Start: 2026-10-20 03:36:46 GMT Package: unicycler Version: 0.5.1+dfsg-5 Installed-Size: 3222 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: python3:any, libc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4), default-jre, bcftools, bowtie2, miniasm, ncbi-blast+, pilon, racon, samtools, spades Recommends: unicycler-data Description: hybrid assembly pipeline for bacterial genomes Homepage: https://github.com/rrwick/Unicycler Commands: unicycler Description-md5: 0f68c8d94a4296faee946873e441867a Section: science Priority: optional Filename: pool/main/u/unicycler/unicycler_0.5.1+dfsg-5_amd64.deb Size: 904724 MD5sum: e5c16e472a8a31b3922f9275066a9b50 SHA256: 028c2914b767420ff4a08ff38a3d9f32192a5f571bdd770873a1b9daaef429f1 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d forky --no-upgrade-test --apt unicycler=0.5.1+dfsg-5 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202608291513~1.6.0-23-g1172a6e5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d forky --no-upgrade-test --apt unicycler=0.5.1+dfsg-5 0m0.0s INFO: Running on: Linux piu-slave-conova-01 6.12.113+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.113-1 (2026-10-15) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpyrj1k9to 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpyrj1k9to 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/pts'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/pts'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/ptmx'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/ptmx'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/16', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/console'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/16', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/console'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/shm'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/shm'] 0m0.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ forky main 0m0.3s DEBUG: Created policy-rc.d and chmodded it. 0m0.3s DEBUG: Created resolv.conf. 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpyrj1k9to/tmp/scripts/ 0m0.3s INFO: Running scripts post_chroot_unpack 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', 'update'] 0m2.4s DUMP: Get:1 http://deb.debian.org/debian forky InRelease [151 kB] Get:2 http://deb.debian.org/debian forky/main amd64 Packages [10.1 MB] Get:3 http://deb.debian.org/debian forky/main Translation-en [6651 kB] Fetched 16.9 MB in 1s (15.2 MB/s) Reading package lists... 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', 'update'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', '-yf', 'dist-upgrade'] 0m3.0s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', '-yf', 'dist-upgrade'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.5s DUMP: b86d3e78b7e094e5ba5a04a854c6568e - 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.5s INFO: Running scripts post_setup 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_dummy_users'] 0m4.1s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_dummy_users'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_forbid_home'] 0m4.1s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_forbid_home'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.2s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_minimize'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_minimize'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_zz_backports'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_setup_zz_backports'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', 'clean'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', 'clean'] 0m4.2s DEBUG: Recording chroot state 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.8s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.11 install ok installed findutils findutils 4.11.0-3 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-3 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b2 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-7 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-7 install ok installed libc6:amd64 libc6 2.43-7 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-3 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-3.1 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b1 install ok installed libselinux1:amd64 libselinux1 3.11-2.1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b1 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libssl3t64:amd64 libssl3t64 3.6.5-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 262-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 262-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.3-1 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed mount mount 2.42.4-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.5-1 install ok installed passwd passwd 1:4.20.3-1 install ok installed perl-base perl-base 5.42.3-1 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-6 install ok installed tzdata tzdata 2026e-1 install ok installed util-linux util-linux 2.42.4-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg-divert', '--list'] 0m4.8s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg-divert', '--list'] 0m4.8s INFO: Running scripts is_testable 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/is_testable_uninstallable'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/is_testable_uninstallable'] 0m4.8s INFO: apt-cache does not know about any of the requested packages 0m4.8s INFO: Running scripts pre_test 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_test_exceptions'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_test_exceptions'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_test_root_password'] 0m4.9s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_test_root_password'] 0m4.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 0m5.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 0m5.6s DEBUG: No broken symlinks as far as we can find. 0m5.6s INFO: Running scripts pre_install 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_database-server'] 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_database-server'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_exceptions'] 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_exceptions'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_extras'] 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_extras'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 0m5.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 0m6.1s DEBUG: No broken symlinks as far as we can find. 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-cache', 'policy'] 0m6.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian forky/main amd64 Packages release o=Debian,a=testing,n=forky,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-cache', 'policy'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-cache', 'policy', 'unicycler'] 0m7.0s DUMP: unicycler: Installed: (none) Candidate: 0.5.1+dfsg-5 Version table: 0.5.1+dfsg-5 500 500 http://deb.debian.org/debian forky/main amd64 Packages 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-cache', 'policy', 'unicycler'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', '-y', 'install', 'unicycler=0.5.1+dfsg-5'] 1m50.4s DUMP: Reading package lists... Building dependency tree... Solving dependencies... The following additional packages will be installed: adwaita-icon-theme alsa-topology-conf alsa-ucm-conf at-spi2-common at-spi2-core bamtools bcftools bowtie2 bubblewrap bwa ca-certificates ca-certificates-java dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jre default-jre-headless dmsetup fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-lyx fonts-urw-base35 gir1.2-girepository-3.0 gir1.2-glib-2.0 glycin-loaders glycin-thumbnailers gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme ibus-gtk3 isa-support isympy-common isympy3 java-common java-wrappers javascript-common junit4 krb5-locales libabsl20260526 libada-url0-3 libaom3 libapache-pom-java libapparmor1 libasound2-data libasound2t64 libatk-bridge2.0-0t64 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0t64 libatomic1 libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libavif16 libbamtools2.5.3 libblas3 libbpf1 libbrotli1 libcairo-gobject2 libcairo2 libcap2 libcares2 libcloudproviders0 libcolord2 libcom-err2 libcommons-beanutils-java libcommons-codec-java libcommons-collections3-java libcommons-collections4-java libcommons-compress-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-lang3-java libcommons-logging-java libcommons-parent-java libcryptsetup12 libcups2t64 libcurl4-gnutls libdatrie1 libdav1d7 libdbus-1-3 libdconf1 libde265-0 libdeflate0 libdevmapper1.02.1 libdisplay-info3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm2 libedit2 libedlib1 libelf1t64 libepoxy0 libexpat1 libezmorph-java libffi8 libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgav1-2 libgbm1 libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libgif7 libgirepository-2.0-0 libgl1 libgl1-mesa-dri libglib2.0-0t64 libglib2.0-data libglvnd0 libglx-mesa0 libglx0 libglycin-2-0 libgnutls30t64 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-bin libgtk-3-common libhamcrest-java libharfbuzz-subset0 libharfbuzz0b libhdr-histogram6 libheif-plugin-aomenc libheif-plugin-dav1d libheif-plugin-libde265 libheif-plugin-x265 libheif1 libhts3t64 libhtscodecs2 libhtsjdk-java libhwy1t64 libibus-1.0-5 libice6 libicu78 libidn2-0 libimagequant0 libjaxen-java libjbig0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc libjson-c5 libjson-java libjsoncpp26 libjxl0.11 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-common libldap2 liblerc4 libllhttp9.4 libllvm21 liblmdb0 liblog4j1.2-java libmbedcrypto16 libmbedtls21 libmbedx509-7 libncbi-ngs3 libncbi-vdb3 libncurses6 libncursesw6 libnghttp2-14 libnghttp3-9 libngs-java libngs-jni libngtcp2-16 libngtcp2-crypto-gnutls8 libnlopt1 libnode137 libnspr4 libnss-systemd libnss3 libnuma1 libopenjp2-7 libp11-kit0 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libperl5.42 libpixman-1-0 libpng16-16t64 libproc2-1 libpsl5t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libqhull-r8.0 libraqm0 librav1e0.8 libreadline8t64 librhino-java librsvg2-2 librsvg2-common libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libsharpyuv0 libsimdjson33 libsimdutf35 libskia146 libslf4j-java libsm6 libsnappy-java libsnappy-jni libsnappy1v5 libspoa7.0.0 libsqlite3-0 libssh2-1t64 libssw0 libsvtav1enc4 libsystemd-shared libtasn1-6 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libtss2-esys-3.0.2-0t64 libtss2-mu-4.0.1-0t64 libtss2-rc0t64 libtss2-sys1t64 libtss2-tcti-cmd0t64 libtss2-tcti-device0t64 libtss2-tcti-mssim0t64 libtss2-tcti-swtpm0t64 libunistring5 libuv1t64 libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-xcb1 libx265-216 libxau6 libxaw7 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxkbfile1 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2-16 libxmu6 libxmuu1 libxom-java libxpm4 libxrandr2 libxrender1 libxres1 libxshmfence1 libxslt1.1 libxss1 libxt6t64 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 libyaml-0-2 libyuv0 libz3-4 libzopfli1 linux-sysctl-defaults luit media-types mesa-libgallium mesa-vulkan-drivers miniasm minimap ncbi-blast+ ncbi-data ncbi-vdb-data netbase node-acorn node-balanced-match node-brace-expansion node-commander node-corepack node-debug node-llhttp node-lru-cache node-mathjax-full node-minimatch node-mj-context-menu node-ms node-semver node-speech-rule-engine node-undici node-xmldom node-xtend nodejs nodejs-doc openjdk-25-jre openjdk-25-jre-headless openssl pci.ids perl perl-modules-5.42 pilon procps psmisc publicsuffix python-biopython-doc python-matplotlib-data python3 python3-argcomplete python3-argh python3-attr python3-biopython python3-brotli python3-bs4 python3-cairo python3-charset-normalizer python3-contourpy python3-cssselect python3-cycler python3-dateutil python3-fonttools python3-freetype python3-gffutils python3-gi python3-html5lib python3-iniconfig python3-joblib python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib python3-minimal python3-mpmath python3-munkres python3-numpy python3-numpy-dev python3-olefile python3-packaging python3-pil python3-pil.imagetk python3-pluggy python3-psutil python3-pybedtools python3-pyfaidx python3-pygments python3-pyparsing python3-pysam python3-pytest python3-reportlab python3-rlpycairo python3-skia-pathops python3-soupsieve python3-sympy python3-tk python3-typing-extensions python3-ufolib2 python3-uharfbuzz python3-webencodings python3-yaml python3-zopfli python3.14 python3.14-minimal python3.14-tk racon rampler readline-common samtools scala-library sgml-base shared-mime-info spades sse4.2-support systemd systemd-cryptsetup systemd-sysv systemd-timesyncd systemd-tpm systemd-userdbd tpm-udev unicode-data unicycler-data unzip user-session-migration w3c-sgml-lib x11-common x11-utils xdg-user-dirs xfonts-encodings xfonts-utils xkb-data xml-core Suggested packages: adwaita-icon-theme-legacy texlive-latex-recommended bowtie2-examples fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre apache2 | lighttpd | httpd alsa-utils libasound2-plugins colord libasm-java libxz-java libcommons-lang-java-doc libavalon-framework-java libexcalibur-logkit-java cups-common rng-tools gdbm-l10n low-memory-monitor gnutls-bin gpm krb5-doc krb5-user gvfs libheif-plugin-ffmpegdec libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e libheif-plugin-svtenc picard-tools libdom4j-java libjdom1-java liblcms2-utils liblog4j1.2-java-doc libmail-java libngs-java-doc pcscd sensible-utils rhino librsvg2-bin libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal libsasl2-modules-ldap libsasl2-modules-otp libsasl2-modules-sql lm-sensors libarchive13t64 libcurl4t64 libdw1t64 libfdisk1 libfido2-1 libmicrohttpd12t64 libpwquality1 libqrencode4 tcl8.6 tk8.6 libxerces2-java-doc libxml-commons-resolver1.1-java-doc libxom-java-doc libjs-mathjax-doc npm libnss-mdns fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make libtap-harness-archive-perl python3-doc python3-venv python-attr-doc clustalo clustalw dialign dssp emboss fasttree mafft muscle3 phylip phyml prank probcons python3-mysqldb python3-mmtf python3-rdflib python3-psycopg2 python3-scipy python3-igraph raxml t-coffee wise python-charset-normalizer-doc python-cycler-doc python3-genshi python-joblib-doc python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 gir1.2-gtk-4.0 inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt6 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc gfortran python-numpy-doc python3-dev python-pil-doc python-pybedtools-doc python-pygments-doc ttf-bitstream-vera python-pyparsing-doc pdf-viewer python3-egenix-mxtexttools python-reportlab-doc rl-accel rl-renderpm python-sympy-doc texlive-fonts-extra blt tix python-typing-extensions-doc python3.14-venv python3.14-doc binutils binfmt-support readline-doc cwltool sgml-base-doc systemd-container systemd-homed systemd-imds systemd-boot systemd-report systemd-resolved systemd-repart polkitd zip mesa-utils debhelper Recommended packages: python3-biopython The following NEW packages will be installed: adwaita-icon-theme alsa-topology-conf alsa-ucm-conf at-spi2-common at-spi2-core bamtools bcftools bowtie2 bubblewrap bwa ca-certificates ca-certificates-java dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jre default-jre-headless dmsetup fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-lyx fonts-urw-base35 gir1.2-girepository-3.0 gir1.2-glib-2.0 glycin-loaders glycin-thumbnailers gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme ibus-gtk3 isa-support isympy-common isympy3 java-common java-wrappers javascript-common junit4 krb5-locales libabsl20260526 libada-url0-3 libaom3 libapache-pom-java libapparmor1 libasound2-data libasound2t64 libatk-bridge2.0-0t64 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0t64 libatomic1 libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libavif16 libbamtools2.5.3 libblas3 libbpf1 libbrotli1 libcairo-gobject2 libcairo2 libcap2 libcares2 libcloudproviders0 libcolord2 libcom-err2 libcommons-beanutils-java libcommons-codec-java libcommons-collections3-java libcommons-collections4-java libcommons-compress-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-lang3-java libcommons-logging-java libcommons-parent-java libcryptsetup12 libcups2t64 libcurl4-gnutls libdatrie1 libdav1d7 libdbus-1-3 libdconf1 libde265-0 libdeflate0 libdevmapper1.02.1 libdisplay-info3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm2 libedit2 libedlib1 libelf1t64 libepoxy0 libexpat1 libezmorph-java libffi8 libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgav1-2 libgbm1 libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libgif7 libgirepository-2.0-0 libgl1 libgl1-mesa-dri libglib2.0-0t64 libglib2.0-data libglvnd0 libglx-mesa0 libglx0 libglycin-2-0 libgnutls30t64 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-bin libgtk-3-common libhamcrest-java libharfbuzz-subset0 libharfbuzz0b libhdr-histogram6 libheif-plugin-aomenc libheif-plugin-dav1d libheif-plugin-libde265 libheif-plugin-x265 libheif1 libhts3t64 libhtscodecs2 libhtsjdk-java libhwy1t64 libibus-1.0-5 libice6 libicu78 libidn2-0 libimagequant0 libjaxen-java libjbig0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc libjson-c5 libjson-java libjsoncpp26 libjxl0.11 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-common libldap2 liblerc4 libllhttp9.4 libllvm21 liblmdb0 liblog4j1.2-java libmbedcrypto16 libmbedtls21 libmbedx509-7 libncbi-ngs3 libncbi-vdb3 libncurses6 libncursesw6 libnghttp2-14 libnghttp3-9 libngs-java libngs-jni libngtcp2-16 libngtcp2-crypto-gnutls8 libnlopt1 libnode137 libnspr4 libnss-systemd libnss3 libnuma1 libopenjp2-7 libp11-kit0 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libperl5.42 libpixman-1-0 libpng16-16t64 libproc2-1 libpsl5t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libqhull-r8.0 libraqm0 librav1e0.8 libreadline8t64 librhino-java librsvg2-2 librsvg2-common libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libsharpyuv0 libsimdjson33 libsimdutf35 libskia146 libslf4j-java libsm6 libsnappy-java libsnappy-jni libsnappy1v5 libspoa7.0.0 libsqlite3-0 libssh2-1t64 libssw0 libsvtav1enc4 libsystemd-shared libtasn1-6 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libtss2-esys-3.0.2-0t64 libtss2-mu-4.0.1-0t64 libtss2-rc0t64 libtss2-sys1t64 libtss2-tcti-cmd0t64 libtss2-tcti-device0t64 libtss2-tcti-mssim0t64 libtss2-tcti-swtpm0t64 libunistring5 libuv1t64 libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-xcb1 libx265-216 libxau6 libxaw7 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxkbfile1 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2-16 libxmu6 libxmuu1 libxom-java libxpm4 libxrandr2 libxrender1 libxres1 libxshmfence1 libxslt1.1 libxss1 libxt6t64 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 libyaml-0-2 libyuv0 libz3-4 libzopfli1 linux-sysctl-defaults luit media-types mesa-libgallium mesa-vulkan-drivers miniasm minimap ncbi-blast+ ncbi-data ncbi-vdb-data netbase node-acorn node-balanced-match node-brace-expansion node-commander node-corepack node-debug node-llhttp node-lru-cache node-mathjax-full node-minimatch node-mj-context-menu node-ms node-semver node-speech-rule-engine node-undici node-xmldom node-xtend nodejs nodejs-doc openjdk-25-jre openjdk-25-jre-headless openssl pci.ids perl perl-modules-5.42 pilon procps psmisc publicsuffix python-biopython-doc python-matplotlib-data python3 python3-argcomplete python3-argh python3-attr python3-biopython python3-brotli python3-bs4 python3-cairo python3-charset-normalizer python3-contourpy python3-cssselect python3-cycler python3-dateutil python3-fonttools python3-freetype python3-gffutils python3-gi python3-html5lib python3-iniconfig python3-joblib python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib python3-minimal python3-mpmath python3-munkres python3-numpy python3-numpy-dev python3-olefile python3-packaging python3-pil python3-pil.imagetk python3-pluggy python3-psutil python3-pybedtools python3-pyfaidx python3-pygments python3-pyparsing python3-pysam python3-pytest python3-reportlab python3-rlpycairo python3-skia-pathops python3-soupsieve python3-sympy python3-tk python3-typing-extensions python3-ufolib2 python3-uharfbuzz python3-webencodings python3-yaml python3-zopfli python3.14 python3.14-minimal python3.14-tk racon rampler readline-common samtools scala-library sgml-base shared-mime-info spades sse4.2-support systemd systemd-cryptsetup systemd-sysv systemd-timesyncd systemd-tpm systemd-userdbd tpm-udev unicode-data unicycler unicycler-data unzip user-session-migration w3c-sgml-lib x11-common x11-utils xdg-user-dirs xfonts-encodings xfonts-utils xkb-data xml-core 0 upgraded, 442 newly installed, 0 to remove and 0 not upgraded. Need to get 440 MB of archives. After this operation, 1728 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian forky/main amd64 libsystemd-shared amd64 262-1 [2789 kB] Get:2 http://deb.debian.org/debian forky/main amd64 systemd amd64 262-1 [3477 kB] Get:3 http://deb.debian.org/debian forky/main amd64 systemd-sysv amd64 262-1 [41.6 kB] Get:4 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.9.0-1 [133 kB] Get:5 http://deb.debian.org/debian forky/main amd64 libpython3.14-minimal amd64 3.14.8-1 [902 kB] Get:6 http://deb.debian.org/debian forky/main amd64 python3.14-minimal amd64 3.14.8-1 [2715 kB] Get:7 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.14.7-3 [25.3 kB] Get:8 http://deb.debian.org/debian forky/main amd64 media-types all 14.0.0 [30.8 kB] Get:9 http://deb.debian.org/debian forky/main amd64 netbase all 6.6 [10.3 kB] Get:10 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.8.0-2 [32.5 kB] Get:11 http://deb.debian.org/debian forky/main amd64 libncursesw6 amd64 6.6+20260608-2 [137 kB] Get:12 http://deb.debian.org/debian forky/main amd64 readline-common all 8.3-4 [74.8 kB] Get:13 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.3-4 [181 kB] Get:14 http://deb.debian.org/debian forky/main amd64 libsqlite3-0 amd64 3.53.4-2 [974 kB] Get:15 http://deb.debian.org/debian forky/main amd64 libpython3.14-stdlib amd64 3.14.8-1 [2367 kB] Get:16 http://deb.debian.org/debian forky/main amd64 python3.14 amd64 3.14.8-1 [874 kB] Get:17 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.14.7-3 [8252 B] Get:18 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.14.7-3 [26.0 kB] Get:19 http://deb.debian.org/debian forky/main amd64 python3-numpy-dev amd64 1:2.4.6+ds-4+b1 [138 kB] Get:20 http://deb.debian.org/debian forky/main amd64 libblas3 amd64 3.12.1-8 [206 kB] Get:21 http://deb.debian.org/debian forky/main amd64 libgfortran5 amd64 16.2.0-3 [879 kB] Get:22 http://deb.debian.org/debian forky/main amd64 liblapack3 amd64 3.12.1-8 [2548 kB] Get:23 http://deb.debian.org/debian forky/main amd64 python3-numpy amd64 1:2.4.6+ds-4+b1 [5140 kB] Get:24 http://deb.debian.org/debian forky/main amd64 isa-support amd64 34 [14.0 kB] Get:25 http://deb.debian.org/debian forky/main amd64 sse4.2-support amd64 34 [3720 B] Get:26 http://deb.debian.org/debian forky/main amd64 linux-sysctl-defaults all 4.17 [5248 B] Get:27 http://deb.debian.org/debian forky/main amd64 libproc2-1 amd64 2:4.0.7-1 [73.0 kB] Get:28 http://deb.debian.org/debian forky/main amd64 procps amd64 2:4.0.7-1 [989 kB] Get:29 http://deb.debian.org/debian forky/main amd64 openssl amd64 3.6.5-1 [1554 kB] Get:30 http://deb.debian.org/debian forky/main amd64 ca-certificates all 20260816 [134 kB] Get:31 http://deb.debian.org/debian forky/main amd64 libdbus-1-3 amd64 1.16.2-8 [184 kB] Get:32 http://deb.debian.org/debian forky/main amd64 dbus-bin amd64 1.16.2-8 [76.8 kB] Get:33 http://deb.debian.org/debian forky/main amd64 dbus-session-bus-common all 1.16.2-8 [49.2 kB] Get:34 http://deb.debian.org/debian forky/main amd64 libapparmor1 amd64 4.1.8-3 [38.8 kB] Get:35 http://deb.debian.org/debian forky/main amd64 dbus-daemon amd64 1.16.2-8 [163 kB] Get:36 http://deb.debian.org/debian forky/main amd64 dbus-system-bus-common all 1.16.2-8 [50.2 kB] Get:37 http://deb.debian.org/debian forky/main amd64 dbus amd64 1.16.2-8 [69.0 kB] Get:38 http://deb.debian.org/debian forky/main amd64 krb5-locales all 1.22.1-3 [99.0 kB] Get:39 http://deb.debian.org/debian forky/main amd64 libnss-systemd amd64 262-1 [246 kB] Get:40 http://deb.debian.org/debian forky/main amd64 libpam-systemd amd64 262-1 [346 kB] Get:41 http://deb.debian.org/debian forky/main amd64 perl-modules-5.42 all 5.42.3-1 [3213 kB] Get:42 http://deb.debian.org/debian forky/main amd64 libgdbm6t64 amd64 1.26-1+b2 [77.7 kB] Get:43 http://deb.debian.org/debian forky/main amd64 libgdbm-compat4t64 amd64 1.26-1+b2 [52.0 kB] Get:44 http://deb.debian.org/debian forky/main amd64 libperl5.42 amd64 5.42.3-1 [4272 kB] Get:45 http://deb.debian.org/debian forky/main amd64 perl amd64 5.42.3-1 [266 kB] Get:46 http://deb.debian.org/debian forky/main amd64 systemd-timesyncd amd64 262-1 [73.8 kB] Get:47 http://deb.debian.org/debian forky/main amd64 libcap2 amd64 1:2.78-1+b1 [28.8 kB] Get:48 http://deb.debian.org/debian forky/main amd64 bubblewrap amd64 0.13.0-1 [55.7 kB] Get:49 http://deb.debian.org/debian forky/main amd64 libbrotli1 amd64 1.2.0-4+b1 [312 kB] Get:50 http://deb.debian.org/debian forky/main amd64 libpng16-16t64 amd64 1.6.59-1 [293 kB] Get:51 http://deb.debian.org/debian forky/main amd64 libfreetype6 amd64 2.14.3+dfsg-3 [510 kB] Get:52 http://deb.debian.org/debian forky/main amd64 fonts-dejavu-mono all 2.37-9 [488 kB] Get:53 http://deb.debian.org/debian forky/main amd64 fonts-dejavu-core all 2.37-9 [840 kB] Get:54 http://deb.debian.org/debian forky/main amd64 libfontenc1 amd64 1:1.1.8-1+b3 [23.4 kB] Get:55 http://deb.debian.org/debian forky/main amd64 x11-common all 1:7.7+26 [217 kB] Get:56 http://deb.debian.org/debian forky/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get:57 http://deb.debian.org/debian forky/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get:58 http://deb.debian.org/debian forky/main amd64 fonts-urw-base35 all 20200910-9 [10.8 MB] Get:59 http://deb.debian.org/debian forky/main amd64 fontconfig-config amd64 2.17.1-5 [56.1 kB] Get:60 http://deb.debian.org/debian forky/main amd64 libfontconfig1 amd64 2.17.1-5 [132 kB] Get:61 http://deb.debian.org/debian forky/main amd64 libpixman-1-0 amd64 0.46.4-1+b2 [259 kB] Get:62 http://deb.debian.org/debian forky/main amd64 libxau6 amd64 1:1.0.11-1+b2 [20.7 kB] Get:63 http://deb.debian.org/debian forky/main amd64 libxdmcp6 amd64 1:1.1.5-2+b1 [28.2 kB] Get:64 http://deb.debian.org/debian forky/main amd64 libxcb1 amd64 1.17.0-2+b2 [144 kB] Get:65 http://deb.debian.org/debian forky/main amd64 libx11-data all 2:1.8.13-1 [346 kB] Get:66 http://deb.debian.org/debian forky/main amd64 libx11-6 amd64 2:1.8.13-1 [829 kB] Get:67 http://deb.debian.org/debian forky/main amd64 libxcb-render0 amd64 1.17.0-2+b2 [115 kB] Get:68 http://deb.debian.org/debian forky/main amd64 libxcb-shm0 amd64 1.17.0-2+b2 [105 kB] Get:69 http://deb.debian.org/debian forky/main amd64 libxext6 amd64 2:1.3.4-1+b4 [50.7 kB] Get:70 http://deb.debian.org/debian forky/main amd64 libxrender1 amd64 1:0.9.12-1+b2 [27.7 kB] Get:71 http://deb.debian.org/debian forky/main amd64 libcairo2 amd64 1.18.4-3+b1 [543 kB] Get:72 http://deb.debian.org/debian forky/main amd64 libatomic1 amd64 16.2.0-3 [10.4 kB] Get:73 http://deb.debian.org/debian forky/main amd64 libglib2.0-0t64 amd64 2.90.1-2 [1620 kB] Get:74 http://deb.debian.org/debian forky/main amd64 libsharpyuv0 amd64 1.6.0-0.1 [116 kB] Get:75 http://deb.debian.org/debian forky/main amd64 libde265-0 amd64 1.1.3-1+b1 [219 kB] Get:76 http://deb.debian.org/debian forky/main amd64 libheif-plugin-libde265 amd64 1.23.6-2 [19.6 kB] Get:77 http://deb.debian.org/debian forky/main amd64 libdav1d7 amd64 1.5.4-1 [583 kB] Get:78 http://deb.debian.org/debian forky/main amd64 libheif-plugin-dav1d amd64 1.23.6-2 [22.1 kB] Get:79 http://deb.debian.org/debian forky/main amd64 libheif1 amd64 1.23.6-2 [885 kB] Get:80 http://deb.debian.org/debian forky/main amd64 libhwy1t64 amd64 1.3.0-5.1 [694 kB] Get:81 http://deb.debian.org/debian forky/main amd64 liblcms2-2 amd64 2.19.1-1 [164 kB] Get:82 http://deb.debian.org/debian forky/main amd64 libjxl0.11 amd64 0.11.2-5.1 [1273 kB] Get:83 http://deb.debian.org/debian forky/main amd64 libcairo-gobject2 amd64 1.18.4-3+b1 [129 kB] Get:84 http://deb.debian.org/debian forky/main amd64 fontconfig amd64 2.17.1-5 [191 kB] Get:85 http://deb.debian.org/debian forky/main amd64 libfribidi0 amd64 1.0.16-5+b1 [26.2 kB] Get:86 http://deb.debian.org/debian forky/main amd64 libgraphite2-3 amd64 1.3.15-2 [75.8 kB] Get:87 http://deb.debian.org/debian forky/main amd64 libharfbuzz0b amd64 12.3.2-2+b2 [513 kB] Get:88 http://deb.debian.org/debian forky/main amd64 libthai-data all 0.1.30-3 [172 kB] Get:89 http://deb.debian.org/debian forky/main amd64 libdatrie1 amd64 0.2.14-2 [39.1 kB] Get:90 http://deb.debian.org/debian forky/main amd64 libthai0 amd64 0.1.30-3 [51.7 kB] Get:91 http://deb.debian.org/debian forky/main amd64 libpango-1.0-0 amd64 1.58.2-1 [233 kB] Get:92 http://deb.debian.org/debian forky/main amd64 libpangoft2-1.0-0 amd64 1.58.2-1 [56.0 kB] Get:93 http://deb.debian.org/debian forky/main amd64 libpangocairo-1.0-0 amd64 1.58.2-1 [35.3 kB] Get:94 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.15.4+dfsg-1 [683 kB] Get:95 http://deb.debian.org/debian forky/main amd64 librsvg2-2 amd64 2.63.2+dfsg-1 [1836 kB] Get:96 http://deb.debian.org/debian forky/main amd64 glycin-loaders amd64 2.2.2+ds-1 [2979 kB] Get:97 http://deb.debian.org/debian forky/main amd64 libglycin-2-0 amd64 2.2.2+ds-1 [1610 kB] Get:98 http://deb.debian.org/debian forky/main amd64 glycin-thumbnailers amd64 2.2.2+ds-1 [207 kB] Get:99 http://deb.debian.org/debian forky/main amd64 libgdk-pixbuf2.0-common all 2.44.8+dfsg-1 [316 kB] Get:100 http://deb.debian.org/debian forky/main amd64 shared-mime-info amd64 2.4-5+b3 [758 kB] Get:101 http://deb.debian.org/debian forky/main amd64 libgdk-pixbuf-2.0-0 amd64 2.44.8+dfsg-1 [103 kB] Get:102 http://deb.debian.org/debian forky/main amd64 gtk-update-icon-cache amd64 4.24.1+ds-1 [41.9 kB] Get:103 http://deb.debian.org/debian forky/main amd64 hicolor-icon-theme all 0.18-2 [11.8 kB] Get:104 http://deb.debian.org/debian forky/main amd64 adwaita-icon-theme all 51.0-1 [493 kB] Get:105 http://deb.debian.org/debian forky/main amd64 alsa-topology-conf all 1.2.5.1-3 [15.3 kB] Get:106 http://deb.debian.org/debian forky/main amd64 libasound2-data all 1.2.16.1-2 [19.4 kB] Get:107 http://deb.debian.org/debian forky/main amd64 libasound2t64 amd64 1.2.16.1-2 [417 kB] Get:108 http://deb.debian.org/debian forky/main amd64 alsa-ucm-conf all 1.2.16.1-1 [108 kB] Get:109 http://deb.debian.org/debian forky/main amd64 at-spi2-common all 2.62.1-1 [171 kB] Get:110 http://deb.debian.org/debian forky/main amd64 libxi6 amd64 2:1.8.3-1 [86.4 kB] Get:111 http://deb.debian.org/debian forky/main amd64 libxres1 amd64 2:1.2.1-2 [17.9 kB] Get:112 http://deb.debian.org/debian forky/main amd64 libatspi2.0-0t64 amd64 2.62.1-1 [86.9 kB] Get:113 http://deb.debian.org/debian forky/main amd64 libxtst6 amd64 2:1.2.5-1+b2 [26.2 kB] Get:114 http://deb.debian.org/debian forky/main amd64 dbus-user-session amd64 1.16.2-8 [49.3 kB] Get:115 http://deb.debian.org/debian forky/main amd64 libdconf1 amd64 51.0-2 [45.3 kB] Get:116 http://deb.debian.org/debian forky/main amd64 dconf-service amd64 51.0-2 [36.3 kB] Get:117 http://deb.debian.org/debian forky/main amd64 dconf-gsettings-backend amd64 51.0-2 [31.3 kB] Get:118 http://deb.debian.org/debian forky/main amd64 user-session-migration amd64 0.5.2 [9856 B] Get:119 http://deb.debian.org/debian forky/main amd64 gsettings-desktop-schemas all 51.0-2 [846 kB] Get:120 http://deb.debian.org/debian forky/main amd64 at-spi2-core amd64 2.62.1-1 [64.1 kB] Get:121 http://deb.debian.org/debian forky/main amd64 libbamtools2.5.3 amd64 2.5.3+dfsg-2 [161 kB] Get:122 http://deb.debian.org/debian forky/main amd64 libjsoncpp26 amd64 1.9.8-2 [87.5 kB] Get:123 http://deb.debian.org/debian forky/main amd64 bamtools amd64 2.5.3+dfsg-2 [198 kB] Get:124 http://deb.debian.org/debian forky/main amd64 libnghttp3-9 amd64 1.17.0-1 [68.1 kB] Get:125 http://deb.debian.org/debian forky/main amd64 libngtcp2-16 amd64 1.24.0-1 [145 kB] Get:126 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.4.2-1 [480 kB] Get:127 http://deb.debian.org/debian forky/main amd64 libidn2-0 amd64 2.3.8-5 [109 kB] Get:128 http://deb.debian.org/debian forky/main amd64 libp11-kit0 amd64 0.26.5-1 [482 kB] Get:129 http://deb.debian.org/debian forky/main amd64 libtasn1-6 amd64 4.21.0-2+b1 [49.3 kB] Get:130 http://deb.debian.org/debian forky/main amd64 libgnutls30t64 amd64 3.8.13-1 [1546 kB] Get:131 http://deb.debian.org/debian forky/main amd64 libkrb5support0 amd64 1.22.1-3 [31.1 kB] Get:132 http://deb.debian.org/debian forky/main amd64 libcom-err2 amd64 1.47.4-1+b2 [19.5 kB] Get:133 http://deb.debian.org/debian forky/main amd64 libk5crypto3 amd64 1.22.1-3 [79.0 kB] Get:134 http://deb.debian.org/debian forky/main amd64 libkeyutils1 amd64 1.6.3-6+b2 [9348 B] Get:135 http://deb.debian.org/debian forky/main amd64 libkrb5-3 amd64 1.22.1-3 [335 kB] Get:136 http://deb.debian.org/debian forky/main amd64 libgssapi-krb5-2 amd64 1.22.1-3 [137 kB] Get:137 http://deb.debian.org/debian forky/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-12 [18.4 kB] Get:138 http://deb.debian.org/debian forky/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-12 [59.4 kB] Get:139 http://deb.debian.org/debian forky/main amd64 libldap2 amd64 2.6.14+dfsg-2 [200 kB] Get:140 http://deb.debian.org/debian forky/main amd64 libnghttp2-14 amd64 1.70.0-1 [92.7 kB] Get:141 http://deb.debian.org/debian forky/main amd64 libngtcp2-crypto-gnutls8 amd64 1.24.0-1 [23.9 kB] Get:142 http://deb.debian.org/debian forky/main amd64 libpsl5t64 amd64 0.23.3-1 [61.7 kB] Get:143 http://deb.debian.org/debian forky/main amd64 libssh2-1t64 amd64 1.11.1-6 [253 kB] Get:144 http://deb.debian.org/debian forky/main amd64 libcurl4-gnutls amd64 8.22.0-1 [457 kB] Get:145 http://deb.debian.org/debian forky/main amd64 libdeflate0 amd64 1.25-1 [48.0 kB] Get:146 http://deb.debian.org/debian forky/main amd64 libhtscodecs2 amd64 1.6.7-1 [102 kB] Get:147 http://deb.debian.org/debian forky/main amd64 libhts3t64 amd64 1.24-3 [506 kB] Get:148 http://deb.debian.org/debian forky/main amd64 bcftools amd64 1.24-1 [881 kB] Get:149 http://deb.debian.org/debian forky/main amd64 bowtie2 amd64 2.5.5-1+b1 [2463 kB] Get:150 http://deb.debian.org/debian forky/main amd64 bwa amd64 0.7.19-1 [213 kB] Get:151 http://deb.debian.org/debian forky/main amd64 ca-certificates-java all 20260311 [11.2 kB] Get:152 http://deb.debian.org/debian forky/main amd64 java-common all 0.77 [6620 B] Get:153 http://deb.debian.org/debian forky/main amd64 libjpeg62-turbo amd64 1:3.1.3-4 [213 kB] Get:154 http://deb.debian.org/debian forky/main amd64 libnspr4 amd64 2:4.40-1 [116 kB] Get:155 http://deb.debian.org/debian forky/main amd64 libnss3 amd64 2:3.131-1 [1549 kB] Get:156 http://deb.debian.org/debian forky/main amd64 libpcsclite1 amd64 2.5.2-1 [56.7 kB] Get:157 http://deb.debian.org/debian forky/main amd64 openjdk-25-jre-headless amd64 25.0.5~7ea-1 [54.0 MB] Get:158 http://deb.debian.org/debian forky/main amd64 default-jre-headless amd64 2:1.25-77 [3012 B] Get:159 http://deb.debian.org/debian forky/main amd64 libgtk-3-common all 3.24.52-2 [4929 kB] Get:160 http://deb.debian.org/debian forky/main amd64 libatk1.0-0t64 amd64 2.62.1-1 [51.7 kB] Get:161 http://deb.debian.org/debian forky/main amd64 libatk-bridge2.0-0t64 amd64 2.62.1-1 [69.2 kB] Get:162 http://deb.debian.org/debian forky/main amd64 libcloudproviders0 amd64 0.4.1-1 [29.6 kB] Get:163 http://deb.debian.org/debian forky/main amd64 libcolord2 amd64 1.4.8-3 [141 kB] Get:164 http://deb.debian.org/debian forky/main amd64 libavahi-common-data amd64 0.8-18 [113 kB] Get:165 http://deb.debian.org/debian forky/main amd64 libavahi-common3 amd64 0.8-18 [45.2 kB] Get:166 http://deb.debian.org/debian forky/main amd64 libavahi-client3 amd64 0.8-18 [49.2 kB] Get:167 http://deb.debian.org/debian forky/main amd64 libcups2t64 amd64 2.4.18-1 [252 kB] Get:168 http://deb.debian.org/debian forky/main amd64 libepoxy0 amd64 1.5.10-2+b2 [199 kB] Get:169 http://deb.debian.org/debian forky/main amd64 libwayland-client0 amd64 1.26.0-1 [29.4 kB] Get:170 http://deb.debian.org/debian forky/main amd64 libwayland-cursor0 amd64 1.26.0-1 [11.8 kB] Get:171 http://deb.debian.org/debian forky/main amd64 libwayland-egl1 amd64 1.26.0-1 [5688 B] Get:172 http://deb.debian.org/debian forky/main amd64 libxcomposite1 amd64 1:0.4.6-1+b2 [16.6 kB] Get:173 http://deb.debian.org/debian forky/main amd64 libxfixes3 amd64 1:6.0.0-2+b5 [20.3 kB] Get:174 http://deb.debian.org/debian forky/main amd64 libxcursor1 amd64 1:1.2.3-1+b2 [40.3 kB] Get:175 http://deb.debian.org/debian forky/main amd64 libxdamage1 amd64 1:1.1.7-1+b1 [16.3 kB] Get:176 http://deb.debian.org/debian forky/main amd64 libxinerama1 amd64 2:1.1.4-3+b5 [16.0 kB] Get:177 http://deb.debian.org/debian forky/main amd64 xkb-data all 2.48-1 [841 kB] Get:178 http://deb.debian.org/debian forky/main amd64 libxkbcommon0 amd64 1.13.1-1 [148 kB] Get:179 http://deb.debian.org/debian forky/main amd64 libxrandr2 amd64 2:1.5.4-1+b4 [36.5 kB] Get:180 http://deb.debian.org/debian forky/main amd64 libgtk-3-0t64 amd64 3.24.52-2 [3067 kB] Get:181 http://deb.debian.org/debian forky/main amd64 libglvnd0 amd64 1.7.0-3+b1 [54.3 kB] Get:182 http://deb.debian.org/debian forky/main amd64 libdrm-common all 2.4.134-3 [7860 B] Get:183 http://deb.debian.org/debian forky/main amd64 libdrm2 amd64 2.4.134-3 [38.5 kB] Get:184 http://deb.debian.org/debian forky/main amd64 libdrm-amdgpu1 amd64 2.4.134-3 [23.3 kB] Get:185 http://deb.debian.org/debian forky/main amd64 pci.ids all 0.0~2026.09.23-1 [287 kB] Get:186 http://deb.debian.org/debian forky/main amd64 libpciaccess0 amd64 0.19-2 [18.5 kB] Get:187 http://deb.debian.org/debian forky/main amd64 libdrm-intel1 amd64 2.4.134-3 [64.2 kB] Get:188 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.196-1 [61.2 kB] Get:189 http://deb.debian.org/debian forky/main amd64 libedit2 amd64 3.1-20260512-1 [93.6 kB] Get:190 http://deb.debian.org/debian forky/main amd64 libz3-4 amd64 4.13.3-1.1 [8644 kB] Get:191 http://deb.debian.org/debian forky/main amd64 libllvm21 amd64 1:21.1.8-13 [28.3 MB] Get:192 http://deb.debian.org/debian forky/main amd64 libsensors-config all 1:3.6.2-2 [16.2 kB] Get:193 http://deb.debian.org/debian forky/main amd64 libsensors5 amd64 1:3.6.2-2+b2 [37.2 kB] Get:194 http://deb.debian.org/debian forky/main amd64 libx11-xcb1 amd64 2:1.8.13-1 [250 kB] Get:195 http://deb.debian.org/debian forky/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b2 [107 kB] Get:196 http://deb.debian.org/debian forky/main amd64 libxcb-present0 amd64 1.17.0-2+b2 [106 kB] Get:197 http://deb.debian.org/debian forky/main amd64 libxcb-randr0 amd64 1.17.0-2+b2 [117 kB] Get:198 http://deb.debian.org/debian forky/main amd64 libxcb-sync1 amd64 1.17.0-2+b2 [109 kB] Get:199 http://deb.debian.org/debian forky/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b2 [109 kB] Get:200 http://deb.debian.org/debian forky/main amd64 libxshmfence1 amd64 1.3.3-1+b2 [11.2 kB] Get:201 http://deb.debian.org/debian forky/main amd64 mesa-libgallium amd64 26.1.6-1 [11.7 MB] Get:202 http://deb.debian.org/debian forky/main amd64 libgbm1 amd64 26.1.6-1 [55.5 kB] Get:203 http://deb.debian.org/debian forky/main amd64 libvulkan1 amd64 1.4.363.0-1 [173 kB] Get:204 http://deb.debian.org/debian forky/main amd64 libgl1-mesa-dri amd64 26.1.6-1 [45.1 kB] Get:205 http://deb.debian.org/debian forky/main amd64 libxcb-glx0 amd64 1.17.0-2+b2 [122 kB] Get:206 http://deb.debian.org/debian forky/main amd64 libxxf86vm1 amd64 1:1.1.4-2+b1 [20.2 kB] Get:207 http://deb.debian.org/debian forky/main amd64 libglx-mesa0 amd64 26.1.6-1 [130 kB] Get:208 http://deb.debian.org/debian forky/main amd64 libglx0 amd64 1.7.0-3+b1 [34.9 kB] Get:209 http://deb.debian.org/debian forky/main amd64 libgl1 amd64 1.7.0-3+b1 [87.1 kB] Get:210 http://deb.debian.org/debian forky/main amd64 libgif7 amd64 6.1.3-1 [46.1 kB] Get:211 http://deb.debian.org/debian forky/main amd64 openjdk-25-jre amd64 25.0.5~7ea-1 [210 kB] Get:212 http://deb.debian.org/debian forky/main amd64 default-jre amd64 2:1.25-77 [1028 B] Get:213 http://deb.debian.org/debian forky/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2+b2 [135 kB] Get:214 http://deb.debian.org/debian forky/main amd64 dmsetup amd64 2:1.02.205-2+b2 [82.0 kB] Get:215 http://deb.debian.org/debian forky/main amd64 fonts-dejavu-extra all 2.37-9 [1791 kB] Get:216 http://deb.debian.org/debian forky/main amd64 fonts-lyx all 2.5.3-1 [190 kB] Get:217 http://deb.debian.org/debian forky/main amd64 gir1.2-glib-2.0 amd64 2.90.1-2 [181 kB] Get:218 http://deb.debian.org/debian forky/main amd64 libgirepository-2.0-0 amd64 2.90.1-2 [131 kB] Get:219 http://deb.debian.org/debian forky/main amd64 gir1.2-girepository-3.0 amd64 2.90.1-2 [45.0 kB] Get:220 http://deb.debian.org/debian forky/main amd64 libibus-1.0-5 amd64 1.5.35~rc1-1 [502 kB] Get:221 http://deb.debian.org/debian forky/main amd64 ibus-gtk3 amd64 1.5.35~rc1-1 [352 kB] Get:222 http://deb.debian.org/debian forky/main amd64 isympy-common all 1.14.0-6 [233 kB] Get:223 http://deb.debian.org/debian forky/main amd64 python3-mpmath all 1.4.1-4 [448 kB] Get:224 http://deb.debian.org/debian forky/main amd64 python3-sympy all 1.14.0-6 [4226 kB] Get:225 http://deb.debian.org/debian forky/main amd64 isympy3 all 1.14.0-6 [5592 B] Get:226 http://deb.debian.org/debian forky/main amd64 unzip amd64 6.0-31 [176 kB] Get:227 http://deb.debian.org/debian forky/main amd64 java-wrappers all 0.5 [8848 B] Get:228 http://deb.debian.org/debian forky/main amd64 javascript-common all 12+nmu1 [4864 B] Get:229 http://deb.debian.org/debian forky/main amd64 libhamcrest-java all 2.2-2 [121 kB] Get:230 http://deb.debian.org/debian forky/main amd64 junit4 all 4.13.2-6 [350 kB] Get:231 http://deb.debian.org/debian forky/main amd64 libabsl20260526 amd64 20260526.0-2+b1 [584 kB] Get:232 http://deb.debian.org/debian forky/main amd64 libsimdutf35 amd64 9.3.0+really9.1.2-1 [150 kB] Get:233 http://deb.debian.org/debian forky/main amd64 libada-url0-3 amd64 3.4.4-1+b1 [217 kB] Get:234 http://deb.debian.org/debian forky/main amd64 libaom3 amd64 3.14.1-1 [1923 kB] Get:235 http://deb.debian.org/debian forky/main amd64 libapache-pom-java all 33-2 [5852 B] Get:236 http://deb.debian.org/debian forky/main amd64 libice6 amd64 2:1.1.1-1+b2 [66.8 kB] Get:237 http://deb.debian.org/debian forky/main amd64 libsm6 amd64 2:1.2.6-1+b2 [37.9 kB] Get:238 http://deb.debian.org/debian forky/main amd64 libxt6t64 amd64 1:1.2.1-1.3+b2 [191 kB] Get:239 http://deb.debian.org/debian forky/main amd64 libxmu6 amd64 2:1.1.3-4+b1 [59.6 kB] Get:240 http://deb.debian.org/debian forky/main amd64 libxpm4 amd64 1:3.5.19-1 [58.9 kB] Get:241 http://deb.debian.org/debian forky/main amd64 libxaw7 amd64 2:1.0.16-1+b2 [214 kB] Get:242 http://deb.debian.org/debian forky/main amd64 libxcb-shape0 amd64 1.17.0-2+b2 [106 kB] Get:243 http://deb.debian.org/debian forky/main amd64 libxft2 amd64 2.3.6-1+b5 [54.8 kB] Get:244 http://deb.debian.org/debian forky/main amd64 libxkbfile1 amd64 1:1.1.0-1+b5 [76.7 kB] Get:245 http://deb.debian.org/debian forky/main amd64 libxmuu1 amd64 2:1.1.3-4+b1 [22.0 kB] Get:246 http://deb.debian.org/debian forky/main amd64 libxv1 amd64 2:1.0.13-1+b1 [25.2 kB] Get:247 http://deb.debian.org/debian forky/main amd64 libxxf86dga1 amd64 2:1.1.5-1+b4 [20.9 kB] Get:248 http://deb.debian.org/debian forky/main amd64 x11-utils amd64 7.7+7 [182 kB] Get:249 http://deb.debian.org/debian forky/main amd64 libatk-wrapper-java all 0.44.0-1 [64.5 kB] Get:250 http://deb.debian.org/debian forky/main amd64 libatk-wrapper-java-jni amd64 0.44.0-1+b1 [53.2 kB] Get:251 http://deb.debian.org/debian forky/main amd64 libgav1-2 amd64 0.20.0-2+b2 [372 kB] Get:252 http://deb.debian.org/debian forky/main amd64 librav1e0.8 amd64 0.8.1-12 [970 kB] Get:253 http://deb.debian.org/debian forky/main amd64 libsvtav1enc4 amd64 4.2.0+dfsg-1 [2492 kB] Get:254 http://deb.debian.org/debian forky/main amd64 libyuv0 amd64 0.0.1974.20261008-1 [195 kB] Get:255 http://deb.debian.org/debian forky/main amd64 libavif16 amd64 1.4.2-1 [147 kB] Get:256 http://deb.debian.org/debian forky/main amd64 libbpf1 amd64 1:1.7.0-1 [179 kB] Get:257 http://deb.debian.org/debian forky/main amd64 libcares2 amd64 1.34.8-1 [100 kB] Get:258 http://deb.debian.org/debian forky/main amd64 libcommons-collections3-java all 3.2.2-4 [531 kB] Get:259 http://deb.debian.org/debian forky/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:260 http://deb.debian.org/debian forky/main amd64 libcommons-logging-java all 1.3.0-2 [68.6 kB] Get:261 http://deb.debian.org/debian forky/main amd64 libcommons-beanutils-java all 1.10.1-1.1 [231 kB] Get:262 http://deb.debian.org/debian forky/main amd64 libcommons-codec-java all 1.22.1-1 [346 kB] Get:263 http://deb.debian.org/debian forky/main amd64 libcommons-collections4-java all 4.6.0-1 [835 kB] Get:264 http://deb.debian.org/debian forky/main amd64 libcommons-io-java all 2.22.0-1 [570 kB] Get:265 http://deb.debian.org/debian forky/main amd64 libcommons-compress-java all 1.27.1-2 [641 kB] Get:266 http://deb.debian.org/debian forky/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get:267 http://deb.debian.org/debian forky/main amd64 libcommons-lang-java all 2.6-12 [273 kB] Get:268 http://deb.debian.org/debian forky/main amd64 libcommons-lang3-java all 3.20.0-1 [679 kB] Get:269 http://deb.debian.org/debian forky/main amd64 libjson-c5 amd64 0.19+ds-1 [46.7 kB] Get:270 http://deb.debian.org/debian forky/main amd64 libcryptsetup12 amd64 2:2.8.8-1 [272 kB] Get:271 http://deb.debian.org/debian forky/main amd64 libdisplay-info3 amd64 0.3.0-1+b1 [78.8 kB] Get:272 http://deb.debian.org/debian forky/main amd64 libedlib1 amd64 1.2.7-7+b2 [20.2 kB] Get:273 http://deb.debian.org/debian forky/main amd64 libezmorph-java all 1.0.6-4 [75.9 kB] Get:274 http://deb.debian.org/debian forky/main amd64 libgpg-error0 amd64 1.61-5 [93.1 kB] Get:275 http://deb.debian.org/debian forky/main amd64 libgcrypt20 amd64 1.12.4-2 [936 kB] Get:276 http://deb.debian.org/debian forky/main amd64 libglib2.0-data all 2.90.1-2 [1329 kB] Get:277 http://deb.debian.org/debian forky/main amd64 libgomp1 amd64 16.2.0-3 [151 kB] Get:278 http://deb.debian.org/debian forky/main amd64 libgpg-error-l10n all 1.61-5 [119 kB] Get:279 http://deb.debian.org/debian forky/main amd64 libgpm2 amd64 1.20.7-12+b2 [13.9 kB] Get:280 http://deb.debian.org/debian forky/main amd64 libgtk-3-bin amd64 3.24.52-2 [78.3 kB] Get:281 http://deb.debian.org/debian forky/main amd64 libharfbuzz-subset0 amd64 12.3.2-2+b2 [574 kB] Get:282 http://deb.debian.org/debian forky/main amd64 libhdr-histogram6 amd64 0.11.8-4+b2 [20.6 kB] Get:283 http://deb.debian.org/debian forky/main amd64 libheif-plugin-aomenc amd64 1.23.6-2 [31.6 kB] Get:284 http://deb.debian.org/debian forky/main amd64 libnuma1 amd64 2.0.19-1+b2 [22.0 kB] Get:285 http://deb.debian.org/debian forky/main amd64 libx265-216 amd64 4.2-3 [1241 kB] Get:286 http://deb.debian.org/debian forky/main amd64 libheif-plugin-x265 amd64 1.23.6-2 [28.0 kB] Get:287 http://deb.debian.org/debian forky/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get:288 http://deb.debian.org/debian forky/main amd64 libslf4j-java all 1.7.36-1 [140 kB] Get:289 http://deb.debian.org/debian forky/main amd64 libjaxen-java all 1.2.0-1 [214 kB] Get:290 http://deb.debian.org/debian forky/main amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] Get:291 http://deb.debian.org/debian forky/main amd64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB] Get:292 http://deb.debian.org/debian forky/main amd64 libxerces2-java all 2.12.2-1 [1440 kB] Get:293 http://deb.debian.org/debian forky/main amd64 libxom-java all 1.4.6-1 [177 kB] Get:294 http://deb.debian.org/debian forky/main amd64 libjson-java all 3.2.0+dfsg-2 [142 kB] Get:295 http://deb.debian.org/debian forky/main amd64 libmbedcrypto16 amd64 3.6.7-3 [367 kB] Get:296 http://deb.debian.org/debian forky/main amd64 libmbedx509-7 amd64 3.6.7-3 [157 kB] Get:297 http://deb.debian.org/debian forky/main amd64 libmbedtls21 amd64 3.6.7-3 [250 kB] Get:298 http://deb.debian.org/debian forky/main amd64 ncbi-vdb-data all 3.4.1+dfsg-1 [86.1 kB] Get:299 http://deb.debian.org/debian forky/main amd64 libncbi-vdb3 amd64 3.4.1+dfsg-1 [1260 kB] Get:300 http://deb.debian.org/debian forky/main amd64 libncbi-ngs3 amd64 3.4.1+dfsg-2 [162 kB] Get:301 http://deb.debian.org/debian forky/main amd64 libngs-jni amd64 3.4.1+dfsg-2 [26.3 kB] Get:302 http://deb.debian.org/debian forky/main amd64 libngs-java amd64 3.4.1+dfsg-2 [113 kB] Get:303 http://deb.debian.org/debian forky/main amd64 librhino-java all 1.7.15.1-0.1 [1388 kB] Get:304 http://deb.debian.org/debian forky/main amd64 libsnappy1v5 amd64 1.3.1-3 [32.1 kB] Get:305 http://deb.debian.org/debian forky/main amd64 libsnappy-jni amd64 1.1.10.8-1 [6548 B] Get:306 http://deb.debian.org/debian forky/main amd64 libsnappy-java all 1.1.10.8-1 [87.8 kB] Get:307 http://deb.debian.org/debian forky/main amd64 libhtsjdk-java all 5.0.0+dfsg-2 [1930 kB] Get:308 http://deb.debian.org/debian forky/main amd64 libicu78 amd64 78.3-2 [10.0 MB] Get:309 http://deb.debian.org/debian forky/main amd64 libimagequant0 amd64 4.4.1-1+b2 [255 kB] Get:310 http://deb.debian.org/debian forky/main amd64 libjbig0 amd64 2.1-6.1+b3 [32.2 kB] Get:311 http://deb.debian.org/debian forky/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Get:312 http://deb.debian.org/debian forky/main amd64 libjs-sphinxdoc all 9.1.0-9 [46.3 kB] Get:313 http://deb.debian.org/debian forky/main amd64 libkmod2 amd64 34.2-2+b2 [62.5 kB] Get:314 http://deb.debian.org/debian forky/main amd64 libldap-common all 2.6.14+dfsg-2 [29.5 kB] Get:315 http://deb.debian.org/debian forky/main amd64 liblerc4 amd64 4.2.0+ds-1 [203 kB] Get:316 http://deb.debian.org/debian forky/main amd64 libllhttp9.4 amd64 9.4.3+~cs12.11.9-2 [30.5 kB] Get:317 http://deb.debian.org/debian forky/main amd64 liblmdb0 amd64 0.9.35-1 [45.8 kB] Get:318 http://deb.debian.org/debian forky/main amd64 libncurses6 amd64 6.6+20260608-2 [107 kB] Get:319 http://deb.debian.org/debian forky/main amd64 libnlopt1 amd64 2.11.0-2 [183 kB] Get:320 http://deb.debian.org/debian forky/main amd64 libsimdjson33 amd64 4.6.11-1 [82.6 kB] Get:321 http://deb.debian.org/debian forky/main amd64 libuv1t64 amd64 1.52.1-4 [158 kB] Get:322 http://deb.debian.org/debian forky/main amd64 node-corepack all 0.35.0-2 [106 kB] Get:323 http://deb.debian.org/debian forky/main amd64 nodejs amd64 24.21.0+dfsg+~cs24.13.4-1 [392 kB] Get:324 http://deb.debian.org/debian forky/main amd64 node-xtend all 4.0.2-3 [3932 B] Get:325 http://deb.debian.org/debian forky/main amd64 node-acorn all 8.17.0+ds+~cs28.27.25-1 [140 kB] Get:326 http://deb.debian.org/debian forky/main amd64 node-balanced-match all 2.0.0-1 [4872 B] Get:327 http://deb.debian.org/debian forky/main amd64 node-brace-expansion all 2.1.7+~1.1.2-1 [10.7 kB] Get:328 http://deb.debian.org/debian forky/main amd64 node-minimatch all 9.0.7-2 [53.0 kB] Get:329 http://deb.debian.org/debian forky/main amd64 node-ms all 2.1.3+~cs0.7.31-3 [5648 B] Get:330 http://deb.debian.org/debian forky/main amd64 node-debug all 4.4.3+~4.1.13-1 [16.3 kB] Get:331 http://deb.debian.org/debian forky/main amd64 node-lru-cache all 11.2.7-7 [64.0 kB] Get:332 http://deb.debian.org/debian forky/main amd64 node-semver all 7.7.4+~cs9.7.4-2 [52.7 kB] Get:333 http://deb.debian.org/debian forky/main amd64 node-llhttp all 9.4.3+~cs12.11.9-2 [158 kB] Get:334 http://deb.debian.org/debian forky/main amd64 node-undici all 8.10.2+dfsg+~cs3.2.2-1 [510 kB] Get:335 http://deb.debian.org/debian forky/main amd64 libnode137 amd64 24.21.0+dfsg+~cs24.13.4-1 [16.4 MB] Get:336 http://deb.debian.org/debian forky/main amd64 libopenjp2-7 amd64 2.5.4-1.1 [205 kB] Get:337 http://deb.debian.org/debian forky/main amd64 libqhull-r8.0 amd64 2020.2-9 [248 kB] Get:338 http://deb.debian.org/debian forky/main amd64 libraqm0 amd64 0.10.5-1 [13.6 kB] Get:339 http://deb.debian.org/debian forky/main amd64 librsvg2-common amd64 2.63.2+dfsg-1 [142 kB] Get:340 http://deb.debian.org/debian forky/main amd64 libsasl2-modules amd64 2.1.28+dfsg1-12 [66.5 kB] Get:341 http://deb.debian.org/debian forky/main amd64 libwebp7 amd64 1.6.0-0.1 [349 kB] Get:342 http://deb.debian.org/debian forky/main amd64 libwebpdemux2 amd64 1.6.0-0.1 [114 kB] Get:343 http://deb.debian.org/debian forky/main amd64 libwebpmux3 amd64 1.6.0-0.1 [127 kB] Get:344 http://deb.debian.org/debian forky/main amd64 libskia146 amd64 146.20260602~git.3476902+dfsg-5 [2798 kB] Get:345 http://deb.debian.org/debian forky/main amd64 libspoa7.0.0 amd64 4.1.5-2 [76.1 kB] Get:346 http://deb.debian.org/debian forky/main amd64 libssw0 amd64 1.1-16 [22.9 kB] Get:347 http://deb.debian.org/debian forky/main amd64 libtcl8.6 amd64 8.6.18+dfsg-1 [1053 kB] Get:348 http://deb.debian.org/debian forky/main amd64 libtiff6 amd64 4.7.2-1 [383 kB] Get:349 http://deb.debian.org/debian forky/main amd64 libxss1 amd64 1:1.2.3-1+b4 [17.0 kB] Get:350 http://deb.debian.org/debian forky/main amd64 libtk8.6 amd64 8.6.18-1 [801 kB] Get:351 http://deb.debian.org/debian forky/main amd64 libtss2-mu-4.0.1-0t64 amd64 4.2.0-2 [87.0 kB] Get:352 http://deb.debian.org/debian forky/main amd64 libtss2-tcti-cmd0t64 amd64 4.2.0-2 [41.5 kB] Get:353 http://deb.debian.org/debian forky/main amd64 libtss2-tcti-device0t64 amd64 4.2.0-2 [43.4 kB] Get:354 http://deb.debian.org/debian forky/main amd64 libtss2-tcti-mssim0t64 amd64 4.2.0-2 [43.2 kB] Get:355 http://deb.debian.org/debian forky/main amd64 libtss2-tcti-swtpm0t64 amd64 4.2.0-2 [43.4 kB] Get:356 http://deb.debian.org/debian forky/main amd64 libtss2-sys1t64 amd64 4.2.0-2 [64.7 kB] Get:357 http://deb.debian.org/debian forky/main amd64 libtss2-esys-3.0.2-0t64 amd64 4.2.0-2 [186 kB] Get:358 http://deb.debian.org/debian forky/main amd64 libtss2-rc0t64 amd64 4.2.0-2 [37.9 kB] Get:359 http://deb.debian.org/debian forky/main amd64 libxslt1.1 amd64 1.1.45-0.1 [158 kB] Get:360 http://deb.debian.org/debian forky/main amd64 libyaml-0-2 amd64 0.2.5-2+b1 [53.8 kB] Get:361 http://deb.debian.org/debian forky/main amd64 libzopfli1 amd64 1.0.3-3 [106 kB] Get:362 http://deb.debian.org/debian forky/main amd64 luit amd64 2.0.20250912-1 [55.2 kB] Get:363 http://deb.debian.org/debian forky/main amd64 mesa-vulkan-drivers amd64 26.1.6-1 [20.9 MB] Get:364 http://deb.debian.org/debian forky/main amd64 miniasm amd64 0.3+dfsg-4 [29.9 kB] Get:365 http://deb.debian.org/debian forky/main amd64 minimap amd64 0.2-8+b4 [26.9 kB] Get:366 http://deb.debian.org/debian forky/main amd64 ncbi-data all 6.1.20170106+dfsg2-7 [3540 kB] Get:367 http://deb.debian.org/debian forky/main amd64 ncbi-blast+ amd64 2.17.0+ds-7 [17.0 MB] Get:368 http://deb.debian.org/debian forky/main amd64 node-commander all 14.0.3-7 [76.8 kB] Get:369 http://deb.debian.org/debian forky/main amd64 node-mj-context-menu all 0.9.1+ds-3 [70.3 kB] Get:370 http://deb.debian.org/debian forky/main amd64 node-xmldom all 0.9.12-1 [93.1 kB] Get:371 http://deb.debian.org/debian forky/main amd64 node-speech-rule-engine all 4.1.4+~0.1.31-2 [564 kB] Get:372 http://deb.debian.org/debian forky/main amd64 node-mathjax-full all 3.2.2+~cs4.2.1-6 [3671 kB] Get:373 http://deb.debian.org/debian forky/main amd64 nodejs-doc all 24.21.0+dfsg+~cs24.13.4-1 [7583 kB] Get:374 http://deb.debian.org/debian forky/main amd64 scala-library all 2.11.12-6 [9586 kB] Get:375 http://deb.debian.org/debian forky/main amd64 pilon all 1.24-4 [497 kB] Get:376 http://deb.debian.org/debian forky/main amd64 psmisc amd64 23.7-2 [267 kB] Get:377 http://deb.debian.org/debian forky/main amd64 publicsuffix all 20261007.0728-1 [330 kB] Get:378 http://deb.debian.org/debian forky/main amd64 python-biopython-doc all 1.88+dfsg-2 [18.1 MB] Get:379 http://deb.debian.org/debian forky/main amd64 python-matplotlib-data all 3.10.9+dfsg1-1 [2734 kB] Get:380 http://deb.debian.org/debian forky/main amd64 python3-argcomplete all 3.7.0-1 [40.0 kB] Get:381 http://deb.debian.org/debian forky/main amd64 python3-argh all 0.31.3-2 [26.6 kB] Get:382 http://deb.debian.org/debian forky/main amd64 python3-attr all 26.1.0-1 [72.2 kB] Get:383 http://deb.debian.org/debian forky/main amd64 python3-charset-normalizer amd64 3.4.7-2+b1 [190 kB] Get:384 http://deb.debian.org/debian forky/main amd64 python3.14-tk amd64 3.14.8-1 [108 kB] Get:385 http://deb.debian.org/debian forky/main amd64 python3-tk amd64 3.14.7-3 [8472 B] Get:386 http://deb.debian.org/debian forky/main amd64 python3-pil.imagetk amd64 12.3.0-1+b1 [83.6 kB] Get:387 http://deb.debian.org/debian forky/main amd64 python3-pil amd64 12.3.0-1+b1 [555 kB] Get:388 http://deb.debian.org/debian forky/main amd64 python3-cairo amd64 1.29.1-1 [111 kB] Get:389 http://deb.debian.org/debian forky/main amd64 python3-freetype all 2.5.1-3 [88.9 kB] Get:390 http://deb.debian.org/debian forky/main amd64 python3-rlpycairo all 0.3.0-4 [10.1 kB] Get:391 http://deb.debian.org/debian forky/main amd64 python3-uharfbuzz amd64 0.53.3-1+b1 [219 kB] Get:392 http://deb.debian.org/debian forky/main amd64 python3-reportlab all 5.0.0-4 [823 kB] Get:393 http://deb.debian.org/debian forky/main amd64 sgml-base all 1.31+nmu1 [10.9 kB] Get:394 http://deb.debian.org/debian forky/main amd64 xml-core all 0.21 [19.0 kB] Get:395 http://deb.debian.org/debian forky/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get:396 http://deb.debian.org/debian forky/main amd64 python3-biopython amd64 1.88+dfsg-2+b1 [1619 kB] Get:397 http://deb.debian.org/debian forky/main amd64 python3-brotli amd64 1.2.0-4+b1 [317 kB] Get:398 http://deb.debian.org/debian forky/main amd64 python3-soupsieve all 2.8.4-1 [38.7 kB] Get:399 http://deb.debian.org/debian forky/main amd64 python3-typing-extensions all 4.16.0-5 [95.2 kB] Get:400 http://deb.debian.org/debian forky/main amd64 python3-bs4 all 4.15.0-1 [119 kB] Get:401 http://deb.debian.org/debian forky/main amd64 python3-contourpy amd64 1.3.3-2+b1 [228 kB] Get:402 http://deb.debian.org/debian forky/main amd64 python3-cssselect all 1.6.0-1 [25.6 kB] Get:403 http://deb.debian.org/debian forky/main amd64 python3-cycler all 0.12.1-3 [9112 B] Get:404 http://deb.debian.org/debian forky/main amd64 python3-dateutil all 2.9.0-5 [78.7 kB] Get:405 http://deb.debian.org/debian forky/main amd64 python3-lxml amd64 6.1.3-1 [1527 kB] Get:406 http://deb.debian.org/debian forky/main amd64 python3-lz4 amd64 4.4.5+dfsg-1+b1 [26.1 kB] Get:407 http://deb.debian.org/debian forky/main amd64 python3-munkres all 1.1.4-4 [10.8 kB] Get:408 http://deb.debian.org/debian forky/main amd64 python3-ufolib2 all 0.18.1+dfsg1-2 [32.3 kB] Get:409 http://deb.debian.org/debian forky/main amd64 python3-zopfli amd64 0.4.3-2 [10.8 kB] Get:410 http://deb.debian.org/debian forky/main amd64 unicode-data all 17.0.0-2 [9354 kB] Get:411 http://deb.debian.org/debian forky/main amd64 python3-fonttools amd64 4.65.0-1 [1513 kB] Get:412 http://deb.debian.org/debian forky/main amd64 python3-packaging all 26.2-3 [84.3 kB] Get:413 http://deb.debian.org/debian forky/main amd64 python3-pyfaidx all 0.8.1.3-2 [29.1 kB] Get:414 http://deb.debian.org/debian forky/main amd64 python3-gffutils all 0.14-1 [1045 kB] Get:415 http://deb.debian.org/debian forky/main amd64 python3-gi amd64 3.58.0-1 [239 kB] Get:416 http://deb.debian.org/debian forky/main amd64 python3-webencodings all 0.5.1-6 [11.2 kB] Get:417 http://deb.debian.org/debian forky/main amd64 python3-html5lib all 1.2-5 [87.4 kB] Get:418 http://deb.debian.org/debian forky/main amd64 python3-iniconfig all 2.1.0-2 [7540 B] Get:419 http://deb.debian.org/debian forky/main amd64 python3-joblib all 1.5.3-2 [222 kB] Get:420 http://deb.debian.org/debian forky/main amd64 python3-kiwisolver amd64 1.5.1-1 [65.4 kB] Get:421 http://deb.debian.org/debian forky/main amd64 python3-pyparsing all 3.3.2-2 [165 kB] Get:422 http://deb.debian.org/debian forky/main amd64 python3-matplotlib amd64 3.10.9+dfsg1-1+b1 [22.6 MB] Get:423 http://deb.debian.org/debian forky/main amd64 python3-olefile all 0.47-1 [39.3 kB] Get:424 http://deb.debian.org/debian forky/main amd64 python3-pluggy all 1.6.0-2 [27.2 kB] Get:425 http://deb.debian.org/debian forky/main amd64 python3-psutil amd64 7.1.0-1 [224 kB] Get:426 http://deb.debian.org/debian forky/main amd64 python3-pysam amd64 0.24.1+ds-2 [1957 kB] Get:427 http://deb.debian.org/debian forky/main amd64 python3-pybedtools amd64 0.10.0-6+b1 [12.1 MB] Get:428 http://deb.debian.org/debian forky/main amd64 python3-pygments all 2.20.0+dfsg-2 [850 kB] Get:429 http://deb.debian.org/debian forky/main amd64 python3-pytest all 9.1.1-1 [280 kB] Get:430 http://deb.debian.org/debian forky/main amd64 python3-skia-pathops amd64 0.9.2-2 [141 kB] Get:431 http://deb.debian.org/debian forky/main amd64 python3-yaml amd64 6.0.3-1+b1 [138 kB] Get:432 http://deb.debian.org/debian forky/main amd64 racon amd64 1.5.0-4 [3117 kB] Get:433 http://deb.debian.org/debian forky/main amd64 rampler amd64 2.1.1-1 [21.2 kB] Get:434 http://deb.debian.org/debian forky/main amd64 samtools amd64 1.24-2 [730 kB] Get:435 http://deb.debian.org/debian forky/main amd64 spades amd64 4.0.0+really3.15.5+dfsg-3.1 [9616 kB] Get:436 http://deb.debian.org/debian forky/main amd64 systemd-cryptsetup amd64 262-1 [186 kB] Get:437 http://deb.debian.org/debian forky/main amd64 tpm-udev all 4.2.0-2 [34.7 kB] Get:438 http://deb.debian.org/debian forky/main amd64 systemd-tpm amd64 262-1 [167 kB] Get:439 http://deb.debian.org/debian forky/main amd64 systemd-userdbd amd64 262-1 [84.6 kB] Get:440 http://deb.debian.org/debian forky/main amd64 unicycler amd64 0.5.1+dfsg-5 [905 kB] Get:441 http://deb.debian.org/debian forky/main amd64 unicycler-data all 0.5.1+dfsg-5 [12.0 MB] Get:442 http://deb.debian.org/debian forky/main amd64 xdg-user-dirs amd64 0.20-1 [41.9 kB] Preconfiguring packages ... Fetched 440 MB in 3s (163 MB/s) Selecting previously unselected package libsystemd-shared:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4950 files and directories currently installed.) Preparing to unpack .../libsystemd-shared_262-1_amd64.deb ... Unpacking libsystemd-shared:amd64 (262-1) ... Setting up libsystemd-shared:amd64 (262-1) ... Selecting previously unselected package systemd. (Reading database ... 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Created symlink '/etc/systemd/system/autovt@.service' → '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' → '/usr/lib/systemd/system/getty@.service'. Initializing machine ID from random generator. Creating group 'lpadmin' with GID 999. Creating group 'systemd-journal' with GID 998. Creating group 'systemd-network' with GID 997. Creating user 'systemd-network' (systemd Network Management) with UID 997 and GID 997. [ESC][0;1;31m"/home" already exists and is not a directory.[ESC][0m Selecting previously unselected package systemd-sysv. (Reading database ... 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Unpacking libpython3.14-minimal:amd64 (3.14.8-1) ... Selecting previously unselected package python3.14-minimal. Preparing to unpack .../python3.14-minimal_3.14.8-1_amd64.deb ... Unpacking python3.14-minimal (3.14.8-1) ... Setting up libpython3.14-minimal:amd64 (3.14.8-1) ... Setting up libexpat1:amd64 (2.9.0-1) ... Setting up python3.14-minimal (3.14.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6290 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.14.7-3_amd64.deb ... Unpacking python3-minimal (3.14.7-3) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_14.0.0_all.deb ... Unpacking media-types (14.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.6_all.deb ... Unpacking netbase (6.6) ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../07-libsqlite3-0_3.53.4-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.53.4-2) ... Selecting previously unselected package libpython3.14-stdlib:amd64. Preparing to unpack .../08-libpython3.14-stdlib_3.14.8-1_amd64.deb ... Unpacking libpython3.14-stdlib:amd64 (3.14.8-1) ... Selecting previously unselected package python3.14. Preparing to unpack .../09-python3.14_3.14.8-1_amd64.deb ... Unpacking python3.14 (3.14.8-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../10-libpython3-stdlib_3.14.7-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.14.7-3) ... Setting up python3-minimal (3.14.7-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6820 files and directories currently installed.) Preparing to unpack .../0-python3_3.14.7-3_amd64.deb ... Unpacking python3 (3.14.7-3) ... Selecting previously unselected package python3-numpy-dev:amd64. Preparing to unpack .../1-python3-numpy-dev_1%3a2.4.6+ds-4+b1_amd64.deb ... Unpacking python3-numpy-dev:amd64 (1:2.4.6+ds-4+b1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../2-libblas3_3.12.1-8_amd64.deb ... 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Selecting previously unselected package libapparmor1:amd64. Preparing to unpack .../009-libapparmor1_4.1.8-3_amd64.deb ... Unpacking libapparmor1:amd64 (4.1.8-3) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../010-dbus-daemon_1.16.2-8_amd64.deb ... Unpacking dbus-daemon (1.16.2-8) ... Selecting previously unselected package dbus-system-bus-common. Preparing to unpack .../011-dbus-system-bus-common_1.16.2-8_all.deb ... Unpacking dbus-system-bus-common (1.16.2-8) ... Selecting previously unselected package dbus. Preparing to unpack .../012-dbus_1.16.2-8_amd64.deb ... Unpacking dbus (1.16.2-8) ... Selecting previously unselected package krb5-locales. Preparing to unpack .../013-krb5-locales_1.22.1-3_all.deb ... Unpacking krb5-locales (1.22.1-3) ... Selecting previously unselected package libnss-systemd:amd64. Preparing to unpack .../014-libnss-systemd_262-1_amd64.deb ... Unpacking libnss-systemd:amd64 (262-1) ... 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Selecting previously unselected package systemd-timesyncd. Preparing to unpack .../021-systemd-timesyncd_262-1_amd64.deb ... Unpacking systemd-timesyncd (262-1) ... Selecting previously unselected package libcap2:amd64. Preparing to unpack .../022-libcap2_1%3a2.78-1+b1_amd64.deb ... Unpacking libcap2:amd64 (1:2.78-1+b1) ... Selecting previously unselected package bubblewrap. Preparing to unpack .../023-bubblewrap_0.13.0-1_amd64.deb ... Unpacking bubblewrap (0.13.0-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../024-libbrotli1_1.2.0-4+b1_amd64.deb ... Unpacking libbrotli1:amd64 (1.2.0-4+b1) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../025-libpng16-16t64_1.6.59-1_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.59-1) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../026-libfreetype6_2.14.3+dfsg-3_amd64.deb ... Unpacking libfreetype6:amd64 (2.14.3+dfsg-3) ... 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Adding 'diversion of /usr/bin/luit to /usr/bin/luit.x11-utils by luit' Adding 'diversion of /usr/share/man/man1/luit.1.gz to /usr/share/man/man1/luit.x11-utils.1.gz by luit' Unpacking luit (2.0.20250912-1) ... Selecting previously unselected package mesa-vulkan-drivers:amd64. Preparing to unpack .../338-mesa-vulkan-drivers_26.1.6-1_amd64.deb ... Unpacking mesa-vulkan-drivers:amd64 (26.1.6-1) ... Selecting previously unselected package miniasm. Preparing to unpack .../339-miniasm_0.3+dfsg-4_amd64.deb ... Unpacking miniasm (0.3+dfsg-4) ... Selecting previously unselected package minimap. Preparing to unpack .../340-minimap_0.2-8+b4_amd64.deb ... Unpacking minimap (0.2-8+b4) ... Selecting previously unselected package ncbi-data. Preparing to unpack .../341-ncbi-data_6.1.20170106+dfsg2-7_all.deb ... Unpacking ncbi-data (6.1.20170106+dfsg2-7) ... Selecting previously unselected package ncbi-blast+. Preparing to unpack .../342-ncbi-blast+_2.17.0+ds-7_amd64.deb ... 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Setting up liblcms2-2:amd64 (2.19.1-1) ... Setting up ncbi-data (6.1.20170106+dfsg2-7) ... Setting up libpixman-1-0:amd64 (0.46.4-1+b2) ... Setting up tpm-udev (4.2.0-2) ... Creating group 'tss' with GID 996. Creating user 'tss' (tss user for tpm2) with UID 996 and GID 996. Created symlink '/etc/systemd/system/paths.target.wants/tpm-udev.path' → '/usr/lib/systemd/system/tpm-udev.path'. /var/lib/dpkg/info/tpm-udev.postinst: 52: udevadm: not found Setting up libsharpyuv0:amd64 (1.6.0-0.1) ... Setting up libaom3:amd64 (3.14.1-1) ... Setting up luit (2.0.20250912-1) ... Setting up node-xmldom (0.9.12-1) ... Setting up systemd-sysv (262-1) ... Setting up libxau6:amd64 (1:1.0.11-1+b2) ... Setting up libxdmcp6:amd64 (1:1.1.5-2+b1) ... Setting up node-lru-cache (11.2.7-7) ... Setting up libkeyutils1:amd64 (1.6.3-6+b2) ... Setting up libapparmor1:amd64 (4.1.8-3) ... Setting up pci.ids (0.0~2026.09.23-1) ... Setting up libxcb1:amd64 (1.17.0-2+b2) ... Setting up libgpm2:amd64 (1.20.7-12+b2) ... Setting up libxcb-xfixes0:amd64 (1.17.0-2+b2) ... Setting up liblerc4:amd64 (4.2.0+ds-1) ... Setting up libllhttp9.4:amd64 (9.4.3+~cs12.11.9-2) ... Setting up libgdbm6t64:amd64 (1.26-1+b2) ... Setting up hicolor-icon-theme (0.18-2) ... Setting up libgpg-error0:amd64 (1.61-5) ... Setting up minimap (0.2-8+b4) ... Setting up java-common (0.77) ... Setting up libdatrie1:amd64 (0.2.14-2) ... Setting up libgdbm-compat4t64:amd64 (1.26-1+b2) ... Setting up xdg-user-dirs (0.20-1) ... Created symlink '/etc/systemd/user/graphical-session-pre.target.wants/xdg-user-dirs.service' → '/usr/lib/systemd/user/xdg-user-dirs.service'. Setting up miniasm (0.3+dfsg-4) ... Setting up psmisc (23.7-2) ... Setting up libxcb-render0:amd64 (1.17.0-2+b2) ... Setting up libyaml-0-2:amd64 (0.2.5-2+b1) ... Setting up bwa (0.7.19-1) ... Setting up libglvnd0:amd64 (1.7.0-3+b1) ... Setting up libxml2-16:amd64 (2.15.4+dfsg-1) ... Setting up libsimdutf35:amd64 (9.3.0+really9.1.2-1) ... Setting up libdisplay-info3:amd64 (0.3.0-1+b1) ... Setting up unicycler-data (0.5.1+dfsg-5) ... Setting up fonts-lyx (2.5.3-1) ... Setting up libtss2-rc0t64:amd64 (4.2.0-2) ... Setting up libxcb-glx0:amd64 (1.17.0-2+b2) ... Setting up unzip (6.0-31) ... Setting up libbrotli1:amd64 (1.2.0-4+b1) ... Setting up libedit2:amd64 (3.1-20260512-1) ... Setting up libtss2-mu-4.0.1-0t64:amd64 (4.2.0-2) ... Setting up libsqlite3-0:amd64 (3.53.4-2) ... Setting up libnlopt1:amd64 (2.11.0-2) ... Setting up libsasl2-modules:amd64 (2.1.28+dfsg1-12) ... Setting up libgdk-pixbuf2.0-common (2.44.8+dfsg-1) ... Setting up libuv1t64:amd64 (1.52.1-4) ... Setting up libxcb-shape0:amd64 (1.17.0-2+b2) ... Setting up x11-common (1:7.7+26) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libsensors-config (1:3.6.2-2) ... Setting up libnghttp2-14:amd64 (1.70.0-1) ... Setting up libdeflate0:amd64 (1.25-1) ... Setting up liblog4j1.2-java (1.2.17-11) ... Setting up libgcrypt20:amd64 (1.12.4-2) ... Setting up libnss-systemd:amd64 (262-1) ... Setting up scala-library (2.11.12-6) ... Setting up libqhull-r8.0:amd64 (2020.2-9) ... Setting up xkb-data (2.48-1) ... Setting up krb5-locales (1.22.1-3) ... Setting up libxcb-shm0:amd64 (1.17.0-2+b2) ... Setting up node-mj-context-menu (0.9.1+ds-3) ... Setting up libcom-err2:amd64 (1.47.4-1+b2) ... Setting up libgomp1:amd64 (16.2.0-3) ... Setting up libldap-common (2.6.14+dfsg-2) ... Setting up libjbig0:amd64 (2.1-6.1+b3) ... Setting up libcap2:amd64 (1:2.78-1+b1) ... Setting up libhdr-histogram6:amd64 (0.11.8-4+b2) ... Setting up libelf1t64:amd64 (0.196-1) ... Setting up libsnappy1v5:amd64 (1.3.1-3) ... Setting up libkrb5support0:amd64 (1.22.1-3) ... Setting up librav1e0.8:amd64 (0.8.1-12) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-12) ... Setting up libicu78:amd64 (78.3-2) ... Setting up libxcb-present0:amd64 (1.17.0-2+b2) ... Setting up unicode-data (17.0.0-2) ... Setting up libcommons-collections3-java (3.2.2-4) ... Setting up libasound2-data (1.2.16.1-2) ... Setting up libfontenc1:amd64 (1:1.1.8-1+b3) ... Setting up librhino-java (1.7.15.1-0.1) ... Setting up libz3-4:amd64 (4.13.3-1.1) ... Setting up libblas3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libglib2.0-data (2.90.1-2) ... Setting up linux-sysctl-defaults (4.17) ... Setting up libasound2t64:amd64 (1.2.16.1-2) ... Setting up libabsl20260526:amd64 (20260526.0-2+b1) ... Setting up libjpeg62-turbo:amd64 (1:3.1.3-4) ... Setting up libzopfli1 (1.0.3-3) ... Setting up rampler (2.1.1-1) ... Setting up libjaxen-java (1.2.0-1) ... Setting up libtss2-sys1t64:amd64 (4.2.0-2) ... Setting up libproc2-1:amd64 (2:4.0.7-1) ... Setting up libx11-data (2:1.8.13-1) ... Setting up libepoxy0:amd64 (1.5.10-2+b2) ... Setting up libnspr4:amd64 (2:4.40-1) ... Setting up libxcb-sync1:amd64 (1.17.0-2+b2) ... Setting up node-balanced-match (2.0.0-1) ... Setting up node-brace-expansion (2.1.7+~1.1.2-1) ... Setting up libjsoncpp26:amd64 (1.9.8-2) ... Setting up libapache-pom-java (33-2) ... Setting up libavahi-common-data:amd64 (0.8-18) ... Setting up libncurses6:amd64 (6.6+20260608-2) ... Setting up libdbus-1-3:amd64 (1.16.2-8) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:amd64 (1.0.16-5+b1) ... Setting up libsimdjson33:amd64 (4.6.11-1) ... Setting up libimagequant0:amd64 (4.4.1-1+b2) ... Setting up libunistring5:amd64 (1.4.2-1) ... Setting up fonts-dejavu-mono (2.37-9) ... Setting up libspoa7.0.0:amd64 (4.1.5-2) ... Setting up libpng16-16t64:amd64 (1.6.59-1) ... Setting up libxml-commons-resolver1.1-java (1.2-11) ... Setting up libcares2:amd64 (1.34.8-1) ... Setting up python3-numpy-dev:amd64 (1:2.4.6+ds-4+b1) ... Setting up systemd-timesyncd (262-1) ... Creating group 'systemd-timesync' with GID 995. Creating user 'systemd-timesync' (systemd Time Synchronization) with UID 995 and GID 995. Created symlink '/etc/systemd/system/dbus-org.freedesktop.timesync1.service' → '/usr/lib/systemd/system/systemd-timesyncd.service'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-timesyncd.service' → '/usr/lib/systemd/system/systemd-timesyncd.service'. Setting up libtss2-tcti-device0t64:amd64 (4.2.0-2) ... Setting up libatomic1:amd64 (16.2.0-3) ... Setting up libtcl8.6:amd64 (8.6.18+dfsg-1) ... Setting up fonts-dejavu-core (2.37-9) ... Setting up libpcsclite1:amd64 (2.5.2-1) ... Setting up libsensors5:amd64 (1:3.6.2-2+b2) ... Setting up libncursesw6:amd64 (6.6+20260608-2) ... Setting up libk5crypto3:amd64 (1.22.1-3) ... Setting up libsvtav1enc4:amd64 (4.2.0+dfsg-1) ... Setting up libhamcrest-java (2.2-2) ... Setting up libjs-sphinxdoc (9.1.0-9) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-12) ... Setting up libgfortran5:amd64 (16.2.0-3) ... Setting up libvulkan1:amd64 (1.4.363.0-1) ... Setting up libnghttp3-9:amd64 (1.17.0-1) ... Setting up nodejs-doc (24.21.0+dfsg+~cs24.13.4-1) ... Setting up libwebp7:amd64 (1.6.0-0.1) ... Setting up libgif7:amd64 (6.1.3-1) ... Setting up libedlib1:amd64 (1.2.7-7+b2) ... Setting up libgav1-2:amd64 (0.20.0-2+b2) ... Setting up node-commander (14.0.3-7) ... Setting up libffi8:amd64 (3.8.0-2) ... Setting up fonts-dejavu-extra (2.37-9) ... Setting up libnuma1:amd64 (2.0.19-1+b2) ... Setting up alsa-topology-conf (1.2.5.1-3) ... Setting up libbamtools2.5.3:amd64 (2.5.3+dfsg-2) ... Setting up libdav1d7:amd64 (1.5.4-1) ... Setting up libxshmfence1:amd64 (1.3.3-1+b2) ... Setting up at-spi2-common (2.62.1-1) ... Setting up libtiff6:amd64 (4.7.2-1) ... Setting up bamtools (2.5.3+dfsg-2) ... Setting up libxcb-randr0:amd64 (1.17.0-2+b2) ... Setting up dbus-session-bus-common (1.16.2-8) ... Setting up libxml-commons-external-java (1.4.01-6) ... Setting up procps (2:4.0.7-1) ... Setting up libtss2-tcti-mssim0t64:amd64 (4.2.0-2) ... Setting up sse4.2-support (34) ... Setting up libxslt1.1:amd64 (1.1.45-0.1) ... Setting up libtasn1-6:amd64 (4.21.0-2+b1) ... Setting up libada-url0-3:amd64 (3.4.4-1+b1) ... Setting up libopenjp2-7:amd64 (2.5.4-1.1) ... Setting up libx11-6:amd64 (2:1.8.13-1) ... Setting up libthai-data (0.1.30-3) ... Setting up netbase (6.6) ... Setting up libngtcp2-16:amd64 (1.24.0-1) ... Setting up sgml-base (1.31+nmu1) ... Setting up libx265-216:amd64 (4.2-3) ... Setting up libkrb5-3:amd64 (1.22.1-3) ... Setting up libtss2-tcti-cmd0t64:amd64 (4.2.0-2) ... Setting up libwayland-egl1:amd64 (1.26.0-1) ... Setting up node-minimatch (9.0.7-2) ... Setting up libmbedcrypto16:amd64 (3.6.7-3) ... Setting up libxkbfile1:amd64 (1:1.1.0-1+b5) ... Setting up libssh2-1t64:amd64 (1.11.1-6) ... Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... Setting up libxerces2-java (2.12.2-1) ... Setting up dbus-system-bus-common (1.16.2-8) ... Creating group 'messagebus' with GID 994. Creating user 'messagebus' (System Message Bus) with UID 994 and GID 994. Setting up perl-modules-5.42 (5.42.3-1) ... Setting up node-xtend (4.0.2-3) ... Setting up libde265-0:amd64 (1.1.3-1+b1) ... Setting up libtss2-tcti-swtpm0t64:amd64 (4.2.0-2) ... Setting up python-matplotlib-data (3.10.9+dfsg1-1) ... Setting up openssl (3.6.5-1) ... Setting up libwebpmux3:amd64 (1.6.0-0.1) ... Setting up libgpg-error-l10n (1.61-5) ... Setting up libdrm-common (2.4.134-3) ... Setting up libyuv0:amd64 (0.0.1974.20261008-1) ... Setting up libsnappy-jni (1.1.10.8-1) ... Setting up libezmorph-java (1.0.6-4) ... Setting up libxcomposite1:amd64 (1:0.4.6-1+b2) ... Setting up libjxl0.11:amd64 (0.11.2-5.1) ... Setting up libssw0:amd64 (1.1-16) ... Setting up libjson-c5:amd64 (0.19+ds-1) ... Setting up readline-common (8.3-4) ... Setting up publicsuffix (20261007.0728-1) ... Setting up libldap2:amd64 (2.6.14+dfsg-2) ... Setting up libxmuu1:amd64 (2:1.1.3-4+b1) ... Setting up dbus-bin (1.16.2-8) ... Setting up libbpf1:amd64 (1:1.7.0-1) ... Setting up libkmod2:amd64 (34.2-2+b2) ... Setting up libxkbcommon0:amd64 (1.13.1-1) ... Setting up libwayland-client0:amd64 (1.26.0-1) ... Setting up systemd-userdbd (262-1) ... Created symlink '/etc/systemd/system/sockets.target.wants/systemd-userdbd.socket' → '/usr/lib/systemd/system/systemd-userdbd.socket'. Setting up bubblewrap (0.13.0-1) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2+b2) ... Setting up libx11-xcb1:amd64 (2:1.8.13-1) ... Setting up libice6:amd64 (2:1.1.1-1+b2) ... Setting up libpciaccess0:amd64 (0.19-2) ... Setting up libavif16:amd64 (1.4.2-1) ... Setting up liblapack3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxdamage1:amd64 (1:1.1.7-1+b1) ... Setting up java-wrappers (0.5) ... Setting up libxpm4:amd64 (1:3.5.19-1) ... Setting up libxrender1:amd64 (1:0.9.12-1+b2) ... Setting up alsa-ucm-conf (1.2.16.1-1) ... Setting up fontconfig-config (2.17.1-5) ... Setting up libwebpdemux2:amd64 (1.6.0-0.1) ... Setting up libcommons-parent-java (56-1) ... Setting up libavahi-common3:amd64 (0.8-18) ... Setting up libcommons-logging-java (1.3.0-2) ... Setting up libxext6:amd64 (2:1.3.4-1+b4) ... Setting up libidn2-0:amd64 (2.3.8-5) ... Setting up libnss3:amd64 (2:3.131-1) ... Setting up dbus-daemon (1.16.2-8) ... Setting up libperl5.42:amd64 (5.42.3-1) ... Setting up libxom-java (1.4.6-1) ... Setting up libcommons-lang-java (2.6-12) ... Setting up libxxf86vm1:amd64 (1:1.1.4-2+b1) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up libthai0:amd64 (0.1.30-3) ... Setting up ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 121 added, 0 removed; done. Setting up perl (5.42.3-1) ... Setting up libglib2.0-0t64:amd64 (2.90.1-2) ... Setting up libmbedx509-7:amd64 (3.6.7-3) ... Setting up libfreetype6:amd64 (2.14.3+dfsg-3) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b5) ... Setting up libllvm21:amd64 (1:21.1.8-13) ... Setting up dbus (1.16.2-8) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up shared-mime-info (2.4-5+b3) ... Setting up libp11-kit0:amd64 (0.26.5-1) ... Setting up libxinerama1:amd64 (2:1.1.4-3+b5) ... Setting up racon (1.5.0-4) ... Setting up libxv1:amd64 (2:1.0.13-1+b1) ... Setting up libgssapi-krb5-2:amd64 (1.22.1-3) ... Setting up libxrandr2:amd64 (2:1.5.4-1+b4) ... Setting up libcommons-collections4-java (4.6.0-1) ... Setting up libtss2-esys-3.0.2-0t64:amd64 (4.2.0-2) ... Setting up gir1.2-glib-2.0:amd64 (2.90.1-2) ... Setting up libcommons-lang3-java (3.20.0-1) ... Setting up libmbedtls21:amd64 (3.6.7-3) ... Setting up libreadline8t64:amd64 (8.3-4) ... Setting up libdrm2:amd64 (2.4.134-3) ... Setting up libwayland-cursor0:amd64 (1.26.0-1) ... Setting up xml-core (0.21) ... Setting up libpam-systemd:amd64 (262-1) ... Setting up libcommons-beanutils-java (1.10.1-1.1) ... Setting up libharfbuzz0b:amd64 (12.3.2-2+b2) ... Setting up libsnappy-java (1.1.10.8-1) ... Setting up libxss1:amd64 (1:1.2.3-1+b4) ... Setting up libfontconfig1:amd64 (2.17.1-5) ... Setting up ca-certificates-java (20260311) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-codec-java (1.22.1-1) ... Setting up libsm6:amd64 (2:1.2.6-1+b2) ... Setting up libavahi-client3:amd64 (0.8-18) ... Setting up libxres1:amd64 (2:1.2.1-2) ... Setting up libdrm-amdgpu1:amd64 (2.4.134-3) ... Setting up libgnutls30t64:amd64 (3.8.13-1) ... Setting up mesa-vulkan-drivers:amd64 (26.1.6-1) ... Setting up libslf4j-java (1.7.36-1) ... Setting up fontconfig (2.17.1-5) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.6-1+b5) ... Setting up libatk1.0-0t64:amd64 (2.62.1-1) ... Setting up user-session-migration (0.5.2) ... Created symlink '/etc/systemd/user/graphical-session-pre.target.wants/user-session-migration.service' → '/usr/lib/systemd/user/user-session-migration.service'. Setting up libxi6:amd64 (2:1.8.3-1) ... Setting up libgirepository-2.0-0:amd64 (2.90.1-2) ... Setting up libpython3.14-stdlib:amd64 (3.14.8-1) ... Setting up libcommons-io-java (2.22.0-1) ... Setting up libxtst6:amd64 (2:1.2.5-1+b2) ... Setting up libtk8.6:amd64 (8.6.18-1) ... Setting up libxcursor1:amd64 (1:1.2.3-1+b2) ... Setting up openjdk-25-jre-headless:amd64 (25.0.5~7ea-1) ... update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-25-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libpango-1.0-0:amd64 (1.58.2-1) ... Setting up libdrm-intel1:amd64 (2.4.134-3) ... Setting up libibus-1.0-5:amd64 (1.5.35~rc1-1) ... Setting up libpsl5t64:amd64 (0.23.3-1) ... Setting up systemd-tpm (262-1) ... Setting up libxxf86dga1:amd64 (2:1.1.5-1+b4) ... Setting up libcloudproviders0:amd64 (0.4.1-1) ... Setting up xfonts-utils (1:7.7+7) ... Setting up libcairo2:amd64 (1.18.4-3+b1) ... Setting up gir1.2-girepository-3.0:amd64 (2.90.1-2) ... Setting up libcolord2:amd64 (1.4.8-3) ... Setting up libdconf1:amd64 (51.0-2) ... Setting up dbus-user-session (1.16.2-8) ... Setting up libatspi2.0-0t64:amd64 (2.62.1-1) ... Setting up libraqm0:amd64 (0.10.5-1) ... Setting up libxt6t64:amd64 (1:1.2.1-1.3+b2) ... Setting up libharfbuzz-subset0:amd64 (12.3.2-2+b2) ... Setting up libcairo-gobject2:amd64 (1.18.4-3+b1) ... Setting up python3.14 (3.14.8-1) ... Setting up libpangoft2-1.0-0:amd64 (1.58.2-1) ... Setting up ibus-gtk3:amd64 (1.5.35~rc1-1) ... Setting up libcups2t64:amd64 (2.4.18-1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.24.0-1) ... Setting up libpangocairo-1.0-0:amd64 (1.58.2-1) ... Setting up libpython3-stdlib:amd64 (3.14.7-3) ... Setting up libatk-bridge2.0-0t64:amd64 (2.62.1-1) ... Setting up libcurl4-gnutls:amd64 (8.22.0-1) ... Setting up mesa-libgallium:amd64 (26.1.6-1) ... Setting up libxmu6:amd64 (2:1.1.3-4+b1) ... Setting up python3.14-tk (3.14.8-1) ... Setting up libcommons-compress-java (1.27.1-2) ... Setting up libgbm1:amd64 (26.1.6-1) ... Setting up libgl1-mesa-dri:amd64 (26.1.6-1) ... Setting up python3-tk (3.14.7-3) ... Setting up dconf-service (51.0-2) ... Setting up python3 (3.14.7-3) ... Setting up libxaw7:amd64 (2:1.0.16-1+b2) ... Setting up fonts-urw-base35 (20200910-9) ... Setting up python3-freetype (2.5.1-3) ... Setting up python3-webencodings (0.5.1-6) ... Setting up python3-psutil (7.1.0-1) ... Setting up python3-zopfli (0.4.3-2) ... Setting up bowtie2 (2.5.5-1+b1) ... Setting up python3-pil:amd64 (12.3.0-1+b1) ... Setting up python3-pygments (2.20.0+dfsg-2) ... Setting up python3-packaging (26.2-3) ... Setting up python3-pyparsing (3.3.2-2) ... Setting up python3-pil.imagetk:amd64 (12.3.0-1+b1) ... Setting up python3-brotli (1.2.0-4+b1) ... Setting up python3-gi (3.58.0-1) ... Setting up python3-cycler (0.12.1-3) ... Setting up python3-kiwisolver (1.5.1-1) ... Setting up python3-uharfbuzz (0.53.3-1+b1) ... Setting up python3-typing-extensions (4.16.0-5) ... Setting up python3-html5lib (1.2-5) ... Setting up python3-numpy (1:2.4.6+ds-4+b1) ... Setting up python3-pluggy (1.6.0-2) ... Setting up python3-lxml:amd64 (6.1.3-1) ... Setting up python3-munkres (1.1.4-4) ... Setting up libhts3t64:amd64 (1.24-3) ... Setting up ncbi-vdb-data (3.4.1+dfsg-1) ... Setting up python3-dateutil (2.9.0-5) ... Setting up python3-contourpy (1.3.3-2+b1) ... Setting up python3-mpmath (1.4.1-4) ... Setting up python3-argcomplete (3.7.0-1) ... Setting up python3-cssselect (1.6.0-1) ... Setting up python3-soupsieve (2.8.4-1) ... Setting up python3-pyfaidx (0.8.1.3-2) ... Setting up python3-iniconfig (2.1.0-2) ... Setting up python3-sympy (1.14.0-6) ... Setting up python3-attr (26.1.0-1) ... Setting up python3-argh (0.31.3-2) ... Setting up libglx-mesa0:amd64 (26.1.6-1) ... Setting up python3-pysam (0.24.1+ds-2) ... Setting up python3-cairo (1.29.1-1) ... Setting up libglx0:amd64 (1.7.0-3+b1) ... Setting up dconf-gsettings-backend:amd64 (51.0-2) ... Setting up python3-joblib (1.5.3-2) ... Setting up python3-lz4 (4.4.5+dfsg-1+b1) ... Setting up python3-charset-normalizer (3.4.7-2+b1) ... Setting up python3-pytest (9.1.1-1) ... Setting up python3-olefile (0.47-1) ... Setting up bcftools (1.24-1) ... Setting up libncbi-vdb3:amd64 (3.4.1+dfsg-1) ... Setting up isympy-common (1.14.0-6) ... Setting up python3-yaml (6.0.3-1+b1) ... Setting up python3-bs4 (4.15.0-1) ... Setting up samtools (1.24-2) ... Setting up ncbi-blast+ (2.17.0+ds-7) ... Setting up libgl1:amd64 (1.7.0-3+b1) ... Setting up python3-rlpycairo (0.3.0-4) ... Setting up isympy3 (1.14.0-6) ... Setting up python3-reportlab (5.0.0-4) ... Setting up x11-utils (7.7+7) ... Setting up spades (4.0.0+really3.15.5+dfsg-3.1) ... Setting up libatk-wrapper-java (0.44.0-1) ... Setting up libgtk-3-common (3.24.52-2) ... Setting up libncbi-ngs3:amd64 (3.4.1+dfsg-2) ... Setting up gsettings-desktop-schemas (51.0-2) ... Setting up libngs-jni:amd64 (3.4.1+dfsg-2) ... Setting up python3-pybedtools (0.10.0-6+b1) ... Setting up libatk-wrapper-java-jni:amd64 (0.44.0-1+b1) ... Setting up libskia146:amd64 (146.20260602~git.3476902+dfsg-5) ... Setting up at-spi2-core (2.62.1-1) ... Setting up python3-skia-pathops (0.9.2-2) ... Setting up libngs-java:amd64 (3.4.1+dfsg-2) ... Setting up libheif-plugin-libde265:amd64 (1.23.6-2) ... Setting up node-corepack (0.35.0-2) ... Setting up node-debug (4.4.3+~4.1.13-1) ... Setting up node-llhttp (9.4.3+~cs12.11.9-2) ... Setting up python3-fonttools (4.65.0-1) ... Setting up librsvg2-2:amd64 (2.63.2+dfsg-1) ... Setting up python3-ufolib2 (0.18.1+dfsg1-2) ... Setting up node-acorn (8.17.0+ds+~cs28.27.25-1) ... Setting up node-undici (8.10.2+dfsg+~cs3.2.2-1) ... Setting up dmsetup (2:1.02.205-2+b2) ... Setting up libheif-plugin-dav1d:amd64 (1.23.6-2) ... Setting up python3-matplotlib (3.10.9+dfsg1-1+b1) ... Setting up libnode137:amd64 (24.21.0+dfsg+~cs24.13.4-1) ... Setting up libheif1:amd64 (1.23.6-2) ... Setting up nodejs (24.21.0+dfsg+~cs24.13.4-1) ... update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode Setting up node-speech-rule-engine (4.1.4+~0.1.31-2) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2+b2) ... Setting up libcryptsetup12:amd64 (2:2.8.8-1) ... Setting up glycin-loaders (2.2.2+ds-1) ... Setting up node-mathjax-full (3.2.2+~cs4.2.1-6) ... Setting up node-ms (2.1.3+~cs0.7.31-3) ... Setting up libglycin-2-0:amd64 (2.2.2+ds-1) ... Setting up node-semver (7.7.4+~cs9.7.4-2) ... Setting up libheif-plugin-x265:amd64 (1.23.6-2) ... Setting up libheif-plugin-aomenc:amd64 (1.23.6-2) ... Setting up glycin-thumbnailers (2.2.2+ds-1) ... Setting up systemd-cryptsetup (262-1) ... Setting up python-biopython-doc (1.88+dfsg-2) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.44.8+dfsg-1) ... Setting up gtk-update-icon-cache (4.24.1+ds-1) ... Setting up adwaita-icon-theme (51.0-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgtk-3-0t64:amd64 (3.24.52-2) ... Setting up librsvg2-common:amd64 (2.63.2+dfsg-1) ... Setting up libgtk-3-bin (3.24.52-2) ... Processing triggers for systemd (262-1) ... Processing triggers for libc-bin (2.43-7) ... Processing triggers for ca-certificates-java (20260311) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_BR_Root_CA_2_2023.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_2_2023.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_Server_Root_ECC_G1.pem Adding debian:OISTE_Server_Root_RSA_G1.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SECOM_TLS_ECC_Root_CA_2024.pem Adding debian:SECOM_TLS_RSA_Root_CA_2024.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_Root_CA14.pem Adding debian:SecureSign_Root_CA15.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_RSA_TLS_Root_CA_2022_-_1.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_CYBER_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem Adding debian:Telia_EC_TLS_Root_CA_v3.pem Adding debian:Telia_RSA_TLS_Root_CA_v3.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:TrustAsia_TLS_ECC_Root_CA.pem Adding debian:TrustAsia_TLS_RSA_Root_CA.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:e-Szigno_TLS_Root_CA_2023.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up openjdk-25-jre:amd64 (25.0.5~7ea-1) ... Setting up default-jre-headless (2:1.25-77) ... Setting up default-jre (2:1.25-77) ... Setting up junit4 (4.13.2-6) ... Setting up libjson-java (3.2.0+dfsg-2) ... Setting up libhtsjdk-java (5.0.0+dfsg-2) ... Setting up pilon (1.24-4) ... Setting up unicycler (0.5.1+dfsg-5) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.88+dfsg-2+b1) ... Setting up python3-gffutils (0.14-1) ... Processing triggers for ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for libgdk-pixbuf-2.0-0:amd64 (2.44.8+dfsg-1) ... Processing triggers for ca-certificates-java (20260311) ... done. 1m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', '-y', 'install', 'unicycler=0.5.1+dfsg-5'] 1m50.4s INFO: Running scripts post_install 1m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_install_exceptions'] 1m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_install_exceptions'] 1m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'systemd-tmpfiles', '--cat-config'] 1m50.4s DUMP: # /usr/lib/tmpfiles.d/20-systemd-osc-context.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. L$ /etc/profile.d/80-systemd-osc-context.sh - - - - /usr/lib/systemd/profile.d/80-systemd-osc-context.sh # /usr/lib/tmpfiles.d/20-systemd-shell-extra.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. L$ /etc/profile.d/70-systemd-shell-extra.sh - - - - /usr/lib/systemd/profile.d/70-systemd-shell-extra.sh # /usr/lib/tmpfiles.d/20-systemd-ssh-generator.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. L$ /etc/ssh/ssh_config.d/20-systemd-ssh-proxy.conf - - - - /usr/lib/systemd/ssh_config.d/20-systemd-ssh-proxy.conf d /run/sshd 0755 # /usr/lib/tmpfiles.d/20-systemd-stub.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Copy systemd-stub provided metadata such as PCR signature and public key file # from initrd into /run/, so that it will survive the initrd stage C /run/systemd/stub/profile 0444 root root - /.extra/profile C /run/systemd/stub/os-release 0444 root root - /.extra/os-release C /run/systemd/stub/boot-secret 0400 root root - /.extra/boot-secret C /run/systemd/tpm2-pcr-signature.json 0444 root root - /.extra/tpm2-pcr-signature.json C /run/systemd/tpm2-pcr-public-key.pem 0444 root root - /.extra/tpm2-pcr-public-key.pem # /usr/lib/tmpfiles.d/20-systemd-userdb.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. L /etc/ssh/sshd_config.d/20-systemd-userdb.conf - - - - /usr/lib/systemd/sshd_config.d/20-systemd-userdb.conf # /usr/lib/tmpfiles.d/20-systemd-varlink.conf # SPDX-License-Identifier: LGPL-2.1-or-later # See tmpfiles.d(5) for details. # Varlink AF_UNIX entrypoint socket inodes of relevant system services may be # linked into this directory, to make them "well-known". Typically, tools such # as the Varlink HTTP bridge expose services linked in here as public # interfaces. The symlink should be named after the Varlink interface to # expose. Interfaces that may be implemented by multiple services (such as # the generic "io.systemd.service") should not be symlinked here. d /run/varlink/registry/ 0755 root root # Socket activated services should use Symlinks= in the .socket unit file to # create these symlinks. If that's not applicable, consider creating the # symlinks via a tmpfiles.d/ snippet, like we do here, so that registration can # be influenced by the administrator. L /run/varlink/registry/io.systemd.Unit - - - - ../../systemd/io.systemd.Manager L /run/varlink/registry/io.systemd.Manager - - - - ../../systemd/io.systemd.Manager L /run/varlink/registry/io.systemd.Journal - - - - ../../systemd/journal/io.systemd.journal # /usr/lib/tmpfiles.d/credstore.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. d /etc/credstore 0700 root root d /etc/credstore.encrypted 0700 root root z /run/credstore 0700 root root z /run/credstore.encrypted 0700 root root # /usr/lib/tmpfiles.d/dbus.conf # Fields: type; path; mode; uid; gid; age; argument (symlink target) # Make ${localstatedir}/lib/dbus (required for systemd < 237) # Adjust mode and ownership if it already exists. d /var/lib/dbus 0755 - - - # Make ${localstatedir}/lib/dbus/machine-id a symlink to /etc/machine-id # if it does not already exist L /var/lib/dbus/machine-id - - - - /etc/machine-id # /usr/lib/tmpfiles.d/debian.conf # This file is part of the debianisation of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details # Type Path Mode UID GID Age Argument L /run/shm - - - - /dev/shm d /run/sendsigs.omit.d 0755 root root - d /run/lock 1777 root root - - L+ /etc/mtab - - - - ../proc/self/mounts L+ /etc/default/locale - - - - ../locale.conf L+ /etc/vconsole.conf - - - - default/keyboard C! /etc/nsswitch.conf - - - - C! /etc/pam.d - - - - C! /etc/issue - - - - # /usr/lib/tmpfiles.d/home.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. Q /home 0755 - - - q /srv 0755 - - - # /usr/lib/tmpfiles.d/journal-nocow.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Set the NOCOW attribute for directories of journal files. This flag # is inherited by their new files and sub-directories. Matters only # for btrfs filesystems. # # WARNING: Enabling the NOCOW attribute improves journal performance # substantially, but also disables the btrfs checksum logic. In # btrfs RAID filesystems the checksums are needed for rebuilding # corrupted files. Without checksums such rebuilds are not # possible. # # In a single-disk filesystem (or a filesystem without redundancy) # enabling the NOCOW attribute for journal files is safe, because # they have their own checksums and a rebuilding wouldn't be possible # in any case. h /var/log/journal - - - - +C h /var/log/journal/%m - - - - +C h /var/log/journal/remote - - - - +C # /usr/lib/tmpfiles.d/passwd.conf # If a password operation is in progress and we lose power, stale lockfiles # can be left behind. Clear them on boot. r! /etc/gshadow.lock r! /etc/shadow.lock r! /etc/passwd.lock r! /etc/group.lock r! /etc/subuid.lock r! /etc/subgid.lock # /usr/lib/tmpfiles.d/provision.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Provision additional login messages from credentials, if they are set. Note # that these lines are NOPs if the credentials are not set or if the files # already exist. f^ /etc/motd.d/50-provision.conf - - - - login.motd f^ /etc/issue.d/50-provision.conf - - - - login.issue # Provision a /etc/hosts file from credentials. f^ /etc/hosts - - - - network.hosts # Provision SSH key for root d- /root :0700 root :root - d- /root/.ssh :0700 root :root - f^ /root/.ssh/authorized_keys :0600 root :root - ssh.authorized_keys.root # /usr/lib/tmpfiles.d/systemd-network.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. d$ /run/systemd/netif 0755 systemd-network systemd-network - d$ /run/systemd/netif/links 0755 systemd-network systemd-network - d$ /run/systemd/netif/leases 0755 systemd-network systemd-network - d$ /var/lib/systemd/network 0755 systemd-network systemd-network - # /usr/lib/tmpfiles.d/systemd-nologin.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5), systemd-user-sessions.service(8) and pam_nologin(8). f+! /run/nologin 0644 - - - "System is booting up. Unprivileged users are not permitted to log in yet. Please come back later. For technical details, see pam_nologin(8)." # /usr/lib/tmpfiles.d/systemd-pstore.conf # SPDX-License-Identifier: LGPL-2.1-or-later # # The systemd-pstore.service(1) archives the contents of /sys/fs/pstore # upon boot so that there is room for a subsequent dump. This service # is enabled with: # systemctl enable systemd-pstore # # With the service enabled, the kernel still needs to be configured # to write data into the pstore. The kernel has two parameters, # crash_kexec_post_notifiers and printk.always_kmsg_dump, that # control writes into pstore. # # The crash_kexec_post_notifiers parameter enables the kernel to write # dmesg (including stack trace) into pstore upon a panic even if kdump # is loaded, only needed if you want to use pstore with kdump. Without # this parameter, kdump could block writing to pstore for stability # reason. Note this increases the risk of kdump failure even if pstore # is not available. # # The printk.always_kmsg_dump parameter enables the kernel to write dmesg # upon a normal shutdown (shutdown, reboot, halt). # # To configure the kernel parameters, uncomment the appropriate # lines below. The value written is either 'Y' to enable the # kernel parameter, or 'N' to disable the kernel parameter. # # After making a change to this file, do: # systemd-tmpfiles --create path/to/tmpfiles.d/systemd-pstore.conf # # These changes are automatically applied on future re-boots. d /var/lib/systemd/pstore 0755 root root 14d #w- /sys/module/printk/parameters/always_kmsg_dump - - - - Y #w- /sys/module/kernel/parameters/crash_kexec_post_notifiers - - - - Y # /usr/lib/tmpfiles.d/systemd-tmp.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Exclude namespace mountpoints created with PrivateTmp=yes x /tmp/systemd-private-%b-* X /tmp/systemd-private-%b-*/tmp x /var/tmp/systemd-private-%b-* X /var/tmp/systemd-private-%b-*/tmp # Remove top-level private temporary directories on each boot R! /tmp/systemd-private-* R! /var/tmp/systemd-private-* # Handle lost systemd-coredump temp files. They could be lost on old filesystems, # for example, after hard reboot. x /var/lib/systemd/coredump/.#core*.%b* r! /var/lib/systemd/coredump/.#* # /usr/lib/tmpfiles.d/systemd.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. d /run/user 0755 root root - d /run/systemd/ask-password 0755 root root - d$ /run/systemd/seats 0755 root root - d$ /run/systemd/sessions 0755 root root - d$ /run/systemd/users 0755 root root - d /run/systemd/machines 0755 root root - d$ /run/systemd/shutdown 0755 root root - d /run/systemd/dissect-root 0000 root root - d /run/systemd/report.sign 0700 root root - d /run/log 0755 root root - z /run/log/journal 2755 root systemd-journal - - Z /run/log/journal/%m ~2750 root systemd-journal - - a+ /run/log/journal - - - - d:group::r-x,d:group:adm:r-x,group::r-x,group:adm:r-x A+ /run/log/journal/%m - - - - d:group:adm:r-x,group:adm:r-X z /var/log/journal 2755 root systemd-journal - - z /var/log/journal/%m 2755 root systemd-journal - - z /var/log/journal/%m/system.journal 0640 root systemd-journal - - a+ /var/log/journal - - - - d:group::r-x,d:group:adm:r-x,group::r-x,group:adm:r-x a+ /var/log/journal/%m - - - - d:group:adm:r-x,group:adm:r-x a+ /var/log/journal/%m/system.journal - - - - group:adm:r-- d /var/lib/systemd 0755 root root - d /var/lib/systemd/coredump 0755 root root 2w # Files and directories in /var/lib/systemd/ephemeral-trees are locked by pid 1 to prevent tmpfiles from # removing them, and tmpfiles is told to clean up anything in /var/lib/systemd/ephemeral-trees that isn't # locked unconditionally. d /var/lib/systemd/ephemeral-trees 0755 root root 0 d /var/lib/private 0700 root root - d /var/log/private 0700 root root - d /var/cache/private 0700 root root - # /usr/lib/tmpfiles.d/tmp.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Clear tmp directories separately, to make them easier to override q /tmp 1777 root root 10d q /var/tmp 1777 root root 30d # /usr/lib/tmpfiles.d/tpm-udev.conf # Handle tpm mode and owers in containers z /dev/tpm[0-9]* 0660 tss root z /dev/tpmrm[0-9]* 0660 tss tss d /var/lib/tpm 0755 tss tss # /usr/lib/tmpfiles.d/tpm2-tss-fapi.conf #Type Path Mode User Group Age Argument d /var/lib/tpm2-tss/system/keystore 2775 tss tss - - a+ /var/lib/tpm2-tss/system/keystore - - - - default:group:tss:rwx d /run/tpm2-tss/eventlog 2775 tss tss - - a+ /run/tpm2-tss/eventlog - - - - default:group:tss:rwx z- /sys/kernel/security/tpm[0-9]/binary_bios_measurements 0440 root tss - - z- /sys/kernel/security/ima/binary_runtime_measurements 0440 root tss - - z- /sys/kernel/security/integrity/ima/binary_runtime_measurements 0440 root tss - - z- /sys/kernel/security/integrity/ima/binary_runtime_measurements_sha1 0440 root tss - - z- /sys/kernel/security/integrity/ima/binary_runtime_measurements_sha256 0440 root tss - - z- /sys/kernel/security/integrity/ima/binary_runtime_measurements_sha384 0440 root tss - - z- /sys/kernel/security/integrity/ima/binary_runtime_measurements_sha512 0440 root tss - - z- /sys/kernel/security/integrity/ima/ascii_runtime_measurements_sha1 0440 root tss - - z- /sys/kernel/security/integrity/ima/ascii_runtime_measurements_sha256 0440 root tss - - z- /sys/kernel/security/integrity/ima/ascii_runtime_measurements_sha384 0440 root tss - - z- /sys/kernel/security/integrity/ima/ascii_runtime_measurements_sha512 0440 root tss - - # /usr/lib/tmpfiles.d/var.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. q /var 0755 - - - L /var/run - - - - ../run d /var/log 0755 - - - d /var/cache 0755 - - - d /var/lib 0755 - - - d /var/spool 0755 - - - # /usr/lib/tmpfiles.d/x11.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Make sure these are created by default so that nobody else can # or empty them at startup D /tmp/.X11-unix 1777 root root 1h D /tmp/.ICE-unix 1777 root root 1h D /tmp/.XIM-unix 1777 root root 1h D /tmp/.font-unix 1777 root root 1h # Unlink the X11 lock files at boot, but exclude them from time-based cleanup later r! /tmp/.X[0-9]*-lock x /tmp/.X[0-9]*-lock 1m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'systemd-tmpfiles', '--cat-config'] 1m50.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 1m52.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 1m52.4s INFO: IGNORED broken symlink: /etc/vconsole.conf (flag L+ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 1m52.5s INFO: IGNORED broken symlink: /etc/default/locale (flag L+ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 1m54.8s INFO: IGNORED broken symlink: /run/varlink/registry/io.systemd.Journal (flag L systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-varlink.conf) 1m54.8s INFO: IGNORED broken symlink: /run/varlink/registry/io.systemd.Manager (flag L systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-varlink.conf) 1m54.8s INFO: IGNORED broken symlink: /run/varlink/registry/io.systemd.Unit (flag L systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-varlink.conf) 1m54.8s DEBUG: No broken symlinks as far as we can find. 1m56.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', '-ac', '--ignore-obsolete'] 2m4.7s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', '-ac', '--ignore-obsolete'] 2m4.7s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 2m4.7s DUMP: 0.17.5+b5 2m4.7s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 2m4.7s INFO: Running adequate version 0.17.5+b5 now. 2m4.7s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'unicycler'] 2m4.8s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'unicycler'] 2m4.8s INFO: Running scripts pre_remove 2m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 2m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 2m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 2m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 2m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 2m15.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 2m15.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m16.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m16.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 2m16.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 2m16.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_exceptions'] 2m16.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/pre_remove_exceptions'] 2m16.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 2m16.3s DUMP: install ok installed adwaita-icon-theme adwaita-icon-theme 51.0-1 install ok installed alsa-topology-conf alsa-topology-conf 1.2.5.1-3 install ok installed alsa-ucm-conf alsa-ucm-conf 1.2.16.1-1 install ok installed apt apt 3.3.3 install ok installed at-spi2-common at-spi2-common 2.62.1-1 install ok installed at-spi2-core at-spi2-core 2.62.1-1 install ok installed bamtools bamtools 2.5.3+dfsg-2 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed bcftools bcftools 1.24-1 install ok installed bowtie2 bowtie2 2.5.5-1+b1 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed bubblewrap bubblewrap 0.13.0-1 install ok installed bwa bwa 0.7.19-1 install ok installed ca-certificates ca-certificates 20260816 install ok installed ca-certificates-java ca-certificates-java 20260311 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed dbus dbus 1.16.2-8 install ok installed dbus-bin dbus-bin 1.16.2-8 install ok installed dbus-daemon dbus-daemon 1.16.2-8 install ok installed dbus-session-bus-common dbus-session-bus-common 1.16.2-8 install ok installed dbus-system-bus-common dbus-system-bus-common 1.16.2-8 install ok installed dbus-user-session dbus-user-session 1.16.2-8 install ok installed dconf-gsettings-backend:amd64 dconf-gsettings-backend 51.0-2 install ok installed dconf-service dconf-service 51.0-2 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed default-jre default-jre 2:1.25-77 install ok installed default-jre-headless default-jre-headless 2:1.25-77 install ok installed diffutils diffutils 1:3.12-1 install ok installed dmsetup dmsetup 2:1.02.205-2+b2 install ok installed dpkg dpkg 1.23.11 install ok installed findutils findutils 4.11.0-3 install ok installed fontconfig fontconfig 2.17.1-5 install ok installed fontconfig-config fontconfig-config 2.17.1-5 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-9 install ok installed fonts-dejavu-extra fonts-dejavu-extra 2.37-9 install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-9 install ok installed fonts-lyx fonts-lyx 2.5.3-1 install ok installed fonts-urw-base35 fonts-urw-base35 20200910-9 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-3 install ok installed gir1.2-girepository-3.0:amd64 gir1.2-girepository-3.0 2.90.1-2 install ok installed gir1.2-glib-2.0:amd64 gir1.2-glib-2.0 2.90.1-2 install ok installed glycin-loaders glycin-loaders 2.2.2+ds-1 install ok installed glycin-thumbnailers glycin-thumbnailers 2.2.2+ds-1 install ok installed grep grep 3.12-1 install ok installed gsettings-desktop-schemas gsettings-desktop-schemas 51.0-2 install ok installed gtk-update-icon-cache gtk-update-icon-cache 4.24.1+ds-1 install ok installed gzip gzip 1.14-1 install ok installed hicolor-icon-theme hicolor-icon-theme 0.18-2 install ok installed hostname hostname 3.25 install ok installed ibus-gtk3:amd64 ibus-gtk3 1.5.35~rc1-1 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed isa-support:amd64 isa-support 34 install ok installed isympy-common isympy-common 1.14.0-6 install ok installed isympy3 isympy3 1.14.0-6 install ok installed java-common java-common 0.77 install ok installed java-wrappers java-wrappers 0.5 install ok installed javascript-common javascript-common 12+nmu1 install ok installed junit4 junit4 4.13.2-6 install ok installed krb5-locales krb5-locales 1.22.1-3 install ok installed libabsl20260526:amd64 libabsl20260526 20260526.0-2+b1 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libada-url0-3:amd64 libada-url0-3 3.4.4-1+b1 install ok installed libaom3:amd64 libaom3 3.14.1-1 install ok installed libapache-pom-java libapache-pom-java 33-2 install ok installed libapparmor1:amd64 libapparmor1 4.1.8-3 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libasound2-data libasound2-data 1.2.16.1-2 install ok installed libasound2t64:amd64 libasound2t64 1.2.16.1-2 install ok installed libatk-bridge2.0-0t64:amd64 libatk-bridge2.0-0t64 2.62.1-1 install ok installed libatk-wrapper-java libatk-wrapper-java 0.44.0-1 install ok installed libatk-wrapper-java-jni:amd64 libatk-wrapper-java-jni 0.44.0-1+b1 install ok installed libatk1.0-0t64:amd64 libatk1.0-0t64 2.62.1-1 install ok installed libatomic1:amd64 libatomic1 16.2.0-3 install ok installed libatspi2.0-0t64:amd64 libatspi2.0-0t64 2.62.1-1 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b2 install ok installed libavahi-client3:amd64 libavahi-client3 0.8-18 install ok installed libavahi-common-data:amd64 libavahi-common-data 0.8-18 install ok installed libavahi-common3:amd64 libavahi-common3 0.8-18 install ok installed libavif16:amd64 libavif16 1.4.2-1 install ok installed libbamtools2.5.3:amd64 libbamtools2.5.3 2.5.3+dfsg-2 install ok installed libblas3:amd64 libblas3 3.12.1-8 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libbpf1:amd64 libbpf1 1:1.7.0-1 install ok installed libbrotli1:amd64 libbrotli1 1.2.0-4+b1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-7 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-7 install ok installed libc6:amd64 libc6 2.43-7 install ok installed libcairo-gobject2:amd64 libcairo-gobject2 1.18.4-3+b1 install ok installed libcairo2:amd64 libcairo2 1.18.4-3+b1 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1 install ok installed libcap2:amd64 libcap2 1:2.78-1+b1 install ok installed libcares2:amd64 libcares2 1.34.8-1 install ok installed libcloudproviders0:amd64 libcloudproviders0 0.4.1-1 install ok installed libcolord2:amd64 libcolord2 1.4.8-3 install ok installed libcom-err2:amd64 libcom-err2 1.47.4-1+b2 install ok installed libcommons-beanutils-java libcommons-beanutils-java 1.10.1-1.1 install ok installed libcommons-codec-java libcommons-codec-java 1.22.1-1 install ok installed libcommons-collections3-java libcommons-collections3-java 3.2.2-4 install ok installed libcommons-collections4-java libcommons-collections4-java 4.6.0-1 install ok installed libcommons-compress-java libcommons-compress-java 1.27.1-2 install ok installed libcommons-io-java libcommons-io-java 2.22.0-1 install ok installed libcommons-jexl2-java libcommons-jexl2-java 2.1.1-6 install ok installed libcommons-lang-java libcommons-lang-java 2.6-12 install ok installed libcommons-lang3-java libcommons-lang3-java 3.20.0-1 install ok installed libcommons-logging-java libcommons-logging-java 1.3.0-2 install ok installed libcommons-parent-java libcommons-parent-java 56-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libcryptsetup12:amd64 libcryptsetup12 2:2.8.8-1 install ok installed libcups2t64:amd64 libcups2t64 2.4.18-1 install ok installed libcurl4-gnutls:amd64 libcurl4-gnutls 8.22.0-1 install ok installed libdatrie1:amd64 libdatrie1 0.2.14-2 install ok installed libdav1d7:amd64 libdav1d7 1.5.4-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdbus-1-3:amd64 libdbus-1-3 1.16.2-8 install ok installed libdconf1:amd64 libdconf1 51.0-2 install ok installed libde265-0:amd64 libde265-0 1.1.3-1+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libdeflate0:amd64 libdeflate0 1.25-1 install ok installed libdevmapper1.02.1:amd64 libdevmapper1.02.1 2:1.02.205-2+b2 install ok installed libdisplay-info3:amd64 libdisplay-info3 0.3.0-1+b1 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.134-3 install ok installed libdrm-common libdrm-common 2.4.134-3 install ok installed libdrm-intel1:amd64 libdrm-intel1 2.4.134-3 install ok installed libdrm2:amd64 libdrm2 2.4.134-3 install ok installed libedit2:amd64 libedit2 3.1-20260512-1 install ok installed libedlib1:amd64 libedlib1 1.2.7-7+b2 install ok installed libelf1t64:amd64 libelf1t64 0.196-1 install ok installed libepoxy0:amd64 libepoxy0 1.5.10-2+b2 install ok installed libexpat1:amd64 libexpat1 2.9.0-1 install ok installed libezmorph-java libezmorph-java 1.0.6-4 install ok installed libffi8:amd64 libffi8 3.8.0-2 install ok installed libfontconfig1:amd64 libfontconfig1 2.17.1-5 install ok installed libfontenc1:amd64 libfontenc1 1:1.1.8-1+b3 install ok installed libfreetype6:amd64 libfreetype6 2.14.3+dfsg-3 install ok installed libfribidi0:amd64 libfribidi0 1.0.16-5+b1 install ok installed libgav1-2:amd64 libgav1-2 0.20.0-2+b2 install ok installed libgbm1:amd64 libgbm1 26.1.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.12.4-2 install ok installed libgdbm-compat4t64:amd64 libgdbm-compat4t64 1.26-1+b2 install ok installed libgdbm6t64:amd64 libgdbm6t64 1.26-1+b2 install ok installed libgdk-pixbuf-2.0-0:amd64 libgdk-pixbuf-2.0-0 2.44.8+dfsg-1 install ok installed libgdk-pixbuf2.0-common libgdk-pixbuf2.0-common 2.44.8+dfsg-1 install ok installed libgfortran5:amd64 libgfortran5 16.2.0-3 install ok installed libgif7:amd64 libgif7 6.1.3-1 install ok installed libgirepository-2.0-0:amd64 libgirepository-2.0-0 2.90.1-2 install ok installed libgl1:amd64 libgl1 1.7.0-3+b1 install ok installed libgl1-mesa-dri:amd64 libgl1-mesa-dri 26.1.6-1 install ok installed libglib2.0-0t64:amd64 libglib2.0-0t64 2.90.1-2 install ok installed libglib2.0-data libglib2.0-data 2.90.1-2 install ok installed libglvnd0:amd64 libglvnd0 1.7.0-3+b1 install ok installed libglx-mesa0:amd64 libglx-mesa0 26.1.6-1 install ok installed libglx0:amd64 libglx0 1.7.0-3+b1 install ok installed libglycin-2-0:amd64 libglycin-2-0 2.2.2+ds-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.13-1 install ok installed libgomp1:amd64 libgomp1 16.2.0-3 install ok installed libgpg-error-l10n libgpg-error-l10n 1.61-5 install ok installed libgpg-error0:amd64 libgpg-error0 1.61-5 install ok installed libgpm2:amd64 libgpm2 1.20.7-12+b2 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.15-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.22.1-3 install ok installed libgtk-3-0t64:amd64 libgtk-3-0t64 3.24.52-2 install ok installed libgtk-3-bin libgtk-3-bin 3.24.52-2 install ok installed libgtk-3-common libgtk-3-common 3.24.52-2 install ok installed libhamcrest-java libhamcrest-java 2.2-2 install ok installed libharfbuzz-subset0:amd64 libharfbuzz-subset0 12.3.2-2+b2 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 12.3.2-2+b2 install ok installed libhdr-histogram6:amd64 libhdr-histogram6 0.11.8-4+b2 install ok installed libheif-plugin-aomenc:amd64 libheif-plugin-aomenc 1.23.6-2 install ok installed libheif-plugin-dav1d:amd64 libheif-plugin-dav1d 1.23.6-2 install ok installed libheif-plugin-libde265:amd64 libheif-plugin-libde265 1.23.6-2 install ok installed libheif-plugin-x265:amd64 libheif-plugin-x265 1.23.6-2 install ok installed libheif1:amd64 libheif1 1.23.6-2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed libhts3t64:amd64 libhts3t64 1.24-3 install ok installed libhtscodecs2:amd64 libhtscodecs2 1.6.7-1 install ok installed libhtsjdk-java libhtsjdk-java 5.0.0+dfsg-2 install ok installed libhwy1t64:amd64 libhwy1t64 1.3.0-5.1 install ok installed libibus-1.0-5:amd64 libibus-1.0-5 1.5.35~rc1-1 install ok installed libice6:amd64 libice6 2:1.1.1-1+b2 install ok installed libicu78:amd64 libicu78 78.3-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.8-5 install ok installed libimagequant0:amd64 libimagequant0 4.4.1-1+b2 install ok installed libjaxen-java libjaxen-java 1.2.0-1 install ok installed libjbig0:amd64 libjbig0 2.1-6.1+b3 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:3.1.3-4 install ok installed libjs-jquery libjs-jquery 3.7.1+dfsg+~3.5.33-1 install ok installed libjs-sphinxdoc libjs-sphinxdoc 9.1.0-9 install ok installed libjson-c5:amd64 libjson-c5 0.19+ds-1 install ok installed libjson-java libjson-java 3.2.0+dfsg-2 install ok installed libjsoncpp26:amd64 libjsoncpp26 1.9.8-2 install ok installed libjxl0.11:amd64 libjxl0.11 0.11.2-5.1 install ok installed libk5crypto3:amd64 libk5crypto3 1.22.1-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-6+b2 install ok installed libkmod2:amd64 libkmod2 34.2-2+b2 install ok installed libkrb5-3:amd64 libkrb5-3 1.22.1-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.22.1-3 install ok installed liblapack3:amd64 liblapack3 3.12.1-8 install ok installed liblcms2-2:amd64 liblcms2-2 2.19.1-1 install ok installed libldap-common libldap-common 2.6.14+dfsg-2 install ok installed libldap2:amd64 libldap2 2.6.14+dfsg-2 install ok installed liblerc4:amd64 liblerc4 4.2.0+ds-1 install ok installed libllhttp9.4:amd64 libllhttp9.4 9.4.3+~cs12.11.9-2 install ok installed libllvm21:amd64 libllvm21 1:21.1.8-13 install ok installed liblmdb0:amd64 liblmdb0 0.9.35-1 install ok installed liblog4j1.2-java liblog4j1.2-java 1.2.17-11 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmbedcrypto16:amd64 libmbedcrypto16 3.6.7-3 install ok installed libmbedtls21:amd64 libmbedtls21 3.6.7-3 install ok installed libmbedx509-7:amd64 libmbedx509-7 3.6.7-3 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libncbi-ngs3:amd64 libncbi-ngs3 3.4.1+dfsg-2 install ok installed libncbi-vdb3:amd64 libncbi-vdb3 3.4.1+dfsg-1 install ok installed libncurses6:amd64 libncurses6 6.6+20260608-2 install ok installed libncursesw6:amd64 libncursesw6 6.6+20260608-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.70.0-1 install ok installed libnghttp3-9:amd64 libnghttp3-9 1.17.0-1 install ok installed libngs-java:amd64 libngs-java 3.4.1+dfsg-2 install ok installed libngs-jni:amd64 libngs-jni 3.4.1+dfsg-2 install ok installed libngtcp2-16:amd64 libngtcp2-16 1.24.0-1 install ok installed libngtcp2-crypto-gnutls8:amd64 libngtcp2-crypto-gnutls8 1.24.0-1 install ok installed libnlopt1:amd64 libnlopt1 2.11.0-2 install ok installed libnode137:amd64 libnode137 24.21.0+dfsg+~cs24.13.4-1 install ok installed libnspr4:amd64 libnspr4 2:4.40-1 install ok installed libnss-systemd:amd64 libnss-systemd 262-1 install ok installed libnss3:amd64 libnss3 2:3.131-1 install ok installed libnuma1:amd64 libnuma1 2.0.19-1+b2 install ok installed libopenjp2-7:amd64 libopenjp2-7 2.5.4-1.1 install ok installed libp11-kit0:amd64 libp11-kit0 0.26.5-1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam-systemd:amd64 libpam-systemd 262-1 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.58.2-1 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.58.2-1 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.58.2-1 install ok installed libpciaccess0:amd64 libpciaccess0 0.19-2 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-3.1 install ok installed libpcsclite1:amd64 libpcsclite1 2.5.2-1 install ok installed libperl5.42:amd64 libperl5.42 5.42.3-1 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.46.4-1+b2 install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.59-1 install ok installed libproc2-1:amd64 libproc2-1 2:4.0.7-1 install ok installed libpsl5t64:amd64 libpsl5t64 0.23.3-1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.14.7-3 install ok installed libpython3.14-minimal:amd64 libpython3.14-minimal 3.14.8-1 install ok installed libpython3.14-stdlib:amd64 libpython3.14-stdlib 3.14.8-1 install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-9 install ok installed libraqm0:amd64 libraqm0 0.10.5-1 install ok installed librav1e0.8:amd64 librav1e0.8 0.8.1-12 install ok installed libreadline8t64:amd64 libreadline8t64 8.3-4 install ok installed librhino-java librhino-java 1.7.15.1-0.1 install ok installed librsvg2-2:amd64 librsvg2-2 2.63.2+dfsg-1 install ok installed librsvg2-common:amd64 librsvg2-common 2.63.2+dfsg-1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-12 install ok installed libsasl2-modules:amd64 libsasl2-modules 2.1.28+dfsg1-12 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-12 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b1 install ok installed libselinux1:amd64 libselinux1 3.11-2.1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b1 install ok installed libsensors-config libsensors-config 1:3.6.2-2 install ok installed libsensors5:amd64 libsensors5 1:3.6.2-2+b2 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsharpyuv0:amd64 libsharpyuv0 1.6.0-0.1 install ok installed libsimdjson33:amd64 libsimdjson33 4.6.11-1 install ok installed libsimdutf35:amd64 libsimdutf35 9.3.0+really9.1.2-1 install ok installed libskia146:amd64 libskia146 146.20260602~git.3476902+dfsg-5 install ok installed libslf4j-java libslf4j-java 1.7.36-1 install ok installed libsm6:amd64 libsm6 2:1.2.6-1+b2 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libsnappy-java libsnappy-java 1.1.10.8-1 install ok installed libsnappy-jni libsnappy-jni 1.1.10.8-1 install ok installed libsnappy1v5:amd64 libsnappy1v5 1.3.1-3 install ok installed libspoa7.0.0:amd64 libspoa7.0.0 4.1.5-2 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.53.4-2 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.1-6 install ok installed libssl3t64:amd64 libssl3t64 3.6.5-1 install ok installed libssw0:amd64 libssw0 1.1-16 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-3 install ok installed libsvtav1enc4:amd64 libsvtav1enc4 4.2.0+dfsg-1 install ok installed libsystemd-shared:amd64 libsystemd-shared 262-1 install ok installed libsystemd0:amd64 libsystemd0 262-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.21.0-2+b1 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.18+dfsg-1 install ok installed libthai-data libthai-data 0.1.30-3 install ok installed libthai0:amd64 libthai0 0.1.30-3 install ok installed libtiff6:amd64 libtiff6 4.7.2-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libtk8.6:amd64 libtk8.6 8.6.18-1 install ok installed libtss2-esys-3.0.2-0t64:amd64 libtss2-esys-3.0.2-0t64 4.2.0-2 install ok installed libtss2-mu-4.0.1-0t64:amd64 libtss2-mu-4.0.1-0t64 4.2.0-2 install ok installed libtss2-rc0t64:amd64 libtss2-rc0t64 4.2.0-2 install ok installed libtss2-sys1t64:amd64 libtss2-sys1t64 4.2.0-2 install ok installed libtss2-tcti-cmd0t64:amd64 libtss2-tcti-cmd0t64 4.2.0-2 install ok installed libtss2-tcti-device0t64:amd64 libtss2-tcti-device0t64 4.2.0-2 install ok installed libtss2-tcti-mssim0t64:amd64 libtss2-tcti-mssim0t64 4.2.0-2 install ok installed libtss2-tcti-swtpm0t64:amd64 libtss2-tcti-swtpm0t64 4.2.0-2 install ok installed libudev1:amd64 libudev1 262-1 install ok installed libunistring5:amd64 libunistring5 1.4.2-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libuv1t64:amd64 libuv1t64 1.52.1-4 install ok installed libvulkan1:amd64 libvulkan1 1.4.363.0-1 install ok installed libwayland-client0:amd64 libwayland-client0 1.26.0-1 install ok installed libwayland-cursor0:amd64 libwayland-cursor0 1.26.0-1 install ok installed libwayland-egl1:amd64 libwayland-egl1 1.26.0-1 install ok installed libwebp7:amd64 libwebp7 1.6.0-0.1 install ok installed libwebpdemux2:amd64 libwebpdemux2 1.6.0-0.1 install ok installed libwebpmux3:amd64 libwebpmux3 1.6.0-0.1 install ok installed libx11-6:amd64 libx11-6 2:1.8.13-1 install ok installed libx11-data libx11-data 2:1.8.13-1 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.8.13-1 install ok installed libx265-216:amd64 libx265-216 4.2-3 install ok installed libxau6:amd64 libxau6 1:1.0.11-1+b2 install ok installed libxaw7:amd64 libxaw7 2:1.0.16-1+b2 install ok installed libxcb-dri3-0:amd64 libxcb-dri3-0 1.17.0-2+b2 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.17.0-2+b2 install ok installed libxcb-present0:amd64 libxcb-present0 1.17.0-2+b2 install ok installed libxcb-randr0:amd64 libxcb-randr0 1.17.0-2+b2 install ok installed libxcb-render0:amd64 libxcb-render0 1.17.0-2+b2 install ok installed libxcb-shape0:amd64 libxcb-shape0 1.17.0-2+b2 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.17.0-2+b2 install ok installed libxcb-sync1:amd64 libxcb-sync1 1.17.0-2+b2 install ok installed libxcb-xfixes0:amd64 libxcb-xfixes0 1.17.0-2+b2 install ok installed libxcb1:amd64 libxcb1 1.17.0-2+b2 install ok installed libxcomposite1:amd64 libxcomposite1 1:0.4.6-1+b2 install ok installed libxcursor1:amd64 libxcursor1 1:1.2.3-1+b2 install ok installed libxdamage1:amd64 libxdamage1 1:1.1.7-1+b1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.5-2+b1 install ok installed libxerces2-java libxerces2-java 2.12.2-1 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b4 install ok installed libxfixes3:amd64 libxfixes3 1:6.0.0-2+b5 install ok installed libxft2:amd64 libxft2 2.3.6-1+b5 install ok installed libxi6:amd64 libxi6 2:1.8.3-1 install ok installed libxinerama1:amd64 libxinerama1 2:1.1.4-3+b5 install ok installed libxkbcommon0:amd64 libxkbcommon0 1.13.1-1 install ok installed libxkbfile1:amd64 libxkbfile1 1:1.1.0-1+b5 install ok installed libxml-commons-external-java libxml-commons-external-java 1.4.01-6 install ok installed libxml-commons-resolver1.1-java libxml-commons-resolver1.1-java 1.2-11 install ok installed libxml2-16:amd64 libxml2-16 2.15.4+dfsg-1 install ok installed libxmu6:amd64 libxmu6 2:1.1.3-4+b1 install ok installed libxmuu1:amd64 libxmuu1 2:1.1.3-4+b1 install ok installed libxom-java libxom-java 1.4.6-1 install ok installed libxpm4:amd64 libxpm4 1:3.5.19-1 install ok installed libxrandr2:amd64 libxrandr2 2:1.5.4-1+b4 install ok installed libxrender1:amd64 libxrender1 1:0.9.12-1+b2 install ok installed libxres1:amd64 libxres1 2:1.2.1-2 install ok installed libxshmfence1:amd64 libxshmfence1 1.3.3-1+b2 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.45-0.1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1+b4 install ok installed libxt6t64:amd64 libxt6t64 1:1.2.1-1.3+b2 install ok installed libxtst6:amd64 libxtst6 2:1.2.5-1+b2 install ok installed libxv1:amd64 libxv1 2:1.0.13-1+b1 install ok installed libxxf86dga1:amd64 libxxf86dga1 2:1.1.5-1+b4 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.4-2+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libyaml-0-2:amd64 libyaml-0-2 0.2.5-2+b1 install ok installed libyuv0:amd64 libyuv0 0.0.1974.20261008-1 install ok installed libz3-4:amd64 libz3-4 4.13.3-1.1 install ok installed libzopfli1 libzopfli1 1.0.3-3 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed linux-sysctl-defaults linux-sysctl-defaults 4.17 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.3-1 install ok installed luit luit 2.0.20250912-1 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed media-types media-types 14.0.0 install ok installed mesa-libgallium:amd64 mesa-libgallium 26.1.6-1 install ok installed mesa-vulkan-drivers:amd64 mesa-vulkan-drivers 26.1.6-1 install ok installed miniasm miniasm 0.3+dfsg-4 install ok installed minimap minimap 0.2-8+b4 install ok installed mount mount 2.42.4-1 install ok installed ncbi-blast+ ncbi-blast+ 2.17.0+ds-7 install ok installed ncbi-data ncbi-data 6.1.20170106+dfsg2-7 install ok installed ncbi-vdb-data ncbi-vdb-data 3.4.1+dfsg-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed netbase netbase 6.6 install ok installed node-acorn node-acorn 8.17.0+ds+~cs28.27.25-1 install ok installed node-balanced-match node-balanced-match 2.0.0-1 install ok installed node-brace-expansion node-brace-expansion 2.1.7+~1.1.2-1 install ok installed node-commander node-commander 14.0.3-7 install ok installed node-corepack node-corepack 0.35.0-2 install ok installed node-debug node-debug 4.4.3+~4.1.13-1 install ok installed node-llhttp node-llhttp 9.4.3+~cs12.11.9-2 install ok installed node-lru-cache node-lru-cache 11.2.7-7 install ok installed node-mathjax-full node-mathjax-full 3.2.2+~cs4.2.1-6 install ok installed node-minimatch node-minimatch 9.0.7-2 install ok installed node-mj-context-menu node-mj-context-menu 0.9.1+ds-3 install ok installed node-ms node-ms 2.1.3+~cs0.7.31-3 install ok installed node-semver node-semver 7.7.4+~cs9.7.4-2 install ok installed node-speech-rule-engine node-speech-rule-engine 4.1.4+~0.1.31-2 install ok installed node-undici node-undici 8.10.2+dfsg+~cs3.2.2-1 install ok installed node-xmldom node-xmldom 0.9.12-1 install ok installed node-xtend node-xtend 4.0.2-3 install ok installed nodejs nodejs 24.21.0+dfsg+~cs24.13.4-1 install ok installed nodejs-doc nodejs-doc 24.21.0+dfsg+~cs24.13.4-1 install ok installed openjdk-25-jre:amd64 openjdk-25-jre 25.0.5~7ea-1 install ok installed openjdk-25-jre-headless:amd64 openjdk-25-jre-headless 25.0.5~7ea-1 install ok installed openssl openssl 3.6.5-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.5-1 install ok installed passwd passwd 1:4.20.3-1 install ok installed pci.ids pci.ids 0.0~2026.09.23-1 install ok installed perl perl 5.42.3-1 install ok installed perl-base perl-base 5.42.3-1 install ok installed perl-modules-5.42 perl-modules-5.42 5.42.3-1 install ok installed pilon pilon 1.24-4 install ok installed procps procps 2:4.0.7-1 install ok installed psmisc psmisc 23.7-2 install ok installed publicsuffix publicsuffix 20261007.0728-1 install ok installed python-biopython-doc python-biopython-doc 1.88+dfsg-2 install ok installed python-matplotlib-data python-matplotlib-data 3.10.9+dfsg1-1 install ok installed python3 python3 3.14.7-3 install ok installed python3-argcomplete python3-argcomplete 3.7.0-1 install ok installed python3-argh python3-argh 0.31.3-2 install ok installed python3-attr python3-attr 26.1.0-1 install ok installed python3-biopython python3-biopython 1.88+dfsg-2+b1 install ok installed python3-brotli python3-brotli 1.2.0-4+b1 install ok installed python3-bs4 python3-bs4 4.15.0-1 install ok installed python3-cairo python3-cairo 1.29.1-1 install ok installed python3-charset-normalizer python3-charset-normalizer 3.4.7-2+b1 install ok installed python3-contourpy python3-contourpy 1.3.3-2+b1 install ok installed python3-cssselect python3-cssselect 1.6.0-1 install ok installed python3-cycler python3-cycler 0.12.1-3 install ok installed python3-dateutil python3-dateutil 2.9.0-5 install ok installed python3-fonttools python3-fonttools 4.65.0-1 install ok installed python3-freetype python3-freetype 2.5.1-3 install ok installed python3-gffutils python3-gffutils 0.14-1 install ok installed python3-gi python3-gi 3.58.0-1 install ok installed python3-html5lib python3-html5lib 1.2-5 install ok installed python3-iniconfig python3-iniconfig 2.1.0-2 install ok installed python3-joblib python3-joblib 1.5.3-2 install ok installed python3-kiwisolver python3-kiwisolver 1.5.1-1 install ok installed python3-lxml:amd64 python3-lxml 6.1.3-1 install ok installed python3-lz4 python3-lz4 4.4.5+dfsg-1+b1 install ok installed python3-matplotlib python3-matplotlib 3.10.9+dfsg1-1+b1 install ok installed python3-minimal python3-minimal 3.14.7-3 install ok installed python3-mpmath python3-mpmath 1.4.1-4 install ok installed python3-munkres python3-munkres 1.1.4-4 install ok installed python3-numpy python3-numpy 1:2.4.6+ds-4+b1 install ok installed python3-numpy-dev:amd64 python3-numpy-dev 1:2.4.6+ds-4+b1 install ok installed python3-olefile python3-olefile 0.47-1 install ok installed python3-packaging python3-packaging 26.2-3 install ok installed python3-pil:amd64 python3-pil 12.3.0-1+b1 install ok installed python3-pil.imagetk:amd64 python3-pil.imagetk 12.3.0-1+b1 install ok installed python3-pluggy python3-pluggy 1.6.0-2 install ok installed python3-psutil python3-psutil 7.1.0-1 install ok installed python3-pybedtools python3-pybedtools 0.10.0-6+b1 install ok installed python3-pyfaidx python3-pyfaidx 0.8.1.3-2 install ok installed python3-pygments python3-pygments 2.20.0+dfsg-2 install ok installed python3-pyparsing python3-pyparsing 3.3.2-2 install ok installed python3-pysam python3-pysam 0.24.1+ds-2 install ok installed python3-pytest python3-pytest 9.1.1-1 install ok installed python3-reportlab python3-reportlab 5.0.0-4 install ok installed python3-rlpycairo python3-rlpycairo 0.3.0-4 install ok installed python3-skia-pathops python3-skia-pathops 0.9.2-2 install ok installed python3-soupsieve python3-soupsieve 2.8.4-1 install ok installed python3-sympy python3-sympy 1.14.0-6 install ok installed python3-tk python3-tk 3.14.7-3 install ok installed python3-typing-extensions python3-typing-extensions 4.16.0-5 install ok installed python3-ufolib2 python3-ufolib2 0.18.1+dfsg1-2 install ok installed python3-uharfbuzz python3-uharfbuzz 0.53.3-1+b1 install ok installed python3-webencodings python3-webencodings 0.5.1-6 install ok installed python3-yaml python3-yaml 6.0.3-1+b1 install ok installed python3-zopfli python3-zopfli 0.4.3-2 install ok installed python3.14 python3.14 3.14.8-1 install ok installed python3.14-minimal python3.14-minimal 3.14.8-1 install ok installed python3.14-tk python3.14-tk 3.14.8-1 install ok installed racon racon 1.5.0-4 install ok installed rampler rampler 2.1.1-1 install ok installed readline-common readline-common 8.3-4 install ok installed samtools samtools 1.24-2 install ok installed scala-library scala-library 2.11.12-6 install ok installed sed sed 4.9-3 install ok installed sgml-base sgml-base 1.31+nmu1 install ok installed shared-mime-info shared-mime-info 2.4-5+b3 install ok installed spades spades 4.0.0+really3.15.5+dfsg-3.1 install ok installed sqv sqv 1.5.0-1 install ok installed sse4.2-support sse4.2-support 34 install ok installed systemd systemd 262-1 install ok installed systemd-cryptsetup systemd-cryptsetup 262-1 install ok installed systemd-sysv systemd-sysv 262-1 install ok installed systemd-timesyncd systemd-timesyncd 262-1 install ok installed systemd-tpm systemd-tpm 262-1 install ok installed systemd-userdbd systemd-userdbd 262-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-6 install ok installed tpm-udev tpm-udev 4.2.0-2 install ok installed tzdata tzdata 2026e-1 install ok installed unicode-data unicode-data 17.0.0-2 install ok installed unicycler unicycler 0.5.1+dfsg-5 install ok installed unicycler-data unicycler-data 0.5.1+dfsg-5 install ok installed unzip unzip 6.0-31 install ok installed user-session-migration user-session-migration 0.5.2 install ok installed util-linux util-linux 2.42.4-1 install ok installed w3c-sgml-lib w3c-sgml-lib 1.3-3 install ok installed x11-common x11-common 1:7.7+26 install ok installed x11-utils x11-utils 7.7+7 install ok installed xdg-user-dirs xdg-user-dirs 0.20-1 install ok installed xfonts-encodings xfonts-encodings 1:1.0.4-2.2 install ok installed xfonts-utils xfonts-utils 1:7.7+7 install ok installed xkb-data xkb-data 2.48-1 install ok installed xml-core xml-core 0.21 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 2m16.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 2m16.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', 'remove', '--allow-remove-essential', 'adwaita-icon-theme', 'alsa-topology-conf', 'alsa-ucm-conf', 'at-spi2-common', 'at-spi2-core', 'bamtools', 'bcftools', 'bowtie2', 'bubblewrap', 'bwa', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'dmsetup', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-lyx', 'fonts-urw-base35', 'gir1.2-girepository-3.0:amd64', 'gir1.2-glib-2.0:amd64', 'glycin-loaders', 'glycin-thumbnailers', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'ibus-gtk3:amd64', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'java-wrappers', 'javascript-common', 'junit4', 'krb5-locales', 'libabsl20260526:amd64', 'libada-url0-3:amd64', 'libaom3:amd64', 'libapache-pom-java', 'libapparmor1:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libbamtools2.5.3:amd64', 'libblas3:amd64', 'libbpf1:amd64', 'libbrotli1:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcares2:amd64', 'libcloudproviders0:amd64', 'libcolord2:amd64', 'libcom-err2:amd64', 'libcommons-beanutils-java', 'libcommons-codec-java', 'libcommons-collections3-java', 'libcommons-collections4-java', 'libcommons-compress-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-parent-java', 'libcryptsetup12:amd64', 'libcups2t64:amd64', 'libcurl4-gnutls:amd64', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate0:amd64', 'libdevmapper1.02.1:amd64', 'libdisplay-info3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libedlib1:amd64', 'libelf1t64:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libezmorph-java', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgav1-2:amd64', 'libgbm1:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libgif7:amd64', 'libgirepository-2.0-0:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libglycin-2-0:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error-l10n', 'libgpg-error0:amd64', 'libgpm2:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libhamcrest-java', 'libharfbuzz-subset0:amd64', 'libharfbuzz0b:amd64', 'libhdr-histogram6:amd64', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhtsjdk-java', 'libhwy1t64:amd64', 'libibus-1.0-5:amd64', 'libice6:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libimagequant0:amd64', 'libjaxen-java', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjson-c5:amd64', 'libjson-java', 'libjsoncpp26:amd64', 'libjxl0.11:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-common', 'libldap2:amd64', 'liblerc4:amd64', 'libllhttp9.4:amd64', 'libllvm21:amd64', 'liblmdb0:amd64', 'liblog4j1.2-java', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnlopt1:amd64', 'libnode137:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libopenjp2-7:amd64', 'libp11-kit0:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.42:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libproc2-1:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libraqm0:amd64', 'librav1e0.8:amd64', 'libreadline8t64:amd64', 'librhino-java', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsharpyuv0:amd64', 'libsimdjson33:amd64', 'libsimdutf35:amd64', 'libskia146:amd64', 'libslf4j-java', 'libsm6:amd64', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libspoa7.0.0:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libssw0:amd64', 'libsvtav1enc4:amd64', 'libsystemd-shared:amd64', 'libtasn1-6:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libtss2-esys-3.0.2-0t64:amd64', 'libtss2-mu-4.0.1-0t64:amd64', 'libtss2-rc0t64:amd64', 'libtss2-sys1t64:amd64', 'libtss2-tcti-cmd0t64:amd64', 'libtss2-tcti-device0t64:amd64', 'libtss2-tcti-mssim0t64:amd64', 'libtss2-tcti-swtpm0t64:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libx265-216:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2-16:amd64', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxom-java', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxres1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyuv0:amd64', 'libz3-4:amd64', 'libzopfli1', 'linux-sysctl-defaults', 'luit', 'media-types', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'miniasm', 'minimap', 'ncbi-blast+-', 'ncbi-data', 'ncbi-vdb-data', 'netbase', 'node-acorn', 'node-balanced-match', 'node-brace-expansion', 'node-commander', 'node-corepack', 'node-debug', 'node-llhttp', 'node-lru-cache', 'node-mathjax-full', 'node-minimatch', 'node-mj-context-menu', 'node-ms', 'node-semver', 'node-speech-rule-engine', 'node-undici', 'node-xmldom', 'node-xtend', 'nodejs', 'nodejs-doc', 'openjdk-25-jre:amd64', 'openjdk-25-jre-headless:amd64', 'openssl', 'pci.ids', 'perl', 'perl-modules-5.42', 'pilon', 'procps', 'psmisc', 'publicsuffix', 'python-biopython-doc', 'python-matplotlib-data', 'python3', 'python3-argcomplete', 'python3-argh', 'python3-attr', 'python3-biopython', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-fonttools', 'python3-freetype', 'python3-gffutils', 'python3-gi', 'python3-html5lib', 'python3-iniconfig', 'python3-joblib', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-munkres', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-olefile', 'python3-packaging', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pluggy', 'python3-psutil', 'python3-pybedtools', 'python3-pyfaidx', 'python3-pygments', 'python3-pyparsing', 'python3-pysam', 'python3-pytest', 'python3-reportlab', 'python3-rlpycairo', 'python3-skia-pathops', 'python3-soupsieve', 'python3-sympy', 'python3-tk', 'python3-typing-extensions', 'python3-ufolib2', 'python3-uharfbuzz', 'python3-webencodings', 'python3-yaml', 'python3-zopfli', 'python3.14', 'python3.14-minimal', 'python3.14-tk', 'racon', 'rampler', 'readline-common', 'samtools', 'scala-library', 'sgml-base', 'shared-mime-info', 'spades', 'sse4.2-support', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 'systemd-tpm', 'systemd-userdbd', 'tpm-udev', 'unicode-data', 'unicycler-data', 'unzip', 'user-session-migration', 'w3c-sgml-lib', 'x11-common', 'x11-utils', 'xdg-user-dirs', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xml-core', 'unicycler'] 3m1.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: adwaita-icon-theme alsa-topology-conf alsa-ucm-conf at-spi2-common at-spi2-core bamtools bcftools bowtie2 bubblewrap bwa ca-certificates ca-certificates-java dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jre default-jre-headless dmsetup fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-lyx fonts-urw-base35 gir1.2-girepository-3.0 gir1.2-glib-2.0 glycin-loaders glycin-thumbnailers gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme ibus-gtk3 isa-support isympy-common isympy3 java-common java-wrappers javascript-common junit4 krb5-locales libabsl20260526 libada-url0-3 libaom3 libapache-pom-java libapparmor1 libasound2-data libasound2t64 libatk-bridge2.0-0t64 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0t64 libatomic1 libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libavif16 libbamtools2.5.3 libblas3 libbpf1 libbrotli1 libcairo-gobject2 libcairo2 libcap2 libcares2 libcloudproviders0 libcolord2 libcom-err2 libcommons-beanutils-java libcommons-codec-java libcommons-collections3-java libcommons-collections4-java libcommons-compress-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-lang3-java libcommons-logging-java libcommons-parent-java libcryptsetup12 libcups2t64 libcurl4-gnutls libdatrie1 libdav1d7 libdbus-1-3 libdconf1 libde265-0 libdeflate0 libdevmapper1.02.1 libdisplay-info3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm2 libedit2 libedlib1 libelf1t64 libepoxy0 libexpat1 libezmorph-java libffi8 libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgav1-2 libgbm1 libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libgif7 libgirepository-2.0-0 libgl1 libgl1-mesa-dri libglib2.0-0t64 libglib2.0-data libglvnd0 libglx-mesa0 libglx0 libglycin-2-0 libgnutls30t64 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-bin libgtk-3-common libhamcrest-java libharfbuzz-subset0 libharfbuzz0b libhdr-histogram6 libheif-plugin-aomenc libheif-plugin-dav1d libheif-plugin-libde265 libheif-plugin-x265 libheif1 libhts3t64 libhtscodecs2 libhtsjdk-java libhwy1t64 libibus-1.0-5 libice6 libicu78 libidn2-0 libimagequant0 libjaxen-java libjbig0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc libjson-c5 libjson-java libjsoncpp26 libjxl0.11 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-common libldap2 liblerc4 libllhttp9.4 libllvm21 liblmdb0 liblog4j1.2-java libmbedcrypto16 libmbedtls21 libmbedx509-7 libncbi-ngs3 libncbi-vdb3 libncurses6 libncursesw6 libnghttp2-14 libnghttp3-9 libngs-java libngs-jni libngtcp2-16 libngtcp2-crypto-gnutls8 libnlopt1 libnode137 libnspr4 libnss-systemd libnss3 libnuma1 libopenjp2-7 libp11-kit0 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libperl5.42 libpixman-1-0 libpng16-16t64 libproc2-1 libpsl5t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libqhull-r8.0 libraqm0 librav1e0.8 libreadline8t64 librhino-java librsvg2-2 librsvg2-common libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libsharpyuv0 libsimdjson33 libsimdutf35 libskia146 libslf4j-java libsm6 libsnappy-java libsnappy-jni libsnappy1v5 libspoa7.0.0 libsqlite3-0 libssh2-1t64 libssw0 libsvtav1enc4 libsystemd-shared libtasn1-6 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libtss2-esys-3.0.2-0t64 libtss2-mu-4.0.1-0t64 libtss2-rc0t64 libtss2-sys1t64 libtss2-tcti-cmd0t64 libtss2-tcti-device0t64 libtss2-tcti-mssim0t64 libtss2-tcti-swtpm0t64 libunistring5 libuv1t64 libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-xcb1 libx265-216 libxau6 libxaw7 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxkbfile1 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2-16 libxmu6 libxmuu1 libxom-java libxpm4 libxrandr2 libxrender1 libxres1 libxshmfence1 libxslt1.1 libxss1 libxt6t64 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 libyaml-0-2 libyuv0 libz3-4 libzopfli1 linux-sysctl-defaults luit media-types mesa-libgallium mesa-vulkan-drivers miniasm minimap ncbi-blast+ ncbi-data ncbi-vdb-data netbase node-acorn node-balanced-match node-brace-expansion node-commander node-corepack node-debug node-llhttp node-lru-cache node-mathjax-full node-minimatch node-mj-context-menu node-ms node-semver node-speech-rule-engine node-undici node-xmldom node-xtend nodejs nodejs-doc openjdk-25-jre openjdk-25-jre-headless openssl pci.ids perl perl-modules-5.42 pilon procps psmisc publicsuffix python-biopython-doc python-matplotlib-data python3 python3-argcomplete python3-argh python3-attr python3-biopython python3-brotli python3-bs4 python3-cairo python3-charset-normalizer python3-contourpy python3-cssselect python3-cycler python3-dateutil python3-fonttools python3-freetype python3-gffutils python3-gi python3-html5lib python3-iniconfig python3-joblib python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib python3-minimal python3-mpmath python3-munkres python3-numpy python3-numpy-dev python3-olefile python3-packaging python3-pil python3-pil.imagetk python3-pluggy python3-psutil python3-pybedtools python3-pyfaidx python3-pygments python3-pyparsing python3-pysam python3-pytest python3-reportlab python3-rlpycairo python3-skia-pathops python3-soupsieve python3-sympy python3-tk python3-typing-extensions python3-ufolib2 python3-uharfbuzz python3-webencodings python3-yaml python3-zopfli python3.14 python3.14-minimal python3.14-tk racon rampler readline-common samtools scala-library sgml-base shared-mime-info spades sse4.2-support systemd systemd-cryptsetup systemd-sysv systemd-timesyncd systemd-tpm systemd-userdbd tpm-udev unicode-data unicycler unicycler-data unzip user-session-migration w3c-sgml-lib x11-common x11-utils xdg-user-dirs xfonts-encodings xfonts-utils xkb-data xml-core WARNING: The following essential packages will be removed. This should NOT be done unless you know exactly what you are doing! systemd-sysv systemd (due to systemd-sysv) 0 upgraded, 0 newly installed, 442 to remove and 0 not upgraded. After this operation, 1728 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 37490 files and directories currently installed.) Removing unicycler (0.5.1+dfsg-5) ... Removing pilon (1.24-4) ... Removing default-jre (2:1.25-77) ... Removing openjdk-25-jre:amd64 (25.0.5~7ea-1) ... Removing libgtk-3-bin (3.24.52-2) ... Removing libgtk-3-0t64:amd64 (3.24.52-2) ... Removing adwaita-icon-theme (51.0-1) ... Removing alsa-topology-conf (1.2.5.1-3) ... Removing alsa-ucm-conf (1.2.16.1-1) ... Removing at-spi2-core (2.62.1-1) ... Removing libatk-wrapper-java-jni:amd64 (0.44.0-1+b1) ... Removing spades (4.0.0+really3.15.5+dfsg-3.1) ... Removing bamtools (2.5.3+dfsg-2) ... Removing bcftools (1.24-1) ... Removing bowtie2 (2.5.5-1+b1) ... Removing librsvg2-common:amd64 (2.63.2+dfsg-1) ... dpkg: warning: while removing librsvg2-common:amd64, directory '/usr/lib/x86_64-linux-gnu/gdk-pixbuf-2.0/2.10.0' not empty so not removed Removing bwa (0.7.19-1) ... Removing libhtsjdk-java (5.0.0+dfsg-2) ... Removing libjson-java (3.2.0+dfsg-2) ... Removing junit4 (4.13.2-6) ... Removing default-jre-headless (2:1.25-77) ... Removing openjdk-25-jre-headless:amd64 (25.0.5~7ea-1) ... Removing ca-certificates-java (20260311) ... Removing ca-certificates (20260816) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libgtk-3-common (3.24.52-2) ... Removing gsettings-desktop-schemas (51.0-2) ... Removing dconf-gsettings-backend:amd64 (51.0-2) ... Removing dconf-service (51.0-2) ... Removing dbus-user-session (1.16.2-8) ... Removing libpam-systemd:amd64 (262-1) ... Removing dbus (1.16.2-8) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing dbus-daemon (1.16.2-8) ... Removing dbus-bin (1.16.2-8) ... Removing dbus-session-bus-common (1.16.2-8) ... Removing dbus-system-bus-common (1.16.2-8) ... Removing systemd-cryptsetup (262-1) ... Removing libcryptsetup12:amd64 (2:2.8.8-1) ... Removing ibus-gtk3:amd64 (1.5.35~rc1-1) ... dpkg: warning: while removing ibus-gtk3:amd64, directory '/usr/lib/x86_64-linux-gnu/gtk-3.0/3.0.0' not empty so not removed Removing libatk-wrapper-java (0.44.0-1) ... Removing x11-utils (7.7+7) ... Removing python3-gffutils (0.14-1) ... Removing python3-biopython (1.88+dfsg-2+b1) ... Removing python3-reportlab (5.0.0-4) ... Removing python3-skia-pathops (0.9.2-2) ... Removing libskia146:amd64 (146.20260602~git.3476902+dfsg-5) ... Removing python3-matplotlib (3.10.9+dfsg1-1+b1) ... Removing python-matplotlib-data (3.10.9+dfsg1-1) ... Removing fonts-dejavu-extra (2.37-9) ... Removing fonts-lyx (2.5.3-1) ... Removing fonts-urw-base35 (20200910-9) ... Removing python3-gi (3.58.0-1) ... Removing gir1.2-girepository-3.0:amd64 (2.90.1-2) ... Removing gir1.2-glib-2.0:amd64 (2.90.1-2) ... Removing gtk-update-icon-cache (4.24.1+ds-1) ... Removing hicolor-icon-theme (0.18-2) ... Removing ncbi-blast+ (2.17.0+ds-7) ... Removing sse4.2-support (34) ... Removing isa-support:amd64 (34) ... Removing isympy3 (1.14.0-6) ... Removing isympy-common (1.14.0-6) ... Removing java-common (0.77) ... Removing java-wrappers (0.5) ... Removing javascript-common (12+nmu1) ... Removing krb5-locales (1.22.1-3) ... Removing python-biopython-doc (1.88+dfsg-2) ... Removing node-mathjax-full (3.2.2+~cs4.2.1-6) ... Removing node-speech-rule-engine (4.1.4+~0.1.31-2) ... Removing libheif-plugin-aomenc:amd64 (1.23.6-2) ... Removing libslf4j-java (1.7.36-1) ... Removing libcommons-jexl2-java (2.1.1-6) ... Removing libcommons-lang3-java (3.20.0-1) ... Removing libapparmor1:amd64 (4.1.8-3) ... Removing libasound2t64:amd64 (1.2.16.1-2) ... Removing libasound2-data (1.2.16.1-2) ... Removing libatk-bridge2.0-0t64:amd64 (2.62.1-1) ... Removing user-session-migration (0.5.2) ... Removing libatspi2.0-0t64:amd64 (2.62.1-1) ... Removing libcups2t64:amd64 (2.4.18-1) ... Removing libavahi-client3:amd64 (0.8-18) ... Removing libavahi-common3:amd64 (0.8-18) ... Removing libavahi-common-data:amd64 (0.8-18) ... Removing libbamtools2.5.3:amd64 (2.5.3+dfsg-2) ... Removing python3-pybedtools (0.10.0-6+b1) ... Removing python3-contourpy (1.3.3-2+b1) ... Removing python3-numpy (1:2.4.6+ds-4+b1) ... Removing liblapack3:amd64 (3.12.1-8) ... Removing libblas3:amd64 (3.12.1-8) ... Removing libbpf1:amd64 (1:1.7.0-1) ... Removing libheif-plugin-x265:amd64 (1.23.6-2) ... Removing python3-rlpycairo (0.3.0-4) ... Removing python3-cairo (1.29.1-1) ... Removing libcloudproviders0:amd64 (0.4.1-1) ... Removing libcolord2:amd64 (1.4.8-3) ... Removing samtools (1.24-2) ... Removing python3-pysam (0.24.1+ds-2) ... Removing libhts3t64:amd64 (1.24-3) ... Removing libcurl4-gnutls:amd64 (8.22.0-1) ... Removing libgssapi-krb5-2:amd64 (1.22.1-3) ... Removing libkrb5-3:amd64 (1.22.1-3) ... Removing libcom-err2:amd64 (1.47.4-1+b2) ... Removing libcommons-beanutils-java (1.10.1-1.1) ... Removing libcommons-compress-java (1.27.1-2) ... Removing libcommons-codec-java (1.22.1-1) ... Removing libcommons-collections3-java (3.2.2-4) ... Removing libcommons-collections4-java (4.6.0-1) ... Removing libcommons-io-java (2.22.0-1) ... Removing libcommons-lang-java (2.6-12) ... Removing libdbus-1-3:amd64 (1.16.2-8) ... Removing libdconf1:amd64 (51.0-2) ... Removing mesa-vulkan-drivers:amd64 (26.1.6-1) ... Removing libdisplay-info3:amd64 (0.3.0-1+b1) ... Removing libgl1:amd64 (1.7.0-3+b1) ... Removing libglx0:amd64 (1.7.0-3+b1) ... Removing libglx-mesa0:amd64 (26.1.6-1) ... Removing libgl1-mesa-dri:amd64 (26.1.6-1) ... Removing libgbm1:amd64 (26.1.6-1) ... Removing mesa-libgallium:amd64 (26.1.6-1) ... Removing libdrm-amdgpu1:amd64 (2.4.134-3) ... Removing libdrm-intel1:amd64 (2.4.134-3) ... Removing libdrm2:amd64 (2.4.134-3) ... Removing libdrm-common (2.4.134-3) ... Removing libllvm21:amd64 (1:21.1.8-13) ... Removing libedit2:amd64 (3.1-20260512-1) ... Removing racon (1.5.0-4) ... Removing libedlib1:amd64 (1.2.7-7+b2) ... Removing libelf1t64:amd64 (0.196-1) ... Removing libepoxy0:amd64 (1.5.10-2+b2) ... Removing python3-yaml (6.0.3-1+b1) ... Removing python3-bs4 (4.15.0-1) ... Removing python3-soupsieve (2.8.4-1) ... Removing libezmorph-java (1.0.6-4) ... Removing libwayland-cursor0:amd64 (1.26.0-1) ... Removing libwayland-client0:amd64 (1.26.0-1) ... Removing xfonts-utils (1:7.7+7) ... Removing libfontenc1:amd64 (1:1.1.8-1+b3) ... Removing perl (5.42.3-1) ... Removing libperl5.42:amd64 (5.42.3-1) ... Removing libgdbm-compat4t64:amd64 (1.26-1+b2) ... Removing libgdbm6t64:amd64 (1.26-1+b2) ... Removing libgfortran5:amd64 (16.2.0-3) ... Removing libgif7:amd64 (6.1.3-1) ... Removing libgirepository-2.0-0:amd64 (2.90.1-2) ... Removing libglib2.0-data (2.90.1-2) ... Removing libglvnd0:amd64 (1.7.0-3+b1) ... Removing libngtcp2-crypto-gnutls8:amd64 (1.24.0-1) ... Removing libgnutls30t64:amd64 (3.8.13-1) ... Removing libgomp1:amd64 (16.2.0-3) ... Removing libgpg-error-l10n (1.61-5) ... Removing libgpm2:amd64 (1.20.7-12+b2) ... Removing libhamcrest-java (2.2-2) ... Removing libhtscodecs2:amd64 (1.6.7-1) ... Removing libibus-1.0-5:amd64 (1.5.35~rc1-1) ... Removing libxaw7:amd64 (2:1.0.16-1+b2) ... Removing libxmu6:amd64 (2:1.1.3-4+b1) ... Removing libxt6t64:amd64 (1:1.2.1-1.3+b2) ... Removing libsm6:amd64 (2:1.2.6-1+b2) ... Removing libice6:amd64 (2:1.1.1-1+b2) ... Removing libpsl5t64:amd64 (0.23.3-1) ... Removing libidn2-0:amd64 (2.3.8-5) ... Removing libxom-java (1.4.6-1) ... Removing libjaxen-java (1.2.0-1) ... Removing libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... Removing libjs-sphinxdoc (9.1.0-9) ... Removing libjson-c5:amd64 (0.19+ds-1) ... Removing libjsoncpp26:amd64 (1.9.8-2) ... Removing libk5crypto3:amd64 (1.22.1-3) ... Removing libkeyutils1:amd64 (1.6.3-6+b2) ... Removing libkmod2:amd64 (34.2-2+b2) ... Removing libkrb5support0:amd64 (1.22.1-3) ... Removing libldap-common (2.6.14+dfsg-2) ... Removing libldap2:amd64 (2.6.14+dfsg-2) ... Removing liblmdb0:amd64 (0.9.35-1) ... Removing liblog4j1.2-java (1.2.17-11) ... Removing libngs-java:amd64 (3.4.1+dfsg-2) ... Removing libngs-jni:amd64 (3.4.1+dfsg-2) ... Removing libncbi-ngs3:amd64 (3.4.1+dfsg-2) ... Removing libncbi-vdb3:amd64 (3.4.1+dfsg-1) ... Removing libmbedtls21:amd64 (3.6.7-3) ... Removing libmbedx509-7:amd64 (3.6.7-3) ... Removing libmbedcrypto16:amd64 (3.6.7-3) ... Removing libncurses6:amd64 (6.6+20260608-2) ... Removing python3-joblib (1.5.3-2) ... Removing procps (2:4.0.7-1) ... Removing libnghttp3-9:amd64 (1.17.0-1) ... Removing libngtcp2-16:amd64 (1.24.0-1) ... Removing libnlopt1:amd64 (2.11.0-2) ... Removing libnss3:amd64 (2:3.131-1) ... Removing libnspr4:amd64 (2:4.40-1) ... Removing systemd-userdbd (262-1) ... Removing libnss-systemd:amd64 (262-1) ... Removing libx265-216:amd64 (4.2-3) ... Removing libnuma1:amd64 (2.0.19-1+b2) ... Removing libp11-kit0:amd64 (0.26.5-1) ... Removing libpciaccess0:amd64 (0.19-2) ... Removing libpcsclite1:amd64 (2.5.2-1) ... Removing libproc2-1:amd64 (2:4.0.7-1) ... Removing libqhull-r8.0:amd64 (2020.2-9) ... Removing librhino-java (1.7.15.1-0.1) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-12) ... Removing libsasl2-modules:amd64 (2.1.28+dfsg1-12) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-12) ... Removing libsensors5:amd64 (1:3.6.2-2+b2) ... Removing libsensors-config (1:3.6.2-2) ... Removing libsnappy-java (1.1.10.8-1) ... Removing libsnappy-jni (1.1.10.8-1) ... Removing libsnappy1v5:amd64 (1.3.1-3) ... Removing libspoa7.0.0:amd64 (4.1.5-2) ... Removing libssh2-1t64:amd64 (1.11.1-6) ... Removing libssw0:amd64 (1.1-16) ... Removing systemd-tpm (262-1) ... Removing tpm-udev (4.2.0-2) ... Removing systemd-timesyncd (262-1) ... Removing libtasn1-6:amd64 (4.21.0-2+b1) ... Removing libtss2-esys-3.0.2-0t64:amd64 (4.2.0-2) ... Removing libtss2-tcti-swtpm0t64:amd64 (4.2.0-2) ... Removing libtss2-tcti-mssim0t64:amd64 (4.2.0-2) ... Removing libtss2-rc0t64:amd64 (4.2.0-2) ... Removing libtss2-sys1t64:amd64 (4.2.0-2) ... Removing libtss2-tcti-cmd0t64:amd64 (4.2.0-2) ... Removing libtss2-tcti-device0t64:amd64 (4.2.0-2) ... Removing libunistring5:amd64 (1.4.2-1) ... Removing libvulkan1:amd64 (1.4.363.0-1) ... Removing libwayland-egl1:amd64 (1.26.0-1) ... Removing libxxf86vm1:amd64 (1:1.1.4-2+b1) ... Removing libxxf86dga1:amd64 (2:1.1.5-1+b4) ... Removing libx11-xcb1:amd64 (2:1.8.13-1) ... Removing libxcb-xfixes0:amd64 (1.17.0-2+b2) ... Removing libxcb-sync1:amd64 (1.17.0-2+b2) ... Removing libxcb-dri3-0:amd64 (1.17.0-2+b2) ... Removing libxcb-glx0:amd64 (1.17.0-2+b2) ... Removing libxcb-present0:amd64 (1.17.0-2+b2) ... Removing libxcb-randr0:amd64 (1.17.0-2+b2) ... Removing libxcb-shape0:amd64 (1.17.0-2+b2) ... Removing libxcomposite1:amd64 (1:0.4.6-1+b2) ... Removing libxcursor1:amd64 (1:1.2.3-1+b2) ... Removing libxdamage1:amd64 (1:1.1.7-1+b1) ... Removing libxerces2-java (2.12.2-1) ... Removing libxv1:amd64 (2:1.0.13-1+b1) ... Removing libxfixes3:amd64 (1:6.0.0-2+b5) ... Removing libxi6:amd64 (2:1.8.3-1) ... Removing libxinerama1:amd64 (2:1.1.4-3+b5) ... Removing libxkbcommon0:amd64 (1.13.1-1) ... Removing libxkbfile1:amd64 (1:1.1.0-1+b5) ... Removing libxml-commons-external-java (1.4.01-6) ... Removing libxml-commons-resolver1.1-java (1.2-11) ... Removing libxmuu1:amd64 (2:1.1.3-4+b1) ... Removing libxpm4:amd64 (1:3.5.19-1) ... Removing libxrandr2:amd64 (2:1.5.4-1+b4) ... Removing libxres1:amd64 (2:1.2.1-2) ... Removing libxshmfence1:amd64 (1.3.3-1+b2) ... Removing libxtst6:amd64 (2:1.2.5-1+b2) ... Removing libyaml-0-2:amd64 (0.2.5-2+b1) ... Removing libz3-4:amd64 (4.13.3-1.1) ... Removing linux-sysctl-defaults (4.17) ... Removing luit (2.0.20250912-1) ... Removing 'diversion of /usr/bin/luit to /usr/bin/luit.x11-utils by luit' Removing 'diversion of /usr/share/man/man1/luit.1.gz to /usr/share/man/man1/luit.x11-utils.1.gz by luit' Removing miniasm (0.3+dfsg-4) ... Removing minimap (0.2-8+b4) ... Removing ncbi-data (6.1.20170106+dfsg2-7) ... Removing ncbi-vdb-data (3.4.1+dfsg-1) ... Removing node-commander (14.0.3-7) ... Removing node-mj-context-menu (0.9.1+ds-3) ... Removing node-xmldom (0.9.12-1) ... Removing nodejs-doc (24.21.0+dfsg+~cs24.13.4-1) ... Removing openssl (3.6.5-1) ... Removing pci.ids (0.0~2026.09.23-1) ... Removing perl-modules-5.42 (5.42.3-1) ... Removing psmisc (23.7-2) ... Removing publicsuffix (20261007.0728-1) ... Removing python3-argcomplete (3.7.0-1) ... Removing python3-argh (0.31.3-2) ... Removing python3-charset-normalizer (3.4.7-2+b1) ... Removing python3-cssselect (1.6.0-1) ... Removing python3-cycler (0.12.1-3) ... Removing python3-dateutil (2.9.0-5) ... Removing python3-freetype (2.5.1-3) ... Removing python3-html5lib (1.2-5) ... Removing python3-pytest (9.1.1-1) ... Removing python3-iniconfig (2.1.0-2) ... Removing python3-kiwisolver (1.5.1-1) ... Removing python3-numpy-dev:amd64 (1:2.4.6+ds-4+b1) ... Removing python3-olefile (0.47-1) ... Removing python3-pyfaidx (0.8.1.3-2) ... Removing python3-packaging (26.2-3) ... Removing python3-pluggy (1.6.0-2) ... Removing python3-psutil (7.1.0-1) ... Removing python3-pygments (2.20.0+dfsg-2) ... Removing python3-pyparsing (3.3.2-2) ... Removing python3-typing-extensions (4.16.0-5) ... Removing python3-webencodings (0.5.1-6) ... Removing rampler (2.1.1-1) ... Removing scala-library (2.11.12-6) ... Removing w3c-sgml-lib (1.3-3) ... Removing xml-core (0.21) ... Removing sgml-base (1.31+nmu1) ... dpkg: warning: overriding problem because --force enabled: dpkg: warning: this is a protected package; it should not be removed Removing systemd-sysv (262-1) ... Removing unicycler-data (0.5.1+dfsg-5) ... Removing unzip (6.0-31) ... Removing xfonts-encodings (1:1.0.4-2.2) ... Removing xdg-user-dirs (0.20-1) ... Removing xkb-data (2.48-1) ... Removing libatk1.0-0t64:amd64 (2.62.1-1) ... Removing at-spi2-common (2.62.1-1) ... Removing python3-pil.imagetk:amd64 (12.3.0-1+b1) ... Removing python3-tk (3.14.7-3) ... Removing python3.14-tk (3.14.8-1) ... Removing libtk8.6:amd64 (8.6.18-1) ... Removing libxft2:amd64 (2.3.6-1+b5) ... Removing libcommons-logging-java (1.3.0-2) ... Removing libcommons-parent-java (56-1) ... Removing libapache-pom-java (33-2) ... Removing systemd (262-1) ... Removing libsystemd-shared:amd64 (262-1) ... Removing libtcl8.6:amd64 (8.6.18+dfsg-1) ... Removing libtss2-mu-4.0.1-0t64:amd64 (4.2.0-2) ... Removing libxss1:amd64 (1:1.2.3-1+b4) ... Removing x11-common (1:7.7+26) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing python3-pil:amd64 (12.3.0-1+b1) ... Removing libavif16:amd64 (1.4.2-1) ... Removing libgav1-2:amd64 (0.20.0-2+b2) ... Removing libabsl20260526:amd64 (20260526.0-2+b1) ... Removing libaom3:amd64 (3.14.1-1) ... Removing libtiff6:amd64 (4.7.2-1) ... Removing libdeflate0:amd64 (1.25-1) ... Removing libraqm0:amd64 (0.10.5-1) ... Removing libimagequant0:amd64 (4.4.1-1+b2) ... Removing libjbig0:amd64 (2.1-6.1+b3) ... Removing libyuv0:amd64 (0.0.1974.20261008-1) ... Removing libjpeg62-turbo:amd64 (1:3.1.3-4) ... Removing liblerc4:amd64 (4.2.0+ds-1) ... Removing libopenjp2-7:amd64 (2.5.4-1.1) ... Removing librav1e0.8:amd64 (0.8.1-12) ... Removing libwebpmux3:amd64 (1.6.0-0.1) ... Removing libwebpdemux2:amd64 (1.6.0-0.1) ... Removing libwebp7:amd64 (1.6.0-0.1) ... Removing libsvtav1enc4:amd64 (4.2.0+dfsg-1) ... Removing node-acorn (8.17.0+ds+~cs28.27.25-1) ... Removing node-xtend (4.0.2-3) ... Removing librsvg2-2:amd64 (2.63.2+dfsg-1) ... Removing libgdk-pixbuf-2.0-0:amd64 (2.44.8+dfsg-1) ... Removing dmsetup (2:1.02.205-2+b2) ... Removing libdevmapper1.02.1:amd64 (2:1.02.205-2+b2) ... Removing libpangocairo-1.0-0:amd64 (1.58.2-1) ... Removing libpangoft2-1.0-0:amd64 (1.58.2-1) ... Removing libpango-1.0-0:amd64 (1.58.2-1) ... Removing fontconfig (2.17.1-5) ... Removing nodejs (24.21.0+dfsg+~cs24.13.4-1) ... Removing shared-mime-info (2.4-5+b3) ... Removing libcairo-gobject2:amd64 (1.18.4-3+b1) ... Removing libthai0:amd64 (0.1.30-3) ... Removing libdatrie1:amd64 (0.2.14-2) ... Removing python3-ufolib2 (0.18.1+dfsg1-2) ... Removing libfribidi0:amd64 (1.0.16-5+b1) ... Removing libgdk-pixbuf2.0-common (2.44.8+dfsg-1) ... Removing libthai-data (0.1.30-3) ... Removing node-corepack (0.35.0-2) ... Removing python3-attr (26.1.0-1) ... Removing glycin-thumbnailers (2.2.2+ds-1) ... Removing libnode137:amd64 (24.21.0+dfsg+~cs24.13.4-1) ... Removing node-undici (8.10.2+dfsg+~cs3.2.2-1) ... Removing node-llhttp (9.4.3+~cs12.11.9-2) ... Removing node-semver (7.7.4+~cs9.7.4-2) ... Removing libada-url0-3:amd64 (3.4.4-1+b1) ... Removing libcares2:amd64 (1.34.8-1) ... Removing python3-fonttools (4.65.0-1) ... Removing python3-uharfbuzz (0.53.3-1+b1) ... Removing python3-sympy (1.14.0-6) ... Removing libharfbuzz-subset0:amd64 (12.3.2-2+b2) ... Removing libharfbuzz0b:amd64 (12.3.2-2+b2) ... Removing python3-lxml:amd64 (6.1.3-1) ... Removing libxslt1.1:amd64 (1.1.45-0.1) ... Removing libgcrypt20:amd64 (1.12.4-2) ... Removing libglycin-2-0:amd64 (2.2.2+ds-1) ... Removing libgpg-error0:amd64 (1.61-5) ... Removing libgraphite2-3:amd64 (1.3.15-2) ... Removing libhdr-histogram6:amd64 (0.11.8-4+b2) ... Removing libicu78:amd64 (78.3-2) ... Removing libllhttp9.4:amd64 (9.4.3+~cs12.11.9-2) ... Removing libnghttp2-14:amd64 (1.70.0-1) ... Removing libsimdjson33:amd64 (4.6.11-1) ... Removing libsimdutf35:amd64 (9.3.0+really9.1.2-1) ... Removing libuv1t64:amd64 (1.52.1-4) ... Removing libxml2-16:amd64 (2.15.4+dfsg-1) ... Removing python3-zopfli (0.4.3-2) ... Removing libzopfli1 (1.0.3-3) ... Removing node-minimatch (9.0.7-2) ... Removing node-brace-expansion (2.1.7+~1.1.2-1) ... Removing node-balanced-match (2.0.0-1) ... Removing node-debug (4.4.3+~4.1.13-1) ... Removing node-lru-cache (11.2.7-7) ... Removing node-ms (2.1.3+~cs0.7.31-3) ... Removing python3-brotli (1.2.0-4+b1) ... Removing python3-lz4 (4.4.5+dfsg-1+b1) ... Removing python3-mpmath (1.4.1-4) ... Removing python3-munkres (1.1.4-4) ... Removing unicode-data (17.0.0-2) ... Removing glycin-loaders (2.2.2+ds-1) ... Removing bubblewrap (0.13.0-1) ... Removing libglib2.0-0t64:amd64 (2.90.1-2) ... Removing libatomic1:amd64 (16.2.0-3) ... Removing libheif1:amd64 (1.23.6-2) ... Removing libjxl0.11:amd64 (0.11.2-5.1) ... Removing libcairo2:amd64 (1.18.4-3+b1) ... Removing libcap2:amd64 (1:2.78-1+b1) ... Removing libheif-plugin-dav1d:amd64 (1.23.6-2) ... Removing libdav1d7:amd64 (1.5.4-1) ... Removing python3 (3.14.7-3) ... Removing python3.14 (3.14.8-1) ... Removing python3-minimal (3.14.7-3) ... Removing python3.14-minimal (3.14.8-1) ... Removing libpython3-stdlib:amd64 (3.14.7-3) ... Removing libpython3.14-stdlib:amd64 (3.14.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libffi8:amd64 (3.8.0-2) ... Removing libhwy1t64:amd64 (1.3.0-5.1) ... Removing liblcms2-2:amd64 (2.19.1-1) ... Removing libncursesw6:amd64 (6.6+20260608-2) ... Removing libpixman-1-0:amd64 (0.46.4-1+b2) ... Removing libpython3.14-minimal:amd64 (3.14.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.3-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsharpyuv0:amd64 (1.6.0-0.1) ... Removing libsqlite3-0:amd64 (3.53.4-2) ... Removing libxcb-render0:amd64 (1.17.0-2+b2) ... Removing libxcb-shm0:amd64 (1.17.0-2+b2) ... Removing libxext6:amd64 (2:1.3.4-1+b4) ... Removing libxrender1:amd64 (1:0.9.12-1+b2) ... Removing media-types (14.0.0) ... Removing netbase (6.6) ... Removing readline-common (8.3-4) ... Removing libfontconfig1:amd64 (2.17.1-5) ... Removing fontconfig-config (2.17.1-5) ... Removing fonts-dejavu-core (2.37-9) ... Removing fonts-dejavu-mono (2.37-9) ... Removing libheif-plugin-libde265:amd64 (1.23.6-2) ... Removing libde265-0:amd64 (1.1.3-1+b1) ... Removing libexpat1:amd64 (2.9.0-1) ... Removing libfreetype6:amd64 (2.14.3+dfsg-3) ... Removing libpng16-16t64:amd64 (1.6.59-1) ... Removing libx11-6:amd64 (2:1.8.13-1) ... Removing libx11-data (2:1.8.13-1) ... Removing libxcb1:amd64 (1.17.0-2+b2) ... Removing libxau6:amd64 (1:1.0.11-1+b2) ... Removing libxdmcp6:amd64 (1:1.1.5-2+b1) ... Removing libbrotli1:amd64 (1.2.0-4+b1) ... Processing triggers for libc-bin (2.43-7) ... 3m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', 'remove', '--allow-remove-essential', 'adwaita-icon-theme', 'alsa-topology-conf', 'alsa-ucm-conf', 'at-spi2-common', 'at-spi2-core', 'bamtools', 'bcftools', 'bowtie2', 'bubblewrap', 'bwa', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'dmsetup', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-lyx', 'fonts-urw-base35', 'gir1.2-girepository-3.0:amd64', 'gir1.2-glib-2.0:amd64', 'glycin-loaders', 'glycin-thumbnailers', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'ibus-gtk3:amd64', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'java-wrappers', 'javascript-common', 'junit4', 'krb5-locales', 'libabsl20260526:amd64', 'libada-url0-3:amd64', 'libaom3:amd64', 'libapache-pom-java', 'libapparmor1:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libbamtools2.5.3:amd64', 'libblas3:amd64', 'libbpf1:amd64', 'libbrotli1:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcares2:amd64', 'libcloudproviders0:amd64', 'libcolord2:amd64', 'libcom-err2:amd64', 'libcommons-beanutils-java', 'libcommons-codec-java', 'libcommons-collections3-java', 'libcommons-collections4-java', 'libcommons-compress-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-parent-java', 'libcryptsetup12:amd64', 'libcups2t64:amd64', 'libcurl4-gnutls:amd64', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate0:amd64', 'libdevmapper1.02.1:amd64', 'libdisplay-info3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libedlib1:amd64', 'libelf1t64:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libezmorph-java', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgav1-2:amd64', 'libgbm1:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libgif7:amd64', 'libgirepository-2.0-0:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libglycin-2-0:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error-l10n', 'libgpg-error0:amd64', 'libgpm2:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libhamcrest-java', 'libharfbuzz-subset0:amd64', 'libharfbuzz0b:amd64', 'libhdr-histogram6:amd64', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhtsjdk-java', 'libhwy1t64:amd64', 'libibus-1.0-5:amd64', 'libice6:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libimagequant0:amd64', 'libjaxen-java', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjson-c5:amd64', 'libjson-java', 'libjsoncpp26:amd64', 'libjxl0.11:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-common', 'libldap2:amd64', 'liblerc4:amd64', 'libllhttp9.4:amd64', 'libllvm21:amd64', 'liblmdb0:amd64', 'liblog4j1.2-java', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnlopt1:amd64', 'libnode137:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libopenjp2-7:amd64', 'libp11-kit0:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.42:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libproc2-1:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libraqm0:amd64', 'librav1e0.8:amd64', 'libreadline8t64:amd64', 'librhino-java', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsharpyuv0:amd64', 'libsimdjson33:amd64', 'libsimdutf35:amd64', 'libskia146:amd64', 'libslf4j-java', 'libsm6:amd64', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libspoa7.0.0:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libssw0:amd64', 'libsvtav1enc4:amd64', 'libsystemd-shared:amd64', 'libtasn1-6:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libtss2-esys-3.0.2-0t64:amd64', 'libtss2-mu-4.0.1-0t64:amd64', 'libtss2-rc0t64:amd64', 'libtss2-sys1t64:amd64', 'libtss2-tcti-cmd0t64:amd64', 'libtss2-tcti-device0t64:amd64', 'libtss2-tcti-mssim0t64:amd64', 'libtss2-tcti-swtpm0t64:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libx265-216:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2-16:amd64', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxom-java', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxres1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyuv0:amd64', 'libz3-4:amd64', 'libzopfli1', 'linux-sysctl-defaults', 'luit', 'media-types', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'miniasm', 'minimap', 'ncbi-blast+-', 'ncbi-data', 'ncbi-vdb-data', 'netbase', 'node-acorn', 'node-balanced-match', 'node-brace-expansion', 'node-commander', 'node-corepack', 'node-debug', 'node-llhttp', 'node-lru-cache', 'node-mathjax-full', 'node-minimatch', 'node-mj-context-menu', 'node-ms', 'node-semver', 'node-speech-rule-engine', 'node-undici', 'node-xmldom', 'node-xtend', 'nodejs', 'nodejs-doc', 'openjdk-25-jre:amd64', 'openjdk-25-jre-headless:amd64', 'openssl', 'pci.ids', 'perl', 'perl-modules-5.42', 'pilon', 'procps', 'psmisc', 'publicsuffix', 'python-biopython-doc', 'python-matplotlib-data', 'python3', 'python3-argcomplete', 'python3-argh', 'python3-attr', 'python3-biopython', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-fonttools', 'python3-freetype', 'python3-gffutils', 'python3-gi', 'python3-html5lib', 'python3-iniconfig', 'python3-joblib', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-munkres', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-olefile', 'python3-packaging', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pluggy', 'python3-psutil', 'python3-pybedtools', 'python3-pyfaidx', 'python3-pygments', 'python3-pyparsing', 'python3-pysam', 'python3-pytest', 'python3-reportlab', 'python3-rlpycairo', 'python3-skia-pathops', 'python3-soupsieve', 'python3-sympy', 'python3-tk', 'python3-typing-extensions', 'python3-ufolib2', 'python3-uharfbuzz', 'python3-webencodings', 'python3-yaml', 'python3-zopfli', 'python3.14', 'python3.14-minimal', 'python3.14-tk', 'racon', 'rampler', 'readline-common', 'samtools', 'scala-library', 'sgml-base', 'shared-mime-info', 'spades', 'sse4.2-support', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 'systemd-tpm', 'systemd-userdbd', 'tpm-udev', 'unicode-data', 'unicycler-data', 'unzip', 'user-session-migration', 'w3c-sgml-lib', 'x11-common', 'x11-utils', 'xdg-user-dirs', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xml-core', 'unicycler'] 3m1.9s INFO: Running scripts post_remove 3m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_remove_exceptions'] 3m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_remove_exceptions'] 3m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg', '--purge', 'adwaita-icon-theme', 'alsa-topology-conf', 'alsa-ucm-conf', 'at-spi2-common', 'at-spi2-core', 'bamtools', 'bcftools', 'bowtie2', 'bubblewrap', 'bwa', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'dmsetup', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-lyx', 'fonts-urw-base35', 'gir1.2-girepository-3.0:amd64', 'gir1.2-glib-2.0:amd64', 'glycin-loaders', 'glycin-thumbnailers', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'ibus-gtk3:amd64', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'java-wrappers', 'javascript-common', 'junit4', 'krb5-locales', 'libabsl20260526:amd64', 'libada-url0-3:amd64', 'libaom3:amd64', 'libapache-pom-java', 'libapparmor1:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libbamtools2.5.3:amd64', 'libblas3:amd64', 'libbpf1:amd64', 'libbrotli1:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcares2:amd64', 'libcloudproviders0:amd64', 'libcolord2:amd64', 'libcom-err2:amd64', 'libcommons-beanutils-java', 'libcommons-codec-java', 'libcommons-collections3-java', 'libcommons-collections4-java', 'libcommons-compress-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-parent-java', 'libcryptsetup12:amd64', 'libcups2t64:amd64', 'libcurl4-gnutls:amd64', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate0:amd64', 'libdevmapper1.02.1:amd64', 'libdisplay-info3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libedlib1:amd64', 'libelf1t64:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libezmorph-java', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgav1-2:amd64', 'libgbm1:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libgif7:amd64', 'libgirepository-2.0-0:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libglycin-2-0:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error-l10n', 'libgpg-error0:amd64', 'libgpm2:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libhamcrest-java', 'libharfbuzz-subset0:amd64', 'libharfbuzz0b:amd64', 'libhdr-histogram6:amd64', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhtsjdk-java', 'libhwy1t64:amd64', 'libibus-1.0-5:amd64', 'libice6:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libimagequant0:amd64', 'libjaxen-java', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjson-c5:amd64', 'libjson-java', 'libjsoncpp26:amd64', 'libjxl0.11:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-common', 'libldap2:amd64', 'liblerc4:amd64', 'libllhttp9.4:amd64', 'libllvm21:amd64', 'liblmdb0:amd64', 'liblog4j1.2-java', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnlopt1:amd64', 'libnode137:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libopenjp2-7:amd64', 'libp11-kit0:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.42:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libproc2-1:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libraqm0:amd64', 'librav1e0.8:amd64', 'libreadline8t64:amd64', 'librhino-java', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsharpyuv0:amd64', 'libsimdjson33:amd64', 'libsimdutf35:amd64', 'libskia146:amd64', 'libslf4j-java', 'libsm6:amd64', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libspoa7.0.0:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libssw0:amd64', 'libsvtav1enc4:amd64', 'libsystemd-shared:amd64', 'libtasn1-6:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libtss2-esys-3.0.2-0t64:amd64', 'libtss2-mu-4.0.1-0t64:amd64', 'libtss2-rc0t64:amd64', 'libtss2-sys1t64:amd64', 'libtss2-tcti-cmd0t64:amd64', 'libtss2-tcti-device0t64:amd64', 'libtss2-tcti-mssim0t64:amd64', 'libtss2-tcti-swtpm0t64:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libx265-216:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2-16:amd64', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxom-java', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxres1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyuv0:amd64', 'libz3-4:amd64', 'libzopfli1', 'linux-sysctl-defaults', 'luit', 'media-types', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'miniasm', 'minimap', 'ncbi-blast+', 'ncbi-data', 'ncbi-vdb-data', 'netbase', 'node-acorn', 'node-balanced-match', 'node-brace-expansion', 'node-commander', 'node-corepack', 'node-debug', 'node-llhttp', 'node-lru-cache', 'node-mathjax-full', 'node-minimatch', 'node-mj-context-menu', 'node-ms', 'node-semver', 'node-speech-rule-engine', 'node-undici', 'node-xmldom', 'node-xtend', 'nodejs', 'nodejs-doc', 'openjdk-25-jre:amd64', 'openjdk-25-jre-headless:amd64', 'openssl', 'pci.ids', 'perl', 'perl-modules-5.42', 'pilon', 'procps', 'psmisc', 'publicsuffix', 'python-biopython-doc', 'python-matplotlib-data', 'python3', 'python3-argcomplete', 'python3-argh', 'python3-attr', 'python3-biopython', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-fonttools', 'python3-freetype', 'python3-gffutils', 'python3-gi', 'python3-html5lib', 'python3-iniconfig', 'python3-joblib', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-munkres', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-olefile', 'python3-packaging', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pluggy', 'python3-psutil', 'python3-pybedtools', 'python3-pyfaidx', 'python3-pygments', 'python3-pyparsing', 'python3-pysam', 'python3-pytest', 'python3-reportlab', 'python3-rlpycairo', 'python3-skia-pathops', 'python3-soupsieve', 'python3-sympy', 'python3-tk', 'python3-typing-extensions', 'python3-ufolib2', 'python3-uharfbuzz', 'python3-webencodings', 'python3-yaml', 'python3-zopfli', 'python3.14', 'python3.14-minimal', 'python3.14-tk', 'racon', 'rampler', 'readline-common', 'samtools', 'scala-library', 'sgml-base', 'shared-mime-info', 'spades', 'sse4.2-support', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 'systemd-tpm', 'systemd-userdbd', 'tpm-udev', 'unicode-data', 'unicycler-data', 'unzip', 'user-session-migration', 'w3c-sgml-lib', 'x11-common', 'x11-utils', 'xdg-user-dirs', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xml-core'] 3m3.0s DUMP: (Reading database ... 5130 files and directories currently installed.) Purging configuration files for adwaita-icon-theme (51.0-1) ... dpkg: warning: ignoring request to remove alsa-topology-conf which is not installed dpkg: warning: ignoring request to remove alsa-ucm-conf which is not installed dpkg: warning: ignoring request to remove at-spi2-common which is not installed Purging configuration files for at-spi2-core (2.62.1-1) ... dpkg: warning: ignoring request to remove bamtools which is not installed dpkg: warning: ignoring request to remove bcftools which is not installed dpkg: warning: ignoring request to remove bowtie2 which is not installed dpkg: warning: ignoring request to remove bubblewrap which is not installed dpkg: warning: ignoring request to remove bwa which is not installed Purging configuration files for ca-certificates (20260816) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for ca-certificates-java (20260311) ... Purging configuration files for dbus (1.16.2-8) ... rmdir: failed to remove '/var/run/dbus': No such file or directory rmdir: failed to remove '/var/lib/dbus': Directory not empty dpkg: warning: while removing dbus, directory '/var/lib/dbus' not empty so not removed dpkg: warning: ignoring request to remove dbus-bin which is not installed Purging configuration files for dbus-daemon (1.16.2-8) ... dpkg: warning: ignoring request to remove dbus-session-bus-common which is not installed dpkg: warning: ignoring request to remove dbus-system-bus-common which is not installed Purging configuration files for dbus-user-session (1.16.2-8) ... dpkg: warning: ignoring request to remove dconf-gsettings-backend which is not installed Purging configuration files for dconf-service (51.0-2) ... dpkg: warning: ignoring request to remove default-jre which is not installed dpkg: warning: ignoring request to remove default-jre-headless which is not installed dpkg: warning: ignoring request to remove dmsetup which is not installed Purging configuration files for fontconfig (2.17.1-5) ... Purging configuration files for fontconfig-config (2.17.1-5) ... Purging configuration files for fonts-dejavu-core (2.37-9) ... dpkg: warning: ignoring request to remove fonts-dejavu-extra which is not installed Purging configuration files for fonts-dejavu-mono (2.37-9) ... dpkg: warning: ignoring request to remove fonts-lyx which is not installed Purging configuration files for fonts-urw-base35 (20200910-9) ... dpkg: warning: ignoring request to remove gir1.2-girepository-3.0 which is not installed dpkg: warning: ignoring request to remove gir1.2-glib-2.0 which is not installed dpkg: warning: ignoring request to remove glycin-loaders which is not installed dpkg: warning: ignoring request to remove glycin-thumbnailers which is not installed Purging configuration files for gsettings-desktop-schemas (51.0-2) ... rmdir: failed to remove '/var/lib/gsettings-desktop-schemas': No such file or directory dpkg: warning: ignoring request to remove gtk-update-icon-cache which is not installed dpkg: warning: ignoring request to remove hicolor-icon-theme which is not installed dpkg: warning: ignoring request to remove ibus-gtk3 which is not installed dpkg: warning: ignoring request to remove isa-support which is not installed dpkg: warning: ignoring request to remove isympy-common which is not installed dpkg: warning: ignoring request to remove isympy3 which is not installed Purging configuration files for java-common (0.77) ... dpkg: warning: ignoring request to remove java-wrappers which is not installed Purging configuration files for javascript-common (12+nmu1) ... dpkg: warning: ignoring request to remove junit4 which is not installed dpkg: warning: ignoring request to remove krb5-locales which is not installed dpkg: warning: ignoring request to remove libabsl20260526 which is not installed dpkg: warning: ignoring request to remove libada-url0-3 which is not installed dpkg: warning: ignoring request to remove libaom3 which is not installed dpkg: warning: ignoring request to remove libapache-pom-java which is not installed dpkg: warning: ignoring request to remove libapparmor1 which is not installed dpkg: warning: ignoring request to remove libasound2-data which is not installed dpkg: warning: ignoring request to remove libasound2t64 which is not installed dpkg: warning: ignoring request to remove libatk-bridge2.0-0t64 which is not installed dpkg: warning: ignoring request to remove libatk-wrapper-java which is not installed dpkg: warning: ignoring request to remove libatk-wrapper-java-jni which is not installed dpkg: warning: ignoring request to remove libatk1.0-0t64 which is not installed dpkg: warning: ignoring request to remove libatomic1 which is not installed dpkg: warning: ignoring request to remove libatspi2.0-0t64 which is not installed dpkg: warning: ignoring request to remove libavahi-client3 which is not installed dpkg: warning: ignoring request to remove libavahi-common-data which is not installed dpkg: warning: ignoring request to remove libavahi-common3 which is not installed dpkg: warning: ignoring request to remove libavif16 which is not installed dpkg: warning: ignoring request to remove libbamtools2.5.3 which is not installed dpkg: warning: ignoring request to remove libblas3 which is not installed dpkg: warning: ignoring request to remove libbpf1 which is not installed dpkg: warning: ignoring request to remove libbrotli1 which is not installed dpkg: warning: ignoring request to remove libcairo-gobject2 which is not installed dpkg: warning: ignoring request to remove libcairo2 which is not installed dpkg: warning: ignoring request to remove libcap2 which is not installed dpkg: warning: ignoring request to remove libcares2 which is not installed dpkg: warning: ignoring request to remove libcloudproviders0 which is not installed dpkg: warning: ignoring request to remove libcolord2 which is not installed dpkg: warning: ignoring request to remove libcom-err2 which is not installed dpkg: warning: ignoring request to remove libcommons-beanutils-java which is not installed dpkg: warning: ignoring request to remove libcommons-codec-java which is not installed dpkg: warning: ignoring request to remove libcommons-collections3-java which is not installed dpkg: warning: ignoring request to remove libcommons-collections4-java which is not installed dpkg: warning: ignoring request to remove libcommons-compress-java which is not installed dpkg: warning: ignoring request to remove libcommons-io-java which is not installed dpkg: warning: ignoring request to remove libcommons-jexl2-java which is not installed dpkg: warning: ignoring request to remove libcommons-lang-java which is not installed dpkg: warning: ignoring request to remove libcommons-lang3-java which is not installed dpkg: warning: ignoring request to remove libcommons-logging-java which is not installed dpkg: warning: ignoring request to remove libcommons-parent-java which is not installed dpkg: warning: ignoring request to remove libcryptsetup12 which is not installed dpkg: warning: ignoring request to remove libcups2t64 which is not installed dpkg: warning: ignoring request to remove libcurl4-gnutls which is not installed dpkg: warning: ignoring request to remove libdatrie1 which is not installed dpkg: warning: ignoring request to remove libdav1d7 which is not installed dpkg: warning: ignoring request to remove libdbus-1-3 which is not installed dpkg: warning: ignoring request to remove libdconf1 which is not installed dpkg: warning: ignoring request to remove libde265-0 which is not installed dpkg: warning: ignoring request to remove libdeflate0 which is not installed dpkg: warning: ignoring request to remove libdevmapper1.02.1 which is not installed dpkg: warning: ignoring request to remove libdisplay-info3 which is not installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which is not installed dpkg: warning: ignoring request to remove libdrm-common which is not installed dpkg: warning: ignoring request to remove libdrm-intel1 which is not installed dpkg: warning: ignoring request to remove libdrm2 which is not installed dpkg: warning: ignoring request to remove libedit2 which is not installed dpkg: warning: ignoring request to remove libedlib1 which is not installed dpkg: warning: ignoring request to remove libelf1t64 which is not installed dpkg: warning: ignoring request to remove libepoxy0 which is not installed dpkg: warning: ignoring request to remove libexpat1 which is not installed dpkg: warning: ignoring request to remove libezmorph-java which is not installed dpkg: warning: ignoring request to remove libffi8 which is not installed dpkg: warning: ignoring request to remove libfontconfig1 which is not installed dpkg: warning: ignoring request to remove libfontenc1 which is not installed dpkg: warning: ignoring request to remove libfreetype6 which is not installed dpkg: warning: ignoring request to remove libfribidi0 which is not installed dpkg: warning: ignoring request to remove libgav1-2 which is not installed dpkg: warning: ignoring request to remove libgbm1 which is not installed dpkg: warning: ignoring request to remove libgcrypt20 which is not installed dpkg: warning: ignoring request to remove libgdbm-compat4t64 which is not installed dpkg: warning: ignoring request to remove libgdbm6t64 which is not installed Purging configuration files for libgdk-pixbuf-2.0-0:amd64 (2.44.8+dfsg-1) ... dpkg: warning: ignoring request to remove libgdk-pixbuf2.0-common which is not installed dpkg: warning: ignoring request to remove libgfortran5 which is not installed dpkg: warning: ignoring request to remove libgif7 which is not installed dpkg: warning: ignoring request to remove libgirepository-2.0-0 which is not installed dpkg: warning: ignoring request to remove libgl1 which is not installed Purging configuration files for libgl1-mesa-dri:amd64 (26.1.6-1) ... Purging configuration files for libglib2.0-0t64:amd64 (2.90.1-2) ... dpkg: warning: ignoring request to remove libglib2.0-data which is not installed dpkg: warning: ignoring request to remove libglvnd0 which is not installed dpkg: warning: ignoring request to remove libglx-mesa0 which is not installed dpkg: warning: ignoring request to remove libglx0 which is not installed dpkg: warning: ignoring request to remove libglycin-2-0 which is not installed dpkg: warning: ignoring request to remove libgnutls30t64 which is not installed dpkg: warning: ignoring request to remove libgomp1 which is not installed dpkg: warning: ignoring request to remove libgpg-error-l10n which is not installed dpkg: warning: ignoring request to remove libgpg-error0 which is not installed dpkg: warning: ignoring request to remove libgpm2 which is not installed dpkg: warning: ignoring request to remove libgraphite2-3 which is not installed Purging configuration files for libgssapi-krb5-2:amd64 (1.22.1-3) ... Purging configuration files for libgtk-3-0t64:amd64 (3.24.52-2) ... dpkg: warning: ignoring request to remove libgtk-3-bin which is not installed Purging configuration files for libgtk-3-common (3.24.52-2) ... dpkg: warning: ignoring request to remove libhamcrest-java which is not installed dpkg: warning: ignoring request to remove libharfbuzz-subset0 which is not installed dpkg: warning: ignoring request to remove libharfbuzz0b which is not installed dpkg: warning: ignoring request to remove libhdr-histogram6 which is not installed dpkg: warning: ignoring request to remove libheif-plugin-aomenc which is not installed dpkg: warning: ignoring request to remove libheif-plugin-dav1d which is not installed dpkg: warning: ignoring request to remove libheif-plugin-libde265 which is not installed dpkg: warning: ignoring request to remove libheif-plugin-x265 which is not installed dpkg: warning: ignoring request to remove libheif1 which is not installed dpkg: warning: ignoring request to remove libhts3t64 which is not installed dpkg: warning: ignoring request to remove libhtscodecs2 which is not installed dpkg: warning: ignoring request to remove libhtsjdk-java which is not installed dpkg: warning: ignoring request to remove libhwy1t64 which is not installed dpkg: warning: ignoring request to remove libibus-1.0-5 which is not installed dpkg: warning: ignoring request to remove libice6 which is not installed dpkg: warning: ignoring request to remove libicu78 which is not installed dpkg: warning: ignoring request to remove libidn2-0 which is not installed dpkg: warning: ignoring request to remove libimagequant0 which is not installed dpkg: warning: ignoring request to remove libjaxen-java which is not installed dpkg: warning: ignoring request to remove libjbig0 which is not installed dpkg: warning: ignoring request to remove libjpeg62-turbo which is not installed Purging configuration files for libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... dpkg: warning: ignoring request to remove libjs-sphinxdoc which is not installed dpkg: warning: ignoring request to remove libjson-c5 which is not installed dpkg: warning: ignoring request to remove libjson-java which is not installed dpkg: warning: ignoring request to remove libjsoncpp26 which is not installed dpkg: warning: ignoring request to remove libjxl0.11 which is not installed dpkg: warning: ignoring request to remove libk5crypto3 which is not installed dpkg: warning: ignoring request to remove libkeyutils1 which is not installed dpkg: warning: ignoring request to remove libkmod2 which is not installed dpkg: warning: ignoring request to remove libkrb5-3 which is not installed dpkg: warning: ignoring request to remove libkrb5support0 which is not installed dpkg: warning: ignoring request to remove liblapack3 which is not installed dpkg: warning: ignoring request to remove liblcms2-2 which is not installed Purging configuration files for libldap-common (2.6.14+dfsg-2) ... dpkg: warning: ignoring request to remove libldap2 which is not installed dpkg: warning: ignoring request to remove liblerc4 which is not installed dpkg: warning: ignoring request to remove libllhttp9.4 which is not installed dpkg: warning: ignoring request to remove libllvm21 which is not installed dpkg: warning: ignoring request to remove liblmdb0 which is not installed dpkg: warning: ignoring request to remove liblog4j1.2-java which is not installed dpkg: warning: ignoring request to remove libmbedcrypto16 which is not installed dpkg: warning: ignoring request to remove libmbedtls21 which is not installed dpkg: warning: ignoring request to remove libmbedx509-7 which is not installed dpkg: warning: ignoring request to remove libncbi-ngs3 which is not installed dpkg: warning: ignoring request to remove libncbi-vdb3 which is not installed dpkg: warning: ignoring request to remove libncurses6 which is not installed dpkg: warning: ignoring request to remove libncursesw6 which is not installed dpkg: warning: ignoring request to remove libnghttp2-14 which is not installed dpkg: warning: ignoring request to remove libnghttp3-9 which is not installed dpkg: warning: ignoring request to remove libngs-java which is not installed dpkg: warning: ignoring request to remove libngs-jni which is not installed dpkg: warning: ignoring request to remove libngtcp2-16 which is not installed dpkg: warning: ignoring request to remove libngtcp2-crypto-gnutls8 which is not installed dpkg: warning: ignoring request to remove libnlopt1 which is not installed dpkg: warning: ignoring request to remove libnode137 which is not installed dpkg: warning: ignoring request to remove libnspr4 which is not installed Purging configuration files for libnss-systemd:amd64 (262-1) ... dpkg: warning: ignoring request to remove libnss3 which is not installed dpkg: warning: ignoring request to remove libnuma1 which is not installed dpkg: warning: ignoring request to remove libopenjp2-7 which is not installed dpkg: warning: ignoring request to remove libp11-kit0 which is not installed dpkg: warning: ignoring request to remove libpam-systemd which is not installed dpkg: warning: ignoring request to remove libpango-1.0-0 which is not installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which is not installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which is not installed dpkg: warning: ignoring request to remove libpciaccess0 which is not installed dpkg: warning: ignoring request to remove libpcsclite1 which is not installed dpkg: warning: ignoring request to remove libperl5.42 which is not installed dpkg: warning: ignoring request to remove libpixman-1-0 which is not installed dpkg: warning: ignoring request to remove libpng16-16t64 which is not installed dpkg: warning: ignoring request to remove libproc2-1 which is not installed dpkg: warning: ignoring request to remove libpsl5t64 which is not installed dpkg: warning: ignoring request to remove libpython3-stdlib which is not installed Purging configuration files for libpython3.14-minimal:amd64 (3.14.8-1) ... dpkg: warning: ignoring request to remove libpython3.14-stdlib which is not installed dpkg: warning: ignoring request to remove libqhull-r8.0 which is not installed dpkg: warning: ignoring request to remove libraqm0 which is not installed dpkg: warning: ignoring request to remove librav1e0.8 which is not installed Purging configuration files for libreadline8t64:amd64 (8.3-4) ... dpkg: warning: ignoring request to remove librhino-java which is not installed dpkg: warning: ignoring request to remove librsvg2-2 which is not installed dpkg: warning: ignoring request to remove librsvg2-common which is not installed dpkg: warning: ignoring request to remove libsasl2-2 which is not installed Purging configuration files for libsasl2-modules:amd64 (2.1.28+dfsg1-12) ... dpkg: warning: ignoring request to remove libsasl2-modules-db which is not installed Purging configuration files for libsensors-config (1:3.6.2-2) ... dpkg: warning: ignoring request to remove libsensors5 which is not installed dpkg: warning: ignoring request to remove libsharpyuv0 which is not installed dpkg: warning: ignoring request to remove libsimdjson33 which is not installed dpkg: warning: ignoring request to remove libsimdutf35 which is not installed dpkg: warning: ignoring request to remove libskia146 which is not installed dpkg: warning: ignoring request to remove libslf4j-java which is not installed dpkg: warning: ignoring request to remove libsm6 which is not installed dpkg: warning: ignoring request to remove libsnappy-java which is not installed dpkg: warning: ignoring request to remove libsnappy-jni which is not installed dpkg: warning: ignoring request to remove libsnappy1v5 which is not installed dpkg: warning: ignoring request to remove libspoa7.0.0 which is not installed dpkg: warning: ignoring request to remove libsqlite3-0 which is not installed dpkg: warning: ignoring request to remove libssh2-1t64 which is not installed dpkg: warning: ignoring request to remove libssw0 which is not installed dpkg: warning: ignoring request to remove libsvtav1enc4 which is not installed dpkg: warning: ignoring request to remove libsystemd-shared which is not installed dpkg: warning: ignoring request to remove libtasn1-6 which is not installed dpkg: warning: ignoring request to remove libtcl8.6 which is not installed dpkg: warning: ignoring request to remove libthai-data which is not installed dpkg: warning: ignoring request to remove libthai0 which is not installed dpkg: warning: ignoring request to remove libtiff6 which is not installed dpkg: warning: ignoring request to remove libtk8.6 which is not installed dpkg: warning: ignoring request to remove libtss2-esys-3.0.2-0t64 which is not installed dpkg: warning: ignoring request to remove libtss2-mu-4.0.1-0t64 which is not installed dpkg: warning: ignoring request to remove libtss2-rc0t64 which is not installed dpkg: warning: ignoring request to remove libtss2-sys1t64 which is not installed dpkg: warning: ignoring request to remove libtss2-tcti-cmd0t64 which is not installed dpkg: warning: ignoring request to remove libtss2-tcti-device0t64 which is not installed dpkg: warning: ignoring request to remove libtss2-tcti-mssim0t64 which is not installed dpkg: warning: ignoring request to remove libtss2-tcti-swtpm0t64 which is not installed dpkg: warning: ignoring request to remove libunistring5 which is not installed dpkg: warning: ignoring request to remove libuv1t64 which is not installed dpkg: warning: ignoring request to remove libvulkan1 which is not installed dpkg: warning: ignoring request to remove libwayland-client0 which is not installed dpkg: warning: ignoring request to remove libwayland-cursor0 which is not installed dpkg: warning: ignoring request to remove libwayland-egl1 which is not installed dpkg: warning: ignoring request to remove libwebp7 which is not installed dpkg: warning: ignoring request to remove libwebpdemux2 which is not installed dpkg: warning: ignoring request to remove libwebpmux3 which is not installed dpkg: warning: ignoring request to remove libx11-6 which is not installed dpkg: warning: ignoring request to remove libx11-data which is not installed dpkg: warning: ignoring request to remove libx11-xcb1 which is not installed dpkg: warning: ignoring request to remove libx265-216 which is not installed dpkg: warning: ignoring request to remove libxau6 which is not installed dpkg: warning: ignoring request to remove libxaw7 which is not installed dpkg: warning: ignoring request to remove libxcb-dri3-0 which is not installed dpkg: warning: ignoring request to remove libxcb-glx0 which is not installed dpkg: warning: ignoring request to remove libxcb-present0 which is not installed dpkg: warning: ignoring request to remove libxcb-randr0 which is not installed dpkg: warning: ignoring request to remove libxcb-render0 which is not installed dpkg: warning: ignoring request to remove libxcb-shape0 which is not installed dpkg: warning: ignoring request to remove libxcb-shm0 which is not installed dpkg: warning: ignoring request to remove libxcb-sync1 which is not installed dpkg: warning: ignoring request to remove libxcb-xfixes0 which is not installed dpkg: warning: ignoring request to remove libxcb1 which is not installed dpkg: warning: ignoring request to remove libxcomposite1 which is not installed dpkg: warning: ignoring request to remove libxcursor1 which is not installed dpkg: warning: ignoring request to remove libxdamage1 which is not installed dpkg: warning: ignoring request to remove libxdmcp6 which is not installed dpkg: warning: ignoring request to remove libxerces2-java which is not installed dpkg: warning: ignoring request to remove libxext6 which is not installed dpkg: warning: ignoring request to remove libxfixes3 which is not installed dpkg: warning: ignoring request to remove libxft2 which is not installed dpkg: warning: ignoring request to remove libxi6 which is not installed dpkg: warning: ignoring request to remove libxinerama1 which is not installed dpkg: warning: ignoring request to remove libxkbcommon0 which is not installed dpkg: warning: ignoring request to remove libxkbfile1 which is not installed dpkg: warning: ignoring request to remove libxml-commons-external-java which is not installed Purging configuration files for libxml-commons-resolver1.1-java (1.2-11) ... dpkg: warning: while removing libxml-commons-resolver1.1-java, directory '/etc/xml' not empty so not removed dpkg: warning: ignoring request to remove libxml2-16 which is not installed dpkg: warning: ignoring request to remove libxmu6 which is not installed dpkg: warning: ignoring request to remove libxmuu1 which is not installed dpkg: warning: ignoring request to remove libxom-java which is not installed dpkg: warning: ignoring request to remove libxpm4 which is not installed dpkg: warning: ignoring request to remove libxrandr2 which is not installed dpkg: warning: ignoring request to remove libxrender1 which is not installed dpkg: warning: ignoring request to remove libxres1 which is not installed dpkg: warning: ignoring request to remove libxshmfence1 which is not installed dpkg: warning: ignoring request to remove libxslt1.1 which is not installed dpkg: warning: ignoring request to remove libxss1 which is not installed dpkg: warning: ignoring request to remove libxt6t64 which is not installed dpkg: warning: ignoring request to remove libxtst6 which is not installed dpkg: warning: ignoring request to remove libxv1 which is not installed dpkg: warning: ignoring request to remove libxxf86dga1 which is not installed dpkg: warning: ignoring request to remove libxxf86vm1 which is not installed dpkg: warning: ignoring request to remove libyaml-0-2 which is not installed dpkg: warning: ignoring request to remove libyuv0 which is not installed dpkg: warning: ignoring request to remove libz3-4 which is not installed dpkg: warning: ignoring request to remove libzopfli1 which is not installed dpkg: warning: ignoring request to remove linux-sysctl-defaults which is not installed Purging configuration files for luit (2.0.20250912-1) ... Purging configuration files for media-types (14.0.0) ... dpkg: warning: ignoring request to remove mesa-libgallium which is not installed dpkg: warning: ignoring request to remove mesa-vulkan-drivers which is not installed dpkg: warning: ignoring request to remove miniasm which is not installed dpkg: warning: ignoring request to remove minimap which is not installed dpkg: warning: ignoring request to remove ncbi-blast+ which is not installed Purging configuration files for ncbi-data (6.1.20170106+dfsg2-7) ... Purging configuration files for ncbi-vdb-data (3.4.1+dfsg-1) ... Purging configuration files for netbase (6.6) ... dpkg: warning: ignoring request to remove node-acorn which is not installed dpkg: warning: ignoring request to remove node-balanced-match which is not installed dpkg: warning: ignoring request to remove node-brace-expansion which is not installed dpkg: warning: ignoring request to remove node-commander which is not installed dpkg: warning: ignoring request to remove node-corepack which is not installed dpkg: warning: ignoring request to remove node-debug which is not installed dpkg: warning: ignoring request to remove node-llhttp which is not installed dpkg: warning: ignoring request to remove node-lru-cache which is not installed dpkg: warning: ignoring request to remove node-mathjax-full which is not installed dpkg: warning: ignoring request to remove node-minimatch which is not installed dpkg: warning: ignoring request to remove node-mj-context-menu which is not installed dpkg: warning: ignoring request to remove node-ms which is not installed dpkg: warning: ignoring request to remove node-semver which is not installed dpkg: warning: ignoring request to remove node-speech-rule-engine which is not installed Purging configuration files for node-undici (8.10.2+dfsg+~cs3.2.2-1) ... dpkg: warning: ignoring request to remove node-xmldom which is not installed dpkg: warning: ignoring request to remove node-xtend which is not installed dpkg: warning: ignoring request to remove nodejs which is not installed dpkg: warning: ignoring request to remove nodejs-doc which is not installed dpkg: warning: ignoring request to remove openjdk-25-jre which is not installed Purging configuration files for openjdk-25-jre-headless:amd64 (25.0.5~7ea-1) ... Purging configuration files for openssl (3.6.5-1) ... dpkg: warning: ignoring request to remove pci.ids which is not installed Purging configuration files for perl (5.42.3-1) ... dpkg: warning: ignoring request to remove perl-modules-5.42 which is not installed dpkg: warning: ignoring request to remove pilon which is not installed Purging configuration files for procps (2:4.0.7-1) ... dpkg: warning: ignoring request to remove psmisc which is not installed dpkg: warning: ignoring request to remove publicsuffix which is not installed dpkg: warning: ignoring request to remove python-biopython-doc which is not installed Purging configuration files for python-matplotlib-data (3.10.9+dfsg1-1) ... Purging configuration files for python3 (3.14.7-3) ... Purging configuration files for python3-argcomplete (3.7.0-1) ... dpkg: warning: ignoring request to remove python3-argh which is not installed dpkg: warning: ignoring request to remove python3-attr which is not installed dpkg: warning: ignoring request to remove python3-biopython which is not installed dpkg: warning: ignoring request to remove python3-brotli which is not installed dpkg: warning: ignoring request to remove python3-bs4 which is not installed dpkg: warning: ignoring request to remove python3-cairo which is not installed dpkg: warning: ignoring request to remove python3-charset-normalizer which is not installed dpkg: warning: ignoring request to remove python3-contourpy which is not installed dpkg: warning: ignoring request to remove python3-cssselect which is not installed dpkg: warning: ignoring request to remove python3-cycler which is not installed dpkg: warning: ignoring request to remove python3-dateutil which is not installed dpkg: warning: ignoring request to remove python3-fonttools which is not installed dpkg: warning: ignoring request to remove python3-freetype which is not installed dpkg: warning: ignoring request to remove python3-gffutils which is not installed dpkg: warning: ignoring request to remove python3-gi which is not installed dpkg: warning: ignoring request to remove python3-html5lib which is not installed dpkg: warning: ignoring request to remove python3-iniconfig which is not installed dpkg: warning: ignoring request to remove python3-joblib which is not installed dpkg: warning: ignoring request to remove python3-kiwisolver which is not installed dpkg: warning: ignoring request to remove python3-lxml which is not installed dpkg: warning: ignoring request to remove python3-lz4 which is not installed dpkg: warning: ignoring request to remove python3-matplotlib which is not installed dpkg: warning: ignoring request to remove python3-minimal which is not installed dpkg: warning: ignoring request to remove python3-mpmath which is not installed dpkg: warning: ignoring request to remove python3-munkres which is not installed Purging configuration files for python3-numpy (1:2.4.6+ds-4+b1) ... dpkg: warning: ignoring request to remove python3-numpy-dev which is not installed dpkg: warning: ignoring request to remove python3-olefile which is not installed dpkg: warning: ignoring request to remove python3-packaging which is not installed dpkg: warning: ignoring request to remove python3-pil which is not installed dpkg: warning: ignoring request to remove python3-pil.imagetk which is not installed dpkg: warning: ignoring request to remove python3-pluggy which is not installed dpkg: warning: ignoring request to remove python3-psutil which is not installed dpkg: warning: ignoring request to remove python3-pybedtools which is not installed dpkg: warning: ignoring request to remove python3-pyfaidx which is not installed dpkg: warning: ignoring request to remove python3-pygments which is not installed dpkg: warning: ignoring request to remove python3-pyparsing which is not installed dpkg: warning: ignoring request to remove python3-pysam which is not installed dpkg: warning: ignoring request to remove python3-pytest which is not installed dpkg: warning: ignoring request to remove python3-reportlab which is not installed dpkg: warning: ignoring request to remove python3-rlpycairo which is not installed dpkg: warning: ignoring request to remove python3-skia-pathops which is not installed dpkg: warning: ignoring request to remove python3-soupsieve which is not installed Purging configuration files for python3-sympy (1.14.0-6) ... dpkg: warning: ignoring request to remove python3-tk which is not installed dpkg: warning: ignoring request to remove python3-typing-extensions which is not installed dpkg: warning: ignoring request to remove python3-ufolib2 which is not installed dpkg: warning: ignoring request to remove python3-uharfbuzz which is not installed dpkg: warning: ignoring request to remove python3-webencodings which is not installed dpkg: warning: ignoring request to remove python3-yaml which is not installed dpkg: warning: ignoring request to remove python3-zopfli which is not installed dpkg: warning: ignoring request to remove python3.14 which is not installed Purging configuration files for python3.14-minimal (3.14.8-1) ... dpkg: warning: ignoring request to remove python3.14-tk which is not installed dpkg: warning: ignoring request to remove racon which is not installed dpkg: warning: ignoring request to remove rampler which is not installed Purging configuration files for readline-common (8.3-4) ... dpkg: warning: ignoring request to remove samtools which is not installed dpkg: warning: ignoring request to remove scala-library which is not installed Purging configuration files for sgml-base (1.31+nmu1) ... Purging configuration files for shared-mime-info (2.4-5+b3) ... dpkg: warning: ignoring request to remove spades which is not installed Purging configuration files for sse4.2-support (34) ... Purging configuration files for systemd (262-1) ... dpkg: warning: ignoring request to remove systemd-cryptsetup which is not installed dpkg: warning: ignoring request to remove systemd-sysv which is not installed Purging configuration files for systemd-timesyncd (262-1) ... dpkg: warning: ignoring request to remove systemd-tpm which is not installed Purging configuration files for systemd-userdbd (262-1) ... Purging configuration files for tpm-udev (4.2.0-2) ... dpkg: warning: ignoring request to remove unicode-data which is not installed dpkg: warning: ignoring request to remove unicycler-data which is not installed dpkg: warning: ignoring request to remove unzip which is not installed Purging configuration files for user-session-migration (0.5.2) ... Purging configuration files for w3c-sgml-lib (1.3-3) ... Purging configuration files for x11-common (1:7.7+26) ... Purging configuration files for x11-utils (7.7+7) ... Purging configuration files for xdg-user-dirs (0.20-1) ... dpkg: warning: ignoring request to remove xfonts-encodings which is not installed Purging configuration files for xfonts-utils (1:7.7+7) ... Purging configuration files for xkb-data (2.48-1) ... Purging configuration files for xml-core (0.21) ... 3m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg', '--purge', 'adwaita-icon-theme', 'alsa-topology-conf', 'alsa-ucm-conf', 'at-spi2-common', 'at-spi2-core', 'bamtools', 'bcftools', 'bowtie2', 'bubblewrap', 'bwa', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'dmsetup', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-lyx', 'fonts-urw-base35', 'gir1.2-girepository-3.0:amd64', 'gir1.2-glib-2.0:amd64', 'glycin-loaders', 'glycin-thumbnailers', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'ibus-gtk3:amd64', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'java-wrappers', 'javascript-common', 'junit4', 'krb5-locales', 'libabsl20260526:amd64', 'libada-url0-3:amd64', 'libaom3:amd64', 'libapache-pom-java', 'libapparmor1:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libbamtools2.5.3:amd64', 'libblas3:amd64', 'libbpf1:amd64', 'libbrotli1:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcares2:amd64', 'libcloudproviders0:amd64', 'libcolord2:amd64', 'libcom-err2:amd64', 'libcommons-beanutils-java', 'libcommons-codec-java', 'libcommons-collections3-java', 'libcommons-collections4-java', 'libcommons-compress-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-parent-java', 'libcryptsetup12:amd64', 'libcups2t64:amd64', 'libcurl4-gnutls:amd64', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate0:amd64', 'libdevmapper1.02.1:amd64', 'libdisplay-info3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libedlib1:amd64', 'libelf1t64:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libezmorph-java', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgav1-2:amd64', 'libgbm1:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran5:amd64', 'libgif7:amd64', 'libgirepository-2.0-0:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libglycin-2-0:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error-l10n', 'libgpg-error0:amd64', 'libgpm2:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libhamcrest-java', 'libharfbuzz-subset0:amd64', 'libharfbuzz0b:amd64', 'libhdr-histogram6:amd64', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhtsjdk-java', 'libhwy1t64:amd64', 'libibus-1.0-5:amd64', 'libice6:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libimagequant0:amd64', 'libjaxen-java', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjson-c5:amd64', 'libjson-java', 'libjsoncpp26:amd64', 'libjxl0.11:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'libldap-common', 'libldap2:amd64', 'liblerc4:amd64', 'libllhttp9.4:amd64', 'libllvm21:amd64', 'liblmdb0:amd64', 'liblog4j1.2-java', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnlopt1:amd64', 'libnode137:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libopenjp2-7:amd64', 'libp11-kit0:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.42:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libproc2-1:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libraqm0:amd64', 'librav1e0.8:amd64', 'libreadline8t64:amd64', 'librhino-java', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsharpyuv0:amd64', 'libsimdjson33:amd64', 'libsimdutf35:amd64', 'libskia146:amd64', 'libslf4j-java', 'libsm6:amd64', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libspoa7.0.0:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libssw0:amd64', 'libsvtav1enc4:amd64', 'libsystemd-shared:amd64', 'libtasn1-6:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libtss2-esys-3.0.2-0t64:amd64', 'libtss2-mu-4.0.1-0t64:amd64', 'libtss2-rc0t64:amd64', 'libtss2-sys1t64:amd64', 'libtss2-tcti-cmd0t64:amd64', 'libtss2-tcti-device0t64:amd64', 'libtss2-tcti-mssim0t64:amd64', 'libtss2-tcti-swtpm0t64:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libx265-216:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2-16:amd64', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxom-java', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxres1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyuv0:amd64', 'libz3-4:amd64', 'libzopfli1', 'linux-sysctl-defaults', 'luit', 'media-types', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'miniasm', 'minimap', 'ncbi-blast+', 'ncbi-data', 'ncbi-vdb-data', 'netbase', 'node-acorn', 'node-balanced-match', 'node-brace-expansion', 'node-commander', 'node-corepack', 'node-debug', 'node-llhttp', 'node-lru-cache', 'node-mathjax-full', 'node-minimatch', 'node-mj-context-menu', 'node-ms', 'node-semver', 'node-speech-rule-engine', 'node-undici', 'node-xmldom', 'node-xtend', 'nodejs', 'nodejs-doc', 'openjdk-25-jre:amd64', 'openjdk-25-jre-headless:amd64', 'openssl', 'pci.ids', 'perl', 'perl-modules-5.42', 'pilon', 'procps', 'psmisc', 'publicsuffix', 'python-biopython-doc', 'python-matplotlib-data', 'python3', 'python3-argcomplete', 'python3-argh', 'python3-attr', 'python3-biopython', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-fonttools', 'python3-freetype', 'python3-gffutils', 'python3-gi', 'python3-html5lib', 'python3-iniconfig', 'python3-joblib', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-munkres', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-olefile', 'python3-packaging', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pluggy', 'python3-psutil', 'python3-pybedtools', 'python3-pyfaidx', 'python3-pygments', 'python3-pyparsing', 'python3-pysam', 'python3-pytest', 'python3-reportlab', 'python3-rlpycairo', 'python3-skia-pathops', 'python3-soupsieve', 'python3-sympy', 'python3-tk', 'python3-typing-extensions', 'python3-ufolib2', 'python3-uharfbuzz', 'python3-webencodings', 'python3-yaml', 'python3-zopfli', 'python3.14', 'python3.14-minimal', 'python3.14-tk', 'racon', 'rampler', 'readline-common', 'samtools', 'scala-library', 'sgml-base', 'shared-mime-info', 'spades', 'sse4.2-support', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 'systemd-tpm', 'systemd-userdbd', 'tpm-udev', 'unicode-data', 'unicycler-data', 'unzip', 'user-session-migration', 'w3c-sgml-lib', 'x11-common', 'x11-utils', 'xdg-user-dirs', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xml-core'] 3m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg', '--purge', 'unicycler'] 3m3.0s DUMP: dpkg: warning: ignoring request to remove unicycler which is not installed 3m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg', '--purge', 'unicycler'] 3m3.0s INFO: Running scripts post_purge 3m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_purge_exceptions'] 3m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_purge_exceptions'] 3m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg', '--purge', '--pending'] 3m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg', '--purge', '--pending'] 3m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg', '--remove', '--pending'] 3m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg', '--remove', '--pending'] 3m3.0s INFO: Running scripts post_test 3m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_test_exceptions'] 3m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'tmp/scripts/post_test_exceptions'] 3m3.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 3m3.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 3m3.4s INFO: IGNORED broken symlink: /etc/vconsole.conf (flag L+ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m3.4s INFO: IGNORED broken symlink: /etc/default/locale (flag L+ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m3.6s INFO: IGNORED broken symlink: /run/varlink/registry/io.systemd.Journal (flag L systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-varlink.conf) 3m3.6s INFO: IGNORED broken symlink: /run/varlink/registry/io.systemd.Manager (flag L systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-varlink.conf) 3m3.6s INFO: IGNORED broken symlink: /run/varlink/registry/io.systemd.Unit (flag L systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-varlink.conf) 3m3.6s DEBUG: No broken symlinks as far as we can find. 3m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg-divert', '--list'] 3m3.6s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 3m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'dpkg-divert', '--list'] 3m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', 'clean'] 3m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to', 'apt-get', 'clean'] 3m3.7s DEBUG: Recording chroot state 3m4.3s INFO: IGNORED PATH@1: /home (flag Q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/home.conf) 3m4.3s INFO: IGNORED PATH@1: /var/ (flag q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.3s INFO: IGNORED PATH@1: /var/lib/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.3s INFO: IGNORED PATH@1: /var/lib/systemd/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.3s INFO: IGNORED PATH@1: /var/cache/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.3s INFO: IGNORED PATH@1: /var/log/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.3s INFO: IGNORED PATH@1: /var/spool/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.3s INFO: IGNORED PATH@1: /var/tmp/ (flag q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/tmp.conf) 3m4.3s INFO: IGNORED PATH@1: /etc/issue (flag C! systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.3s INFO: IGNORED PATH@1: /etc/nsswitch.conf (flag C! systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.3s INFO: IGNORED PATH@1: /etc/pam.d/ (flag C! systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.4s INFO: IGNORED PATH@1: /root/ (flag d- systemd-tmpfiles snippet /usr/lib/tmpfiles.d/provision.conf) 3m4.4s INFO: IGNORED PATH@1: /run/lock/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.4s INFO: IGNORED PATH@1: /tmp/ (flag q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/tmp.conf) 3m4.4s INFO: IGNORED PATH@1: /srv/ (flag q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/home.conf) 3m4.4s INFO: IGNORED PATH@2: /home (flag Q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/home.conf) 3m4.4s INFO: IGNORED PATH@2: /var/ (flag q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.4s INFO: IGNORED PATH@2: /var/lib/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.4s INFO: IGNORED PATH@2: /var/lib/tpm2-tss/system/keystore/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/tpm2-tss-fapi.conf) 3m4.4s INFO: IGNORED PATH@2: /var/lib/tpm/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/tpm-udev.conf) 3m4.4s INFO: IGNORED PATH@2: /var/lib/private/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /var/lib/systemd/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /var/cache/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.4s INFO: IGNORED PATH@2: /var/cache/private/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /var/log/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.4s INFO: IGNORED PATH@2: /var/log/private/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /var/spool/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/var.conf) 3m4.4s INFO: IGNORED PATH@2: /var/tmp/ (flag q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/tmp.conf) 3m4.4s INFO: IGNORED PATH@2: /etc/nsswitch.conf (flag C! systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.4s INFO: IGNORED PATH@2: /etc/vconsole.conf (flag L+ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.4s INFO: IGNORED PATH@2: /etc/issue (flag C! systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.4s INFO: IGNORED PATH@2: /etc/default/locale (flag L+ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.4s INFO: IGNORED PATH@2: /etc/pam.d/ (flag C! systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.4s INFO: IGNORED PATH@2: /root/ (flag d- systemd-tmpfiles snippet /usr/lib/tmpfiles.d/provision.conf) 3m4.4s INFO: IGNORED PATH@2: /root/.ssh/ (flag d- systemd-tmpfiles snippet /usr/lib/tmpfiles.d/provision.conf) 3m4.4s INFO: IGNORED PATH@2: /run/tpm2-tss/eventlog/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/tpm2-tss-fapi.conf) 3m4.4s INFO: IGNORED PATH@2: /run/log/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/user/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/report.sign/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/dissect-root/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/shutdown/ (flag d$ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/machines/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/users/ (flag d$ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/sessions/ (flag d$ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/seats/ (flag d$ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/ask-password/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/netif/ (flag d$ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd-network.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/netif/leases/ (flag d$ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd-network.conf) 3m4.4s INFO: IGNORED PATH@2: /run/systemd/netif/links/ (flag d$ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/systemd-network.conf) 3m4.4s INFO: IGNORED PATH@2: /run/sendsigs.omit.d/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.4s INFO: IGNORED PATH@2: /run/varlink/registry/io.systemd.Journal (flag L systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-varlink.conf) 3m4.4s INFO: IGNORED PATH@2: /run/varlink/registry/io.systemd.Manager (flag L systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-varlink.conf) 3m4.4s INFO: IGNORED PATH@2: /run/varlink/registry/io.systemd.Unit (flag L systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-varlink.conf) 3m4.4s INFO: IGNORED PATH@2: /run/sshd/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/20-systemd-ssh-generator.conf) 3m4.4s INFO: IGNORED PATH@2: /run/lock/ (flag d systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 3m4.4s INFO: IGNORED PATH@2: /tmp/ (flag q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/tmp.conf) 3m4.4s INFO: IGNORED PATH@2: /tmp/.font-unix/ (flag D systemd-tmpfiles snippet /usr/lib/tmpfiles.d/x11.conf) 3m4.4s INFO: IGNORED PATH@2: /tmp/.XIM-unix/ (flag D systemd-tmpfiles snippet /usr/lib/tmpfiles.d/x11.conf) 3m4.4s INFO: IGNORED PATH@2: /tmp/.ICE-unix/ (flag D systemd-tmpfiles snippet /usr/lib/tmpfiles.d/x11.conf) 3m4.4s INFO: IGNORED PATH@2: /tmp/.X11-unix/ (flag D systemd-tmpfiles snippet /usr/lib/tmpfiles.d/x11.conf) 3m4.4s INFO: IGNORED PATH@2: /srv/ (flag q systemd-tmpfiles snippet /usr/lib/tmpfiles.d/home.conf) 3m4.4s INFO: Warning: Package purging left files on system: /var/lib/tpm2-tss/ not owned /var/lib/tpm2-tss/system/ not owned 3m4.5s INFO: PASS: Installation and purging test. 3m4.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/shm'] 3m4.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/shm'] 3m4.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/console'] 3m4.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/console'] 3m4.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/ptmx'] 3m4.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/ptmx'] 3m4.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/pts'] 3m4.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/dev/pts'] 3m4.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/proc'] 3m5.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to/proc'] 3m5.0s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 3m5.0s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpyrj1k9to'] 3m5.0s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpyrj1k9to 3m5.0s INFO: PASS: All tests. 3m5.0s INFO: piuparts run ends. ret=0 End: 2026-10-20 03:39:51 GMT