init-system-helpers libacl1 libapt-pkg7.0 libattr1 libaudit-common libaudit1 libblkid1 libbsd0 libbz2-1.0 libc-bin libc6 libcap-ng0 libcap2 libcrypt1 libdb5.3t64 libdebconfclient0 libgcc-s1 libgmp10 libhogweed6t64 liblastlog2-2 liblz4-1 liblzma5 libmd0 libmount1 libnettle8t64 libpam-modules libpam-modules-bin libpam0g libpcre2-8-0 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsmartcols1 libsqlite3-0 libssl3t64 libstdc++6 libsystemd0 libtinfo6 libudev1 libuuid1 libxxhash0 libzstd1 login login.defs mawk mount ncurses-base ncurses-bin openssl-provider-legacy passwd perl-base sed sqv sysvinit-utils tar tzdata util-linux zlib1g 72 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 33.0 MB of archives. After this operation, 2701 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian forky/main amd64 libc-gconv-modules-extra amd64 2.42-16 [1098 kB] Get:2 http://deb.debian.org/debian forky/main amd64 libc6 amd64 2.42-16 [1789 kB] Get:3 http://deb.debian.org/debian forky/main amd64 libc-bin amd64 2.42-16 [622 kB] Get:4 http://deb.debian.org/debian forky/main amd64 gcc-16-base amd64 16.1.0-1 [36.2 kB] Get:5 http://deb.debian.org/debian forky/main amd64 libgcc-s1 amd64 16.1.0-1 [74.0 kB] Get:6 http://deb.debian.org/debian forky/main amd64 base-files amd64 14.2 [88.0 kB] Get:7 http://deb.debian.org/debian forky/main amd64 bash amd64 5.3-3 [1559 kB] Get:8 http://deb.debian.org/debian forky/main amd64 coreutils amd64 9.10-1 [3142 kB] Get:9 http://deb.debian.org/debian forky/main amd64 diffutils amd64 1:3.12-1 [405 kB] Get:10 http://deb.debian.org/debian forky/main amd64 libbz2-1.0 amd64 1.0.8-6+b2 [39.9 kB] Get:11 http://deb.debian.org/debian forky/main amd64 libxxhash0 amd64 0.8.3-2+b2 [27.1 kB] Get:12 http://deb.debian.org/debian forky/main amd64 liblz4-1 amd64 1.10.0-10 [70.3 kB] Get:13 http://deb.debian.org/debian forky/main amd64 liblzma5 amd64 5.8.3-1 [332 kB] Get:14 http://deb.debian.org/debian forky/main amd64 libssl3t64 amd64 3.6.2-1 [2482 kB] Get:15 http://deb.debian.org/debian forky/main amd64 openssl-provider-legacy amd64 3.6.2-1 [316 kB] Get:16 http://deb.debian.org/debian forky/main amd64 libzstd1 amd64 1.5.7+dfsg-3+b2 [305 kB] Get:17 http://deb.debian.org/debian forky/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.2-3 [90.9 kB] Get:18 http://deb.debian.org/debian forky/main amd64 libstdc++6 amd64 16.1.0-1 [823 kB] Get:19 http://deb.debian.org/debian forky/main amd64 libsystemd0 amd64 260.1-1 [446 kB] Get:20 http://deb.debian.org/debian forky/main amd64 libudev1 amd64 260.1-1 [133 kB] Get:21 http://deb.debian.org/debian forky/main amd64 libapt-pkg7.0 amd64 3.3.1 [1223 kB] Get:22 http://deb.debian.org/debian forky/main amd64 tar amd64 1.35+dfsg-4 [817 kB] Get:23 http://deb.debian.org/debian forky/main amd64 dpkg amd64 1.23.7 [1531 kB] Get:24 http://deb.debian.org/debian forky/main amd64 findutils amd64 4.10.0-4 [700 kB] Get:25 http://deb.debian.org/debian forky/main amd64 grep amd64 3.12-1 [443 kB] Get:26 http://deb.debian.org/debian forky/main amd64 libtinfo6 amd64 6.6+20251231-1+b1 [350 kB] Get:27 http://deb.debian.org/debian forky/main amd64 ncurses-bin amd64 6.6+20251231-1+b1 [442 kB] Get:28 http://deb.debian.org/debian forky/main amd64 perl-base amd64 5.40.1-7+b1 [1676 kB] Get:29 http://deb.debian.org/debian forky/main amd64 sed amd64 4.9-3 [331 kB] Get:30 http://deb.debian.org/debian forky/main amd64 libuuid1 amd64 2.42.1-2 [33.3 kB] Get:31 http://deb.debian.org/debian forky/main amd64 bsdutils amd64 1:2.42.1-2 [90.7 kB] Get:32 http://deb.debian.org/debian forky/main amd64 libblkid1 amd64 2.42.1-2 [172 kB] Get:33 http://deb.debian.org/debian forky/main amd64 libmount1 amd64 2.42.1-2 [213 kB] Get:34 http://deb.debian.org/debian forky/main amd64 libsmartcols1 amd64 2.42.1-2 [144 kB] Get:35 http://deb.debian.org/debian forky/main amd64 util-linux amd64 2.42.1-2 [1225 kB] Get:36 http://deb.debian.org/debian forky/main amd64 mount amd64 2.42.1-2 [164 kB] Get:37 http://deb.debian.org/debian forky/main amd64 libpcre2-8-0 amd64 10.46-1+b2 [297 kB] Get:38 http://deb.debian.org/debian forky/main amd64 libselinux1 amd64 3.10-1 [85.4 kB] Get:39 http://deb.debian.org/debian forky/main amd64 libdebconfclient0 amd64 0.283 [7572 B] Get:40 http://deb.debian.org/debian forky/main amd64 base-passwd amd64 3.6.8 [54.6 kB] Get:41 http://deb.debian.org/debian forky/main amd64 libgmp10 amd64 2:6.3.0+dfsg-5+b2 [560 kB] Get:42 http://deb.debian.org/debian forky/main amd64 libnettle8t64 amd64 3.10.2-1+b1 [305 kB] Get:43 http://deb.debian.org/debian forky/main amd64 libhogweed6t64 amd64 3.10.2-1+b1 [335 kB] Get:44 http://deb.debian.org/debian forky/main amd64 sqv amd64 1.3.0-5+b2 [624 kB] Get:45 http://deb.debian.org/debian forky/main amd64 libseccomp2 amd64 2.6.0-2+b1 [52.2 kB] Get:46 http://deb.debian.org/debian forky/main amd64 apt amd64 3.3.1 [1519 kB] Get:47 http://deb.debian.org/debian forky/main amd64 init-system-helpers all 1.69 [39.3 kB] Get:48 http://deb.debian.org/debian forky/main amd64 ncurses-base all 6.6+20251231-1 [277 kB] Get:49 http://deb.debian.org/debian forky/main amd64 sysvinit-utils amd64 3.18-1 [29.7 kB] Get:50 http://deb.debian.org/debian forky/main amd64 libaudit-common all 1:4.1.2-1 [14.3 kB] Get:51 http://deb.debian.org/debian forky/main amd64 libcap-ng0 amd64 0.9.3-1 [17.9 kB] Get:52 http://deb.debian.org/debian forky/main amd64 libaudit1 amd64 1:4.1.2-1+b1 [60.2 kB] Get:53 http://deb.debian.org/debian forky/main amd64 libcrypt1 amd64 1:4.5.1-1+b1 [96.4 kB] Get:54 http://deb.debian.org/debian forky/main amd64 debconf all 1.5.92 [123 kB] Get:55 http://deb.debian.org/debian forky/main amd64 libpam0g amd64 1.7.0-5+b2 [66.3 kB] Get:56 http://deb.debian.org/debian forky/main amd64 libpam-modules-bin amd64 1.7.0-5+b2 [45.6 kB] Get:57 http://deb.debian.org/debian forky/main amd64 libpam-modules amd64 1.7.0-5+b2 [175 kB] Get:58 http://deb.debian.org/debian forky/main amd64 login amd64 1:4.16.0-2+really2.42.1-2 [118 kB] Get:59 http://deb.debian.org/debian forky/main amd64 libacl1 amd64 2.3.2-3 [32.7 kB] Get:60 http://deb.debian.org/debian forky/main amd64 libattr1 amd64 1:2.5.2-4 [23.0 kB] Get:61 http://deb.debian.org/debian forky/main amd64 libcap2 amd64 1:2.78-1 [26.9 kB] Get:62 http://deb.debian.org/debian forky/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-11+b1 [709 kB] Get:63 http://deb.debian.org/debian forky/main amd64 libsqlite3-0 amd64 3.46.1-9+b1 [918 kB] Get:64 http://deb.debian.org/debian forky/main amd64 liblastlog2-2 amd64 2.42.1-2 [24.2 kB] Get:65 http://deb.debian.org/debian forky/main amd64 libmd0 amd64 1.2.0-2 [43.2 kB] Get:66 http://deb.debian.org/debian forky/main amd64 login.defs all 1:4.19.3-2 [208 kB] Get:67 http://deb.debian.org/debian forky/main amd64 mawk amd64 1.3.4.20260302-1 [142 kB] Get:68 http://deb.debian.org/debian forky/main amd64 libbsd0 amd64 0.12.2-3 [132 kB] Get:69 http://deb.debian.org/debian forky/main amd64 libsemanage-common all 3.10-1 [6776 B] Get:70 http://deb.debian.org/debian forky/main amd64 libsepol2 amd64 3.10-1 [307 kB] Get:71 http://deb.debian.org/debian forky/main amd64 libsemanage2 amd64 3.10-1 [92.4 kB] Get:72 http://deb.debian.org/debian forky/main amd64 passwd amd64 1:4.19.3-2 [1284 kB] Get:73 http://deb.debian.org/debian forky/main amd64 tzdata all 2026b-1 [260 kB] Get:74 http://deb.debian.org/debian forky/main amd64 util-linux-extra amd64 2.42.1-2 [442 kB] Get:75 http://deb.debian.org/debian forky/main amd64 gcc-14-base amd64 14.3.0-14 [34.0 kB] Preconfiguring packages ... Fetched 33.0 MB in 0s (116 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4934 files and directories currently installed.) Preparing to unpack .../libc6_2.42-16_amd64.deb ... Unpacking libc6:amd64 (2.42-16) over (2.41-12) ... Selecting previously unselected package libc-gconv-modules-extra:amd64. Preparing to unpack .../libc-gconv-modules-extra_2.42-16_amd64.deb ... Unpacking libc-gconv-modules-extra:amd64 (2.42-16) ... Setting up libc-gconv-modules-extra:amd64 (2.42-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4939 files and directories currently installed.) Preparing to unpack .../libc-bin_2.42-16_amd64.deb ... Unpacking libc-bin (2.42-16) over (2.41-12) ... Setting up libc6:amd64 (2.42-16) ... Installing new version of config file /etc/ld.so.conf.d/x86_64-linux-gnu.conf ... Setting up libc-bin (2.42-16) ... Selecting previously unselected package gcc-16-base:amd64. 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4938 files and directories currently installed.) Preparing to unpack .../libnettle8t64_3.10.2-1+b1_amd64.deb ... Unpacking libnettle8t64:amd64 (3.10.2-1+b1) over (3.10.1-1) ... Setting up libnettle8t64:amd64 (3.10.2-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4939 files and directories currently installed.) Preparing to unpack .../libhogweed6t64_3.10.2-1+b1_amd64.deb ... Unpacking libhogweed6t64:amd64 (3.10.2-1+b1) over (3.10.1-1) ... Setting up libhogweed6t64:amd64 (3.10.2-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4940 files and directories currently installed.) Preparing to unpack .../sqv_1.3.0-5+b2_amd64.deb ... Unpacking sqv (1.3.0-5+b2) over (1.3.0-3) ... Setting up sqv (1.3.0-5+b2) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.6+20251231-1_all.deb ... Unpacking ncurses-base (6.6+20251231-1) over (6.5+20250216-2) ... Setting up ncurses-base (6.6+20251231-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.18-1_amd64.deb ... Unpacking sysvinit-utils (3.18-1) over (3.14-4) ... Setting up sysvinit-utils (3.18-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a4.1.2-1_all.deb ... Unpacking libaudit-common (1:4.1.2-1) over (1:4.0.2-2) ... Setting up libaudit-common (1:4.1.2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.9.3-1_amd64.deb ... Unpacking libcap-ng0:amd64 (0.9.3-1) over (0.8.5-4+b1) ... Setting up libcap-ng0:amd64 (0.9.3-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4944 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a4.1.2-1+b1_amd64.deb ... Unpacking libaudit1:amd64 (1:4.1.2-1+b1) over (1:4.0.2-2+b2) ... Setting up libaudit1:amd64 (1:4.1.2-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4944 files and directories currently installed.) Preparing to unpack .../libcrypt1_1%3a4.5.1-1+b1_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.5.1-1+b1) over (1:4.4.38-1) ... Setting up libcrypt1:amd64 (1:4.5.1-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../debconf_1.5.92_all.deb ... Unpacking debconf (1.5.92) over (1.5.91) ... Setting up debconf (1.5.92) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4947 files and directories currently installed.) Preparing to unpack .../libpam0g_1.7.0-5+b2_amd64.deb ... Unpacking libpam0g:amd64 (1.7.0-5+b2) over (1.7.0-5) ... Setting up libpam0g:amd64 (1.7.0-5+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4948 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.7.0-5+b2_amd64.deb ... Unpacking libpam-modules-bin (1.7.0-5+b2) over (1.7.0-5) ... Setting up libpam-modules-bin (1.7.0-5+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4949 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.7.0-5+b2_amd64.deb ... Unpacking libpam-modules:amd64 (1.7.0-5+b2) over (1.7.0-5) ... Setting up libpam-modules:amd64 (1.7.0-5+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4950 files and directories currently installed.) Preparing to unpack .../login_1%3a4.16.0-2+really2.42.1-2_amd64.deb ... Unpacking login (1:4.16.0-2+really2.42.1-2) over (1:4.16.0-2+really2.41-5) ... Preparing to unpack .../libacl1_2.3.2-3_amd64.deb ... Unpacking libacl1:amd64 (2.3.2-3) over (2.3.2-2+b1) ... Setting up libacl1:amd64 (2.3.2-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4948 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.5.2-4_amd64.deb ... Unpacking libattr1:amd64 (1:2.5.2-4) over (1:2.5.2-3) ... Setting up libattr1:amd64 (1:2.5.2-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4948 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.78-1_amd64.deb ... Unpacking libcap2:amd64 (1:2.78-1) over (1:2.75-10+b1) ... Setting up libcap2:amd64 (1:2.78-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4947 files and directories currently installed.) Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-11+b1_amd64.deb ... Unpacking libdb5.3t64:amd64 (5.3.28+dfsg2-11+b1) over (5.3.28+dfsg2-9) ... Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-11+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4948 files and directories currently installed.) Preparing to unpack .../libsqlite3-0_3.46.1-9+b1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.1-9+b1) over (3.46.1-7) ... Setting up libsqlite3-0:amd64 (3.46.1-9+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4949 files and directories currently installed.) Preparing to unpack .../liblastlog2-2_2.42.1-2_amd64.deb ... Unpacking liblastlog2-2:amd64 (2.42.1-2) over (2.41-5) ... Setting up liblastlog2-2:amd64 (2.42.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4949 files and directories currently installed.) Preparing to unpack .../libmd0_1.2.0-2_amd64.deb ... Unpacking libmd0:amd64 (1.2.0-2) over (1.1.0-2+b1) ... Setting up libmd0:amd64 (1.2.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4948 files and directories currently installed.) Preparing to unpack .../0-login.defs_1%3a4.19.3-2_all.deb ... Unpacking login.defs (1:4.19.3-2) over (1:4.17.4-2) ... Preparing to unpack .../1-mawk_1.3.4.20260302-1_amd64.deb ... Unpacking mawk (1.3.4.20260302-1) over (1.3.4.20250131-1) ... Preparing to unpack .../2-libbsd0_0.12.2-3_amd64.deb ... Unpacking libbsd0:amd64 (0.12.2-3) over (0.12.2-2) ... Preparing to unpack .../3-libsemanage-common_3.10-1_all.deb ... Unpacking libsemanage-common (3.10-1) over (3.8.1-1) ... Preparing to unpack .../4-libsepol2_3.10-1_amd64.deb ... Unpacking libsepol2:amd64 (3.10-1) over (3.8.1-1) ... Preparing to unpack .../5-libsemanage2_3.10-1_amd64.deb ... Unpacking libsemanage2:amd64 (3.10-1) over (3.8.1-1) ... Preparing to unpack .../6-passwd_1%3a4.19.3-2_amd64.deb ... Unpacking passwd (1:4.19.3-2) over (1:4.17.4-2) ... Preparing to unpack .../7-tzdata_2026b-1_all.deb ... Unpacking tzdata (2026b-1) over (2025b-4) ... Selecting previously unselected package util-linux-extra. Preparing to unpack .../8-util-linux-extra_2.42.1-2_amd64.deb ... Unpacking util-linux-extra (2.42.1-2) ... Preparing to unpack .../9-gcc-14-base_14.3.0-14_amd64.deb ... Unpacking gcc-14-base:amd64 (14.3.0-14) over (14.2.0-19) ... Setting up gcc-14-base:amd64 (14.3.0-14) ... Setting up login.defs (1:4.19.3-2) ... Installing new version of config file /etc/login.defs ... Setting up libsemanage-common (3.10-1) ... Setting up tzdata (2026b-1) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Jun 8 07:24:14 UTC 2026. Universal Time is now: Mon Jun 8 07:24:14 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libsepol2:amd64 (3.10-1) ... Setting up mount (2.42.1-2) ... Setting up libsemanage2:amd64 (3.10-1) ... Setting up mawk (1.3.4.20260302-1) ... Setting up libbsd0:amd64 (0.12.2-3) ... Setting up util-linux-extra (2.42.1-2) ... Setting up login (1:4.16.0-2+really2.42.1-2) ... Setting up passwd (1:4.19.3-2) ... Processing triggers for libc-bin (2.42-16) ... Processing triggers for debianutils (5.23.2) ... 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', '-yf', 'dist-upgrade'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m12.3s DUMP: e02792a17f0df2718d47dabb85e2d767 - 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m12.3s INFO: Running scripts post_setup 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_dummy_users'] 0m12.9s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_dummy_users'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_forbid_home'] 0m12.9s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_forbid_home'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_force-unsafe-io'] 0m12.9s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_force-unsafe-io'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_minimize'] 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_minimize'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_squeeze-backports'] 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_squeeze-backports'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_zz_backports'] 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_setup_zz_backports'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', 'clean'] 0m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', 'clean'] 0m13.0s DEBUG: Recording chroot state 0m13.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m13.4s DUMP: install ok installed apt apt 3.3.1 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-3 install ok installed bsdutils bsdutils 1:2.42.1-2 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.23.2 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.7 install ok installed findutils findutils 4.10.0-4 install ok installed gcc-14-base:amd64 gcc-14-base 14.3.0-14 install ok installed gcc-16-base:amd64 gcc-16-base 16.1.0-1 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.13-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69 install ok installed libacl1:amd64 libacl1 2.3.2-3 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.1 install ok installed libattr1:amd64 libattr1 1:2.5.2-4 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b1 install ok installed libblkid1:amd64 libblkid1 2.42.1-2 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.42-16 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.42-16 install ok installed libc6:amd64 libc6 2.42-16 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.3-1 install ok installed libcap2:amd64 libcap2 1:2.78-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.1-1+b1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libgcc-s1:amd64 libgcc-s1 16.1.0-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed liblastlog2-2:amd64 liblastlog2-2 2.42.1-2 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.3-1 install ok installed libmd0:amd64 libmd0 1.2.0-2 install ok installed libmount1:amd64 libmount1 2.42.1-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-5+b2 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-5+b2 install ok installed libpam-runtime libpam-runtime 1.7.0-5 install ok installed libpam0g:amd64 libpam0g 1.7.0-5+b2 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.46-1+b2 install ok installed libseccomp2:amd64 libseccomp2 2.6.0-2+b1 install ok installed libselinux1:amd64 libselinux1 3.10-1 install ok installed libsemanage-common libsemanage-common 3.10-1 install ok installed libsemanage2:amd64 libsemanage2 3.10-1 install ok installed libsepol2:amd64 libsepol2 3.10-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.1-2 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-9+b1 install ok installed libssl3t64:amd64 libssl3t64 3.6.2-1 install ok installed libstdc++6:amd64 libstdc++6 16.1.0-1 install ok installed libsystemd0:amd64 libsystemd0 260.1-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20251231-1+b1 install ok installed libudev1:amd64 libudev1 260.1-1 install ok installed libuuid1:amd64 libuuid1 2.42.1-2 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-3+b2 install ok installed login login 1:4.16.0-2+really2.42.1-2 install ok installed login.defs login.defs 1:4.19.3-2 install ok installed mawk mawk 1.3.4.20260302-1 install ok installed mount mount 2.42.1-2 install ok installed ncurses-base ncurses-base 6.6+20251231-1 install ok installed ncurses-bin ncurses-bin 6.6+20251231-1+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.2-1 install ok installed passwd passwd 1:4.19.3-2 install ok installed perl-base perl-base 5.40.1-7+b1 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.3.0-5+b2 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-4 install ok installed tzdata tzdata 2026b-1 install ok installed util-linux util-linux 2.42.1-2 install ok installed util-linux-extra util-linux-extra 2.42.1-2 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 0m13.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m13.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg-divert', '--list'] 0m13.4s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m13.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg-divert', '--list'] 0m13.4s INFO: Running scripts is_testable 0m13.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/is_testable_uninstallable'] 0m13.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/is_testable_uninstallable'] 0m13.4s INFO: apt-cache does not know about any of the requested packages 0m13.4s INFO: Running scripts pre_test 0m13.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_test_exceptions'] 0m13.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_test_exceptions'] 0m13.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_test_root_password'] 0m13.5s DUMP: New password: Retype new password: passwd: password updated successfully 0m13.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_test_root_password'] 0m13.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 0m13.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 0m14.1s DEBUG: No broken symlinks as far as we can find. 0m14.1s INFO: Running scripts pre_install 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_database-server'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_database-server'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_exceptions'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_exceptions'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_extras'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_extras'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_foreign_architecture'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_foreign_architecture'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m14.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 0m14.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 0m14.7s DEBUG: No broken symlinks as far as we can find. 0m14.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-cache', 'policy'] 0m15.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian forky/main amd64 Packages release o=Debian,a=testing,n=forky,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-cache', 'policy'] 0m15.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-cache', 'policy', 'busco'] 0m15.4s DUMP: busco: Installed: (none) Candidate: 6.0.0-1 Version table: 6.0.0-1 500 500 http://deb.debian.org/debian forky/main amd64 Packages 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-cache', 'policy', 'busco'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', '-y', 'install', 'busco=6.0.0-1'] 2m7.2s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: alsa-topology-conf alsa-ucm-conf bbmap binutils binutils-common binutils-x86-64-linux-gnu build-essential bzip2 ca-certificates ca-certificates-java cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu default-jre-headless dpkg-dev fakeroot fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-font-awesome fonts-lato fonts-lyx fonts-urw-base35 g++ g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15 gcc-15-base gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu hmmer isa-support isympy-common isympy3 java-common javascript-common krb5-locales libabsl20260107 libada-url0-3 libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libaom3 libapache-pom-java libasan8 libasound2-data libasound2t64 libatomic1 libavahi-client3 libavahi-common-data libavahi-common3 libavif16 libbinutils libblas3 libblosc1 libblosc2-7 libbrotli1 libc-dev-bin libc6-dev libcairo2 libcares2 libcc1-0 libcom-err2 libcommons-cli-java libcommons-codec-java libcommons-io-java libcommons-parent-java libctf-nobfd0 libctf0 libcups2t64 libcurl4t64 libdav1d7 libdbus-1-3 libdeflate0 libdisplay-info3 libdivsufsort3 libdpkg-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm2 libedit2 libelf1t64 libexpat1 libexpat1-dev libfakeroot libffi8 libfile-fcntllock-perl libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgav1-2 libgbm1 libgcc-15-dev libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgfortran5 libgl1 libgl1-mesa-dri libglib2.0-0t64 libglib2.0-data libglvnd0 libglx-mesa0 libglx0 libgnutls30t64 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz-subset0 libharfbuzz0b libhdf5-310 libhwasan0 libhwloc-plugins libhwloc15 libicu78 libidn2-0 libimagequant0 libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-common libldap2 liblerc4 libllhttp9.4 libllvm21 liblmdb0 liblocale-gettext-perl liblog4j1.2-java liblsan0 liblzo2-2 libmbedcrypto16 libmbedtls21 libmbedx509-7 libmpc3 libmpfr6 libmpj-java libncbi-vdb3 libncursesw6 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libnode137 libnspr4 libnss3 libopenjp2-7 libp11-kit0 libpciaccess0 libpcsclite1 libperl5.40 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3-dev libpython3-stdlib libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libquadmath0 libraqm0 librav1e0.8 libreadline8t64 libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libsframe3 libsharpyuv0 libsimdjson33 libsimdutf33 libskia146 libsnappy1v5 libssh2-1t64 libstdc++-15-dev libsvtav1enc4 libsz2 libtasn1-6 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtiff6 libtk8.6 libtsan2 libubsan1 libunistring5 libuv1t64 libvulkan1 libwayland-client0 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2-16 libxnvctrl0 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxxf86vm1 libyaml-0-2 libyuv0 libz3-4 libze1 libzopfli1 linux-libc-dev make manpages manpages-dev media-types mesa-libgallium mesa-vulkan-drivers ncbi-blast+ ncbi-data ncbi-vdb-data netbase node-acorn node-balanced-match node-brace-expansion node-commander node-corepack node-debug node-llhttp node-lru-cache node-mathjax-full node-minimatch node-mj-context-menu node-ms node-semver node-speech-rule-engine node-undici node-xmldom node-xtend nodejs nodejs-doc numba-doc ocl-icd-libopencl1 openjdk-25-jre-headless openssl patch perl perl-modules-5.40 pigz prodigal publicsuffix python-babel-localedata python-biopython-doc python-matplotlib-data python-odf-doc python-odf-tools python-tables-data python3 python3-attr python3-babel python3-biopython python3-bottleneck python3-brotli python3-bs4 python3-cairo python3-certifi python3-chardet python3-charset-normalizer python3-contourpy python3-cpuinfo python3-cssselect python3-cycler python3-dateutil python3-decorator python3-defusedxml python3-dev python3-et-xmlfile python3-fonttools python3-freetype python3-html5lib python3-idna python3-jinja2 python3-kiwisolver python3-legacy-cgi python3-llvmlite python3-lxml python3-lz4 python3-markupsafe python3-matplotlib python3-minimal python3-mpmath python3-numba python3-numexpr python3-numpy python3-numpy-dev python3-odf python3-olefile python3-openpyxl python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pip python3-platformdirs python3-pooch python3-pyparsing python3-pytz python3-reportlab python3-requests python3-rlpycairo python3-scipy python3-skia-pathops python3-soupsieve python3-sympy python3-tables python3-tables-lib python3-tk python3-tqdm python3-typing-extensions python3-ufolib2 python3-uharfbuzz python3-unicodedata2 python3-urllib3 python3-webencodings python3-wheel python3-yaml python3-zopfli python3.13 python3.13-dev python3.13-minimal python3.13-tk python3.14-tk readline-common rpcsvc-proto sgml-base shared-mime-info sphinx-rtd-theme-common sq sse4.2-support unicode-data w3c-sgml-lib x11-common xdg-user-dirs xfonts-encodings xfonts-utils xml-core xz-utils zlib1g-dev Suggested packages: binutils-doc gprofng-gui binutils-gold bzip2-doc cpp-doc gcc-15-locales cpp-15-doc default-jre debian-keyring debian-tag2upload-keyring fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre g++-multilib g++-15-multilib gcc-15-doc gcc-multilib autoconf automake libtool flex bison gdb gcc-doc gcc-15-multilib gdb-x86-64-linux-gnu hmmer-doc apache2 | lighttpd | httpd alsa-utils libasound2-plugins libc-devtools glibc-doc cups-common sensible-utils git bzr rng-tools gdbm-l10n low-memory-monitor gnutls-bin gpm krb5-doc krb5-user libhwloc-contrib-plugins liblcms2-utils liblog4j1.2-java-doc libmail-java pciutils pcscd libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal libsasl2-modules-ldap libsasl2-modules-otp libsasl2-modules-sql lm-sensors libstdc++-15-doc tcl8.6 tk8.6 make-doc man-browser libjs-mathjax-doc npm opencl-icd libnss-mdns fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic ed diffutils-doc perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl python3-doc python3-venv python-attr-doc bwa clustalo clustalw dialign dssp emboss fasttree mafft muscle3 phylip phyml prank probcons python3-mysqldb python3-mmtf python3-rdflib python3-psycopg2 python3-igraph raxml samtools t-coffee wise python-bottleneck-doc python-charset-normalizer-doc python-cycler-doc python3-genshi python-jinja2-doc llvmlite-doc python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 gir1.2-gtk-4.0 inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt6 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 nvidia-cuda-toolkit gfortran python-numpy-doc python3-pytest python-openpyxl-doc python-pandas-doc python3-statsmodels python-pil-doc python3-paramiko python-pyparsing-doc pdf-viewer python3-egenix-mxtexttools python-reportlab-doc rl-accel rl-renderpm python3-cryptography python3-openssl python3-socks python-requests-doc python-scipy-doc texlive-fonts-extra python-sympy-doc python3-netcdf4 python-tables-doc vitables blt tix python3-backports.zstd | python3-supported-min python3-setuptools python3.13-venv python3.13-doc binfmt-support readline-doc sgml-base-doc debhelper The following NEW packages will be installed: alsa-topology-conf alsa-ucm-conf bbmap binutils binutils-common binutils-x86-64-linux-gnu build-essential busco bzip2 ca-certificates ca-certificates-java cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu default-jre-headless dpkg-dev fakeroot fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-font-awesome fonts-lato fonts-lyx fonts-urw-base35 g++ g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15 gcc-15-base gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu hmmer isa-support isympy-common isympy3 java-common javascript-common krb5-locales libabsl20260107 libada-url0-3 libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libaom3 libapache-pom-java libasan8 libasound2-data libasound2t64 libatomic1 libavahi-client3 libavahi-common-data libavahi-common3 libavif16 libbinutils libblas3 libblosc1 libblosc2-7 libbrotli1 libc-dev-bin libc6-dev libcairo2 libcares2 libcc1-0 libcom-err2 libcommons-cli-java libcommons-codec-java libcommons-io-java libcommons-parent-java libctf-nobfd0 libctf0 libcups2t64 libcurl4t64 libdav1d7 libdbus-1-3 libdeflate0 libdisplay-info3 libdivsufsort3 libdpkg-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm2 libedit2 libelf1t64 libexpat1 libexpat1-dev libfakeroot libffi8 libfile-fcntllock-perl libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgav1-2 libgbm1 libgcc-15-dev libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgfortran5 libgl1 libgl1-mesa-dri libglib2.0-0t64 libglib2.0-data libglvnd0 libglx-mesa0 libglx0 libgnutls30t64 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz-subset0 libharfbuzz0b libhdf5-310 libhwasan0 libhwloc-plugins libhwloc15 libicu78 libidn2-0 libimagequant0 libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-common libldap2 liblerc4 libllhttp9.4 libllvm21 liblmdb0 liblocale-gettext-perl liblog4j1.2-java liblsan0 liblzo2-2 libmbedcrypto16 libmbedtls21 libmbedx509-7 libmpc3 libmpfr6 libmpj-java libncbi-vdb3 libncursesw6 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libnode137 libnspr4 libnss3 libopenjp2-7 libp11-kit0 libpciaccess0 libpcsclite1 libperl5.40 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3-dev libpython3-stdlib libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libquadmath0 libraqm0 librav1e0.8 libreadline8t64 libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libsframe3 libsharpyuv0 libsimdjson33 libsimdutf33 libskia146 libsnappy1v5 libssh2-1t64 libstdc++-15-dev libsvtav1enc4 libsz2 libtasn1-6 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtiff6 libtk8.6 libtsan2 libubsan1 libunistring5 libuv1t64 libvulkan1 libwayland-client0 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2-16 libxnvctrl0 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxxf86vm1 libyaml-0-2 libyuv0 libz3-4 libze1 libzopfli1 linux-libc-dev make manpages manpages-dev media-types mesa-libgallium mesa-vulkan-drivers ncbi-blast+ ncbi-data ncbi-vdb-data netbase node-acorn node-balanced-match node-brace-expansion node-commander node-corepack node-debug node-llhttp node-lru-cache node-mathjax-full node-minimatch node-mj-context-menu node-ms node-semver node-speech-rule-engine node-undici node-xmldom node-xtend nodejs nodejs-doc numba-doc ocl-icd-libopencl1 openjdk-25-jre-headless openssl patch perl perl-modules-5.40 pigz prodigal publicsuffix python-babel-localedata python-biopython-doc python-matplotlib-data python-odf-doc python-odf-tools python-tables-data python3 python3-attr python3-babel python3-biopython python3-bottleneck python3-brotli python3-bs4 python3-cairo python3-certifi python3-chardet python3-charset-normalizer python3-contourpy python3-cpuinfo python3-cssselect python3-cycler python3-dateutil python3-decorator python3-defusedxml python3-dev python3-et-xmlfile python3-fonttools python3-freetype python3-html5lib python3-idna python3-jinja2 python3-kiwisolver python3-legacy-cgi python3-llvmlite python3-lxml python3-lz4 python3-markupsafe python3-matplotlib python3-minimal python3-mpmath python3-numba python3-numexpr python3-numpy python3-numpy-dev python3-odf python3-olefile python3-openpyxl python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pip python3-platformdirs python3-pooch python3-pyparsing python3-pytz python3-reportlab python3-requests python3-rlpycairo python3-scipy python3-skia-pathops python3-soupsieve python3-sympy python3-tables python3-tables-lib python3-tk python3-tqdm python3-typing-extensions python3-ufolib2 python3-uharfbuzz python3-unicodedata2 python3-urllib3 python3-webencodings python3-wheel python3-yaml python3-zopfli python3.13 python3.13-dev python3.13-minimal python3.13-tk python3.14-tk readline-common rpcsvc-proto sgml-base shared-mime-info sphinx-rtd-theme-common sq sse4.2-support unicode-data w3c-sgml-lib x11-common xdg-user-dirs xfonts-encodings xfonts-utils xml-core xz-utils zlib1g-dev 0 upgraded, 382 newly installed, 0 to remove and 0 not upgraded. Need to get 515 MB of archives. After this operation, 2221 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian forky/main amd64 fonts-lato all 2.015-1 [2780 kB] Get:2 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.8.1-1 [117 kB] Get:3 http://deb.debian.org/debian forky/main amd64 liblocale-gettext-perl amd64 1.07-10 [14.9 kB] Get:4 http://deb.debian.org/debian forky/main amd64 libzopfli1 amd64 1.0.3-3 [106 kB] Get:5 http://deb.debian.org/debian forky/main amd64 pigz amd64 2.8-2 [44.2 kB] Get:6 http://deb.debian.org/debian forky/main amd64 libpython3.13-minimal amd64 3.13.12-1 [866 kB] Get:7 http://deb.debian.org/debian forky/main amd64 python3.13-minimal amd64 3.13.12-1 [2267 kB] Get:8 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.13.9-3+b1 [25.4 kB] Get:9 http://deb.debian.org/debian forky/main amd64 media-types all 14.0.0 [30.8 kB] Get:10 http://deb.debian.org/debian forky/main amd64 netbase all 6.5 [12.4 kB] Get:11 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.5.2-4 [25.2 kB] Get:12 http://deb.debian.org/debian forky/main amd64 libncursesw6 amd64 6.6+20251231-1+b1 [136 kB] Get:13 http://deb.debian.org/debian forky/main amd64 readline-common all 8.3-4 [74.8 kB] Get:14 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.3-4 [181 kB] Get:15 http://deb.debian.org/debian forky/main amd64 libpython3.13-stdlib amd64 3.13.12-1 [1974 kB] Get:16 http://deb.debian.org/debian forky/main amd64 python3.13 amd64 3.13.12-1 [776 kB] Get:17 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.13.9-3+b1 [8348 B] Get:18 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.13.9-3+b1 [25.4 kB] Get:19 http://deb.debian.org/debian forky/main amd64 python3-numpy-dev amd64 1:2.3.5+ds-3+b1 [136 kB] Get:20 http://deb.debian.org/debian forky/main amd64 libblas3 amd64 3.12.1-7+b2 [206 kB] Get:21 http://deb.debian.org/debian forky/main amd64 libgfortran5 amd64 16.1.0-1 [878 kB] Get:22 http://deb.debian.org/debian forky/main amd64 liblapack3 amd64 3.12.1-7+b2 [2546 kB] Get:23 http://deb.debian.org/debian forky/main amd64 python3-numpy amd64 1:2.3.5+ds-3+b1 [7486 kB] Get:24 http://deb.debian.org/debian forky/main amd64 isa-support amd64 27+b1 [15.5 kB] Get:25 http://deb.debian.org/debian forky/main amd64 sse4.2-support amd64 27+b1 [3692 B] Get:26 http://deb.debian.org/debian forky/main amd64 bzip2 amd64 1.0.8-6+b2 [40.4 kB] Get:27 http://deb.debian.org/debian forky/main amd64 openssl amd64 3.6.2-1 [1517 kB] Get:28 http://deb.debian.org/debian forky/main amd64 ca-certificates all 20260223 [158 kB] Get:29 http://deb.debian.org/debian forky/main amd64 krb5-locales all 1.22.1-2.1 [98.7 kB] Get:30 http://deb.debian.org/debian forky/main amd64 manpages all 6.18-1 [1384 kB] Get:31 http://deb.debian.org/debian forky/main amd64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Get:32 http://deb.debian.org/debian forky/main amd64 libgdbm6t64 amd64 1.26-1+b2 [77.7 kB] Get:33 http://deb.debian.org/debian forky/main amd64 libgdbm-compat4t64 amd64 1.26-1+b2 [52.0 kB] Get:34 http://deb.debian.org/debian forky/main amd64 libperl5.40 amd64 5.40.1-7+b1 [4319 kB] Get:35 http://deb.debian.org/debian forky/main amd64 perl amd64 5.40.1-7+b1 [264 kB] Get:36 http://deb.debian.org/debian forky/main amd64 xz-utils amd64 5.8.3-1 [740 kB] Get:37 http://deb.debian.org/debian forky/main amd64 alsa-topology-conf all 1.2.5.1-3 [15.3 kB] Get:38 http://deb.debian.org/debian forky/main amd64 libasound2-data all 1.2.15.3-1 [21.2 kB] Get:39 http://deb.debian.org/debian forky/main amd64 libasound2t64 amd64 1.2.15.3-1+b1 [394 kB] Get:40 http://deb.debian.org/debian forky/main amd64 alsa-ucm-conf all 1.2.15.3-1 [101 kB] Get:41 http://deb.debian.org/debian forky/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB] Get:42 http://deb.debian.org/debian forky/main amd64 libapache-pom-java all 33-2 [5852 B] Get:43 http://deb.debian.org/debian forky/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:44 http://deb.debian.org/debian forky/main amd64 libcommons-codec-java all 1.22.0-1 [344 kB] Get:45 http://deb.debian.org/debian forky/main amd64 libcommons-io-java all 2.22.0-1 [570 kB] Get:46 http://deb.debian.org/debian forky/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get:47 http://deb.debian.org/debian forky/main amd64 libmpj-java all 0.44+dfsg-4 [447 kB] Get:48 http://deb.debian.org/debian forky/main amd64 ca-certificates-java all 20260311 [11.2 kB] Get:49 http://deb.debian.org/debian forky/main amd64 java-common all 0.77 [6620 B] Get:50 http://deb.debian.org/debian forky/main amd64 liblcms2-2 amd64 2.19.1-1 [164 kB] Get:51 http://deb.debian.org/debian forky/main amd64 libjpeg62-turbo amd64 1:3.1.3-4 [213 kB] Get:52 http://deb.debian.org/debian forky/main amd64 libnspr4 amd64 2:4.38.2-1+b1 [110 kB] Get:53 http://deb.debian.org/debian forky/main amd64 libnss3 amd64 2:3.124-1 [1422 kB] Get:54 http://deb.debian.org/debian forky/main amd64 libpcsclite1 amd64 2.5.0-1 [54.8 kB] Get:55 http://deb.debian.org/debian forky/main amd64 openjdk-25-jre-headless amd64 25.0.3+9-2 [53.7 MB] Get:56 http://deb.debian.org/debian forky/main amd64 default-jre-headless amd64 2:1.25-77 [3012 B] Get:57 http://deb.debian.org/debian forky/main amd64 bbmap all 39.20+dfsg-3 [10.8 MB] Get:58 http://deb.debian.org/debian forky/main amd64 libsframe3 amd64 2.46-3 [84.7 kB] Get:59 http://deb.debian.org/debian forky/main amd64 binutils-common amd64 2.46-3 [2632 kB] Get:60 http://deb.debian.org/debian forky/main amd64 libbinutils amd64 2.46-3 [548 kB] Get:61 http://deb.debian.org/debian forky/main amd64 libgprofng0 amd64 2.46-3 [820 kB] Get:62 http://deb.debian.org/debian forky/main amd64 libctf-nobfd0 amd64 2.46-3 [160 kB] Get:63 http://deb.debian.org/debian forky/main amd64 libctf0 amd64 2.46-3 [92.2 kB] Get:64 http://deb.debian.org/debian forky/main amd64 libjansson4 amd64 2.14-2+b4 [40.1 kB] Get:65 http://deb.debian.org/debian forky/main amd64 binutils-x86-64-linux-gnu amd64 2.46-3 [1058 kB] Get:66 http://deb.debian.org/debian forky/main amd64 binutils amd64 2.46-3 [282 kB] Get:67 http://deb.debian.org/debian forky/main amd64 libc-dev-bin amd64 2.42-16 [37.9 kB] Get:68 http://deb.debian.org/debian forky/main amd64 linux-libc-dev all 7.0.10-1 [1994 kB] Get:69 http://deb.debian.org/debian forky/main amd64 rpcsvc-proto amd64 1.4.4-1 [63.4 kB] Get:70 http://deb.debian.org/debian forky/main amd64 libc6-dev amd64 2.42-16 [1996 kB] Get:71 http://deb.debian.org/debian forky/main amd64 gcc-15-base amd64 15.2.0-17 [36.8 kB] Get:72 http://deb.debian.org/debian forky/main amd64 libisl23 amd64 0.27-2 [664 kB] Get:73 http://deb.debian.org/debian forky/main amd64 libmpfr6 amd64 4.2.2-3 [729 kB] Get:74 http://deb.debian.org/debian forky/main amd64 libmpc3 amd64 1.3.1-3 [52.2 kB] Get:75 http://deb.debian.org/debian forky/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-17 [12.1 MB] Get:76 http://deb.debian.org/debian forky/main amd64 cpp-15 amd64 15.2.0-17 [1276 B] Get:77 http://deb.debian.org/debian forky/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-5 [5324 B] Get:78 http://deb.debian.org/debian forky/main amd64 cpp amd64 4:15.2.0-5 [1564 B] Get:79 http://deb.debian.org/debian forky/main amd64 libcc1-0 amd64 16.1.0-1 [46.1 kB] Get:80 http://deb.debian.org/debian forky/main amd64 libgomp1 amd64 16.1.0-1 [151 kB] Get:81 http://deb.debian.org/debian forky/main amd64 libitm1 amd64 16.1.0-1 [27.0 kB] Get:82 http://deb.debian.org/debian forky/main amd64 libatomic1 amd64 16.1.0-1 [10.4 kB] Get:83 http://deb.debian.org/debian forky/main amd64 libasan8 amd64 16.1.0-1 [2888 kB] Get:84 http://deb.debian.org/debian forky/main amd64 liblsan0 amd64 16.1.0-1 [1281 kB] Get:85 http://deb.debian.org/debian forky/main amd64 libtsan2 amd64 16.1.0-1 [2572 kB] Get:86 http://deb.debian.org/debian forky/main amd64 libubsan1 amd64 16.1.0-1 [1136 kB] Get:87 http://deb.debian.org/debian forky/main amd64 libhwasan0 amd64 16.1.0-1 [1580 kB] Get:88 http://deb.debian.org/debian forky/main amd64 libquadmath0 amd64 16.1.0-1 [148 kB] Get:89 http://deb.debian.org/debian forky/main amd64 libgcc-15-dev amd64 15.2.0-17 [2718 kB] Get:90 http://deb.debian.org/debian forky/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-17 [23.4 MB] Get:91 http://deb.debian.org/debian forky/main amd64 gcc-15 amd64 15.2.0-17 [542 kB] Get:92 http://deb.debian.org/debian forky/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-5 [1436 B] Get:93 http://deb.debian.org/debian forky/main amd64 gcc amd64 4:15.2.0-5 [5160 B] Get:94 http://deb.debian.org/debian forky/main amd64 libstdc++-15-dev amd64 15.2.0-17 [2780 kB] Get:95 http://deb.debian.org/debian forky/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-17 [13.2 MB] Get:96 http://deb.debian.org/debian forky/main amd64 g++-15 amd64 15.2.0-17 [28.0 kB] Get:97 http://deb.debian.org/debian forky/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-5 [1200 B] Get:98 http://deb.debian.org/debian forky/main amd64 g++ amd64 4:15.2.0-5 [1344 B] Get:99 http://deb.debian.org/debian forky/main amd64 make amd64 4.4.1-3 [463 kB] Get:100 http://deb.debian.org/debian forky/main amd64 libdpkg-perl all 1.23.7 [669 kB] Get:101 http://deb.debian.org/debian forky/main amd64 patch amd64 2.8-2 [134 kB] Get:102 http://deb.debian.org/debian forky/main amd64 dpkg-dev all 1.23.7 [1318 kB] Get:103 http://deb.debian.org/debian forky/main amd64 build-essential amd64 12.12 [4624 B] Get:104 http://deb.debian.org/debian forky/main amd64 libdivsufsort3 amd64 2.0.1-7+b1 [46.1 kB] Get:105 http://deb.debian.org/debian forky/main amd64 hmmer amd64 3.4+dfsg-3 [1079 kB] Get:106 http://deb.debian.org/debian forky/main amd64 prodigal amd64 1:2.6.3-6 [508 kB] Get:107 http://deb.debian.org/debian forky/main amd64 python3-charset-normalizer amd64 3.4.7-1 [245 kB] Get:108 http://deb.debian.org/debian forky/main amd64 libtcl8.6 amd64 8.6.18+dfsg-1 [1053 kB] Get:109 http://deb.debian.org/debian forky/main amd64 libbrotli1 amd64 1.2.0-3 [320 kB] Get:110 http://deb.debian.org/debian forky/main amd64 libpng16-16t64 amd64 1.6.58-1 [289 kB] Get:111 http://deb.debian.org/debian forky/main amd64 libfreetype6 amd64 2.14.3+dfsg-1 [493 kB] Get:112 http://deb.debian.org/debian forky/main amd64 fonts-dejavu-mono all 2.37-9 [488 kB] Get:113 http://deb.debian.org/debian forky/main amd64 fonts-dejavu-core all 2.37-9 [840 kB] Get:114 http://deb.debian.org/debian forky/main amd64 libfontenc1 amd64 1:1.1.8-1+b3 [23.4 kB] Get:115 http://deb.debian.org/debian forky/main amd64 x11-common all 1:7.7+26 [217 kB] Get:116 http://deb.debian.org/debian forky/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get:117 http://deb.debian.org/debian forky/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get:118 http://deb.debian.org/debian forky/main amd64 fonts-urw-base35 all 20200910-9 [10.8 MB] Get:119 http://deb.debian.org/debian forky/main amd64 fontconfig-config amd64 2.17.1-5 [56.1 kB] Get:120 http://deb.debian.org/debian forky/main amd64 libfontconfig1 amd64 2.17.1-5 [132 kB] Get:121 http://deb.debian.org/debian forky/main amd64 libxau6 amd64 1:1.0.11-1+b2 [20.7 kB] Get:122 http://deb.debian.org/debian forky/main amd64 libxdmcp6 amd64 1:1.1.5-2+b1 [28.2 kB] Get:123 http://deb.debian.org/debian forky/main amd64 libxcb1 amd64 1.17.0-2+b2 [144 kB] Get:124 http://deb.debian.org/debian forky/main amd64 libx11-data all 2:1.8.13-1 [346 kB] Get:125 http://deb.debian.org/debian forky/main amd64 libx11-6 amd64 2:1.8.13-1 [829 kB] Get:126 http://deb.debian.org/debian forky/main amd64 libxrender1 amd64 1:0.9.12-1+b2 [27.7 kB] Get:127 http://deb.debian.org/debian forky/main amd64 libxft2 amd64 2.3.6-1+b5 [54.8 kB] Get:128 http://deb.debian.org/debian forky/main amd64 libxext6 amd64 2:1.3.4-1+b4 [50.7 kB] Get:129 http://deb.debian.org/debian forky/main amd64 libxss1 amd64 1:1.2.3-1+b4 [17.0 kB] Get:130 http://deb.debian.org/debian forky/main amd64 libtk8.6 amd64 8.6.18-1 [801 kB] Get:131 http://deb.debian.org/debian forky/main amd64 python3.13-tk amd64 3.13.12-1 [109 kB] Get:132 http://deb.debian.org/debian forky/main amd64 python3.14-tk amd64 3.14.5-1 [104 kB] Get:133 http://deb.debian.org/debian forky/main amd64 python3-tk amd64 3.13.9-3+b1 [8640 B] Get:134 http://deb.debian.org/debian forky/main amd64 python3-pil.imagetk amd64 12.2.0-1 [83.4 kB] Get:135 http://deb.debian.org/debian forky/main amd64 libaom3 amd64 3.13.1-2+b1 [1904 kB] Get:136 http://deb.debian.org/debian forky/main amd64 libdav1d7 amd64 1.5.3-1+b2 [563 kB] Get:137 http://deb.debian.org/debian forky/main amd64 libabsl20260107 amd64 20260107.0-5 [549 kB] Get:138 http://deb.debian.org/debian forky/main amd64 libgav1-2 amd64 0.20.0-2+b1 [372 kB] Get:139 http://deb.debian.org/debian forky/main amd64 librav1e0.8 amd64 0.8.1-10 [973 kB] Get:140 http://deb.debian.org/debian forky/main amd64 libsvtav1enc4 amd64 4.1.0+dfsg-1 [2414 kB] Get:141 http://deb.debian.org/debian forky/main amd64 libyuv0 amd64 0.0.1922.20260106-1+b1 [175 kB] Get:142 http://deb.debian.org/debian forky/main amd64 libavif16 amd64 1.4.1-1+b1 [147 kB] Get:143 http://deb.debian.org/debian forky/main amd64 libimagequant0 amd64 4.4.1-1+b2 [255 kB] Get:144 http://deb.debian.org/debian forky/main amd64 libopenjp2-7 amd64 2.5.4-1.1 [205 kB] Get:145 http://deb.debian.org/debian forky/main amd64 libfribidi0 amd64 1.0.16-5+b1 [26.2 kB] Get:146 http://deb.debian.org/debian forky/main amd64 libglib2.0-0t64 amd64 2.88.1-2 [1536 kB] Get:147 http://deb.debian.org/debian forky/main amd64 libgraphite2-3 amd64 1.3.15-2 [75.8 kB] Get:148 http://deb.debian.org/debian forky/main amd64 libharfbuzz0b amd64 12.3.2-2+b2 [513 kB] Get:149 http://deb.debian.org/debian forky/main amd64 libraqm0 amd64 0.10.5-1 [13.6 kB] Get:150 http://deb.debian.org/debian forky/main amd64 libdeflate0 amd64 1.25-1 [48.0 kB] Get:151 http://deb.debian.org/debian forky/main amd64 libjbig0 amd64 2.1-6.1+b3 [32.2 kB] Get:152 http://deb.debian.org/debian forky/main amd64 liblerc4 amd64 4.1.0+ds-1 [199 kB] Get:153 http://deb.debian.org/debian forky/main amd64 libsharpyuv0 amd64 1.5.0-0.1+b2 [115 kB] Get:154 http://deb.debian.org/debian forky/main amd64 libwebp7 amd64 1.5.0-0.1+b2 [335 kB] Get:155 http://deb.debian.org/debian forky/main amd64 libtiff6 amd64 4.7.1-2 [357 kB] Get:156 http://deb.debian.org/debian forky/main amd64 libwebpdemux2 amd64 1.5.0-0.1+b2 [113 kB] Get:157 http://deb.debian.org/debian forky/main amd64 libwebpmux3 amd64 1.5.0-0.1+b2 [126 kB] Get:158 http://deb.debian.org/debian forky/main amd64 python3-pil amd64 12.2.0-1 [558 kB] Get:159 http://deb.debian.org/debian forky/main amd64 libpixman-1-0 amd64 0.46.4-1+b2 [259 kB] Get:160 http://deb.debian.org/debian forky/main amd64 libxcb-render0 amd64 1.17.0-2+b2 [115 kB] Get:161 http://deb.debian.org/debian forky/main amd64 libxcb-shm0 amd64 1.17.0-2+b2 [105 kB] Get:162 http://deb.debian.org/debian forky/main amd64 libcairo2 amd64 1.18.4-3+b1 [543 kB] Get:163 http://deb.debian.org/debian forky/main amd64 python3-cairo amd64 1.27.0-2+b1 [132 kB] Get:164 http://deb.debian.org/debian forky/main amd64 python3-freetype all 2.5.1-2 [89.4 kB] Get:165 http://deb.debian.org/debian forky/main amd64 python3-rlpycairo all 0.3.0-4 [10.1 kB] Get:166 http://deb.debian.org/debian forky/main amd64 fonts-dejavu-extra all 2.37-9 [1791 kB] Get:167 http://deb.debian.org/debian forky/main amd64 python3-reportlab all 4.4.10-1 [1173 kB] Get:168 http://deb.debian.org/debian forky/main amd64 sgml-base all 1.31+nmu1 [10.9 kB] Get:169 http://deb.debian.org/debian forky/main amd64 xml-core all 0.20 [20.0 kB] Get:170 http://deb.debian.org/debian forky/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get:171 http://deb.debian.org/debian forky/main amd64 python3-biopython amd64 1.87+dfsg-1 [1629 kB] Get:172 http://deb.debian.org/debian forky/main amd64 python3-dateutil all 2.9.0-4 [79.4 kB] Get:173 http://deb.debian.org/debian forky/main amd64 python3-pytz all 2025.2-6 [31.2 kB] Get:174 http://deb.debian.org/debian forky/main amd64 python3-pandas-lib amd64 2.3.3+dfsg-3+b1 [6581 kB] Get:175 http://deb.debian.org/debian forky/main amd64 python3-pandas all 2.3.3+dfsg-3 [2935 kB] Get:176 http://deb.debian.org/debian forky/main amd64 busco amd64 6.0.0-1 [300 kB] Get:177 http://deb.debian.org/debian forky/main amd64 libfakeroot amd64 1.38.1-1 [29.3 kB] Get:178 http://deb.debian.org/debian forky/main amd64 fakeroot amd64 1.38.1-1 [74.9 kB] Get:179 http://deb.debian.org/debian forky/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get:180 http://deb.debian.org/debian forky/main amd64 fonts-lyx all 2.5.1-1 [190 kB] Get:181 http://deb.debian.org/debian forky/main amd64 isympy-common all 1.14.0-3 [233 kB] Get:182 http://deb.debian.org/debian forky/main amd64 python3-mpmath all 1.4.1-2 [448 kB] Get:183 http://deb.debian.org/debian forky/main amd64 python3-sympy all 1.14.0-3 [4226 kB] Get:184 http://deb.debian.org/debian forky/main amd64 isympy3 all 1.14.0-3 [5176 B] Get:185 http://deb.debian.org/debian forky/main amd64 javascript-common all 12+nmu1 [4864 B] Get:186 http://deb.debian.org/debian forky/main amd64 libsimdutf33 amd64 8.2.0-1 [141 kB] Get:187 http://deb.debian.org/debian forky/main amd64 libada-url0-3 amd64 3.4.4-1 [209 kB] Get:188 http://deb.debian.org/debian forky/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:189 http://deb.debian.org/debian forky/main amd64 libalgorithm-diff-xs-perl amd64 0.04-9 [11.1 kB] Get:190 http://deb.debian.org/debian forky/main amd64 libalgorithm-merge-perl all 0.08-5 [11.8 kB] Get:191 http://deb.debian.org/debian forky/main amd64 libavahi-common-data amd64 0.8-18 [113 kB] Get:192 http://deb.debian.org/debian forky/main amd64 libavahi-common3 amd64 0.8-18 [45.2 kB] Get:193 http://deb.debian.org/debian forky/main amd64 libdbus-1-3 amd64 1.16.2-5 [176 kB] Get:194 http://deb.debian.org/debian forky/main amd64 libavahi-client3 amd64 0.8-18 [49.2 kB] Get:195 http://deb.debian.org/debian forky/main amd64 libsnappy1v5 amd64 1.2.2-2+b2 [29.0 kB] Get:196 http://deb.debian.org/debian forky/main amd64 libblosc1 amd64 1.21.5+ds-2+b2 [48.0 kB] Get:197 http://deb.debian.org/debian forky/main amd64 libblosc2-7 amd64 2.23.1+ds-1 [202 kB] Get:198 http://deb.debian.org/debian forky/main amd64 libcares2 amd64 1.34.6-1+b1 [99.1 kB] Get:199 http://deb.debian.org/debian forky/main amd64 libcom-err2 amd64 1.47.4-1 [19.2 kB] Get:200 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.4.2-1 [480 kB] Get:201 http://deb.debian.org/debian forky/main amd64 libidn2-0 amd64 2.3.8-5 [109 kB] Get:202 http://deb.debian.org/debian forky/main amd64 libp11-kit0 amd64 0.26.2-2 [470 kB] Get:203 http://deb.debian.org/debian forky/main amd64 libtasn1-6 amd64 4.21.0-2+b1 [49.3 kB] Get:204 http://deb.debian.org/debian forky/main amd64 libgnutls30t64 amd64 3.8.13-1 [1546 kB] Get:205 http://deb.debian.org/debian forky/main amd64 libkrb5support0 amd64 1.22.1-2.1 [30.9 kB] Get:206 http://deb.debian.org/debian forky/main amd64 libk5crypto3 amd64 1.22.1-2.1 [78.8 kB] Get:207 http://deb.debian.org/debian forky/main amd64 libkeyutils1 amd64 1.6.3-6+b2 [9348 B] Get:208 http://deb.debian.org/debian forky/main amd64 libkrb5-3 amd64 1.22.1-2.1 [335 kB] Get:209 http://deb.debian.org/debian forky/main amd64 libgssapi-krb5-2 amd64 1.22.1-2.1 [137 kB] Get:210 http://deb.debian.org/debian forky/main amd64 libcups2t64 amd64 2.4.18-1 [252 kB] Get:211 http://deb.debian.org/debian forky/main amd64 libnghttp3-9 amd64 1.15.0-1 [67.2 kB] Get:212 http://deb.debian.org/debian forky/main amd64 libngtcp2-16 amd64 1.22.1-1 [133 kB] Get:213 http://deb.debian.org/debian forky/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-11 [17.2 kB] Get:214 http://deb.debian.org/debian forky/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-11 [55.2 kB] Get:215 http://deb.debian.org/debian forky/main amd64 libldap2 amd64 2.6.10+dfsg-1+b2 [188 kB] Get:216 http://deb.debian.org/debian forky/main amd64 libnghttp2-14 amd64 1.69.0-1 [89.0 kB] Get:217 http://deb.debian.org/debian forky/main amd64 libngtcp2-crypto-ossl0 amd64 1.22.1-1 [23.3 kB] Get:218 http://deb.debian.org/debian forky/main amd64 libpsl5t64 amd64 0.21.5-1 [59.9 kB] Get:219 http://deb.debian.org/debian forky/main amd64 libssh2-1t64 amd64 1.11.1-3 [244 kB] Get:220 http://deb.debian.org/debian forky/main amd64 libcurl4t64 amd64 8.20.0-5 [409 kB] Get:221 http://deb.debian.org/debian forky/main amd64 libdisplay-info3 amd64 0.3.0-1+b1 [78.8 kB] Get:222 http://deb.debian.org/debian forky/main amd64 libdrm-common all 2.4.131-1 [9168 B] Get:223 http://deb.debian.org/debian forky/main amd64 libdrm2 amd64 2.4.131-1+b1 [38.6 kB] Get:224 http://deb.debian.org/debian forky/main amd64 libdrm-amdgpu1 amd64 2.4.131-1+b1 [23.2 kB] Get:225 http://deb.debian.org/debian forky/main amd64 libpciaccess0 amd64 0.17-3+b4 [52.1 kB] Get:226 http://deb.debian.org/debian forky/main amd64 libdrm-intel1 amd64 2.4.131-1+b1 [64.3 kB] Get:227 http://deb.debian.org/debian forky/main amd64 libedit2 amd64 3.1-20260512-1 [93.6 kB] Get:228 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.195-1 [58.1 kB] Get:229 http://deb.debian.org/debian forky/main amd64 libexpat1-dev amd64 2.8.1-1 [172 kB] Get:230 http://deb.debian.org/debian forky/main amd64 libfile-fcntllock-perl amd64 0.22-4+b4 [34.6 kB] Get:231 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.15.2+dfsg-0.1 [641 kB] Get:232 http://deb.debian.org/debian forky/main amd64 libz3-4 amd64 4.13.3-1.1 [8644 kB] Get:233 http://deb.debian.org/debian forky/main amd64 libllvm21 amd64 1:21.1.8-7+b1 [28.2 MB] Get:234 http://deb.debian.org/debian forky/main amd64 libsensors-config all 1:3.6.2-2 [16.2 kB] Get:235 http://deb.debian.org/debian forky/main amd64 libsensors5 amd64 1:3.6.2-2+b2 [37.2 kB] Get:236 http://deb.debian.org/debian forky/main amd64 libx11-xcb1 amd64 2:1.8.13-1 [250 kB] Get:237 http://deb.debian.org/debian forky/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b2 [107 kB] Get:238 http://deb.debian.org/debian forky/main amd64 libxcb-present0 amd64 1.17.0-2+b2 [106 kB] Get:239 http://deb.debian.org/debian forky/main amd64 libxcb-randr0 amd64 1.17.0-2+b2 [117 kB] Get:240 http://deb.debian.org/debian forky/main amd64 libxcb-sync1 amd64 1.17.0-2+b2 [109 kB] Get:241 http://deb.debian.org/debian forky/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b2 [109 kB] Get:242 http://deb.debian.org/debian forky/main amd64 libxshmfence1 amd64 1.3.3-1+b2 [11.2 kB] Get:243 http://deb.debian.org/debian forky/main amd64 mesa-libgallium amd64 26.0.6-1 [10.4 MB] Get:244 http://deb.debian.org/debian forky/main amd64 libgbm1 amd64 26.0.6-1 [54.7 kB] Get:245 http://deb.debian.org/debian forky/main amd64 libgpg-error0 amd64 1.59-4 [88.5 kB] Get:246 http://deb.debian.org/debian forky/main amd64 libgcrypt20 amd64 1.12.2-1 [903 kB] Get:247 http://deb.debian.org/debian forky/main amd64 libglvnd0 amd64 1.7.0-3+b1 [54.3 kB] Get:248 http://deb.debian.org/debian forky/main amd64 libvulkan1 amd64 1.4.341.0-1 [141 kB] Get:249 http://deb.debian.org/debian forky/main amd64 libgl1-mesa-dri amd64 26.0.6-1 [43.6 kB] Get:250 http://deb.debian.org/debian forky/main amd64 libxcb-glx0 amd64 1.17.0-2+b2 [122 kB] Get:251 http://deb.debian.org/debian forky/main amd64 libxxf86vm1 amd64 1:1.1.4-2+b1 [20.2 kB] Get:252 http://deb.debian.org/debian forky/main amd64 libglx-mesa0 amd64 26.0.6-1 [125 kB] Get:253 http://deb.debian.org/debian forky/main amd64 libglx0 amd64 1.7.0-3+b1 [34.9 kB] Get:254 http://deb.debian.org/debian forky/main amd64 libgl1 amd64 1.7.0-3+b1 [87.1 kB] Get:255 http://deb.debian.org/debian forky/main amd64 libglib2.0-data all 2.88.1-2 [1278 kB] Get:256 http://deb.debian.org/debian forky/main amd64 libgpg-error-l10n all 1.59-4 [118 kB] Get:257 http://deb.debian.org/debian forky/main amd64 libgpm2 amd64 1.20.7-12+b2 [13.9 kB] Get:258 http://deb.debian.org/debian forky/main amd64 libharfbuzz-subset0 amd64 12.3.2-2+b2 [574 kB] Get:259 http://deb.debian.org/debian forky/main amd64 libsz2 amd64 1.1.7-1 [18.7 kB] Get:260 http://deb.debian.org/debian forky/main amd64 libhdf5-310 amd64 1.14.6+repack-2+b1 [1357 kB] Get:261 http://deb.debian.org/debian forky/main amd64 libxnvctrl0 amd64 535.171.04-1+b3 [14.1 kB] Get:262 http://deb.debian.org/debian forky/main amd64 libze1 amd64 1.28.2-2 [795 kB] Get:263 http://deb.debian.org/debian forky/main amd64 ocl-icd-libopencl1 amd64 2.3.4-1+b1 [42.8 kB] Get:264 http://deb.debian.org/debian forky/main amd64 libhwloc15 amd64 2.13.0-2 [165 kB] Get:265 http://deb.debian.org/debian forky/main amd64 libhwloc-plugins amd64 2.13.0-2 [23.5 kB] Get:266 http://deb.debian.org/debian forky/main amd64 libicu78 amd64 78.3-2 [10.0 MB] Get:267 http://deb.debian.org/debian forky/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Get:268 http://deb.debian.org/debian forky/main amd64 libjs-sphinxdoc all 9.1.0-4 [45.7 kB] Get:269 http://deb.debian.org/debian forky/main amd64 libldap-common all 2.6.10+dfsg-1 [35.1 kB] Get:270 http://deb.debian.org/debian forky/main amd64 libllhttp9.4 amd64 9.4.1+~cs12.11.9-3 [29.9 kB] Get:271 http://deb.debian.org/debian forky/main amd64 liblmdb0 amd64 0.9.31-1+b3 [46.1 kB] Get:272 http://deb.debian.org/debian forky/main amd64 liblzo2-2 amd64 2.10-3+b2 [57.4 kB] Get:273 http://deb.debian.org/debian forky/main amd64 libmbedcrypto16 amd64 3.6.6-0.1 [365 kB] Get:274 http://deb.debian.org/debian forky/main amd64 libmbedx509-7 amd64 3.6.6-0.1 [154 kB] Get:275 http://deb.debian.org/debian forky/main amd64 libmbedtls21 amd64 3.6.6-0.1 [248 kB] Get:276 http://deb.debian.org/debian forky/main amd64 ncbi-vdb-data all 3.2.1+dfsg-2 [88.5 kB] Get:277 http://deb.debian.org/debian forky/main amd64 libncbi-vdb3 amd64 3.2.1+dfsg-2+b1 [1180 kB] Get:278 http://deb.debian.org/debian forky/main amd64 libsimdjson33 amd64 4.6.4-1 [76.9 kB] Get:279 http://deb.debian.org/debian forky/main amd64 libuv1t64 amd64 1.52.1-4 [158 kB] Get:280 http://deb.debian.org/debian forky/main amd64 node-corepack all 0.24.0-5 [712 kB] Get:281 http://deb.debian.org/debian forky/main amd64 nodejs amd64 24.15.0+dfsg+~cs24.12.2-1+b1 [389 kB] Get:282 http://deb.debian.org/debian forky/main amd64 node-xtend all 4.0.2-3 [3932 B] Get:283 http://deb.debian.org/debian forky/main amd64 node-acorn all 8.16.0+ds+~cs25.18.7-4 [132 kB] Get:284 http://deb.debian.org/debian forky/main amd64 node-balanced-match all 2.0.0-1 [4872 B] Get:285 http://deb.debian.org/debian forky/main amd64 node-brace-expansion all 2.0.3+~1.1.2-2 [7748 B] Get:286 http://deb.debian.org/debian forky/main amd64 node-minimatch all 9.0.7-1 [53.0 kB] Get:287 http://deb.debian.org/debian forky/main amd64 node-ms all 2.1.3+~cs0.7.31-3 [5648 B] Get:288 http://deb.debian.org/debian forky/main amd64 node-debug all 4.4.3+~4.1.13-1 [16.3 kB] Get:289 http://deb.debian.org/debian forky/main amd64 node-lru-cache all 11.2.7-6 [64.1 kB] Get:290 http://deb.debian.org/debian forky/main amd64 node-semver all 7.7.4+~cs9.7.4-1 [52.6 kB] Get:291 http://deb.debian.org/debian forky/main amd64 node-llhttp all 9.4.1+~cs12.11.9-3 [158 kB] Get:292 http://deb.debian.org/debian forky/main amd64 node-undici all 7.24.6+dfsg+~cs3.2.0-3 [411 kB] Get:293 http://deb.debian.org/debian forky/main amd64 libnode137 amd64 24.15.0+dfsg+~cs24.12.2-1+b1 [14.7 MB] Get:294 http://deb.debian.org/debian forky/main amd64 libpython3.13 amd64 3.13.12-1 [2187 kB] Get:295 http://deb.debian.org/debian forky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.2-3 [918 kB] Get:296 http://deb.debian.org/debian forky/main amd64 libpython3.13-dev amd64 3.13.12-1 [5298 kB] Get:297 http://deb.debian.org/debian forky/main amd64 libpython3-dev amd64 3.13.9-3+b1 [8588 B] Get:298 http://deb.debian.org/debian forky/main amd64 libqhull-r8.0 amd64 2020.2-9 [248 kB] Get:299 http://deb.debian.org/debian forky/main amd64 libsasl2-modules amd64 2.1.28+dfsg1-11 [64.5 kB] Get:300 http://deb.debian.org/debian forky/main amd64 libskia146 amd64 146.20260414~git.ef5f213+dfsg-5 [2563 kB] Get:301 http://deb.debian.org/debian forky/main amd64 libtbbbind-2-5 amd64 2022.3.0-2 [14.6 kB] Get:302 http://deb.debian.org/debian forky/main amd64 libtbbmalloc2 amd64 2022.3.0-2 [51.0 kB] Get:303 http://deb.debian.org/debian forky/main amd64 libtbb12 amd64 2022.3.0-2 [97.8 kB] Get:304 http://deb.debian.org/debian forky/main amd64 libwayland-client0 amd64 1.24.0-2+b2 [28.8 kB] Get:305 http://deb.debian.org/debian forky/main amd64 libxslt1.1 amd64 1.1.45-0.1 [158 kB] Get:306 http://deb.debian.org/debian forky/main amd64 libyaml-0-2 amd64 0.2.5-2+b1 [53.8 kB] Get:307 http://deb.debian.org/debian forky/main amd64 manpages-dev all 6.18-1 [2207 kB] Get:308 http://deb.debian.org/debian forky/main amd64 mesa-vulkan-drivers amd64 26.0.6-1 [17.3 MB] Get:309 http://deb.debian.org/debian forky/main amd64 ncbi-data all 6.1.20170106+dfsg2-7 [3540 kB] Get:310 http://deb.debian.org/debian forky/main amd64 ncbi-blast+ amd64 2.17.0+ds-7 [17.0 MB] Get:311 http://deb.debian.org/debian forky/main amd64 node-commander all 14.0.3-7 [76.8 kB] Get:312 http://deb.debian.org/debian forky/main amd64 node-mj-context-menu all 0.9.1+ds-2 [69.9 kB] Get:313 http://deb.debian.org/debian forky/main amd64 node-xmldom all 0.9.9-1 [80.5 kB] Get:314 http://deb.debian.org/debian forky/main amd64 node-speech-rule-engine all 4.1.4+~0.1.31-1 [564 kB] Get:315 http://deb.debian.org/debian forky/main amd64 node-mathjax-full all 3.2.2+~cs4.2.1-5 [3682 kB] Get:316 http://deb.debian.org/debian forky/main amd64 nodejs-doc all 24.15.0+dfsg+~cs24.12.2-1 [7082 kB] Get:317 http://deb.debian.org/debian forky/main amd64 sphinx-rtd-theme-common all 3.1.0+dfsg-1 [1024 kB] Get:318 http://deb.debian.org/debian forky/main amd64 numba-doc all 0.65.1+dfsg-3 [1051 kB] Get:319 http://deb.debian.org/debian forky/main amd64 publicsuffix all 20260428.1050-1 [321 kB] Get:320 http://deb.debian.org/debian forky/main amd64 python-babel-localedata all 2.17.0-2 [6052 kB] Get:321 http://deb.debian.org/debian forky/main amd64 python-biopython-doc all 1.87+dfsg-1 [18.1 MB] Get:322 http://deb.debian.org/debian forky/main amd64 python-matplotlib-data all 3.10.7+dfsg1-5 [2734 kB] Get:323 http://deb.debian.org/debian forky/main amd64 python-odf-doc all 1.4.2-4 [5344 kB] Get:324 http://deb.debian.org/debian forky/main amd64 python3-legacy-cgi all 2.6.4-2 [16.9 kB] Get:325 http://deb.debian.org/debian forky/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB] Get:326 http://deb.debian.org/debian forky/main amd64 python3-odf all 1.4.2-4 [78.4 kB] Get:327 http://deb.debian.org/debian forky/main amd64 python-odf-tools all 1.4.2-4 [28.4 kB] Get:328 http://deb.debian.org/debian forky/main amd64 python-tables-data all 3.11.1-1 [45.8 kB] Get:329 http://deb.debian.org/debian forky/main amd64 python3-attr all 26.1.0-1 [72.2 kB] Get:330 http://deb.debian.org/debian forky/main amd64 python3-babel all 2.17.0-2 [117 kB] Get:331 http://deb.debian.org/debian forky/main amd64 python3-bottleneck amd64 1.4.2+ds1-2+b2 [99.3 kB] Get:332 http://deb.debian.org/debian forky/main amd64 python3-brotli amd64 1.2.0-3 [336 kB] Get:333 http://deb.debian.org/debian forky/main amd64 python3-soupsieve all 2.8.4-1 [38.7 kB] Get:334 http://deb.debian.org/debian forky/main amd64 python3-typing-extensions all 4.15.0-2 [92.5 kB] Get:335 http://deb.debian.org/debian forky/main amd64 python3-bs4 all 4.14.3-2 [118 kB] Get:336 http://deb.debian.org/debian forky/main amd64 python3-certifi all 2026.5.20+ds-1 [9712 B] Get:337 http://deb.debian.org/debian forky/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get:338 http://deb.debian.org/debian forky/main amd64 python3-contourpy amd64 1.3.3-1+b1 [295 kB] Get:339 http://deb.debian.org/debian forky/main amd64 python3-cpuinfo all 9.0.0+git20221119-3 [23.5 kB] Get:340 http://deb.debian.org/debian forky/main amd64 python3-cssselect all 1.4.0-1 [22.1 kB] Get:341 http://deb.debian.org/debian forky/main amd64 python3-cycler all 0.12.1-2 [9616 B] Get:342 http://deb.debian.org/debian forky/main amd64 python3-decorator all 5.2.1-2 [33.0 kB] Get:343 http://deb.debian.org/debian forky/main amd64 python3.13-dev amd64 3.13.12-1 [504 kB] Get:344 http://deb.debian.org/debian forky/main amd64 python3-dev amd64 3.13.9-3+b1 [29.8 kB] Get:345 http://deb.debian.org/debian forky/main amd64 python3-et-xmlfile all 2.0.0-2 [12.9 kB] Get:346 http://deb.debian.org/debian forky/main amd64 python3-lxml amd64 6.1.0-1 [2232 kB] Get:347 http://deb.debian.org/debian forky/main amd64 python3-lz4 amd64 4.4.5+dfsg-1 [26.0 kB] Get:348 http://deb.debian.org/debian forky/main amd64 python3-scipy amd64 1.16.3-4 [18.6 MB] Get:349 http://deb.debian.org/debian forky/main amd64 python3-ufolib2 all 0.18.1+dfsg1-1 [33.2 kB] Get:350 http://deb.debian.org/debian forky/main amd64 python3-uharfbuzz amd64 0.53.3-1+b1 [219 kB] Get:351 http://deb.debian.org/debian forky/main amd64 python3-unicodedata2 amd64 17.0.1+ds-1 [327 kB] Get:352 http://deb.debian.org/debian forky/main amd64 python3-zopfli amd64 0.4.2-1 [10.7 kB] Get:353 http://deb.debian.org/debian forky/main amd64 unicode-data all 17.0.0-2 [9354 kB] Get:354 http://deb.debian.org/debian forky/main amd64 python3-fonttools amd64 4.62.1-7 [1682 kB] Get:355 http://deb.debian.org/debian forky/main amd64 python3-webencodings all 0.5.1-5 [11.1 kB] Get:356 http://deb.debian.org/debian forky/main amd64 python3-html5lib all 1.2-3 [92.1 kB] Get:357 http://deb.debian.org/debian forky/main amd64 python3-idna all 3.11-1 [41.7 kB] Get:358 http://deb.debian.org/debian forky/main amd64 python3-markupsafe amd64 3.0.3-1+b1 [14.3 kB] Get:359 http://deb.debian.org/debian forky/main amd64 python3-jinja2 all 3.1.6-2 [106 kB] Get:360 http://deb.debian.org/debian forky/main amd64 python3-kiwisolver amd64 1.5.0-1 [72.4 kB] Get:361 http://deb.debian.org/debian forky/main amd64 python3-llvmlite amd64 0.47.0-0.1 [22.9 MB] Get:362 http://deb.debian.org/debian forky/main amd64 python3-pyparsing all 3.3.2-2 [165 kB] Get:363 http://deb.debian.org/debian forky/main amd64 python3-packaging all 26.0-1 [64.3 kB] Get:364 http://deb.debian.org/debian forky/main amd64 python3-matplotlib amd64 3.10.7+dfsg1-5 [22.8 MB] Get:365 http://deb.debian.org/debian forky/main amd64 python3-numba amd64 0.65.1+dfsg-3 [1808 kB] Get:366 http://deb.debian.org/debian forky/main amd64 python3-numexpr amd64 2.14.1-1+b1 [145 kB] Get:367 http://deb.debian.org/debian forky/main amd64 python3-olefile all 0.47-1 [39.3 kB] Get:368 http://deb.debian.org/debian forky/main amd64 python3-openpyxl all 3.1.5+dfsg-4 [166 kB] Get:369 http://deb.debian.org/debian forky/main amd64 python3-wheel all 0.47.0-1 [26.9 kB] Get:370 http://deb.debian.org/debian forky/main amd64 python3-pip all 26.1.1+dfsg-1 [1406 kB] Get:371 http://deb.debian.org/debian forky/main amd64 python3-platformdirs all 4.10.0-1 [18.3 kB] Get:372 http://deb.debian.org/debian forky/main amd64 python3-urllib3 all 2.6.3-2 [118 kB] Get:373 http://deb.debian.org/debian forky/main amd64 python3-requests all 2.32.5+dfsg-1 [72.4 kB] Get:374 http://deb.debian.org/debian forky/main amd64 python3-pooch all 1.9.0-1 [62.8 kB] Get:375 http://deb.debian.org/debian forky/main amd64 python3-skia-pathops amd64 0.9.2-2 [141 kB] Get:376 http://deb.debian.org/debian forky/main amd64 python3-tables-lib amd64 3.11.1-1 [709 kB] Get:377 http://deb.debian.org/debian forky/main amd64 python3-tables all 3.11.1-1 [354 kB] Get:378 http://deb.debian.org/debian forky/main amd64 python3-tqdm all 4.67.3-1 [91.8 kB] Get:379 http://deb.debian.org/debian forky/main amd64 python3-yaml amd64 6.0.3-1 [186 kB] Get:380 http://deb.debian.org/debian forky/main amd64 shared-mime-info amd64 2.4-5+b3 [758 kB] Get:381 http://deb.debian.org/debian forky/main amd64 sq amd64 1.3.1-9+b1 [5689 kB] Get:382 http://deb.debian.org/debian forky/main amd64 xdg-user-dirs amd64 0.20-1 [41.9 kB] Preconfiguring packages ... 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Setting up libz3-4:amd64 (4.13.3-1.1) ... Setting up libblas3:amd64 (3.12.1-7+b2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libglib2.0-data (2.88.1-2) ... Setting up rpcsvc-proto (1.4.4-1) ... Setting up libasound2t64:amd64 (1.2.15.3-1+b1) ... Setting up libjpeg62-turbo:amd64 (1:3.1.3-4) ... Setting up libzopfli1 (1.0.3-3) ... Setting up libx11-data (2:1.8.13-1) ... Setting up make (4.4.1-3) ... Setting up libmpfr6:amd64 (4.2.2-3) ... Setting up libnspr4:amd64 (2:4.38.2-1+b1) ... Setting up libxcb-sync1:amd64 (1.17.0-2+b2) ... Setting up node-balanced-match (2.0.0-1) ... Setting up node-brace-expansion (2.0.3+~1.1.2-2) ... Setting up libapache-pom-java (33-2) ... Setting up libavahi-common-data:amd64 (0.8-18) ... Setting up libdbus-1-3:amd64 (1.16.2-5) ... Setting up xz-utils (5.8.3-1) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:amd64 (1.0.16-5+b1) ... Setting up libquadmath0:amd64 (16.1.0-1) ... Setting up libsimdjson33:amd64 (4.6.4-1) ... Setting up libimagequant0:amd64 (4.4.1-1+b2) ... Setting up libunistring5:amd64 (1.4.2-1) ... Setting up fonts-dejavu-mono (2.37-9) ... Setting up libpng16-16t64:amd64 (1.6.58-1) ... Setting up libhwloc15:amd64 (2.13.0-2) ... Setting up libcares2:amd64 (1.34.6-1+b1) ... Setting up libmpc3:amd64 (1.3.1-3) ... Setting up python3-numpy-dev:amd64 (1:2.3.5+ds-3+b1) ... Setting up libatomic1:amd64 (16.1.0-1) ... Setting up patch (2.8-2) ... Setting up libtcl8.6:amd64 (8.6.18+dfsg-1) ... Setting up fonts-dejavu-core (2.37-9) ... Setting up libpcsclite1:amd64 (2.5.0-1) ... Setting up libsensors5:amd64 (1:3.6.2-2+b2) ... Setting up libncursesw6:amd64 (6.6+20251231-1+b1) ... Setting up libk5crypto3:amd64 (1.22.1-2.1) ... Setting up libsvtav1enc4:amd64 (4.1.0+dfsg-1) ... Setting up libjs-sphinxdoc (9.1.0-4) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-11) ... Setting up libblosc2-7:amd64 (2.23.1+ds-1) ... Setting up libgfortran5:amd64 (16.1.0-1) ... Setting up libvulkan1:amd64 (1.4.341.0-1) ... Setting up libnghttp3-9:amd64 (1.15.0-1) ... Setting up nodejs-doc (24.15.0+dfsg+~cs24.12.2-1) ... Setting up libwebp7:amd64 (1.5.0-0.1+b2) ... Setting up libubsan1:amd64 (16.1.0-1) ... Setting up node-commander (14.0.3-7) ... Setting up libffi8:amd64 (3.5.2-4) ... Setting up fonts-dejavu-extra (2.37-9) ... Setting up alsa-topology-conf (1.2.5.1-3) ... Setting up libdav1d7:amd64 (1.5.3-1+b2) ... Setting up perl-modules-5.40 (5.40.1-7) ... Setting up ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Setting up libxshmfence1:amd64 (1.3.3-1+b2) ... Setting up libhwasan0:amd64 (16.1.0-1) ... Setting up pigz (2.8-2) ... Setting up libtiff6:amd64 (4.7.1-2) ... Setting up libxcb-randr0:amd64 (1.17.0-2+b2) ... Setting up libasan8:amd64 (16.1.0-1) ... Setting up sse4.2-support (27+b1) ... Setting up libxslt1.1:amd64 (1.1.45-0.1) ... Setting up libblosc1:amd64 (1.21.5+ds-2+b2) ... Setting up libtasn1-6:amd64 (4.21.0-2+b1) ... Setting up libada-url0-3:amd64 (3.4.4-1) ... Setting up libopenjp2-7:amd64 (2.5.4-1.1) ... Setting up libx11-6:amd64 (2:1.8.13-1) ... Setting up ncbi-vdb-data (3.2.1+dfsg-2) ... Setting up libabsl20260107:amd64 (20260107.0-5) ... Setting up netbase (6.5) ... Setting up libngtcp2-16:amd64 (1.22.1-1) ... Setting up sgml-base (1.31+nmu1) ... Setting up libkrb5-3:amd64 (1.22.1-2.1) ... Setting up node-minimatch (9.0.7-1) ... Setting up libmbedcrypto16:amd64 (3.6.6-0.1) ... Setting up libssh2-1t64:amd64 (1.11.1-3) ... Setting up libtsan2:amd64 (16.1.0-1) ... Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... Setting up libbinutils:amd64 (2.46-3) ... Setting up node-xtend (4.0.2-3) ... Setting up libisl23:amd64 (0.27-2) ... Setting up libc-dev-bin (2.42-16) ... Setting up gcc-15-base:amd64 (15.2.0-17) ... Setting up libdivsufsort3:amd64 (2.0.1-7+b1) ... Setting up python-matplotlib-data (3.10.7+dfsg1-5) ... Setting up openssl (3.6.2-1) ... Setting up libwebpmux3:amd64 (1.5.0-0.1+b2) ... Setting up libgpg-error-l10n (1.59-4) ... Setting up libdrm-common (2.4.131-1) ... Setting up libyuv0:amd64 (0.0.1922.20260106-1+b1) ... Setting up readline-common (8.3-4) ... Setting up publicsuffix (20260428.1050-1) ... Setting up python-tables-data (3.11.1-1) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up sphinx-rtd-theme-common (3.1.0+dfsg-1) ... Setting up libcc1-0:amd64 (16.1.0-1) ... Setting up libldap2:amd64 (2.6.10+dfsg-1+b2) ... Setting up liblocale-gettext-perl (1.07-10) ... Setting up liblsan0:amd64 (16.1.0-1) ... Setting up libsz2:amd64 (1.1.7-1) ... Setting up libitm1:amd64 (16.1.0-1) ... Setting up libwayland-client0:amd64 (1.24.0-2+b2) ... Setting up libctf0:amd64 (2.46-3) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2+b2) ... Setting up manpages-dev (6.18-1) ... Setting up libx11-xcb1:amd64 (2:1.8.13-1) ... Setting up liblapack3:amd64 (3.12.1-7+b2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libgcc-15-dev:amd64 (15.2.0-17) ... Setting up libxrender1:amd64 (1:0.9.12-1+b2) ... Setting up alsa-ucm-conf (1.2.15.3-1) ... Setting up fontconfig-config (2.17.1-5) ... Setting up libwebpdemux2:amd64 (1.5.0-0.1+b2) ... Setting up libcommons-parent-java (56-1) ... Setting up libavahi-common3:amd64 (0.8-18) ... Setting up libxext6:amd64 (2:1.3.4-1+b4) ... Setting up libidn2-0:amd64 (2.3.8-5) ... Setting up libnss3:amd64 (2:3.124-1) ... Setting up sq (1.3.1-9+b1) ... Setting up cpp-15-x86-64-linux-gnu (15.2.0-17) ... Setting up libxxf86vm1:amd64 (1:1.1.4-2+b1) ... Setting up libtbbbind-2-5:amd64 (2022.3.0-2) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b3) ... Setting up libperl5.40:amd64 (5.40.1-7+b1) ... Setting up ca-certificates (20260223) ... Updating certificates in /etc/ssl/certs... 144 added, 0 removed; done. Setting up perl (5.40.1-7+b1) ... Setting up libglib2.0-0t64:amd64 (2.88.1-2) ... No schema files found: doing nothing. Setting up libgprofng0:amd64 (2.46-3) ... Setting up libmbedx509-7:amd64 (3.6.6-0.1) ... Setting up libfreetype6:amd64 (2.14.3+dfsg-1) ... Setting up libllvm21:amd64 (1:21.1.8-7+b1) ... Setting up shared-mime-info (2.4-5+b3) ... Setting up python-odf-doc (1.4.2-4) ... Setting up libp11-kit0:amd64 (0.26.2-2) ... Setting up libgssapi-krb5-2:amd64 (1.22.1-2.1) ... Setting up libngtcp2-crypto-ossl0:amd64 (1.22.1-1) ... Setting up libdpkg-perl (1.23.7) ... Setting up libmbedtls21:amd64 (3.6.6-0.1) ... Setting up libreadline8t64:amd64 (8.3-4) ... Setting up libgav1-2:amd64 (0.20.0-2+b1) ... Setting up libdrm2:amd64 (2.4.131-1+b1) ... Setting up cpp-15 (15.2.0-17) ... Setting up xml-core (0.20) ... Setting up hmmer (3.4+dfsg-3) ... Setting up libc6-dev:amd64 (2.42-16) ... Setting up libharfbuzz0b:amd64 (12.3.2-2+b2) ... Setting up libxss1:amd64 (1:1.2.3-1+b4) ... Setting up libfontconfig1:amd64 (2.17.1-5) ... Setting up numba-doc (0.65.1+dfsg-3) ... Setting up ca-certificates-java (20260311) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-codec-java (1.22.0-1) ... Setting up libpython3.13-stdlib:amd64 (3.13.12-1) ... Setting up libavahi-client3:amd64 (0.8-18) ... Setting up libpython3-stdlib:amd64 (3.13.9-3+b1) ... Setting up binutils-x86-64-linux-gnu (2.46-3) ... Setting up libdrm-amdgpu1:amd64 (2.4.131-1+b1) ... Setting up libpython3.13:amd64 (3.13.12-1) ... Setting up cpp-x86-64-linux-gnu (4:15.2.0-5) ... Setting up libgnutls30t64:amd64 (3.8.13-1) ... Setting up mesa-vulkan-drivers:amd64 (26.0.6-1) ... Setting up libavif16:amd64 (1.4.1-1+b1) ... Setting up libxft2:amd64 (2.3.6-1+b5) ... Setting up libfile-fcntllock-perl (0.22-4+b4) ... Setting up python3.13 (3.13.12-1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libcommons-io-java (2.22.0-1) ... Setting up libtk8.6:amd64 (8.6.18-1) ... Setting up openjdk-25-jre-headless:amd64 (25.0.3+9-2) ... update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libdrm-intel1:amd64 (2.4.131-1+b1) ... Setting up libpsl5t64:amd64 (0.21.5-1) ... Setting up libncbi-vdb3:amd64 (3.2.1+dfsg-2+b1) ... Setting up python3 (3.13.9-3+b1) ... Setting up libtbb12:amd64 (2022.3.0-2) ... Setting up binutils (2.46-3) ... Setting up python3-freetype (2.5.1-2) ... Setting up xfonts-utils (1:7.7+7) ... Setting up libhwloc-plugins:amd64 (2.13.0-2) ... Setting up python3-markupsafe (3.0.3-1+b1) ... Setting up python3-webencodings (0.5.1-5) ... Setting up libcairo2:amd64 (1.18.4-3+b1) ... Setting up python3.13-tk (3.13.12-1) ... Setting up python3-platformdirs (4.10.0-1) ... Setting up python3-zopfli (0.4.2-1) ... Setting up dpkg-dev (1.23.7) ... Setting up libmpj-java (0.44+dfsg-4) ... Setting up gcc-15-x86-64-linux-gnu (15.2.0-17) ... Setting up ncbi-blast+ (2.17.0+ds-7) ... Setting up python3-llvmlite (0.47.0-0.1) ... Setting up gcc-15 (15.2.0-17) ... Setting up python3-decorator (5.2.1-2) ... Setting up python3-jinja2 (3.1.6-2) ... Setting up python3-packaging (26.0-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up libstdc++-15-dev:amd64 (15.2.0-17) ... Setting up libexpat1-dev:amd64 (2.8.1-1) ... Setting up python3-pyparsing (3.3.2-2) ... Setting up python3-certifi (2026.5.20+ds-1) ... Setting up python3-brotli (1.2.0-3) ... Setting up libraqm0:amd64 (0.10.5-1) ... Setting up python3-cycler (0.12.1-2) ... Setting up python3-kiwisolver (1.5.0-1) ... Setting up python3-idna (3.11-1) ... Setting up python3-typing-extensions (4.15.0-2) ... Setting up python3-cpuinfo (9.0.0+git20221119-3) ... Setting up python3-html5lib (1.2-3) ... Setting up python3-numpy (1:2.3.5+ds-3+b1) ... Setting up python3-urllib3 (2.6.3-2) ... Setting up python3-legacy-cgi (2.6.4-2) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up python3-lxml:amd64 (6.1.0-1) ... Setting up cpp (4:15.2.0-5) ... Setting up python3-et-xmlfile (2.0.0-2) ... Setting up libharfbuzz-subset0:amd64 (12.3.2-2+b2) ... Setting up python3-dateutil (2.9.0-4) ... Setting up python3-contourpy (1.3.3-1+b1) ... Setting up python3-mpmath (1.4.1-2) ... Setting up python3-cssselect (1.4.0-1) ... Setting up libalgorithm-diff-xs-perl (0.04-9) ... Setting up libcups2t64:amd64 (2.4.18-1) ... Setting up python3-soupsieve (2.8.4-1) ... Setting up libalgorithm-merge-perl (0.08-5) ... Setting up python3-sympy (1.14.0-3) ... Setting up python3-attr (26.1.0-1) ... Setting up g++-15-x86-64-linux-gnu (15.2.0-17) ... Setting up mesa-libgallium:amd64 (26.0.6-1) ... Setting up python3.14-tk (3.14.5-1) ... Setting up python3-scipy (1.16.3-4) ... Setting up python3-cairo (1.27.0-2+b1) ... Setting up gcc-x86-64-linux-gnu (4:15.2.0-5) ... Setting up libcurl4t64:amd64 (8.20.0-5) ... Setting up libgbm1:amd64 (26.0.6-1) ... Setting up python3-babel (2.17.0-2) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-lz4 (4.4.5+dfsg-1) ... Setting up python3-defusedxml (0.7.1-3) ... Setting up python3-charset-normalizer (3.4.7-1) ... Setting up python3-unicodedata2 (17.0.1+ds-1) ... Setting up python3-olefile (0.47-1) ... Setting up python3-pandas-lib:amd64 (2.3.3+dfsg-3+b1) ... Setting up python3-tqdm (4.67.3-1) ... Setting up libgl1-mesa-dri:amd64 (26.0.6-1) ... Setting up isympy-common (1.14.0-3) ... Setting up python3-yaml (6.0.3-1) ... Setting up python3-tk (3.13.9-3+b1) ... Setting up python3-pytz (2025.2-6) ... Setting up fonts-urw-base35 (20200910-9) ... Setting up python3-numba (0.65.1+dfsg-3) ... update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode Setting up python3-wheel (0.47.0-1) ... Setting up python3-bs4 (4.14.3-2) ... Setting up gcc (4:15.2.0-5) ... Setting up python3-pil:amd64 (12.2.0-1) ... Setting up python3-pandas (2.3.3+dfsg-3) ... Setting up python3-pil.imagetk:amd64 (12.2.0-1) ... Setting up python3-rlpycairo (0.3.0-4) ... Setting up python3-openpyxl (3.1.5+dfsg-4) ... Setting up isympy3 (1.14.0-3) ... Setting up libpython3.13-dev:amd64 (3.13.12-1) ... Setting up python3-requests (2.32.5+dfsg-1) ... Setting up python3-bottleneck (1.4.2+ds1-2+b2) ... Setting up python3-numexpr (2.14.1-1+b1) ... Setting up python3-uharfbuzz (0.53.3-1+b1) ... Setting up python3-pip (26.1.1+dfsg-1) ... Setting up python3-reportlab (4.4.10-1) ... Setting up libhdf5-310:amd64 (1.14.6+repack-2+b1) ... Setting up g++-x86-64-linux-gnu (4:15.2.0-5) ... Setting up g++-15 (15.2.0-17) ... Setting up python3-odf (1.4.2-4) ... Setting up libglx-mesa0:amd64 (26.0.6-1) ... Setting up libpython3-dev:amd64 (3.13.9-3+b1) ... Setting up libglx0:amd64 (1.7.0-3+b1) ... Setting up python3.13-dev (3.13.12-1) ... Setting up python3-tables-lib (3.11.1-1) ... Setting up python-odf-tools (1.4.2-4) ... Setting up python3-tables (3.11.1-1) ... Setting up libgl1:amd64 (1.7.0-3+b1) ... Setting up python3-pooch (1.9.0-1) ... Setting up python3-dev (3.13.9-3+b1) ... Setting up g++ (4:15.2.0-5) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up build-essential (12.12) ... Setting up libskia146:amd64 (146.20260414~git.ef5f213+dfsg-5) ... Setting up python3-skia-pathops (0.9.2-2) ... Setting up python3-fonttools (4.62.1-7) ... Setting up python3-ufolib2 (0.18.1+dfsg1-1) ... Setting up node-acorn (8.16.0+ds+~cs25.18.7-4) ... Setting up node-ms (2.1.3+~cs0.7.31-3) ... Setting up node-semver (7.7.4+~cs9.7.4-1) ... Setting up node-corepack (0.24.0-5) ... Setting up python3-matplotlib (3.10.7+dfsg1-5) ... Setting up node-debug (4.4.3+~4.1.13-1) ... Setting up node-llhttp (9.4.1+~cs12.11.9-3) ... Setting up node-undici (7.24.6+dfsg+~cs3.2.0-3) ... Setting up libnode137:amd64 (24.15.0+dfsg+~cs24.12.2-1+b1) ... Setting up nodejs (24.15.0+dfsg+~cs24.12.2-1+b1) ... update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode Setting up node-speech-rule-engine (4.1.4+~0.1.31-1) ... Setting up node-mathjax-full (3.2.2+~cs4.2.1-5) ... Setting up python-biopython-doc (1.87+dfsg-1) ... Processing triggers for libc-bin (2.42-16) ... Processing triggers for ca-certificates-java (20260311) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_BR_Root_CA_2_2023.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_2_2023.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_Server_Root_ECC_G1.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_Root_CA12.pem Adding debian:SecureSign_Root_CA14.pem Adding debian:SecureSign_Root_CA15.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_RSA_TLS_Root_CA_2022_-_1.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_CYBER_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:TrustAsia_TLS_ECC_Root_CA.pem Adding debian:TrustAsia_TLS_RSA_Root_CA.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:_OISTE_Server_Root_RSA_G1.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up default-jre-headless (2:1.25-77) ... Setting up bbmap (39.20+dfsg-3) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.87+dfsg-1) ... Setting up busco (6.0.0-1) ... /usr/lib/python3/dist-packages/busco/BuscoPlacer.py:211: SyntaxWarning: invalid escape sequence '\[' "[^0-9][0-9]*:[0-9]*[^0-9]{0,1}[0-9]*[^0-9]{0,2}[0-9]*\[%s\]" Processing triggers for ca-certificates (20260223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20260311) ... done. 2m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', '-y', 'install', 'busco=6.0.0-1'] 2m7.2s INFO: Running scripts post_install 2m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_install_exceptions'] 2m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_install_exceptions'] 2m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'systemd-tmpfiles', '--cat-config'] 2m7.2s DUMP: chroot: failed to run command 'systemd-tmpfiles': No such file or directory 2m7.2s DEBUG: Command failed (status=127), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'systemd-tmpfiles', '--cat-config'] 2m7.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 2m10.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 2m14.0s DEBUG: No broken symlinks as far as we can find. 2m16.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', '-ac', '--ignore-obsolete'] 2m39.5s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', '-ac', '--ignore-obsolete'] 2m39.5s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 2m39.5s DUMP: 0.15.9~deb12u1 2m39.5s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 2m39.5s INFO: Running adequate version 0.15.9~deb12u1 now. 2m39.5s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'busco'] 2m39.6s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'busco'] 2m39.6s INFO: Running scripts pre_remove 2m39.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 2m39.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 2m39.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 2m39.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 2m39.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 2m50.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 2m50.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m50.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m50.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 2m50.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 2m50.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_exceptions'] 2m50.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/pre_remove_exceptions'] 2m50.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 2m50.7s DUMP: install ok installed alsa-topology-conf alsa-topology-conf 1.2.5.1-3 install ok installed alsa-ucm-conf alsa-ucm-conf 1.2.15.3-1 install ok installed apt apt 3.3.1 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-3 install ok installed bbmap bbmap 39.20+dfsg-3 install ok installed binutils binutils 2.46-3 install ok installed binutils-common:amd64 binutils-common 2.46-3 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.46-3 install ok installed bsdutils bsdutils 1:2.42.1-2 install ok installed build-essential build-essential 12.12 install ok installed busco busco 6.0.0-1 install ok installed bzip2 bzip2 1.0.8-6+b2 install ok installed ca-certificates ca-certificates 20260223 install ok installed ca-certificates-java ca-certificates-java 20260311 install ok installed coreutils coreutils 9.10-1 install ok installed cpp cpp 4:15.2.0-5 install ok installed cpp-15 cpp-15 15.2.0-17 install ok installed cpp-15-x86-64-linux-gnu cpp-15-x86-64-linux-gnu 15.2.0-17 install ok installed cpp-x86-64-linux-gnu cpp-x86-64-linux-gnu 4:15.2.0-5 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.23.2 install ok installed default-jre-headless default-jre-headless 2:1.25-77 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.7 install ok installed dpkg-dev dpkg-dev 1.23.7 install ok installed fakeroot fakeroot 1.38.1-1 install ok installed findutils findutils 4.10.0-4 install ok installed fontconfig-config fontconfig-config 2.17.1-5 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-9 install ok installed fonts-dejavu-extra fonts-dejavu-extra 2.37-9 install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-9 install ok installed fonts-font-awesome fonts-font-awesome 5.0.10+really4.7.0~dfsg-4.1 install ok installed fonts-lato fonts-lato 2.015-1 install ok installed fonts-lyx fonts-lyx 2.5.1-1 install ok installed fonts-urw-base35 fonts-urw-base35 20200910-9 install ok installed g++ g++ 4:15.2.0-5 install ok installed g++-15 g++-15 15.2.0-17 install ok installed g++-15-x86-64-linux-gnu g++-15-x86-64-linux-gnu 15.2.0-17 install ok installed g++-x86-64-linux-gnu g++-x86-64-linux-gnu 4:15.2.0-5 install ok installed gcc gcc 4:15.2.0-5 install ok installed gcc-14-base:amd64 gcc-14-base 14.3.0-14 install ok installed gcc-15 gcc-15 15.2.0-17 install ok installed gcc-15-base:amd64 gcc-15-base 15.2.0-17 install ok installed gcc-15-x86-64-linux-gnu gcc-15-x86-64-linux-gnu 15.2.0-17 install ok installed gcc-16-base:amd64 gcc-16-base 16.1.0-1 install ok installed gcc-x86-64-linux-gnu gcc-x86-64-linux-gnu 4:15.2.0-5 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.13-1 install ok installed hmmer hmmer 3.4+dfsg-3 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69 install ok installed isa-support:amd64 isa-support 27+b1 install ok installed isympy-common isympy-common 1.14.0-3 install ok installed isympy3 isympy3 1.14.0-3 install ok installed java-common java-common 0.77 install ok installed javascript-common javascript-common 12+nmu1 install ok installed krb5-locales krb5-locales 1.22.1-2.1 install ok installed libabsl20260107:amd64 libabsl20260107 20260107.0-5 install ok installed libacl1:amd64 libacl1 2.3.2-3 install ok installed libada-url0-3:amd64 libada-url0-3 3.4.4-1 install ok installed libalgorithm-diff-perl libalgorithm-diff-perl 1.201-1 install ok installed libalgorithm-diff-xs-perl libalgorithm-diff-xs-perl 0.04-9 install ok installed libalgorithm-merge-perl libalgorithm-merge-perl 0.08-5 install ok installed libaom3:amd64 libaom3 3.13.1-2+b1 install ok installed libapache-pom-java libapache-pom-java 33-2 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.1 install ok installed libasan8:amd64 libasan8 16.1.0-1 install ok installed libasound2-data libasound2-data 1.2.15.3-1 install ok installed libasound2t64:amd64 libasound2t64 1.2.15.3-1+b1 install ok installed libatomic1:amd64 libatomic1 16.1.0-1 install ok installed libattr1:amd64 libattr1 1:2.5.2-4 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b1 install ok installed libavahi-client3:amd64 libavahi-client3 0.8-18 install ok installed libavahi-common-data:amd64 libavahi-common-data 0.8-18 install ok installed libavahi-common3:amd64 libavahi-common3 0.8-18 install ok installed libavif16:amd64 libavif16 1.4.1-1+b1 install ok installed libbinutils:amd64 libbinutils 2.46-3 install ok installed libblas3:amd64 libblas3 3.12.1-7+b2 install ok installed libblkid1:amd64 libblkid1 2.42.1-2 install ok installed libblosc1:amd64 libblosc1 1.21.5+ds-2+b2 install ok installed libblosc2-7:amd64 libblosc2-7 2.23.1+ds-1 install ok installed libbrotli1:amd64 libbrotli1 1.2.0-3 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.42-16 install ok installed libc-dev-bin libc-dev-bin 2.42-16 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.42-16 install ok installed libc6:amd64 libc6 2.42-16 install ok installed libc6-dev:amd64 libc6-dev 2.42-16 install ok installed libcairo2:amd64 libcairo2 1.18.4-3+b1 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.3-1 install ok installed libcap2:amd64 libcap2 1:2.78-1 install ok installed libcares2:amd64 libcares2 1.34.6-1+b1 install ok installed libcc1-0:amd64 libcc1-0 16.1.0-1 install ok installed libcom-err2:amd64 libcom-err2 1.47.4-1 install ok installed libcommons-cli-java libcommons-cli-java 1.6.0-1 install ok installed libcommons-codec-java libcommons-codec-java 1.22.0-1 install ok installed libcommons-io-java libcommons-io-java 2.22.0-1 install ok installed libcommons-parent-java libcommons-parent-java 56-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.1-1+b1 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.46-3 install ok installed libctf0:amd64 libctf0 2.46-3 install ok installed libcups2t64:amd64 libcups2t64 2.4.18-1 install ok installed libcurl4t64:amd64 libcurl4t64 8.20.0-5 install ok installed libdav1d7:amd64 libdav1d7 1.5.3-1+b2 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdbus-1-3:amd64 libdbus-1-3 1.16.2-5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libdeflate0:amd64 libdeflate0 1.25-1 install ok installed libdisplay-info3:amd64 libdisplay-info3 0.3.0-1+b1 install ok installed libdivsufsort3:amd64 libdivsufsort3 2.0.1-7+b1 install ok installed libdpkg-perl libdpkg-perl 1.23.7 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.131-1+b1 install ok installed libdrm-common libdrm-common 2.4.131-1 install ok installed libdrm-intel1:amd64 libdrm-intel1 2.4.131-1+b1 install ok installed libdrm2:amd64 libdrm2 2.4.131-1+b1 install ok installed libedit2:amd64 libedit2 3.1-20260512-1 install ok installed libelf1t64:amd64 libelf1t64 0.195-1 install ok installed libexpat1:amd64 libexpat1 2.8.1-1 install ok installed libexpat1-dev:amd64 libexpat1-dev 2.8.1-1 install ok installed libfakeroot:amd64 libfakeroot 1.38.1-1 install ok installed libffi8:amd64 libffi8 3.5.2-4 install ok installed libfile-fcntllock-perl libfile-fcntllock-perl 0.22-4+b4 install ok installed libfontconfig1:amd64 libfontconfig1 2.17.1-5 install ok installed libfontenc1:amd64 libfontenc1 1:1.1.8-1+b3 install ok installed libfreetype6:amd64 libfreetype6 2.14.3+dfsg-1 install ok installed libfribidi0:amd64 libfribidi0 1.0.16-5+b1 install ok installed libgav1-2:amd64 libgav1-2 0.20.0-2+b1 install ok installed libgbm1:amd64 libgbm1 26.0.6-1 install ok installed libgcc-15-dev:amd64 libgcc-15-dev 15.2.0-17 install ok installed libgcc-s1:amd64 libgcc-s1 16.1.0-1 install ok installed libgcrypt20:amd64 libgcrypt20 1.12.2-1 install ok installed libgdbm-compat4t64:amd64 libgdbm-compat4t64 1.26-1+b2 install ok installed libgdbm6t64:amd64 libgdbm6t64 1.26-1+b2 install ok installed libgfortran5:amd64 libgfortran5 16.1.0-1 install ok installed libgl1:amd64 libgl1 1.7.0-3+b1 install ok installed libgl1-mesa-dri:amd64 libgl1-mesa-dri 26.0.6-1 install ok installed libglib2.0-0t64:amd64 libglib2.0-0t64 2.88.1-2 install ok installed libglib2.0-data libglib2.0-data 2.88.1-2 install ok installed libglvnd0:amd64 libglvnd0 1.7.0-3+b1 install ok installed libglx-mesa0:amd64 libglx-mesa0 26.0.6-1 install ok installed libglx0:amd64 libglx0 1.7.0-3+b1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.13-1 install ok installed libgomp1:amd64 libgomp1 16.1.0-1 install ok installed libgpg-error-l10n libgpg-error-l10n 1.59-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.59-4 install ok installed libgpm2:amd64 libgpm2 1.20.7-12+b2 install ok installed libgprofng0:amd64 libgprofng0 2.46-3 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.15-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.22.1-2.1 install ok installed libharfbuzz-subset0:amd64 libharfbuzz-subset0 12.3.2-2+b2 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 12.3.2-2+b2 install ok installed libhdf5-310:amd64 libhdf5-310 1.14.6+repack-2+b1 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed libhwasan0:amd64 libhwasan0 16.1.0-1 install ok installed libhwloc-plugins:amd64 libhwloc-plugins 2.13.0-2 install ok installed libhwloc15:amd64 libhwloc15 2.13.0-2 install ok installed libicu78:amd64 libicu78 78.3-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.8-5 install ok installed libimagequant0:amd64 libimagequant0 4.4.1-1+b2 install ok installed libisl23:amd64 libisl23 0.27-2 install ok installed libitm1:amd64 libitm1 16.1.0-1 install ok installed libjansson4:amd64 libjansson4 2.14-2+b4 install ok installed libjbig0:amd64 libjbig0 2.1-6.1+b3 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:3.1.3-4 install ok installed libjs-jquery libjs-jquery 3.7.1+dfsg+~3.5.33-1 install ok installed libjs-sphinxdoc libjs-sphinxdoc 9.1.0-4 install ok installed libk5crypto3:amd64 libk5crypto3 1.22.1-2.1 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-6+b2 install ok installed libkrb5-3:amd64 libkrb5-3 1.22.1-2.1 install ok installed libkrb5support0:amd64 libkrb5support0 1.22.1-2.1 install ok installed liblapack3:amd64 liblapack3 3.12.1-7+b2 install ok installed liblastlog2-2:amd64 liblastlog2-2 2.42.1-2 install ok installed liblcms2-2:amd64 liblcms2-2 2.19.1-1 install ok installed libldap-common libldap-common 2.6.10+dfsg-1 install ok installed libldap2:amd64 libldap2 2.6.10+dfsg-1+b2 install ok installed liblerc4:amd64 liblerc4 4.1.0+ds-1 install ok installed libllhttp9.4:amd64 libllhttp9.4 9.4.1+~cs12.11.9-3 install ok installed libllvm21:amd64 libllvm21 1:21.1.8-7+b1 install ok installed liblmdb0:amd64 liblmdb0 0.9.31-1+b3 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.07-10 install ok installed liblog4j1.2-java liblog4j1.2-java 1.2.17-11 install ok installed liblsan0:amd64 liblsan0 16.1.0-1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.3-1 install ok installed liblzo2-2:amd64 liblzo2-2 2.10-3+b2 install ok installed libmbedcrypto16:amd64 libmbedcrypto16 3.6.6-0.1 install ok installed libmbedtls21:amd64 libmbedtls21 3.6.6-0.1 install ok installed libmbedx509-7:amd64 libmbedx509-7 3.6.6-0.1 install ok installed libmd0:amd64 libmd0 1.2.0-2 install ok installed libmount1:amd64 libmount1 2.42.1-2 install ok installed libmpc3:amd64 libmpc3 1.3.1-3 install ok installed libmpfr6:amd64 libmpfr6 4.2.2-3 install ok installed libmpj-java libmpj-java 0.44+dfsg-4 install ok installed libncbi-vdb3:amd64 libncbi-vdb3 3.2.1+dfsg-2+b1 install ok installed libncursesw6:amd64 libncursesw6 6.6+20251231-1+b1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.69.0-1 install ok installed libnghttp3-9:amd64 libnghttp3-9 1.15.0-1 install ok installed libngtcp2-16:amd64 libngtcp2-16 1.22.1-1 install ok installed libngtcp2-crypto-ossl0:amd64 libngtcp2-crypto-ossl0 1.22.1-1 install ok installed libnode137:amd64 libnode137 24.15.0+dfsg+~cs24.12.2-1+b1 install ok installed libnspr4:amd64 libnspr4 2:4.38.2-1+b1 install ok installed libnss3:amd64 libnss3 2:3.124-1 install ok installed libopenjp2-7:amd64 libopenjp2-7 2.5.4-1.1 install ok installed libp11-kit0:amd64 libp11-kit0 0.26.2-2 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-5+b2 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-5+b2 install ok installed libpam-runtime libpam-runtime 1.7.0-5 install ok installed libpam0g:amd64 libpam0g 1.7.0-5+b2 install ok installed libpciaccess0:amd64 libpciaccess0 0.17-3+b4 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.46-1+b2 install ok installed libpcsclite1:amd64 libpcsclite1 2.5.0-1 install ok installed libperl5.40:amd64 libperl5.40 5.40.1-7+b1 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.46.4-1+b2 install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.58-1 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.5-1 install ok installed libpython3-dev:amd64 libpython3-dev 3.13.9-3+b1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.13.9-3+b1 install ok installed libpython3.13:amd64 libpython3.13 3.13.12-1 install ok installed libpython3.13-dev:amd64 libpython3.13-dev 3.13.12-1 install ok installed libpython3.13-minimal:amd64 libpython3.13-minimal 3.13.12-1 install ok installed libpython3.13-stdlib:amd64 libpython3.13-stdlib 3.13.12-1 install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-9 install ok installed libquadmath0:amd64 libquadmath0 16.1.0-1 install ok installed libraqm0:amd64 libraqm0 0.10.5-1 install ok installed librav1e0.8:amd64 librav1e0.8 0.8.1-10 install ok installed libreadline8t64:amd64 libreadline8t64 8.3-4 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-11 install ok installed libsasl2-modules:amd64 libsasl2-modules 2.1.28+dfsg1-11 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-11 install ok installed libseccomp2:amd64 libseccomp2 2.6.0-2+b1 install ok installed libselinux1:amd64 libselinux1 3.10-1 install ok installed libsemanage-common libsemanage-common 3.10-1 install ok installed libsemanage2:amd64 libsemanage2 3.10-1 install ok installed libsensors-config libsensors-config 1:3.6.2-2 install ok installed libsensors5:amd64 libsensors5 1:3.6.2-2+b2 install ok installed libsepol2:amd64 libsepol2 3.10-1 install ok installed libsframe3:amd64 libsframe3 2.46-3 install ok installed libsharpyuv0:amd64 libsharpyuv0 1.5.0-0.1+b2 install ok installed libsimdjson33:amd64 libsimdjson33 4.6.4-1 install ok installed libsimdutf33:amd64 libsimdutf33 8.2.0-1 install ok installed libskia146:amd64 libskia146 146.20260414~git.ef5f213+dfsg-5 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.1-2 install ok installed libsnappy1v5:amd64 libsnappy1v5 1.2.2-2+b2 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-9+b1 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.1-3 install ok installed libssl3t64:amd64 libssl3t64 3.6.2-1 install ok installed libstdc++-15-dev:amd64 libstdc++-15-dev 15.2.0-17 install ok installed libstdc++6:amd64 libstdc++6 16.1.0-1 install ok installed libsvtav1enc4:amd64 libsvtav1enc4 4.1.0+dfsg-1 install ok installed libsystemd0:amd64 libsystemd0 260.1-1 install ok installed libsz2:amd64 libsz2 1.1.7-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.21.0-2+b1 install ok installed libtbb12:amd64 libtbb12 2022.3.0-2 install ok installed libtbbbind-2-5:amd64 libtbbbind-2-5 2022.3.0-2 install ok installed libtbbmalloc2:amd64 libtbbmalloc2 2022.3.0-2 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.18+dfsg-1 install ok installed libtiff6:amd64 libtiff6 4.7.1-2 install ok installed libtinfo6:amd64 libtinfo6 6.6+20251231-1+b1 install ok installed libtk8.6:amd64 libtk8.6 8.6.18-1 install ok installed libtsan2:amd64 libtsan2 16.1.0-1 install ok installed libubsan1:amd64 libubsan1 16.1.0-1 install ok installed libudev1:amd64 libudev1 260.1-1 install ok installed libunistring5:amd64 libunistring5 1.4.2-1 install ok installed libuuid1:amd64 libuuid1 2.42.1-2 install ok installed libuv1t64:amd64 libuv1t64 1.52.1-4 install ok installed libvulkan1:amd64 libvulkan1 1.4.341.0-1 install ok installed libwayland-client0:amd64 libwayland-client0 1.24.0-2+b2 install ok installed libwebp7:amd64 libwebp7 1.5.0-0.1+b2 install ok installed libwebpdemux2:amd64 libwebpdemux2 1.5.0-0.1+b2 install ok installed libwebpmux3:amd64 libwebpmux3 1.5.0-0.1+b2 install ok installed libx11-6:amd64 libx11-6 2:1.8.13-1 install ok installed libx11-data libx11-data 2:1.8.13-1 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.8.13-1 install ok installed libxau6:amd64 libxau6 1:1.0.11-1+b2 install ok installed libxcb-dri3-0:amd64 libxcb-dri3-0 1.17.0-2+b2 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.17.0-2+b2 install ok installed libxcb-present0:amd64 libxcb-present0 1.17.0-2+b2 install ok installed libxcb-randr0:amd64 libxcb-randr0 1.17.0-2+b2 install ok installed libxcb-render0:amd64 libxcb-render0 1.17.0-2+b2 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.17.0-2+b2 install ok installed libxcb-sync1:amd64 libxcb-sync1 1.17.0-2+b2 install ok installed libxcb-xfixes0:amd64 libxcb-xfixes0 1.17.0-2+b2 install ok installed libxcb1:amd64 libxcb1 1.17.0-2+b2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.5-2+b1 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b4 install ok installed libxft2:amd64 libxft2 2.3.6-1+b5 install ok installed libxml2-16:amd64 libxml2-16 2.15.2+dfsg-0.1 install ok installed libxnvctrl0:amd64 libxnvctrl0 535.171.04-1+b3 install ok installed libxrender1:amd64 libxrender1 1:0.9.12-1+b2 install ok installed libxshmfence1:amd64 libxshmfence1 1.3.3-1+b2 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.45-0.1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1+b4 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.4-2+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libyaml-0-2:amd64 libyaml-0-2 0.2.5-2+b1 install ok installed libyuv0:amd64 libyuv0 0.0.1922.20260106-1+b1 install ok installed libz3-4:amd64 libz3-4 4.13.3-1.1 install ok installed libze1:amd64 libze1 1.28.2-2 install ok installed libzopfli1 libzopfli1 1.0.3-3 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-3+b2 install ok installed linux-libc-dev linux-libc-dev 7.0.10-1 install ok installed login login 1:4.16.0-2+really2.42.1-2 install ok installed login.defs login.defs 1:4.19.3-2 install ok installed make make 4.4.1-3 install ok installed manpages manpages 6.18-1 install ok installed manpages-dev manpages-dev 6.18-1 install ok installed mawk mawk 1.3.4.20260302-1 install ok installed media-types media-types 14.0.0 install ok installed mesa-libgallium:amd64 mesa-libgallium 26.0.6-1 install ok installed mesa-vulkan-drivers:amd64 mesa-vulkan-drivers 26.0.6-1 install ok installed mount mount 2.42.1-2 install ok installed ncbi-blast+ ncbi-blast+ 2.17.0+ds-7 install ok installed ncbi-data ncbi-data 6.1.20170106+dfsg2-7 install ok installed ncbi-vdb-data ncbi-vdb-data 3.2.1+dfsg-2 install ok installed ncurses-base ncurses-base 6.6+20251231-1 install ok installed ncurses-bin ncurses-bin 6.6+20251231-1+b1 install ok installed netbase netbase 6.5 install ok installed node-acorn node-acorn 8.16.0+ds+~cs25.18.7-4 install ok installed node-balanced-match node-balanced-match 2.0.0-1 install ok installed node-brace-expansion node-brace-expansion 2.0.3+~1.1.2-2 install ok installed node-commander node-commander 14.0.3-7 install ok installed node-corepack node-corepack 0.24.0-5 install ok installed node-debug node-debug 4.4.3+~4.1.13-1 install ok installed node-llhttp node-llhttp 9.4.1+~cs12.11.9-3 install ok installed node-lru-cache node-lru-cache 11.2.7-6 install ok installed node-mathjax-full node-mathjax-full 3.2.2+~cs4.2.1-5 install ok installed node-minimatch node-minimatch 9.0.7-1 install ok installed node-mj-context-menu node-mj-context-menu 0.9.1+ds-2 install ok installed node-ms node-ms 2.1.3+~cs0.7.31-3 install ok installed node-semver node-semver 7.7.4+~cs9.7.4-1 install ok installed node-speech-rule-engine node-speech-rule-engine 4.1.4+~0.1.31-1 install ok installed node-undici node-undici 7.24.6+dfsg+~cs3.2.0-3 install ok installed node-xmldom node-xmldom 0.9.9-1 install ok installed node-xtend node-xtend 4.0.2-3 install ok installed nodejs nodejs 24.15.0+dfsg+~cs24.12.2-1+b1 install ok installed nodejs-doc nodejs-doc 24.15.0+dfsg+~cs24.12.2-1 install ok installed numba-doc numba-doc 0.65.1+dfsg-3 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.3.4-1+b1 install ok installed openjdk-25-jre-headless:amd64 openjdk-25-jre-headless 25.0.3+9-2 install ok installed openssl openssl 3.6.2-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.2-1 install ok installed passwd passwd 1:4.19.3-2 install ok installed patch patch 2.8-2 install ok installed perl perl 5.40.1-7+b1 install ok installed perl-base perl-base 5.40.1-7+b1 install ok installed perl-modules-5.40 perl-modules-5.40 5.40.1-7 install ok installed pigz pigz 2.8-2 install ok installed prodigal prodigal 1:2.6.3-6 install ok installed publicsuffix publicsuffix 20260428.1050-1 install ok installed python-babel-localedata python-babel-localedata 2.17.0-2 install ok installed python-biopython-doc python-biopython-doc 1.87+dfsg-1 install ok installed python-matplotlib-data python-matplotlib-data 3.10.7+dfsg1-5 install ok installed python-odf-doc python-odf-doc 1.4.2-4 install ok installed python-odf-tools python-odf-tools 1.4.2-4 install ok installed python-tables-data python-tables-data 3.11.1-1 install ok installed python3 python3 3.13.9-3+b1 install ok installed python3-attr python3-attr 26.1.0-1 install ok installed python3-babel python3-babel 2.17.0-2 install ok installed python3-biopython python3-biopython 1.87+dfsg-1 install ok installed python3-bottleneck python3-bottleneck 1.4.2+ds1-2+b2 install ok installed python3-brotli python3-brotli 1.2.0-3 install ok installed python3-bs4 python3-bs4 4.14.3-2 install ok installed python3-cairo python3-cairo 1.27.0-2+b1 install ok installed python3-certifi python3-certifi 2026.5.20+ds-1 install ok installed python3-chardet python3-chardet 5.2.0+dfsg-2 install ok installed python3-charset-normalizer python3-charset-normalizer 3.4.7-1 install ok installed python3-contourpy python3-contourpy 1.3.3-1+b1 install ok installed python3-cpuinfo python3-cpuinfo 9.0.0+git20221119-3 install ok installed python3-cssselect python3-cssselect 1.4.0-1 install ok installed python3-cycler python3-cycler 0.12.1-2 install ok installed python3-dateutil python3-dateutil 2.9.0-4 install ok installed python3-decorator python3-decorator 5.2.1-2 install ok installed python3-defusedxml python3-defusedxml 0.7.1-3 install ok installed python3-dev python3-dev 3.13.9-3+b1 install ok installed python3-et-xmlfile python3-et-xmlfile 2.0.0-2 install ok installed python3-fonttools python3-fonttools 4.62.1-7 install ok installed python3-freetype python3-freetype 2.5.1-2 install ok installed python3-html5lib python3-html5lib 1.2-3 install ok installed python3-idna python3-idna 3.11-1 install ok installed python3-jinja2 python3-jinja2 3.1.6-2 install ok installed python3-kiwisolver python3-kiwisolver 1.5.0-1 install ok installed python3-legacy-cgi python3-legacy-cgi 2.6.4-2 install ok installed python3-llvmlite python3-llvmlite 0.47.0-0.1 install ok installed python3-lxml:amd64 python3-lxml 6.1.0-1 install ok installed python3-lz4 python3-lz4 4.4.5+dfsg-1 install ok installed python3-markupsafe python3-markupsafe 3.0.3-1+b1 install ok installed python3-matplotlib python3-matplotlib 3.10.7+dfsg1-5 install ok installed python3-minimal python3-minimal 3.13.9-3+b1 install ok installed python3-mpmath python3-mpmath 1.4.1-2 install ok installed python3-numba python3-numba 0.65.1+dfsg-3 install ok installed python3-numexpr python3-numexpr 2.14.1-1+b1 install ok installed python3-numpy python3-numpy 1:2.3.5+ds-3+b1 install ok installed python3-numpy-dev:amd64 python3-numpy-dev 1:2.3.5+ds-3+b1 install ok installed python3-odf python3-odf 1.4.2-4 install ok installed python3-olefile python3-olefile 0.47-1 install ok installed python3-openpyxl python3-openpyxl 3.1.5+dfsg-4 install ok installed python3-packaging python3-packaging 26.0-1 install ok installed python3-pandas python3-pandas 2.3.3+dfsg-3 install ok installed python3-pandas-lib:amd64 python3-pandas-lib 2.3.3+dfsg-3+b1 install ok installed python3-pil:amd64 python3-pil 12.2.0-1 install ok installed python3-pil.imagetk:amd64 python3-pil.imagetk 12.2.0-1 install ok installed python3-pip python3-pip 26.1.1+dfsg-1 install ok installed python3-platformdirs python3-platformdirs 4.10.0-1 install ok installed python3-pooch python3-pooch 1.9.0-1 install ok installed python3-pyparsing python3-pyparsing 3.3.2-2 install ok installed python3-pytz python3-pytz 2025.2-6 install ok installed python3-reportlab python3-reportlab 4.4.10-1 install ok installed python3-requests python3-requests 2.32.5+dfsg-1 install ok installed python3-rlpycairo python3-rlpycairo 0.3.0-4 install ok installed python3-scipy python3-scipy 1.16.3-4 install ok installed python3-skia-pathops python3-skia-pathops 0.9.2-2 install ok installed python3-soupsieve python3-soupsieve 2.8.4-1 install ok installed python3-sympy python3-sympy 1.14.0-3 install ok installed python3-tables python3-tables 3.11.1-1 install ok installed python3-tables-lib python3-tables-lib 3.11.1-1 install ok installed python3-tk python3-tk 3.13.9-3+b1 install ok installed python3-tqdm python3-tqdm 4.67.3-1 install ok installed python3-typing-extensions python3-typing-extensions 4.15.0-2 install ok installed python3-ufolib2 python3-ufolib2 0.18.1+dfsg1-1 install ok installed python3-uharfbuzz python3-uharfbuzz 0.53.3-1+b1 install ok installed python3-unicodedata2 python3-unicodedata2 17.0.1+ds-1 install ok installed python3-urllib3 python3-urllib3 2.6.3-2 install ok installed python3-webencodings python3-webencodings 0.5.1-5 install ok installed python3-wheel python3-wheel 0.47.0-1 install ok installed python3-yaml python3-yaml 6.0.3-1 install ok installed python3-zopfli python3-zopfli 0.4.2-1 install ok installed python3.13 python3.13 3.13.12-1 install ok installed python3.13-dev python3.13-dev 3.13.12-1 install ok installed python3.13-minimal python3.13-minimal 3.13.12-1 install ok installed python3.13-tk python3.13-tk 3.13.12-1 install ok installed python3.14-tk python3.14-tk 3.14.5-1 install ok installed readline-common readline-common 8.3-4 install ok installed rpcsvc-proto rpcsvc-proto 1.4.4-1 install ok installed sed sed 4.9-3 install ok installed sgml-base sgml-base 1.31+nmu1 install ok installed shared-mime-info shared-mime-info 2.4-5+b3 install ok installed sphinx-rtd-theme-common sphinx-rtd-theme-common 3.1.0+dfsg-1 install ok installed sq sq 1.3.1-9+b1 install ok installed sqv sqv 1.3.0-5+b2 install ok installed sse4.2-support sse4.2-support 27+b1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-4 install ok installed tzdata tzdata 2026b-1 install ok installed unicode-data unicode-data 17.0.0-2 install ok installed util-linux util-linux 2.42.1-2 install ok installed util-linux-extra util-linux-extra 2.42.1-2 install ok installed w3c-sgml-lib w3c-sgml-lib 1.3-3 install ok installed x11-common x11-common 1:7.7+26 install ok installed xdg-user-dirs xdg-user-dirs 0.20-1 install ok installed xfonts-encodings xfonts-encodings 1:1.0.4-2.2 install ok installed xfonts-utils xfonts-utils 1:7.7+7 install ok installed xml-core xml-core 0.20 install ok installed xz-utils xz-utils 5.8.3-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.3.dfsg+really1.3.2-3 2m50.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 2m50.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', 'remove', '--allow-remove-essential', 'alsa-topology-conf', 'alsa-ucm-conf', 'bbmap', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'build-essential', 'bzip2', 'ca-certificates', 'ca-certificates-java', 'cpp', 'cpp-15', 'cpp-15-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'default-jre-headless', 'dpkg-dev', 'fakeroot', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-font-awesome', 'fonts-lato', 'fonts-lyx', 'fonts-urw-base35', 'g++-', 'g++-15', 'g++-15-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-15', 'gcc-15-base:amd64', 'gcc-15-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'hmmer', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'javascript-common', 'krb5-locales', 'libabsl20260107:amd64', 'libada-url0-3:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl', 'libalgorithm-merge-perl', 'libaom3:amd64', 'libapache-pom-java', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libatomic1:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libblosc2-7:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcares2:amd64', 'libcc1-0:amd64', 'libcom-err2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-io-java', 'libcommons-parent-java', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl4t64:amd64', 'libdav1d7:amd64', 'libdbus-1-3:amd64', 'libdeflate0:amd64', 'libdisplay-info3:amd64', 'libdivsufsort3:amd64', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libfakeroot:amd64', 'libffi8:amd64', 'libfile-fcntllock-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgav1-2:amd64', 'libgbm1:amd64', 'libgcc-15-dev:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error-l10n', 'libgpg-error0:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz-subset0:amd64', 'libharfbuzz0b:amd64', 'libhdf5-310:amd64', 'libhwasan0:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-common', 'libldap2:amd64', 'liblerc4:amd64', 'libllhttp9.4:amd64', 'libllvm21:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblog4j1.2-java', 'liblsan0:amd64', 'liblzo2-2:amd64', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libmpj-java', 'libncbi-vdb3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libnode137:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libopenjp2-7:amd64', 'libp11-kit0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.40:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'librav1e0.8:amd64', 'libreadline8t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsframe3:amd64', 'libsharpyuv0:amd64', 'libsimdjson33:amd64', 'libsimdutf33:amd64', 'libskia146:amd64', 'libsnappy1v5:amd64', 'libssh2-1t64:amd64', 'libstdc++-15-dev:amd64', 'libsvtav1enc4:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2-16:amd64', 'libxnvctrl0:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyuv0:amd64', 'libz3-4:amd64', 'libze1:amd64', 'libzopfli1', 'linux-libc-dev', 'make', 'manpages', 'manpages-dev', 'media-types', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'ncbi-blast+-', 'ncbi-data', 'ncbi-vdb-data', 'netbase', 'node-acorn', 'node-balanced-match', 'node-brace-expansion', 'node-commander', 'node-corepack', 'node-debug', 'node-llhttp', 'node-lru-cache', 'node-mathjax-full', 'node-minimatch', 'node-mj-context-menu', 'node-ms', 'node-semver', 'node-speech-rule-engine', 'node-undici', 'node-xmldom', 'node-xtend', 'nodejs', 'nodejs-doc', 'numba-doc', 'ocl-icd-libopencl1:amd64', 'openjdk-25-jre-headless:amd64', 'openssl', 'patch', 'perl', 'perl-modules-5.40', 'pigz', 'prodigal', 'publicsuffix', 'python-babel-localedata', 'python-biopython-doc', 'python-matplotlib-data', 'python-odf-doc', 'python-odf-tools', 'python-tables-data', 'python3', 'python3-attr', 'python3-babel', 'python3-biopython', 'python3-bottleneck', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cpuinfo', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-defusedxml', 'python3-dev', 'python3-et-xmlfile', 'python3-fonttools', 'python3-freetype', 'python3-html5lib', 'python3-idna', 'python3-jinja2', 'python3-kiwisolver', 'python3-legacy-cgi', 'python3-llvmlite', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-numba', 'python3-numexpr', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-odf', 'python3-olefile', 'python3-openpyxl', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pip', 'python3-platformdirs', 'python3-pooch', 'python3-pyparsing', 'python3-pytz', 'python3-reportlab', 'python3-requests', 'python3-rlpycairo', 'python3-scipy', 'python3-skia-pathops', 'python3-soupsieve', 'python3-sympy', 'python3-tables', 'python3-tables-lib', 'python3-tk', 'python3-tqdm', 'python3-typing-extensions', 'python3-ufolib2', 'python3-uharfbuzz', 'python3-unicodedata2', 'python3-urllib3', 'python3-webencodings', 'python3-wheel', 'python3-yaml', 'python3-zopfli', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'python3.13-tk', 'python3.14-tk', 'readline-common', 'rpcsvc-proto', 'sgml-base', 'shared-mime-info', 'sphinx-rtd-theme-common', 'sq', 'sse4.2-support', 'unicode-data', 'w3c-sgml-lib', 'x11-common', 'xdg-user-dirs', 'xfonts-encodings', 'xfonts-utils', 'xml-core', 'xz-utils', 'zlib1g-dev:amd64', 'busco'] 3m30.6s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: alsa-topology-conf alsa-ucm-conf bbmap binutils binutils-common binutils-x86-64-linux-gnu build-essential busco bzip2 ca-certificates ca-certificates-java cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu default-jre-headless dpkg-dev fakeroot fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-font-awesome fonts-lato fonts-lyx fonts-urw-base35 g++ g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15 gcc-15-base gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu hmmer isa-support isympy-common isympy3 java-common javascript-common krb5-locales libabsl20260107 libada-url0-3 libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libaom3 libapache-pom-java libasan8 libasound2-data libasound2t64 libatomic1 libavahi-client3 libavahi-common-data libavahi-common3 libavif16 libbinutils libblas3 libblosc1 libblosc2-7 libbrotli1 libc-dev-bin libc6-dev libcairo2 libcares2 libcc1-0 libcom-err2 libcommons-cli-java libcommons-codec-java libcommons-io-java libcommons-parent-java libctf-nobfd0 libctf0 libcups2t64 libcurl4t64 libdav1d7 libdbus-1-3 libdeflate0 libdisplay-info3 libdivsufsort3 libdpkg-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm2 libedit2 libelf1t64 libexpat1 libexpat1-dev libfakeroot libffi8 libfile-fcntllock-perl libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgav1-2 libgbm1 libgcc-15-dev libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgfortran5 libgl1 libgl1-mesa-dri libglib2.0-0t64 libglib2.0-data libglvnd0 libglx-mesa0 libglx0 libgnutls30t64 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz-subset0 libharfbuzz0b libhdf5-310 libhwasan0 libhwloc-plugins libhwloc15 libicu78 libidn2-0 libimagequant0 libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-common libldap2 liblerc4 libllhttp9.4 libllvm21 liblmdb0 liblocale-gettext-perl liblog4j1.2-java liblsan0 liblzo2-2 libmbedcrypto16 libmbedtls21 libmbedx509-7 libmpc3 libmpfr6 libmpj-java libncbi-vdb3 libncursesw6 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libnode137 libnspr4 libnss3 libopenjp2-7 libp11-kit0 libpciaccess0 libpcsclite1 libperl5.40 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3-dev libpython3-stdlib libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libquadmath0 libraqm0 librav1e0.8 libreadline8t64 libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libsframe3 libsharpyuv0 libsimdjson33 libsimdutf33 libskia146 libsnappy1v5 libssh2-1t64 libstdc++-15-dev libsvtav1enc4 libsz2 libtasn1-6 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtiff6 libtk8.6 libtsan2 libubsan1 libunistring5 libuv1t64 libvulkan1 libwayland-client0 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2-16 libxnvctrl0 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxxf86vm1 libyaml-0-2 libyuv0 libz3-4 libze1 libzopfli1 linux-libc-dev make manpages manpages-dev media-types mesa-libgallium mesa-vulkan-drivers ncbi-blast+ ncbi-data ncbi-vdb-data netbase node-acorn node-balanced-match node-brace-expansion node-commander node-corepack node-debug node-llhttp node-lru-cache node-mathjax-full node-minimatch node-mj-context-menu node-ms node-semver node-speech-rule-engine node-undici node-xmldom node-xtend nodejs nodejs-doc numba-doc ocl-icd-libopencl1 openjdk-25-jre-headless openssl patch perl perl-modules-5.40 pigz prodigal publicsuffix python-babel-localedata python-biopython-doc python-matplotlib-data python-odf-doc python-odf-tools python-tables-data python3 python3-attr python3-babel python3-biopython python3-bottleneck python3-brotli python3-bs4 python3-cairo python3-certifi python3-chardet python3-charset-normalizer python3-contourpy python3-cpuinfo python3-cssselect python3-cycler python3-dateutil python3-decorator python3-defusedxml python3-dev python3-et-xmlfile python3-fonttools python3-freetype python3-html5lib python3-idna python3-jinja2 python3-kiwisolver python3-legacy-cgi python3-llvmlite python3-lxml python3-lz4 python3-markupsafe python3-matplotlib python3-minimal python3-mpmath python3-numba python3-numexpr python3-numpy python3-numpy-dev python3-odf python3-olefile python3-openpyxl python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pip python3-platformdirs python3-pooch python3-pyparsing python3-pytz python3-reportlab python3-requests python3-rlpycairo python3-scipy python3-skia-pathops python3-soupsieve python3-sympy python3-tables python3-tables-lib python3-tk python3-tqdm python3-typing-extensions python3-ufolib2 python3-uharfbuzz python3-unicodedata2 python3-urllib3 python3-webencodings python3-wheel python3-yaml python3-zopfli python3.13 python3.13-dev python3.13-minimal python3.13-tk python3.14-tk readline-common rpcsvc-proto sgml-base shared-mime-info sphinx-rtd-theme-common sq sse4.2-support unicode-data w3c-sgml-lib x11-common xdg-user-dirs xfonts-encodings xfonts-utils xml-core xz-utils zlib1g-dev 0 upgraded, 0 newly installed, 382 to remove and 0 not upgraded. After this operation, 2221 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49545 files and directories currently installed.) Removing alsa-topology-conf (1.2.5.1-3) ... Removing alsa-ucm-conf (1.2.15.3-1) ... Removing busco (6.0.0-1) ... Removing bbmap (39.20+dfsg-3) ... Removing build-essential (12.12) ... Removing g++ (4:15.2.0-5) ... Removing gcc (4:15.2.0-5) ... Removing dpkg-dev (1.23.7) ... Removing g++-x86-64-linux-gnu (4:15.2.0-5) ... Removing gcc-x86-64-linux-gnu (4:15.2.0-5) ... Removing bzip2 (1.0.8-6+b2) ... Removing default-jre-headless (2:1.25-77) ... Removing openjdk-25-jre-headless:amd64 (25.0.3+9-2) ... Removing ca-certificates-java (20260311) ... Removing python3-pooch (1.9.0-1) ... Removing python3-requests (2.32.5+dfsg-1) ... Removing cpp (4:15.2.0-5) ... Removing cpp-x86-64-linux-gnu (4:15.2.0-5) ... Removing fakeroot (1.38.1-1) ... update-alternatives: using /usr/bin/fakeroot-tcp to provide /usr/bin/fakeroot (fakeroot) in auto mode Removing python3-biopython (1.87+dfsg-1) ... Removing python3-reportlab (4.4.10-1) ... Removing python3-matplotlib (3.10.7+dfsg1-5) ... Removing python3-pil.imagetk:amd64 (12.2.0-1) ... Removing python3-pil:amd64 (12.2.0-1) ... Removing python3-tk (3.13.9-3+b1) ... Removing python3.14-tk (3.14.5-1) ... Removing python3.13-tk (3.13.12-1) ... Removing libtk8.6:amd64 (8.6.18-1) ... Removing libxft2:amd64 (2.3.6-1+b5) ... Removing python3-skia-pathops (0.9.2-2) ... Removing libskia146:amd64 (146.20260414~git.ef5f213+dfsg-5) ... Removing python-matplotlib-data (3.10.7+dfsg1-5) ... Removing fonts-dejavu-extra (2.37-9) ... Removing fonts-dejavu-core (2.37-9) ... Removing fonts-dejavu-mono (2.37-9) ... Removing numba-doc (0.65.1+dfsg-3) ... Removing sphinx-rtd-theme-common (3.1.0+dfsg-1) ... Removing fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Removing fonts-lato (2.015-1) ... Removing fonts-lyx (2.5.1-1) ... Removing g++-15 (15.2.0-17) ... Removing g++-15-x86-64-linux-gnu (15.2.0-17) ... Removing libstdc++-15-dev:amd64 (15.2.0-17) ... Removing hmmer (3.4+dfsg-3) ... Removing ncbi-blast+ (2.17.0+ds-7) ... Removing sse4.2-support (27+b1) ... Removing isa-support:amd64 (27+b1) ... Removing isympy3 (1.14.0-3) ... Removing isympy-common (1.14.0-3) ... Removing java-common (0.77) ... Removing javascript-common (12+nmu1) ... Removing krb5-locales (1.22.1-2.1) ... Removing libavif16:amd64 (1.4.1-1+b1) ... Removing libgav1-2:amd64 (0.20.0-2+b1) ... Removing libabsl20260107:amd64 (20260107.0-5) ... Removing python-biopython-doc (1.87+dfsg-1) ... Removing node-mathjax-full (3.2.2+~cs4.2.1-5) ... Removing node-speech-rule-engine (4.1.4+~0.1.31-1) ... Removing libalgorithm-merge-perl (0.08-5) ... Removing libalgorithm-diff-xs-perl (0.04-9) ... Removing libalgorithm-diff-perl (1.201-1) ... Removing libaom3:amd64 (3.13.1-2+b1) ... Removing libmpj-java (0.44+dfsg-4) ... Removing libcommons-codec-java (1.22.0-1) ... Removing libcommons-io-java (2.22.0-1) ... Removing libcommons-parent-java (56-1) ... Removing libapache-pom-java (33-2) ... Removing libasound2t64:amd64 (1.2.15.3-1+b1) ... Removing libasound2-data (1.2.15.3-1) ... Removing shared-mime-info (2.4-5+b3) ... Removing libcups2t64:amd64 (2.4.18-1) ... Removing libavahi-client3:amd64 (0.8-18) ... Removing libavahi-common3:amd64 (0.8-18) ... Removing libavahi-common-data:amd64 (0.8-18) ... Removing python3-numba (0.65.1+dfsg-3) ... Removing python3-tables (3.11.1-1) ... Removing python3-tables-lib (3.11.1-1) ... Removing python3-pandas (2.3.3+dfsg-3) ... Removing python3-pandas-lib:amd64 (2.3.3+dfsg-3+b1) ... Removing libblosc1:amd64 (1.21.5+ds-2+b2) ... Removing libblosc2-7:amd64 (2.23.1+ds-1) ... Removing libraqm0:amd64 (0.10.5-1) ... Removing libhdf5-310:amd64 (1.14.6+repack-2+b1) ... Removing libcurl4t64:amd64 (8.20.0-5) ... Removing python3-dev (3.13.9-3+b1) ... Removing python3.13-dev (3.13.12-1) ... Removing libpython3-dev:amd64 (3.13.9-3+b1) ... Removing libpython3.13-dev:amd64 (3.13.12-1) ... Removing zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Removing libexpat1-dev:amd64 (2.8.1-1) ... Removing libc6-dev:amd64 (2.42-16) ... Removing libc-dev-bin (2.42-16) ... Removing python3-rlpycairo (0.3.0-4) ... Removing python3-cairo (1.27.0-2+b1) ... Removing libcairo2:amd64 (1.18.4-3+b1) ... Removing libgssapi-krb5-2:amd64 (1.22.1-2.1) ... Removing libkrb5-3:amd64 (1.22.1-2.1) ... Removing libcom-err2:amd64 (1.47.4-1) ... Removing libcommons-cli-java (1.6.0-1) ... Removing libdav1d7:amd64 (1.5.3-1+b2) ... Removing libdbus-1-3:amd64 (1.16.2-5) ... Removing libtiff6:amd64 (4.7.1-2) ... Removing libdeflate0:amd64 (1.25-1) ... Removing mesa-vulkan-drivers:amd64 (26.0.6-1) ... Removing libdisplay-info3:amd64 (0.3.0-1+b1) ... Removing libdivsufsort3:amd64 (2.0.1-7+b1) ... Removing libdpkg-perl (1.23.7) ... Removing libgl1:amd64 (1.7.0-3+b1) ... Removing libglx0:amd64 (1.7.0-3+b1) ... Removing libglx-mesa0:amd64 (26.0.6-1) ... Removing libgl1-mesa-dri:amd64 (26.0.6-1) ... Removing libgbm1:amd64 (26.0.6-1) ... Removing mesa-libgallium:amd64 (26.0.6-1) ... Removing libdrm-amdgpu1:amd64 (2.4.131-1+b1) ... Removing libdrm-intel1:amd64 (2.4.131-1+b1) ... Removing libdrm2:amd64 (2.4.131-1+b1) ... Removing libdrm-common (2.4.131-1) ... Removing libllvm21:amd64 (1:21.1.8-7+b1) ... Removing libedit2:amd64 (3.1-20260512-1) ... Removing libelf1t64:amd64 (0.195-1) ... Removing python3-pip (26.1.1+dfsg-1) ... Removing python3-wheel (0.47.0-1) ... Removing python3-yaml (6.0.3-1) ... Removing python3-tqdm (4.67.3-1) ... Removing libpython3.13:amd64 (3.13.12-1) ... Removing libfakeroot:amd64 (1.38.1-1) ... Removing libwayland-client0:amd64 (1.24.0-2+b2) ... Removing libfile-fcntllock-perl (0.22-4+b4) ... Removing libfribidi0:amd64 (1.0.16-5+b1) ... Removing python3-openpyxl (3.1.5+dfsg-4) ... Removing perl (5.40.1-7+b1) ... Removing libperl5.40:amd64 (5.40.1-7+b1) ... Removing libgdbm-compat4t64:amd64 (1.26-1+b2) ... Removing libgdbm6t64:amd64 (1.26-1+b2) ... Removing libglib2.0-data (2.88.1-2) ... Removing libglvnd0:amd64 (1.7.0-3+b1) ... Removing libgnutls30t64:amd64 (3.8.13-1) ... Removing libgpg-error-l10n (1.59-4) ... Removing libgpm2:amd64 (1.20.7-12+b2) ... Removing libhwloc-plugins:amd64 (2.13.0-2) ... Removing libtbb12:amd64 (2022.3.0-2) ... Removing libtbbbind-2-5:amd64 (2022.3.0-2) ... Removing libhwloc15:amd64 (2.13.0-2) ... Removing libpsl5t64:amd64 (0.21.5-1) ... Removing libidn2-0:amd64 (2.3.8-5) ... Removing libimagequant0:amd64 (4.4.1-1+b2) ... Removing libjbig0:amd64 (2.1-6.1+b3) ... Removing libyuv0:amd64 (0.0.1922.20260106-1+b1) ... Removing libjpeg62-turbo:amd64 (1:3.1.3-4) ... Removing python-odf-doc (1.4.2-4) ... Removing libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... Removing libjs-sphinxdoc (9.1.0-4) ... Removing libk5crypto3:amd64 (1.22.1-2.1) ... Removing libkeyutils1:amd64 (1.6.3-6+b2) ... Removing libkrb5support0:amd64 (1.22.1-2.1) ... Removing liblcms2-2:amd64 (2.19.1-1) ... Removing libldap-common (2.6.10+dfsg-1) ... Removing libldap2:amd64 (2.6.10+dfsg-1+b2) ... Removing liblerc4:amd64 (4.1.0+ds-1) ... Removing liblmdb0:amd64 (0.9.31-1+b3) ... Removing liblocale-gettext-perl (1.07-10) ... Removing liblog4j1.2-java (1.2.17-11) ... Removing liblzo2-2:amd64 (2.10-3+b2) ... Removing libncbi-vdb3:amd64 (3.2.1+dfsg-2+b1) ... Removing libmbedtls21:amd64 (3.6.6-0.1) ... Removing libmbedx509-7:amd64 (3.6.6-0.1) ... Removing libmbedcrypto16:amd64 (3.6.6-0.1) ... Removing libnghttp3-9:amd64 (1.15.0-1) ... Removing libngtcp2-crypto-ossl0:amd64 (1.22.1-1) ... Removing libngtcp2-16:amd64 (1.22.1-1) ... Removing libnss3:amd64 (2:3.124-1) ... Removing libnspr4:amd64 (2:4.38.2-1+b1) ... Removing libopenjp2-7:amd64 (2.5.4-1.1) ... Removing libp11-kit0:amd64 (0.26.2-2) ... Removing libpciaccess0:amd64 (0.17-3+b4) ... Removing libpcsclite1:amd64 (2.5.0-1) ... Removing libpixman-1-0:amd64 (0.46.4-1+b2) ... Removing librav1e0.8:amd64 (0.8.1-10) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-11) ... Removing libsasl2-modules:amd64 (2.1.28+dfsg1-11) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-11) ... Removing libsensors5:amd64 (1:3.6.2-2+b2) ... Removing libsensors-config (1:3.6.2-2) ... Removing libwebpmux3:amd64 (1.5.0-0.1+b2) ... Removing libwebpdemux2:amd64 (1.5.0-0.1+b2) ... Removing libwebp7:amd64 (1.5.0-0.1+b2) ... Removing libsharpyuv0:amd64 (1.5.0-0.1+b2) ... Removing libsnappy1v5:amd64 (1.2.2-2+b2) ... Removing libssh2-1t64:amd64 (1.11.1-3) ... Removing libsvtav1enc4:amd64 (4.1.0+dfsg-1) ... Removing libsz2:amd64 (1.1.7-1) ... Removing libtasn1-6:amd64 (4.21.0-2+b1) ... Removing libtbbmalloc2:amd64 (2022.3.0-2) ... Removing libtcl8.6:amd64 (8.6.18+dfsg-1) ... Removing libunistring5:amd64 (1.4.2-1) ... Removing libvulkan1:amd64 (1.4.341.0-1) ... Removing libxxf86vm1:amd64 (1:1.1.4-2+b1) ... Removing libxss1:amd64 (1:1.2.3-1+b4) ... Removing libx11-xcb1:amd64 (2:1.8.13-1) ... Removing libxcb-xfixes0:amd64 (1.17.0-2+b2) ... Removing libxcb-sync1:amd64 (1.17.0-2+b2) ... Removing libxcb-dri3-0:amd64 (1.17.0-2+b2) ... Removing libxcb-glx0:amd64 (1.17.0-2+b2) ... Removing libxcb-present0:amd64 (1.17.0-2+b2) ... Removing libxcb-randr0:amd64 (1.17.0-2+b2) ... Removing libxcb-render0:amd64 (1.17.0-2+b2) ... Removing libxcb-shm0:amd64 (1.17.0-2+b2) ... Removing libxnvctrl0:amd64 (535.171.04-1+b3) ... Removing libxext6:amd64 (2:1.3.4-1+b4) ... Removing libxrender1:amd64 (1:0.9.12-1+b2) ... Removing libxshmfence1:amd64 (1.3.3-1+b2) ... Removing libyaml-0-2:amd64 (0.2.5-2+b1) ... Removing libz3-4:amd64 (4.13.3-1.1) ... Removing libze1:amd64 (1.28.2-2) ... Removing pigz (2.8-2) ... Removing linux-libc-dev (7.0.10-1) ... Removing make (4.4.1-3) ... Removing manpages-dev (6.18-1) ... Removing manpages (6.18-1) ... Removing ncbi-data (6.1.20170106+dfsg2-7) ... Removing ncbi-vdb-data (3.2.1+dfsg-2) ... Removing node-commander (14.0.3-7) ... Removing node-mj-context-menu (0.9.1+ds-2) ... Removing node-xmldom (0.9.9-1) ... Removing nodejs-doc (24.15.0+dfsg+~cs24.12.2-1) ... Removing ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Removing sq (1.3.1-9+b1) ... Removing patch (2.8-2) ... Removing perl-modules-5.40 (5.40.1-7) ... Removing prodigal (1:2.6.3-6) ... Removing publicsuffix (20260428.1050-1) ... Removing python3-babel (2.17.0-2) ... Removing python-babel-localedata (2.17.0-2) ... Removing python-odf-tools (1.4.2-4) ... Removing python-tables-data (3.11.1-1) ... Removing python3-bottleneck (1.4.2+ds1-2+b2) ... Removing python3-bs4 (4.14.3-2) ... Removing python3-certifi (2026.5.20+ds-1) ... Removing python3-chardet (5.2.0+dfsg-2) ... Removing python3-charset-normalizer (3.4.7-1) ... Removing python3-contourpy (1.3.3-1+b1) ... Removing python3-cpuinfo (9.0.0+git20221119-3) ... Removing python3-cssselect (1.4.0-1) ... Removing python3-cycler (0.12.1-2) ... Removing python3-dateutil (2.9.0-4) ... Removing python3-odf (1.4.2-4) ... Removing python3-defusedxml (0.7.1-3) ... Removing python3-et-xmlfile (2.0.0-2) ... Removing python3-freetype (2.5.1-2) ... Removing python3-html5lib (1.2-3) ... Removing python3-idna (3.11-1) ... Removing python3-jinja2 (3.1.6-2) ... Removing python3-kiwisolver (1.5.0-1) ... Removing python3-legacy-cgi (2.6.4-2) ... Removing python3-llvmlite (0.47.0-0.1) ... Removing python3-markupsafe (3.0.3-1+b1) ... Removing python3-numexpr (2.14.1-1+b1) ... Removing python3-olefile (0.47-1) ... Removing python3-packaging (26.0-1) ... Removing python3-platformdirs (4.10.0-1) ... Removing python3-pyparsing (3.3.2-2) ... Removing python3-pytz (2025.2-6) ... Removing python3-soupsieve (2.8.4-1) ... Removing python3-typing-extensions (4.15.0-2) ... Removing python3-urllib3 (2.6.3-2) ... Removing python3-webencodings (0.5.1-5) ... Removing rpcsvc-proto (1.4.4-1) ... Removing w3c-sgml-lib (1.3-3) ... Removing xml-core (0.20) ... Removing sgml-base (1.31+nmu1) ... Removing xdg-user-dirs (0.20-1) ... Removing xz-utils (5.8.3-1) ... Removing gcc-15 (15.2.0-17) ... Removing binutils (2.46-3) ... Removing libgprofng0:amd64 (2.46-3) ... Removing gcc-15-x86-64-linux-gnu (15.2.0-17) ... Removing binutils-x86-64-linux-gnu (2.46-3) ... Removing libctf0:amd64 (2.46-3) ... Removing libbinutils:amd64 (2.46-3) ... Removing binutils-common:amd64 (2.46-3) ... Removing ca-certificates (20260223) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing cpp-15 (15.2.0-17) ... Removing cpp-15-x86-64-linux-gnu (15.2.0-17) ... Removing libfontconfig1:amd64 (2.17.1-5) ... Removing fontconfig-config (2.17.1-5) ... Removing fonts-urw-base35 (20200910-9) ... Removing libgcc-15-dev:amd64 (15.2.0-17) ... Removing gcc-15-base:amd64 (15.2.0-17) ... Removing libasan8:amd64 (16.1.0-1) ... Removing xfonts-utils (1:7.7+7) ... Removing libcc1-0:amd64 (16.1.0-1) ... Removing libctf-nobfd0:amd64 (2.46-3) ... Removing libfontenc1:amd64 (1:1.1.8-1+b3) ... Removing libgomp1:amd64 (16.1.0-1) ... Removing libhwasan0:amd64 (16.1.0-1) ... Removing libisl23:amd64 (0.27-2) ... Removing libitm1:amd64 (16.1.0-1) ... Removing libjansson4:amd64 (2.14-2+b4) ... Removing liblsan0:amd64 (16.1.0-1) ... Removing libmpc3:amd64 (1.3.1-3) ... Removing libmpfr6:amd64 (4.2.2-3) ... Removing libquadmath0:amd64 (16.1.0-1) ... Removing libsframe3:amd64 (2.46-3) ... Removing libtsan2:amd64 (16.1.0-1) ... Removing libubsan1:amd64 (16.1.0-1) ... Removing libx11-6:amd64 (2:1.8.13-1) ... Removing libx11-data (2:1.8.13-1) ... Removing libxcb1:amd64 (1.17.0-2+b2) ... Removing libxau6:amd64 (1:1.0.11-1+b2) ... Removing libxdmcp6:amd64 (1:1.1.5-2+b1) ... Removing openssl (3.6.2-1) ... Removing xfonts-encodings (1:1.0.4-2.2) ... Removing x11-common (1:7.7+26) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing nodejs (24.15.0+dfsg+~cs24.12.2-1+b1) ... Removing python3-fonttools (4.62.1-7) ... Removing python3-uharfbuzz (0.53.3-1+b1) ... Removing python3-scipy (1.16.3-4) ... Removing python3-numpy (1:2.3.5+ds-3+b1) ... Removing liblapack3:amd64 (3.12.1-7+b2) ... Removing libblas3:amd64 (3.12.1-7+b2) ... Removing python3-lxml:amd64 (6.1.0-1) ... Removing libxslt1.1:amd64 (1.1.45-0.1) ... Removing libgcrypt20:amd64 (1.12.2-1) ... Removing libgfortran5:amd64 (16.1.0-1) ... Removing libgpg-error0:amd64 (1.59-4) ... Removing libharfbuzz-subset0:amd64 (12.3.2-2+b2) ... Removing libqhull-r8.0:amd64 (2020.2-9) ... Removing libxml2-16:amd64 (2.15.2+dfsg-0.1) ... Removing python3-zopfli (0.4.2-1) ... Removing libzopfli1 (1.0.3-3) ... Removing node-corepack (0.24.0-5) ... Removing python3-brotli (1.2.0-3) ... Removing python3-decorator (5.2.1-2) ... Removing python3-lz4 (4.4.5+dfsg-1) ... Removing python3-sympy (1.14.0-3) ... Removing python3-mpmath (1.4.1-2) ... Removing python3-numpy-dev:amd64 (1:2.3.5+ds-3+b1) ... Removing python3-unicodedata2 (17.0.1+ds-1) ... Removing unicode-data (17.0.0-2) ... Removing libnode137:amd64 (24.15.0+dfsg+~cs24.12.2-1+b1) ... Removing node-undici (7.24.6+dfsg+~cs3.2.0-3) ... Removing node-llhttp (9.4.1+~cs12.11.9-3) ... Removing node-semver (7.7.4+~cs9.7.4-1) ... Removing libada-url0-3:amd64 (3.4.4-1) ... Removing python3-ufolib2 (0.18.1+dfsg1-1) ... Removing libharfbuzz0b:amd64 (12.3.2-2+b2) ... Removing libglib2.0-0t64:amd64 (2.88.1-2) ... Removing libatomic1:amd64 (16.1.0-1) ... Removing libfreetype6:amd64 (2.14.3+dfsg-1) ... Removing libbrotli1:amd64 (1.2.0-3) ... Removing libcares2:amd64 (1.34.6-1+b1) ... Removing libgraphite2-3:amd64 (1.3.15-2) ... Removing libicu78:amd64 (78.3-2) ... Removing libllhttp9.4:amd64 (9.4.1+~cs12.11.9-3) ... Removing libnghttp2-14:amd64 (1.69.0-1) ... Removing libpng16-16t64:amd64 (1.6.58-1) ... Removing libsimdjson33:amd64 (4.6.4-1) ... Removing libsimdutf33:amd64 (8.2.0-1) ... Removing libuv1t64:amd64 (1.52.1-4) ... Removing node-acorn (8.16.0+ds+~cs25.18.7-4) ... Removing node-minimatch (9.0.7-1) ... Removing node-brace-expansion (2.0.3+~1.1.2-2) ... Removing node-balanced-match (2.0.0-1) ... Removing node-debug (4.4.3+~4.1.13-1) ... Removing node-lru-cache (11.2.7-6) ... Removing node-ms (2.1.3+~cs0.7.31-3) ... Removing node-xtend (4.0.2-3) ... Removing python3-attr (26.1.0-1) ... Removing python3 (3.13.9-3+b1) ... Removing python3.13 (3.13.12-1) ... Removing python3-minimal (3.13.9-3+b1) ... Removing python3.13-minimal (3.13.12-1) ... Removing libexpat1:amd64 (2.8.1-1) ... Removing libpython3-stdlib:amd64 (3.13.9-3+b1) ... Removing libpython3.13-stdlib:amd64 (3.13.12-1) ... find: '/usr/lib/python3': No such file or directory Removing libffi8:amd64 (3.5.2-4) ... Removing libncursesw6:amd64 (6.6+20251231-1+b1) ... Removing libpython3.13-minimal:amd64 (3.13.12-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.3-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing media-types (14.0.0) ... Removing netbase (6.5) ... Removing readline-common (8.3-4) ... Processing triggers for libc-bin (2.42-16) ... 3m30.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', 'remove', '--allow-remove-essential', 'alsa-topology-conf', 'alsa-ucm-conf', 'bbmap', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'build-essential', 'bzip2', 'ca-certificates', 'ca-certificates-java', 'cpp', 'cpp-15', 'cpp-15-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'default-jre-headless', 'dpkg-dev', 'fakeroot', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-font-awesome', 'fonts-lato', 'fonts-lyx', 'fonts-urw-base35', 'g++-', 'g++-15', 'g++-15-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-15', 'gcc-15-base:amd64', 'gcc-15-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'hmmer', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'javascript-common', 'krb5-locales', 'libabsl20260107:amd64', 'libada-url0-3:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl', 'libalgorithm-merge-perl', 'libaom3:amd64', 'libapache-pom-java', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libatomic1:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libblosc2-7:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcares2:amd64', 'libcc1-0:amd64', 'libcom-err2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-io-java', 'libcommons-parent-java', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl4t64:amd64', 'libdav1d7:amd64', 'libdbus-1-3:amd64', 'libdeflate0:amd64', 'libdisplay-info3:amd64', 'libdivsufsort3:amd64', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libfakeroot:amd64', 'libffi8:amd64', 'libfile-fcntllock-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgav1-2:amd64', 'libgbm1:amd64', 'libgcc-15-dev:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error-l10n', 'libgpg-error0:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz-subset0:amd64', 'libharfbuzz0b:amd64', 'libhdf5-310:amd64', 'libhwasan0:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-common', 'libldap2:amd64', 'liblerc4:amd64', 'libllhttp9.4:amd64', 'libllvm21:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblog4j1.2-java', 'liblsan0:amd64', 'liblzo2-2:amd64', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libmpj-java', 'libncbi-vdb3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libnode137:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libopenjp2-7:amd64', 'libp11-kit0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.40:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'librav1e0.8:amd64', 'libreadline8t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsframe3:amd64', 'libsharpyuv0:amd64', 'libsimdjson33:amd64', 'libsimdutf33:amd64', 'libskia146:amd64', 'libsnappy1v5:amd64', 'libssh2-1t64:amd64', 'libstdc++-15-dev:amd64', 'libsvtav1enc4:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2-16:amd64', 'libxnvctrl0:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyuv0:amd64', 'libz3-4:amd64', 'libze1:amd64', 'libzopfli1', 'linux-libc-dev', 'make', 'manpages', 'manpages-dev', 'media-types', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'ncbi-blast+-', 'ncbi-data', 'ncbi-vdb-data', 'netbase', 'node-acorn', 'node-balanced-match', 'node-brace-expansion', 'node-commander', 'node-corepack', 'node-debug', 'node-llhttp', 'node-lru-cache', 'node-mathjax-full', 'node-minimatch', 'node-mj-context-menu', 'node-ms', 'node-semver', 'node-speech-rule-engine', 'node-undici', 'node-xmldom', 'node-xtend', 'nodejs', 'nodejs-doc', 'numba-doc', 'ocl-icd-libopencl1:amd64', 'openjdk-25-jre-headless:amd64', 'openssl', 'patch', 'perl', 'perl-modules-5.40', 'pigz', 'prodigal', 'publicsuffix', 'python-babel-localedata', 'python-biopython-doc', 'python-matplotlib-data', 'python-odf-doc', 'python-odf-tools', 'python-tables-data', 'python3', 'python3-attr', 'python3-babel', 'python3-biopython', 'python3-bottleneck', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cpuinfo', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-defusedxml', 'python3-dev', 'python3-et-xmlfile', 'python3-fonttools', 'python3-freetype', 'python3-html5lib', 'python3-idna', 'python3-jinja2', 'python3-kiwisolver', 'python3-legacy-cgi', 'python3-llvmlite', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-numba', 'python3-numexpr', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-odf', 'python3-olefile', 'python3-openpyxl', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pip', 'python3-platformdirs', 'python3-pooch', 'python3-pyparsing', 'python3-pytz', 'python3-reportlab', 'python3-requests', 'python3-rlpycairo', 'python3-scipy', 'python3-skia-pathops', 'python3-soupsieve', 'python3-sympy', 'python3-tables', 'python3-tables-lib', 'python3-tk', 'python3-tqdm', 'python3-typing-extensions', 'python3-ufolib2', 'python3-uharfbuzz', 'python3-unicodedata2', 'python3-urllib3', 'python3-webencodings', 'python3-wheel', 'python3-yaml', 'python3-zopfli', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'python3.13-tk', 'python3.14-tk', 'readline-common', 'rpcsvc-proto', 'sgml-base', 'shared-mime-info', 'sphinx-rtd-theme-common', 'sq', 'sse4.2-support', 'unicode-data', 'w3c-sgml-lib', 'x11-common', 'xdg-user-dirs', 'xfonts-encodings', 'xfonts-utils', 'xml-core', 'xz-utils', 'zlib1g-dev:amd64', 'busco'] 3m30.6s INFO: Running scripts post_remove 3m30.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_remove_exceptions'] 3m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_remove_exceptions'] 3m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg', '--purge', 'alsa-topology-conf', 'alsa-ucm-conf', 'bbmap', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'build-essential', 'bzip2', 'ca-certificates', 'ca-certificates-java', 'cpp', 'cpp-15', 'cpp-15-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'default-jre-headless', 'dpkg-dev', 'fakeroot', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-font-awesome', 'fonts-lato', 'fonts-lyx', 'fonts-urw-base35', 'g++', 'g++-15', 'g++-15-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-15', 'gcc-15-base:amd64', 'gcc-15-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'hmmer', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'javascript-common', 'krb5-locales', 'libabsl20260107:amd64', 'libada-url0-3:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl', 'libalgorithm-merge-perl', 'libaom3:amd64', 'libapache-pom-java', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libatomic1:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libblosc2-7:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcares2:amd64', 'libcc1-0:amd64', 'libcom-err2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-io-java', 'libcommons-parent-java', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl4t64:amd64', 'libdav1d7:amd64', 'libdbus-1-3:amd64', 'libdeflate0:amd64', 'libdisplay-info3:amd64', 'libdivsufsort3:amd64', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libfakeroot:amd64', 'libffi8:amd64', 'libfile-fcntllock-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgav1-2:amd64', 'libgbm1:amd64', 'libgcc-15-dev:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error-l10n', 'libgpg-error0:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz-subset0:amd64', 'libharfbuzz0b:amd64', 'libhdf5-310:amd64', 'libhwasan0:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-common', 'libldap2:amd64', 'liblerc4:amd64', 'libllhttp9.4:amd64', 'libllvm21:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblog4j1.2-java', 'liblsan0:amd64', 'liblzo2-2:amd64', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libmpj-java', 'libncbi-vdb3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libnode137:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libopenjp2-7:amd64', 'libp11-kit0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.40:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'librav1e0.8:amd64', 'libreadline8t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsframe3:amd64', 'libsharpyuv0:amd64', 'libsimdjson33:amd64', 'libsimdutf33:amd64', 'libskia146:amd64', 'libsnappy1v5:amd64', 'libssh2-1t64:amd64', 'libstdc++-15-dev:amd64', 'libsvtav1enc4:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2-16:amd64', 'libxnvctrl0:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyuv0:amd64', 'libz3-4:amd64', 'libze1:amd64', 'libzopfli1', 'linux-libc-dev', 'make', 'manpages', 'manpages-dev', 'media-types', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'ncbi-blast+', 'ncbi-data', 'ncbi-vdb-data', 'netbase', 'node-acorn', 'node-balanced-match', 'node-brace-expansion', 'node-commander', 'node-corepack', 'node-debug', 'node-llhttp', 'node-lru-cache', 'node-mathjax-full', 'node-minimatch', 'node-mj-context-menu', 'node-ms', 'node-semver', 'node-speech-rule-engine', 'node-undici', 'node-xmldom', 'node-xtend', 'nodejs', 'nodejs-doc', 'numba-doc', 'ocl-icd-libopencl1:amd64', 'openjdk-25-jre-headless:amd64', 'openssl', 'patch', 'perl', 'perl-modules-5.40', 'pigz', 'prodigal', 'publicsuffix', 'python-babel-localedata', 'python-biopython-doc', 'python-matplotlib-data', 'python-odf-doc', 'python-odf-tools', 'python-tables-data', 'python3', 'python3-attr', 'python3-babel', 'python3-biopython', 'python3-bottleneck', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cpuinfo', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-defusedxml', 'python3-dev', 'python3-et-xmlfile', 'python3-fonttools', 'python3-freetype', 'python3-html5lib', 'python3-idna', 'python3-jinja2', 'python3-kiwisolver', 'python3-legacy-cgi', 'python3-llvmlite', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-numba', 'python3-numexpr', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-odf', 'python3-olefile', 'python3-openpyxl', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pip', 'python3-platformdirs', 'python3-pooch', 'python3-pyparsing', 'python3-pytz', 'python3-reportlab', 'python3-requests', 'python3-rlpycairo', 'python3-scipy', 'python3-skia-pathops', 'python3-soupsieve', 'python3-sympy', 'python3-tables', 'python3-tables-lib', 'python3-tk', 'python3-tqdm', 'python3-typing-extensions', 'python3-ufolib2', 'python3-uharfbuzz', 'python3-unicodedata2', 'python3-urllib3', 'python3-webencodings', 'python3-wheel', 'python3-yaml', 'python3-zopfli', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'python3.13-tk', 'python3.14-tk', 'readline-common', 'rpcsvc-proto', 'sgml-base', 'shared-mime-info', 'sphinx-rtd-theme-common', 'sq', 'sse4.2-support', 'unicode-data', 'w3c-sgml-lib', 'x11-common', 'xdg-user-dirs', 'xfonts-encodings', 'xfonts-utils', 'xml-core', 'xz-utils', 'zlib1g-dev:amd64'] 3m31.3s DUMP: dpkg: warning: ignoring request to remove alsa-topology-conf which is not installed dpkg: warning: ignoring request to remove alsa-ucm-conf which is not installed dpkg: warning: ignoring request to remove bbmap which is not installed (Reading database ... 5196 files and directories currently installed.) Purging configuration files for binutils (2.46-3) ... Purging configuration files for binutils-common:amd64 (2.46-3) ... dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove build-essential which is not installed dpkg: warning: ignoring request to remove bzip2 which is not installed Purging configuration files for ca-certificates (20260223) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for ca-certificates-java (20260311) ... Purging configuration files for cpp (4:15.2.0-5) ... dpkg: warning: ignoring request to remove cpp-15 which is not installed dpkg: warning: ignoring request to remove cpp-15-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove cpp-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove default-jre-headless which is not installed Purging configuration files for dpkg-dev (1.23.7) ... dpkg: warning: ignoring request to remove fakeroot which is not installed Purging configuration files for fontconfig-config (2.17.1-5) ... Purging configuration files for fonts-dejavu-core (2.37-9) ... dpkg: warning: ignoring request to remove fonts-dejavu-extra which is not installed Purging configuration files for fonts-dejavu-mono (2.37-9) ... Purging configuration files for fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... dpkg: warning: ignoring request to remove fonts-lato which is not installed dpkg: warning: ignoring request to remove fonts-lyx which is not installed Purging configuration files for fonts-urw-base35 (20200910-9) ... dpkg: warning: ignoring request to remove g++ which is not installed dpkg: warning: ignoring request to remove g++-15 which is not installed dpkg: warning: ignoring request to remove g++-15-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove g++-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove gcc which is not installed dpkg: warning: ignoring request to remove gcc-15 which is not installed dpkg: warning: ignoring request to remove gcc-15-base which is not installed dpkg: warning: ignoring request to remove gcc-15-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove gcc-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove hmmer which is not installed dpkg: warning: ignoring request to remove isa-support which is not installed dpkg: warning: ignoring request to remove isympy-common which is not installed dpkg: warning: ignoring request to remove isympy3 which is not installed Purging configuration files for java-common (0.77) ... Purging configuration files for javascript-common (12+nmu1) ... dpkg: warning: ignoring request to remove krb5-locales which is not installed dpkg: warning: ignoring request to remove libabsl20260107 which is not installed dpkg: warning: ignoring request to remove libada-url0-3 which is not installed dpkg: warning: ignoring request to remove libalgorithm-diff-perl which is not installed dpkg: warning: ignoring request to remove libalgorithm-diff-xs-perl which is not installed dpkg: warning: ignoring request to remove libalgorithm-merge-perl which is not installed dpkg: warning: ignoring request to remove libaom3 which is not installed dpkg: warning: ignoring request to remove libapache-pom-java which is not installed dpkg: warning: ignoring request to remove libasan8 which is not installed dpkg: warning: ignoring request to remove libasound2-data which is not installed dpkg: warning: ignoring request to remove libasound2t64 which is not installed dpkg: warning: ignoring request to remove libatomic1 which is not installed dpkg: warning: ignoring request to remove libavahi-client3 which is not installed dpkg: warning: ignoring request to remove libavahi-common-data which is not installed dpkg: warning: ignoring request to remove libavahi-common3 which is not installed dpkg: warning: ignoring request to remove libavif16 which is not installed dpkg: warning: ignoring request to remove libbinutils which is not installed dpkg: warning: ignoring request to remove libblas3 which is not installed dpkg: warning: ignoring request to remove libblosc1 which is not installed dpkg: warning: ignoring request to remove libblosc2-7 which is not installed dpkg: warning: ignoring request to remove libbrotli1 which is not installed dpkg: warning: ignoring request to remove libc-dev-bin which is not installed dpkg: warning: ignoring request to remove libc6-dev which is not installed dpkg: warning: ignoring request to remove libcairo2 which is not installed dpkg: warning: ignoring request to remove libcares2 which is not installed dpkg: warning: ignoring request to remove libcc1-0 which is not installed dpkg: warning: ignoring request to remove libcom-err2 which is not installed dpkg: warning: ignoring request to remove libcommons-cli-java which is not installed dpkg: warning: ignoring request to remove libcommons-codec-java which is not installed dpkg: warning: ignoring request to remove libcommons-io-java which is not installed dpkg: warning: ignoring request to remove libcommons-parent-java which is not installed dpkg: warning: ignoring request to remove libctf-nobfd0 which is not installed dpkg: warning: ignoring request to remove libctf0 which is not installed dpkg: warning: ignoring request to remove libcups2t64 which is not installed dpkg: warning: ignoring request to remove libcurl4t64 which is not installed dpkg: warning: ignoring request to remove libdav1d7 which is not installed dpkg: warning: ignoring request to remove libdbus-1-3 which is not installed dpkg: warning: ignoring request to remove libdeflate0 which is not installed dpkg: warning: ignoring request to remove libdisplay-info3 which is not installed dpkg: warning: ignoring request to remove libdivsufsort3 which is not installed dpkg: warning: ignoring request to remove libdpkg-perl which is not installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which is not installed dpkg: warning: ignoring request to remove libdrm-common which is not installed dpkg: warning: ignoring request to remove libdrm-intel1 which is not installed dpkg: warning: ignoring request to remove libdrm2 which is not installed dpkg: warning: ignoring request to remove libedit2 which is not installed dpkg: warning: ignoring request to remove libelf1t64 which is not installed dpkg: warning: ignoring request to remove libexpat1 which is not installed dpkg: warning: ignoring request to remove libexpat1-dev which is not installed Purging configuration files for libfakeroot:amd64 (1.38.1-1) ... dpkg: warning: ignoring request to remove libffi8 which is not installed dpkg: warning: ignoring request to remove libfile-fcntllock-perl which is not installed dpkg: warning: ignoring request to remove libfontconfig1 which is not installed dpkg: warning: ignoring request to remove libfontenc1 which is not installed dpkg: warning: ignoring request to remove libfreetype6 which is not installed dpkg: warning: ignoring request to remove libfribidi0 which is not installed dpkg: warning: ignoring request to remove libgav1-2 which is not installed dpkg: warning: ignoring request to remove libgbm1 which is not installed dpkg: warning: ignoring request to remove libgcc-15-dev which is not installed dpkg: warning: ignoring request to remove libgcrypt20 which is not installed dpkg: warning: ignoring request to remove libgdbm-compat4t64 which is not installed dpkg: warning: ignoring request to remove libgdbm6t64 which is not installed dpkg: warning: ignoring request to remove libgfortran5 which is not installed dpkg: warning: ignoring request to remove libgl1 which is not installed Purging configuration files for libgl1-mesa-dri:amd64 (26.0.6-1) ... Purging configuration files for libglib2.0-0t64:amd64 (2.88.1-2) ... dpkg: warning: ignoring request to remove libglib2.0-data which is not installed dpkg: warning: ignoring request to remove libglvnd0 which is not installed dpkg: warning: ignoring request to remove libglx-mesa0 which is not installed dpkg: warning: ignoring request to remove libglx0 which is not installed dpkg: warning: ignoring request to remove libgnutls30t64 which is not installed dpkg: warning: ignoring request to remove libgomp1 which is not installed dpkg: warning: ignoring request to remove libgpg-error-l10n which is not installed dpkg: warning: ignoring request to remove libgpg-error0 which is not installed dpkg: warning: ignoring request to remove libgpm2 which is not installed dpkg: warning: ignoring request to remove libgprofng0 which is not installed dpkg: warning: ignoring request to remove libgraphite2-3 which is not installed Purging configuration files for libgssapi-krb5-2:amd64 (1.22.1-2.1) ... dpkg: warning: ignoring request to remove libharfbuzz-subset0 which is not installed dpkg: warning: ignoring request to remove libharfbuzz0b which is not installed dpkg: warning: ignoring request to remove libhdf5-310 which is not installed dpkg: warning: ignoring request to remove libhwasan0 which is not installed dpkg: warning: ignoring request to remove libhwloc-plugins which is not installed dpkg: warning: ignoring request to remove libhwloc15 which is not installed dpkg: warning: ignoring request to remove libicu78 which is not installed dpkg: warning: ignoring request to remove libidn2-0 which is not installed dpkg: warning: ignoring request to remove libimagequant0 which is not installed dpkg: warning: ignoring request to remove libisl23 which is not installed dpkg: warning: ignoring request to remove libitm1 which is not installed dpkg: warning: ignoring request to remove libjansson4 which is not installed dpkg: warning: ignoring request to remove libjbig0 which is not installed dpkg: warning: ignoring request to remove libjpeg62-turbo which is not installed Purging configuration files for libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... dpkg: warning: ignoring request to remove libjs-sphinxdoc which is not installed dpkg: warning: ignoring request to remove libk5crypto3 which is not installed dpkg: warning: ignoring request to remove libkeyutils1 which is not installed dpkg: warning: ignoring request to remove libkrb5-3 which is not installed dpkg: warning: ignoring request to remove libkrb5support0 which is not installed dpkg: warning: ignoring request to remove liblapack3 which is not installed dpkg: warning: ignoring request to remove liblcms2-2 which is not installed Purging configuration files for libldap-common (2.6.10+dfsg-1) ... dpkg: warning: ignoring request to remove libldap2 which is not installed dpkg: warning: ignoring request to remove liblerc4 which is not installed dpkg: warning: ignoring request to remove libllhttp9.4 which is not installed dpkg: warning: ignoring request to remove libllvm21 which is not installed dpkg: warning: ignoring request to remove liblmdb0 which is not installed dpkg: warning: ignoring request to remove liblocale-gettext-perl which is not installed dpkg: warning: ignoring request to remove liblog4j1.2-java which is not installed dpkg: warning: ignoring request to remove liblsan0 which is not installed dpkg: warning: ignoring request to remove liblzo2-2 which is not installed dpkg: warning: ignoring request to remove libmbedcrypto16 which is not installed dpkg: warning: ignoring request to remove libmbedtls21 which is not installed dpkg: warning: ignoring request to remove libmbedx509-7 which is not installed dpkg: warning: ignoring request to remove libmpc3 which is not installed dpkg: warning: ignoring request to remove libmpfr6 which is not installed Purging configuration files for libmpj-java (0.44+dfsg-4) ... dpkg: warning: ignoring request to remove libncbi-vdb3 which is not installed dpkg: warning: ignoring request to remove libncursesw6 which is not installed dpkg: warning: ignoring request to remove libnghttp2-14 which is not installed dpkg: warning: ignoring request to remove libnghttp3-9 which is not installed dpkg: warning: ignoring request to remove libngtcp2-16 which is not installed dpkg: warning: ignoring request to remove libngtcp2-crypto-ossl0 which is not installed dpkg: warning: ignoring request to remove libnode137 which is not installed dpkg: warning: ignoring request to remove libnspr4 which is not installed dpkg: warning: ignoring request to remove libnss3 which is not installed dpkg: warning: ignoring request to remove libopenjp2-7 which is not installed dpkg: warning: ignoring request to remove libp11-kit0 which is not installed dpkg: warning: ignoring request to remove libpciaccess0 which is not installed dpkg: warning: ignoring request to remove libpcsclite1 which is not installed dpkg: warning: ignoring request to remove libperl5.40 which is not installed dpkg: warning: ignoring request to remove libpixman-1-0 which is not installed dpkg: warning: ignoring request to remove libpng16-16t64 which is not installed dpkg: warning: ignoring request to remove libpsl5t64 which is not installed dpkg: warning: ignoring request to remove libpython3-dev which is not installed dpkg: warning: ignoring request to remove libpython3-stdlib which is not installed dpkg: warning: ignoring request to remove libpython3.13 which is not installed dpkg: warning: ignoring request to remove libpython3.13-dev which is not installed Purging configuration files for libpython3.13-minimal:amd64 (3.13.12-1) ... dpkg: warning: ignoring request to remove libpython3.13-stdlib which is not installed dpkg: warning: ignoring request to remove libqhull-r8.0 which is not installed dpkg: warning: ignoring request to remove libquadmath0 which is not installed dpkg: warning: ignoring request to remove libraqm0 which is not installed dpkg: warning: ignoring request to remove librav1e0.8 which is not installed Purging configuration files for libreadline8t64:amd64 (8.3-4) ... dpkg: warning: ignoring request to remove libsasl2-2 which is not installed Purging configuration files for libsasl2-modules:amd64 (2.1.28+dfsg1-11) ... dpkg: warning: ignoring request to remove libsasl2-modules-db which is not installed Purging configuration files for libsensors-config (1:3.6.2-2) ... dpkg: warning: ignoring request to remove libsensors5 which is not installed dpkg: warning: ignoring request to remove libsframe3 which is not installed dpkg: warning: ignoring request to remove libsharpyuv0 which is not installed dpkg: warning: ignoring request to remove libsimdjson33 which is not installed dpkg: warning: ignoring request to remove libsimdutf33 which is not installed dpkg: warning: ignoring request to remove libskia146 which is not installed dpkg: warning: ignoring request to remove libsnappy1v5 which is not installed dpkg: warning: ignoring request to remove libssh2-1t64 which is not installed dpkg: warning: ignoring request to remove libstdc++-15-dev which is not installed dpkg: warning: ignoring request to remove libsvtav1enc4 which is not installed dpkg: warning: ignoring request to remove libsz2 which is not installed dpkg: warning: ignoring request to remove libtasn1-6 which is not installed dpkg: warning: ignoring request to remove libtbb12 which is not installed dpkg: warning: ignoring request to remove libtbbbind-2-5 which is not installed dpkg: warning: ignoring request to remove libtbbmalloc2 which is not installed dpkg: warning: ignoring request to remove libtcl8.6 which is not installed dpkg: warning: ignoring request to remove libtiff6 which is not installed dpkg: warning: ignoring request to remove libtk8.6 which is not installed dpkg: warning: ignoring request to remove libtsan2 which is not installed dpkg: warning: ignoring request to remove libubsan1 which is not installed dpkg: warning: ignoring request to remove libunistring5 which is not installed dpkg: warning: ignoring request to remove libuv1t64 which is not installed dpkg: warning: ignoring request to remove libvulkan1 which is not installed dpkg: warning: ignoring request to remove libwayland-client0 which is not installed dpkg: warning: ignoring request to remove libwebp7 which is not installed dpkg: warning: ignoring request to remove libwebpdemux2 which is not installed dpkg: warning: ignoring request to remove libwebpmux3 which is not installed dpkg: warning: ignoring request to remove libx11-6 which is not installed dpkg: warning: ignoring request to remove libx11-data which is not installed dpkg: warning: ignoring request to remove libx11-xcb1 which is not installed dpkg: warning: ignoring request to remove libxau6 which is not installed dpkg: warning: ignoring request to remove libxcb-dri3-0 which is not installed dpkg: warning: ignoring request to remove libxcb-glx0 which is not installed dpkg: warning: ignoring request to remove libxcb-present0 which is not installed dpkg: warning: ignoring request to remove libxcb-randr0 which is not installed dpkg: warning: ignoring request to remove libxcb-render0 which is not installed dpkg: warning: ignoring request to remove libxcb-shm0 which is not installed dpkg: warning: ignoring request to remove libxcb-sync1 which is not installed dpkg: warning: ignoring request to remove libxcb-xfixes0 which is not installed dpkg: warning: ignoring request to remove libxcb1 which is not installed dpkg: warning: ignoring request to remove libxdmcp6 which is not installed dpkg: warning: ignoring request to remove libxext6 which is not installed dpkg: warning: ignoring request to remove libxft2 which is not installed dpkg: warning: ignoring request to remove libxml2-16 which is not installed dpkg: warning: ignoring request to remove libxnvctrl0 which is not installed dpkg: warning: ignoring request to remove libxrender1 which is not installed dpkg: warning: ignoring request to remove libxshmfence1 which is not installed dpkg: warning: ignoring request to remove libxslt1.1 which is not installed dpkg: warning: ignoring request to remove libxss1 which is not installed dpkg: warning: ignoring request to remove libxxf86vm1 which is not installed dpkg: warning: ignoring request to remove libyaml-0-2 which is not installed dpkg: warning: ignoring request to remove libyuv0 which is not installed dpkg: warning: ignoring request to remove libz3-4 which is not installed dpkg: warning: ignoring request to remove libze1 which is not installed dpkg: warning: ignoring request to remove libzopfli1 which is not installed dpkg: warning: ignoring request to remove linux-libc-dev which is not installed dpkg: warning: ignoring request to remove make which is not installed dpkg: warning: ignoring request to remove manpages which is not installed dpkg: warning: ignoring request to remove manpages-dev which is not installed Purging configuration files for media-types (14.0.0) ... dpkg: warning: ignoring request to remove mesa-libgallium which is not installed dpkg: warning: ignoring request to remove mesa-vulkan-drivers which is not installed dpkg: warning: ignoring request to remove ncbi-blast+ which is not installed Purging configuration files for ncbi-data (6.1.20170106+dfsg2-7) ... Purging configuration files for ncbi-vdb-data (3.2.1+dfsg-2) ... Purging configuration files for netbase (6.5) ... dpkg: warning: ignoring request to remove node-acorn which is not installed dpkg: warning: ignoring request to remove node-balanced-match which is not installed dpkg: warning: ignoring request to remove node-brace-expansion which is not installed dpkg: warning: ignoring request to remove node-commander which is not installed dpkg: warning: ignoring request to remove node-corepack which is not installed dpkg: warning: ignoring request to remove node-debug which is not installed dpkg: warning: ignoring request to remove node-llhttp which is not installed dpkg: warning: ignoring request to remove node-lru-cache which is not installed dpkg: warning: ignoring request to remove node-mathjax-full which is not installed dpkg: warning: ignoring request to remove node-minimatch which is not installed dpkg: warning: ignoring request to remove node-mj-context-menu which is not installed dpkg: warning: ignoring request to remove node-ms which is not installed dpkg: warning: ignoring request to remove node-semver which is not installed dpkg: warning: ignoring request to remove node-speech-rule-engine which is not installed Purging configuration files for node-undici (7.24.6+dfsg+~cs3.2.0-3) ... dpkg: warning: ignoring request to remove node-xmldom which is not installed dpkg: warning: ignoring request to remove node-xtend which is not installed dpkg: warning: ignoring request to remove nodejs which is not installed dpkg: warning: ignoring request to remove nodejs-doc which is not installed dpkg: warning: ignoring request to remove numba-doc which is not installed dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which is not installed Purging configuration files for openjdk-25-jre-headless:amd64 (25.0.3+9-2) ... Purging configuration files for openssl (3.6.2-1) ... dpkg: warning: ignoring request to remove patch which is not installed Purging configuration files for perl (5.40.1-7+b1) ... dpkg: warning: ignoring request to remove perl-modules-5.40 which is not installed dpkg: warning: ignoring request to remove pigz which is not installed dpkg: warning: ignoring request to remove prodigal which is not installed dpkg: warning: ignoring request to remove publicsuffix which is not installed dpkg: warning: ignoring request to remove python-babel-localedata which is not installed dpkg: warning: ignoring request to remove python-biopython-doc which is not installed Purging configuration files for python-matplotlib-data (3.10.7+dfsg1-5) ... dpkg: warning: ignoring request to remove python-odf-doc which is not installed dpkg: warning: ignoring request to remove python-odf-tools which is not installed dpkg: warning: ignoring request to remove python-tables-data which is not installed Purging configuration files for python3 (3.13.9-3+b1) ... dpkg: warning: ignoring request to remove python3-attr which is not installed dpkg: warning: ignoring request to remove python3-babel which is not installed dpkg: warning: ignoring request to remove python3-biopython which is not installed dpkg: warning: ignoring request to remove python3-bottleneck which is not installed dpkg: warning: ignoring request to remove python3-brotli which is not installed dpkg: warning: ignoring request to remove python3-bs4 which is not installed dpkg: warning: ignoring request to remove python3-cairo which is not installed dpkg: warning: ignoring request to remove python3-certifi which is not installed dpkg: warning: ignoring request to remove python3-chardet which is not installed dpkg: warning: ignoring request to remove python3-charset-normalizer which is not installed dpkg: warning: ignoring request to remove python3-contourpy which is not installed dpkg: warning: ignoring request to remove python3-cpuinfo which is not installed dpkg: warning: ignoring request to remove python3-cssselect which is not installed dpkg: warning: ignoring request to remove python3-cycler which is not installed dpkg: warning: ignoring request to remove python3-dateutil which is not installed dpkg: warning: ignoring request to remove python3-decorator which is not installed dpkg: warning: ignoring request to remove python3-defusedxml which is not installed dpkg: warning: ignoring request to remove python3-dev which is not installed dpkg: warning: ignoring request to remove python3-et-xmlfile which is not installed dpkg: warning: ignoring request to remove python3-fonttools which is not installed dpkg: warning: ignoring request to remove python3-freetype which is not installed dpkg: warning: ignoring request to remove python3-html5lib which is not installed dpkg: warning: ignoring request to remove python3-idna which is not installed dpkg: warning: ignoring request to remove python3-jinja2 which is not installed dpkg: warning: ignoring request to remove python3-kiwisolver which is not installed dpkg: warning: ignoring request to remove python3-legacy-cgi which is not installed dpkg: warning: ignoring request to remove python3-llvmlite which is not installed dpkg: warning: ignoring request to remove python3-lxml which is not installed dpkg: warning: ignoring request to remove python3-lz4 which is not installed dpkg: warning: ignoring request to remove python3-markupsafe which is not installed dpkg: warning: ignoring request to remove python3-matplotlib which is not installed dpkg: warning: ignoring request to remove python3-minimal which is not installed dpkg: warning: ignoring request to remove python3-mpmath which is not installed dpkg: warning: ignoring request to remove python3-numba which is not installed dpkg: warning: ignoring request to remove python3-numexpr which is not installed Purging configuration files for python3-numpy (1:2.3.5+ds-3+b1) ... dpkg: warning: ignoring request to remove python3-numpy-dev which is not installed dpkg: warning: ignoring request to remove python3-odf which is not installed dpkg: warning: ignoring request to remove python3-olefile which is not installed dpkg: warning: ignoring request to remove python3-openpyxl which is not installed dpkg: warning: ignoring request to remove python3-packaging which is not installed dpkg: warning: ignoring request to remove python3-pandas which is not installed dpkg: warning: ignoring request to remove python3-pandas-lib which is not installed dpkg: warning: ignoring request to remove python3-pil which is not installed dpkg: warning: ignoring request to remove python3-pil.imagetk which is not installed dpkg: warning: ignoring request to remove python3-pip which is not installed dpkg: warning: ignoring request to remove python3-platformdirs which is not installed dpkg: warning: ignoring request to remove python3-pooch which is not installed dpkg: warning: ignoring request to remove python3-pyparsing which is not installed dpkg: warning: ignoring request to remove python3-pytz which is not installed dpkg: warning: ignoring request to remove python3-reportlab which is not installed dpkg: warning: ignoring request to remove python3-requests which is not installed dpkg: warning: ignoring request to remove python3-rlpycairo which is not installed dpkg: warning: ignoring request to remove python3-scipy which is not installed dpkg: warning: ignoring request to remove python3-skia-pathops which is not installed dpkg: warning: ignoring request to remove python3-soupsieve which is not installed Purging configuration files for python3-sympy (1.14.0-3) ... dpkg: warning: ignoring request to remove python3-tables which is not installed dpkg: warning: ignoring request to remove python3-tables-lib which is not installed dpkg: warning: ignoring request to remove python3-tk which is not installed dpkg: warning: ignoring request to remove python3-tqdm which is not installed dpkg: warning: ignoring request to remove python3-typing-extensions which is not installed dpkg: warning: ignoring request to remove python3-ufolib2 which is not installed dpkg: warning: ignoring request to remove python3-uharfbuzz which is not installed dpkg: warning: ignoring request to remove python3-unicodedata2 which is not installed dpkg: warning: ignoring request to remove python3-urllib3 which is not installed dpkg: warning: ignoring request to remove python3-webencodings which is not installed dpkg: warning: ignoring request to remove python3-wheel which is not installed dpkg: warning: ignoring request to remove python3-yaml which is not installed dpkg: warning: ignoring request to remove python3-zopfli which is not installed dpkg: warning: ignoring request to remove python3.13 which is not installed dpkg: warning: ignoring request to remove python3.13-dev which is not installed Purging configuration files for python3.13-minimal (3.13.12-1) ... dpkg: warning: ignoring request to remove python3.13-tk which is not installed dpkg: warning: ignoring request to remove python3.14-tk which is not installed Purging configuration files for readline-common (8.3-4) ... dpkg: warning: ignoring request to remove rpcsvc-proto which is not installed Purging configuration files for sgml-base (1.31+nmu1) ... Purging configuration files for shared-mime-info (2.4-5+b3) ... dpkg: warning: ignoring request to remove sphinx-rtd-theme-common which is not installed dpkg: warning: ignoring request to remove sq which is not installed Purging configuration files for sse4.2-support (27+b1) ... dpkg: warning: ignoring request to remove unicode-data which is not installed Purging configuration files for w3c-sgml-lib (1.3-3) ... Purging configuration files for x11-common (1:7.7+26) ... Purging configuration files for xdg-user-dirs (0.20-1) ... dpkg: warning: ignoring request to remove xfonts-encodings which is not installed Purging configuration files for xfonts-utils (1:7.7+7) ... Purging configuration files for xml-core (0.20) ... dpkg: warning: ignoring request to remove xz-utils which is not installed dpkg: warning: ignoring request to remove zlib1g-dev which is not installed 3m31.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg', '--purge', 'alsa-topology-conf', 'alsa-ucm-conf', 'bbmap', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'build-essential', 'bzip2', 'ca-certificates', 'ca-certificates-java', 'cpp', 'cpp-15', 'cpp-15-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'default-jre-headless', 'dpkg-dev', 'fakeroot', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-font-awesome', 'fonts-lato', 'fonts-lyx', 'fonts-urw-base35', 'g++', 'g++-15', 'g++-15-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-15', 'gcc-15-base:amd64', 'gcc-15-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'hmmer', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'javascript-common', 'krb5-locales', 'libabsl20260107:amd64', 'libada-url0-3:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl', 'libalgorithm-merge-perl', 'libaom3:amd64', 'libapache-pom-java', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libatomic1:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libblosc2-7:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcares2:amd64', 'libcc1-0:amd64', 'libcom-err2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-io-java', 'libcommons-parent-java', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl4t64:amd64', 'libdav1d7:amd64', 'libdbus-1-3:amd64', 'libdeflate0:amd64', 'libdisplay-info3:amd64', 'libdivsufsort3:amd64', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libfakeroot:amd64', 'libffi8:amd64', 'libfile-fcntllock-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgav1-2:amd64', 'libgbm1:amd64', 'libgcc-15-dev:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error-l10n', 'libgpg-error0:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz-subset0:amd64', 'libharfbuzz0b:amd64', 'libhdf5-310:amd64', 'libhwasan0:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-common', 'libldap2:amd64', 'liblerc4:amd64', 'libllhttp9.4:amd64', 'libllvm21:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblog4j1.2-java', 'liblsan0:amd64', 'liblzo2-2:amd64', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libmpj-java', 'libncbi-vdb3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libnode137:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libopenjp2-7:amd64', 'libp11-kit0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.40:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'librav1e0.8:amd64', 'libreadline8t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsframe3:amd64', 'libsharpyuv0:amd64', 'libsimdjson33:amd64', 'libsimdutf33:amd64', 'libskia146:amd64', 'libsnappy1v5:amd64', 'libssh2-1t64:amd64', 'libstdc++-15-dev:amd64', 'libsvtav1enc4:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2-16:amd64', 'libxnvctrl0:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyuv0:amd64', 'libz3-4:amd64', 'libze1:amd64', 'libzopfli1', 'linux-libc-dev', 'make', 'manpages', 'manpages-dev', 'media-types', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'ncbi-blast+', 'ncbi-data', 'ncbi-vdb-data', 'netbase', 'node-acorn', 'node-balanced-match', 'node-brace-expansion', 'node-commander', 'node-corepack', 'node-debug', 'node-llhttp', 'node-lru-cache', 'node-mathjax-full', 'node-minimatch', 'node-mj-context-menu', 'node-ms', 'node-semver', 'node-speech-rule-engine', 'node-undici', 'node-xmldom', 'node-xtend', 'nodejs', 'nodejs-doc', 'numba-doc', 'ocl-icd-libopencl1:amd64', 'openjdk-25-jre-headless:amd64', 'openssl', 'patch', 'perl', 'perl-modules-5.40', 'pigz', 'prodigal', 'publicsuffix', 'python-babel-localedata', 'python-biopython-doc', 'python-matplotlib-data', 'python-odf-doc', 'python-odf-tools', 'python-tables-data', 'python3', 'python3-attr', 'python3-babel', 'python3-biopython', 'python3-bottleneck', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cpuinfo', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-defusedxml', 'python3-dev', 'python3-et-xmlfile', 'python3-fonttools', 'python3-freetype', 'python3-html5lib', 'python3-idna', 'python3-jinja2', 'python3-kiwisolver', 'python3-legacy-cgi', 'python3-llvmlite', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-numba', 'python3-numexpr', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-odf', 'python3-olefile', 'python3-openpyxl', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pip', 'python3-platformdirs', 'python3-pooch', 'python3-pyparsing', 'python3-pytz', 'python3-reportlab', 'python3-requests', 'python3-rlpycairo', 'python3-scipy', 'python3-skia-pathops', 'python3-soupsieve', 'python3-sympy', 'python3-tables', 'python3-tables-lib', 'python3-tk', 'python3-tqdm', 'python3-typing-extensions', 'python3-ufolib2', 'python3-uharfbuzz', 'python3-unicodedata2', 'python3-urllib3', 'python3-webencodings', 'python3-wheel', 'python3-yaml', 'python3-zopfli', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'python3.13-tk', 'python3.14-tk', 'readline-common', 'rpcsvc-proto', 'sgml-base', 'shared-mime-info', 'sphinx-rtd-theme-common', 'sq', 'sse4.2-support', 'unicode-data', 'w3c-sgml-lib', 'x11-common', 'xdg-user-dirs', 'xfonts-encodings', 'xfonts-utils', 'xml-core', 'xz-utils', 'zlib1g-dev:amd64'] 3m31.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg', '--purge', 'busco'] 3m31.3s DUMP: dpkg: warning: ignoring request to remove busco which is not installed 3m31.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg', '--purge', 'busco'] 3m31.3s INFO: Running scripts post_purge 3m31.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_purge_exceptions'] 3m31.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_purge_exceptions'] 3m31.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg', '--purge', '--pending'] 3m31.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg', '--purge', '--pending'] 3m31.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg', '--remove', '--pending'] 3m31.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg', '--remove', '--pending'] 3m31.4s INFO: Running scripts post_test 3m31.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_test_exceptions'] 3m31.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'tmp/scripts/post_test_exceptions'] 3m31.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 3m31.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 3m32.0s DEBUG: No broken symlinks as far as we can find. 3m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg-divert', '--list'] 3m32.0s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 3m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'dpkg-divert', '--list'] 3m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', 'clean'] 3m32.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm', 'apt-get', 'clean'] 3m32.1s DEBUG: Recording chroot state 3m32.7s INFO: PASS: Installation and purging test. 3m33.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/shm'] 3m33.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/shm'] 3m33.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/console'] 3m33.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/console'] 3m33.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/ptmx'] 3m33.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/ptmx'] 3m33.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/pts'] 3m33.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/dev/pts'] 3m33.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/proc'] 3m33.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm/proc'] 3m33.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 3m33.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp7vuc79gm'] 3m33.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp7vuc79gm 3m33.3s INFO: PASS: All tests. 3m33.3s INFO: piuparts run ends. ret=0 End: 2026-06-08 07:27:36 GMT