Start: 2013-03-26 00:22:03 UTC [lenny] Package: python-biopython-martel Priority: optional Section: python Installed-Size: 281 Maintainer: Debian-Med Packaging Team Architecture: all Source: python-biopython Version: 1.45-3 Replaces: python2.3-biopython-martel (<< 1.42-1), python2.4-biopython-martel (<< 1.42-1) Provides: python2.4-biopython-martel, python2.5-biopython-martel Depends: python (>= 2.3), python-support (>= 0.7.1), python-biopython Conflicts: python2.3-biopython-martel (<< 1.42-1), python2.4-biopython-martel (<< 1.42-1) Filename: pool/main/p/python-biopython/python-biopython-martel_1.45-3_all.deb Size: 59214 MD5sum: 877cb70b0387c44b49585e4ec044c439 SHA1: b97d62480bbebc941062c89c3994da7186669347 SHA256: fe01499f2a8c31f79128a1c6a2ba022d2b6af337af901a5498715225412b35d7 Description: Flat file parser for the Biopython library Martel uses regular expression format definition to generate a parser for flat- and semi-structured files. The parse tree information is passed back to the caller using XML SAX events. In other words, Martel lets you parse flat files as if they are in XML. Homepage: http://biopython.org Python-Version: 2.4, 2.5 Tag: devel::lang:python, devel::library, field::biology, field::biology:bioinformatics, implemented-in::python, role::devel-lib, role::shared-lib, works-with::text [squeeze] Executing: sudo env PYTHONPATH=/org/piuparts.debian.org/lib/python2.6/dist-packages:/org/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 35m /org/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --warn-on-leftovers-after-purge --dpkg-noforce-unsafe-io --no-eatmydata -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror http://piatti.debian.org/debian/ --tmpdir /org/piuparts.debian.org/tmp -b /org/piuparts.debian.org/slave/basetgz/lenny.tar.gz -d lenny -d squeeze --apt python-biopython-martel=None Guessed: debian 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at http://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.51~201303251306~0.50-22-g27c4826 starting up. 0m0.0s INFO: Command line arguments: '/org/piuparts.debian.org/sbin/piuparts' '--skip-logrotatefiles-test' '--warn-on-others' '--scriptsdir' '/etc/piuparts/scripts' '--warn-on-leftovers-after-purge' '--dpkg-noforce-unsafe-io' '--no-eatmydata' '-i' '/etc/shells' '--scriptsdir' '/etc/piuparts/scripts-squeeze' '--warn-on-debsums-errors' '--mirror' 'http://piatti.debian.org/debian/' '--tmpdir' '/org/piuparts.debian.org/tmp' '-b' '/org/piuparts.debian.org/slave/basetgz/lenny.tar.gz' '-d' 'lenny' '-d' 'squeeze' '--apt' 'python-biopython-martel=None' 0m0.0s INFO: Running on: Linux piatti 2.6.32-5-amd64 #1 SMP Mon Feb 25 00:26:11 UTC 2013 x86_64 0m0.0s DEBUG: Created temporary directory /org/piuparts.debian.org/tmp/tmpTzQXL2 0m0.0s DEBUG: Unpacking /org/piuparts.debian.org/slave/basetgz/lenny.tar.gz into /org/piuparts.debian.org/tmp/tmpTzQXL2 0m0.0s DEBUG: Starting command: ['tar', '-C', '/org/piuparts.debian.org/tmp/tmpTzQXL2', '-zxf', '/org/piuparts.debian.org/slave/basetgz/lenny.tar.gz'] 0m5.3s DEBUG: Command ok: ['tar', '-C', '/org/piuparts.debian.org/tmp/tmpTzQXL2', '-zxf', '/org/piuparts.debian.org/slave/basetgz/lenny.tar.gz'] 0m5.3s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'mount', '-t', 'proc', 'proc', '/proc'] 0m5.3s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'mount', '-t', 'proc', 'proc', '/proc'] 0m5.3s DEBUG: sources.list: deb http://archive.debian.org/debian lenny main deb http://archive.debian.org/debian lenny contrib deb http://archive.debian.org/debian lenny non-free 0m5.3s DEBUG: Created policy-rc.d and chmodded it. 0m5.3s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', 'update'] 0m5.9s DUMP: Hit http://archive.debian.org lenny Release.gpg Hit http://archive.debian.org lenny Release Ign http://archive.debian.org lenny/main Packages/DiffIndex Ign http://archive.debian.org lenny/contrib Packages/DiffIndex Ign http://archive.debian.org lenny/non-free Packages/DiffIndex Hit http://archive.debian.org lenny/main Packages Hit http://archive.debian.org lenny/contrib Packages Hit http://archive.debian.org lenny/non-free Packages Reading package lists... 0m5.9s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', 'update'] 0m5.9s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', '-yf', 'dist-upgrade'] 0m6.4s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m6.4s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', '-yf', 'dist-upgrade'] 0m6.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /org/piuparts.debian.org/tmp/tmpTzQXL2/tmp/scripts/ 0m6.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts-squeeze to /org/piuparts.debian.org/tmp/tmpTzQXL2/tmp/scripts/ 0m6.4s INFO: Running scripts post_setup 0m6.4s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_setup_experimental'] 0m6.4s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_setup_experimental'] 0m6.4s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_setup_forbid_home'] 0m6.4s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_setup_forbid_home'] 0m6.4s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m11.8s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 248kB of archives. After this operation, 1229kB of additional disk space will be used. Get:1 http://archive.debian.org lenny/main adduser 3.110 [184kB] Get:2 http://archive.debian.org lenny/main ucf 3.0016 [64.4kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 248kB in 0s (635kB/s) Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package adduser. (Reading database ... 5915 files and directories currently installed.) Unpacking adduser (from .../archives/adduser_3.110_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../archives/ucf_3.0016_all.deb) ... Moving old data out of the way Can not write log, openpty() failed (/dev/pts not mounted?) Setting up adduser (3.110) ... Setting up ucf (3.0016) ... 0m11.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m11.8s DEBUG: Upgrading /org/piuparts.debian.org/tmp/tmpTzQXL2 to squeeze 0m11.8s DEBUG: sources.list: deb http://piatti.debian.org/debian/ squeeze main deb http://piatti.debian.org/debian/ squeeze contrib deb http://piatti.debian.org/debian/ squeeze non-free 0m11.8s INFO: Running scripts pre_distupgrade 0m11.8s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.8s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.9s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.9s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', 'update'] 0m19.3s DUMP: Get:1 http://piatti.debian.org squeeze Release.gpg [1672B] Get:2 http://piatti.debian.org squeeze Release [99.8kB] Get:3 http://piatti.debian.org squeeze/main Packages [8602kB] Get:4 http://piatti.debian.org squeeze/contrib Packages [64.1kB] Get:5 http://piatti.debian.org squeeze/non-free Packages [124kB] Fetched 8892kB in 1s (5991kB/s) Reading package lists... 0m19.3s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', 'update'] 0m19.3s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', '-yf', 'dist-upgrade'] 0m49.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: dash diffutils dmsetup gcc-4.4-base insserv libc-bin libdb4.8 liblzma2 libncursesw5 libreadline6 libudev0 sensible-utils xz-utils The following packages will be upgraded: adduser apt base-files base-passwd bash bsdutils coreutils debconf debconf-i18n debian-archive-keyring debianutils diff dpkg e2fslibs e2fsprogs findutils gcc-4.3-base gnupg gpgv grep gzip hostname initscripts libacl1 libattr1 libblkid1 libbz2-1.0 libc6 libcomerr2 libdb4.6 libdevmapper1.02.1 libgcc1 liblocale-gettext-perl libncurses5 libpam-modules libpam-runtime libpam0g libreadline5 libselinux1 libsepol1 libslang2 libss2 libstdc++6 libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libusb-0.1-4 libuuid1 login lsb-base makedev mawk mktemp mount ncurses-base ncurses-bin passwd perl-base procps readline-common sed sysv-rc sysvinit sysvinit-utils tar tzdata ucf util-linux zlib1g 69 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. Need to get 34.7MB of archives. After this operation, 12.9MB of additional disk space will be used. Get:1 http://piatti.debian.org squeeze/main base-files 6.0squeeze7 [68.8kB] Get:2 http://piatti.debian.org squeeze/main libc-bin 2.11.3-4 [749kB] Get:3 http://piatti.debian.org squeeze/main libc6 2.11.3-4 [4282kB] Get:4 http://piatti.debian.org squeeze/main gcc-4.4-base 4.4.5-8 [123kB] Get:5 http://piatti.debian.org squeeze/main libgcc1 1:4.4.5-8 [45.0kB] Get:6 http://piatti.debian.org squeeze/main liblzma2 5.0.0-2 [184kB] Get:7 http://piatti.debian.org squeeze/main xz-utils 5.0.0-2 [201kB] Get:8 http://piatti.debian.org squeeze/main dpkg 1.15.8.13 [2399kB] Get:9 http://piatti.debian.org squeeze/main sensible-utils 0.0.4 [5408B] Get:10 http://piatti.debian.org squeeze/main debianutils 3.4 [49.9kB] Get:11 http://piatti.debian.org squeeze/main dash 0.5.5.1-7.4 [108kB] Get:12 http://piatti.debian.org squeeze/main libncurses5 5.7+20100313-5 [365kB] Get:13 http://piatti.debian.org squeeze/main bash 4.1-3 [1325kB] Get:14 http://piatti.debian.org squeeze/main coreutils 8.5-1 [5102kB] Get:15 http://piatti.debian.org squeeze/main diffutils 1:3.0-1 [361kB] Get:16 http://piatti.debian.org squeeze/main e2fslibs 1.41.12-4stable1 [145kB] Get:17 http://piatti.debian.org squeeze/main perl-base 5.10.1-17squeeze5 [1059kB] Get:18 http://piatti.debian.org squeeze/main liblocale-gettext-perl 1.05-6 [21.6kB] Get:19 http://piatti.debian.org squeeze/main libtext-iconv-perl 1.7-2 [18.5kB] Get:20 http://piatti.debian.org squeeze/main libtext-charwidth-perl 0.04-6 [11.9kB] Get:21 http://piatti.debian.org squeeze/main libtext-wrapi18n-perl 0.06-7 [9004B] Get:22 http://piatti.debian.org squeeze/main debconf-i18n 1.5.36.1 [210kB] Get:23 http://piatti.debian.org squeeze/main debconf 1.5.36.1 [162kB] Get:24 http://piatti.debian.org squeeze/main libpam0g 1.1.1-6.1+squeeze1 [118kB] Get:25 http://piatti.debian.org squeeze/main libselinux1 2.0.96-1 [88.3kB] Get:26 http://piatti.debian.org squeeze/main libdb4.8 4.8.30-2 [696kB] Get:27 http://piatti.debian.org squeeze/main libpam-modules 1.1.1-6.1+squeeze1 [364kB] Get:28 http://piatti.debian.org squeeze/main passwd 1:4.1.4.2+svn3283-2+squeeze1 [1113kB] Get:29 http://piatti.debian.org squeeze/main libuuid1 2.17.2-9 [59.3kB] Get:30 http://piatti.debian.org squeeze/main libblkid1 2.17.2-9 [109kB] Get:31 http://piatti.debian.org squeeze/main sed 4.2.1-7 [251kB] Get:32 http://piatti.debian.org squeeze/main ncurses-bin 5.7+20100313-5 [320kB] Get:33 http://piatti.debian.org squeeze/main lsb-base 3.2-23.2squeeze1 [20.5kB] Get:34 http://piatti.debian.org squeeze/main tzdata 2012g-0squeeze1 [642kB] Get:35 http://piatti.debian.org squeeze/main sysvinit-utils 2.88dsf-13.1+squeeze1 [122kB] Get:36 http://piatti.debian.org squeeze/main mount 2.17.2-9 [178kB] Get:37 http://piatti.debian.org squeeze/main initscripts 2.88dsf-13.1+squeeze1 [70.6kB] Get:38 http://piatti.debian.org squeeze/main insserv 1.14.0-2 [71.0kB] Get:39 http://piatti.debian.org squeeze/main sysv-rc 2.88dsf-13.1+squeeze1 [73.9kB] Get:40 http://piatti.debian.org squeeze/main util-linux 2.17.2-9 [739kB] Get:41 http://piatti.debian.org squeeze/main e2fsprogs 1.41.12-4stable1 [818kB] Get:42 http://piatti.debian.org squeeze/main findutils 4.4.2-1+b1 [689kB] Get:43 http://piatti.debian.org squeeze/main grep 2.6.3-3 [308kB] Get:44 http://piatti.debian.org squeeze/main gzip 1.3.12-9+squeeze1 [108kB] Get:45 http://piatti.debian.org squeeze/main hostname 3.04 [15.7kB] Get:46 http://piatti.debian.org squeeze/main login 1:4.1.4.2+svn3283-2+squeeze1 [783kB] Get:47 http://piatti.debian.org squeeze/main libsepol1 2.0.41-1 [132kB] Get:48 http://piatti.debian.org squeeze/main sysvinit 2.88dsf-13.1+squeeze1 [121kB] Get:49 http://piatti.debian.org squeeze/main tar 1.23-3 [931kB] Get:50 http://piatti.debian.org squeeze/main diff 1:3.0-1 [6490B] Get:51 http://piatti.debian.org squeeze/main mktemp 8.5-1 [14.8kB] Get:52 http://piatti.debian.org squeeze/main base-passwd 3.5.22 [41.9kB] Get:53 http://piatti.debian.org squeeze/main bsdutils 1:2.17.2-9 [80.3kB] Get:54 http://piatti.debian.org squeeze/main ncurses-base 5.7+20100313-5 [188kB] Get:55 http://piatti.debian.org squeeze/main mawk 1.3.3-15 [90.1kB] Get:56 http://piatti.debian.org squeeze/main libstdc++6 4.4.5-8 [341kB] Get:57 http://piatti.debian.org squeeze/main zlib1g 1:1.2.3.4.dfsg-3 [79.2kB] Get:58 http://piatti.debian.org squeeze/main readline-common 6.1-3 [54.0kB] Get:59 http://piatti.debian.org squeeze/main libreadline6 6.1-3 [161kB] Get:60 http://piatti.debian.org squeeze/main libbz2-1.0 1.0.5-6+squeeze1 [46.3kB] Get:61 http://piatti.debian.org squeeze/main libusb-0.1-4 2:0.1.12-16 [21.9kB] Get:62 http://piatti.debian.org squeeze/main gpgv 1.4.10-4+squeeze1 [222kB] Get:63 http://piatti.debian.org squeeze/main gnupg 1.4.10-4+squeeze1 [2148kB] Get:64 http://piatti.debian.org squeeze/main debian-archive-keyring 2010.08.28+squeeze1 [26.2kB] Get:65 http://piatti.debian.org squeeze/main apt 0.8.10.3+squeeze1 [2174kB] Get:66 http://piatti.debian.org squeeze/main libslang2 2.2.2-4 [546kB] Get:67 http://piatti.debian.org squeeze/main libattr1 1:2.4.44-2 [12.8kB] Get:68 http://piatti.debian.org squeeze/main libacl1 2.2.49-4 [28.3kB] Get:69 http://piatti.debian.org squeeze/main libcomerr2 1.41.12-4stable1 [49.8kB] Get:70 http://piatti.debian.org squeeze/main libpam-runtime 1.1.1-6.1+squeeze1 [225kB] Get:71 http://piatti.debian.org squeeze/main libss2 1.41.12-4stable1 [55.0kB] Get:72 http://piatti.debian.org squeeze/main gcc-4.3-base 4.3.5-4 [110kB] Get:73 http://piatti.debian.org squeeze/main adduser 3.112+nmu2 [250kB] Get:74 http://piatti.debian.org squeeze/main libncursesw5 5.7+20100313-5 [390kB] Get:75 http://piatti.debian.org squeeze/main libudev0 164-3 [115kB] Get:76 http://piatti.debian.org squeeze/main procps 1:3.2.8-9squeeze1 [249kB] Get:77 http://piatti.debian.org squeeze/main libdb4.6 4.6.21-16 [600kB] Get:78 http://piatti.debian.org squeeze/main ucf 3.0025+nmu1 [69.6kB] Get:79 http://piatti.debian.org squeeze/main libdevmapper1.02.1 2:1.02.48-5 [85.4kB] Get:80 http://piatti.debian.org squeeze/main dmsetup 2:1.02.48-5 [56.7kB] Get:81 http://piatti.debian.org squeeze/main libreadline5 5.2-7 [146kB] Get:82 http://piatti.debian.org squeeze/main makedev 2.3.1-89 [42.4kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 34.7MB in 0s (37.6MB/s) Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6013 files and directories currently installed.) Preparing to replace base-files 5lenny11 (using .../base-files_6.0squeeze7_amd64.deb) ... Unpacking replacement base-files ... Replacing files in old package dpkg ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up base-files (6.0squeeze7) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package libc-bin. dpkg: considering deconfiguration of libc6, which would be broken by installation of libc-bin ... dpkg: yes, will deconfigure libc6 (broken by libc-bin). (Reading database ... 6015 files and directories currently installed.) Unpacking libc-bin (from .../libc-bin_2.11.3-4_amd64.deb) ... De-configuring libc6 ... Replacing files in old package libc6 ... Preparing to replace libc6 2.7-18lenny7 (using .../libc6_2.11.3-4_amd64.deb) ... Removing obsolete conffile /etc/init.d/glibc.sh ... Checking for services that may need to be restarted... Checking init scripts... Unpacking replacement libc6 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libc-bin (2.11.3-4) ... Installing new version of config file /etc/gai.conf ... Installing new version of config file /etc/bindresvport.blacklist ... Setting up libc6 (2.11.3-4) ... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package gcc-4.4-base. (Reading database ... 6016 files and directories currently installed.) Unpacking gcc-4.4-base (from .../gcc-4.4-base_4.4.5-8_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gcc-4.4-base (4.4.5-8) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6024 files and directories currently installed.) Preparing to replace libgcc1 1:4.3.2-1.1 (using .../libgcc1_1%3a4.4.5-8_amd64.deb) ... Unpacking replacement libgcc1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libgcc1 (1:4.4.5-8) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package liblzma2. (Reading database ... 6024 files and directories currently installed.) Unpacking liblzma2 (from .../liblzma2_5.0.0-2_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up liblzma2 (5.0.0-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package xz-utils. (Reading database ... 6034 files and directories currently installed.) Unpacking xz-utils (from .../xz-utils_5.0.0-2_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up xz-utils (5.0.0-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6076 files and directories currently installed.) Preparing to replace dpkg 1.14.31 (using .../dpkg_1.15.8.13_amd64.deb) ... Unpacking replacement dpkg ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up dpkg (1.15.8.13) ... Installing new version of config file /etc/logrotate.d/dpkg ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package sensible-utils. (Reading database ... 6082 files and directories currently installed.) Unpacking sensible-utils (from .../sensible-utils_0.0.4_all.deb) ... Replacing files in old package debianutils ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sensible-utils (0.0.4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6089 files and directories currently installed.) Preparing to replace debianutils 2.30 (using .../debianutils_3.4_amd64.deb) ... Unpacking replacement debianutils ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up debianutils (3.4) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package dash. (Reading database ... 6085 files and directories currently installed.) Unpacking dash (from .../dash_0.5.5.1-7.4_amd64.deb) ... Adding 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Can not write log, openpty() failed (/dev/pts not mounted?) Setting up dash (0.5.5.1-7.4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6097 files and directories currently installed.) Preparing to replace libncurses5 5.7+20081213-1 (using .../libncurses5_5.7+20100313-5_amd64.deb) ... Unpacking replacement libncurses5 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libncurses5 (5.7+20100313-5) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6097 files and directories currently installed.) Preparing to replace bash 3.2-4 (using .../archives/bash_4.1-3_amd64.deb) ... Unpacking replacement bash ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up bash (4.1-3) ... Installing new version of config file /etc/bash.bashrc ... Installing new version of config file /etc/skel/.bashrc ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode. Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6120 files and directories currently installed.) Preparing to replace coreutils 6.10-6 (using .../coreutils_8.5-1_amd64.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package coreutils should be updated. Unpacking replacement coreutils ... Replacing files in old package mktemp ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up coreutils (8.5-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package diffutils. (Reading database ... 6146 files and directories currently installed.) Unpacking diffutils (from .../diffutils_1%3a3.0-1_amd64.deb) ... Replacing files in old package diff ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up diffutils (1:3.0-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6168 files and directories currently installed.) Preparing to replace e2fslibs 1.41.3-1 (using .../e2fslibs_1.41.12-4stable1_amd64.deb) ... Unpacking replacement e2fslibs ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up e2fslibs (1.41.12-4stable1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6168 files and directories currently installed.) Preparing to replace perl-base 5.10.0-19lenny5 (using .../perl-base_5.10.1-17squeeze5_amd64.deb) ... Unpacking replacement perl-base ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up perl-base (5.10.1-17squeeze5) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6216 files and directories currently installed.) Preparing to replace liblocale-gettext-perl 1.05-4 (using .../liblocale-gettext-perl_1.05-6_amd64.deb) ... Unpacking replacement liblocale-gettext-perl ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up liblocale-gettext-perl (1.05-6) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6216 files and directories currently installed.) Preparing to replace libtext-iconv-perl 1.7-1+b1 (using .../libtext-iconv-perl_1.7-2_amd64.deb) ... Unpacking replacement libtext-iconv-perl ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libtext-iconv-perl (1.7-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6217 files and directories currently installed.) Preparing to replace libtext-charwidth-perl 0.04-5+b1 (using .../libtext-charwidth-perl_0.04-6_amd64.deb) ... Unpacking replacement libtext-charwidth-perl ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libtext-charwidth-perl (0.04-6) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6217 files and directories currently installed.) Preparing to replace libtext-wrapi18n-perl 0.06-6 (using .../libtext-wrapi18n-perl_0.06-7_all.deb) ... Unpacking replacement libtext-wrapi18n-perl ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libtext-wrapi18n-perl (0.06-7) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6217 files and directories currently installed.) Preparing to replace debconf-i18n 1.5.24 (using .../debconf-i18n_1.5.36.1_all.deb) ... Unpacking replacement debconf-i18n ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up debconf-i18n (1.5.36.1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6234 files and directories currently installed.) Preparing to replace debconf 1.5.24 (using .../debconf_1.5.36.1_all.deb) ... Unpacking replacement debconf ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up debconf (1.5.36.1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6238 files and directories currently installed.) Preparing to replace libpam0g 1.0.1-5+lenny1 (using .../libpam0g_1.1.1-6.1+squeeze1_amd64.deb) ... Unpacking replacement libpam0g ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libpam0g (1.1.1-6.1+squeeze1) ... Checking for services that may need to be restarted...Checking init scripts... Nothing to restart. Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6238 files and directories currently installed.) Preparing to replace libselinux1 2.0.65-5 (using .../libselinux1_2.0.96-1_amd64.deb) ... Unpacking replacement libselinux1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libselinux1 (2.0.96-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package libdb4.8. (Reading database ... 6238 files and directories currently installed.) Unpacking libdb4.8 (from .../libdb4.8_4.8.30-2_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libdb4.8 (4.8.30-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6242 files and directories currently installed.) Preparing to replace libpam-modules 1.0.1-5+lenny1 (using .../libpam-modules_1.1.1-6.1+squeeze1_amd64.deb) ... Unpacking replacement libpam-modules ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libpam-modules (1.1.1-6.1+squeeze1) ... Installing new version of config file /etc/security/namespace.init ... Installing new version of config file /etc/security/limits.conf ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6248 files and directories currently installed.) Preparing to replace passwd 1:4.1.1-6+lenny1 (using .../passwd_1%3a4.1.4.2+svn3283-2+squeeze1_amd64.deb) ... Unpacking replacement passwd ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up passwd (1:4.1.4.2+svn3283-2+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6245 files and directories currently installed.) Preparing to replace libuuid1 1.41.3-1 (using .../libuuid1_2.17.2-9_amd64.deb) ... Unpacking replacement libuuid1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libuuid1 (2.17.2-9) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6245 files and directories currently installed.) Preparing to replace libblkid1 1.41.3-1 (using .../libblkid1_2.17.2-9_amd64.deb) ... Unpacking replacement libblkid1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libblkid1 (2.17.2-9) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6246 files and directories currently installed.) Preparing to replace sed 4.1.5-6 (using .../archives/sed_4.2.1-7_amd64.deb) ... Unpacking replacement sed ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sed (4.2.1-7) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6249 files and directories currently installed.) Preparing to replace ncurses-bin 5.7+20081213-1 (using .../ncurses-bin_5.7+20100313-5_amd64.deb) ... Unpacking replacement ncurses-bin ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up ncurses-bin (5.7+20100313-5) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6251 files and directories currently installed.) Preparing to replace lsb-base 3.2-20 (using .../lsb-base_3.2-23.2squeeze1_all.deb) ... Unpacking replacement lsb-base ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up lsb-base (3.2-23.2squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6251 files and directories currently installed.) Preparing to replace tzdata 2011k-0lenny1 (using .../tzdata_2012g-0squeeze1_all.deb) ... Unpacking replacement tzdata ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up tzdata (2012g-0squeeze1) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Mar 26 00:22:37 UTC 2013. Universal Time is now: Tue Mar 26 00:22:37 UTC 2013. Run 'dpkg-reconfigure tzdata' if you wish to change it. Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6257 files and directories currently installed.) Preparing to replace sysvinit-utils 2.86.ds1-61 (using .../sysvinit-utils_2.88dsf-13.1+squeeze1_amd64.deb) ... Unpacking replacement sysvinit-utils ... Replacing files in old package sysvinit ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sysvinit-utils (2.88dsf-13.1+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6261 files and directories currently installed.) Preparing to replace mount 2.13.1.1-1 (using .../mount_2.17.2-9_amd64.deb) ... Unpacking replacement mount ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up mount (2.17.2-9) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6262 files and directories currently installed.) Preparing to replace initscripts 2.86.ds1-61 (using .../initscripts_2.88dsf-13.1+squeeze1_amd64.deb) ... Unpacking replacement initscripts ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up initscripts (2.88dsf-13.1+squeeze1) ... Installing new version of config file /etc/init.d/bootlogd ... Installing new version of config file /etc/init.d/stop-bootlogd ... Installing new version of config file /etc/init.d/stop-bootlogd-single ... Installing new version of config file /etc/init.d/bootmisc.sh ... Installing new version of config file /etc/init.d/checkfs.sh ... Installing new version of config file /etc/init.d/checkroot.sh ... Installing new version of config file /etc/init.d/hostname.sh ... Installing new version of config file /etc/init.d/killprocs ... Installing new version of config file /etc/init.d/mountall.sh ... Installing new version of config file /etc/init.d/mountnfs-bootclean.sh ... Installing new version of config file /etc/init.d/mountoverflowtmp ... Installing new version of config file /etc/init.d/mountdevsubfs.sh ... Installing new version of config file /etc/init.d/mountkernfs.sh ... Installing new version of config file /etc/init.d/mtab.sh ... Installing new version of config file /etc/init.d/rc.local ... Installing new version of config file /etc/init.d/rmnologin ... Installing new version of config file /etc/init.d/sendsigs ... Installing new version of config file /etc/init.d/umountfs ... Installing new version of config file /etc/init.d/umountnfs.sh ... Installing new version of config file /etc/init.d/urandom ... Installing new version of config file /etc/network/if-up.d/mountnfs ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package insserv. dpkg: considering deconfiguration of sysv-rc, which would be broken by installation of insserv ... dpkg: yes, will deconfigure sysv-rc (broken by insserv). (Reading database ... 6265 files and directories currently installed.) Unpacking insserv (from .../insserv_1.14.0-2_amd64.deb) ... De-configuring sysv-rc ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up insserv (1.14.0-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6294 files and directories currently installed.) Preparing to replace sysv-rc 2.86.ds1-61 (using .../sysv-rc_2.88dsf-13.1+squeeze1_all.deb) ... Unpacking replacement sysv-rc ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sysv-rc (2.88dsf-13.1+squeeze1) ... info: Checking if it is safe to convert to dependency based boot. info: Reordering boot system, log to /var/lib/insserv/run-20130326T0022.log success: Enabled dependency based boot system. Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6295 files and directories currently installed.) Preparing to replace util-linux 2.13.1.1-1 (using .../util-linux_2.17.2-9_amd64.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package util-linux should be updated. Unpacking replacement util-linux ... Replacing files in old package e2fsprogs ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up util-linux (2.17.2-9) ... Installing new version of config file /etc/init.d/hwclockfirst.sh ... Installing new version of config file /etc/init.d/hwclock.sh ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6313 files and directories currently installed.) Preparing to replace e2fsprogs 1.41.3-1 (using .../e2fsprogs_1.41.12-4stable1_amd64.deb) ... Unpacking replacement e2fsprogs ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up e2fsprogs (1.41.12-4stable1) ... Installing new version of config file /etc/mke2fs.conf ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6316 files and directories currently installed.) Preparing to replace findutils 4.4.0-2 (using .../findutils_4.4.2-1+b1_amd64.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package findutils should be updated. Unpacking replacement findutils ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up findutils (4.4.2-1+b1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6318 files and directories currently installed.) Preparing to replace grep 2.5.3~dfsg-6 (using .../grep_2.6.3-3_amd64.deb) ... Unpacking replacement grep ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up grep (2.6.3-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6320 files and directories currently installed.) Preparing to replace gzip 1.3.12-6+lenny1 (using .../gzip_1.3.12-9+squeeze1_amd64.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package gzip should be updated. Unpacking replacement gzip ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gzip (1.3.12-9+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6320 files and directories currently installed.) Preparing to replace hostname 2.95 (using .../hostname_3.04_amd64.deb) ... Unpacking replacement hostname ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up hostname (3.04) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6326 files and directories currently installed.) Preparing to replace login 1:4.1.1-6+lenny1 (using .../login_1%3a4.1.4.2+svn3283-2+squeeze1_amd64.deb) ... Unpacking replacement login ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up login (1:4.1.4.2+svn3283-2+squeeze1) ... Installing new version of config file /etc/securetty ... Installing new version of config file /etc/pam.d/login ... Installing new version of config file /etc/login.defs ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6323 files and directories currently installed.) Preparing to replace libsepol1 2.0.30-2 (using .../libsepol1_2.0.41-1_amd64.deb) ... Unpacking replacement libsepol1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libsepol1 (2.0.41-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6323 files and directories currently installed.) Preparing to replace sysvinit 2.86.ds1-61 (using .../sysvinit_2.88dsf-13.1+squeeze1_amd64.deb) ... Unpacking replacement sysvinit ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sysvinit (2.88dsf-13.1+squeeze1) ... init: timeout opening/writing control channel /dev/initctl Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6324 files and directories currently installed.) Preparing to replace tar 1.20-1+lenny1 (using .../archives/tar_1.23-3_amd64.deb) ... Unpacking replacement tar ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up tar (1.23-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6324 files and directories currently installed.) Preparing to replace diff 2.8.1-12 (using .../diff_1%3a3.0-1_all.deb) ... Unpacking replacement diff ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up diff (1:3.0-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6321 files and directories currently installed.) Preparing to replace mktemp 1.5-9 (using .../archives/mktemp_8.5-1_all.deb) ... Unpacking replacement mktemp ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up mktemp (8.5-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6321 files and directories currently installed.) Preparing to replace base-passwd 3.5.20 (using .../base-passwd_3.5.22_amd64.deb) ... Unpacking replacement base-passwd ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up base-passwd (3.5.22) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6321 files and directories currently installed.) Preparing to replace bsdutils 1:2.13.1.1-1 (using .../bsdutils_1%3a2.17.2-9_amd64.deb) ... Unpacking replacement bsdutils ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up bsdutils (1:2.17.2-9) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6322 files and directories currently installed.) Preparing to replace ncurses-base 5.7+20081213-1 (using .../ncurses-base_5.7+20100313-5_all.deb) ... Unpacking replacement ncurses-base ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up ncurses-base (5.7+20100313-5) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6273 files and directories currently installed.) Preparing to replace mawk 1.3.3-11.1 (using .../mawk_1.3.3-15_amd64.deb) ... Unpacking replacement mawk ... Preparing to replace libstdc++6 4.3.2-1.1 (using .../libstdc++6_4.4.5-8_amd64.deb) ... Unpacking replacement libstdc++6 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libstdc++6 (4.4.5-8) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6273 files and directories currently installed.) Preparing to replace zlib1g 1:1.2.3.3.dfsg-12 (using .../zlib1g_1%3a1.2.3.4.dfsg-3_amd64.deb) ... Unpacking replacement zlib1g ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up zlib1g (1:1.2.3.4.dfsg-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6273 files and directories currently installed.) Preparing to replace readline-common 5.2-3.1 (using .../readline-common_6.1-3_all.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package readline-common should be updated. Unpacking replacement readline-common ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up readline-common (6.1-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package libreadline6. (Reading database ... 6273 files and directories currently installed.) Unpacking libreadline6 (from .../libreadline6_6.1-3_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libreadline6 (6.1-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6286 files and directories currently installed.) Preparing to replace libbz2-1.0 1.0.5-1+lenny1 (using .../libbz2-1.0_1.0.5-6+squeeze1_amd64.deb) ... Unpacking replacement libbz2-1.0 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libbz2-1.0 (1.0.5-6+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6286 files and directories currently installed.) Preparing to replace libusb-0.1-4 2:0.1.12-13 (using .../libusb-0.1-4_2%3a0.1.12-16_amd64.deb) ... Unpacking replacement libusb-0.1-4 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libusb-0.1-4 (2:0.1.12-16) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6286 files and directories currently installed.) Preparing to replace gpgv 1.4.9-3+lenny1 (using .../gpgv_1.4.10-4+squeeze1_amd64.deb) ... Unpacking replacement gpgv ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gpgv (1.4.10-4+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6287 files and directories currently installed.) Preparing to replace gnupg 1.4.9-3+lenny1 (using .../gnupg_1.4.10-4+squeeze1_amd64.deb) ... Unpacking replacement gnupg ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gnupg (1.4.10-4+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6295 files and directories currently installed.) Preparing to replace debian-archive-keyring 2010.08.28~lenny1 (using .../debian-archive-keyring_2010.08.28+squeeze1_all.deb) ... Unpacking replacement debian-archive-keyring ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up debian-archive-keyring (2010.08.28+squeeze1) ... gpg: key F42584E6: "Lenny Stable Release Key " not changed gpg: key 55BE302B: "Debian Archive Automatic Signing Key (5.0/lenny) " not changed gpg: key 6D849617: "Debian-Volatile Archive Automatic Signing Key (5.0/lenny)" not changed gpg: key B98321F9: "Squeeze Stable Release Key " not changed gpg: key 473041FA: "Debian Archive Automatic Signing Key (6.0/squeeze) " not changed gpg: key 46925553: public key "Debian Archive Automatic Signing Key (7.0/wheezy) " imported gpg: key 65FFB764: public key "Wheezy Stable Release Key " imported gpg: Total number processed: 7 gpg: imported: 2 (RSA: 2) gpg: unchanged: 5 gpg: no ultimately trusted keys found Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6295 files and directories currently installed.) Preparing to replace apt 0.7.20.2+lenny2 (using .../apt_0.8.10.3+squeeze1_amd64.deb) ... Unpacking replacement apt ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up apt (0.8.10.3+squeeze1) ... Installing new version of config file /etc/cron.daily/apt ... Installing new version of config file /etc/logrotate.d/apt ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... gpg: key F42584E6: "Lenny Stable Release Key " not changed gpg: key 55BE302B: "Debian Archive Automatic Signing Key (5.0/lenny) " not changed gpg: key 6D849617: "Debian-Volatile Archive Automatic Signing Key (5.0/lenny)" not changed gpg: key B98321F9: "Squeeze Stable Release Key " not changed gpg: key 473041FA: "Debian Archive Automatic Signing Key (6.0/squeeze) " not changed gpg: key 46925553: "Debian Archive Automatic Signing Key (7.0/wheezy) " not changed gpg: key 65FFB764: "Wheezy Stable Release Key " not changed gpg: Total number processed: 7 gpg: unchanged: 7 Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6339 files and directories currently installed.) Preparing to replace libslang2 2.1.3-3 (using .../libslang2_2.2.2-4_amd64.deb) ... Unpacking replacement libslang2 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libslang2 (2.2.2-4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6339 files and directories currently installed.) Preparing to replace libattr1 1:2.4.43-2 (using .../libattr1_1%3a2.4.44-2_amd64.deb) ... Unpacking replacement libattr1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libattr1 (1:2.4.44-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6339 files and directories currently installed.) Preparing to replace libacl1 2.2.47-2 (using .../libacl1_2.2.49-4_amd64.deb) ... Unpacking replacement libacl1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libacl1 (2.2.49-4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6340 files and directories currently installed.) Preparing to replace libcomerr2 1.41.3-1 (using .../libcomerr2_1.41.12-4stable1_amd64.deb) ... Unpacking replacement libcomerr2 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libcomerr2 (1.41.12-4stable1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6340 files and directories currently installed.) Preparing to replace libpam-runtime 1.0.1-5+lenny1 (using .../libpam-runtime_1.1.1-6.1+squeeze1_all.deb) ... Unpacking replacement libpam-runtime ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libpam-runtime (1.1.1-6.1+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6357 files and directories currently installed.) Preparing to replace libss2 1.41.3-1 (using .../libss2_1.41.12-4stable1_amd64.deb) ... Unpacking replacement libss2 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libss2 (1.41.12-4stable1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6357 files and directories currently installed.) Preparing to replace gcc-4.3-base 4.3.2-1.1 (using .../gcc-4.3-base_4.3.5-4_amd64.deb) ... Unpacking replacement gcc-4.3-base ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gcc-4.3-base (4.3.5-4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 6356 files and directories currently installed.) Preparing to replace adduser 3.110 (using .../adduser_3.112+nmu2_all.deb) ... Unpacking replacement adduser ... Selecting previously deselected package libncursesw5. Unpacking libncursesw5 (from .../libncursesw5_5.7+20100313-5_amd64.deb) ... Selecting previously deselected package libudev0. Unpacking libudev0 (from .../libudev0_164-3_amd64.deb) ... Preparing to replace procps 1:3.2.7-11 (using .../procps_1%3a3.2.8-9squeeze1_amd64.deb) ... invoke-rc.d: policy-rc.d denied execution of stop. Unpacking replacement procps ... Preparing to replace libdb4.6 4.6.21-11 (using .../libdb4.6_4.6.21-16_amd64.deb) ... Unpacking replacement libdb4.6 ... Preparing to replace ucf 3.0016 (using .../ucf_3.0025+nmu1_all.deb) ... Unpacking replacement ucf ... Preparing to replace libdevmapper1.02.1 2:1.02.27-4 (using .../libdevmapper1.02.1_2%3a1.02.48-5_amd64.deb) ... Unpacking replacement libdevmapper1.02.1 ... Selecting previously deselected package dmsetup. Unpacking dmsetup (from .../dmsetup_2%3a1.02.48-5_amd64.deb) ... Preparing to replace libreadline5 5.2-3.1 (using .../libreadline5_5.2-7_amd64.deb) ... Unpacking replacement libreadline5 ... Preparing to replace makedev 2.3.1-88 (using .../makedev_2.3.1-89_all.deb) ... Unpacking replacement makedev ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up mawk (1.3.3-15) ... Setting up adduser (3.112+nmu2) ... Setting up libncursesw5 (5.7+20100313-5) ... Setting up libudev0 (164-3) ... Setting up procps (1:3.2.8-9squeeze1) ... Installing new version of config file /etc/init.d/procps ... Installing new version of config file /etc/sysctl.conf ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libdb4.6 (4.6.21-16) ... Setting up ucf (3.0025+nmu1) ... Setting up libreadline5 (5.2-7) ... Setting up makedev (2.3.1-89) ... Setting up dmsetup (2:1.02.48-5) ... Setting up libdevmapper1.02.1 (2:1.02.48-5) ... 0m49.9s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', '-yf', 'dist-upgrade'] 0m49.9s INFO: Running scripts post_distupgrade 0m49.9s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_distupgrade_exceptions'] 0m50.0s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_distupgrade_exceptions'] 0m50.0s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_distupgrade_experimental'] 0m50.0s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_distupgrade_experimental'] 0m50.0s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_distupgrade_hack_debsums'] 0m50.0s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_distupgrade_hack_debsums'] 0m50.0s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_distupgrade_squeeze-fake-essential'] 0m50.0s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'tmp/scripts/post_distupgrade_squeeze-fake-essential'] 0m50.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpTzQXL2'] 0m50.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpTzQXL2'] 0m50.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpTzQXL2'] 0m50.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpTzQXL2'] 0m50.7s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', 'clean'] 0m50.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'apt-get', 'clean'] 0m51.4s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'dpkg', '--get-selections', '*'] 0m51.4s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diff install diffutils install dmsetup install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.2-base install gcc-4.3-base install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.6 install libdb4.8 install libdevmapper1.02.1 install libgcc1 install liblocale-gettext-perl install liblzma2 install libncurses5 install libncursesw5 install libpam-modules install libpam-runtime install libpam0g install libreadline5 install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libudev0 install libusb-0.1-4 install libuuid1 install login install lsb-base install lzma install makedev install mawk install mktemp install mount install ncurses-base install ncurses-bin install passwd install perl-base install procps install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m51.4s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'dpkg', '--get-selections', '*'] 0m51.4s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'dpkg-divert', '--list'] 0m51.4s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash diversion of /bin/sh to /bin/sh.distrib by dash 0m51.4s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'dpkg-divert', '--list'] 0m51.7s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'umount', '/proc'] 0m51.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpTzQXL2', 'umount', '/proc'] 0m51.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/org/piuparts.debian.org/tmp/tmpTzQXL2'] 0m52.1s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/org/piuparts.debian.org/tmp/tmpTzQXL2'] 0m52.1s DEBUG: Removed directory tree at /org/piuparts.debian.org/tmp/tmpTzQXL2 0m52.1s INFO: Notice: package selections and meta data from target distro saved, now starting over from source distro. See the description of --save-end-meta and --end-meta to learn why this is neccessary and how to possibly avoid it. 0m52.1s DEBUG: Created temporary directory /org/piuparts.debian.org/tmp/tmpxYqlAQ 0m52.1s DEBUG: Unpacking /org/piuparts.debian.org/slave/basetgz/lenny.tar.gz into /org/piuparts.debian.org/tmp/tmpxYqlAQ 0m52.1s DEBUG: Starting command: ['tar', '-C', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', '-zxf', '/org/piuparts.debian.org/slave/basetgz/lenny.tar.gz'] 0m56.9s DEBUG: Command ok: ['tar', '-C', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', '-zxf', '/org/piuparts.debian.org/slave/basetgz/lenny.tar.gz'] 0m56.9s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'mount', '-t', 'proc', 'proc', '/proc'] 0m56.9s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'mount', '-t', 'proc', 'proc', '/proc'] 0m56.9s DEBUG: sources.list: deb http://archive.debian.org/debian lenny main deb http://archive.debian.org/debian lenny contrib deb http://archive.debian.org/debian lenny non-free 0m56.9s DEBUG: Created policy-rc.d and chmodded it. 0m56.9s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', 'update'] 0m57.2s DUMP: Hit http://archive.debian.org lenny Release.gpg Hit http://archive.debian.org lenny Release Ign http://archive.debian.org lenny/main Packages/DiffIndex Ign http://archive.debian.org lenny/contrib Packages/DiffIndex Ign http://archive.debian.org lenny/non-free Packages/DiffIndex Hit http://archive.debian.org lenny/main Packages Hit http://archive.debian.org lenny/contrib Packages Hit http://archive.debian.org lenny/non-free Packages Reading package lists... 0m57.2s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', 'update'] 0m57.2s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', '-yf', 'dist-upgrade'] 0m57.5s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m57.5s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', '-yf', 'dist-upgrade'] 0m57.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /org/piuparts.debian.org/tmp/tmpxYqlAQ/tmp/scripts/ 0m57.6s DEBUG: Copying scriptsdir /etc/piuparts/scripts-squeeze to /org/piuparts.debian.org/tmp/tmpxYqlAQ/tmp/scripts/ 0m57.6s INFO: Running scripts post_setup 0m57.6s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_setup_experimental'] 0m57.6s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_setup_experimental'] 0m57.6s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_setup_forbid_home'] 0m57.6s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_setup_forbid_home'] 0m57.6s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_setup_squeeze-fake-essential'] 1m4.4s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 248kB of archives. After this operation, 1229kB of additional disk space will be used. Get:1 http://archive.debian.org lenny/main adduser 3.110 [184kB] Get:2 http://archive.debian.org lenny/main ucf 3.0016 [64.4kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 248kB in 0s (637kB/s) Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package adduser. (Reading database ... 5915 files and directories currently installed.) Unpacking adduser (from .../archives/adduser_3.110_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../archives/ucf_3.0016_all.deb) ... Moving old data out of the way Can not write log, openpty() failed (/dev/pts not mounted?) Setting up adduser (3.110) ... Setting up ucf (3.0016) ... 1m4.4s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_setup_squeeze-fake-essential'] 1m4.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 1m4.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 1m4.7s INFO: Running scripts pre_test 1m4.7s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_test_root_password'] 1m4.7s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 1m4.7s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_test_root_password'] 1m4.7s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-cache', 'show', 'python-biopython-martel'] 1m4.8s DUMP: Package: python-biopython-martel Priority: optional Section: python Installed-Size: 281 Maintainer: Debian-Med Packaging Team Architecture: all Source: python-biopython Version: 1.45-3 Replaces: python2.3-biopython-martel (<< 1.42-1), python2.4-biopython-martel (<< 1.42-1) Provides: python2.4-biopython-martel, python2.5-biopython-martel Depends: python (>= 2.3), python-support (>= 0.7.1), python-biopython Conflicts: python2.3-biopython-martel (<< 1.42-1), python2.4-biopython-martel (<< 1.42-1) Filename: pool/main/p/python-biopython/python-biopython-martel_1.45-3_all.deb Size: 59214 MD5sum: 877cb70b0387c44b49585e4ec044c439 SHA1: b97d62480bbebc941062c89c3994da7186669347 SHA256: fe01499f2a8c31f79128a1c6a2ba022d2b6af337af901a5498715225412b35d7 Description: Flat file parser for the Biopython library Martel uses regular expression format definition to generate a parser for flat- and semi-structured files. The parse tree information is passed back to the caller using XML SAX events. In other words, Martel lets you parse flat files as if they are in XML. Homepage: http://biopython.org Python-Version: 2.4, 2.5 Tag: devel::lang:python, devel::library, field::biology, field::biology:bioinformatics, implemented-in::python, role::devel-lib, role::shared-lib, works-with::text 1m4.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-cache', 'show', 'python-biopython-martel'] 1m4.8s INFO: apt-cache knows about the following packages: python-biopython-martel 1m4.8s INFO: Running scripts pre_install 1m4.8s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_install_exceptions'] 1m5.2s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_install_exceptions'] 1m5.2s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m5.2s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m5.2s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-cache', 'policy'] 1m5.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://archive.debian.org lenny/non-free Packages release v=5.0.10,o=Debian,a=oldstable,l=Debian,c=non-free origin archive.debian.org 500 http://archive.debian.org lenny/contrib Packages release v=5.0.10,o=Debian,a=oldstable,l=Debian,c=contrib origin archive.debian.org 500 http://archive.debian.org lenny/main Packages release v=5.0.10,o=Debian,a=oldstable,l=Debian,c=main origin archive.debian.org Pinned packages: 1m5.2s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-cache', 'policy'] 1m5.2s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-cache', 'policy', 'python-biopython-martel'] 1m5.2s DUMP: python-biopython-martel: Installed: (none) Candidate: 1.45-3 Version table: 1.45-3 0 500 http://archive.debian.org lenny/main Packages 1m5.2s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-cache', 'policy', 'python-biopython-martel'] 1m5.2s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', '-y', 'install', 'python-biopython-martel'] 1m19.4s DUMP: Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: libdb4.5 libncursesw5 libsqlite3-0 libssl0.9.8 mime-support python python-biopython python-central python-egenix-mxtexttools python-egenix-mxtools python-minimal python-numeric python-reportlab python-support python2.5 python2.5-minimal Suggested packages: python-doc python-tk python-profiler wise python-egenix-mxtexttools-dbg python-egenix-mxtools-dbg python-numeric-tutorial python-numeric-dbg pdf-viewer python-reportlab-doc python2.5-doc binfmt-support Recommended packages: libgpm2 file python-biopython-doc python-numeric-ext python-renderpm python-imaging ttf-dustin ttf-bitstream-vera The following NEW packages will be installed: libdb4.5 libncursesw5 libsqlite3-0 libssl0.9.8 mime-support python python-biopython python-biopython-martel python-central python-egenix-mxtexttools python-egenix-mxtools python-minimal python-numeric python-reportlab python-support python2.5 python2.5-minimal 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. Need to get 9752kB of archives. After this operation, 33.5MB of additional disk space will be used. Get:1 http://archive.debian.org lenny/main libncursesw5 5.7+20081213-1 [375kB] Get:2 http://archive.debian.org lenny/main libssl0.9.8 0.9.8g-15+lenny16 [981kB] Get:3 http://archive.debian.org lenny/main libdb4.5 4.5.20-13 [555kB] Get:4 http://archive.debian.org lenny/main libsqlite3-0 3.5.9-6 [253kB] Get:5 http://archive.debian.org lenny/main mime-support 3.44-1 [33.3kB] Get:6 http://archive.debian.org lenny/main python2.5-minimal 2.5.2-15+lenny1 [1287kB] Get:7 http://archive.debian.org lenny/main python2.5 2.5.2-15+lenny1 [3039kB] Get:8 http://archive.debian.org lenny/main python-minimal 2.5.2-3 [13.5kB] Get:9 http://archive.debian.org lenny/main python 2.5.2-3 [139kB] Get:10 http://archive.debian.org lenny/main python-central 0.6.8 [40.4kB] Get:11 http://archive.debian.org lenny/main python-support 0.8.4lenny2 [28.6kB] Get:12 http://archive.debian.org lenny/main python-numeric 24.2-9 [213kB] Get:13 http://archive.debian.org lenny/main python-biopython-martel 1.45-3 [59.2kB] Get:14 http://archive.debian.org lenny/main python-reportlab 2.1dfsg-2 [643kB] Get:15 http://archive.debian.org lenny/main python-egenix-mxtools 3.1.0-1 [514kB] Get:16 http://archive.debian.org lenny/main python-egenix-mxtexttools 3.1.0-1 [606kB] Get:17 http://archive.debian.org lenny/main python-biopython 1.45-3 [972kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9752kB in 1s (6198kB/s) Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package libncursesw5. (Reading database ... 6013 files and directories currently installed.) Unpacking libncursesw5 (from .../libncursesw5_5.7+20081213-1_amd64.deb) ... Selecting previously deselected package libssl0.9.8. Unpacking libssl0.9.8 (from .../libssl0.9.8_0.9.8g-15+lenny16_amd64.deb) ... Selecting previously deselected package libdb4.5. Unpacking libdb4.5 (from .../libdb4.5_4.5.20-13_amd64.deb) ... Selecting previously deselected package libsqlite3-0. Unpacking libsqlite3-0 (from .../libsqlite3-0_3.5.9-6_amd64.deb) ... Selecting previously deselected package mime-support. Unpacking mime-support (from .../mime-support_3.44-1_all.deb) ... Selecting previously deselected package python2.5-minimal. Unpacking python2.5-minimal (from .../python2.5-minimal_2.5.2-15+lenny1_amd64.deb) ... Selecting previously deselected package python2.5. Unpacking python2.5 (from .../python2.5_2.5.2-15+lenny1_amd64.deb) ... Selecting previously deselected package python-minimal. Unpacking python-minimal (from .../python-minimal_2.5.2-3_all.deb) ... Selecting previously deselected package python. Unpacking python (from .../python_2.5.2-3_all.deb) ... Selecting previously deselected package python-central. Unpacking python-central (from .../python-central_0.6.8_all.deb) ... Selecting previously deselected package python-support. Unpacking python-support (from .../python-support_0.8.4lenny2_all.deb) ... Selecting previously deselected package python-numeric. Unpacking python-numeric (from .../python-numeric_24.2-9_amd64.deb) ... Selecting previously deselected package python-biopython-martel. Unpacking python-biopython-martel (from .../python-biopython-martel_1.45-3_all.deb) ... Selecting previously deselected package python-reportlab. Unpacking python-reportlab (from .../python-reportlab_2.1dfsg-2_all.deb) ... Selecting previously deselected package python-egenix-mxtools. Unpacking python-egenix-mxtools (from .../python-egenix-mxtools_3.1.0-1_amd64.deb) ... Selecting previously deselected package python-egenix-mxtexttools. Unpacking python-egenix-mxtexttools (from .../python-egenix-mxtexttools_3.1.0-1_amd64.deb) ... Selecting previously deselected package python-biopython. Unpacking python-biopython (from .../python-biopython_1.45-3_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libncursesw5 (5.7+20081213-1) ... Setting up libssl0.9.8 (0.9.8g-15+lenny16) ... Setting up libdb4.5 (4.5.20-13) ... Setting up libsqlite3-0 (3.5.9-6) ... Setting up mime-support (3.44-1) ... Setting up python2.5-minimal (2.5.2-15+lenny1) ... Setting up python2.5 (2.5.2-15+lenny1) ... Setting up python-minimal (2.5.2-3) ... Setting up python (2.5.2-3) ... Setting up python-central (0.6.8) ... Setting up python-support (0.8.4lenny2) ... Setting up python-numeric (24.2-9) ... Setting up python-reportlab (2.1dfsg-2) ... Setting up python-egenix-mxtools (3.1.0-1) ... Setting up python-egenix-mxtexttools (3.1.0-1) ... Setting up python-biopython-martel (1.45-3) ... Setting up python-biopython (1.45-3) ... Processing triggers for python-support ... 1m19.4s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', '-y', 'install', 'python-biopython-martel'] 1m19.4s INFO: Running scripts post_install 1m19.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 1m20.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 1m20.1s DEBUG: Upgrading /org/piuparts.debian.org/tmp/tmpxYqlAQ to squeeze 1m20.1s DEBUG: sources.list: deb http://piatti.debian.org/debian/ squeeze main deb http://piatti.debian.org/debian/ squeeze contrib deb http://piatti.debian.org/debian/ squeeze non-free 1m20.1s INFO: Running scripts pre_distupgrade 1m20.1s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_distupgrade_exceptions'] 1m20.1s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_distupgrade_exceptions'] 1m20.1s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 1m20.1s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 1m20.1s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', 'update'] 1m22.8s DUMP: Get:1 http://piatti.debian.org squeeze Release.gpg [1672B] Get:2 http://piatti.debian.org squeeze Release [99.8kB] Get:3 http://piatti.debian.org squeeze/main Packages [8602kB] Get:4 http://piatti.debian.org squeeze/contrib Packages [64.1kB] Get:5 http://piatti.debian.org squeeze/non-free Packages [124kB] Fetched 8892kB in 1s (6245kB/s) Reading package lists... 1m22.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', 'update'] 1m22.8s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', '-yf', 'dist-upgrade'] 2m46.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: python-numeric The following NEW packages will be installed: dash diffutils dmsetup gcc-4.4-base insserv libblas3gf libc-bin libdb4.8 libexpat1 libgfortran3 liblapack3gf liblzma2 libreadline6 libudev0 python-numpy python2.6 python2.6-minimal sensible-utils xz-utils The following packages will be upgraded: adduser apt base-files base-passwd bash bsdutils coreutils debconf debconf-i18n debian-archive-keyring debianutils diff dpkg e2fslibs e2fsprogs findutils gcc-4.3-base gnupg gpgv grep gzip hostname initscripts libacl1 libattr1 libblkid1 libbz2-1.0 libc6 libcomerr2 libdb4.6 libdevmapper1.02.1 libgcc1 liblocale-gettext-perl libncurses5 libncursesw5 libpam-modules libpam-runtime libpam0g libreadline5 libselinux1 libsepol1 libslang2 libsqlite3-0 libss2 libssl0.9.8 libstdc++6 libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libusb-0.1-4 libuuid1 login lsb-base makedev mawk mime-support mktemp mount ncurses-base ncurses-bin passwd perl-base procps python python-biopython python-central python-egenix-mxtexttools python-egenix-mxtools python-minimal python-reportlab python-support python2.5 python2.5-minimal readline-common sed sysv-rc sysvinit sysvinit-utils tar tzdata ucf util-linux zlib1g 83 upgraded, 19 newly installed, 1 to remove and 0 not upgraded. Need to get 53.9MB of archives. After this operation, 47.7MB of additional disk space will be used. Get:1 http://piatti.debian.org squeeze/main libc-bin 2.11.3-4 [749kB] Get:2 http://piatti.debian.org squeeze/main libc6 2.11.3-4 [4282kB] Get:3 http://piatti.debian.org squeeze/main gcc-4.4-base 4.4.5-8 [123kB] Get:4 http://piatti.debian.org squeeze/main libgcc1 1:4.4.5-8 [45.0kB] Get:5 http://piatti.debian.org squeeze/main python-central 0.6.16+nmu1 [47.4kB] Get:6 http://piatti.debian.org squeeze/main python-egenix-mxtools 3.1.3-4 [97.8kB] Get:7 http://piatti.debian.org squeeze/main python-egenix-mxtexttools 3.1.3-4 [94.6kB] Get:8 http://piatti.debian.org squeeze/main zlib1g 1:1.2.3.4.dfsg-3 [79.2kB] Get:9 http://piatti.debian.org squeeze/main perl-base 5.10.1-17squeeze5 [1059kB] Get:10 http://piatti.debian.org squeeze/main liblocale-gettext-perl 1.05-6 [21.6kB] Get:11 http://piatti.debian.org squeeze/main libtext-iconv-perl 1.7-2 [18.5kB] Get:12 http://piatti.debian.org squeeze/main libtext-charwidth-perl 0.04-6 [11.9kB] Get:13 http://piatti.debian.org squeeze/main libtext-wrapi18n-perl 0.06-7 [9004B] Get:14 http://piatti.debian.org squeeze/main debconf-i18n 1.5.36.1 [210kB] Get:15 http://piatti.debian.org squeeze/main debconf 1.5.36.1 [162kB] Get:16 http://piatti.debian.org squeeze/main libssl0.9.8 0.9.8o-4squeeze14 [1002kB] Get:17 http://piatti.debian.org squeeze/main python2.6-minimal 2.6.6-8+b1 [1520kB] Get:18 http://piatti.debian.org squeeze/main mime-support 3.48-1 [34.2kB] Get:19 http://piatti.debian.org squeeze/main libbz2-1.0 1.0.5-6+squeeze1 [46.3kB] Get:20 http://piatti.debian.org squeeze/main libdb4.8 4.8.30-2 [696kB] Get:21 http://piatti.debian.org squeeze/main libexpat1 2.0.1-7+squeeze1 [138kB] Get:22 http://piatti.debian.org squeeze/main libncursesw5 5.7+20100313-5 [390kB] Get:23 http://piatti.debian.org squeeze/main libncurses5 5.7+20100313-5 [365kB] Get:24 http://piatti.debian.org squeeze/main liblzma2 5.0.0-2 [184kB] Get:25 http://piatti.debian.org squeeze/main xz-utils 5.0.0-2 [201kB] Get:26 http://piatti.debian.org squeeze/main dpkg 1.15.8.13 [2399kB] Get:27 http://piatti.debian.org squeeze/main readline-common 6.1-3 [54.0kB] Get:28 http://piatti.debian.org squeeze/main libreadline6 6.1-3 [161kB] Get:29 http://piatti.debian.org squeeze/main libsqlite3-0 3.7.3-1 [397kB] Get:30 http://piatti.debian.org squeeze/main python2.6 2.6.6-8+b1 [2455kB] Get:31 http://piatti.debian.org squeeze/main python2.5 2.5.5-11 [3053kB] Get:32 http://piatti.debian.org squeeze/main python2.5-minimal 2.5.5-11 [1307kB] Get:33 http://piatti.debian.org squeeze/main python-biopython 1.54-1 [1310kB] Get:34 http://piatti.debian.org squeeze/main python 2.6.6-3+squeeze7 [169kB] Get:35 http://piatti.debian.org squeeze/main python-minimal 2.6.6-3+squeeze7 [33.8kB] Get:36 http://piatti.debian.org squeeze/main python-support 1.0.10 [33.0kB] Get:37 http://piatti.debian.org squeeze/main libgfortran3 4.4.5-8 [291kB] Get:38 http://piatti.debian.org squeeze/main libblas3gf 1.2-8 [229kB] Get:39 http://piatti.debian.org squeeze/main liblapack3gf 3.2.1-8 [4434kB] Get:40 http://piatti.debian.org squeeze/main python-numpy 1:1.4.1-5 [2080kB] Get:41 http://piatti.debian.org squeeze/main python-reportlab 2.4-4 [546kB] Get:42 http://piatti.debian.org squeeze/main base-files 6.0squeeze7 [68.8kB] Get:43 http://piatti.debian.org squeeze/main sensible-utils 0.0.4 [5408B] Get:44 http://piatti.debian.org squeeze/main debianutils 3.4 [49.9kB] Get:45 http://piatti.debian.org squeeze/main dash 0.5.5.1-7.4 [108kB] Get:46 http://piatti.debian.org squeeze/main bash 4.1-3 [1325kB] Get:47 http://piatti.debian.org squeeze/main coreutils 8.5-1 [5102kB] Get:48 http://piatti.debian.org squeeze/main diffutils 1:3.0-1 [361kB] Get:49 http://piatti.debian.org squeeze/main e2fslibs 1.41.12-4stable1 [145kB] Get:50 http://piatti.debian.org squeeze/main libpam0g 1.1.1-6.1+squeeze1 [118kB] Get:51 http://piatti.debian.org squeeze/main libselinux1 2.0.96-1 [88.3kB] Get:52 http://piatti.debian.org squeeze/main libpam-modules 1.1.1-6.1+squeeze1 [364kB] Get:53 http://piatti.debian.org squeeze/main passwd 1:4.1.4.2+svn3283-2+squeeze1 [1113kB] Get:54 http://piatti.debian.org squeeze/main libuuid1 2.17.2-9 [59.3kB] Get:55 http://piatti.debian.org squeeze/main libblkid1 2.17.2-9 [109kB] Get:56 http://piatti.debian.org squeeze/main sed 4.2.1-7 [251kB] Get:57 http://piatti.debian.org squeeze/main ncurses-bin 5.7+20100313-5 [320kB] Get:58 http://piatti.debian.org squeeze/main lsb-base 3.2-23.2squeeze1 [20.5kB] Get:59 http://piatti.debian.org squeeze/main tzdata 2012g-0squeeze1 [642kB] Get:60 http://piatti.debian.org squeeze/main sysvinit-utils 2.88dsf-13.1+squeeze1 [122kB] Get:61 http://piatti.debian.org squeeze/main mount 2.17.2-9 [178kB] Get:62 http://piatti.debian.org squeeze/main initscripts 2.88dsf-13.1+squeeze1 [70.6kB] Get:63 http://piatti.debian.org squeeze/main insserv 1.14.0-2 [71.0kB] Get:64 http://piatti.debian.org squeeze/main sysv-rc 2.88dsf-13.1+squeeze1 [73.9kB] Get:65 http://piatti.debian.org squeeze/main util-linux 2.17.2-9 [739kB] Get:66 http://piatti.debian.org squeeze/main e2fsprogs 1.41.12-4stable1 [818kB] Get:67 http://piatti.debian.org squeeze/main findutils 4.4.2-1+b1 [689kB] Get:68 http://piatti.debian.org squeeze/main grep 2.6.3-3 [308kB] Get:69 http://piatti.debian.org squeeze/main gzip 1.3.12-9+squeeze1 [108kB] Get:70 http://piatti.debian.org squeeze/main hostname 3.04 [15.7kB] Get:71 http://piatti.debian.org squeeze/main login 1:4.1.4.2+svn3283-2+squeeze1 [783kB] Get:72 http://piatti.debian.org squeeze/main libsepol1 2.0.41-1 [132kB] Get:73 http://piatti.debian.org squeeze/main sysvinit 2.88dsf-13.1+squeeze1 [121kB] Get:74 http://piatti.debian.org squeeze/main tar 1.23-3 [931kB] Get:75 http://piatti.debian.org squeeze/main diff 1:3.0-1 [6490B] Get:76 http://piatti.debian.org squeeze/main mktemp 8.5-1 [14.8kB] Get:77 http://piatti.debian.org squeeze/main base-passwd 3.5.22 [41.9kB] Get:78 http://piatti.debian.org squeeze/main bsdutils 1:2.17.2-9 [80.3kB] Get:79 http://piatti.debian.org squeeze/main ncurses-base 5.7+20100313-5 [188kB] Get:80 http://piatti.debian.org squeeze/main mawk 1.3.3-15 [90.1kB] Get:81 http://piatti.debian.org squeeze/main libstdc++6 4.4.5-8 [341kB] Get:82 http://piatti.debian.org squeeze/main libusb-0.1-4 2:0.1.12-16 [21.9kB] Get:83 http://piatti.debian.org squeeze/main gpgv 1.4.10-4+squeeze1 [222kB] Get:84 http://piatti.debian.org squeeze/main gnupg 1.4.10-4+squeeze1 [2148kB] Get:85 http://piatti.debian.org squeeze/main debian-archive-keyring 2010.08.28+squeeze1 [26.2kB] Get:86 http://piatti.debian.org squeeze/main apt 0.8.10.3+squeeze1 [2174kB] Get:87 http://piatti.debian.org squeeze/main libslang2 2.2.2-4 [546kB] Get:88 http://piatti.debian.org squeeze/main libattr1 1:2.4.44-2 [12.8kB] Get:89 http://piatti.debian.org squeeze/main libacl1 2.2.49-4 [28.3kB] Get:90 http://piatti.debian.org squeeze/main libcomerr2 1.41.12-4stable1 [49.8kB] Get:91 http://piatti.debian.org squeeze/main libpam-runtime 1.1.1-6.1+squeeze1 [225kB] Get:92 http://piatti.debian.org squeeze/main libss2 1.41.12-4stable1 [55.0kB] Get:93 http://piatti.debian.org squeeze/main gcc-4.3-base 4.3.5-4 [110kB] Get:94 http://piatti.debian.org squeeze/main adduser 3.112+nmu2 [250kB] Get:95 http://piatti.debian.org squeeze/main libudev0 164-3 [115kB] Get:96 http://piatti.debian.org squeeze/main procps 1:3.2.8-9squeeze1 [249kB] Get:97 http://piatti.debian.org squeeze/main libdb4.6 4.6.21-16 [600kB] Get:98 http://piatti.debian.org squeeze/main ucf 3.0025+nmu1 [69.6kB] Get:99 http://piatti.debian.org squeeze/main libdevmapper1.02.1 2:1.02.48-5 [85.4kB] Get:100 http://piatti.debian.org squeeze/main dmsetup 2:1.02.48-5 [56.7kB] Get:101 http://piatti.debian.org squeeze/main libreadline5 5.2-7 [146kB] Get:102 http://piatti.debian.org squeeze/main makedev 2.3.1-89 [42.4kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 53.9MB in 2s (25.9MB/s) Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package libc-bin. dpkg: considering deconfiguration of libc6, which would be broken by installation of libc-bin ... dpkg: yes, will deconfigure libc6 (broken by libc-bin). (Reading database ... 7747 files and directories currently installed.) Unpacking libc-bin (from .../libc-bin_2.11.3-4_amd64.deb) ... De-configuring libc6 ... Replacing files in old package libc6 ... Preparing to replace libc6 2.7-18lenny7 (using .../libc6_2.11.3-4_amd64.deb) ... Removing obsolete conffile /etc/init.d/glibc.sh ... Checking for services that may need to be restarted... Checking init scripts... Unpacking replacement libc6 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libc-bin (2.11.3-4) ... Installing new version of config file /etc/gai.conf ... Installing new version of config file /etc/bindresvport.blacklist ... Setting up libc6 (2.11.3-4) ... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package gcc-4.4-base. (Reading database ... 7748 files and directories currently installed.) Unpacking gcc-4.4-base (from .../gcc-4.4-base_4.4.5-8_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gcc-4.4-base (4.4.5-8) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7756 files and directories currently installed.) Preparing to replace libgcc1 1:4.3.2-1.1 (using .../libgcc1_1%3a4.4.5-8_amd64.deb) ... Unpacking replacement libgcc1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libgcc1 (1:4.4.5-8) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7756 files and directories currently installed.) Preparing to replace python-central 0.6.8 (using .../python-central_0.6.16+nmu1_all.deb) ... Unpacking replacement python-central ... Preparing to replace python-egenix-mxtools 3.1.0-1 (using .../python-egenix-mxtools_3.1.3-4_amd64.deb) ... Unpacking replacement python-egenix-mxtools ... Preparing to replace python-egenix-mxtexttools 3.1.0-1 (using .../python-egenix-mxtexttools_3.1.3-4_amd64.deb) ... Unpacking replacement python-egenix-mxtexttools ... Preparing to replace zlib1g 1:1.2.3.3.dfsg-12 (using .../zlib1g_1%3a1.2.3.4.dfsg-3_amd64.deb) ... Unpacking replacement zlib1g ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up zlib1g (1:1.2.3.4.dfsg-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7748 files and directories currently installed.) Preparing to replace perl-base 5.10.0-19lenny5 (using .../perl-base_5.10.1-17squeeze5_amd64.deb) ... Unpacking replacement perl-base ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up perl-base (5.10.1-17squeeze5) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7796 files and directories currently installed.) Preparing to replace liblocale-gettext-perl 1.05-4 (using .../liblocale-gettext-perl_1.05-6_amd64.deb) ... Unpacking replacement liblocale-gettext-perl ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up liblocale-gettext-perl (1.05-6) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7796 files and directories currently installed.) Preparing to replace libtext-iconv-perl 1.7-1+b1 (using .../libtext-iconv-perl_1.7-2_amd64.deb) ... Unpacking replacement libtext-iconv-perl ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libtext-iconv-perl (1.7-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7797 files and directories currently installed.) Preparing to replace libtext-charwidth-perl 0.04-5+b1 (using .../libtext-charwidth-perl_0.04-6_amd64.deb) ... Unpacking replacement libtext-charwidth-perl ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libtext-charwidth-perl (0.04-6) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7797 files and directories currently installed.) Preparing to replace libtext-wrapi18n-perl 0.06-6 (using .../libtext-wrapi18n-perl_0.06-7_all.deb) ... Unpacking replacement libtext-wrapi18n-perl ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libtext-wrapi18n-perl (0.06-7) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7797 files and directories currently installed.) Preparing to replace debconf-i18n 1.5.24 (using .../debconf-i18n_1.5.36.1_all.deb) ... Unpacking replacement debconf-i18n ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up debconf-i18n (1.5.36.1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7816 files and directories currently installed.) Preparing to replace debconf 1.5.24 (using .../debconf_1.5.36.1_all.deb) ... Unpacking replacement debconf ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up debconf (1.5.36.1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 7818 files and directories currently installed.) Preparing to replace libssl0.9.8 0.9.8g-15+lenny16 (using .../libssl0.9.8_0.9.8o-4squeeze14_amd64.deb) ... Unpacking replacement libssl0.9.8 ... Selecting previously deselected package python2.6-minimal. Unpacking python2.6-minimal (from .../python2.6-minimal_2.6.6-8+b1_amd64.deb) ... Preparing to replace mime-support 3.44-1 (using .../mime-support_3.48-1_all.deb) ... Unpacking replacement mime-support ... Preparing to replace libbz2-1.0 1.0.5-1+lenny1 (using .../libbz2-1.0_1.0.5-6+squeeze1_amd64.deb) ... Unpacking replacement libbz2-1.0 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libbz2-1.0 (1.0.5-6+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package libdb4.8. (Reading database ... 7984 files and directories currently installed.) Unpacking libdb4.8 (from .../libdb4.8_4.8.30-2_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libdb4.8 (4.8.30-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package libexpat1. (Reading database ... 7988 files and directories currently installed.) Unpacking libexpat1 (from .../libexpat1_2.0.1-7+squeeze1_amd64.deb) ... Preparing to replace libncursesw5 5.7+20081213-1 (using .../libncursesw5_5.7+20100313-5_amd64.deb) ... Unpacking replacement libncursesw5 ... Preparing to replace libncurses5 5.7+20081213-1 (using .../libncurses5_5.7+20100313-5_amd64.deb) ... Unpacking replacement libncurses5 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libncurses5 (5.7+20100313-5) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package liblzma2. (Reading database ... 7996 files and directories currently installed.) Unpacking liblzma2 (from .../liblzma2_5.0.0-2_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up liblzma2 (5.0.0-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package xz-utils. (Reading database ... 8006 files and directories currently installed.) Unpacking xz-utils (from .../xz-utils_5.0.0-2_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up xz-utils (5.0.0-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 8048 files and directories currently installed.) Preparing to replace dpkg 1.14.31 (using .../dpkg_1.15.8.13_amd64.deb) ... Unpacking replacement dpkg ... dpkg: warning - unable to delete old directory `/etc/dpkg/origins': Directory not empty Can not write log, openpty() failed (/dev/pts not mounted?) Setting up dpkg (1.15.8.13) ... Installing new version of config file /etc/logrotate.d/dpkg ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 8051 files and directories currently installed.) Preparing to replace readline-common 5.2-3.1 (using .../readline-common_6.1-3_all.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package readline-common should be updated. Unpacking replacement readline-common ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up readline-common (6.1-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package libreadline6. (Reading database ... 8051 files and directories currently installed.) Unpacking libreadline6 (from .../libreadline6_6.1-3_amd64.deb) ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libreadline6 (6.1-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 8064 files and directories currently installed.) Preparing to replace libsqlite3-0 3.5.9-6 (using .../libsqlite3-0_3.7.3-1_amd64.deb) ... Unpacking replacement libsqlite3-0 ... Selecting previously deselected package python2.6. Unpacking python2.6 (from .../python2.6_2.6.6-8+b1_amd64.deb) ... Preparing to replace python2.5 2.5.2-15+lenny1 (using .../python2.5_2.5.5-11_amd64.deb) ... Unpacking replacement python2.5 ... Preparing to replace python2.5-minimal 2.5.2-15+lenny1 (using .../python2.5-minimal_2.5.5-11_amd64.deb) ... Unpacking replacement python2.5-minimal ... Preparing to replace python-biopython 1.45-3 (using .../python-biopython_1.54-1_amd64.deb) ... Unpacking replacement python-biopython ... Processing triggers for python-support ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 8597 files and directories currently installed.) Removing python-numeric ... INFO: using unknown version '/usr/bin/python2.6' (debian_defaults not up-to-date?) Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 8564 files and directories currently installed.) Preparing to replace python 2.5.2-3 (using .../python_2.6.6-3+squeeze7_all.deb) ... Unpacking replacement python ... Preparing to replace python-minimal 2.5.2-3 (using .../python-minimal_2.6.6-3+squeeze7_all.deb) ... Unpacking replacement python-minimal ... Preparing to replace python-support 0.8.4lenny2 (using .../python-support_1.0.10_all.deb) ... Unpacking replacement python-support ... Selecting previously deselected package libgfortran3. Unpacking libgfortran3 (from .../libgfortran3_4.4.5-8_amd64.deb) ... Selecting previously deselected package libblas3gf. Unpacking libblas3gf (from .../libblas3gf_1.2-8_amd64.deb) ... Selecting previously deselected package liblapack3gf. Unpacking liblapack3gf (from .../liblapack3gf_3.2.1-8_amd64.deb) ... Selecting previously deselected package python-numpy. Unpacking python-numpy (from .../python-numpy_1%3a1.4.1-5_amd64.deb) ... Preparing to replace python-reportlab 2.1dfsg-2 (using .../python-reportlab_2.4-4_all.deb) ... Unpacking replacement python-reportlab ... Preparing to replace base-files 5lenny11 (using .../base-files_6.0squeeze7_amd64.deb) ... Unpacking replacement base-files ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up base-files (6.0squeeze7) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package sensible-utils. (Reading database ... 9319 files and directories currently installed.) Unpacking sensible-utils (from .../sensible-utils_0.0.4_all.deb) ... Replacing files in old package debianutils ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sensible-utils (0.0.4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9326 files and directories currently installed.) Preparing to replace debianutils 2.30 (using .../debianutils_3.4_amd64.deb) ... Unpacking replacement debianutils ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up debianutils (3.4) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package dash. (Reading database ... 9322 files and directories currently installed.) Unpacking dash (from .../dash_0.5.5.1-7.4_amd64.deb) ... Adding 'diversion of /bin/sh to /bin/sh.distrib by dash' Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' Can not write log, openpty() failed (/dev/pts not mounted?) Setting up dash (0.5.5.1-7.4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9334 files and directories currently installed.) Preparing to replace bash 3.2-4 (using .../archives/bash_4.1-3_amd64.deb) ... Unpacking replacement bash ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up bash (4.1-3) ... Installing new version of config file /etc/bash.bashrc ... Installing new version of config file /etc/skel/.bashrc ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode. Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9357 files and directories currently installed.) Preparing to replace coreutils 6.10-6 (using .../coreutils_8.5-1_amd64.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package coreutils should be updated. Unpacking replacement coreutils ... Replacing files in old package mktemp ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up coreutils (8.5-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package diffutils. (Reading database ... 9383 files and directories currently installed.) Unpacking diffutils (from .../diffutils_1%3a3.0-1_amd64.deb) ... Replacing files in old package diff ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up diffutils (1:3.0-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9405 files and directories currently installed.) Preparing to replace e2fslibs 1.41.3-1 (using .../e2fslibs_1.41.12-4stable1_amd64.deb) ... Unpacking replacement e2fslibs ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up e2fslibs (1.41.12-4stable1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9405 files and directories currently installed.) Preparing to replace libpam0g 1.0.1-5+lenny1 (using .../libpam0g_1.1.1-6.1+squeeze1_amd64.deb) ... Unpacking replacement libpam0g ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libpam0g (1.1.1-6.1+squeeze1) ... Checking for services that may need to be restarted...Checking init scripts... Nothing to restart. Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9405 files and directories currently installed.) Preparing to replace libselinux1 2.0.65-5 (using .../libselinux1_2.0.96-1_amd64.deb) ... Unpacking replacement libselinux1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libselinux1 (2.0.96-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9405 files and directories currently installed.) Preparing to replace libpam-modules 1.0.1-5+lenny1 (using .../libpam-modules_1.1.1-6.1+squeeze1_amd64.deb) ... Unpacking replacement libpam-modules ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libpam-modules (1.1.1-6.1+squeeze1) ... Installing new version of config file /etc/security/namespace.init ... Installing new version of config file /etc/security/limits.conf ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9411 files and directories currently installed.) Preparing to replace passwd 1:4.1.1-6+lenny1 (using .../passwd_1%3a4.1.4.2+svn3283-2+squeeze1_amd64.deb) ... Unpacking replacement passwd ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up passwd (1:4.1.4.2+svn3283-2+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9408 files and directories currently installed.) Preparing to replace libuuid1 1.41.3-1 (using .../libuuid1_2.17.2-9_amd64.deb) ... Unpacking replacement libuuid1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libuuid1 (2.17.2-9) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9408 files and directories currently installed.) Preparing to replace libblkid1 1.41.3-1 (using .../libblkid1_2.17.2-9_amd64.deb) ... Unpacking replacement libblkid1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libblkid1 (2.17.2-9) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9409 files and directories currently installed.) Preparing to replace sed 4.1.5-6 (using .../archives/sed_4.2.1-7_amd64.deb) ... Unpacking replacement sed ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sed (4.2.1-7) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9412 files and directories currently installed.) Preparing to replace ncurses-bin 5.7+20081213-1 (using .../ncurses-bin_5.7+20100313-5_amd64.deb) ... Unpacking replacement ncurses-bin ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up ncurses-bin (5.7+20100313-5) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9414 files and directories currently installed.) Preparing to replace lsb-base 3.2-20 (using .../lsb-base_3.2-23.2squeeze1_all.deb) ... Unpacking replacement lsb-base ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up lsb-base (3.2-23.2squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9414 files and directories currently installed.) Preparing to replace tzdata 2011k-0lenny1 (using .../tzdata_2012g-0squeeze1_all.deb) ... Unpacking replacement tzdata ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up tzdata (2012g-0squeeze1) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Mar 26 00:24:16 UTC 2013. Universal Time is now: Tue Mar 26 00:24:16 UTC 2013. Run 'dpkg-reconfigure tzdata' if you wish to change it. Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9420 files and directories currently installed.) Preparing to replace sysvinit-utils 2.86.ds1-61 (using .../sysvinit-utils_2.88dsf-13.1+squeeze1_amd64.deb) ... Unpacking replacement sysvinit-utils ... Replacing files in old package sysvinit ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sysvinit-utils (2.88dsf-13.1+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9424 files and directories currently installed.) Preparing to replace mount 2.13.1.1-1 (using .../mount_2.17.2-9_amd64.deb) ... Unpacking replacement mount ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up mount (2.17.2-9) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9425 files and directories currently installed.) Preparing to replace initscripts 2.86.ds1-61 (using .../initscripts_2.88dsf-13.1+squeeze1_amd64.deb) ... Unpacking replacement initscripts ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up initscripts (2.88dsf-13.1+squeeze1) ... Installing new version of config file /etc/init.d/bootlogd ... Installing new version of config file /etc/init.d/stop-bootlogd ... Installing new version of config file /etc/init.d/stop-bootlogd-single ... Installing new version of config file /etc/init.d/bootmisc.sh ... Installing new version of config file /etc/init.d/checkfs.sh ... Installing new version of config file /etc/init.d/checkroot.sh ... Installing new version of config file /etc/init.d/hostname.sh ... Installing new version of config file /etc/init.d/killprocs ... Installing new version of config file /etc/init.d/mountall.sh ... Installing new version of config file /etc/init.d/mountnfs-bootclean.sh ... Installing new version of config file /etc/init.d/mountoverflowtmp ... Installing new version of config file /etc/init.d/mountdevsubfs.sh ... Installing new version of config file /etc/init.d/mountkernfs.sh ... Installing new version of config file /etc/init.d/mtab.sh ... Installing new version of config file /etc/init.d/rc.local ... Installing new version of config file /etc/init.d/rmnologin ... Installing new version of config file /etc/init.d/sendsigs ... Installing new version of config file /etc/init.d/umountfs ... Installing new version of config file /etc/init.d/umountnfs.sh ... Installing new version of config file /etc/init.d/urandom ... Installing new version of config file /etc/network/if-up.d/mountnfs ... Can not write log, openpty() failed (/dev/pts not mounted?) Selecting previously deselected package insserv. dpkg: considering deconfiguration of sysv-rc, which would be broken by installation of insserv ... dpkg: yes, will deconfigure sysv-rc (broken by insserv). (Reading database ... 9428 files and directories currently installed.) Unpacking insserv (from .../insserv_1.14.0-2_amd64.deb) ... De-configuring sysv-rc ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up insserv (1.14.0-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9457 files and directories currently installed.) Preparing to replace sysv-rc 2.86.ds1-61 (using .../sysv-rc_2.88dsf-13.1+squeeze1_all.deb) ... Unpacking replacement sysv-rc ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sysv-rc (2.88dsf-13.1+squeeze1) ... info: Checking if it is safe to convert to dependency based boot. info: Reordering boot system, log to /var/lib/insserv/run-20130326T0024.log success: Enabled dependency based boot system. Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9458 files and directories currently installed.) Preparing to replace util-linux 2.13.1.1-1 (using .../util-linux_2.17.2-9_amd64.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package util-linux should be updated. Unpacking replacement util-linux ... Replacing files in old package e2fsprogs ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up util-linux (2.17.2-9) ... Installing new version of config file /etc/init.d/hwclockfirst.sh ... Installing new version of config file /etc/init.d/hwclock.sh ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9476 files and directories currently installed.) Preparing to replace e2fsprogs 1.41.3-1 (using .../e2fsprogs_1.41.12-4stable1_amd64.deb) ... Unpacking replacement e2fsprogs ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up e2fsprogs (1.41.12-4stable1) ... Installing new version of config file /etc/mke2fs.conf ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9479 files and directories currently installed.) Preparing to replace findutils 4.4.0-2 (using .../findutils_4.4.2-1+b1_amd64.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package findutils should be updated. Unpacking replacement findutils ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up findutils (4.4.2-1+b1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9481 files and directories currently installed.) Preparing to replace grep 2.5.3~dfsg-6 (using .../grep_2.6.3-3_amd64.deb) ... Unpacking replacement grep ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up grep (2.6.3-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9483 files and directories currently installed.) Preparing to replace gzip 1.3.12-6+lenny1 (using .../gzip_1.3.12-9+squeeze1_amd64.deb) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package gzip should be updated. Unpacking replacement gzip ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gzip (1.3.12-9+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9483 files and directories currently installed.) Preparing to replace hostname 2.95 (using .../hostname_3.04_amd64.deb) ... Unpacking replacement hostname ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up hostname (3.04) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9489 files and directories currently installed.) Preparing to replace login 1:4.1.1-6+lenny1 (using .../login_1%3a4.1.4.2+svn3283-2+squeeze1_amd64.deb) ... Unpacking replacement login ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up login (1:4.1.4.2+svn3283-2+squeeze1) ... Installing new version of config file /etc/securetty ... Installing new version of config file /etc/pam.d/login ... Installing new version of config file /etc/login.defs ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9486 files and directories currently installed.) Preparing to replace libsepol1 2.0.30-2 (using .../libsepol1_2.0.41-1_amd64.deb) ... Unpacking replacement libsepol1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libsepol1 (2.0.41-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9486 files and directories currently installed.) Preparing to replace sysvinit 2.86.ds1-61 (using .../sysvinit_2.88dsf-13.1+squeeze1_amd64.deb) ... Unpacking replacement sysvinit ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up sysvinit (2.88dsf-13.1+squeeze1) ... init: timeout opening/writing control channel /dev/initctl Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9487 files and directories currently installed.) Preparing to replace tar 1.20-1+lenny1 (using .../archives/tar_1.23-3_amd64.deb) ... Unpacking replacement tar ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up tar (1.23-3) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9487 files and directories currently installed.) Preparing to replace diff 2.8.1-12 (using .../diff_1%3a3.0-1_all.deb) ... Unpacking replacement diff ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up diff (1:3.0-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9484 files and directories currently installed.) Preparing to replace mktemp 1.5-9 (using .../archives/mktemp_8.5-1_all.deb) ... Unpacking replacement mktemp ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up mktemp (8.5-1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9484 files and directories currently installed.) Preparing to replace base-passwd 3.5.20 (using .../base-passwd_3.5.22_amd64.deb) ... Unpacking replacement base-passwd ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up base-passwd (3.5.22) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9484 files and directories currently installed.) Preparing to replace bsdutils 1:2.13.1.1-1 (using .../bsdutils_1%3a2.17.2-9_amd64.deb) ... Unpacking replacement bsdutils ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up bsdutils (1:2.17.2-9) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9485 files and directories currently installed.) Preparing to replace ncurses-base 5.7+20081213-1 (using .../ncurses-base_5.7+20100313-5_all.deb) ... Unpacking replacement ncurses-base ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up ncurses-base (5.7+20100313-5) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9436 files and directories currently installed.) Preparing to replace mawk 1.3.3-11.1 (using .../mawk_1.3.3-15_amd64.deb) ... Unpacking replacement mawk ... Preparing to replace libstdc++6 4.3.2-1.1 (using .../libstdc++6_4.4.5-8_amd64.deb) ... Unpacking replacement libstdc++6 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libstdc++6 (4.4.5-8) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9436 files and directories currently installed.) Preparing to replace libusb-0.1-4 2:0.1.12-13 (using .../libusb-0.1-4_2%3a0.1.12-16_amd64.deb) ... Unpacking replacement libusb-0.1-4 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libusb-0.1-4 (2:0.1.12-16) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9436 files and directories currently installed.) Preparing to replace gpgv 1.4.9-3+lenny1 (using .../gpgv_1.4.10-4+squeeze1_amd64.deb) ... Unpacking replacement gpgv ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gpgv (1.4.10-4+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9437 files and directories currently installed.) Preparing to replace gnupg 1.4.9-3+lenny1 (using .../gnupg_1.4.10-4+squeeze1_amd64.deb) ... Unpacking replacement gnupg ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gnupg (1.4.10-4+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9445 files and directories currently installed.) Preparing to replace debian-archive-keyring 2010.08.28~lenny1 (using .../debian-archive-keyring_2010.08.28+squeeze1_all.deb) ... Unpacking replacement debian-archive-keyring ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up debian-archive-keyring (2010.08.28+squeeze1) ... gpg: key F42584E6: "Lenny Stable Release Key " not changed gpg: key 55BE302B: "Debian Archive Automatic Signing Key (5.0/lenny) " not changed gpg: key 6D849617: "Debian-Volatile Archive Automatic Signing Key (5.0/lenny)" not changed gpg: key B98321F9: "Squeeze Stable Release Key " not changed gpg: key 473041FA: "Debian Archive Automatic Signing Key (6.0/squeeze) " not changed gpg: key 46925553: public key "Debian Archive Automatic Signing Key (7.0/wheezy) " imported gpg: key 65FFB764: public key "Wheezy Stable Release Key " imported gpg: Total number processed: 7 gpg: imported: 2 (RSA: 2) gpg: unchanged: 5 gpg: no ultimately trusted keys found Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9445 files and directories currently installed.) Preparing to replace apt 0.7.20.2+lenny2 (using .../apt_0.8.10.3+squeeze1_amd64.deb) ... Unpacking replacement apt ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up apt (0.8.10.3+squeeze1) ... Installing new version of config file /etc/cron.daily/apt ... Installing new version of config file /etc/logrotate.d/apt ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... gpg: key F42584E6: "Lenny Stable Release Key " not changed gpg: key 55BE302B: "Debian Archive Automatic Signing Key (5.0/lenny) " not changed gpg: key 6D849617: "Debian-Volatile Archive Automatic Signing Key (5.0/lenny)" not changed gpg: key B98321F9: "Squeeze Stable Release Key " not changed gpg: key 473041FA: "Debian Archive Automatic Signing Key (6.0/squeeze) " not changed gpg: key 46925553: "Debian Archive Automatic Signing Key (7.0/wheezy) " not changed gpg: key 65FFB764: "Wheezy Stable Release Key " not changed gpg: Total number processed: 7 gpg: unchanged: 7 Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9489 files and directories currently installed.) Preparing to replace libslang2 2.1.3-3 (using .../libslang2_2.2.2-4_amd64.deb) ... Unpacking replacement libslang2 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libslang2 (2.2.2-4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9489 files and directories currently installed.) Preparing to replace libattr1 1:2.4.43-2 (using .../libattr1_1%3a2.4.44-2_amd64.deb) ... Unpacking replacement libattr1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libattr1 (1:2.4.44-2) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9489 files and directories currently installed.) Preparing to replace libacl1 2.2.47-2 (using .../libacl1_2.2.49-4_amd64.deb) ... Unpacking replacement libacl1 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libacl1 (2.2.49-4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9490 files and directories currently installed.) Preparing to replace libcomerr2 1.41.3-1 (using .../libcomerr2_1.41.12-4stable1_amd64.deb) ... Unpacking replacement libcomerr2 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libcomerr2 (1.41.12-4stable1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9490 files and directories currently installed.) Preparing to replace libpam-runtime 1.0.1-5+lenny1 (using .../libpam-runtime_1.1.1-6.1+squeeze1_all.deb) ... Unpacking replacement libpam-runtime ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libpam-runtime (1.1.1-6.1+squeeze1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9507 files and directories currently installed.) Preparing to replace libss2 1.41.3-1 (using .../libss2_1.41.12-4stable1_amd64.deb) ... Unpacking replacement libss2 ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libss2 (1.41.12-4stable1) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9507 files and directories currently installed.) Preparing to replace gcc-4.3-base 4.3.2-1.1 (using .../gcc-4.3-base_4.3.5-4_amd64.deb) ... Unpacking replacement gcc-4.3-base ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up gcc-4.3-base (4.3.5-4) ... Can not write log, openpty() failed (/dev/pts not mounted?) (Reading database ... 9506 files and directories currently installed.) Preparing to replace adduser 3.110 (using .../adduser_3.112+nmu2_all.deb) ... Unpacking replacement adduser ... Selecting previously deselected package libudev0. Unpacking libudev0 (from .../libudev0_164-3_amd64.deb) ... Preparing to replace procps 1:3.2.7-11 (using .../procps_1%3a3.2.8-9squeeze1_amd64.deb) ... invoke-rc.d: policy-rc.d denied execution of stop. Unpacking replacement procps ... Preparing to replace libdb4.6 4.6.21-11 (using .../libdb4.6_4.6.21-16_amd64.deb) ... Unpacking replacement libdb4.6 ... Preparing to replace ucf 3.0016 (using .../ucf_3.0025+nmu1_all.deb) ... Unpacking replacement ucf ... Preparing to replace libdevmapper1.02.1 2:1.02.27-4 (using .../libdevmapper1.02.1_2%3a1.02.48-5_amd64.deb) ... Unpacking replacement libdevmapper1.02.1 ... Selecting previously deselected package dmsetup. Unpacking dmsetup (from .../dmsetup_2%3a1.02.48-5_amd64.deb) ... Preparing to replace libreadline5 5.2-3.1 (using .../libreadline5_5.2-7_amd64.deb) ... Unpacking replacement libreadline5 ... Preparing to replace makedev 2.3.1-88 (using .../makedev_2.3.1-89_all.deb) ... Unpacking replacement makedev ... Can not write log, openpty() failed (/dev/pts not mounted?) Setting up libssl0.9.8 (0.9.8o-4squeeze14) ... Setting up python2.6-minimal (2.6.6-8+b1) ... Setting up mime-support (3.48-1) ... Installing new version of config file /etc/mime.types ... Setting up libexpat1 (2.0.1-7+squeeze1) ... Setting up libncursesw5 (5.7+20100313-5) ... Setting up libsqlite3-0 (3.7.3-1) ... Setting up python2.6 (2.6.6-8+b1) ... Setting up python-minimal (2.6.6-3+squeeze7) ... Setting up python (2.6.6-3+squeeze7) ... Setting up python-central (0.6.16+nmu1) ... pycentral: pycentral cleanup-pkgprepare-updates: found 40 dangling symlinks pycentral: pycentral cleanup-pkgprepare-updates: checking for links owned by packages (this may take some time) pycentral: pycentral cleanup-pkgprepare-updates: removed 40 dangling symlinks not owned by any package Setting up python-egenix-mxtools (3.1.3-4) ... Setting up python2.5-minimal (2.5.5-11) ... Setting up python2.5 (2.5.5-11) ... Setting up python-support (1.0.10) ... Setting up libgfortran3 (4.4.5-8) ... Setting up libblas3gf (1.2-8) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up liblapack3gf (3.2.1-8) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up python-numpy (1:1.4.1-5) ... Setting up python-reportlab (2.4-4) ... Setting up python-biopython (1.54-1) ... Setting up mawk (1.3.3-15) ... Setting up adduser (3.112+nmu2) ... Setting up libudev0 (164-3) ... Setting up procps (1:3.2.8-9squeeze1) ... Installing new version of config file /etc/init.d/procps ... Installing new version of config file /etc/sysctl.conf ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libdb4.6 (4.6.21-16) ... Setting up ucf (3.0025+nmu1) ... Setting up libreadline5 (5.2-7) ... Setting up makedev (2.3.1-89) ... Processing triggers for python-central ... Setting up python-egenix-mxtexttools (3.1.3-4) ... Processing triggers for python-central ... Setting up dmsetup (2:1.02.48-5) ... Setting up libdevmapper1.02.1 (2:1.02.48-5) ... Processing triggers for python-support ... 2m46.6s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', '-yf', 'dist-upgrade'] 2m46.6s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-cache', 'show', 'python-biopython-martel'] 2m47.7s DUMP: Package: python-biopython-martel Status: install ok installed Priority: optional Section: python Installed-Size: 281 Maintainer: Debian-Med Packaging Team Architecture: all Source: python-biopython Version: 1.45-3 Replaces: python2.3-biopython-martel (<< 1.42-1), python2.4-biopython-martel (<< 1.42-1) Provides: python2.4-biopython-martel, python2.5-biopython-martel Depends: python (>= 2.3), python-support (>= 0.7.1), python-biopython Conflicts: python2.3-biopython-martel (<< 1.42-1), python2.4-biopython-martel (<< 1.42-1) Description: Flat file parser for the Biopython library Martel uses regular expression format definition to generate a parser for flat- and semi-structured files. The parse tree information is passed back to the caller using XML SAX events. In other words, Martel lets you parse flat files as if they are in XML. Homepage: http://biopython.org Python-Version: 2.4, 2.5 2m47.7s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-cache', 'show', 'python-biopython-martel'] 2m47.7s INFO: apt-cache does not know about any of the requested packages 2m47.7s INFO: Running scripts post_distupgrade 2m47.7s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_distupgrade_exceptions'] 2m47.7s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_distupgrade_exceptions'] 2m47.7s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_distupgrade_experimental'] 2m47.7s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_distupgrade_experimental'] 2m47.7s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_distupgrade_hack_debsums'] 2m47.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_distupgrade_hack_debsums'] 2m47.8s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_distupgrade_squeeze-fake-essential'] 2m47.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_distupgrade_squeeze-fake-essential'] 2m47.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m48.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m48.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m49.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m49.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m50.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m50.1s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--get-selections', '*'] 2m50.1s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diff install diffutils install dmsetup install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.2-base install gcc-4.3-base install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblas3gf install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.5 install libdb4.6 install libdb4.8 install libdevmapper1.02.1 install libexpat1 install libgcc1 install libgfortran3 install liblapack3gf install liblocale-gettext-perl install liblzma2 install libncurses5 install libncursesw5 install libpam-modules install libpam-runtime install libpam0g install libreadline5 install libreadline6 install libselinux1 install libsepol1 install libslang2 install libsqlite3-0 install libss2 install libssl0.9.8 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libudev0 install libusb-0.1-4 install libuuid1 install login install lsb-base install lzma install makedev install mawk install mime-support install mktemp install mount install ncurses-base install ncurses-bin install passwd install perl-base install procps install python install python-biopython install python-biopython-martel install python-central install python-egenix-mxtexttools install python-egenix-mxtools install python-minimal install python-numpy install python-reportlab install python-support install python2.5 install python2.5-minimal install python2.6 install python2.6-minimal install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 2m50.1s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--get-selections', '*'] 2m51.4s DEBUG: Starting command: ['debsums', '--root', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', '-ac'] 2m52.4s DUMP: debsums: no md5sums for libdb4.5 debsums: no md5sums for mawk 2m52.4s DEBUG: Command ok: ['debsums', '--root', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', '-ac'] 2m52.4s INFO: Running scripts pre_remove 2m52.4s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 2m52.4s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 2m52.4s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m52.5s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m52.5s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 2m52.5s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 2m52.5s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_remove_exceptions'] 2m52.6s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/pre_remove_exceptions'] 2m52.6s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', 'remove', 'python-central', 'python-egenix-mxtexttools', 'python2.6-minimal', 'libdb4.5', 'libblas3gf', 'python', 'python-numpy', 'python2.6', 'python2.5', 'python2.5-minimal', 'python-biopython', 'libsqlite3-0', 'libssl0.9.8', 'python-support', 'python-egenix-mxtools', 'python-reportlab', 'liblapack3gf', 'mime-support', 'libexpat1', 'python-minimal', 'libgfortran3', 'python-biopython-martel'] 2m54.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libblas3gf libdb4.5 libexpat1 libgfortran3 liblapack3gf libsqlite3-0 libssl0.9.8 mime-support python python-biopython python-biopython-martel python-central python-egenix-mxtexttools python-egenix-mxtools python-minimal python-numpy python-reportlab python-support python2.5 python2.5-minimal python2.6 python2.6-minimal 0 upgraded, 0 newly installed, 22 to remove and 0 not upgraded. After this operation, 68.3 MB disk space will be freed. (Reading database ... 9554 files and directories currently installed.) Removing python-biopython-martel ... Removing python-biopython ... Removing python-numpy ... Removing liblapack3gf ... Removing libblas3gf ... Removing libdb4.5 ... Removing python-reportlab ... Removing python-support ... Removing python-egenix-mxtexttools ... Removing python-egenix-mxtools ... Removing python-central ... Removing python ... Removing python2.6 ... Removing libexpat1 ... Removing libgfortran3 ... Removing python2.5 ... Removing libsqlite3-0 ... Removing python-minimal ... Removing python2.6-minimal ... Removing libssl0.9.8 ... Removing mime-support ... Removing python2.5-minimal ... 2m54.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', 'remove', 'python-central', 'python-egenix-mxtexttools', 'python2.6-minimal', 'libdb4.5', 'libblas3gf', 'python', 'python-numpy', 'python2.6', 'python2.5', 'python2.5-minimal', 'python-biopython', 'libsqlite3-0', 'libssl0.9.8', 'python-support', 'python-egenix-mxtools', 'python-reportlab', 'liblapack3gf', 'mime-support', 'libexpat1', 'python-minimal', 'libgfortran3', 'python-biopython-martel'] 2m54.8s INFO: Running scripts post_remove 2m54.8s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_remove_exceptions'] 2m54.9s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_remove_exceptions'] 2m54.9s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--purge', 'python-central', 'python-egenix-mxtexttools', 'python2.6-minimal', 'libdb4.5', 'libblas3gf', 'python', 'python-numpy', 'python2.6', 'python2.5', 'python2.5-minimal', 'python-biopython', 'libsqlite3-0', 'libssl0.9.8', 'python-support', 'python-egenix-mxtools', 'python-reportlab', 'liblapack3gf', 'mime-support', 'libexpat1', 'python-minimal', 'libgfortran3'] 2m55.7s DUMP: (Reading database ... 6426 files and directories currently installed.) Removing python-central ... Purging configuration files for python-central ... dpkg: warning: ignoring request to remove python-egenix-mxtexttools which isn't installed. Removing python2.6-minimal ... Purging configuration files for python2.6-minimal ... dpkg: warning: ignoring request to remove libdb4.5 which isn't installed. Removing libblas3gf ... Purging configuration files for libblas3gf ... Removing python ... Purging configuration files for python ... dpkg: warning: ignoring request to remove python-numpy which isn't installed. Removing python2.6 ... Purging configuration files for python2.6 ... Removing python2.5 ... Purging configuration files for python2.5 ... Removing python2.5-minimal ... Purging configuration files for python2.5-minimal ... dpkg: warning: ignoring request to remove python-biopython which isn't installed. Removing libsqlite3-0 ... Purging configuration files for libsqlite3-0 ... Removing libssl0.9.8 ... Purging configuration files for libssl0.9.8 ... Removing python-support ... Purging configuration files for python-support ... dpkg: warning: ignoring request to remove python-egenix-mxtools which isn't installed. dpkg: warning: ignoring request to remove python-reportlab which isn't installed. Removing liblapack3gf ... Purging configuration files for liblapack3gf ... Removing mime-support ... Purging configuration files for mime-support ... Removing libexpat1 ... Purging configuration files for libexpat1 ... dpkg: warning: ignoring request to remove python-minimal which isn't installed. Removing libgfortran3 ... Purging configuration files for libgfortran3 ... 2m55.7s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--purge', 'python-central', 'python-egenix-mxtexttools', 'python2.6-minimal', 'libdb4.5', 'libblas3gf', 'python', 'python-numpy', 'python2.6', 'python2.5', 'python2.5-minimal', 'python-biopython', 'libsqlite3-0', 'libssl0.9.8', 'python-support', 'python-egenix-mxtools', 'python-reportlab', 'liblapack3gf', 'mime-support', 'libexpat1', 'python-minimal', 'libgfortran3'] 2m55.7s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--purge', 'python-biopython-martel'] 2m55.8s DUMP: dpkg: warning: ignoring request to remove python-biopython-martel which isn't installed. 2m55.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--purge', 'python-biopython-martel'] 2m55.8s INFO: Running scripts post_purge 2m55.8s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_purge_exceptions'] 2m55.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'tmp/scripts/post_purge_exceptions'] 2m55.8s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--purge', '--pending'] 2m55.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--purge', '--pending'] 2m55.8s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--remove', '--pending'] 2m55.8s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg', '--remove', '--pending'] 2m55.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m56.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m56.2s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg-divert', '--list'] 2m56.3s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash diversion of /bin/sh to /bin/sh.distrib by dash 2m56.3s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'dpkg-divert', '--list'] 2m56.3s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', 'clean'] 2m56.3s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'apt-get', 'clean'] 2m57.3s INFO: Warning: Package purging left files on system: /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf not owned 2m57.7s DEBUG: Starting command: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'umount', '/proc'] 2m57.7s DEBUG: Command ok: ['chroot', '/org/piuparts.debian.org/tmp/tmpxYqlAQ', 'umount', '/proc'] 2m57.7s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m58.0s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/org/piuparts.debian.org/tmp/tmpxYqlAQ'] 2m58.0s DEBUG: Removed directory tree at /org/piuparts.debian.org/tmp/tmpxYqlAQ 2m58.1s INFO: PASS: Upgrading between Debian distributions. 2m58.1s INFO: PASS: All tests. 2m58.1s INFO: piuparts run ends. ret=0 End: 2013-03-26 00:25:01 UTC