Start: 2023-01-12 00:41:35 GMT [jessie] Package: clonalframe Version: 1.2-3 Installed-Size: 143 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.2.5), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), libqtcore4 (>= 4:4.5.3), libqtgui4 (>= 4:4.5.3), libstdc++6 (>= 4.4.0) Description: inference of bacterial microevolution using multilocus sequence data Homepage: http://www.xavierdidelot.xtreemhost.com/clonalframe.htm Description-md5: 50761e6f91c58a640bf4e38995728ecd Tag: implemented-in::c++, role::program Section: science Priority: optional Filename: pool/main/c/clonalframe/clonalframe_1.2-3_amd64.deb Size: 54960 MD5sum: d2fee6e3f43cf82eaddb029a9ea3e4e0 SHA1: 15467ceaaa7c6d92cc1dcf585db71801b49c1d6c SHA256: 0af8cf1558e19af5cc0114f97762b08c8e1e943dde0e7c0ca23db81bec7e2f81 [stretch] Package: clonalframe Version: 1.2-5 Installed-Size: 121 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libgsl2, libqtcore4 (>= 4:4.5.3), libqtgui4 (>= 4:4.5.3), libstdc++6 (>= 5.2) Description: inference of bacterial microevolution using multilocus sequence data Homepage: http://www.xavierdidelot.xtreemhost.com/clonalframe.htm Description-md5: 819b92534a0771df03d25aa1b0334115 Tag: implemented-in::c++, role::program Section: science Priority: optional Filename: pool/main/c/clonalframe/clonalframe_1.2-5_amd64.deb Size: 49222 MD5sum: 20cbb58ada3a9fec04c6e8a1df2c6420 SHA256: 7da16292d6b350cce26b98a9c31fb07a0aebd4aff9dfcd8d5cde16150a34172b Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --upgrade-before-dist-upgrade --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/jessie_amd64.tar.gz -d jessie -d stretch -B /srv/piuparts.debian.org/slave/refchroot/jessie2Xstretch-rcmd/reference-chroot-metadata.dat --apt clonalframe=1.2-5 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --upgrade-before-dist-upgrade --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/jessie_amd64.tar.gz -d jessie -d stretch -B /srv/piuparts.debian.org/slave/refchroot/jessie2Xstretch-rcmd/reference-chroot-metadata.dat --apt clonalframe=1.2-5 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-20-amd64 #1 SMP Debian 5.10.158-2 (2022-12-13) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp6ua_132z 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/jessie_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp6ua_132z 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/jessie_amd64.tar.gz'] 0m1.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/jessie_amd64.tar.gz'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/proc'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/proc'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/pts'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/pts'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/ptmx'] 0m1.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/ptmx'] 0m1.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/console'] 0m1.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/console'] 0m1.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/shm'] 0m1.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/shm'] 0m1.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ jessie main 0m1.5s DEBUG: Created policy-rc.d and chmodded it. 0m1.5s DEBUG: Created resolv.conf. 0m1.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp6ua_132z/tmp/scripts/ 0m1.5s INFO: Running scripts post_chroot_unpack 0m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-get', 'update'] 0m3.1s DUMP: Ign http://deb.debian.org jessie InRelease Hit http://deb.debian.org jessie Release.gpg Hit http://deb.debian.org jessie Release Ign http://deb.debian.org jessie Release Hit http://deb.debian.org jessie/main Translation-en Hit http://deb.debian.org jessie/main amd64 Packages Reading package lists... W: GPG error: http://deb.debian.org jessie Release: The following signatures were invalid: KEYEXPIRED 1668891673 0m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-get', 'update'] 0m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-get', '-yf', 'dist-upgrade'] 0m3.4s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-get', '-yf', 'dist-upgrade'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s DUMP: c58dd1ad19dd97acb5ff8b7cd65de431 - 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s INFO: Running scripts post_setup 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_dummy_users'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_dummy_users'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_forbid_home'] 0m4.6s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_forbid_home'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.6s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' '/bin/sync' -> 'true' 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_minimize'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_minimize'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_zz_backports'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/post_setup_zz_backports'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.7s DUMP: install ok installed acl acl 2.2.52-2 install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 1.0.9.8.4 install ok installed base-files base-files 8+deb8u11 install ok installed base-passwd base-passwd 3.5.37 install ok installed bash bash 4.3-11+deb8u1 install ok installed bsdutils bsdutils 1:2.25.2-6 install ok installed coreutils coreutils 8.23-4 install ok installed dash dash 0.5.7-4+b1 install ok installed debconf debconf 1.5.56+deb8u1 install ok installed debconf-i18n debconf-i18n 1.5.56+deb8u1 install ok installed debian-archive-keyring debian-archive-keyring 2017.5~deb8u1 install ok installed debianutils debianutils 4.4+b1 install ok installed diffutils diffutils 1:3.3-1+b1 install ok installed dmsetup dmsetup 2:1.02.90-2.2+deb8u1 install ok installed dpkg dpkg 1.17.27 install ok installed e2fslibs:amd64 e2fslibs 1.42.12-2+b1 install ok installed e2fsprogs e2fsprogs 1.42.12-2+b1 install ok installed findutils findutils 4.4.2-9+b1 install ok installed gcc-4.9-base:amd64 gcc-4.9-base 4.9.2-10+deb8u1 install ok installed gnupg gnupg 1.4.18-7+deb8u5 install ok installed gpgv gpgv 1.4.18-7+deb8u5 install ok installed grep grep 2.20-4.1 install ok installed gzip gzip 1.6-4 install ok installed hostname hostname 3.15 install ok installed init init 1.22 install ok installed initscripts initscripts 2.88dsf-59 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.52-2 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 1.0.9.8.4 install ok installed libattr1:amd64 libattr1 1:2.4.47-2 install ok installed libaudit-common libaudit-common 1:2.4-1 install ok installed libaudit1:amd64 libaudit1 1:2.4-1+b1 install ok installed libblkid1:amd64 libblkid1 2.25.2-6 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-7+b3 install ok installed libc-bin libc-bin 2.19-18+deb8u10 install ok installed libc6:amd64 libc6 2.19-18+deb8u10 install ok installed libcap2:amd64 libcap2 1:2.24-8 install ok installed libcap2-bin libcap2-bin 1:2.24-8 install ok installed libcomerr2:amd64 libcomerr2 1.42.12-2+b1 install ok installed libcryptsetup4:amd64 libcryptsetup4 2:1.6.6-5 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-9+deb8u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.192 install ok installed libdevmapper1.02.1:amd64 libdevmapper1.02.1 2:1.02.90-2.2+deb8u1 install ok installed libgcc1:amd64 libgcc1 1:4.9.2-10+deb8u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.6.3-2+deb8u4 install ok installed libgpg-error0:amd64 libgpg-error0 1.17-3 install ok installed libkmod2:amd64 libkmod2 18-3 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-8+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2+b3 install ok installed libmount1:amd64 libmount1 2.25.2-6 install ok installed libncurses5:amd64 libncurses5 5.9+20140913-1+deb8u3 install ok installed libncursesw5:amd64 libncursesw5 5.9+20140913-1+deb8u3 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.1+deb8u2+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.1+deb8u2+b1 install ok installed libpam-runtime libpam-runtime 1.1.8-3.1+deb8u2 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.1+deb8u2+b1 install ok installed libpcre3:amd64 libpcre3 2:8.35-3.3+deb8u4 install ok installed libprocps3:amd64 libprocps3 2:3.3.9-9+deb8u1 install ok installed libreadline6:amd64 libreadline6 6.3-8+b3 install ok installed libselinux1:amd64 libselinux1 2.3-2 install ok installed libsemanage-common libsemanage-common 2.3-1 install ok installed libsemanage1:amd64 libsemanage1 2.3-1+b1 install ok installed libsepol1:amd64 libsepol1 2.3-2 install ok installed libslang2:amd64 libslang2 2.3.0-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.25.2-6 install ok installed libss2:amd64 libss2 1.42.12-2+b1 install ok installed libstdc++6:amd64 libstdc++6 4.9.2-10+deb8u1 install ok installed libsystemd0:amd64 libsystemd0 215-17+deb8u7 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b3 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5+b2 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9+20140913-1+deb8u3 install ok installed libudev1:amd64 libudev1 215-17+deb8u7 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-25 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3+b2 install ok installed libuuid1:amd64 libuuid1 2.25.2-6 install ok installed login login 1:4.2-3+deb8u4 install ok installed lsb-base lsb-base 4.1+Debian13+nmu1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.25.2-6 install ok installed multiarch-support multiarch-support 2.19-18+deb8u10 install ok installed ncurses-base ncurses-base 5.9+20140913-1+deb8u3 install ok installed ncurses-bin ncurses-bin 5.9+20140913-1+deb8u3 install ok installed passwd passwd 1:4.2-3+deb8u4 install ok installed perl-base perl-base 5.20.2-3+deb8u11 install ok installed procps procps 2:3.3.9-9+deb8u1 install ok installed readline-common readline-common 6.3-8 install ok installed sed sed 4.2.2-4+deb8u1 install ok installed sensible-utils sensible-utils 0.0.9+deb8u1 install ok installed startpar startpar 0.59-3 install ok installed systemd systemd 215-17+deb8u7 install ok installed systemd-sysv systemd-sysv 215-17+deb8u7 install ok installed sysv-rc sysv-rc 2.88dsf-59 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59 install ok installed tar tar 1.27.1-2+deb8u1 install ok installed tzdata tzdata 2018e-0+deb8u1 install ok installed udev udev 215-17+deb8u7 install ok installed util-linux util-linux 2.25.2-6 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-2+b1 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.7s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/jessie2Xstretch-rcmd/reference-chroot-metadata.dat 0m4.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6ua_132z'] 0m5.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6ua_132z'] 0m5.1s INFO: Running scripts is_testable 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/is_testable_uninstallable'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/is_testable_uninstallable'] 0m5.1s INFO: Running scripts pre_test 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_test_exceptions'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_test_exceptions'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_test_root_password'] 0m5.1s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_test_root_password'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-cache', 'show', '--no-all-versions', 'clonalframe'] 0m5.1s DUMP: Package: clonalframe Version: 1.2-3 Installed-Size: 143 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.2.5), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), libqtcore4 (>= 4:4.5.3), libqtgui4 (>= 4:4.5.3), libstdc++6 (>= 4.4.0) Description-en: inference of bacterial microevolution using multilocus sequence data ClonalFrame identifies the clonal relationships between the members of a sample, while also estimating the chromosomal position of homologous recombination events that have disrupted the clonal inheritance. . ClonalFrame can be applied to any kind of sequence data, from a single fragment of DNA to whole genomes. It is well suited for the analysis of MLST data, where 7 gene fragments have been sequenced, but becomes progressively more powerful as the sequenced regions increase in length and number up to whole genomes. However, it requires the sequences to be aligned. If you have genomic data that is not aligned, we recommend using Mauve which produces alignment of whole bacterial genomes in exactly the format required for analysis with ClonalFrame. Description-md5: 50761e6f91c58a640bf4e38995728ecd Homepage: http://www.xavierdidelot.xtreemhost.com/clonalframe.htm Tag: implemented-in::c++, role::program Section: science Priority: optional Filename: pool/main/c/clonalframe/clonalframe_1.2-3_amd64.deb Size: 54960 MD5sum: d2fee6e3f43cf82eaddb029a9ea3e4e0 SHA1: 15467ceaaa7c6d92cc1dcf585db71801b49c1d6c SHA256: 0af8cf1558e19af5cc0114f97762b08c8e1e943dde0e7c0ca23db81bec7e2f81 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-cache', 'show', '--no-all-versions', 'clonalframe'] 0m5.1s INFO: apt-cache knows about the following packages: clonalframe 0m5.1s INFO: Running scripts pre_install 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_database-server'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_database-server'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_exceptions'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_exceptions'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_extras'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_extras'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-cache', 'policy'] 0m5.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian/ jessie/main Translation-en 500 http://deb.debian.org/debian/ jessie/main amd64 Packages release v=8.11,o=Debian,a=oldoldstable,n=jessie,l=Debian,c=main origin deb.debian.org Pinned packages: 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-cache', 'policy'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-cache', 'policy', 'clonalframe'] 0m5.2s DUMP: clonalframe: Installed: (none) Candidate: 1.2-3 Version table: 1.2-3 0 500 http://deb.debian.org/debian/ jessie/main amd64 Packages 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-cache', 'policy', 'clonalframe'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-get', '-y', 'install', 'clonalframe'] 0m5.4s DUMP: Reading package lists... Building dependency tree... The following extra packages will be installed: dbus fontconfig fontconfig-config fonts-dejavu-core ifupdown iproute2 isc-dhcp-client isc-dhcp-common krb5-locales libalgorithm-c3-perl libarchive-extract-perl libatm1 libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libcap-ng0 libcgi-fast-perl libcgi-pm-perl libclass-c3-perl libclass-c3-xs-perl libcpan-meta-perl libcups2 libdata-optlist-perl libdata-section-perl libdbus-1-3 libdns-export100 libexpat1 libfcgi-perl libffi6 libfontconfig1 libfreetype6 libgdbm3 libglib2.0-0 libglib2.0-data libgmp10 libgnutls-deb0-28 libgsl0ldbl libgssapi-krb5-2 libhogweed2 libice6 libirs-export91 libisc-export95 libisccfg-export90 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 liblog-message-perl liblog-message-simple-perl libmng1 libmodule-build-perl libmodule-pluggable-perl libmodule-signature-perl libmro-compat-perl libnettle4 libp11-kit0 libpackage-constants-perl libparams-util-perl libpng12-0 libpod-latex-perl libpod-readme-perl libqtcore4 libqtgui4 libregexp-common-perl libsm6 libsoftware-license-perl libsub-exporter-perl libsub-install-perl libtasn1-6 libterm-ui-perl libtext-soundex-perl libtext-template-perl libtiff5 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxrender1 libxt6 libxtables10 netbase perl perl-modules qtcore4-l10n rename sgml-base shared-mime-info ucf x11-common xdg-user-dirs xml-core Suggested packages: dbus-x11 ppp rdnssd net-tools iproute2-doc resolvconf avahi-autoipd nas cups-common gnutls-bin gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html krb5-doc krb5-user liblcms2-utils libicu52 libthai0 qt4-qtconfig perl-doc libterm-readline-gnu-perl libterm-readline-perl-perl make libb-lint-perl libcpanplus-dist-build-perl libcpanplus-perl libfile-checktree-perl libobject-accessor-perl sgml-base-doc debhelper Recommended packages: libarchive-tar-perl The following NEW packages will be installed: clonalframe dbus fontconfig fontconfig-config fonts-dejavu-core ifupdown iproute2 isc-dhcp-client isc-dhcp-common krb5-locales libalgorithm-c3-perl libarchive-extract-perl libatm1 libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libcap-ng0 libcgi-fast-perl libcgi-pm-perl libclass-c3-perl libclass-c3-xs-perl libcpan-meta-perl libcups2 libdata-optlist-perl libdata-section-perl libdbus-1-3 libdns-export100 libexpat1 libfcgi-perl libffi6 libfontconfig1 libfreetype6 libgdbm3 libglib2.0-0 libglib2.0-data libgmp10 libgnutls-deb0-28 libgsl0ldbl libgssapi-krb5-2 libhogweed2 libice6 libirs-export91 libisc-export95 libisccfg-export90 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 liblog-message-perl liblog-message-simple-perl libmng1 libmodule-build-perl libmodule-pluggable-perl libmodule-signature-perl libmro-compat-perl libnettle4 libp11-kit0 libpackage-constants-perl libparams-util-perl libpng12-0 libpod-latex-perl libpod-readme-perl libqtcore4 libqtgui4 libregexp-common-perl libsm6 libsoftware-license-perl libsub-exporter-perl libsub-install-perl libtasn1-6 libterm-ui-perl libtext-soundex-perl libtext-template-perl libtiff5 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxrender1 libxt6 libxtables10 netbase perl perl-modules qtcore4-l10n rename sgml-base shared-mime-info ucf x11-common xdg-user-dirs xml-core 0 upgraded, 99 newly installed, 0 to remove and 0 not upgraded. Need to get 32.7 MB of archives. After this operation, 113 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libgdbm3 libgmp10 libnettle4 libhogweed2 libffi6 libp11-kit0 libtasn1-6 libgnutls-deb0-28 libkeyutils1 libkrb5support0 libk5crypto3 libkrb5-3 libgssapi-krb5-2 libxml2 perl-modules perl libexpat1 libpng12-0 libfreetype6 ucf fonts-dejavu-core fontconfig-config libfontconfig1 fontconfig libatm1 libxau6 x11-common libice6 libsm6 libxdmcp6 libxcb1 libx11-data libx11-6 libxt6 libaudio2 libavahi-common-data libavahi-common3 libdbus-1-3 libavahi-client3 libcap-ng0 libcups2 libisc-export95 libdns-export100 libglib2.0-0 libisccfg-export90 libirs-export91 liblcms2-2 libjpeg62-turbo libmng1 qtcore4-l10n libqtcore4 libjbig0 libtiff5 libxext6 libxrender1 libqtgui4 sgml-base iproute2 ifupdown isc-dhcp-common isc-dhcp-client libxtables10 netbase dbus krb5-locales libgsl0ldbl clonalframe libalgorithm-c3-perl libarchive-extract-perl libcgi-pm-perl libfcgi-perl libcgi-fast-perl libclass-c3-perl libclass-c3-xs-perl libcpan-meta-perl libparams-util-perl libsub-install-perl libdata-optlist-perl libmro-compat-perl libsub-exporter-perl libdata-section-perl libglib2.0-data liblog-message-perl liblog-message-simple-perl libmodule-build-perl libmodule-pluggable-perl libmodule-signature-perl libpackage-constants-perl libpod-latex-perl libregexp-common-perl libpod-readme-perl libtext-template-perl libsoftware-license-perl libterm-ui-perl libtext-soundex-perl rename shared-mime-info xdg-user-dirs xml-core E: There are problems and -y was used without --force-yes 0m5.4s ERROR: Command failed (status=100): ['chroot', '/srv/piuparts.debian.org/tmp/tmp6ua_132z', 'apt-get', '-y', 'install', 'clonalframe'] Reading package lists... Building dependency tree... The following extra packages will be installed: dbus fontconfig fontconfig-config fonts-dejavu-core ifupdown iproute2 isc-dhcp-client isc-dhcp-common krb5-locales libalgorithm-c3-perl libarchive-extract-perl libatm1 libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libcap-ng0 libcgi-fast-perl libcgi-pm-perl libclass-c3-perl libclass-c3-xs-perl libcpan-meta-perl libcups2 libdata-optlist-perl libdata-section-perl libdbus-1-3 libdns-export100 libexpat1 libfcgi-perl libffi6 libfontconfig1 libfreetype6 libgdbm3 libglib2.0-0 libglib2.0-data libgmp10 libgnutls-deb0-28 libgsl0ldbl libgssapi-krb5-2 libhogweed2 libice6 libirs-export91 libisc-export95 libisccfg-export90 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 liblog-message-perl liblog-message-simple-perl libmng1 libmodule-build-perl libmodule-pluggable-perl libmodule-signature-perl libmro-compat-perl libnettle4 libp11-kit0 libpackage-constants-perl libparams-util-perl libpng12-0 libpod-latex-perl libpod-readme-perl libqtcore4 libqtgui4 libregexp-common-perl libsm6 libsoftware-license-perl libsub-exporter-perl libsub-install-perl libtasn1-6 libterm-ui-perl libtext-soundex-perl libtext-template-perl libtiff5 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxrender1 libxt6 libxtables10 netbase perl perl-modules qtcore4-l10n rename sgml-base shared-mime-info ucf x11-common xdg-user-dirs xml-core Suggested packages: dbus-x11 ppp rdnssd net-tools iproute2-doc resolvconf avahi-autoipd nas cups-common gnutls-bin gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html krb5-doc krb5-user liblcms2-utils libicu52 libthai0 qt4-qtconfig perl-doc libterm-readline-gnu-perl libterm-readline-perl-perl make libb-lint-perl libcpanplus-dist-build-perl libcpanplus-perl libfile-checktree-perl libobject-accessor-perl sgml-base-doc debhelper Recommended packages: libarchive-tar-perl The following NEW packages will be installed: clonalframe dbus fontconfig fontconfig-config fonts-dejavu-core ifupdown iproute2 isc-dhcp-client isc-dhcp-common krb5-locales libalgorithm-c3-perl libarchive-extract-perl libatm1 libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libcap-ng0 libcgi-fast-perl libcgi-pm-perl libclass-c3-perl libclass-c3-xs-perl libcpan-meta-perl libcups2 libdata-optlist-perl libdata-section-perl libdbus-1-3 libdns-export100 libexpat1 libfcgi-perl libffi6 libfontconfig1 libfreetype6 libgdbm3 libglib2.0-0 libglib2.0-data libgmp10 libgnutls-deb0-28 libgsl0ldbl libgssapi-krb5-2 libhogweed2 libice6 libirs-export91 libisc-export95 libisccfg-export90 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 liblog-message-perl liblog-message-simple-perl libmng1 libmodule-build-perl libmodule-pluggable-perl libmodule-signature-perl libmro-compat-perl libnettle4 libp11-kit0 libpackage-constants-perl libparams-util-perl libpng12-0 libpod-latex-perl libpod-readme-perl libqtcore4 libqtgui4 libregexp-common-perl libsm6 libsoftware-license-perl libsub-exporter-perl libsub-install-perl libtasn1-6 libterm-ui-perl libtext-soundex-perl libtext-template-perl libtiff5 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxrender1 libxt6 libxtables10 netbase perl perl-modules qtcore4-l10n rename sgml-base shared-mime-info ucf x11-common xdg-user-dirs xml-core 0 upgraded, 99 newly installed, 0 to remove and 0 not upgraded. Need to get 32.7 MB of archives. After this operation, 113 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libgdbm3 libgmp10 libnettle4 libhogweed2 libffi6 libp11-kit0 libtasn1-6 libgnutls-deb0-28 libkeyutils1 libkrb5support0 libk5crypto3 libkrb5-3 libgssapi-krb5-2 libxml2 perl-modules perl libexpat1 libpng12-0 libfreetype6 ucf fonts-dejavu-core fontconfig-config libfontconfig1 fontconfig libatm1 libxau6 x11-common libice6 libsm6 libxdmcp6 libxcb1 libx11-data libx11-6 libxt6 libaudio2 libavahi-common-data libavahi-common3 libdbus-1-3 libavahi-client3 libcap-ng0 libcups2 libisc-export95 libdns-export100 libglib2.0-0 libisccfg-export90 libirs-export91 liblcms2-2 libjpeg62-turbo libmng1 qtcore4-l10n libqtcore4 libjbig0 libtiff5 libxext6 libxrender1 libqtgui4 sgml-base iproute2 ifupdown isc-dhcp-common isc-dhcp-client libxtables10 netbase dbus krb5-locales libgsl0ldbl clonalframe libalgorithm-c3-perl libarchive-extract-perl libcgi-pm-perl libfcgi-perl libcgi-fast-perl libclass-c3-perl libclass-c3-xs-perl libcpan-meta-perl libparams-util-perl libsub-install-perl libdata-optlist-perl libmro-compat-perl libsub-exporter-perl libdata-section-perl libglib2.0-data liblog-message-perl liblog-message-simple-perl libmodule-build-perl libmodule-pluggable-perl libmodule-signature-perl libpackage-constants-perl libpod-latex-perl libregexp-common-perl libpod-readme-perl libtext-template-perl libsoftware-license-perl libterm-ui-perl libtext-soundex-perl rename shared-mime-info xdg-user-dirs xml-core E: There are problems and -y was used without --force-yes 0m5.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/shm'] 0m5.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/shm'] 0m5.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/console'] 0m5.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/console'] 0m5.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/ptmx'] 0m5.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/ptmx'] 0m5.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/pts'] 0m5.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/dev/pts'] 0m5.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/proc'] 0m5.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6ua_132z/proc'] 0m5.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6ua_132z'] 0m5.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6ua_132z'] 0m5.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp6ua_132z 0m5.9s ERROR: piuparts run ends. ret=1 End: 2023-01-12 00:41:41 GMT