Start: 2025-02-09 16:36:45 GMT [oldstable] Package: hinge Source: hinge (0.5.0-6) Version: 0.5.0-6+b2 Installed-Size: 2928 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.27), libfmt7 (>= 7.1.3+ds1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), python3, daligner, dazzdb, dascrubber, python3-numpy, python3-ujson, python3-colormap, python3-pbcore, python3-networkx, python3-matplotlib Description: long read genome assembler based on hinging Homepage: https://github.com/HingeAssembler/HINGE Description-md5: 796f6bb30e0dd11acb73bb5eeeaf4c08 Section: science Priority: optional Filename: pool/main/h/hinge/hinge_0.5.0-6+b2_amd64.deb Size: 442168 MD5sum: 65c72e5a3cb518e611a487d2ab86936f SHA256: 044461c8d4f531ffea034fbc59370dbbaec907135e5d75da0f96f8c8297e0310 [stable] Package: hinge Source: hinge (0.5.0-7) Version: 0.5.0-7+b1 Installed-Size: 3312 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libfmt9 (>= 9.0.0+ds1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 11), zlib1g (>= 1:1.1.4), python3, daligner, dazzdb, dascrubber, python3-numpy, python3-ujson, python3-colormap, python3-pbcore, python3-networkx, python3-matplotlib Description: long read genome assembler based on hinging Homepage: https://github.com/HingeAssembler/HINGE Description-md5: 796f6bb30e0dd11acb73bb5eeeaf4c08 Section: science Priority: optional Filename: pool/main/h/hinge/hinge_0.5.0-7+b1_amd64.deb Size: 505728 MD5sum: 9b89d01939bf5489ba786271aec9c03c SHA256: 940548451cd461bdf2b0c520e85b5e9def9d7faa05bd1c1a2bddd0585dc54525 [testing] Package: hinge Source: hinge (0.5.0-7) Version: 0.5.0-7+b3 Installed-Size: 3096 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.38), libfmt10 (>= 10.1.1+ds1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4), python3, daligner, dazzdb, dascrubber, python3-numpy, python3-ujson, python3-colormap, python3-pbcore, python3-networkx, python3-matplotlib Description: long read genome assembler based on hinging Homepage: https://github.com/HingeAssembler/HINGE Description-md5: 796f6bb30e0dd11acb73bb5eeeaf4c08 Section: science Priority: optional Filename: pool/main/h/hinge/hinge_0.5.0-7+b3_amd64.deb Size: 477416 MD5sum: 6cb86b393d16f7bd532afd92345c2246 SHA256: 1c5d68715adc3b49c32dbadbd23a1899b2bbac8d712abf8f4a66d4ad8d7c8c68 [sid] Package: hinge Source: hinge (0.5.0-7) Version: 0.5.0-7+b3 Installed-Size: 3096 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.38), libfmt10 (>= 10.1.1+ds1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4), python3, daligner, dazzdb, dascrubber, python3-numpy, python3-ujson, python3-colormap, python3-pbcore, python3-networkx, python3-matplotlib Description: long read genome assembler based on hinging Homepage: https://github.com/HingeAssembler/HINGE Description-md5: 796f6bb30e0dd11acb73bb5eeeaf4c08 Section: science Priority: optional Filename: pool/main/h/hinge/hinge_0.5.0-7+b3_amd64.deb Size: 477416 MD5sum: 6cb86b393d16f7bd532afd92345c2246 SHA256: 1c5d68715adc3b49c32dbadbd23a1899b2bbac8d712abf8f4a66d4ad8d7c8c68 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d oldstable -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/oldstable222sid/reference-chroot-metadata.dat --apt hinge=0.5.0-7+b3 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d oldstable -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/oldstable222sid/reference-chroot-metadata.dat --apt hinge=0.5.0-7+b3 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpuk_9m0zi 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpuk_9m0zi 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/proc'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/proc'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/pts'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/pts'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/ptmx'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/ptmx'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/console'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/console'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/shm'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/shm'] 0m0.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m0.2s DEBUG: Created policy-rc.d and chmodded it. 0m0.2s DEBUG: Created resolv.conf. 0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpuk_9m0zi/tmp/scripts/ 0m0.2s INFO: Running scripts post_chroot_unpack 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', 'update'] 0m0.6s DUMP: Hit:1 http://deb.debian.org/debian bullseye InRelease Reading package lists... 0m0.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', 'update'] 0m0.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-yf', 'dist-upgrade'] 0m0.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m0.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-yf', 'dist-upgrade'] 0m0.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m0.9s DUMP: f58ca9ba0b3223edf5b7797c101a5448 - 0m0.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m0.9s INFO: Running scripts post_setup 0m0.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_dummy_users'] 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_dummy_users'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_forbid_home'] 0m1.4s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_forbid_home'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_force-unsafe-io'] 0m1.4s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_force-unsafe-io'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_minimize'] 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_minimize'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_squeeze-backports'] 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_squeeze-backports'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_zz_backports'] 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_setup_zz_backports'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m1.4s DUMP: install ok installed adduser adduser 3.118+deb11u1 install ok installed apt apt 2.2.4 install ok installed base-files base-files 11.1+deb11u11 install ok installed base-passwd base-passwd 3.5.51 install ok installed bash bash 5.1-2+deb11u1 install ok installed bsdutils bsdutils 1:2.36.1-8+deb11u2 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-5 install ok installed debconf debconf 1.5.77 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1+deb11u1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-5 install ok installed dpkg dpkg 1.20.13 install ok installed e2fsprogs e2fsprogs 1.46.2-2 install ok installed findutils findutils 4.8.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-22 install ok installed gpgv gpgv 2.2.27-2+deb11u2 install ok installed grep grep 3.6-1+deb11u1 install ok installed gzip gzip 1.10-4+deb11u1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.60 install ok installed libacl1:amd64 libacl1 2.2.53-10 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.2.4 install ok installed libattr1:amd64 libattr1 1:2.4.48-6 install ok installed libaudit-common libaudit-common 1:3.0-2 install ok installed libaudit1:amd64 libaudit1 1:3.0-2 install ok installed libblkid1:amd64 libblkid1 2.36.1-8+deb11u2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-13+deb11u11 install ok installed libc6:amd64 libc6 2.31-13+deb11u11 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcom-err2:amd64 libcom-err2 1.46.2-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.18-4 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.8 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.260 install ok installed libext2fs2:amd64 libext2fs2 1.46.2-2 install ok installed libffi7:amd64 libffi7 3.3-6 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.1-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-6 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1+deb11u1 install ok installed libgnutls30:amd64 libgnutls30 3.7.1-5+deb11u5 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-6+deb11u5 install ok installed libhogweed6:amd64 libhogweed6 3.7.3-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-5 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-6+deb11u5 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-6+deb11u5 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-6+deb11u5 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1~deb11u1 install ok installed libmount1:amd64 libmount1 2.36.1-8+deb11u2 install ok installed libnettle8:amd64 libnettle8 3.7.3-1 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.22-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-9+deb11u1 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-9+deb11u1 install ok installed libpam-runtime libpam-runtime 1.4.0-9+deb11u1 install ok installed libpam0g:amd64 libpam0g 1.4.0-9+deb11u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.36-2+deb11u1 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.5.1-1+deb11u1 install ok installed libselinux1:amd64 libselinux1 3.1-3 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b2 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-8+deb11u2 install ok installed libss2:amd64 libss2 1.46.2-2 install ok installed libssl1.1:amd64 libssl1.1 1.1.1w-0+deb11u1 install ok installed libstdc++6:amd64 libstdc++6 10.2.1-6 install ok installed libsystemd0:amd64 libsystemd0 247.3-7+deb11u5 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2+deb11u1 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-2+deb11u2 install ok installed libtirpc-common libtirpc-common 1.3.1-1+deb11u1 install ok installed libtirpc3:amd64 libtirpc3 1.3.1-1+deb11u1 install ok installed libudev1:amd64 libudev1 247.3-7+deb11u5 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-8+deb11u2 install ok installed libxxhash0:amd64 libxxhash0 0.8.0-2 install ok installed libzstd1:amd64 libzstd1 1.4.8+dfsg-2.1 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.46.2-2 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36.1-8+deb11u2 install ok installed ncurses-base ncurses-base 6.2+20201114-2+deb11u2 install ok installed ncurses-bin ncurses-bin 6.2+20201114-2+deb11u2 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.32.1-4+deb11u3 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-7+deb11u1 install ok installed tar tar 1.34+dfsg-1+deb11u1 install ok installed tzdata tzdata 2024a-0+deb11u1 install ok installed util-linux util-linux 2.36.1-8+deb11u2 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2+deb11u2 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m1.4s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/oldstable222sid/reference-chroot-metadata.dat 0m1.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 0m1.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 0m1.7s INFO: Running scripts is_testable 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/is_testable_uninstallable'] 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/is_testable_uninstallable'] 0m1.7s INFO: Running scripts pre_test 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_test_exceptions'] 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_test_exceptions'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_test_root_password'] 0m1.7s DUMP: New password: Retype new password: passwd: password updated successfully 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_test_root_password'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'show', '--no-all-versions', 'hinge'] 0m1.8s DUMP: Package: hinge Source: hinge (0.5.0-6) Version: 0.5.0-6+b2 Installed-Size: 2928 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.27), libfmt7 (>= 7.1.3+ds1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), python3, daligner, dazzdb, dascrubber, python3-numpy, python3-ujson, python3-colormap, python3-pbcore, python3-networkx, python3-matplotlib Description-en: long read genome assembler based on hinging HINGE is a genome assembler that seeks to achieve optimal repeat resolution by distinguishing repeats that can be resolved given the data from those that cannot. This is accomplished by adding ??hinges?? to reads for constructing an overlap graph where only unresolvable repeats are merged. As a result, HINGE combines the error resilience of overlap-based assemblers with repeat-resolution capabilities of de Bruijn graph assemblers. Description-md5: 796f6bb30e0dd11acb73bb5eeeaf4c08 Homepage: https://github.com/HingeAssembler/HINGE Section: science Priority: optional Filename: pool/main/h/hinge/hinge_0.5.0-6+b2_amd64.deb Size: 442168 MD5sum: 65c72e5a3cb518e611a487d2ab86936f SHA256: 044461c8d4f531ffea034fbc59370dbbaec907135e5d75da0f96f8c8297e0310 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'show', '--no-all-versions', 'hinge'] 0m1.8s INFO: apt-cache knows about the following packages: hinge 0m1.8s INFO: Running scripts pre_install 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_database-server'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_database-server'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_exceptions'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_exceptions'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_extras'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_extras'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy'] 0m1.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release v=11.11,o=Debian,a=oldstable,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy'] 0m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy', 'hinge'] 0m1.9s DUMP: hinge: Installed: (none) Candidate: 0.5.0-6+b2 Version table: 0.5.0-6+b2 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 0m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy', 'hinge'] 0m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-y', 'install', 'hinge'] 0m10.4s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: daligner dascrubber dazzdb fonts-lyx libblas3 libbrotli1 libbsd0 libcurl3-gnutls libdeflate0 libdouble-conversion3 libexpat1 libfmt7 libfreetype6 libgdbm-compat4 libgdbm6 libgfortran5 libgomp1 libhts3 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui liblapack3 liblcms2-2 libldap-2.4-2 libmd0 libmpdec3 libncursesw6 libnghttp2-14 libperl5.32 libpng16-16 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libtiff5 libwebp6 libwebpdemux2 libwebpmux3 libxau6 libxcb1 libxdmcp6 mailcap media-types mime-support perl perl-modules-5.32 python-matplotlib-data python3 python3-appdirs python3-biopython python3-colorama python3-colorlog python3-colormap python3-cycler python3-dateutil python3-decorator python3-easydev python3-kiwisolver python3-matplotlib python3-minimal python3-networkx python3-numpy python3-pbcore python3-pexpect python3-pil python3-pkg-resources python3-ptyprocess python3-pyparsing python3-pysam python3-reportlab python3-reportlab-accel python3-six python3-ujson python3.9 python3.9-minimal readline-common ttf-bitstream-vera Suggested packages: gdbm-l10n libjs-jquery-ui-docs liblcms2-utils sensible-utils perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make libtap-harness-archive-perl python3-doc python3-tk python3-venv bwa clustalo clustalw dialign dssp emboss fasttree mafft muscle phylip phyml prank probcons python3-mysqldb python3-mmtf python3-rdflib python3-renderpm python3-psycopg2 python3-scipy raxml samtools t-coffee wise w3-dtd-mathml python-cycler-doc dvipng ffmpeg ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-nose python3-pyqt5 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra ttf-staypuft python-networkx-doc gcc gfortran python-numpy-doc python3-dev python3-numpy-dbg python3-pytest python-pbcore-doc python-pexpect-doc python-pil-doc python3-pil-dbg python3-setuptools python-pyparsing-doc pdf-viewer python3-egenix-mxtexttools python-reportlab-doc python3.9-venv python3.9-doc binutils binfmt-support readline-doc Recommended packages: ca-certificates javascript-common libldap-common libgpm2 publicsuffix libsasl2-modules bzip2 file xz-utils netbase python-biopython-doc ncbi-blast+ python3-tk python3-gdal python3-pydot python3-pygraphviz python3-scipy python3-yaml python3-h5py python3-olefile python3-renderpm The following NEW packages will be installed: daligner dascrubber dazzdb fonts-lyx hinge libblas3 libbrotli1 libbsd0 libcurl3-gnutls libdeflate0 libdouble-conversion3 libexpat1 libfmt7 libfreetype6 libgdbm-compat4 libgdbm6 libgfortran5 libgomp1 libhts3 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui liblapack3 liblcms2-2 libldap-2.4-2 libmd0 libmpdec3 libncursesw6 libnghttp2-14 libperl5.32 libpng16-16 libpsl5 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libtiff5 libwebp6 libwebpdemux2 libwebpmux3 libxau6 libxcb1 libxdmcp6 mailcap media-types mime-support perl perl-modules-5.32 python-matplotlib-data python3 python3-appdirs python3-biopython python3-colorama python3-colorlog python3-colormap python3-cycler python3-dateutil python3-decorator python3-easydev python3-kiwisolver python3-matplotlib python3-minimal python3-networkx python3-numpy python3-pbcore python3-pexpect python3-pil python3-pkg-resources python3-ptyprocess python3-pyparsing python3-pysam python3-reportlab python3-reportlab-accel python3-six python3-ujson python3.9 python3.9-minimal readline-common ttf-bitstream-vera 0 upgraded, 87 newly installed, 0 to remove and 0 not upgraded. Need to get 42.6 MB of archives. After this operation, 170 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 perl-modules-5.32 all 5.32.1-4+deb11u3 [2823 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 libgdbm6 amd64 1.19-2 [64.9 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 libgdbm-compat4 amd64 1.19-2 [44.7 kB] Get:4 http://deb.debian.org/debian bullseye/main amd64 libperl5.32 amd64 5.32.1-4+deb11u3 [4121 kB] Get:5 http://deb.debian.org/debian bullseye/main amd64 perl amd64 5.32.1-4+deb11u3 [293 kB] Get:6 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-minimal amd64 3.9.2-1 [801 kB] Get:7 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2+deb11u5 [98.2 kB] Get:8 http://deb.debian.org/debian bullseye/main amd64 python3.9-minimal amd64 3.9.2-1 [1955 kB] Get:9 http://deb.debian.org/debian bullseye/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get:10 http://deb.debian.org/debian bullseye/main amd64 media-types all 4.0.0 [30.3 kB] Get:11 http://deb.debian.org/debian bullseye/main amd64 mailcap all 3.69 [31.7 kB] Get:12 http://deb.debian.org/debian bullseye/main amd64 mime-support all 3.66 [10.9 kB] Get:13 http://deb.debian.org/debian bullseye/main amd64 libmpdec3 amd64 2.5.1-1 [87.7 kB] Get:14 http://deb.debian.org/debian bullseye/main amd64 libncursesw6 amd64 6.2+20201114-2+deb11u2 [132 kB] Get:15 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get:16 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get:17 http://deb.debian.org/debian bullseye/main amd64 libsqlite3-0 amd64 3.34.1-3 [797 kB] Get:18 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-stdlib amd64 3.9.2-1 [1684 kB] Get:19 http://deb.debian.org/debian bullseye/main amd64 python3.9 amd64 3.9.2-1 [466 kB] Get:20 http://deb.debian.org/debian bullseye/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get:21 http://deb.debian.org/debian bullseye/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get:22 http://deb.debian.org/debian bullseye/main amd64 daligner amd64 1.0+git20200727.ed40ce5-3 [205 kB] Get:23 http://deb.debian.org/debian bullseye/main amd64 dascrubber amd64 1.1-2 [169 kB] Get:24 http://deb.debian.org/debian bullseye/main amd64 dazzdb amd64 1.0+git20201103.8d98c37-1+deb11u1 [210 kB] Get:25 http://deb.debian.org/debian bullseye/main amd64 fonts-lyx all 2.3.6-1 [205 kB] Get:26 http://deb.debian.org/debian bullseye/main amd64 libfmt7 amd64 7.1.3+ds1-5 [110 kB] Get:27 http://deb.debian.org/debian bullseye/main amd64 libgomp1 amd64 10.2.1-6 [99.9 kB] Get:28 http://deb.debian.org/debian bullseye/main amd64 python3-pkg-resources all 52.0.0-4 [190 kB] Get:29 http://deb.debian.org/debian bullseye/main amd64 libblas3 amd64 3.9.0-3+deb11u1 [153 kB] Get:30 http://deb.debian.org/debian bullseye/main amd64 libquadmath0 amd64 10.2.1-6 [145 kB] Get:31 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.1-6 [727 kB] Get:32 http://deb.debian.org/debian bullseye/main amd64 liblapack3 amd64 3.9.0-3+deb11u1 [2166 kB] Get:33 http://deb.debian.org/debian bullseye/main amd64 python3-numpy amd64 1:1.19.5-1 [2693 kB] Get:34 http://deb.debian.org/debian bullseye/main amd64 libdouble-conversion3 amd64 3.1.5-6.1 [41.0 kB] Get:35 http://deb.debian.org/debian bullseye/main amd64 python3-ujson amd64 4.0.2-1 [21.8 kB] Get:36 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get:37 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery-ui all 1.12.1+dfsg-8+deb11u2 [232 kB] Get:38 http://deb.debian.org/debian bullseye/main amd64 ttf-bitstream-vera all 1.10-8.1 [223 kB] Get:39 http://deb.debian.org/debian bullseye/main amd64 python-matplotlib-data all 3.3.4-1 [4153 kB] Get:40 http://deb.debian.org/debian bullseye/main amd64 python3-six all 1.16.0-2 [17.5 kB] Get:41 http://deb.debian.org/debian bullseye/main amd64 python3-dateutil all 2.8.1-6 [79.2 kB] Get:42 http://deb.debian.org/debian bullseye/main amd64 python3-pyparsing all 2.4.7-1 [109 kB] Get:43 http://deb.debian.org/debian bullseye/main amd64 python3-cycler all 0.10.0-3 [8084 B] Get:44 http://deb.debian.org/debian bullseye/main amd64 python3-kiwisolver amd64 1.3.1-1+b1 [55.7 kB] Get:45 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get:46 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get:47 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.4+dfsg-1+deb11u1 [418 kB] Get:48 http://deb.debian.org/debian bullseye/main amd64 libimagequant0 amd64 2.12.2-1.1 [32.5 kB] Get:49 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get:50 http://deb.debian.org/debian bullseye/main amd64 liblcms2-2 amd64 2.12~rc1-2 [150 kB] Get:51 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get:52 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:53 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1+deb11u2 [259 kB] Get:54 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1+deb11u5 [290 kB] Get:55 http://deb.debian.org/debian bullseye/main amd64 libwebpdemux2 amd64 0.6.1-2.1+deb11u2 [87.8 kB] Get:56 http://deb.debian.org/debian bullseye/main amd64 libwebpmux3 amd64 0.6.1-2.1+deb11u2 [97.7 kB] Get:57 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:58 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get:59 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1+deb11u1 [108 kB] Get:60 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:61 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get:62 http://deb.debian.org/debian bullseye/main amd64 python3-pil amd64 8.1.2+dfsg-0.3+deb11u2 [446 kB] Get:63 http://deb.debian.org/debian bullseye/main amd64 python3-matplotlib amd64 3.3.4-1 [4163 kB] Get:64 http://deb.debian.org/debian bullseye/main amd64 python3-colorama all 0.4.4-1 [28.5 kB] Get:65 http://deb.debian.org/debian bullseye/main amd64 python3-colorlog all 4.7.2-1 [25.6 kB] Get:66 http://deb.debian.org/debian bullseye/main amd64 python3-ptyprocess all 0.7.0-1 [13.6 kB] Get:67 http://deb.debian.org/debian bullseye/main amd64 python3-pexpect all 4.8.0-2 [54.9 kB] Get:68 http://deb.debian.org/debian bullseye/main amd64 python3-appdirs all 1.4.4-1 [12.7 kB] Get:69 http://deb.debian.org/debian bullseye/main amd64 python3-easydev all 0.10.1+dfsg-1 [37.9 kB] Get:70 http://deb.debian.org/debian bullseye/main amd64 python3-colormap all 1.0.3-1 [15.2 kB] Get:71 http://deb.debian.org/debian bullseye/main amd64 python3-reportlab-accel amd64 3.5.59-2 [39.1 kB] Get:72 http://deb.debian.org/debian bullseye/main amd64 python3-reportlab all 3.5.59-2 [575 kB] Get:73 http://deb.debian.org/debian bullseye/main amd64 python3-biopython amd64 1.78+dfsg-4 [1402 kB] Get:74 http://deb.debian.org/debian bullseye/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1+deb11u1 [69.1 kB] Get:75 http://deb.debian.org/debian bullseye/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1+deb11u1 [106 kB] Get:76 http://deb.debian.org/debian bullseye/main amd64 libldap-2.4-2 amd64 2.4.57+dfsg-3+deb11u1 [232 kB] Get:77 http://deb.debian.org/debian bullseye/main amd64 libnghttp2-14 amd64 1.43.0-1+deb11u1 [77.2 kB] Get:78 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:79 http://deb.debian.org/debian bullseye/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:80 http://deb.debian.org/debian bullseye/main amd64 libssh2-1 amd64 1.9.0-2+deb11u1 [156 kB] Get:81 http://deb.debian.org/debian bullseye/main amd64 libcurl3-gnutls amd64 7.74.0-1.3+deb11u13 [344 kB] Get:82 http://deb.debian.org/debian bullseye/main amd64 libhts3 amd64 1.11-4 [378 kB] Get:83 http://deb.debian.org/debian bullseye/main amd64 python3-pysam amd64 0.15.4+ds-3+b2 [1536 kB] Get:84 http://deb.debian.org/debian bullseye/main amd64 python3-pbcore all 1.7.1+git20200430.a127b1e+dfsg-1 [2881 kB] Get:85 http://deb.debian.org/debian bullseye/main amd64 python3-decorator all 4.4.2-2 [15.8 kB] Get:86 http://deb.debian.org/debian bullseye/main amd64 python3-networkx all 2.5+ds-2 [900 kB] Get:87 http://deb.debian.org/debian bullseye/main amd64 hinge amd64 0.5.0-6+b2 [442 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 42.6 MB in 0s (163 MB/s) Selecting previously unselected package perl-modules-5.32. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6674 files and directories currently installed.) Preparing to unpack .../0-perl-modules-5.32_5.32.1-4+deb11u3_all.deb ... Unpacking perl-modules-5.32 (5.32.1-4+deb11u3) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../1-libgdbm6_1.19-2_amd64.deb ... Unpacking libgdbm6:amd64 (1.19-2) ... Selecting previously unselected package libgdbm-compat4:amd64. Preparing to unpack .../2-libgdbm-compat4_1.19-2_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.19-2) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../3-libperl5.32_5.32.1-4+deb11u3_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-4+deb11u3) ... Selecting previously unselected package perl. Preparing to unpack .../4-perl_5.32.1-4+deb11u3_amd64.deb ... Unpacking perl (5.32.1-4+deb11u3) ... Selecting previously unselected package libpython3.9-minimal:amd64. Preparing to unpack .../5-libpython3.9-minimal_3.9.2-1_amd64.deb ... Unpacking libpython3.9-minimal:amd64 (3.9.2-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../6-libexpat1_2.2.10-2+deb11u5_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-2+deb11u5) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../7-python3.9-minimal_3.9.2-1_amd64.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:amd64 (3.9.2-1) ... Setting up libexpat1:amd64 (2.2.10-2+deb11u5) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8939 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.9.2-3_amd64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package mailcap. Preparing to unpack .../02-mailcap_3.69_all.deb ... Unpacking mailcap (3.69) ... Selecting previously unselected package mime-support. Preparing to unpack .../03-mime-support_3.66_all.deb ... Unpacking mime-support (3.66) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../04-libmpdec3_2.5.1-1_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-1) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../05-libncursesw6_6.2+20201114-2+deb11u2_amd64.deb ... Unpacking libncursesw6:amd64 (6.2+20201114-2+deb11u2) ... Selecting previously unselected package readline-common. Preparing to unpack .../06-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../07-libreadline8_8.1-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../08-libsqlite3-0_3.34.1-3_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.34.1-3) ... Selecting previously unselected package libpython3.9-stdlib:amd64. Preparing to unpack .../09-libpython3.9-stdlib_3.9.2-1_amd64.deb ... Unpacking libpython3.9-stdlib:amd64 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../10-python3.9_3.9.2-1_amd64.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../11-libpython3-stdlib_3.9.2-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9401 files and directories currently installed.) Preparing to unpack .../00-python3_3.9.2-3_amd64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package daligner. Preparing to unpack .../01-daligner_1.0+git20200727.ed40ce5-3_amd64.deb ... Unpacking daligner (1.0+git20200727.ed40ce5-3) ... Selecting previously unselected package dascrubber. Preparing to unpack .../02-dascrubber_1.1-2_amd64.deb ... Unpacking dascrubber (1.1-2) ... Selecting previously unselected package dazzdb. Preparing to unpack .../03-dazzdb_1.0+git20201103.8d98c37-1+deb11u1_amd64.deb ... Unpacking dazzdb (1.0+git20201103.8d98c37-1+deb11u1) ... Selecting previously unselected package fonts-lyx. Preparing to unpack .../04-fonts-lyx_2.3.6-1_all.deb ... Unpacking fonts-lyx (2.3.6-1) ... Selecting previously unselected package libfmt7:amd64. Preparing to unpack .../05-libfmt7_7.1.3+ds1-5_amd64.deb ... Unpacking libfmt7:amd64 (7.1.3+ds1-5) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../06-libgomp1_10.2.1-6_amd64.deb ... Unpacking libgomp1:amd64 (10.2.1-6) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../07-python3-pkg-resources_52.0.0-4_all.deb ... Unpacking python3-pkg-resources (52.0.0-4) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../08-libblas3_3.9.0-3+deb11u1_amd64.deb ... Unpacking libblas3:amd64 (3.9.0-3+deb11u1) ... Selecting previously unselected package libquadmath0:amd64. Preparing to unpack .../09-libquadmath0_10.2.1-6_amd64.deb ... Unpacking libquadmath0:amd64 (10.2.1-6) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../10-libgfortran5_10.2.1-6_amd64.deb ... Unpacking libgfortran5:amd64 (10.2.1-6) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../11-liblapack3_3.9.0-3+deb11u1_amd64.deb ... Unpacking liblapack3:amd64 (3.9.0-3+deb11u1) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../12-python3-numpy_1%3a1.19.5-1_amd64.deb ... Unpacking python3-numpy (1:1.19.5-1) ... Selecting previously unselected package libdouble-conversion3:amd64. Preparing to unpack .../13-libdouble-conversion3_3.1.5-6.1_amd64.deb ... Unpacking libdouble-conversion3:amd64 (3.1.5-6.1) ... Selecting previously unselected package python3-ujson:amd64. Preparing to unpack .../14-python3-ujson_4.0.2-1_amd64.deb ... Unpacking python3-ujson:amd64 (4.0.2-1) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../15-libjs-jquery_3.5.1+dfsg+~3.5.5-7_all.deb ... Unpacking libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../16-libjs-jquery-ui_1.12.1+dfsg-8+deb11u2_all.deb ... Unpacking libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) ... Selecting previously unselected package ttf-bitstream-vera. Preparing to unpack .../17-ttf-bitstream-vera_1.10-8.1_all.deb ... Unpacking ttf-bitstream-vera (1.10-8.1) ... Selecting previously unselected package python-matplotlib-data. Preparing to unpack .../18-python-matplotlib-data_3.3.4-1_all.deb ... Unpacking python-matplotlib-data (3.3.4-1) ... Selecting previously unselected package python3-six. Preparing to unpack .../19-python3-six_1.16.0-2_all.deb ... Unpacking python3-six (1.16.0-2) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../20-python3-dateutil_2.8.1-6_all.deb ... Unpacking python3-dateutil (2.8.1-6) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../21-python3-pyparsing_2.4.7-1_all.deb ... Unpacking python3-pyparsing (2.4.7-1) ... Selecting previously unselected package python3-cycler. Preparing to unpack .../22-python3-cycler_0.10.0-3_all.deb ... Unpacking python3-cycler (0.10.0-3) ... Selecting previously unselected package python3-kiwisolver. Preparing to unpack .../23-python3-kiwisolver_1.3.1-1+b1_amd64.deb ... Unpacking python3-kiwisolver (1.3.1-1+b1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../24-libbrotli1_1.0.9-2+b2_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b2) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../25-libpng16-16_1.6.37-3_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.37-3) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../26-libfreetype6_2.10.4+dfsg-1+deb11u1_amd64.deb ... Unpacking libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Selecting previously unselected package libimagequant0:amd64. Preparing to unpack .../27-libimagequant0_2.12.2-1.1_amd64.deb ... Unpacking libimagequant0:amd64 (2.12.2-1.1) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../28-libjpeg62-turbo_1%3a2.0.6-4_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.0.6-4) ... Selecting previously unselected package liblcms2-2:amd64. Preparing to unpack .../29-liblcms2-2_2.12~rc1-2_amd64.deb ... Unpacking liblcms2-2:amd64 (2.12~rc1-2) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../30-libdeflate0_1.7-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.7-1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../31-libjbig0_2.1-3.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1+b2) ... Selecting previously unselected package libwebp6:amd64. Preparing to unpack .../32-libwebp6_0.6.1-2.1+deb11u2_amd64.deb ... Unpacking libwebp6:amd64 (0.6.1-2.1+deb11u2) ... Selecting previously unselected package libtiff5:amd64. Preparing to unpack .../33-libtiff5_4.2.0-1+deb11u5_amd64.deb ... Unpacking libtiff5:amd64 (4.2.0-1+deb11u5) ... Selecting previously unselected package libwebpdemux2:amd64. Preparing to unpack .../34-libwebpdemux2_0.6.1-2.1+deb11u2_amd64.deb ... Unpacking libwebpdemux2:amd64 (0.6.1-2.1+deb11u2) ... Selecting previously unselected package libwebpmux3:amd64. Preparing to unpack .../35-libwebpmux3_0.6.1-2.1+deb11u2_amd64.deb ... Unpacking libwebpmux3:amd64 (0.6.1-2.1+deb11u2) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../36-libxau6_1%3a1.0.9-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1) ... Selecting previously unselected package libmd0:amd64. Preparing to unpack .../37-libmd0_1.0.3-3_amd64.deb ... Unpacking libmd0:amd64 (1.0.3-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../38-libbsd0_0.11.3-1+deb11u1_amd64.deb ... Unpacking libbsd0:amd64 (0.11.3-1+deb11u1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../39-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../40-libxcb1_1.14-3_amd64.deb ... Unpacking libxcb1:amd64 (1.14-3) ... Selecting previously unselected package python3-pil:amd64. Preparing to unpack .../41-python3-pil_8.1.2+dfsg-0.3+deb11u2_amd64.deb ... Unpacking python3-pil:amd64 (8.1.2+dfsg-0.3+deb11u2) ... Selecting previously unselected package python3-matplotlib. Preparing to unpack .../42-python3-matplotlib_3.3.4-1_amd64.deb ... Unpacking python3-matplotlib (3.3.4-1) ... Selecting previously unselected package python3-colorama. Preparing to unpack .../43-python3-colorama_0.4.4-1_all.deb ... Unpacking python3-colorama (0.4.4-1) ... Selecting previously unselected package python3-colorlog. Preparing to unpack .../44-python3-colorlog_4.7.2-1_all.deb ... Unpacking python3-colorlog (4.7.2-1) ... Selecting previously unselected package python3-ptyprocess. Preparing to unpack .../45-python3-ptyprocess_0.7.0-1_all.deb ... Unpacking python3-ptyprocess (0.7.0-1) ... Selecting previously unselected package python3-pexpect. Preparing to unpack .../46-python3-pexpect_4.8.0-2_all.deb ... Unpacking python3-pexpect (4.8.0-2) ... Selecting previously unselected package python3-appdirs. Preparing to unpack .../47-python3-appdirs_1.4.4-1_all.deb ... Unpacking python3-appdirs (1.4.4-1) ... Selecting previously unselected package python3-easydev. Preparing to unpack .../48-python3-easydev_0.10.1+dfsg-1_all.deb ... Unpacking python3-easydev (0.10.1+dfsg-1) ... Selecting previously unselected package python3-colormap. Preparing to unpack .../49-python3-colormap_1.0.3-1_all.deb ... Unpacking python3-colormap (1.0.3-1) ... Selecting previously unselected package python3-reportlab-accel:amd64. Preparing to unpack .../50-python3-reportlab-accel_3.5.59-2_amd64.deb ... Unpacking python3-reportlab-accel:amd64 (3.5.59-2) ... Selecting previously unselected package python3-reportlab. Preparing to unpack .../51-python3-reportlab_3.5.59-2_all.deb ... Unpacking python3-reportlab (3.5.59-2) ... Selecting previously unselected package python3-biopython. Preparing to unpack .../52-python3-biopython_1.78+dfsg-4_amd64.deb ... Unpacking python3-biopython (1.78+dfsg-4) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../53-libsasl2-modules-db_2.1.27+dfsg-2.1+deb11u1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../54-libsasl2-2_2.1.27+dfsg-2.1+deb11u1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../55-libldap-2.4-2_2.4.57+dfsg-3+deb11u1_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.57+dfsg-3+deb11u1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../56-libnghttp2-14_1.43.0-1+deb11u1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.43.0-1+deb11u1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../57-libpsl5_0.21.0-1.2_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../58-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../59-libssh2-1_1.9.0-2+deb11u1_amd64.deb ... Unpacking libssh2-1:amd64 (1.9.0-2+deb11u1) ... Selecting previously unselected package libcurl3-gnutls:amd64. Preparing to unpack .../60-libcurl3-gnutls_7.74.0-1.3+deb11u13_amd64.deb ... Unpacking libcurl3-gnutls:amd64 (7.74.0-1.3+deb11u13) ... Selecting previously unselected package libhts3:amd64. Preparing to unpack .../61-libhts3_1.11-4_amd64.deb ... Unpacking libhts3:amd64 (1.11-4) ... Selecting previously unselected package python3-pysam. Preparing to unpack .../62-python3-pysam_0.15.4+ds-3+b2_amd64.deb ... Unpacking python3-pysam (0.15.4+ds-3+b2) ... Selecting previously unselected package python3-pbcore. Preparing to unpack .../63-python3-pbcore_1.7.1+git20200430.a127b1e+dfsg-1_all.deb ... Unpacking python3-pbcore (1.7.1+git20200430.a127b1e+dfsg-1) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../64-python3-decorator_4.4.2-2_all.deb ... Unpacking python3-decorator (4.4.2-2) ... Selecting previously unselected package python3-networkx. Preparing to unpack .../65-python3-networkx_2.5+ds-2_all.deb ... Unpacking python3-networkx (2.5+ds-2) ... Selecting previously unselected package hinge. Preparing to unpack .../66-hinge_0.5.0-6+b2_amd64.deb ... Unpacking hinge (0.5.0-6+b2) ... Setting up media-types (4.0.0) ... Setting up liblcms2-2:amd64 (2.12~rc1-2) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libdouble-conversion3:amd64 (3.1.5-6.1) ... Setting up libpsl5:amd64 (0.21.0-1.2) ... Setting up ttf-bitstream-vera (1.10-8.1) ... Setting up dascrubber (1.1-2) ... Setting up fonts-lyx (2.3.6-1) ... Setting up perl-modules-5.32 (5.32.1-4+deb11u3) ... Setting up libbrotli1:amd64 (1.0.9-2+b2) ... Setting up libsqlite3-0:amd64 (3.34.1-3) ... Setting up libnghttp2-14:amd64 (1.43.0-1+deb11u1) ... Setting up libdeflate0:amd64 (1.7-1) ... Setting up libgomp1:amd64 (10.2.1-6) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Setting up dazzdb (1.0+git20201103.8d98c37-1+deb11u1) ... Setting up libblas3:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.0.6-4) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libquadmath0:amd64 (10.2.1-6) ... Setting up libimagequant0:amd64 (2.12.2-1.1) ... Setting up libpng16-16:amd64 (1.6.37-3) ... Setting up libwebp6:amd64 (0.6.1-2.1+deb11u2) ... Setting up libncursesw6:amd64 (6.2+20201114-2+deb11u2) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2.1+deb11u1) ... Setting up libgfortran5:amd64 (10.2.1-6) ... Setting up libmd0:amd64 (1.0.3-3) ... Setting up libmpdec3:amd64 (2.5.1-1) ... Setting up daligner (1.0+git20200727.ed40ce5-3) ... Setting up libfmt7:amd64 (7.1.3+ds1-5) ... Setting up libssh2-1:amd64 (1.9.0-2+deb11u1) ... Setting up libtiff5:amd64 (4.2.0-1+deb11u5) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up python-matplotlib-data (3.3.4-1) ... Setting up libwebpmux3:amd64 (0.6.1-2.1+deb11u2) ... Setting up libbsd0:amd64 (0.11.3-1+deb11u1) ... Setting up readline-common (8.1-1) ... Setting up libgdbm6:amd64 (1.19-2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.14-3) ... Setting up libwebpdemux2:amd64 (0.6.1-2.1+deb11u2) ... Setting up libreadline8:amd64 (8.1-1) ... Setting up libldap-2.4-2:amd64 (2.4.57+dfsg-3+deb11u1) ... Setting up libcurl3-gnutls:amd64 (7.74.0-1.3+deb11u13) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) ... Setting up libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Setting up libgdbm-compat4:amd64 (1.19-2) ... Setting up libperl5.32:amd64 (5.32.1-4+deb11u3) ... Setting up libpython3.9-stdlib:amd64 (3.9.2-1) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up libhts3:amd64 (1.11-4) ... Setting up perl (5.32.1-4+deb11u3) ... Setting up mailcap (3.69) ... Setting up python3.9 (3.9.2-1) ... Setting up mime-support (3.66) ... Setting up python3 (3.9.2-3) ... Setting up python3-ujson:amd64 (4.0.2-1) ... Setting up python3-six (1.16.0-2) ... Setting up python3-pil:amd64 (8.1.2+dfsg-0.3+deb11u2) ... Setting up python3-decorator (4.4.2-2) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up python3-cycler (0.10.0-3) ... Setting up python3-reportlab-accel:amd64 (3.5.59-2) ... Setting up python3-kiwisolver (1.3.1-1+b1) ... Setting up python3-reportlab (3.5.59-2) ... Setting up python3-dateutil (2.8.1-6) ... Setting up python3-appdirs (1.4.4-1) ... Setting up python3-ptyprocess (0.7.0-1) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up python3-pysam (0.15.4+ds-3+b2) ... Setting up python3-colorama (0.4.4-1) ... Setting up python3-colorlog (4.7.2-1) ... Setting up python3-networkx (2.5+ds-2) ... Setting up python3-pexpect (4.8.0-2) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up python3-biopython (1.78+dfsg-4) ... Setting up python3-matplotlib (3.3.4-1) ... Setting up python3-easydev (0.10.1+dfsg-1) ... Setting up python3-pbcore (1.7.1+git20200430.a127b1e+dfsg-1) ... Setting up python3-colormap (1.0.3-1) ... Setting up hinge (0.5.0-6+b2) ... Processing triggers for libc-bin (2.31-13+deb11u11) ... 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-y', 'install', 'hinge'] 0m10.4s INFO: Running scripts post_install 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_install_exceptions'] 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_install_exceptions'] 0m10.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 0m10.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 0m10.9s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpuk_9m0zi to stable 0m10.9s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m10.9s INFO: Running scripts pre_distupgrade 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_exceptions'] 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_exceptions'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', 'update'] 0m12.6s DUMP: Get:1 http://deb.debian.org/debian bookworm InRelease [151 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 Packages [8792 kB] Get:3 http://deb.debian.org/debian bookworm/main Translation-en [6109 kB] Fetched 15.1 MB in 1s (11.0 MB/s) Reading package lists... 0m12.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', 'update'] 0m12.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-yf', 'dist-upgrade'] 1m1.3s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libfmt7 libldap-2.4-2 libmpdec3 libperl5.32 libpython3.9-minimal libpython3.9-stdlib libtiff5 libwebp6 perl-modules-5.32 python3.9 python3.9-minimal Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libsemanage1 The following NEW packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu blt cpp cpp-12 fontconfig-config fonts-dejavu-core fonts-urw-base35 g++ g++-12 gcc gcc-12 gcc-12-base libasan8 libatomic1 libbinutils libboost-dev libboost1.74-dev libc-dev-bin libc6-dev libcap2 libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libexpat1-dev libffi8 libfile-find-rule-perl libfmt9 libfontconfig1 libfontenc1 libfribidi0 libgcc-12-dev libglib2.0-0 libgprofng0 libgraphite2-3 libharfbuzz0b libhtscodecs2 libicu72 libisl23 libitm1 libjansson4 libjs-sphinxdoc libjs-underscore liblbfgsb0 libldap-2.5-0 liblerc4 liblsan0 libmpc3 libmpfr6 libnsl-dev libnumber-compare-perl libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libopenjp2-7 libperl5.36 libpython3-all-dev libpython3-dev libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libqhull-r8.0 libraqm0 libsemanage2 libsepol2 libssl3 libstdc++-12-dev libtcl8.6 libtext-glob-perl libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libx11-6 libx11-data libxext6 libxft2 libxml2 libxrender1 libxsimd-dev libxslt1.1 libxss1 linux-libc-dev perl-modules-5.36 python3-all python3-all-dev python3-attr python3-beniget python3-brotli python3-contourpy python3-dev python3-distutils python3-fonttools python3-fs python3-gast python3-lib2to3 python3-lxml python3-lz4 python3-mpmath python3-packaging python3-pil.imagetk python3-ply python3-pythran python3-renderpm python3-scipy python3-sympy python3-tk python3-tz python3-ufolib2 python3.11 python3.11-dev python3.11-minimal rpcsvc-proto sgml-base tk8.6-blt2.5 unicode-data usrmerge util-linux-extra w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core zlib1g-dev The following packages will be upgraded: adduser apt base-files base-passwd bash bsdutils coreutils daligner dascrubber dash dazzdb debconf debian-archive-keyring debianutils diffutils dpkg e2fsprogs findutils fonts-lyx gpgv grep gzip hinge hostname init-system-helpers libacl1 libapt-pkg6.0 libattr1 libaudit-common libaudit1 libblas3 libblkid1 libbrotli1 libbsd0 libbz2-1.0 libc-bin libc6 libcap-ng0 libcom-err2 libcrypt1 libcurl3-gnutls libdb5.3 libdebconfclient0 libdeflate0 libdouble-conversion3 libexpat1 libext2fs2 libfreetype6 libgcc-s1 libgcrypt20 libgdbm-compat4 libgdbm6 libgfortran5 libgmp10 libgnutls30 libgomp1 libgpg-error0 libgssapi-krb5-2 libhogweed6 libhts3 libidn2-0 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 liblz4-1 liblzma5 libmd0 libmount1 libncursesw6 libnettle8 libnghttp2-14 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libpcre3 libpng16-16 libpsl5 libpython3-stdlib libquadmath0 libreadline8 libsasl2-2 libsasl2-modules-db libseccomp2 libselinux1 libsemanage-common libsmartcols1 libsqlite3-0 libss2 libssh2-1 libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libtirpc-common libtirpc3 libudev1 libunistring2 libuuid1 libwebpdemux2 libwebpmux3 libxcb1 libxxhash0 libzstd1 login logsave lsb-base mailcap mawk media-types mount ncurses-base ncurses-bin passwd perl perl-base python-matplotlib-data python3 python3-appdirs python3-biopython python3-colorama python3-colorlog python3-colormap python3-cycler python3-dateutil python3-decorator python3-easydev python3-kiwisolver python3-matplotlib python3-minimal python3-networkx python3-numpy python3-pbcore python3-pexpect python3-pil python3-pkg-resources python3-ptyprocess python3-pyparsing python3-pysam python3-reportlab python3-reportlab-accel python3-six python3-ujson readline-common sed sysvinit-utils tar ttf-bitstream-vera tzdata util-linux zlib1g 161 upgraded, 130 newly installed, 1 to remove and 0 not upgraded. Need to get 240 MB of archives. After this operation, 892 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 base-files amd64 12.4+deb12u9 [70.8 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libc6 amd64 2.36-9+deb12u9 [2757 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libc-bin amd64 2.36-9+deb12u9 [608 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 gcc-12-base amd64 12.2.0-14 [37.5 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 libgcc-s1 amd64 12.2.0-14 [49.9 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 debianutils amd64 5.7-0.5~deb12u1 [103 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 bash amd64 5.2.15-2+b7 [1490 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 bsdutils amd64 1:2.38.1-5+deb12u3 [94.4 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libgmp10 amd64 2:6.2.1+dfsg1-1.1 [563 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 coreutils amd64 9.1-1 [2897 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 liblzma5 amd64 5.4.1-0.2 [205 kB] Get:12 http://deb.debian.org/debian bookworm/main amd64 libzstd1 amd64 1.5.4+dfsg2-5 [290 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 tar amd64 1.34+dfsg-1.2+deb12u1 [836 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 dpkg amd64 1.21.22 [1567 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 dash amd64 0.5.12-2 [91.8 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 diffutils amd64 1:3.8-4 [352 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 findutils amd64 4.9.0-4 [636 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 grep amd64 3.8-5 [421 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 gzip amd64 1.12-1 [140 kB] Get:20 http://deb.debian.org/debian bookworm/main amd64 hostname amd64 3.23+nmu1 [10.5 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 login amd64 1:4.13+dfsg1-1+b1 [616 kB] Get:22 http://deb.debian.org/debian bookworm/main amd64 libncursesw6 amd64 6.4-4 [134 kB] Get:23 http://deb.debian.org/debian bookworm/main amd64 libtinfo6 amd64 6.4-4 [331 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 ncurses-bin amd64 6.4-4 [421 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 perl-modules-5.36 all 5.36.0-7+deb12u1 [2815 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 libgdbm6 amd64 1.23-3 [72.2 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 libperl5.36 amd64 5.36.0-7+deb12u1 [4218 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 perl amd64 5.36.0-7+deb12u1 [239 kB] Get:29 http://deb.debian.org/debian bookworm/main amd64 perl-base amd64 5.36.0-7+deb12u1 [1608 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 libbz2-1.0 amd64 1.0.8-5+b1 [47.3 kB] Get:31 http://deb.debian.org/debian bookworm/main amd64 libaudit-common all 1:3.0.9-1 [10.4 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 libcap-ng0 amd64 0.8.3-1+b3 [17.1 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 libaudit1 amd64 1:3.0.9-1 [46.8 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 debconf all 1.5.82 [121 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 libpam0g amd64 1.5.2-6+deb12u1 [92.0 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 libcrypt1 amd64 1:4.4.33-2 [89.5 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 libdb5.3 amd64 5.3.28+dfsg2-1 [697 kB] Get:38 http://deb.debian.org/debian bookworm/main amd64 libgdbm-compat4 amd64 1.23-3 [48.2 kB] Get:39 http://deb.debian.org/debian bookworm/main amd64 zlib1g amd64 1:1.2.13.dfsg-1 [86.7 kB] Get:40 http://deb.debian.org/debian bookworm/main amd64 sed amd64 4.9-1 [329 kB] Get:41 http://deb.debian.org/debian bookworm/main amd64 libblkid1 amd64 2.38.1-5+deb12u3 [147 kB] Get:42 http://deb.debian.org/debian bookworm/main amd64 libpcre2-8-0 amd64 10.42-1 [261 kB] Get:43 http://deb.debian.org/debian bookworm/main amd64 libselinux1 amd64 3.4-1+b6 [73.7 kB] Get:44 http://deb.debian.org/debian bookworm/main amd64 libmount1 amd64 2.38.1-5+deb12u3 [166 kB] Get:45 http://deb.debian.org/debian bookworm/main amd64 libsmartcols1 amd64 2.38.1-5+deb12u3 [107 kB] Get:46 http://deb.debian.org/debian bookworm/main amd64 util-linux-extra amd64 2.38.1-5+deb12u3 [111 kB] Get:47 http://deb.debian.org/debian bookworm/main amd64 util-linux amd64 2.38.1-5+deb12u3 [1177 kB] Get:48 http://deb.debian.org/debian bookworm/main amd64 libgpg-error0 amd64 1.46-1 [76.9 kB] Get:49 http://deb.debian.org/debian bookworm/main amd64 libgcrypt20 amd64 1.10.1-3 [696 kB] Get:50 http://deb.debian.org/debian bookworm/main amd64 libstdc++6 amd64 12.2.0-14 [614 kB] Get:51 http://deb.debian.org/debian bookworm/main amd64 liblz4-1 amd64 1.9.4-1 [62.9 kB] Get:52 http://deb.debian.org/debian bookworm/main amd64 libcap2 amd64 1:2.66-4 [27.0 kB] Get:53 http://deb.debian.org/debian bookworm/main amd64 libsystemd0 amd64 252.33-1~deb12u1 [332 kB] Get:54 http://deb.debian.org/debian bookworm/main amd64 libudev1 amd64 252.33-1~deb12u1 [109 kB] Get:55 http://deb.debian.org/debian bookworm/main amd64 libxxhash0 amd64 0.8.1-1 [27.6 kB] Get:56 http://deb.debian.org/debian bookworm/main amd64 libapt-pkg6.0 amd64 2.6.1 [907 kB] Get:57 http://deb.debian.org/debian bookworm/main amd64 libnettle8 amd64 3.8.1-2 [288 kB] Get:58 http://deb.debian.org/debian bookworm/main amd64 libhogweed6 amd64 3.8.1-2 [328 kB] Get:59 http://deb.debian.org/debian bookworm/main amd64 libunistring2 amd64 1.0-2 [437 kB] Get:60 http://deb.debian.org/debian bookworm/main amd64 libidn2-0 amd64 2.3.3-1+b1 [124 kB] Get:61 http://deb.debian.org/debian bookworm/main amd64 libffi8 amd64 3.4.4-1 [22.9 kB] Get:62 http://deb.debian.org/debian bookworm/main amd64 libp11-kit0 amd64 0.24.1-2 [345 kB] Get:63 http://deb.debian.org/debian bookworm/main amd64 libtasn1-6 amd64 4.19.0-2 [56.6 kB] Get:64 http://deb.debian.org/debian bookworm/main amd64 libgnutls30 amd64 3.7.9-2+deb12u3 [1405 kB] Get:65 http://deb.debian.org/debian bookworm/main amd64 libsemanage-common all 3.4-1 [21.6 kB] Get:66 http://deb.debian.org/debian bookworm/main amd64 libsepol2 amd64 3.4-2.1 [276 kB] Get:67 http://deb.debian.org/debian bookworm/main amd64 libsemanage2 amd64 3.4-1+b5 [89.9 kB] Get:68 http://deb.debian.org/debian bookworm/main amd64 passwd amd64 1:4.13+dfsg1-1+b1 [972 kB] Get:69 http://deb.debian.org/debian bookworm/main amd64 libpam-modules-bin amd64 1.5.2-6+deb12u1 [75.6 kB] Get:70 http://deb.debian.org/debian bookworm/main amd64 libpam-modules amd64 1.5.2-6+deb12u1 [291 kB] Get:71 http://deb.debian.org/debian bookworm/main amd64 adduser all 3.134 [183 kB] Get:72 http://deb.debian.org/debian bookworm/main amd64 gpgv amd64 2.2.40-1.1 [648 kB] Get:73 http://deb.debian.org/debian bookworm/main amd64 debian-archive-keyring all 2023.3+deb12u1 [161 kB] Get:74 http://deb.debian.org/debian bookworm/main amd64 libseccomp2 amd64 2.5.4-1+deb12u1 [46.8 kB] Get:75 http://deb.debian.org/debian bookworm/main amd64 apt amd64 2.6.1 [1373 kB] Get:76 http://deb.debian.org/debian bookworm/main amd64 libdebconfclient0 amd64 0.270 [9900 B] Get:77 http://deb.debian.org/debian bookworm/main amd64 base-passwd amd64 3.6.1 [60.0 kB] Get:78 http://deb.debian.org/debian bookworm/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:79 http://deb.debian.org/debian bookworm/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:80 http://deb.debian.org/debian bookworm/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:81 http://deb.debian.org/debian bookworm/main amd64 usrmerge all 37~deb12u1 [13.3 kB] Get:82 http://deb.debian.org/debian bookworm/main amd64 init-system-helpers all 1.65.2 [49.8 kB] Get:83 http://deb.debian.org/debian bookworm/main amd64 ncurses-base all 6.4-4 [261 kB] Get:84 http://deb.debian.org/debian bookworm/main amd64 sysvinit-utils amd64 3.06-4 [31.0 kB] Get:85 http://deb.debian.org/debian bookworm/main amd64 lsb-base all 11.6 [4584 B] Get:86 http://deb.debian.org/debian bookworm/main amd64 logsave amd64 1.47.0-2 [19.6 kB] Get:87 http://deb.debian.org/debian bookworm/main amd64 libext2fs2 amd64 1.47.0-2 [205 kB] Get:88 http://deb.debian.org/debian bookworm/main amd64 e2fsprogs amd64 1.47.0-2 [571 kB] Get:89 http://deb.debian.org/debian bookworm/main amd64 mount amd64 2.38.1-5+deb12u3 [134 kB] Get:90 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.15-1~deb12u1 [2025 kB] Get:91 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6+deb12u5 [816 kB] Get:92 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1+deb12u1 [98.9 kB] Get:93 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6+deb12u5 [2067 kB] Get:94 http://deb.debian.org/debian bookworm/main amd64 python3-ujson amd64 5.7.0-1 [24.2 kB] Get:95 http://deb.debian.org/debian bookworm/main amd64 python3-reportlab-accel amd64 3.6.12-1+deb12u1 [38.5 kB] Get:96 http://deb.debian.org/debian bookworm/main amd64 libhts3 amd64 1.16+ds-3 [430 kB] Get:97 http://deb.debian.org/debian bookworm/main amd64 python3-pysam amd64 0.20.0+ds-3+b1 [1681 kB] Get:98 http://deb.debian.org/debian bookworm/main amd64 python3-pil amd64 9.4.0-1.1+deb12u1 [472 kB] Get:99 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1+deb12u1 [4960 kB] Get:100 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib amd64 3.6.3-1+b1 [6921 kB] Get:101 http://deb.debian.org/debian bookworm/main amd64 python3-kiwisolver amd64 1.4.4-1+b1 [60.1 kB] Get:102 http://deb.debian.org/debian bookworm/main amd64 python3-biopython amd64 1.80+dfsg-4+b1 [1593 kB] Get:103 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get:104 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get:105 http://deb.debian.org/debian bookworm/main amd64 libdouble-conversion3 amd64 3.2.1-1 [41.5 kB] Get:106 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get:107 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-2+deb12u2 [135 kB] Get:108 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-2+deb12u2 [332 kB] Get:109 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-2+deb12u2 [78.7 kB] Get:110 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-2+deb12u2 [32.6 kB] Get:111 http://deb.debian.org/debian bookworm/main amd64 libcom-err2 amd64 1.47.0-2 [19.8 kB] Get:112 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:113 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get:114 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get:115 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get:116 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1+deb12u2 [73.0 kB] Get:117 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get:118 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:119 http://deb.debian.org/debian bookworm/main amd64 libcurl3-gnutls amd64 7.88.1-10+deb12u8 [385 kB] Get:120 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get:121 http://deb.debian.org/debian bookworm/main amd64 libhtscodecs2 amd64 1.3.0-4 [87.5 kB] Get:122 http://deb.debian.org/debian bookworm/main amd64 tzdata all 2024b-0+deb12u1 [298 kB] Get:123 http://deb.debian.org/debian bookworm/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [1035 kB] Get:124 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get:125 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-5+deb12u3 [398 kB] Get:126 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get:127 http://deb.debian.org/debian bookworm/main amd64 ttf-bitstream-vera all 1.10-8.2 [223 kB] Get:128 http://deb.debian.org/debian bookworm/main amd64 libfontenc1 amd64 1:1.1.4-1 [24.3 kB] Get:129 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get:130 http://deb.debian.org/debian bookworm/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get:131 http://deb.debian.org/debian bookworm/main amd64 xfonts-utils amd64 1:7.7+6 [93.0 kB] Get:132 http://deb.debian.org/debian bookworm/main amd64 fonts-urw-base35 all 20200910-7 [10.8 MB] Get:133 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get:134 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get:135 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:136 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2+deb12u2 [292 kB] Get:137 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2+deb12u2 [760 kB] Get:138 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get:139 http://deb.debian.org/debian bookworm/main amd64 libxft2 amd64 2.3.6-1 [61.8 kB] Get:140 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:141 http://deb.debian.org/debian bookworm/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get:142 http://deb.debian.org/debian bookworm/main amd64 libtk8.6 amd64 8.6.13-2 [781 kB] Get:143 http://deb.debian.org/debian bookworm/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4.1 [593 kB] Get:144 http://deb.debian.org/debian bookworm/main amd64 blt amd64 2.5.3+dfsg-4.1 [14.9 kB] Get:145 http://deb.debian.org/debian bookworm/main amd64 python3-tk amd64 3.11.2-3 [98.3 kB] Get:146 http://deb.debian.org/debian bookworm/main amd64 python3-pil.imagetk amd64 9.4.0-1.1+deb12u1 [74.2 kB] Get:147 http://deb.debian.org/debian bookworm/main amd64 libgomp1 amd64 12.2.0-14 [116 kB] Get:148 http://deb.debian.org/debian bookworm/main amd64 libimagequant0 amd64 2.17.0-1 [32.5 kB] Get:149 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get:150 http://deb.debian.org/debian bookworm/main amd64 liblcms2-2 amd64 2.14-2 [154 kB] Get:151 http://deb.debian.org/debian bookworm/main amd64 libopenjp2-7 amd64 2.5.0-2 [189 kB] Get:152 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get:153 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-2+deb12u5 [1403 kB] Get:154 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:155 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0+dfsg-3 [1945 kB] Get:156 http://deb.debian.org/debian bookworm/main amd64 libraqm0 amd64 0.7.0-4.1 [10.6 kB] Get:157 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get:158 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get:159 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.2+deb12u1 [286 kB] Get:160 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-6+deb12u2 [316 kB] Get:161 http://deb.debian.org/debian bookworm/main amd64 libwebpdemux2 amd64 1.2.4-0.2+deb12u1 [99.4 kB] Get:162 http://deb.debian.org/debian bookworm/main amd64 libwebpmux3 amd64 1.2.4-0.2+deb12u1 [109 kB] Get:163 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1+deb12u1 [296 kB] Get:164 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get:165 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:166 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:167 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.40.1-2+deb12u1 [839 kB] Get:168 http://deb.debian.org/debian bookworm/main amd64 libtirpc-common all 1.3.3+ds-1 [14.0 kB] Get:169 http://deb.debian.org/debian bookworm/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB] Get:170 http://deb.debian.org/debian bookworm/main amd64 libuuid1 amd64 2.38.1-5+deb12u3 [28.8 kB] Get:171 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6+deb12u5 [1797 kB] Get:172 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6+deb12u5 [573 kB] Get:173 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get:174 http://deb.debian.org/debian bookworm/main amd64 libquadmath0 amd64 12.2.0-14 [144 kB] Get:175 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get:176 http://deb.debian.org/debian bookworm/main amd64 libopenblas0-pthread amd64 0.3.21+ds-4 [6709 kB] Get:177 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get:178 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:179 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:180 http://deb.debian.org/debian bookworm/main amd64 fonts-lyx all 2.3.7-1 [186 kB] Get:181 http://deb.debian.org/debian bookworm/main amd64 python-matplotlib-data all 3.6.3-1 [2744 kB] Get:182 http://deb.debian.org/debian bookworm/main amd64 python3-six all 1.16.0-4 [17.5 kB] Get:183 http://deb.debian.org/debian bookworm/main amd64 python3-dateutil all 2.8.2-2 [78.3 kB] Get:184 http://deb.debian.org/debian bookworm/main amd64 python3-pyparsing all 3.0.9-1 [138 kB] Get:185 http://deb.debian.org/debian bookworm/main amd64 python3-contourpy amd64 1.0.7-1+b1 [176 kB] Get:186 http://deb.debian.org/debian bookworm/main amd64 python3-cycler all 0.11.0-1 [8020 B] Get:187 http://deb.debian.org/debian bookworm/main amd64 python3-brotli amd64 1.0.9-2+b6 [281 kB] Get:188 http://deb.debian.org/debian bookworm/main amd64 python3-decorator all 5.1.1-3 [14.9 kB] Get:189 http://deb.debian.org/debian bookworm/main amd64 libisl23 amd64 0.25-1.1 [683 kB] Get:190 http://deb.debian.org/debian bookworm/main amd64 libmpfr6 amd64 4.2.0-1 [701 kB] Get:191 http://deb.debian.org/debian bookworm/main amd64 libmpc3 amd64 1.3.1-1 [51.5 kB] Get:192 http://deb.debian.org/debian bookworm/main amd64 cpp-12 amd64 12.2.0-14 [9764 kB] Get:193 http://deb.debian.org/debian bookworm/main amd64 cpp amd64 4:12.2.0-3 [6836 B] Get:194 http://deb.debian.org/debian bookworm/main amd64 libcc1-0 amd64 12.2.0-14 [41.7 kB] Get:195 http://deb.debian.org/debian bookworm/main amd64 binutils-common amd64 2.40-2 [2487 kB] Get:196 http://deb.debian.org/debian bookworm/main amd64 libbinutils amd64 2.40-2 [572 kB] Get:197 http://deb.debian.org/debian bookworm/main amd64 libctf-nobfd0 amd64 2.40-2 [153 kB] Get:198 http://deb.debian.org/debian bookworm/main amd64 libctf0 amd64 2.40-2 [89.8 kB] Get:199 http://deb.debian.org/debian bookworm/main amd64 libgprofng0 amd64 2.40-2 [812 kB] Get:200 http://deb.debian.org/debian bookworm/main amd64 libjansson4 amd64 2.14-2 [40.8 kB] Get:201 http://deb.debian.org/debian bookworm/main amd64 binutils-x86-64-linux-gnu amd64 2.40-2 [2246 kB] Get:202 http://deb.debian.org/debian bookworm/main amd64 binutils amd64 2.40-2 [65.0 kB] Get:203 http://deb.debian.org/debian bookworm/main amd64 libitm1 amd64 12.2.0-14 [26.1 kB] Get:204 http://deb.debian.org/debian bookworm/main amd64 libatomic1 amd64 12.2.0-14 [9328 B] Get:205 http://deb.debian.org/debian bookworm/main amd64 libasan8 amd64 12.2.0-14 [2195 kB] Get:206 http://deb.debian.org/debian bookworm/main amd64 liblsan0 amd64 12.2.0-14 [969 kB] Get:207 http://deb.debian.org/debian bookworm/main amd64 libtsan2 amd64 12.2.0-14 [2196 kB] Get:208 http://deb.debian.org/debian bookworm/main amd64 libubsan1 amd64 12.2.0-14 [883 kB] Get:209 http://deb.debian.org/debian bookworm/main amd64 libgcc-12-dev amd64 12.2.0-14 [2437 kB] Get:210 http://deb.debian.org/debian bookworm/main amd64 gcc-12 amd64 12.2.0-14 [19.3 MB] Get:211 http://deb.debian.org/debian bookworm/main amd64 gcc amd64 4:12.2.0-3 [5216 B] Get:212 http://deb.debian.org/debian bookworm/main amd64 libc-dev-bin amd64 2.36-9+deb12u9 [46.7 kB] Get:213 http://deb.debian.org/debian bookworm/main amd64 linux-libc-dev amd64 6.1.123-1 [2097 kB] Get:214 http://deb.debian.org/debian bookworm/main amd64 libcrypt-dev amd64 1:4.4.33-2 [118 kB] Get:215 http://deb.debian.org/debian bookworm/main amd64 libtirpc-dev amd64 1.3.3+ds-1 [191 kB] Get:216 http://deb.debian.org/debian bookworm/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:217 http://deb.debian.org/debian bookworm/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Get:218 http://deb.debian.org/debian bookworm/main amd64 libc6-dev amd64 2.36-9+deb12u9 [1904 kB] Get:219 http://deb.debian.org/debian bookworm/main amd64 libstdc++-12-dev amd64 12.2.0-14 [2046 kB] Get:220 http://deb.debian.org/debian bookworm/main amd64 g++-12 amd64 12.2.0-14 [10.7 MB] Get:221 http://deb.debian.org/debian bookworm/main amd64 g++ amd64 4:12.2.0-3 [1356 B] Get:222 http://deb.debian.org/debian bookworm/main amd64 libopenblas0 amd64 0.3.21+ds-4 [32.6 kB] Get:223 http://deb.debian.org/debian bookworm/main amd64 libopenblas-pthread-dev amd64 0.3.21+ds-4 [4971 kB] Get:224 http://deb.debian.org/debian bookworm/main amd64 libopenblas-dev amd64 0.3.21+ds-4 [44.9 kB] Get:225 http://deb.debian.org/debian bookworm/main amd64 libboost1.74-dev amd64 1.74.0+ds1-21 [9508 kB] Get:226 http://deb.debian.org/debian bookworm/main amd64 libboost-dev amd64 1.74.0.3 [4548 B] Get:227 http://deb.debian.org/debian bookworm/main amd64 libpython3.11 amd64 3.11.2-6+deb12u5 [1988 kB] Get:228 http://deb.debian.org/debian bookworm/main amd64 libexpat1-dev amd64 2.5.0-1+deb12u1 [150 kB] Get:229 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get:230 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-dev amd64 3.11.2-6+deb12u5 [4739 kB] Get:231 http://deb.debian.org/debian bookworm/main amd64 libpython3-dev amd64 3.11.2-1+b1 [9572 B] Get:232 http://deb.debian.org/debian bookworm/main amd64 libpython3-all-dev amd64 3.11.2-1+b1 [1068 B] Get:233 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-3 [76.3 kB] Get:234 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-3 [131 kB] Get:235 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.11.2-1+b1 [1056 B] Get:236 http://deb.debian.org/debian bookworm/main amd64 python3.11-dev amd64 3.11.2-6+deb12u5 [616 kB] Get:237 http://deb.debian.org/debian bookworm/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get:238 http://deb.debian.org/debian bookworm/main amd64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get:239 http://deb.debian.org/debian bookworm/main amd64 python3-dev amd64 3.11.2-1+b1 [26.2 kB] Get:240 http://deb.debian.org/debian bookworm/main amd64 python3-all-dev amd64 3.11.2-1+b1 [1072 B] Get:241 http://deb.debian.org/debian bookworm/main amd64 libxsimd-dev amd64 8.1.0-7 [88.8 kB] Get:242 http://deb.debian.org/debian bookworm/main amd64 python3-gast all 0.5.2-2 [9364 B] Get:243 http://deb.debian.org/debian bookworm/main amd64 python3-beniget all 0.4.1-3 [9920 B] Get:244 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB] Get:245 http://deb.debian.org/debian bookworm/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB] Get:246 http://deb.debian.org/debian bookworm/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [28.9 kB] Get:247 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.10.1-2 [15.2 MB] Get:248 http://deb.debian.org/debian bookworm/main amd64 python3-attr all 22.2.0-1 [65.4 kB] Get:249 http://deb.debian.org/debian bookworm/main amd64 python3-ufolib2 all 0.14.0+dfsg1-1 [34.3 kB] Get:250 http://deb.debian.org/debian bookworm/main amd64 python3-mpmath all 1.2.1-2 [418 kB] Get:251 http://deb.debian.org/debian bookworm/main amd64 python3-sympy all 1.11.1-1 [4358 kB] Get:252 http://deb.debian.org/debian bookworm/main amd64 python3-tz all 2022.7.1-4 [30.1 kB] Get:253 http://deb.debian.org/debian bookworm/main amd64 python3-appdirs all 1.4.4-3 [13.0 kB] Get:254 http://deb.debian.org/debian bookworm/main amd64 python3-fs all 2.4.16-2 [95.2 kB] Get:255 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:256 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.3~deb12u1 [687 kB] Get:257 http://deb.debian.org/debian bookworm/main amd64 libxslt1.1 amd64 1.1.35-1 [242 kB] Get:258 http://deb.debian.org/debian bookworm/main amd64 python3-lxml amd64 4.9.2-1+b1 [1194 kB] Get:259 http://deb.debian.org/debian bookworm/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b2 [25.0 kB] Get:260 http://deb.debian.org/debian bookworm/main amd64 unicode-data all 15.0.0-1 [7984 kB] Get:261 http://deb.debian.org/debian bookworm/main amd64 python3-fonttools amd64 4.38.0-1+b1 [1012 kB] Get:262 http://deb.debian.org/debian bookworm/main amd64 python3-packaging all 23.0-1 [32.5 kB] Get:263 http://deb.debian.org/debian bookworm/main amd64 libqhull-r8.0 amd64 2020.2-5 [248 kB] Get:264 http://deb.debian.org/debian bookworm/main amd64 python3-renderpm amd64 3.6.12-1+deb12u1 [79.0 kB] Get:265 http://deb.debian.org/debian bookworm/main amd64 python3-reportlab all 3.6.12-1+deb12u1 [565 kB] Get:266 http://deb.debian.org/debian bookworm/main amd64 sgml-base all 1.31 [15.4 kB] Get:267 http://deb.debian.org/debian bookworm/main amd64 xml-core all 0.18+nmu1 [23.8 kB] Get:268 http://deb.debian.org/debian bookworm/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get:269 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get:270 http://deb.debian.org/debian bookworm/main amd64 libpam-runtime all 1.5.2-6+deb12u1 [161 kB] Get:271 http://deb.debian.org/debian bookworm/main amd64 libacl1 amd64 2.3.1-3 [31.5 kB] Get:272 http://deb.debian.org/debian bookworm/main amd64 libattr1 amd64 1:2.5.1-4 [22.2 kB] Get:273 http://deb.debian.org/debian bookworm/main amd64 libmd0 amd64 1.0.4-2 [29.5 kB] Get:274 http://deb.debian.org/debian bookworm/main amd64 libpcre3 amd64 2:8.39-15 [341 kB] Get:275 http://deb.debian.org/debian bookworm/main amd64 mawk amd64 1.3.4.20200120-3.1 [119 kB] Get:276 http://deb.debian.org/debian bookworm/main amd64 daligner amd64 1.0+git20221215.bd26967-1 [234 kB] Get:277 http://deb.debian.org/debian bookworm/main amd64 dascrubber amd64 1.1-4 [168 kB] Get:278 http://deb.debian.org/debian bookworm/main amd64 dazzdb amd64 1.0+git20221215.aad3a46-1 [226 kB] Get:279 http://deb.debian.org/debian bookworm/main amd64 libfmt9 amd64 9.1.0+ds1-2 [113 kB] Get:280 http://deb.debian.org/debian bookworm/main amd64 python3-colorama all 0.4.6-2 [36.8 kB] Get:281 http://deb.debian.org/debian bookworm/main amd64 python3-colorlog all 6.7.0-1 [26.5 kB] Get:282 http://deb.debian.org/debian bookworm/main amd64 python3-ptyprocess all 0.7.0-5 [14.7 kB] Get:283 http://deb.debian.org/debian bookworm/main amd64 python3-pexpect all 4.8.0-4 [52.9 kB] Get:284 http://deb.debian.org/debian bookworm/main amd64 python3-easydev all 0.12.0+dfsg-4 [35.0 kB] Get:285 http://deb.debian.org/debian bookworm/main amd64 python3-colormap all 1.0.4-3 [15.4 kB] Get:286 http://deb.debian.org/debian bookworm/main amd64 python3-pbcore all 2.1.2+dfsg-5 [2830 kB] Get:287 http://deb.debian.org/debian bookworm/main amd64 python3-networkx all 2.8.8-1 [1425 kB] Get:288 http://deb.debian.org/debian bookworm/main amd64 hinge amd64 0.5.0-7+b1 [506 kB] Get:289 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get:290 http://deb.debian.org/debian bookworm/main amd64 libss2 amd64 1.47.0-2 [24.5 kB] Get:291 http://deb.debian.org/debian bookworm/main amd64 mailcap all 3.70+nmu1 [32.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 240 MB in 1s (189 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13518 files and directories currently installed.) Preparing to unpack .../base-files_12.4+deb12u9_amd64.deb ... Unpacking base-files (12.4+deb12u9) over (11.1+deb11u11) ... Setting up base-files (12.4+deb12u9) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13518 files and directories currently installed.) Preparing to unpack .../libc6_2.36-9+deb12u9_amd64.deb ... Unpacking libc6:amd64 (2.36-9+deb12u9) over (2.31-13+deb11u11) ... Setting up libc6:amd64 (2.36-9+deb12u9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13501 files and directories currently installed.) Preparing to unpack .../libc-bin_2.36-9+deb12u9_amd64.deb ... Unpacking libc-bin (2.36-9+deb12u9) over (2.31-13+deb11u11) ... Setting up libc-bin (2.36-9+deb12u9) ... Selecting previously unselected package gcc-12-base:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13501 files and directories currently installed.) Preparing to unpack .../gcc-12-base_12.2.0-14_amd64.deb ... Unpacking gcc-12-base:amd64 (12.2.0-14) ... Setting up gcc-12-base:amd64 (12.2.0-14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13506 files and directories currently installed.) Preparing to unpack .../libgcc-s1_12.2.0-14_amd64.deb ... Unpacking libgcc-s1:amd64 (12.2.0-14) over (10.2.1-6) ... Setting up libgcc-s1:amd64 (12.2.0-14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13506 files and directories currently installed.) Preparing to unpack .../debianutils_5.7-0.5~deb12u1_amd64.deb ... Unpacking debianutils (5.7-0.5~deb12u1) over (4.11.2) ... Setting up debianutils (5.7-0.5~deb12u1) ... update-alternatives: using /usr/bin/which.debianutils to provide /usr/bin/which (which) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13509 files and directories currently installed.) Preparing to unpack .../bash_5.2.15-2+b7_amd64.deb ... Unpacking bash (5.2.15-2+b7) over (5.1-2+deb11u1) ... Setting up bash (5.2.15-2+b7) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13511 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.38.1-5+deb12u3_amd64.deb ... Unpacking bsdutils (1:2.38.1-5+deb12u3) over (1:2.36.1-8+deb11u2) ... Setting up bsdutils (1:2.38.1-5+deb12u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13511 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.2.1+dfsg1-1.1_amd64.deb ... Unpacking libgmp10:amd64 (2:6.2.1+dfsg1-1.1) over (2:6.2.1+dfsg-1+deb11u1) ... Setting up libgmp10:amd64 (2:6.2.1+dfsg1-1.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13511 files and directories currently installed.) Preparing to unpack .../coreutils_9.1-1_amd64.deb ... Unpacking coreutils (9.1-1) over (8.32-4+b1) ... Setting up coreutils (9.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13510 files and directories currently installed.) Preparing to unpack .../liblzma5_5.4.1-0.2_amd64.deb ... Unpacking liblzma5:amd64 (5.4.1-0.2) over (5.2.5-2.1~deb11u1) ... Setting up liblzma5:amd64 (5.4.1-0.2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13510 files and directories currently installed.) Preparing to unpack .../libzstd1_1.5.4+dfsg2-5_amd64.deb ... Unpacking libzstd1:amd64 (1.5.4+dfsg2-5) over (1.4.8+dfsg-2.1) ... Setting up libzstd1:amd64 (1.5.4+dfsg2-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13510 files and directories currently installed.) Preparing to unpack .../tar_1.34+dfsg-1.2+deb12u1_amd64.deb ... Unpacking tar (1.34+dfsg-1.2+deb12u1) over (1.34+dfsg-1+deb11u1) ... Setting up tar (1.34+dfsg-1.2+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13510 files and directories currently installed.) Preparing to unpack .../dpkg_1.21.22_amd64.deb ... Unpacking dpkg (1.21.22) over (1.20.13) ... Setting up dpkg (1.21.22) ... Installing new version of config file /etc/cron.daily/dpkg ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13514 files and directories currently installed.) Preparing to unpack .../dash_0.5.12-2_amd64.deb ... Unpacking dash (0.5.12-2) over (0.5.11+git20200708+dd9ef66-5) ... Setting up dash (0.5.12-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13515 files and directories currently installed.) Preparing to unpack .../diffutils_1%3a3.8-4_amd64.deb ... Unpacking diffutils (1:3.8-4) over (1:3.7-5) ... Setting up diffutils (1:3.8-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13515 files and directories currently installed.) Preparing to unpack .../findutils_4.9.0-4_amd64.deb ... Unpacking findutils (4.9.0-4) over (4.8.0-1) ... Setting up findutils (4.9.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13515 files and directories currently installed.) Preparing to unpack .../archives/grep_3.8-5_amd64.deb ... Unpacking grep (3.8-5) over (3.6-1+deb11u1) ... Setting up grep (3.8-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13517 files and directories currently installed.) Preparing to unpack .../archives/gzip_1.12-1_amd64.deb ... Unpacking gzip (1.12-1) over (1.10-4+deb11u1) ... Setting up gzip (1.12-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13517 files and directories currently installed.) Preparing to unpack .../hostname_3.23+nmu1_amd64.deb ... Unpacking hostname (3.23+nmu1) over (3.23) ... Setting up hostname (3.23+nmu1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13517 files and directories currently installed.) Preparing to unpack .../login_1%3a4.13+dfsg1-1+b1_amd64.deb ... Unpacking login (1:4.13+dfsg1-1+b1) over (1:4.8.1-1) ... Setting up login (1:4.13+dfsg1-1+b1) ... Installing new version of config file /etc/login.defs ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13531 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.4-4_amd64.deb ... Unpacking libncursesw6:amd64 (6.4-4) over (6.2+20201114-2+deb11u2) ... Preparing to unpack .../libtinfo6_6.4-4_amd64.deb ... Unpacking libtinfo6:amd64 (6.4-4) over (6.2+20201114-2+deb11u2) ... Setting up libtinfo6:amd64 (6.4-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13529 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.4-4_amd64.deb ... Unpacking ncurses-bin (6.4-4) over (6.2+20201114-2+deb11u2) ... Setting up ncurses-bin (6.4-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13529 files and directories currently installed.) Preparing to unpack .../perl_5.36.0-7+deb12u1_amd64.deb ... Unpacking perl (5.36.0-7+deb12u1) over (5.32.1-4+deb11u3) ... Selecting previously unselected package perl-modules-5.36. Preparing to unpack .../perl-modules-5.36_5.36.0-7+deb12u1_all.deb ... Unpacking perl-modules-5.36 (5.36.0-7+deb12u1) ... Preparing to unpack .../libgdbm6_1.23-3_amd64.deb ... Unpacking libgdbm6:amd64 (1.23-3) over (1.19-2) ... Selecting previously unselected package libperl5.36:amd64. Preparing to unpack .../libperl5.36_5.36.0-7+deb12u1_amd64.deb ... Unpacking libperl5.36:amd64 (5.36.0-7+deb12u1) ... Preparing to unpack .../perl-base_5.36.0-7+deb12u1_amd64.deb ... Unpacking perl-base (5.36.0-7+deb12u1) over (5.32.1-4+deb11u3) ... Setting up perl-base (5.36.0-7+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15456 files and directories currently installed.) Preparing to unpack .../libbz2-1.0_1.0.8-5+b1_amd64.deb ... Unpacking libbz2-1.0:amd64 (1.0.8-5+b1) over (1.0.8-4) ... Setting up libbz2-1.0:amd64 (1.0.8-5+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15457 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a3.0.9-1_all.deb ... Unpacking libaudit-common (1:3.0.9-1) over (1:3.0-2) ... Setting up libaudit-common (1:3.0.9-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15457 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.8.3-1+b3_amd64.deb ... Unpacking libcap-ng0:amd64 (0.8.3-1+b3) over (0.7.9-2.2+b1) ... Setting up libcap-ng0:amd64 (0.8.3-1+b3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15459 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a3.0.9-1_amd64.deb ... Unpacking libaudit1:amd64 (1:3.0.9-1) over (1:3.0-2) ... Setting up libaudit1:amd64 (1:3.0.9-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15459 files and directories currently installed.) Preparing to unpack .../debconf_1.5.82_all.deb ... Unpacking debconf (1.5.82) over (1.5.77) ... Setting up debconf (1.5.82) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15458 files and directories currently installed.) Preparing to unpack .../libpam0g_1.5.2-6+deb12u1_amd64.deb ... Unpacking libpam0g:amd64 (1.5.2-6+deb12u1) over (1.4.0-9+deb11u1) ... Setting up libpam0g:amd64 (1.5.2-6+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15458 files and directories currently installed.) Preparing to unpack .../libcrypt1_1%3a4.4.33-2_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.4.33-2) over (1:4.4.18-4) ... Setting up libcrypt1:amd64 (1:4.4.33-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15458 files and directories currently installed.) Preparing to unpack .../libdb5.3_5.3.28+dfsg2-1_amd64.deb ... Unpacking libdb5.3:amd64 (5.3.28+dfsg2-1) over (5.3.28+dfsg1-0.8) ... Setting up libdb5.3:amd64 (5.3.28+dfsg2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15458 files and directories currently installed.) Preparing to unpack .../libgdbm-compat4_1.23-3_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.23-3) over (1.19-2) ... Preparing to unpack .../zlib1g_1%3a1.2.13.dfsg-1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.13.dfsg-1) over (1:1.2.11.dfsg-2+deb11u2) ... Setting up zlib1g:amd64 (1:1.2.13.dfsg-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15458 files and directories currently installed.) Preparing to unpack .../archives/sed_4.9-1_amd64.deb ... Unpacking sed (4.9-1) over (4.7-1) ... Setting up sed (4.9-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15459 files and directories currently installed.) Preparing to unpack .../libblkid1_2.38.1-5+deb12u3_amd64.deb ... Unpacking libblkid1:amd64 (2.38.1-5+deb12u3) over (2.36.1-8+deb11u2) ... Setting up libblkid1:amd64 (2.38.1-5+deb12u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15460 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.42-1_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.42-1) over (10.36-2+deb11u1) ... Setting up libpcre2-8-0:amd64 (10.42-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15460 files and directories currently installed.) Preparing to unpack .../libselinux1_3.4-1+b6_amd64.deb ... Unpacking libselinux1:amd64 (3.4-1+b6) over (3.1-3) ... Setting up libselinux1:amd64 (3.4-1+b6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15461 files and directories currently installed.) Preparing to unpack .../libmount1_2.38.1-5+deb12u3_amd64.deb ... Unpacking libmount1:amd64 (2.38.1-5+deb12u3) over (2.36.1-8+deb11u2) ... Setting up libmount1:amd64 (2.38.1-5+deb12u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15462 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.38.1-5+deb12u3_amd64.deb ... Unpacking libsmartcols1:amd64 (2.38.1-5+deb12u3) over (2.36.1-8+deb11u2) ... Setting up libsmartcols1:amd64 (2.38.1-5+deb12u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15463 files and directories currently installed.) Preparing to unpack .../util-linux_2.38.1-5+deb12u3_amd64.deb ... Unpacking util-linux (2.38.1-5+deb12u3) over (2.36.1-8+deb11u2) ... dpkg: warning: unable to delete old directory '/usr/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/usr/lib/udev': Directory not empty dpkg: warning: unable to delete old directory '/etc/init.d': Directory not empty Selecting previously unselected package util-linux-extra. Preparing to unpack .../util-linux-extra_2.38.1-5+deb12u3_amd64.deb ... Unpacking util-linux-extra (2.38.1-5+deb12u3) ... Setting up util-linux-extra (2.38.1-5+deb12u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15473 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.46-1_amd64.deb ... Unpacking libgpg-error0:amd64 (1.46-1) over (1.38-2) ... Setting up libgpg-error0:amd64 (1.46-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15473 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.10.1-3_amd64.deb ... Unpacking libgcrypt20:amd64 (1.10.1-3) over (1.8.7-6) ... Setting up libgcrypt20:amd64 (1.10.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15475 files and directories currently installed.) Preparing to unpack .../libstdc++6_12.2.0-14_amd64.deb ... Unpacking libstdc++6:amd64 (12.2.0-14) over (10.2.1-6) ... Setting up libstdc++6:amd64 (12.2.0-14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15475 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.9.4-1_amd64.deb ... Unpacking liblz4-1:amd64 (1.9.4-1) over (1.9.3-2) ... Setting up liblz4-1:amd64 (1.9.4-1) ... Selecting previously unselected package libcap2:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15475 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.66-4_amd64.deb ... Unpacking libcap2:amd64 (1:2.66-4) ... Setting up libcap2:amd64 (1:2.66-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15483 files and directories currently installed.) Preparing to unpack .../libsystemd0_252.33-1~deb12u1_amd64.deb ... Unpacking libsystemd0:amd64 (252.33-1~deb12u1) over (247.3-7+deb11u5) ... Setting up libsystemd0:amd64 (252.33-1~deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15484 files and directories currently installed.) Preparing to unpack .../libudev1_252.33-1~deb12u1_amd64.deb ... Unpacking libudev1:amd64 (252.33-1~deb12u1) over (247.3-7+deb11u5) ... Setting up libudev1:amd64 (252.33-1~deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15485 files and directories currently installed.) Preparing to unpack .../libxxhash0_0.8.1-1_amd64.deb ... Unpacking libxxhash0:amd64 (0.8.1-1) over (0.8.0-2) ... Setting up libxxhash0:amd64 (0.8.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15485 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.6.1_amd64.deb ... Unpacking libapt-pkg6.0:amd64 (2.6.1) over (2.2.4) ... Setting up libapt-pkg6.0:amd64 (2.6.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15485 files and directories currently installed.) Preparing to unpack .../libnettle8_3.8.1-2_amd64.deb ... Unpacking libnettle8:amd64 (3.8.1-2) over (3.7.3-1) ... Setting up libnettle8:amd64 (3.8.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15485 files and directories currently installed.) Preparing to unpack .../libhogweed6_3.8.1-2_amd64.deb ... Unpacking libhogweed6:amd64 (3.8.1-2) over (3.7.3-1) ... Setting up libhogweed6:amd64 (3.8.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15485 files and directories currently installed.) Preparing to unpack .../libunistring2_1.0-2_amd64.deb ... Unpacking libunistring2:amd64 (1.0-2) over (0.9.10-4) ... Setting up libunistring2:amd64 (1.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15485 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.3-1+b1_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.3-1+b1) over (2.3.0-5) ... Setting up libidn2-0:amd64 (2.3.3-1+b1) ... Selecting previously unselected package libffi8:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15487 files and directories currently installed.) Preparing to unpack .../libffi8_3.4.4-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.4-1) ... Setting up libffi8:amd64 (3.4.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15492 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.24.1-2_amd64.deb ... Unpacking libp11-kit0:amd64 (0.24.1-2) over (0.23.22-1) ... Setting up libp11-kit0:amd64 (0.24.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15492 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.19.0-2_amd64.deb ... Unpacking libtasn1-6:amd64 (4.19.0-2) over (4.16.0-2+deb11u1) ... Setting up libtasn1-6:amd64 (4.19.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15492 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.7.9-2+deb12u3_amd64.deb ... Unpacking libgnutls30:amd64 (3.7.9-2+deb12u3) over (3.7.1-5+deb11u5) ... Setting up libgnutls30:amd64 (3.7.9-2+deb12u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15494 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.4-1_all.deb ... Unpacking libsemanage-common (3.4-1) over (3.1-1) ... Setting up libsemanage-common (3.4-1) ... Installing new version of config file /etc/selinux/semanage.conf ... Selecting previously unselected package libsepol2:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15494 files and directories currently installed.) Preparing to unpack .../libsepol2_3.4-2.1_amd64.deb ... Unpacking libsepol2:amd64 (3.4-2.1) ... Setting up libsepol2:amd64 (3.4-2.1) ... Selecting previously unselected package libsemanage2:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15498 files and directories currently installed.) Preparing to unpack .../libsemanage2_3.4-1+b5_amd64.deb ... Unpacking libsemanage2:amd64 (3.4-1+b5) ... Setting up libsemanage2:amd64 (3.4-1+b5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15503 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.13+dfsg1-1+b1_amd64.deb ... Unpacking passwd (1:4.13+dfsg1-1+b1) over (1:4.8.1-1) ... Setting up passwd (1:4.13+dfsg1-1+b1) ... Installing new version of config file /etc/default/useradd ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15538 files and directories currently installed.) Removing libsemanage1:amd64 (3.1-1+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15533 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.5.2-6+deb12u1_amd64.deb ... Unpacking libpam-modules-bin (1.5.2-6+deb12u1) over (1.4.0-9+deb11u1) ... Replacing files in old package libpam-modules:amd64 (1.4.0-9+deb11u1) ... Setting up libpam-modules-bin (1.5.2-6+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15540 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.5.2-6+deb12u1_amd64.deb ... Unpacking libpam-modules:amd64 (1.5.2-6+deb12u1) over (1.4.0-9+deb11u1) ... Setting up libpam-modules:amd64 (1.5.2-6+deb12u1) ... Installing new version of config file /etc/security/limits.conf ... Installing new version of config file /etc/security/sepermit.conf ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15541 files and directories currently installed.) Preparing to unpack .../archives/adduser_3.134_all.deb ... moving unchanged adduser.conf to adduser.conf.update-old. New dpkg-conffile will come from the package. Unpacking adduser (3.134) over (3.118+deb11u1) ... Setting up adduser (3.134) ... Installing new version of config file /etc/deluser.conf ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15509 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.40-1.1_amd64.deb ... Unpacking gpgv (2.2.40-1.1) over (2.2.27-2+deb11u2) ... Setting up gpgv (2.2.40-1.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15509 files and directories currently installed.) Preparing to unpack .../debian-archive-keyring_2023.3+deb12u1_all.deb ... Unpacking debian-archive-keyring (2023.3+deb12u1) over (2021.1.1+deb11u1) ... Setting up debian-archive-keyring (2023.3+deb12u1) ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-buster-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-buster-security-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-buster-stable.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bullseye-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bullseye-security-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bullseye-stable.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bookworm-stable.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bookworm-security-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bookworm-automatic.gpg ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15509 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.5.4-1+deb12u1_amd64.deb ... Unpacking libseccomp2:amd64 (2.5.4-1+deb12u1) over (2.5.1-1+deb11u1) ... Setting up libseccomp2:amd64 (2.5.4-1+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15509 files and directories currently installed.) Preparing to unpack .../archives/apt_2.6.1_amd64.deb ... Unpacking apt (2.6.1) over (2.2.4) ... Setting up apt (2.6.1) ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... Installing new version of config file /etc/cron.daily/apt-compat ... Removing obsolete conffile /etc/kernel/postinst.d/apt-auto-removal ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15506 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.270_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.270) over (0.260) ... Setting up libdebconfclient0:amd64 (0.270) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15506 files and directories currently installed.) Preparing to unpack .../base-passwd_3.6.1_amd64.deb ... Unpacking base-passwd (3.6.1) over (3.5.51) ... Setting up base-passwd (3.6.1) ... Selecting previously unselected package libnumber-compare-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15506 files and directories currently installed.) Preparing to unpack .../libnumber-compare-perl_0.03-3_all.deb ... Unpacking libnumber-compare-perl (0.03-3) ... Setting up libnumber-compare-perl (0.03-3) ... Selecting previously unselected package libtext-glob-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15513 files and directories currently installed.) Preparing to unpack .../libtext-glob-perl_0.11-3_all.deb ... Unpacking libtext-glob-perl (0.11-3) ... Setting up libtext-glob-perl (0.11-3) ... Selecting previously unselected package libfile-find-rule-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15520 files and directories currently installed.) Preparing to unpack .../libfile-find-rule-perl_0.34-3_all.deb ... Unpacking libfile-find-rule-perl (0.34-3) ... Setting up perl-modules-5.36 (5.36.0-7+deb12u1) ... Setting up libgdbm6:amd64 (1.23-3) ... Setting up libgdbm-compat4:amd64 (1.23-3) ... Setting up libperl5.36:amd64 (5.36.0-7+deb12u1) ... Setting up perl (5.36.0-7+deb12u1) ... Setting up libfile-find-rule-perl (0.34-3) ... Selecting previously unselected package usrmerge. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15535 files and directories currently installed.) Preparing to unpack .../usrmerge_37~deb12u1_all.deb ... Unpacking usrmerge (37~deb12u1) ... Setting up usrmerge (37~deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15542 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.65.2_all.deb ... Unpacking init-system-helpers (1.65.2) over (1.60) ... Setting up init-system-helpers (1.65.2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15542 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.4-4_all.deb ... Unpacking ncurses-base (6.4-4) over (6.2+20201114-2+deb11u2) ... Setting up ncurses-base (6.4-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15544 files and directories currently installed.) Preparing to unpack .../archives/lsb-base_11.6_all.deb ... Unpacking lsb-base (11.6) over (11.1.0) ... Preparing to unpack .../sysvinit-utils_3.06-4_amd64.deb ... Unpacking sysvinit-utils (3.06-4) over (2.96-7+deb11u1) ... Setting up sysvinit-utils (3.06-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15543 files and directories currently installed.) Preparing to unpack .../logsave_1.47.0-2_amd64.deb ... Unpacking logsave (1.47.0-2) over (1.46.2-2) ... Preparing to unpack .../libext2fs2_1.47.0-2_amd64.deb ... Unpacking libext2fs2:amd64 (1.47.0-2) over (1.46.2-2) ... Setting up libext2fs2:amd64 (1.47.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15543 files and directories currently installed.) Preparing to unpack .../00-e2fsprogs_1.47.0-2_amd64.deb ... Unpacking e2fsprogs (1.47.0-2) over (1.46.2-2) ... Preparing to unpack .../01-mount_2.38.1-5+deb12u3_amd64.deb ... Unpacking mount (2.38.1-5+deb12u3) over (2.36.1-8+deb11u2) ... Selecting previously unselected package libssl3:amd64. Preparing to unpack .../02-libssl3_3.0.15-1~deb12u1_amd64.deb ... Unpacking libssl3:amd64 (3.0.15-1~deb12u1) ... Selecting previously unselected package libpython3.11-minimal:amd64. Preparing to unpack .../03-libpython3.11-minimal_3.11.2-6+deb12u5_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.2-6+deb12u5) ... Preparing to unpack .../04-libexpat1_2.5.0-1+deb12u1_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-1+deb12u1) over (2.2.10-2+deb11u5) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../05-python3.11-minimal_3.11.2-6+deb12u5_amd64.deb ... Unpacking python3.11-minimal (3.11.2-6+deb12u5) ... Preparing to unpack .../06-python3-ujson_5.7.0-1_amd64.deb ... Unpacking python3-ujson:amd64 (5.7.0-1) over (4.0.2-1) ... Preparing to unpack .../07-python3-reportlab-accel_3.6.12-1+deb12u1_amd64.deb ... Unpacking python3-reportlab-accel:amd64 (3.6.12-1+deb12u1) over (3.5.59-2) ... Preparing to unpack .../08-libhts3_1.16+ds-3_amd64.deb ... Unpacking libhts3:amd64 (1.16+ds-3) over (1.11-4) ... Preparing to unpack .../09-python3-pysam_0.20.0+ds-3+b1_amd64.deb ... Unpacking python3-pysam (0.20.0+ds-3+b1) over (0.15.4+ds-3+b2) ... Preparing to unpack .../10-python3-pil_9.4.0-1.1+deb12u1_amd64.deb ... Unpacking python3-pil:amd64 (9.4.0-1.1+deb12u1) over (8.1.2+dfsg-0.3+deb11u2) ... Preparing to unpack .../11-python3-numpy_1%3a1.24.2-1+deb12u1_amd64.deb ... Unpacking python3-numpy (1:1.24.2-1+deb12u1) over (1:1.19.5-1) ... Preparing to unpack .../12-python3-matplotlib_3.6.3-1+b1_amd64.deb ... Unpacking python3-matplotlib (3.6.3-1+b1) over (3.3.4-1) ... Preparing to unpack .../13-python3-kiwisolver_1.4.4-1+b1_amd64.deb ... Unpacking python3-kiwisolver (1.4.4-1+b1) over (1.3.1-1+b1) ... Preparing to unpack .../14-python3-biopython_1.80+dfsg-4+b1_amd64.deb ... Unpacking python3-biopython (1.80+dfsg-4+b1) over (1.78+dfsg-4) ... Setting up libssl3:amd64 (3.0.15-1~deb12u1) ... Setting up libpython3.11-minimal:amd64 (3.11.2-6+deb12u5) ... Setting up libexpat1:amd64 (2.5.0-1+deb12u1) ... Setting up python3.11-minimal (3.11.2-6+deb12u5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16465 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.11.2-1+b1_amd64.deb ... Unpacking python3-minimal (3.11.2-1+b1) over (3.9.2-3) ... Setting up python3-minimal (3.11.2-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16466 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.2-1+b1_amd64.deb ... Unpacking python3 (3.11.2-1+b1) over (3.9.2-3) ... Preparing to unpack .../01-libdouble-conversion3_3.2.1-1_amd64.deb ... Unpacking libdouble-conversion3:amd64 (3.2.1-1) over (3.1.5-6.1) ... Preparing to unpack .../02-libbrotli1_1.0.9-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b6) over (1.0.9-2+b2) ... Preparing to unpack .../03-libgssapi-krb5-2_1.20.1-2+deb12u2_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-2+deb12u2) over (1.18.3-6+deb11u5) ... Preparing to unpack .../04-libkrb5-3_1.20.1-2+deb12u2_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-2+deb12u2) over (1.18.3-6+deb11u5) ... Preparing to unpack .../05-libk5crypto3_1.20.1-2+deb12u2_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-2+deb12u2) over (1.18.3-6+deb11u5) ... Preparing to unpack .../06-libkrb5support0_1.20.1-2+deb12u2_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-2+deb12u2) over (1.18.3-6+deb11u5) ... Preparing to unpack .../07-libcom-err2_1.47.0-2_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.0-2) over (1.46.2-2) ... Preparing to unpack .../08-libkeyutils1_1.6.3-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-2) over (1.6.1-2) ... Preparing to unpack .../09-libsasl2-modules-db_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg-10) over (2.1.27+dfsg-2.1+deb11u1) ... Preparing to unpack .../10-libsasl2-2_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg-10) over (2.1.27+dfsg-2.1+deb11u1) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../11-libldap-2.5-0_2.5.13+dfsg-5_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Preparing to unpack .../12-libnghttp2-14_1.52.0-1+deb12u2_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.52.0-1+deb12u2) over (1.43.0-1+deb11u1) ... Preparing to unpack .../13-libpsl5_0.21.2-1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.2-1) over (0.21.0-1.2) ... Preparing to unpack .../14-libssh2-1_1.10.0-3+b1_amd64.deb ... Unpacking libssh2-1:amd64 (1.10.0-3+b1) over (1.9.0-2+deb11u1) ... Preparing to unpack .../15-libcurl3-gnutls_7.88.1-10+deb12u8_amd64.deb ... Unpacking libcurl3-gnutls:amd64 (7.88.1-10+deb12u8) over (7.74.0-1.3+deb11u13) ... Preparing to unpack .../16-libdeflate0_1.14-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.14-1) over (1.7-1) ... Selecting previously unselected package libhtscodecs2:amd64. Preparing to unpack .../17-libhtscodecs2_1.3.0-4_amd64.deb ... Unpacking libhtscodecs2:amd64 (1.3.0-4) ... Preparing to unpack .../18-tzdata_2024b-0+deb12u1_all.deb ... Unpacking tzdata (2024b-0+deb12u1) over (2024a-0+deb11u1) ... Selecting previously unselected package libtcl8.6:amd64. Preparing to unpack .../19-libtcl8.6_8.6.13+dfsg-2_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ... Preparing to unpack .../20-libpng16-16_1.6.39-2_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.39-2) over (1.6.37-3) ... Preparing to unpack .../21-libfreetype6_2.12.1+dfsg-5+deb12u3_amd64.deb ... Unpacking libfreetype6:amd64 (2.12.1+dfsg-5+deb12u3) over (2.10.4+dfsg-1+deb11u1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../22-fonts-dejavu-core_2.37-6_all.deb ... Unpacking fonts-dejavu-core (2.37-6) ... Preparing to unpack .../23-ttf-bitstream-vera_1.10-8.2_all.deb ... Unpacking ttf-bitstream-vera (1.10-8.2) over (1.10-8.1) ... Selecting previously unselected package libfontenc1:amd64. Preparing to unpack .../24-libfontenc1_1%3a1.1.4-1_amd64.deb ... Unpacking libfontenc1:amd64 (1:1.1.4-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../25-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../26-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../27-xfonts-utils_1%3a7.7+6_amd64.deb ... Unpacking xfonts-utils (1:7.7+6) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../28-fonts-urw-base35_20200910-7_all.deb ... Unpacking fonts-urw-base35 (20200910-7) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../29-fontconfig-config_2.14.1-4_amd64.deb ... Unpacking fontconfig-config (2.14.1-4) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../30-libfontconfig1_2.14.1-4_amd64.deb ... Unpacking libfontconfig1:amd64 (2.14.1-4) ... Preparing to unpack .../31-libxcb1_1.15-1_amd64.deb ... Unpacking libxcb1:amd64 (1.15-1) over (1.14-3) ... Selecting previously unselected package libx11-data. Preparing to unpack .../32-libx11-data_2%3a1.8.4-2+deb12u2_all.deb ... Unpacking libx11-data (2:1.8.4-2+deb12u2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../33-libx11-6_2%3a1.8.4-2+deb12u2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.4-2+deb12u2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../34-libxrender1_1%3a0.9.10-1.1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../35-libxft2_2.3.6-1_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../36-libxext6_2%3a1.3.4-1+b1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b1) ... Selecting previously unselected package libxss1:amd64. Preparing to unpack .../37-libxss1_1%3a1.2.3-1_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:amd64. Preparing to unpack .../38-libtk8.6_8.6.13-2_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.13-2) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../39-tk8.6-blt2.5_2.5.3+dfsg-4.1_amd64.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Selecting previously unselected package blt. Preparing to unpack .../40-blt_2.5.3+dfsg-4.1_amd64.deb ... Unpacking blt (2.5.3+dfsg-4.1) ... Selecting previously unselected package python3-tk:amd64. Preparing to unpack .../41-python3-tk_3.11.2-3_amd64.deb ... Unpacking python3-tk:amd64 (3.11.2-3) ... Selecting previously unselected package python3-pil.imagetk:amd64. Preparing to unpack .../42-python3-pil.imagetk_9.4.0-1.1+deb12u1_amd64.deb ... Unpacking python3-pil.imagetk:amd64 (9.4.0-1.1+deb12u1) ... Preparing to unpack .../43-libgomp1_12.2.0-14_amd64.deb ... Unpacking libgomp1:amd64 (12.2.0-14) over (10.2.1-6) ... Preparing to unpack .../44-libimagequant0_2.17.0-1_amd64.deb ... Unpacking libimagequant0:amd64 (2.17.0-1) over (2.12.2-1.1) ... Preparing to unpack .../45-libjpeg62-turbo_1%3a2.1.5-2_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-2) over (1:2.0.6-4) ... Preparing to unpack .../46-liblcms2-2_2.14-2_amd64.deb ... Unpacking liblcms2-2:amd64 (2.14-2) over (2.12~rc1-2) ... Selecting previously unselected package libopenjp2-7:amd64. Preparing to unpack .../47-libopenjp2-7_2.5.0-2_amd64.deb ... Unpacking libopenjp2-7:amd64 (2.5.0-2) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../48-libfribidi0_1.0.8-2.1_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.8-2.1) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../49-libglib2.0-0_2.74.6-2+deb12u5_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.74.6-2+deb12u5) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../50-libgraphite2-3_1.3.14-1_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-1) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../51-libharfbuzz0b_6.0.0+dfsg-3_amd64.deb ... Unpacking libharfbuzz0b:amd64 (6.0.0+dfsg-3) ... Selecting previously unselected package libraqm0:amd64. Preparing to unpack .../52-libraqm0_0.7.0-4.1_amd64.deb ... Unpacking libraqm0:amd64 (0.7.0-4.1) ... Preparing to unpack .../53-libjbig0_2.1-6.1_amd64.deb ... Unpacking libjbig0:amd64 (2.1-6.1) over (2.1-3.1+b2) ... Selecting previously unselected package liblerc4:amd64. Preparing to unpack .../54-liblerc4_4.0.0+ds-2_amd64.deb ... Unpacking liblerc4:amd64 (4.0.0+ds-2) ... Selecting previously unselected package libwebp7:amd64. Preparing to unpack .../55-libwebp7_1.2.4-0.2+deb12u1_amd64.deb ... Unpacking libwebp7:amd64 (1.2.4-0.2+deb12u1) ... Selecting previously unselected package libtiff6:amd64. Preparing to unpack .../56-libtiff6_4.5.0-6+deb12u2_amd64.deb ... Unpacking libtiff6:amd64 (4.5.0-6+deb12u2) ... Preparing to unpack .../57-libwebpdemux2_1.2.4-0.2+deb12u1_amd64.deb ... Unpacking libwebpdemux2:amd64 (1.2.4-0.2+deb12u1) over (0.6.1-2.1+deb11u2) ... Preparing to unpack .../58-libwebpmux3_1.2.4-0.2+deb12u1_amd64.deb ... Unpacking libwebpmux3:amd64 (1.2.4-0.2+deb12u1) over (0.6.1-2.1+deb11u2) ... Preparing to unpack .../59-python3-pkg-resources_66.1.1-1+deb12u1_all.deb ... Unpacking python3-pkg-resources (66.1.1-1+deb12u1) over (52.0.0-4) ... Preparing to unpack .../60-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) over (4.0.0) ... Preparing to unpack .../61-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) over (8.1-1) ... Preparing to unpack .../62-libreadline8_8.2-1.3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-1.3) over (8.1-1) ... Preparing to unpack .../63-libsqlite3-0_3.40.1-2+deb12u1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.40.1-2+deb12u1) over (3.34.1-3) ... Preparing to unpack .../64-libtirpc-common_1.3.3+ds-1_all.deb ... Unpacking libtirpc-common (1.3.3+ds-1) over (1.3.1-1+deb11u1) ... Preparing to unpack .../65-libtirpc3_1.3.3+ds-1_amd64.deb ... Unpacking libtirpc3:amd64 (1.3.3+ds-1) over (1.3.1-1+deb11u1) ... Preparing to unpack .../66-libuuid1_2.38.1-5+deb12u3_amd64.deb ... Unpacking libuuid1:amd64 (2.38.1-5+deb12u3) over (2.36.1-8+deb11u2) ... Setting up libuuid1:amd64 (2.38.1-5+deb12u3) ... Selecting previously unselected package libpython3.11-stdlib:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17180 files and directories currently installed.) Preparing to unpack .../00-libpython3.11-stdlib_3.11.2-6+deb12u5_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.2-6+deb12u5) ... Selecting previously unselected package python3.11. Preparing to unpack .../01-python3.11_3.11.2-6+deb12u5_amd64.deb ... Unpacking python3.11 (3.11.2-6+deb12u5) ... Preparing to unpack .../02-libblas3_3.11.0-2_amd64.deb ... Unpacking libblas3:amd64 (3.11.0-2) over (3.9.0-3+deb11u1) ... Preparing to unpack .../03-libquadmath0_12.2.0-14_amd64.deb ... Unpacking libquadmath0:amd64 (12.2.0-14) over (10.2.1-6) ... Preparing to unpack .../04-libgfortran5_12.2.0-14_amd64.deb ... Unpacking libgfortran5:amd64 (12.2.0-14) over (10.2.1-6) ... Selecting previously unselected package libopenblas0-pthread:amd64. Preparing to unpack .../05-libopenblas0-pthread_0.3.21+ds-4_amd64.deb ... Unpacking libopenblas0-pthread:amd64 (0.3.21+ds-4) ... Preparing to unpack .../06-liblapack3_3.11.0-2_amd64.deb ... Unpacking liblapack3:amd64 (3.11.0-2) over (3.9.0-3+deb11u1) ... Preparing to unpack .../07-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) over (3.5.1+dfsg+~3.5.5-7) ... Preparing to unpack .../08-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... Unpacking libjs-jquery-ui (1.13.2+dfsg-1) over (1.12.1+dfsg-8+deb11u2) ... Preparing to unpack .../09-fonts-lyx_2.3.7-1_all.deb ... Unpacking fonts-lyx (2.3.7-1) over (2.3.6-1) ... Preparing to unpack .../10-python-matplotlib-data_3.6.3-1_all.deb ... Unpacking python-matplotlib-data (3.6.3-1) over (3.3.4-1) ... Preparing to unpack .../11-python3-six_1.16.0-4_all.deb ... Unpacking python3-six (1.16.0-4) over (1.16.0-2) ... Preparing to unpack .../12-python3-dateutil_2.8.2-2_all.deb ... Unpacking python3-dateutil (2.8.2-2) over (2.8.1-6) ... Preparing to unpack .../13-python3-pyparsing_3.0.9-1_all.deb ... Unpacking python3-pyparsing (3.0.9-1) over (2.4.7-1) ... Selecting previously unselected package python3-contourpy. Preparing to unpack .../14-python3-contourpy_1.0.7-1+b1_amd64.deb ... Unpacking python3-contourpy (1.0.7-1+b1) ... Preparing to unpack .../15-python3-cycler_0.11.0-1_all.deb ... Unpacking python3-cycler (0.11.0-1) over (0.10.0-3) ... Selecting previously unselected package python3-brotli. Preparing to unpack .../16-python3-brotli_1.0.9-2+b6_amd64.deb ... Unpacking python3-brotli (1.0.9-2+b6) ... Preparing to unpack .../17-python3-decorator_5.1.1-3_all.deb ... Unpacking python3-decorator (5.1.1-3) over (4.4.2-2) ... Selecting previously unselected package libisl23:amd64. Preparing to unpack .../18-libisl23_0.25-1.1_amd64.deb ... Unpacking libisl23:amd64 (0.25-1.1) ... Selecting previously unselected package libmpfr6:amd64. Preparing to unpack .../19-libmpfr6_4.2.0-1_amd64.deb ... Unpacking libmpfr6:amd64 (4.2.0-1) ... Selecting previously unselected package libmpc3:amd64. Preparing to unpack .../20-libmpc3_1.3.1-1_amd64.deb ... Unpacking libmpc3:amd64 (1.3.1-1) ... Selecting previously unselected package cpp-12. Preparing to unpack .../21-cpp-12_12.2.0-14_amd64.deb ... Unpacking cpp-12 (12.2.0-14) ... Selecting previously unselected package cpp. Preparing to unpack .../22-cpp_4%3a12.2.0-3_amd64.deb ... Unpacking cpp (4:12.2.0-3) ... Selecting previously unselected package libcc1-0:amd64. Preparing to unpack .../23-libcc1-0_12.2.0-14_amd64.deb ... Unpacking libcc1-0:amd64 (12.2.0-14) ... Selecting previously unselected package binutils-common:amd64. Preparing to unpack .../24-binutils-common_2.40-2_amd64.deb ... Unpacking binutils-common:amd64 (2.40-2) ... Selecting previously unselected package libbinutils:amd64. Preparing to unpack .../25-libbinutils_2.40-2_amd64.deb ... Unpacking libbinutils:amd64 (2.40-2) ... Selecting previously unselected package libctf-nobfd0:amd64. Preparing to unpack .../26-libctf-nobfd0_2.40-2_amd64.deb ... Unpacking libctf-nobfd0:amd64 (2.40-2) ... Selecting previously unselected package libctf0:amd64. Preparing to unpack .../27-libctf0_2.40-2_amd64.deb ... Unpacking libctf0:amd64 (2.40-2) ... Selecting previously unselected package libgprofng0:amd64. Preparing to unpack .../28-libgprofng0_2.40-2_amd64.deb ... Unpacking libgprofng0:amd64 (2.40-2) ... Selecting previously unselected package libjansson4:amd64. Preparing to unpack .../29-libjansson4_2.14-2_amd64.deb ... Unpacking libjansson4:amd64 (2.14-2) ... Selecting previously unselected package binutils-x86-64-linux-gnu. Preparing to unpack .../30-binutils-x86-64-linux-gnu_2.40-2_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.40-2) ... Selecting previously unselected package binutils. Preparing to unpack .../31-binutils_2.40-2_amd64.deb ... Unpacking binutils (2.40-2) ... Selecting previously unselected package libitm1:amd64. Preparing to unpack .../32-libitm1_12.2.0-14_amd64.deb ... Unpacking libitm1:amd64 (12.2.0-14) ... Selecting previously unselected package libatomic1:amd64. Preparing to unpack .../33-libatomic1_12.2.0-14_amd64.deb ... Unpacking libatomic1:amd64 (12.2.0-14) ... Selecting previously unselected package libasan8:amd64. Preparing to unpack .../34-libasan8_12.2.0-14_amd64.deb ... Unpacking libasan8:amd64 (12.2.0-14) ... Selecting previously unselected package liblsan0:amd64. Preparing to unpack .../35-liblsan0_12.2.0-14_amd64.deb ... Unpacking liblsan0:amd64 (12.2.0-14) ... Selecting previously unselected package libtsan2:amd64. Preparing to unpack .../36-libtsan2_12.2.0-14_amd64.deb ... Unpacking libtsan2:amd64 (12.2.0-14) ... Selecting previously unselected package libubsan1:amd64. Preparing to unpack .../37-libubsan1_12.2.0-14_amd64.deb ... Unpacking libubsan1:amd64 (12.2.0-14) ... Selecting previously unselected package libgcc-12-dev:amd64. Preparing to unpack .../38-libgcc-12-dev_12.2.0-14_amd64.deb ... Unpacking libgcc-12-dev:amd64 (12.2.0-14) ... Selecting previously unselected package gcc-12. Preparing to unpack .../39-gcc-12_12.2.0-14_amd64.deb ... Unpacking gcc-12 (12.2.0-14) ... Selecting previously unselected package gcc. Preparing to unpack .../40-gcc_4%3a12.2.0-3_amd64.deb ... Unpacking gcc (4:12.2.0-3) ... Selecting previously unselected package libc-dev-bin. Preparing to unpack .../41-libc-dev-bin_2.36-9+deb12u9_amd64.deb ... Unpacking libc-dev-bin (2.36-9+deb12u9) ... Selecting previously unselected package linux-libc-dev:amd64. Preparing to unpack .../42-linux-libc-dev_6.1.123-1_amd64.deb ... Unpacking linux-libc-dev:amd64 (6.1.123-1) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../43-libcrypt-dev_1%3a4.4.33-2_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.33-2) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../44-libtirpc-dev_1.3.3+ds-1_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.3+ds-1) ... Selecting previously unselected package libnsl-dev:amd64. Preparing to unpack .../45-libnsl-dev_1.3.0-2_amd64.deb ... Unpacking libnsl-dev:amd64 (1.3.0-2) ... Selecting previously unselected package rpcsvc-proto. Preparing to unpack .../46-rpcsvc-proto_1.4.3-1_amd64.deb ... Unpacking rpcsvc-proto (1.4.3-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../47-libc6-dev_2.36-9+deb12u9_amd64.deb ... Unpacking libc6-dev:amd64 (2.36-9+deb12u9) ... Selecting previously unselected package libstdc++-12-dev:amd64. Preparing to unpack .../48-libstdc++-12-dev_12.2.0-14_amd64.deb ... Unpacking libstdc++-12-dev:amd64 (12.2.0-14) ... Selecting previously unselected package g++-12. Preparing to unpack .../49-g++-12_12.2.0-14_amd64.deb ... Unpacking g++-12 (12.2.0-14) ... Selecting previously unselected package g++. Preparing to unpack .../50-g++_4%3a12.2.0-3_amd64.deb ... Unpacking g++ (4:12.2.0-3) ... Selecting previously unselected package libopenblas0:amd64. Preparing to unpack .../51-libopenblas0_0.3.21+ds-4_amd64.deb ... Unpacking libopenblas0:amd64 (0.3.21+ds-4) ... Selecting previously unselected package libopenblas-pthread-dev:amd64. Preparing to unpack .../52-libopenblas-pthread-dev_0.3.21+ds-4_amd64.deb ... Unpacking libopenblas-pthread-dev:amd64 (0.3.21+ds-4) ... Selecting previously unselected package libopenblas-dev:amd64. Preparing to unpack .../53-libopenblas-dev_0.3.21+ds-4_amd64.deb ... Unpacking libopenblas-dev:amd64 (0.3.21+ds-4) ... Selecting previously unselected package libboost1.74-dev:amd64. Preparing to unpack .../54-libboost1.74-dev_1.74.0+ds1-21_amd64.deb ... Unpacking libboost1.74-dev:amd64 (1.74.0+ds1-21) ... Selecting previously unselected package libboost-dev:amd64. Preparing to unpack .../55-libboost-dev_1.74.0.3_amd64.deb ... Unpacking libboost-dev:amd64 (1.74.0.3) ... Selecting previously unselected package libpython3.11:amd64. Preparing to unpack .../56-libpython3.11_3.11.2-6+deb12u5_amd64.deb ... Unpacking libpython3.11:amd64 (3.11.2-6+deb12u5) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../57-libexpat1-dev_2.5.0-1+deb12u1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.5.0-1+deb12u1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../58-zlib1g-dev_1%3a1.2.13.dfsg-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Selecting previously unselected package libpython3.11-dev:amd64. Preparing to unpack .../59-libpython3.11-dev_3.11.2-6+deb12u5_amd64.deb ... Unpacking libpython3.11-dev:amd64 (3.11.2-6+deb12u5) ... Selecting previously unselected package libpython3-dev:amd64. Preparing to unpack .../60-libpython3-dev_3.11.2-1+b1_amd64.deb ... Unpacking libpython3-dev:amd64 (3.11.2-1+b1) ... Selecting previously unselected package libpython3-all-dev:amd64. Preparing to unpack .../61-libpython3-all-dev_3.11.2-1+b1_amd64.deb ... Unpacking libpython3-all-dev:amd64 (3.11.2-1+b1) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../62-python3-lib2to3_3.11.2-3_all.deb ... Unpacking python3-lib2to3 (3.11.2-3) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../63-python3-distutils_3.11.2-3_all.deb ... Unpacking python3-distutils (3.11.2-3) ... Selecting previously unselected package python3-all. Preparing to unpack .../64-python3-all_3.11.2-1+b1_amd64.deb ... Unpacking python3-all (3.11.2-1+b1) ... Selecting previously unselected package python3.11-dev. Preparing to unpack .../65-python3.11-dev_3.11.2-6+deb12u5_amd64.deb ... Unpacking python3.11-dev (3.11.2-6+deb12u5) ... Selecting previously unselected package libjs-underscore. Preparing to unpack .../66-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../67-libjs-sphinxdoc_5.3.0-4_all.deb ... Unpacking libjs-sphinxdoc (5.3.0-4) ... Selecting previously unselected package python3-dev. Preparing to unpack .../68-python3-dev_3.11.2-1+b1_amd64.deb ... Unpacking python3-dev (3.11.2-1+b1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../69-python3-all-dev_3.11.2-1+b1_amd64.deb ... Unpacking python3-all-dev (3.11.2-1+b1) ... Selecting previously unselected package libxsimd-dev:amd64. Preparing to unpack .../70-libxsimd-dev_8.1.0-7_amd64.deb ... Unpacking libxsimd-dev:amd64 (8.1.0-7) ... Selecting previously unselected package python3-gast. Preparing to unpack .../71-python3-gast_0.5.2-2_all.deb ... Unpacking python3-gast (0.5.2-2) ... Selecting previously unselected package python3-beniget. Preparing to unpack .../72-python3-beniget_0.4.1-3_all.deb ... Unpacking python3-beniget (0.4.1-3) ... Selecting previously unselected package python3-ply. Preparing to unpack .../73-python3-ply_3.11-5_all.deb ... Unpacking python3-ply (3.11-5) ... Selecting previously unselected package python3-pythran. Preparing to unpack .../74-python3-pythran_0.11.0+ds-7_amd64.deb ... Unpacking python3-pythran (0.11.0+ds-7) ... Selecting previously unselected package liblbfgsb0:amd64. Preparing to unpack .../75-liblbfgsb0_3.0+dfsg.4-1_amd64.deb ... Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../76-python3-scipy_1.10.1-2_amd64.deb ... Unpacking python3-scipy (1.10.1-2) ... Selecting previously unselected package python3-attr. Preparing to unpack .../77-python3-attr_22.2.0-1_all.deb ... Unpacking python3-attr (22.2.0-1) ... Selecting previously unselected package python3-ufolib2. Preparing to unpack .../78-python3-ufolib2_0.14.0+dfsg1-1_all.deb ... Unpacking python3-ufolib2 (0.14.0+dfsg1-1) ... Selecting previously unselected package python3-mpmath. Preparing to unpack .../79-python3-mpmath_1.2.1-2_all.deb ... Unpacking python3-mpmath (1.2.1-2) ... Selecting previously unselected package python3-sympy. Preparing to unpack .../80-python3-sympy_1.11.1-1_all.deb ... Unpacking python3-sympy (1.11.1-1) ... Selecting previously unselected package python3-tz. Preparing to unpack .../81-python3-tz_2022.7.1-4_all.deb ... Unpacking python3-tz (2022.7.1-4) ... Preparing to unpack .../82-python3-appdirs_1.4.4-3_all.deb ... Unpacking python3-appdirs (1.4.4-3) over (1.4.4-1) ... Selecting previously unselected package python3-fs. Preparing to unpack .../83-python3-fs_2.4.16-2_all.deb ... Unpacking python3-fs (2.4.16-2) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../84-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../85-libxml2_2.9.14+dfsg-1.3~deb12u1_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... Selecting previously unselected package libxslt1.1:amd64. Preparing to unpack .../86-libxslt1.1_1.1.35-1_amd64.deb ... Unpacking libxslt1.1:amd64 (1.1.35-1) ... Selecting previously unselected package python3-lxml:amd64. Preparing to unpack .../87-python3-lxml_4.9.2-1+b1_amd64.deb ... Unpacking python3-lxml:amd64 (4.9.2-1+b1) ... Selecting previously unselected package python3-lz4. Preparing to unpack .../88-python3-lz4_4.0.2+dfsg-1+b2_amd64.deb ... Unpacking python3-lz4 (4.0.2+dfsg-1+b2) ... Selecting previously unselected package unicode-data. Preparing to unpack .../89-unicode-data_15.0.0-1_all.deb ... Unpacking unicode-data (15.0.0-1) ... Selecting previously unselected package python3-fonttools. Preparing to unpack .../90-python3-fonttools_4.38.0-1+b1_amd64.deb ... Unpacking python3-fonttools (4.38.0-1+b1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../91-python3-packaging_23.0-1_all.deb ... Unpacking python3-packaging (23.0-1) ... Selecting previously unselected package libqhull-r8.0:amd64. Preparing to unpack .../92-libqhull-r8.0_2020.2-5_amd64.deb ... Unpacking libqhull-r8.0:amd64 (2020.2-5) ... Selecting previously unselected package python3-renderpm:amd64. Preparing to unpack .../93-python3-renderpm_3.6.12-1+deb12u1_amd64.deb ... Unpacking python3-renderpm:amd64 (3.6.12-1+deb12u1) ... Preparing to unpack .../94-python3-reportlab_3.6.12-1+deb12u1_all.deb ... Unpacking python3-reportlab (3.6.12-1+deb12u1) over (3.5.59-2) ... Selecting previously unselected package sgml-base. Preparing to unpack .../95-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package xml-core. Preparing to unpack .../96-xml-core_0.18+nmu1_all.deb ... Unpacking xml-core (0.18+nmu1) ... Selecting previously unselected package w3c-sgml-lib. Preparing to unpack .../97-w3c-sgml-lib_1.3-3_all.deb ... Unpacking w3c-sgml-lib (1.3-3) ... Preparing to unpack .../98-libpython3-stdlib_3.11.2-1+b1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.2-1+b1) over (3.9.2-3) ... Preparing to unpack .../99-libpam-runtime_1.5.2-6+deb12u1_all.deb ... Unpacking libpam-runtime (1.5.2-6+deb12u1) over (1.4.0-9+deb11u1) ... Setting up libpam-runtime (1.5.2-6+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43385 files and directories currently installed.) Preparing to unpack .../libacl1_2.3.1-3_amd64.deb ... Unpacking libacl1:amd64 (2.3.1-3) over (2.2.53-10) ... Setting up libacl1:amd64 (2.3.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43386 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.5.1-4_amd64.deb ... Unpacking libattr1:amd64 (1:2.5.1-4) over (1:2.4.48-6) ... Setting up libattr1:amd64 (1:2.5.1-4) ... Installing new version of config file /etc/xattr.conf ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43387 files and directories currently installed.) Preparing to unpack .../libmd0_1.0.4-2_amd64.deb ... Unpacking libmd0:amd64 (1.0.4-2) over (1.0.3-3) ... Setting up libmd0:amd64 (1.0.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43387 files and directories currently installed.) Preparing to unpack .../libpcre3_2%3a8.39-15_amd64.deb ... Unpacking libpcre3:amd64 (2:8.39-15) over (2:8.39-13) ... Setting up libpcre3:amd64 (2:8.39-15) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43387 files and directories currently installed.) Preparing to unpack .../00-mawk_1.3.4.20200120-3.1_amd64.deb ... Unpacking mawk (1.3.4.20200120-3.1) over (1.3.4.20200120-2) ... Preparing to unpack .../01-daligner_1.0+git20221215.bd26967-1_amd64.deb ... Unpacking daligner (1.0+git20221215.bd26967-1) over (1.0+git20200727.ed40ce5-3) ... Preparing to unpack .../02-dascrubber_1.1-4_amd64.deb ... Unpacking dascrubber (1.1-4) over (1.1-2) ... Preparing to unpack .../03-dazzdb_1.0+git20221215.aad3a46-1_amd64.deb ... Unpacking dazzdb (1.0+git20221215.aad3a46-1) over (1.0+git20201103.8d98c37-1+deb11u1) ... Selecting previously unselected package libfmt9:amd64. Preparing to unpack .../04-libfmt9_9.1.0+ds1-2_amd64.deb ... Unpacking libfmt9:amd64 (9.1.0+ds1-2) ... Preparing to unpack .../05-python3-colorama_0.4.6-2_all.deb ... Unpacking python3-colorama (0.4.6-2) over (0.4.4-1) ... Preparing to unpack .../06-python3-colorlog_6.7.0-1_all.deb ... Unpacking python3-colorlog (6.7.0-1) over (4.7.2-1) ... Preparing to unpack .../07-python3-ptyprocess_0.7.0-5_all.deb ... Unpacking python3-ptyprocess (0.7.0-5) over (0.7.0-1) ... Preparing to unpack .../08-python3-pexpect_4.8.0-4_all.deb ... Unpacking python3-pexpect (4.8.0-4) over (4.8.0-2) ... Preparing to unpack .../09-python3-easydev_0.12.0+dfsg-4_all.deb ... Unpacking python3-easydev (0.12.0+dfsg-4) over (0.10.1+dfsg-1) ... Preparing to unpack .../10-python3-colormap_1.0.4-3_all.deb ... Unpacking python3-colormap (1.0.4-3) over (1.0.3-1) ... Preparing to unpack .../11-python3-pbcore_2.1.2+dfsg-5_all.deb ... Unpacking python3-pbcore (2.1.2+dfsg-5) over (1.7.1+git20200430.a127b1e+dfsg-1) ... Preparing to unpack .../12-python3-networkx_2.8.8-1_all.deb ... Unpacking python3-networkx (2.8.8-1) over (2.5+ds-2) ... Preparing to unpack .../13-hinge_0.5.0-7+b1_amd64.deb ... Unpacking hinge (0.5.0-7+b1) over (0.5.0-6+b2) ... Preparing to unpack .../14-libbsd0_0.11.7-2_amd64.deb ... Unpacking libbsd0:amd64 (0.11.7-2) over (0.11.3-1+deb11u1) ... Preparing to unpack .../15-libss2_1.47.0-2_amd64.deb ... Unpacking libss2:amd64 (1.47.0-2) over (1.46.2-2) ... Preparing to unpack .../16-mailcap_3.70+nmu1_all.deb ... Unpacking mailcap (3.70+nmu1) over (3.69) ... Setting up libhtscodecs2:amd64 (1.3.0-4) ... Setting up media-types (10.0.0) ... Installing new version of config file /etc/mime.types ... Setting up libgraphite2-3:amd64 (1.3.14-1) ... Setting up liblcms2-2:amd64 (2.14-2) ... Setting up lsb-base (11.6) ... Setting up libdouble-conversion3:amd64 (3.2.1-1) ... Setting up libkeyutils1:amd64 (1.6.3-2) ... Setting up libpsl5:amd64 (0.21.2-1) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up ttf-bitstream-vera (1.10-8.2) ... Setting up libicu72:amd64 (72.1-3) ... Setting up liblerc4:amd64 (4.0.0+ds-2) ... Setting up libglib2.0-0:amd64 (2.74.6-2+deb12u5) ... No schema files found: doing nothing. Setting up dascrubber (1.1-4) ... Setting up fontconfig-config (2.14.1-4) ... Setting up libtirpc-common (1.3.3+ds-1) ... Setting up fonts-lyx (2.3.7-1) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up libsqlite3-0:amd64 (3.40.1-2+deb12u1) ... Setting up binutils-common:amd64 (2.40-2) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libnghttp2-14:amd64 (1.52.0-1+deb12u2) ... Setting up libdeflate0:amd64 (1.14-1) ... Setting up linux-libc-dev:amd64 (6.1.123-1) ... Setting up libctf-nobfd0:amd64 (2.40-2) ... Setting up libqhull-r8.0:amd64 (2020.2-5) ... Setting up libcom-err2:amd64 (1.47.0-2) ... Setting up libgomp1:amd64 (12.2.0-14) ... Setting up libjbig0:amd64 (2.1-6.1) ... Setting up libjansson4:amd64 (2.14-2) ... Setting up libkrb5support0:amd64 (1.20.1-2+deb12u2) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Setting up tzdata (2024b-0+deb12u1) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Feb 9 16:37:17 UTC 2025. Universal Time is now: Sun Feb 9 16:37:17 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.0.0-1) ... Setting up dazzdb (1.0+git20221215.aad3a46-1) ... Setting up libxsimd-dev:amd64 (8.1.0-7) ... Setting up libfontenc1:amd64 (1:1.1.4-1) ... Setting up libblas3:amd64 (3.11.0-2) ... Setting up rpcsvc-proto (1.4.3-1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-2) ... Setting up libx11-data (2:1.8.4-2+deb12u2) ... Setting up libmpfr6:amd64 (4.2.0-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:amd64 (1.0.8-2.1) ... Setting up libquadmath0:amd64 (12.2.0-14) ... Setting up libimagequant0:amd64 (2.17.0-1) ... Setting up libpng16-16:amd64 (1.6.39-2) ... Setting up libmpc3:amd64 (1.3.1-1) ... Setting up libatomic1:amd64 (12.2.0-14) ... Setting up libss2:amd64 (1.47.0-2) ... Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ... Setting up fonts-dejavu-core (2.37-6) ... Setting up util-linux (2.38.1-5+deb12u3) ... Setting up libncursesw6:amd64 (6.4-4) ... Setting up libk5crypto3:amd64 (1.20.1-2+deb12u2) ... Setting up logsave (1.47.0-2) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libgfortran5:amd64 (12.2.0-14) ... Setting up libwebp7:amd64 (1.2.4-0.2+deb12u1) ... Setting up libfmt9:amd64 (9.1.0+ds1-2) ... Setting up libubsan1:amd64 (12.2.0-14) ... Setting up mount (2.38.1-5+deb12u3) ... Setting up libcrypt-dev:amd64 (1:4.4.33-2) ... Setting up libtiff6:amd64 (4.5.0-6+deb12u2) ... Setting up libasan8:amd64 (12.2.0-14) ... Setting up daligner (1.0+git20221215.bd26967-1) ... Setting up libopenjp2-7:amd64 (2.5.0-2) ... Setting up libx11-6:amd64 (2:1.8.4-2+deb12u2) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up sgml-base (1.31) ... Setting up mawk (1.3.4.20200120-3.1) ... Setting up libkrb5-3:amd64 (1.20.1-2+deb12u2) ... Setting up libtsan2:amd64 (12.2.0-14) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libbinutils:amd64 (2.40-2) ... Setting up libisl23:amd64 (0.25-1.1) ... Setting up libc-dev-bin (2.36-9+deb12u9) ... Setting up python-matplotlib-data (3.6.3-1) ... Installing new version of config file /etc/matplotlibrc ... Setting up libwebpmux3:amd64 (1.2.4-0.2+deb12u1) ... Setting up libbsd0:amd64 (0.11.7-2) ... Setting up mailcap (3.70+nmu1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... Setting up libcc1-0:amd64 (12.2.0-14) ... Setting up liblsan0:amd64 (12.2.0-14) ... Setting up libitm1:amd64 (12.2.0-14) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libctf0:amd64 (2.40-2) ... Setting up liblapack3:amd64 (3.11.0-2) ... Setting up cpp-12 (12.2.0-14) ... Setting up libopenblas0-pthread:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libwebpdemux2:amd64 (1.2.4-0.2+deb12u1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up e2fsprogs (1.47.0-2) ... Installing new version of config file /etc/mke2fs.conf ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up libgprofng0:amd64 (2.40-2) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:amd64 (2.12.1+dfsg-5+deb12u3) ... Setting up libgcc-12-dev:amd64 (12.2.0-14) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-2+deb12u2) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up libopenblas0:amd64 (0.3.21+ds-4) ... Setting up cpp (4:12.2.0-3) ... Setting up xml-core (0.18+nmu1) ... Setting up libxslt1.1:amd64 (1.1.35-1) ... Setting up libharfbuzz0b:amd64 (6.0.0+dfsg-3) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libfontconfig1:amd64 (2.14.1-4) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1) ... Setting up binutils-x86-64-linux-gnu (2.40-2) ... Setting up libopenblas-pthread-dev:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode Setting up libtirpc3:amd64 (1.3.3+ds-1) ... Setting up libxft2:amd64 (2.3.6-1) ... Setting up libpython3.11-stdlib:amd64 (3.11.2-6+deb12u5) ... Setting up libtk8.6:amd64 (8.6.13-2) ... Setting up libcurl3-gnutls:amd64 (7.88.1-10+deb12u8) ... Setting up binutils (2.40-2) ... Setting up xfonts-utils (1:7.7+6) ... Setting up libopenblas-dev:amd64 (0.3.21+ds-4) ... Setting up libtirpc-dev:amd64 (1.3.3+ds-1) ... Setting up gcc-12 (12.2.0-14) ... Setting up libraqm0:amd64 (0.7.0-4.1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.36-9+deb12u9) ... Setting up libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up python3.11 (3.11.2-6+deb12u5) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Setting up libhts3:amd64 (1.16+ds-3) ... Setting up libpython3.11:amd64 (3.11.2-6+deb12u5) ... Setting up libstdc++-12-dev:amd64 (12.2.0-14) ... Setting up blt (2.5.3+dfsg-4.1) ... Setting up python3 (3.11.2-1+b1) ... Setting up fonts-urw-base35 (20200910-7) ... Setting up python3-ujson:amd64 (5.7.0-1) ... Setting up python3-tz (2022.7.1-4) ... Setting up gcc (4:12.2.0-3) ... Setting up python3-six (1.16.0-4) ... Setting up python3-pil:amd64 (9.4.0-1.1+deb12u1) ... Setting up python3-decorator (5.1.1-3) ... Setting up python3-packaging (23.0-1) ... Setting up libexpat1-dev:amd64 (2.5.0-1+deb12u1) ... Setting up python3-pyparsing (3.0.9-1) ... Setting up python3-brotli (1.0.9-2+b6) ... Setting up python3-cycler (0.11.0-1) ... Setting up python3-reportlab-accel:amd64 (3.6.12-1+deb12u1) ... Setting up python3-kiwisolver (1.4.4-1+b1) ... Setting up python3-reportlab (3.6.12-1+deb12u1) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up python3-lxml:amd64 (4.9.2-1+b1) ... Setting up python3-dateutil (2.8.2-2) ... Setting up python3-mpmath (1.2.1-2) ... Setting up python3-lib2to3 (3.11.2-3) ... Setting up python3-appdirs (1.4.4-3) ... Setting up python3-ptyprocess (0.7.0-5) ... Setting up g++-12 (12.2.0-14) ... Setting up python3-pkg-resources (66.1.1-1+deb12u1) ... Setting up python3-distutils (3.11.2-3) ... Setting up python3-sympy (1.11.1-1) ... Setting up python3-attr (22.2.0-1) ... Setting up libboost1.74-dev:amd64 (1.74.0+ds1-21) ... Setting up python3-pysam (0.20.0+ds-3+b1) ... Setting up python3-renderpm:amd64 (3.6.12-1+deb12u1) ... Setting up python3-colorama (0.4.6-2) ... Setting up python3-colorlog (6.7.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b2) ... Setting up python3-ply (3.11-5) ... Setting up python3-gast (0.5.2-2) ... Setting up python3-all (3.11.2-1+b1) ... Setting up python3-tk:amd64 (3.11.2-3) ... Setting up python3-networkx (2.8.8-1) ... Setting up python3-fs (2.4.16-2) ... Setting up python3-beniget (0.4.1-3) ... Setting up python3-pil.imagetk:amd64 (9.4.0-1.1+deb12u1) ... Setting up libpython3.11-dev:amd64 (3.11.2-6+deb12u5) ... Setting up python3-pexpect (4.8.0-4) ... Setting up python3-numpy (1:1.24.2-1+deb12u1) ... Setting up g++ (4:12.2.0-3) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up python3-contourpy (1.0.7-1+b1) ... Setting up libboost-dev:amd64 (1.74.0.3) ... Setting up libpython3-dev:amd64 (3.11.2-1+b1) ... Setting up python3.11-dev (3.11.2-6+deb12u5) ... Setting up python3-easydev (0.12.0+dfsg-4) ... Setting up libpython3-all-dev:amd64 (3.11.2-1+b1) ... Setting up python3-dev (3.11.2-1+b1) ... Setting up python3-all-dev (3.11.2-1+b1) ... Setting up python3-pythran (0.11.0+ds-7) ... Setting up python3-scipy (1.10.1-2) ... Setting up python3-fonttools (4.38.0-1+b1) ... Setting up python3-ufolib2 (0.14.0+dfsg1-1) ... Setting up python3-matplotlib (3.6.3-1+b1) ... Setting up python3-colormap (1.0.4-3) ... Processing triggers for debianutils (5.7-0.5~deb12u1) ... Processing triggers for libc-bin (2.36-9+deb12u9) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.80+dfsg-4+b1) ... Setting up python3-pbcore (2.1.2+dfsg-5) ... Setting up hinge (0.5.0-7+b1) ... 1m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-yf', 'dist-upgrade'] 1m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m1.8s DUMP: 148e5e53bdc890e1f1a69323d75c2dbe - 1m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'show', '--no-all-versions', 'hinge'] 1m1.9s DUMP: Package: hinge Source: hinge (0.5.0-7) Version: 0.5.0-7+b1 Installed-Size: 3312 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libfmt9 (>= 9.0.0+ds1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 11), zlib1g (>= 1:1.1.4), python3, daligner, dazzdb, dascrubber, python3-numpy, python3-ujson, python3-colormap, python3-pbcore, python3-networkx, python3-matplotlib Description-en: long read genome assembler based on hinging HINGE is a genome assembler that seeks to achieve optimal repeat resolution by distinguishing repeats that can be resolved given the data from those that cannot. This is accomplished by adding ??hinges?? to reads for constructing an overlap graph where only unresolvable repeats are merged. As a result, HINGE combines the error resilience of overlap-based assemblers with repeat-resolution capabilities of de Bruijn graph assemblers. Description-md5: 796f6bb30e0dd11acb73bb5eeeaf4c08 Homepage: https://github.com/HingeAssembler/HINGE Section: science Priority: optional Filename: pool/main/h/hinge/hinge_0.5.0-7+b1_amd64.deb Size: 505728 MD5sum: 9b89d01939bf5489ba786271aec9c03c SHA256: 940548451cd461bdf2b0c520e85b5e9def9d7faa05bd1c1a2bddd0585dc54525 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'show', '--no-all-versions', 'hinge'] 1m1.9s INFO: apt-cache knows about the following packages: hinge 1m1.9s INFO: Running scripts pre_install 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_database-server'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_database-server'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_exceptions'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_exceptions'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_extras'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_extras'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy'] 1m1.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release v=12.9,o=Debian,a=stable,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy', 'hinge'] 1m1.9s DUMP: hinge: Installed: 0.5.0-7+b1 Candidate: 0.5.0-7+b1 Version table: *** 0.5.0-7+b1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 100 /var/lib/dpkg/status 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy', 'hinge'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-y', 'install', 'hinge'] 1m2.1s DUMP: Reading package lists... Building dependency tree... Reading state information... hinge is already the newest version (0.5.0-7+b1). The following packages were automatically installed and are no longer required: libfmt7 libldap-2.4-2 libmpdec3 libperl5.32 libpython3.9-minimal libpython3.9-stdlib libtiff5 libwebp6 perl-modules-5.32 python3.9 python3.9-minimal Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-y', 'install', 'hinge'] 1m2.1s INFO: Running scripts post_install 1m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_install_exceptions'] 1m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_install_exceptions'] 1m2.1s INFO: Running scripts post_distupgrade 1m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_exceptions'] 1m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_exceptions'] 1m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_zz_backports'] 1m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_zz_backports'] 1m2.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 1m3.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 1m3.5s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpuk_9m0zi to testing 1m3.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 1m3.5s INFO: Running scripts pre_distupgrade 1m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 1m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 1m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_exceptions'] 1m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_exceptions'] 1m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 1m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 1m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_database-server'] 1m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_database-server'] 1m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 1m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 1m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', 'update'] 1m5.2s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [175 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9405 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6304 kB] Fetched 15.9 MB in 1s (12.6 MB/s) Reading package lists... 1m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', 'update'] 1m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-yf', 'dist-upgrade'] 1m59.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libboost-dev libboost1.83-dev libfile-find-rule-perl libfmt7 libfmt9 libldap-2.4-2 libldap-2.5-0 libmpdec3 libnsl-dev libnumber-compare-perl libopenblas-dev libopenblas-pthread-dev libopenblas0 libperl5.32 libperl5.36 libpython3-all-dev libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.12-dev libpython3.12t64 libpython3.9-minimal libpython3.9-stdlib libtext-glob-perl libtiff5 libtirpc-dev libwebp6 libxsimd-dev perl-modules-5.32 perl-modules-5.36 python3-all-dev python3-appdirs python3-beniget python3-colorama python3-colorlog python3-easydev python3-gast python3-lib2to3 python3-line-profiler python3-pexpect python3-ply python3-ptyprocess python3-pythran python3-six python3.11 python3.11-dev python3.11-minimal python3.12-dev python3.9 python3.9-minimal ttf-bitstream-vera usrmerge xtl-dev Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libapt-pkg6.0 libboost1.74-dev libcurl3-gnutls libdb5.3 libext2fs2 libgdbm-compat4 libgdbm6 libglib2.0-0 libgnutls30 libhogweed6 libhts3 libnettle8 libpng16-16 libpsl5 libreadline8 libssh2-1 libssl3 libtirpc3 python3-distutils python3-renderpm python3-reportlab-accel The following NEW packages will be installed: cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu fonts-dejavu-mono g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-14 gcc-14-base gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu libapt-pkg6.0t64 libboost1.83-dev libcairo2 libcurl3t64-gnutls libdb5.3t64 libext2fs2t64 libfmt10 libgcc-14-dev libgdbm-compat4t64 libgdbm6t64 libglib2.0-0t64 libgnutls30t64 libhogweed6t64 libhts3t64 libhwasan0 libldap2 libnettle8t64 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libperl5.40 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libreadline8t64 libsframe1 libsharpyuv0 libssh2-1t64 libssl3t64 libstdc++-14-dev libtirpc3t64 libunistring5 libxcb-render0 libxcb-shm0 login.defs netbase openssl-provider-legacy perl-modules-5.40 python3-autocommand python3-cairo python3-chardet python3-freetype python3-inflect python3-jaraco.context python3-jaraco.functools python3-jaraco.text python3-line-profiler python3-more-itertools python3-platformdirs python3-rlpycairo python3-setuptools python3-typeguard python3-typing-extensions python3-zipp python3.12 python3.12-dev python3.12-minimal python3.12-tk python3.13 python3.13-dev python3.13-minimal python3.13-tk sqv xtl-dev The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-common binutils-x86-64-linux-gnu blt bsdutils coreutils cpp cpp-12 daligner dash dazzdb debconf debian-archive-keyring debianutils diffutils dpkg e2fsprogs findutils fontconfig-config fonts-dejavu-core fonts-lyx fonts-urw-base35 g++ g++-12 gcc gcc-12 gcc-12-base gpgv grep gzip hinge hostname init-system-helpers libacl1 libasan8 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblas3 libblkid1 libboost-dev libbrotli1 libbsd0 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libctf-nobfd0 libctf0 libdebconfclient0 libdeflate0 libdouble-conversion3 libexpat1 libexpat1-dev libffi8 libfontconfig1 libfontenc1 libfreetype6 libfribidi0 libgcc-12-dev libgcc-s1 libgcrypt20 libgfortran5 libgmp10 libgomp1 libgpg-error0 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhtscodecs2 libicu72 libidn2-0 libimagequant0 libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-sphinxdoc libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 liblerc4 liblsan0 liblz4-1 liblzma5 libmd0 libmount1 libmpc3 libmpfr6 libncursesw6 libnghttp2-14 libnsl-dev libnsl2 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libopenjp2-7 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libpython3-all-dev libpython3-dev libpython3-stdlib libqhull-r8.0 libquadmath0 libraqm0 librtmp1 libsasl2-2 libsasl2-modules-db libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsmartcols1 libsqlite3-0 libss2 libstdc++-12-dev libstdc++6 libsystemd0 libtasn1-6 libtcl8.6 libtiff6 libtinfo6 libtirpc-common libtirpc-dev libtk8.6 libtsan2 libubsan1 libudev1 libuuid1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxsimd-dev libxslt1.1 libxss1 libxxhash0 libzstd1 linux-libc-dev login logsave mailcap mawk media-types mount ncurses-base ncurses-bin passwd perl perl-base python-matplotlib-data python3 python3-all python3-all-dev python3-attr python3-biopython python3-brotli python3-colorama python3-colorlog python3-colormap python3-contourpy python3-cycler python3-dateutil python3-decorator python3-dev python3-easydev python3-fonttools python3-fs python3-gast python3-kiwisolver python3-lib2to3 python3-lxml python3-lz4 python3-matplotlib python3-minimal python3-mpmath python3-networkx python3-numpy python3-packaging python3-pbcore python3-pexpect python3-pil python3-pil.imagetk python3-pkg-resources python3-ply python3-ptyprocess python3-pyparsing python3-pysam python3-pythran python3-reportlab python3-scipy python3-six python3-sympy python3-tk python3-tz python3-ufolib2 python3-ujson readline-common sed sysvinit-utils tar tk8.6-blt2.5 tzdata unicode-data usrmerge util-linux util-linux-extra x11-common xfonts-utils xml-core zlib1g zlib1g-dev 246 upgraded, 83 newly installed, 21 to remove and 0 not upgraded. Need to get 331 MB of archives. After this operation, 596 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 base-files amd64 13.6 [72.8 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libnsl-dev amd64 1.3.0-3+b3 [67.5 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libcrypt-dev amd64 1:4.4.38-1 [119 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libc6-dev amd64 2.40-6 [1958 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libc-dev-bin amd64 2.40-6 [56.6 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3+b1 [190 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-4 [138 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-4 [326 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-4 [80.9 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-4 [32.8 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 libzstd1 amd64 1.5.6+dfsg-2 [300 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libc6 amd64 2.40-6 [2816 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 libc-bin amd64 2.40-6 [631 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libgmp10 amd64 2:6.3.0+dfsg-3 [560 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 gcc-14-base amd64 14.2.0-12 [48.3 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 libgcc-s1 amd64 14.2.0-12 [72.7 kB] Get:22 http://deb.debian.org/debian trixie/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 libnettle8t64 amd64 3.10-1+b1 [305 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 libhogweed6t64 amd64 3.10-1+b1 [335 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 libgnutls30t64 amd64 3.8.8-2 [1454 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 libsystemd0 amd64 257.2-3 [450 kB] Get:28 http://deb.debian.org/debian trixie/main amd64 libpam-modules-bin amd64 1.7.0-2 [48.8 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-9 [704 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 libpam-modules amd64 1.7.0-2 [177 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8+b1 [19.9 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 openssl-provider-legacy amd64 3.4.0-2 [301 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libssl3t64 amd64 3.4.0-2 [2302 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8+b1 [57.6 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 libldap2 amd64 2.6.9+dfsg-1 [192 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 libnghttp3-9 amd64 1.6.0-2 [64.8 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 libngtcp2-16 amd64 1.9.1-1 [119 kB] Get:38 http://deb.debian.org/debian trixie/main amd64 libngtcp2-crypto-gnutls8 amd64 1.9.1-1 [18.5 kB] Get:39 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 libcurl3t64-gnutls amd64 8.11.1-1+b1 [360 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 libhts3t64 amd64 1.20+ds-2 [455 kB] Get:43 http://deb.debian.org/debian trixie/main amd64 sqv amd64 1.2.1-5 [615 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 libstdc++6 amd64 14.2.0-12 [714 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 libapt-pkg6.0t64 amd64 2.9.27 [1120 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 libxxhash0 amd64 0.8.3-2 [27.1 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 liblz4-1 amd64 1.10.0-3 [63.8 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 liblzma5 amd64 5.6.3-1+b1 [272 kB] Get:50 http://deb.debian.org/debian trixie/main amd64 libcap2 amd64 1:2.66-5+b1 [27.8 kB] Get:51 http://deb.debian.org/debian trixie/main amd64 libudev1 amd64 257.2-3 [149 kB] Get:52 http://deb.debian.org/debian trixie/main amd64 libdebconfclient0 amd64 0.277 [10.4 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 libpcre2-8-0 amd64 10.44-5 [275 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libselinux1 amd64 3.7-3.1 [76.8 kB] Get:55 http://deb.debian.org/debian trixie/main amd64 base-passwd amd64 3.6.6 [53.1 kB] Get:56 http://deb.debian.org/debian trixie/main amd64 login.defs all 1:4.16.0-7 [185 kB] Get:57 http://deb.debian.org/debian trixie/main amd64 libaudit-common all 1:4.0.2-2 [12.7 kB] Get:58 http://deb.debian.org/debian trixie/main amd64 libcap-ng0 amd64 0.8.5-4 [17.3 kB] Get:59 http://deb.debian.org/debian trixie/main amd64 libaudit1 amd64 1:4.0.2-2+b1 [55.2 kB] Get:60 http://deb.debian.org/debian trixie/main amd64 libcrypt1 amd64 1:4.4.38-1 [90.1 kB] Get:61 http://deb.debian.org/debian trixie/main amd64 perl-modules-5.40 all 5.40.0-8 [3015 kB] Get:62 http://deb.debian.org/debian trixie/main amd64 libgdbm6t64 amd64 1.24-2 [75.2 kB] Get:63 http://deb.debian.org/debian trixie/main amd64 libgdbm-compat4t64 amd64 1.24-2 [50.3 kB] Get:64 http://deb.debian.org/debian trixie/main amd64 libperl5.40 amd64 5.40.0-8 [4320 kB] Get:65 http://deb.debian.org/debian trixie/main amd64 perl amd64 5.40.0-8 [267 kB] Get:66 http://deb.debian.org/debian trixie/main amd64 perl-base amd64 5.40.0-8 [1675 kB] Get:67 http://deb.debian.org/debian trixie/main amd64 debconf all 1.5.89 [120 kB] Get:68 http://deb.debian.org/debian trixie/main amd64 libpam0g amd64 1.7.0-2 [69.8 kB] Get:69 http://deb.debian.org/debian trixie/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Get:70 http://deb.debian.org/debian trixie/main amd64 libattr1 amd64 1:2.5.2-2 [22.7 kB] Get:71 http://deb.debian.org/debian trixie/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Get:72 http://deb.debian.org/debian trixie/main amd64 libbsd0 amd64 0.12.2-2 [131 kB] Get:73 http://deb.debian.org/debian trixie/main amd64 libsemanage-common all 3.7-2.1 [7208 B] Get:74 http://deb.debian.org/debian trixie/main amd64 libsepol2 amd64 3.7-1 [293 kB] Get:75 http://deb.debian.org/debian trixie/main amd64 libsemanage2 amd64 3.7-2.1 [91.2 kB] Get:76 http://deb.debian.org/debian trixie/main amd64 passwd amd64 1:4.16.0-7 [1233 kB] Get:77 http://deb.debian.org/debian trixie/main amd64 adduser all 3.137 [140 kB] Get:78 http://deb.debian.org/debian trixie/main amd64 debian-archive-keyring all 2023.4 [161 kB] Get:79 http://deb.debian.org/debian trixie/main amd64 libseccomp2 amd64 2.5.5-2 [47.8 kB] Get:80 http://deb.debian.org/debian trixie/main amd64 apt amd64 2.9.27 [1440 kB] Get:81 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.6-1 [23.6 kB] Get:82 http://deb.debian.org/debian trixie/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get:83 http://deb.debian.org/debian trixie/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB] Get:84 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get:85 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get:86 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB] Get:87 http://deb.debian.org/debian trixie/main amd64 libhtscodecs2 amd64 1.6.1-1 [95.6 kB] Get:88 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB] Get:89 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:90 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get:91 http://deb.debian.org/debian trixie/main amd64 linux-libc-dev all 6.12.12-1 [2495 kB] Get:92 http://deb.debian.org/debian trixie/main amd64 debianutils amd64 5.21 [92.1 kB] Get:93 http://deb.debian.org/debian trixie/main amd64 bash amd64 5.2.37-1 [1501 kB] Get:94 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.4-2 [106 kB] Get:95 http://deb.debian.org/debian trixie/main amd64 usrmerge all 39+nmu2 [13.3 kB] Get:96 http://deb.debian.org/debian trixie/main amd64 coreutils amd64 9.5-1+b1 [2922 kB] Get:97 http://deb.debian.org/debian trixie/main amd64 dash amd64 0.5.12-12 [98.5 kB] Get:98 http://deb.debian.org/debian trixie/main amd64 diffutils amd64 1:3.10-2 [384 kB] Get:99 http://deb.debian.org/debian trixie/main amd64 tar amd64 1.35+dfsg-3.1 [815 kB] Get:100 http://deb.debian.org/debian trixie/main amd64 dpkg amd64 1.22.15 [1537 kB] Get:101 http://deb.debian.org/debian trixie/main amd64 findutils amd64 4.10.0-3 [700 kB] Get:102 http://deb.debian.org/debian trixie/main amd64 grep amd64 3.11-4 [431 kB] Get:103 http://deb.debian.org/debian trixie/main amd64 gzip amd64 1.13-1 [138 kB] Get:104 http://deb.debian.org/debian trixie/main amd64 hostname amd64 3.25 [11.0 kB] Get:105 http://deb.debian.org/debian trixie/main amd64 libpam-runtime all 1.7.0-2 [248 kB] Get:106 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.4-2 [88.4 kB] Get:107 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5+20250125-2 [135 kB] Get:108 http://deb.debian.org/debian trixie/main amd64 libtinfo6 amd64 6.5+20250125-2 [348 kB] Get:109 http://deb.debian.org/debian trixie/main amd64 ncurses-bin amd64 6.5+20250125-2 [438 kB] Get:110 http://deb.debian.org/debian trixie/main amd64 sed amd64 4.9-2 [329 kB] Get:111 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.4-2 [169 kB] Get:112 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.4-2 [199 kB] Get:113 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.4-2 [140 kB] Get:114 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.4-2 [36.3 kB] Get:115 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.4-2 [1213 kB] Get:116 http://deb.debian.org/debian trixie/main amd64 util-linux-extra amd64 2.40.4-2 [266 kB] Get:117 http://deb.debian.org/debian trixie/main amd64 init-system-helpers all 1.68 [38.7 kB] Get:118 http://deb.debian.org/debian trixie/main amd64 ncurses-base all 6.5+20250125-2 [273 kB] Get:119 http://deb.debian.org/debian trixie/main amd64 sysvinit-utils amd64 3.13-1 [33.2 kB] Get:120 http://deb.debian.org/debian trixie/main amd64 libgomp1 amd64 14.2.0-12 [137 kB] Get:121 http://deb.debian.org/debian trixie/main amd64 libitm1 amd64 14.2.0-12 [25.9 kB] Get:122 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14.2.0-12 [9300 B] Get:123 http://deb.debian.org/debian trixie/main amd64 libasan8 amd64 14.2.0-12 [2727 kB] Get:124 http://deb.debian.org/debian trixie/main amd64 liblsan0 amd64 14.2.0-12 [1205 kB] Get:125 http://deb.debian.org/debian trixie/main amd64 libisl23 amd64 0.27-1 [659 kB] Get:126 http://deb.debian.org/debian trixie/main amd64 libmpfr6 amd64 4.2.1-1+b2 [724 kB] Get:127 http://deb.debian.org/debian trixie/main amd64 libmpc3 amd64 1.3.1-1+b3 [52.2 kB] Get:128 http://deb.debian.org/debian trixie/main amd64 g++-12 amd64 12.4.0-4 [10.8 MB] Get:129 http://deb.debian.org/debian trixie/main amd64 gcc-12 amd64 12.4.0-4 [19.6 MB] Get:130 http://deb.debian.org/debian trixie/main amd64 cpp-12 amd64 12.4.0-4 [9885 kB] Get:131 http://deb.debian.org/debian trixie/main amd64 libubsan1 amd64 14.2.0-12 [1075 kB] Get:132 http://deb.debian.org/debian trixie/main amd64 libstdc++-12-dev amd64 12.4.0-4 [2082 kB] Get:133 http://deb.debian.org/debian trixie/main amd64 libquadmath0 amd64 14.2.0-12 [145 kB] Get:134 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-12 [836 kB] Get:135 http://deb.debian.org/debian trixie/main amd64 libcc1-0 amd64 14.2.0-12 [42.8 kB] Get:136 http://deb.debian.org/debian trixie/main amd64 libgcc-12-dev amd64 12.4.0-4 [2434 kB] Get:137 http://deb.debian.org/debian trixie/main amd64 libtsan2 amd64 14.2.0-12 [2460 kB] Get:138 http://deb.debian.org/debian trixie/main amd64 gcc-12-base amd64 12.4.0-4 [43.6 kB] Get:139 http://deb.debian.org/debian trixie/main amd64 libgprofng0 amd64 2.44-1 [808 kB] Get:140 http://deb.debian.org/debian trixie/main amd64 libctf0 amd64 2.44-1 [88.5 kB] Get:141 http://deb.debian.org/debian trixie/main amd64 libctf-nobfd0 amd64 2.44-1 [155 kB] Get:142 http://deb.debian.org/debian trixie/main amd64 libsframe1 amd64 2.44-1 [78.1 kB] Get:143 http://deb.debian.org/debian trixie/main amd64 binutils-x86-64-linux-gnu amd64 2.44-1 [1014 kB] Get:144 http://deb.debian.org/debian trixie/main amd64 binutils-common amd64 2.44-1 [2509 kB] Get:145 http://deb.debian.org/debian trixie/main amd64 binutils amd64 2.44-1 [265 kB] Get:146 http://deb.debian.org/debian trixie/main amd64 libbinutils amd64 2.44-1 [535 kB] Get:147 http://deb.debian.org/debian trixie/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Get:148 http://deb.debian.org/debian trixie/main amd64 libhwasan0 amd64 14.2.0-12 [1489 kB] Get:149 http://deb.debian.org/debian trixie/main amd64 libgcc-14-dev amd64 14.2.0-12 [2673 kB] Get:150 http://deb.debian.org/debian trixie/main amd64 libstdc++-14-dev amd64 14.2.0-12 [2372 kB] Get:151 http://deb.debian.org/debian trixie/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get:152 http://deb.debian.org/debian trixie/main amd64 libboost1.83-dev amd64 1.83.0-4 [10.6 MB] Get:153 http://deb.debian.org/debian trixie/main amd64 logsave amd64 1.47.2-1 [23.9 kB] Get:154 http://deb.debian.org/debian trixie/main amd64 libext2fs2t64 amd64 1.47.2-1 [212 kB] Get:155 http://deb.debian.org/debian trixie/main amd64 e2fsprogs amd64 1.47.2-1 [590 kB] Get:156 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 10.2.0-1 [479 kB] Get:157 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.82.4-2 [1502 kB] Get:158 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get:159 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.46-4 [284 kB] Get:160 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-6 [69.4 kB] Get:161 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get:162 http://deb.debian.org/debian trixie/main amd64 libpython3.13-minimal amd64 3.13.1-3+b1 [859 kB] Get:163 http://deb.debian.org/debian trixie/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get:164 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get:165 http://deb.debian.org/debian trixie/main amd64 python3.13-minimal amd64 3.13.1-3+b1 [2203 kB] Get:166 http://deb.debian.org/debian trixie/main amd64 python3-all-dev amd64 3.13.1-2 [1076 B] Get:167 http://deb.debian.org/debian trixie/main amd64 python3-all amd64 3.13.1-2 [1056 B] Get:168 http://deb.debian.org/debian trixie/main amd64 libpython3-all-dev amd64 3.13.1-2 [1072 B] Get:169 http://deb.debian.org/debian trixie/main amd64 libpython3-dev amd64 3.13.1-2 [10.2 kB] Get:170 http://deb.debian.org/debian trixie/main amd64 python3-dev amd64 3.13.1-2 [26.1 kB] Get:171 http://deb.debian.org/debian trixie/main amd64 python3-ujson amd64 5.10.0-1+b3 [25.5 kB] Get:172 http://deb.debian.org/debian trixie/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get:173 http://deb.debian.org/debian trixie/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get:174 http://deb.debian.org/debian trixie/main amd64 python3-tk amd64 3.13.1-1 [9464 B] Get:175 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.14.1-4 [20.5 MB] Get:176 http://deb.debian.org/debian trixie/main amd64 python3-biopython amd64 1.84+dfsg-4+b2 [1651 kB] Get:177 http://deb.debian.org/debian trixie/main amd64 python3-reportlab all 4.2.5-1 [1117 kB] Get:178 http://deb.debian.org/debian trixie/main amd64 python3-pysam amd64 0.22.1+ds-2+b2 [4412 kB] Get:179 http://deb.debian.org/debian trixie/main amd64 python3-pil.imagetk amd64 10.4.0-1.1 [79.6 kB] Get:180 http://deb.debian.org/debian trixie/main amd64 python3-pil amd64 10.4.0-1.1 [522 kB] Get:181 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-13 [4736 kB] Get:182 http://deb.debian.org/debian trixie/main amd64 python3-matplotlib amd64 3.8.3-3+b3 [5650 kB] Get:183 http://deb.debian.org/debian trixie/main amd64 python3-lz4 amd64 4.4.0+dfsg-1 [25.5 kB] Get:184 http://deb.debian.org/debian trixie/main amd64 python3-lxml amd64 5.3.0-1+b1 [1676 kB] Get:185 http://deb.debian.org/debian trixie/main amd64 python3-kiwisolver amd64 1.4.7-3 [76.9 kB] Get:186 http://deb.debian.org/debian trixie/main amd64 python3-fonttools amd64 4.55.3-2 [1633 kB] Get:187 http://deb.debian.org/debian trixie/main amd64 python3-contourpy amd64 1.3.1-1 [264 kB] Get:188 http://deb.debian.org/debian trixie/main amd64 python3-brotli amd64 1.1.0-2+b6 [321 kB] Get:189 http://deb.debian.org/debian trixie/main amd64 python3-lib2to3 all 3.13.1-1 [77.1 kB] Get:190 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.13.1-2 [27.0 kB] Get:191 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.13.1-2 [28.0 kB] Get:192 http://deb.debian.org/debian trixie/main amd64 libdouble-conversion3 amd64 3.3.0-1+b3 [41.9 kB] Get:193 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024b-6 [257 kB] Get:194 http://deb.debian.org/debian trixie/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1042 kB] Get:195 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:196 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:197 http://deb.debian.org/debian trixie/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB] Get:198 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+24 [217 kB] Get:199 http://deb.debian.org/debian trixie/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get:200 http://deb.debian.org/debian trixie/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get:201 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-2 [317 kB] Get:202 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-2 [391 kB] Get:203 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get:204 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get:205 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get:206 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get:207 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get:208 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b4 [27.8 kB] Get:209 http://deb.debian.org/debian trixie/main amd64 libxft2 amd64 2.3.6-1+b4 [54.5 kB] Get:210 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get:211 http://deb.debian.org/debian trixie/main amd64 libxss1 amd64 1:1.2.3-1+b3 [17.0 kB] Get:212 http://deb.debian.org/debian trixie/main amd64 libtk8.6 amd64 8.6.16-1 [793 kB] Get:213 http://deb.debian.org/debian trixie/main amd64 python3.12-tk amd64 3.12.8-5+b1 [113 kB] Get:214 http://deb.debian.org/debian trixie/main amd64 python3.13-tk amd64 3.13.1-3+b1 [104 kB] Get:215 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get:216 http://deb.debian.org/debian trixie/main amd64 libopenblas-pthread-dev amd64 0.3.28+ds-4 [4889 kB] Get:217 http://deb.debian.org/debian trixie/main amd64 libopenblas0-pthread amd64 0.3.28+ds-4 [6992 kB] Get:218 http://deb.debian.org/debian trixie/main amd64 libopenblas0 amd64 0.3.28+ds-4 [41.0 kB] Get:219 http://deb.debian.org/debian trixie/main amd64 libopenblas-dev amd64 0.3.28+ds-4 [54.5 kB] Get:220 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.1-2 [160 kB] Get:221 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.1-2 [2452 kB] Get:222 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get:223 http://deb.debian.org/debian trixie/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get:224 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get:225 http://deb.debian.org/debian trixie/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get:226 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get:227 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get:228 http://deb.debian.org/debian trixie/main amd64 libopenjp2-7 amd64 2.5.3-1 [204 kB] Get:229 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get:230 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get:231 http://deb.debian.org/debian trixie/main amd64 libraqm0 amd64 0.10.2-1 [13.9 kB] Get:232 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get:233 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get:234 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Get:235 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Get:236 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:237 http://deb.debian.org/debian trixie/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Get:238 http://deb.debian.org/debian trixie/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Get:239 http://deb.debian.org/debian trixie/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get:240 http://deb.debian.org/debian trixie/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get:241 http://deb.debian.org/debian trixie/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get:242 http://deb.debian.org/debian trixie/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get:243 http://deb.debian.org/debian trixie/main amd64 python3-cairo amd64 1.26.1-2+b1 [130 kB] Get:244 http://deb.debian.org/debian trixie/main amd64 python3-freetype all 2.5.1-1 [89.3 kB] Get:245 http://deb.debian.org/debian trixie/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B] Get:246 http://deb.debian.org/debian trixie/main amd64 fonts-lyx all 2.4.3-1 [190 kB] Get:247 http://deb.debian.org/debian trixie/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get:248 http://deb.debian.org/debian trixie/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get:249 http://deb.debian.org/debian trixie/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get:250 http://deb.debian.org/debian trixie/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get:251 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2024.2-1 [31.0 kB] Get:252 http://deb.debian.org/debian trixie/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get:253 http://deb.debian.org/debian trixie/main amd64 python3-fs all 2.4.16-6 [95.1 kB] Get:254 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get:255 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get:256 http://deb.debian.org/debian trixie/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB] Get:257 http://deb.debian.org/debian trixie/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB] Get:258 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get:259 http://deb.debian.org/debian trixie/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get:260 http://deb.debian.org/debian trixie/main amd64 python3-sympy all 1.13.3-1 [4147 kB] Get:261 http://deb.debian.org/debian trixie/main amd64 python3-attr all 25.1.0-1 [68.7 kB] Get:262 http://deb.debian.org/debian trixie/main amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB] Get:263 http://deb.debian.org/debian trixie/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get:264 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get:265 http://deb.debian.org/debian trixie/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get:266 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.8-5+b1 [817 kB] Get:267 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get:268 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:269 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.8-5+b1 [1972 kB] Get:270 http://deb.debian.org/debian trixie/main amd64 libpython3.12t64 amd64 3.12.8-5+b1 [2150 kB] Get:271 http://deb.debian.org/debian trixie/main amd64 libpython3.12-dev amd64 3.12.8-5+b1 [5129 kB] Get:272 http://deb.debian.org/debian trixie/main amd64 libpython3.13-stdlib amd64 3.13.1-3+b1 [1973 kB] Get:273 http://deb.debian.org/debian trixie/main amd64 libpython3.13 amd64 3.13.1-3+b1 [2151 kB] Get:274 http://deb.debian.org/debian trixie/main amd64 libpython3.13-dev amd64 3.13.1-3+b1 [5004 kB] Get:275 http://deb.debian.org/debian trixie/main amd64 python3.13 amd64 3.13.1-3+b1 [740 kB] Get:276 http://deb.debian.org/debian trixie/main amd64 python3.13-dev amd64 3.13.1-3+b1 [504 kB] Get:277 http://deb.debian.org/debian trixie/main amd64 libjs-sphinxdoc all 8.1.3-4 [30.4 kB] Get:278 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.13.1-2 [9952 B] Get:279 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.8-5+b1 [2164 kB] Get:280 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.8-5+b1 [678 kB] Get:281 http://deb.debian.org/debian trixie/main amd64 python3.12-dev amd64 3.12.8-5+b1 [505 kB] Get:282 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.4-2 [155 kB] Get:283 http://deb.debian.org/debian trixie/main amd64 gpgv amd64 2.2.46-1+b1 [219 kB] Get:284 http://deb.debian.org/debian trixie/main amd64 mawk amd64 1.3.4.20250131-1 [141 kB] Get:285 http://deb.debian.org/debian trixie/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-12 [11.0 MB] Get:286 http://deb.debian.org/debian trixie/main amd64 g++ amd64 4:14.2.0-1 [1344 B] Get:287 http://deb.debian.org/debian trixie/main amd64 gcc amd64 4:14.2.0-1 [5136 B] Get:288 http://deb.debian.org/debian trixie/main amd64 cpp amd64 4:14.2.0-1 [1568 B] Get:289 http://deb.debian.org/debian trixie/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1 [4840 B] Get:290 http://deb.debian.org/debian trixie/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-12 [21.4 MB] Get:291 http://deb.debian.org/debian trixie/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-12 [12.1 MB] Get:292 http://deb.debian.org/debian trixie/main amd64 cpp-14 amd64 14.2.0-12 [1280 B] Get:293 http://deb.debian.org/debian trixie/main amd64 gcc-14 amd64 14.2.0-12 [534 kB] Get:294 http://deb.debian.org/debian trixie/main amd64 g++-14 amd64 14.2.0-12 [20.5 kB] Get:295 http://deb.debian.org/debian trixie/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1 [1436 B] Get:296 http://deb.debian.org/debian trixie/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:297 http://deb.debian.org/debian trixie/main amd64 daligner amd64 1.0+git20240119.335105d-3 [242 kB] Get:298 http://deb.debian.org/debian trixie/main amd64 dazzdb amd64 1.0+git20240115.be65e59-1 [227 kB] Get:299 http://deb.debian.org/debian trixie/main amd64 libfmt10 amd64 10.1.1+ds1-4 [127 kB] Get:300 http://deb.debian.org/debian trixie/main amd64 python3-colormap all 1.3.0-1 [17.6 kB] Get:301 http://deb.debian.org/debian trixie/main amd64 python3-pbcore all 2.1.2+dfsg-10 [2831 kB] Get:302 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get:303 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB] Get:304 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get:305 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get:306 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get:307 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get:308 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:309 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 75.6.0-1 [222 kB] Get:310 http://deb.debian.org/debian trixie/main amd64 python3-networkx all 3.2.1-5 [13.0 MB] Get:311 http://deb.debian.org/debian trixie/main amd64 hinge amd64 0.5.0-7+b3 [477 kB] Get:312 http://deb.debian.org/debian trixie/main amd64 libss2 amd64 1.47.2-1 [28.7 kB] Get:313 http://deb.debian.org/debian trixie/main amd64 xtl-dev all 0.7.7-1 [90.3 kB] Get:314 http://deb.debian.org/debian trixie/main amd64 libxsimd-dev amd64 13.1.0-1 [132 kB] Get:315 http://deb.debian.org/debian trixie/main amd64 mailcap all 3.74 [32.8 kB] Get:316 http://deb.debian.org/debian trixie/main amd64 python3-colorama all 0.4.6-4 [36.2 kB] Get:317 http://deb.debian.org/debian trixie/main amd64 python3-colorlog all 6.9.0-1 [27.5 kB] Get:318 http://deb.debian.org/debian trixie/main amd64 python3-line-profiler amd64 4.2.0-1 [154 kB] Get:319 http://deb.debian.org/debian trixie/main amd64 python3-ptyprocess all 0.7.0-6 [14.5 kB] Get:320 http://deb.debian.org/debian trixie/main amd64 python3-pexpect all 4.9-3 [55.6 kB] Get:321 http://deb.debian.org/debian trixie/main amd64 python3-easydev all 0.13.3+dfsg1-1 [39.3 kB] Get:322 http://deb.debian.org/debian trixie/main amd64 python3-gast all 0.6.0-1 [18.7 kB] Get:323 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get:324 http://deb.debian.org/debian trixie/main amd64 python3-ply all 3.11-7 [62.6 kB] Get:325 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get:326 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 75.6.0-1 [720 kB] Get:327 http://deb.debian.org/debian trixie/main amd64 python3-pythran amd64 0.17.0+ds-1 [456 kB] Get:328 http://deb.debian.org/debian trixie/main amd64 python3-six all 1.17.0-1 [16.5 kB] Get:329 http://deb.debian.org/debian trixie/main amd64 xml-core all 0.19 [20.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 331 MB in 2s (195 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43604 files and directories currently installed.) Preparing to unpack .../base-files_13.6_amd64.deb ... Unpacking base-files (13.6) over (12.4+deb12u9) ... Setting up base-files (13.6) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Updating /etc/profile to current default. Updating /root/.profile to current default. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43615 files and directories currently installed.) Preparing to unpack .../0-libnsl-dev_1.3.0-3+b3_amd64.deb ... Unpacking libnsl-dev:amd64 (1.3.0-3+b3) over (1.3.0-2) ... Preparing to unpack .../1-libcrypt-dev_1%3a4.4.38-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.38-1) over (1:4.4.33-2) ... Preparing to unpack .../2-libc6-dev_2.40-6_amd64.deb ... Unpacking libc6-dev:amd64 (2.40-6) over (2.36-9+deb12u9) ... Preparing to unpack .../3-libc-dev-bin_2.40-6_amd64.deb ... Unpacking libc-dev-bin (2.40-6) over (2.36-9+deb12u9) ... Preparing to unpack .../4-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) over (1.3.3+ds-1) ... Preparing to unpack .../5-libtirpc-dev_1.3.4+ds-1.3+b1_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) over (1.3.3+ds-1) ... dpkg: libtirpc3:amd64: dependency problems, but removing anyway as you requested: libpython3.9-stdlib:amd64 depends on libtirpc3 (>= 1.0.2). libpython3.11-stdlib:amd64 depends on libtirpc3 (>= 1.0.2). libnsl2:amd64 depends on libtirpc3 (>= 1.0.2). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43623 files and directories currently installed.) Removing libtirpc3:amd64 (1.3.3+ds-1) ... Selecting previously unselected package libtirpc3t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43616 files and directories currently installed.) Preparing to unpack .../0-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Preparing to unpack .../1-libgssapi-krb5-2_1.21.3-4_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-4) over (1.20.1-2+deb12u2) ... Preparing to unpack .../2-libkrb5-3_1.21.3-4_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-4) over (1.20.1-2+deb12u2) ... Preparing to unpack .../3-libk5crypto3_1.21.3-4_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-4) over (1.20.1-2+deb12u2) ... Preparing to unpack .../4-libkrb5support0_1.21.3-4_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-4) over (1.20.1-2+deb12u2) ... Preparing to unpack .../5-libzstd1_1.5.6+dfsg-2_amd64.deb ... Unpacking libzstd1:amd64 (1.5.6+dfsg-2) over (1.5.4+dfsg2-5) ... Setting up libzstd1:amd64 (1.5.6+dfsg-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43630 files and directories currently installed.) Preparing to unpack .../libc6_2.40-6_amd64.deb ... Unpacking libc6:amd64 (2.40-6) over (2.36-9+deb12u9) ... Setting up libc6:amd64 (2.40-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43632 files and directories currently installed.) Preparing to unpack .../libc-bin_2.40-6_amd64.deb ... Unpacking libc-bin (2.40-6) over (2.36-9+deb12u9) ... Setting up libc-bin (2.40-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43632 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.3.0+dfsg-3_amd64.deb ... Unpacking libgmp10:amd64 (2:6.3.0+dfsg-3) over (2:6.2.1+dfsg1-1.1) ... Setting up libgmp10:amd64 (2:6.3.0+dfsg-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43632 files and directories currently installed.) Preparing to unpack .../zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) over (1:1.2.13.dfsg-1) ... Preparing to unpack .../zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1+b1) over (1:1.2.13.dfsg-1) ... Setting up zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43634 files and directories currently installed.) Preparing to unpack .../librtmp1_2.4+20151223.gitfa8646d.1-2+b5_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) over (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package gcc-14-base:amd64. Preparing to unpack .../gcc-14-base_14.2.0-12_amd64.deb ... Unpacking gcc-14-base:amd64 (14.2.0-12) ... Setting up gcc-14-base:amd64 (14.2.0-12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43639 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14.2.0-12_amd64.deb ... Unpacking libgcc-s1:amd64 (14.2.0-12) over (12.2.0-14) ... Setting up libgcc-s1:amd64 (14.2.0-12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43639 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.25.5-3_amd64.deb ... Unpacking libp11-kit0:amd64 (0.25.5-3) over (0.24.1-2) ... Setting up libp11-kit0:amd64 (0.25.5-3) ... Selecting previously unselected package libunistring5:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43639 files and directories currently installed.) Preparing to unpack .../libunistring5_1.3-1_amd64.deb ... Unpacking libunistring5:amd64 (1.3-1) ... dpkg: libnettle8:amd64: dependency problems, but removing anyway as you requested: libhogweed6:amd64 depends on libnettle8. libgnutls30:amd64 depends on libnettle8 (>= 3.7~). libcurl3-gnutls:amd64 depends on libnettle8. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43645 files and directories currently installed.) Removing libnettle8:amd64 (3.8.1-2) ... Selecting previously unselected package libnettle8t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43637 files and directories currently installed.) Preparing to unpack .../libnettle8t64_3.10-1+b1_amd64.deb ... Unpacking libnettle8t64:amd64 (3.10-1+b1) ... Setting up libnettle8t64:amd64 (3.10-1+b1) ... dpkg: libhogweed6:amd64: dependency problems, but removing anyway as you requested: libgnutls30:amd64 depends on libhogweed6 (>= 3.6). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43647 files and directories currently installed.) Removing libhogweed6:amd64 (3.8.1-2) ... Selecting previously unselected package libhogweed6t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43641 files and directories currently installed.) Preparing to unpack .../libhogweed6t64_3.10-1+b1_amd64.deb ... Unpacking libhogweed6t64:amd64 (3.10-1+b1) ... Setting up libhogweed6t64:amd64 (3.10-1+b1) ... dpkg: libgnutls30:amd64: dependency problems, but removing anyway as you requested: libldap-2.5-0:amd64 depends on libgnutls30 (>= 3.7.5). libldap-2.4-2:amd64 depends on libgnutls30 (>= 3.7.0). libcurl3-gnutls:amd64 depends on libgnutls30 (>= 3.7.5). apt depends on libgnutls30 (>= 3.7.5). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43649 files and directories currently installed.) Removing libgnutls30:amd64 (3.7.9-2+deb12u3) ... Selecting previously unselected package libgnutls30t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43620 files and directories currently installed.) Preparing to unpack .../libgnutls30t64_3.8.8-2_amd64.deb ... Unpacking libgnutls30t64:amd64 (3.8.8-2) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up libgnutls30t64:amd64 (3.8.8-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43649 files and directories currently installed.) Preparing to unpack .../libsystemd0_257.2-3_amd64.deb ... Unpacking libsystemd0:amd64 (257.2-3) over (252.33-1~deb12u1) ... Setting up libsystemd0:amd64 (257.2-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43649 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.7.0-2_amd64.deb ... Unpacking libpam-modules-bin (1.7.0-2) over (1.5.2-6+deb12u1) ... Setting up libpam-modules-bin (1.7.0-2) ... dpkg: libdb5.3:amd64: dependency problems, but removing anyway as you requested: libsasl2-modules-db:amd64 depends on libdb5.3. libpython3.9-stdlib:amd64 depends on libdb5.3. libpython3.11-stdlib:amd64 depends on libdb5.3. libperl5.36:amd64 depends on libdb5.3. libperl5.32:amd64 depends on libdb5.3. libpam-modules:amd64 depends on libdb5.3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43640 files and directories currently installed.) Removing libdb5.3:amd64 (5.3.28+dfsg2-1) ... Selecting previously unselected package libdb5.3t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43634 files and directories currently installed.) Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-9_amd64.deb ... Unpacking libdb5.3t64:amd64 (5.3.28+dfsg2-9) ... Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43640 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.7.0-2_amd64.deb ... Unpacking libpam-modules:amd64 (1.7.0-2) over (1.5.2-6+deb12u1) ... dpkg: warning: unable to delete old directory '/lib/x86_64-linux-gnu/security': Directory not empty Setting up libpam-modules:amd64 (1.7.0-2) ... Installing new version of config file /etc/security/access.conf ... Installing new version of config file /etc/security/namespace.init ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43589 files and directories currently installed.) Preparing to unpack .../libsasl2-modules-db_2.1.28+dfsg1-8+b1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-8+b1) over (2.1.28+dfsg-10) ... dpkg: libssh2-1:amd64: dependency problems, but removing anyway as you requested: libcurl3-gnutls:amd64 depends on libssh2-1 (>= 1.7.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43589 files and directories currently installed.) Removing libssh2-1:amd64 (1.10.0-3+b1) ... dpkg: libssl3:amd64: dependency problems, but removing anyway as you requested: libpython3.11-minimal:amd64 depends on libssl3 (>= 3.0.0). libhts3:amd64 depends on libssl3 (>= 3.0.0). Removing libssl3:amd64 (3.0.15-1~deb12u1) ... Selecting previously unselected package openssl-provider-legacy. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43568 files and directories currently installed.) Preparing to unpack .../openssl-provider-legacy_3.4.0-2_amd64.deb ... Unpacking openssl-provider-legacy (3.4.0-2) ... Selecting previously unselected package libssl3t64:amd64. Preparing to unpack .../libssl3t64_3.4.0-2_amd64.deb ... Unpacking libssl3t64:amd64 (3.4.0-2) ... Setting up libssl3t64:amd64 (3.4.0-2) ... Setting up openssl-provider-legacy (3.4.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43587 files and directories currently installed.) Preparing to unpack .../libsasl2-2_2.1.28+dfsg1-8+b1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-8+b1) over (2.1.28+dfsg-10) ... Selecting previously unselected package libldap2:amd64. Preparing to unpack .../libldap2_2.6.9+dfsg-1_amd64.deb ... Unpacking libldap2:amd64 (2.6.9+dfsg-1) ... Selecting previously unselected package libnghttp3-9:amd64. Preparing to unpack .../libnghttp3-9_1.6.0-2_amd64.deb ... Unpacking libnghttp3-9:amd64 (1.6.0-2) ... Selecting previously unselected package libngtcp2-16:amd64. Preparing to unpack .../libngtcp2-16_1.9.1-1_amd64.deb ... Unpacking libngtcp2-16:amd64 (1.9.1-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:amd64. Preparing to unpack .../libngtcp2-crypto-gnutls8_1.9.1-1_amd64.deb ... Unpacking libngtcp2-crypto-gnutls8:amd64 (1.9.1-1) ... dpkg: libpsl5:amd64: dependency problems, but removing anyway as you requested: libcurl3-gnutls:amd64 depends on libpsl5 (>= 0.16.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43614 files and directories currently installed.) Removing libpsl5:amd64 (0.21.2-1) ... Selecting previously unselected package libpsl5t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43608 files and directories currently installed.) Preparing to unpack .../libpsl5t64_0.21.2-1.1+b1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1+b1) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../libssh2-1t64_1.11.1-1_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.1-1) ... dpkg: libcurl3-gnutls:amd64: dependency problems, but removing anyway as you requested: libhts3:amd64 depends on libcurl3-gnutls (>= 7.18.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43624 files and directories currently installed.) Removing libcurl3-gnutls:amd64 (7.88.1-10+deb12u8) ... Selecting previously unselected package libcurl3t64-gnutls:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43616 files and directories currently installed.) Preparing to unpack .../libcurl3t64-gnutls_8.11.1-1+b1_amd64.deb ... Unpacking libcurl3t64-gnutls:amd64 (8.11.1-1+b1) ... dpkg: libhts3:amd64: dependency problems, but removing anyway as you requested: python3-pysam depends on libhts3 (>= 1.16). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43625 files and directories currently installed.) Removing libhts3:amd64 (1.16+ds-3) ... Selecting previously unselected package libhts3t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43610 files and directories currently installed.) Preparing to unpack .../libhts3t64_1.20+ds-2_amd64.deb ... Unpacking libhts3t64:amd64 (1.20+ds-2) ... Selecting previously unselected package sqv. Preparing to unpack .../archives/sqv_1.2.1-5_amd64.deb ... Unpacking sqv (1.2.1-5) ... Setting up sqv (1.2.1-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43639 files and directories currently installed.) Preparing to unpack .../libstdc++6_14.2.0-12_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-12) over (12.2.0-14) ... Setting up libstdc++6:amd64 (14.2.0-12) ... dpkg: libapt-pkg6.0:amd64: dependency problems, but removing anyway as you requested: apt depends on libapt-pkg6.0 (>= 2.6.1). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43639 files and directories currently installed.) Removing libapt-pkg6.0:amd64 (2.6.1) ... Selecting previously unselected package libapt-pkg6.0t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43590 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.27_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.27) ... Setting up libapt-pkg6.0t64:amd64 (2.9.27) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43640 files and directories currently installed.) Preparing to unpack .../libbz2-1.0_1.0.8-6_amd64.deb ... Unpacking libbz2-1.0:amd64 (1.0.8-6) over (1.0.8-5+b1) ... Setting up libbz2-1.0:amd64 (1.0.8-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43639 files and directories currently installed.) Preparing to unpack .../libxxhash0_0.8.3-2_amd64.deb ... Unpacking libxxhash0:amd64 (0.8.3-2) over (0.8.1-1) ... Setting up libxxhash0:amd64 (0.8.3-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43639 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.10.0-3_amd64.deb ... Unpacking liblz4-1:amd64 (1.10.0-3) over (1.9.4-1) ... Setting up liblz4-1:amd64 (1.10.0-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43639 files and directories currently installed.) Preparing to unpack .../liblzma5_5.6.3-1+b1_amd64.deb ... Unpacking liblzma5:amd64 (5.6.3-1+b1) over (5.4.1-0.2) ... Setting up liblzma5:amd64 (5.6.3-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43640 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.66-5+b1_amd64.deb ... Unpacking libcap2:amd64 (1:2.66-5+b1) over (1:2.66-4) ... Setting up libcap2:amd64 (1:2.66-5+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43641 files and directories currently installed.) Preparing to unpack .../libudev1_257.2-3_amd64.deb ... Unpacking libudev1:amd64 (257.2-3) over (252.33-1~deb12u1) ... Setting up libudev1:amd64 (257.2-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43641 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.277_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.277) over (0.270) ... Setting up libdebconfclient0:amd64 (0.277) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43641 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.44-5_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.44-5) over (10.42-1) ... Setting up libpcre2-8-0:amd64 (10.44-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43641 files and directories currently installed.) Preparing to unpack .../libselinux1_3.7-3.1_amd64.deb ... Unpacking libselinux1:amd64 (3.7-3.1) over (3.4-1+b6) ... Setting up libselinux1:amd64 (3.7-3.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43641 files and directories currently installed.) Preparing to unpack .../base-passwd_3.6.6_amd64.deb ... Unpacking base-passwd (3.6.6) over (3.6.1) ... Setting up base-passwd (3.6.6) ... Selecting previously unselected package login.defs. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43644 files and directories currently installed.) Preparing to unpack .../login.defs_1%3a4.16.0-7_all.deb ... Unpacking login.defs (1:4.16.0-7) ... Replacing files in old package login (1:4.13+dfsg1-1+b1) ... Setting up login.defs (1:4.16.0-7) ... Installing new version of config file /etc/login.defs ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43649 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a4.0.2-2_all.deb ... Unpacking libaudit-common (1:4.0.2-2) over (1:3.0.9-1) ... Setting up libaudit-common (1:4.0.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43649 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.8.5-4_amd64.deb ... Unpacking libcap-ng0:amd64 (0.8.5-4) over (0.8.3-1+b3) ... Setting up libcap-ng0:amd64 (0.8.5-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43648 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a4.0.2-2+b1_amd64.deb ... Unpacking libaudit1:amd64 (1:4.0.2-2+b1) over (1:3.0.9-1) ... Setting up libaudit1:amd64 (1:4.0.2-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43649 files and directories currently installed.) Preparing to unpack .../libcrypt1_1%3a4.4.38-1_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.4.38-1) over (1:4.4.33-2) ... Setting up libcrypt1:amd64 (1:4.4.38-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43649 files and directories currently installed.) Preparing to unpack .../perl_5.40.0-8_amd64.deb ... Unpacking perl (5.40.0-8) over (5.36.0-7+deb12u1) ... Selecting previously unselected package perl-modules-5.40. Preparing to unpack .../perl-modules-5.40_5.40.0-8_all.deb ... Unpacking perl-modules-5.40 (5.40.0-8) ... dpkg: libgdbm6:amd64: dependency problems, but removing anyway as you requested: libperl5.36:amd64 depends on libgdbm6 (>= 1.21). libperl5.32:amd64 depends on libgdbm6 (>= 1.18-3). libgdbm-compat4:amd64 depends on libgdbm6 (>= 1.16). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45212 files and directories currently installed.) Removing libgdbm6:amd64 (1.23-3) ... Selecting previously unselected package libgdbm6t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45206 files and directories currently installed.) Preparing to unpack .../libgdbm6t64_1.24-2_amd64.deb ... Unpacking libgdbm6t64:amd64 (1.24-2) ... dpkg: libgdbm-compat4:amd64: dependency problems, but removing anyway as you requested: libperl5.36:amd64 depends on libgdbm-compat4 (>= 1.18-3). libperl5.32:amd64 depends on libgdbm-compat4 (>= 1.18-3). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45213 files and directories currently installed.) Removing libgdbm-compat4:amd64 (1.23-3) ... Selecting previously unselected package libgdbm-compat4t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45207 files and directories currently installed.) Preparing to unpack .../libgdbm-compat4t64_1.24-2_amd64.deb ... Unpacking libgdbm-compat4t64:amd64 (1.24-2) ... Selecting previously unselected package libperl5.40:amd64. Preparing to unpack .../libperl5.40_5.40.0-8_amd64.deb ... Unpacking libperl5.40:amd64 (5.40.0-8) ... Preparing to unpack .../perl-base_5.40.0-8_amd64.deb ... Unpacking perl-base (5.40.0-8) over (5.36.0-7+deb12u1) ... Setting up perl-base (5.40.0-8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45738 files and directories currently installed.) Preparing to unpack .../debconf_1.5.89_all.deb ... Unpacking debconf (1.5.89) over (1.5.82) ... Setting up debconf (1.5.89) ... Installing new version of config file /etc/debconf.conf ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45737 files and directories currently installed.) Preparing to unpack .../libpam0g_1.7.0-2_amd64.deb ... Unpacking libpam0g:amd64 (1.7.0-2) over (1.5.2-6+deb12u1) ... Setting up libpam0g:amd64 (1.7.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45736 files and directories currently installed.) Preparing to unpack .../libacl1_2.3.2-2+b1_amd64.deb ... Unpacking libacl1:amd64 (2.3.2-2+b1) over (2.3.1-3) ... Setting up libacl1:amd64 (2.3.2-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45737 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.5.2-2_amd64.deb ... Unpacking libattr1:amd64 (1:2.5.2-2) over (1:2.5.1-4) ... Setting up libattr1:amd64 (1:2.5.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45737 files and directories currently installed.) Preparing to unpack .../libmd0_1.1.0-2+b1_amd64.deb ... Unpacking libmd0:amd64 (1.1.0-2+b1) over (1.0.4-2) ... Setting up libmd0:amd64 (1.1.0-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45738 files and directories currently installed.) Preparing to unpack .../libbsd0_0.12.2-2_amd64.deb ... Unpacking libbsd0:amd64 (0.12.2-2) over (0.11.7-2) ... Setting up libbsd0:amd64 (0.12.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45738 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.7-2.1_all.deb ... Unpacking libsemanage-common (3.7-2.1) over (3.4-1) ... Setting up libsemanage-common (3.7-2.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45737 files and directories currently installed.) Preparing to unpack .../libsepol2_3.7-1_amd64.deb ... Unpacking libsepol2:amd64 (3.7-1) over (3.4-2.1) ... Setting up libsepol2:amd64 (3.7-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45737 files and directories currently installed.) Preparing to unpack .../libsemanage2_3.7-2.1_amd64.deb ... Unpacking libsemanage2:amd64 (3.7-2.1) over (3.4-1+b5) ... Setting up libsemanage2:amd64 (3.7-2.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45736 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.16.0-7_amd64.deb ... Unpacking passwd (1:4.16.0-7) over (1:4.13+dfsg1-1+b1) ... Replacing files in old package login (1:4.13+dfsg1-1+b1) ... Setting up passwd (1:4.16.0-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45725 files and directories currently installed.) Preparing to unpack .../archives/adduser_3.137_all.deb ... Unpacking adduser (3.137) over (3.134) ... Setting up adduser (3.137) ... Installing new version of config file /etc/adduser.conf ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45719 files and directories currently installed.) Preparing to unpack .../debian-archive-keyring_2023.4_all.deb ... Unpacking debian-archive-keyring (2023.4) over (2023.3+deb12u1) ... Setting up debian-archive-keyring (2023.4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45719 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.5.5-2_amd64.deb ... Unpacking libseccomp2:amd64 (2.5.5-2) over (2.5.4-1+deb12u1) ... Setting up libseccomp2:amd64 (2.5.5-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45719 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.27_amd64.deb ... Unpacking apt (2.9.27) over (2.6.1) ... Setting up apt (2.9.27) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45709 files and directories currently installed.) Preparing to unpack .../libffi8_3.4.6-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.6-1) over (3.4.4-1) ... Setting up libffi8:amd64 (3.4.6-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45709 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.7-2+b1_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.7-2+b1) over (2.3.3-1+b1) ... Setting up libidn2-0:amd64 (2.3.7-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45710 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.19.0-3+b3_amd64.deb ... Unpacking libtasn1-6:amd64 (4.19.0-3+b3) over (4.19.0-2) ... Setting up libtasn1-6:amd64 (4.19.0-3+b3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 45711 files and directories currently installed.) Preparing to unpack .../0-libbrotli1_1.1.0-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b6) over (1.0.9-2+b6) ... Preparing to unpack .../1-libnghttp2-14_1.64.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.64.0-1) over (1.52.0-1+deb12u2) ... Preparing to unpack .../2-libdeflate0_1.23-1+b1_amd64.deb ... Unpacking libdeflate0:amd64 (1.23-1+b1) over (1.14-1) ... Preparing to unpack .../3-libhtscodecs2_1.6.1-1_amd64.deb ... Unpacking libhtscodecs2:amd64 (1.6.1-1) over (1.3.0-4) ... Preparing to unpack .../4-libcom-err2_1.47.2-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2-1) over (1.47.0-2) ... Preparing to unpack .../5-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) over (1.6.3-2) ... Preparing to unpack .../6-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) over (1.3.0-2) ... Preparing to unpack .../7-linux-libc-dev_6.12.12-1_all.deb ... Unpacking linux-libc-dev (6.12.12-1) over (6.1.123-1) ... Preparing to unpack .../8-debianutils_5.21_amd64.deb ... Unpacking debianutils (5.21) over (5.7-0.5~deb12u1) ... Setting up debianutils (5.21) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47412 files and directories currently installed.) Preparing to unpack .../bash_5.2.37-1_amd64.deb ... Unpacking bash (5.2.37-1) over (5.2.15-2+b7) ... Setting up bash (5.2.37-1) ... Installing new version of config file /etc/bash.bashrc ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47411 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.4-2_amd64.deb ... Unpacking bsdutils (1:2.40.4-2) over (1:2.38.1-5+deb12u3) ... Setting up bsdutils (1:2.40.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47412 files and directories currently installed.) Preparing to unpack .../usrmerge_39+nmu2_all.deb ... Unpacking usrmerge (39+nmu2) over (37~deb12u1) ... Setting up perl-modules-5.40 (5.40.0-8) ... Setting up libgdbm6t64:amd64 (1.24-2) ... Setting up libgdbm-compat4t64:amd64 (1.24-2) ... Setting up libperl5.40:amd64 (5.40.0-8) ... Setting up perl (5.40.0-8) ... Setting up usrmerge (39+nmu2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47412 files and directories currently installed.) Preparing to unpack .../coreutils_9.5-1+b1_amd64.deb ... Unpacking coreutils (9.5-1+b1) over (9.1-1) ... Setting up coreutils (9.5-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47418 files and directories currently installed.) Preparing to unpack .../dash_0.5.12-12_amd64.deb ... Unpacking dash (0.5.12-12) over (0.5.12-2) ... Setting up dash (0.5.12-12) ... Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47415 files and directories currently installed.) Preparing to unpack .../diffutils_1%3a3.10-2_amd64.deb ... Unpacking diffutils (1:3.10-2) over (1:3.8-4) ... Setting up diffutils (1:3.10-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47417 files and directories currently installed.) Preparing to unpack .../tar_1.35+dfsg-3.1_amd64.deb ... Unpacking tar (1.35+dfsg-3.1) over (1.34+dfsg-1.2+deb12u1) ... Setting up tar (1.35+dfsg-3.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47418 files and directories currently installed.) Preparing to unpack .../dpkg_1.22.15_amd64.deb ... Unpacking dpkg (1.22.15) over (1.21.22) ... Setting up dpkg (1.22.15) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47404 files and directories currently installed.) Preparing to unpack .../findutils_4.10.0-3_amd64.deb ... Unpacking findutils (4.10.0-3) over (4.9.0-4) ... Setting up findutils (4.10.0-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47402 files and directories currently installed.) Preparing to unpack .../archives/grep_3.11-4_amd64.deb ... Unpacking grep (3.11-4) over (3.8-5) ... Setting up grep (3.11-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47402 files and directories currently installed.) Preparing to unpack .../archives/gzip_1.13-1_amd64.deb ... Unpacking gzip (1.13-1) over (1.12-1) ... Setting up gzip (1.13-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47402 files and directories currently installed.) Preparing to unpack .../hostname_3.25_amd64.deb ... Unpacking hostname (3.25) over (3.23+nmu1) ... Setting up hostname (3.25) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47402 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.7.0-2_all.deb ... Unpacking libpam-runtime (1.7.0-2) over (1.5.2-6+deb12u1) ... Setting up libpam-runtime (1.7.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47462 files and directories currently installed.) Preparing to unpack .../login_1%3a4.16.0-2+really2.40.4-2_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.4-2) over (1:4.13+dfsg1-1+b1) ... Setting up login (1:4.16.0-2+really2.40.4-2) ... Installing new version of config file /etc/pam.d/login ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47392 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.5+20250125-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.5+20250125-2) over (6.4-4) ... Preparing to unpack .../libtinfo6_6.5+20250125-2_amd64.deb ... Unpacking libtinfo6:amd64 (6.5+20250125-2) over (6.4-4) ... Setting up libtinfo6:amd64 (6.5+20250125-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47392 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.5+20250125-2_amd64.deb ... Unpacking ncurses-bin (6.5+20250125-2) over (6.4-4) ... Setting up ncurses-bin (6.5+20250125-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47392 files and directories currently installed.) Preparing to unpack .../archives/sed_4.9-2_amd64.deb ... Unpacking sed (4.9-2) over (4.9-1) ... Setting up sed (4.9-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47392 files and directories currently installed.) Preparing to unpack .../libblkid1_2.40.4-2_amd64.deb ... Unpacking libblkid1:amd64 (2.40.4-2) over (2.38.1-5+deb12u3) ... Setting up libblkid1:amd64 (2.40.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47393 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.4-2_amd64.deb ... Unpacking libmount1:amd64 (2.40.4-2) over (2.38.1-5+deb12u3) ... Setting up libmount1:amd64 (2.40.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47394 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.4-2_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.4-2) over (2.38.1-5+deb12u3) ... Setting up libsmartcols1:amd64 (2.40.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47395 files and directories currently installed.) Preparing to unpack .../libuuid1_2.40.4-2_amd64.deb ... Unpacking libuuid1:amd64 (2.40.4-2) over (2.38.1-5+deb12u3) ... Setting up libuuid1:amd64 (2.40.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47396 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.4-2_amd64.deb ... Unpacking util-linux (2.40.4-2) over (2.38.1-5+deb12u3) ... Setting up util-linux (2.40.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47365 files and directories currently installed.) Preparing to unpack .../util-linux-extra_2.40.4-2_amd64.deb ... Adding 'diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra' Unpacking util-linux-extra (2.40.4-2) over (2.38.1-5+deb12u3) ... dpkg: warning: unable to delete old directory '/usr/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/usr/lib/udev': Directory not empty Setting up util-linux-extra (2.40.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47405 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.68_all.deb ... Unpacking init-system-helpers (1.68) over (1.65.2) ... Setting up init-system-helpers (1.68) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47405 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.5+20250125-2_all.deb ... Unpacking ncurses-base (6.5+20250125-2) over (6.4-4) ... Setting up ncurses-base (6.5+20250125-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47403 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.13-1_amd64.deb ... Unpacking sysvinit-utils (3.13-1) over (3.06-4) ... dpkg: warning: unable to delete old directory '/lib/lsb/init-functions.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/lsb': Directory not empty dpkg: warning: unable to delete old directory '/lib/init': Directory not empty Setting up sysvinit-utils (3.13-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 47403 files and directories currently installed.) Preparing to unpack .../00-libgomp1_14.2.0-12_amd64.deb ... Unpacking libgomp1:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../01-libitm1_14.2.0-12_amd64.deb ... Unpacking libitm1:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../02-libatomic1_14.2.0-12_amd64.deb ... Unpacking libatomic1:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../03-libasan8_14.2.0-12_amd64.deb ... Unpacking libasan8:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../04-liblsan0_14.2.0-12_amd64.deb ... Unpacking liblsan0:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../05-libisl23_0.27-1_amd64.deb ... Unpacking libisl23:amd64 (0.27-1) over (0.25-1.1) ... Preparing to unpack .../06-libmpfr6_4.2.1-1+b2_amd64.deb ... Unpacking libmpfr6:amd64 (4.2.1-1+b2) over (4.2.0-1) ... Preparing to unpack .../07-libmpc3_1.3.1-1+b3_amd64.deb ... Unpacking libmpc3:amd64 (1.3.1-1+b3) over (1.3.1-1) ... Preparing to unpack .../08-g++-12_12.4.0-4_amd64.deb ... Unpacking g++-12 (12.4.0-4) over (12.2.0-14) ... Preparing to unpack .../09-gcc-12_12.4.0-4_amd64.deb ... Unpacking gcc-12 (12.4.0-4) over (12.2.0-14) ... Preparing to unpack .../10-cpp-12_12.4.0-4_amd64.deb ... Unpacking cpp-12 (12.4.0-4) over (12.2.0-14) ... Preparing to unpack .../11-libubsan1_14.2.0-12_amd64.deb ... Unpacking libubsan1:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../12-libstdc++-12-dev_12.4.0-4_amd64.deb ... Unpacking libstdc++-12-dev:amd64 (12.4.0-4) over (12.2.0-14) ... Preparing to unpack .../13-libquadmath0_14.2.0-12_amd64.deb ... Unpacking libquadmath0:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../14-libgfortran5_14.2.0-12_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../15-libcc1-0_14.2.0-12_amd64.deb ... Unpacking libcc1-0:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../16-libgcc-12-dev_12.4.0-4_amd64.deb ... Unpacking libgcc-12-dev:amd64 (12.4.0-4) over (12.2.0-14) ... Preparing to unpack .../17-libtsan2_14.2.0-12_amd64.deb ... Unpacking libtsan2:amd64 (14.2.0-12) over (12.2.0-14) ... Preparing to unpack .../18-gcc-12-base_12.4.0-4_amd64.deb ... Unpacking gcc-12-base:amd64 (12.4.0-4) over (12.2.0-14) ... Preparing to unpack .../19-libgprofng0_2.44-1_amd64.deb ... Unpacking libgprofng0:amd64 (2.44-1) over (2.40-2) ... Preparing to unpack .../20-libctf0_2.44-1_amd64.deb ... Unpacking libctf0:amd64 (2.44-1) over (2.40-2) ... Preparing to unpack .../21-libctf-nobfd0_2.44-1_amd64.deb ... Unpacking libctf-nobfd0:amd64 (2.44-1) over (2.40-2) ... Selecting previously unselected package libsframe1:amd64. Preparing to unpack .../22-libsframe1_2.44-1_amd64.deb ... Unpacking libsframe1:amd64 (2.44-1) ... Preparing to unpack .../23-binutils-x86-64-linux-gnu_2.44-1_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.44-1) over (2.40-2) ... Preparing to unpack .../24-binutils-common_2.44-1_amd64.deb ... Unpacking binutils-common:amd64 (2.44-1) over (2.40-2) ... Removing obsolete conffile /etc/gprofng.rc ... Preparing to unpack .../25-binutils_2.44-1_amd64.deb ... Unpacking binutils (2.44-1) over (2.40-2) ... Preparing to unpack .../26-libbinutils_2.44-1_amd64.deb ... Unpacking libbinutils:amd64 (2.44-1) over (2.40-2) ... Preparing to unpack .../27-libjansson4_2.14-2+b3_amd64.deb ... Unpacking libjansson4:amd64 (2.14-2+b3) over (2.14-2) ... Selecting previously unselected package libhwasan0:amd64. Preparing to unpack .../28-libhwasan0_14.2.0-12_amd64.deb ... Unpacking libhwasan0:amd64 (14.2.0-12) ... Selecting previously unselected package libgcc-14-dev:amd64. Preparing to unpack .../29-libgcc-14-dev_14.2.0-12_amd64.deb ... Unpacking libgcc-14-dev:amd64 (14.2.0-12) ... Selecting previously unselected package libstdc++-14-dev:amd64. Preparing to unpack .../30-libstdc++-14-dev_14.2.0-12_amd64.deb ... Unpacking libstdc++-14-dev:amd64 (14.2.0-12) ... Preparing to unpack .../31-libboost-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-dev:amd64 (1.83.0.2+b2) over (1.74.0.3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 48493 files and directories currently installed.) Removing libboost1.74-dev:amd64 (1.74.0+ds1-21) ... Selecting previously unselected package libboost1.83-dev:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 32985 files and directories currently installed.) Preparing to unpack .../libboost1.83-dev_1.83.0-4_amd64.deb ... Unpacking libboost1.83-dev:amd64 (1.83.0-4) ... Preparing to unpack .../logsave_1.47.2-1_amd64.deb ... Unpacking logsave (1.47.2-1) over (1.47.0-2) ... dpkg: libext2fs2:amd64: dependency problems, but removing anyway as you requested: e2fsprogs depends on libext2fs2 (= 1.47.0-2). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49944 files and directories currently installed.) Removing libext2fs2:amd64 (1.47.0-2) ... Selecting previously unselected package libext2fs2t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49937 files and directories currently installed.) Preparing to unpack .../libext2fs2t64_1.47.2-1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.2-1) ... Setting up libcom-err2:amd64 (1.47.2-1) ... Setting up libext2fs2t64:amd64 (1.47.2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49953 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.47.2-1_amd64.deb ... Unpacking e2fsprogs (1.47.2-1) over (1.47.0-2) ... dpkg: warning: unable to delete old directory '/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/udev': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd': Directory not empty Preparing to unpack .../libharfbuzz0b_10.2.0-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (10.2.0-1) over (6.0.0+dfsg-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49950 files and directories currently installed.) Removing libglib2.0-0:amd64 (2.74.6-2+deb12u5) ... Selecting previously unselected package libglib2.0-0t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49926 files and directories currently installed.) Preparing to unpack .../libglib2.0-0t64_2.82.4-2_amd64.deb ... libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:amd64.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... removed '/var/lib/dpkg/info/libglib2.0-0:amd64.postrm' Unpacking libglib2.0-0t64:amd64 (2.82.4-2) ... Preparing to unpack .../libfreetype6_2.13.3+dfsg-1_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) over (2.12.1+dfsg-5+deb12u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49951 files and directories currently installed.) Removing libpng16-16:amd64 (1.6.39-2) ... Selecting previously unselected package libpng16-16t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49940 files and directories currently installed.) Preparing to unpack .../libpng16-16t64_1.6.46-4_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.46-4) ... Preparing to unpack .../readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) over (8.2-1.3) ... dpkg: libreadline8:amd64: dependency problems, but removing anyway as you requested: libpython3.9-stdlib:amd64 depends on libreadline8 (>= 7.0~beta). libpython3.11-stdlib:amd64 depends on libreadline8 (>= 7.0~beta). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49952 files and directories currently installed.) Removing libreadline8:amd64 (8.2-1.3) ... Selecting previously unselected package libreadline8t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 49939 files and directories currently installed.) Preparing to unpack .../0-libreadline8t64_8.2-6_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../1-libpython3.13-minimal_3.13.1-3+b1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.1-3+b1) ... Preparing to unpack .../2-libexpat1-dev_2.6.4-1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.6.4-1) over (2.5.0-1+deb12u1) ... Preparing to unpack .../3-libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) over (2.5.0-1+deb12u1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../4-python3.13-minimal_3.13.1-3+b1_amd64.deb ... Unpacking python3.13-minimal (3.13.1-3+b1) ... Preparing to unpack .../5-python3-all-dev_3.13.1-2_amd64.deb ... Unpacking python3-all-dev (3.13.1-2) over (3.11.2-1+b1) ... Preparing to unpack .../6-python3-all_3.13.1-2_amd64.deb ... Unpacking python3-all (3.13.1-2) over (3.11.2-1+b1) ... Preparing to unpack .../7-libpython3-all-dev_3.13.1-2_amd64.deb ... Unpacking libpython3-all-dev:amd64 (3.13.1-2) over (3.11.2-1+b1) ... Preparing to unpack .../8-libpython3-dev_3.13.1-2_amd64.deb ... Unpacking libpython3-dev:amd64 (3.13.1-2) over (3.11.2-1+b1) ... Preparing to unpack .../9-python3-dev_3.13.1-2_amd64.deb ... Unpacking python3-dev (3.13.1-2) over (3.11.2-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 50282 files and directories currently installed.) Removing python3-distutils (3.11.2-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 50227 files and directories currently installed.) Preparing to unpack .../0-python3-ujson_5.10.0-1+b3_amd64.deb ... Unpacking python3-ujson:amd64 (5.10.0-1+b3) over (5.7.0-1) ... Preparing to unpack .../1-tk8.6-blt2.5_2.5.3+dfsg-7_amd64.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) over (2.5.3+dfsg-4.1) ... Preparing to unpack .../2-blt_2.5.3+dfsg-7_amd64.deb ... Unpacking blt (2.5.3+dfsg-7) over (2.5.3+dfsg-4.1) ... Preparing to unpack .../3-python3-tk_3.13.1-1_amd64.deb ... Unpacking python3-tk:amd64 (3.13.1-1) over (3.11.2-3) ... dpkg: warning: unable to delete old directory '/usr/lib/python3.11/tkinter': Directory not empty Preparing to unpack .../4-python3-scipy_1.14.1-4_amd64.deb ... Unpacking python3-scipy (1.14.1-4) over (1.10.1-2) ... Preparing to unpack .../5-python3-biopython_1.84+dfsg-4+b2_amd64.deb ... Unpacking python3-biopython (1.84+dfsg-4+b2) over (1.80+dfsg-4+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 50491 files and directories currently installed.) Removing python3-renderpm:amd64 (3.6.12-1+deb12u1) ... dpkg: python3-reportlab-accel:amd64: dependency problems, but removing anyway as you requested: python3-reportlab depends on python3-reportlab-accel (>= 3.6.12-1+deb12u1). Removing python3-reportlab-accel:amd64 (3.6.12-1+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 50481 files and directories currently installed.) Preparing to unpack .../00-python3-reportlab_4.2.5-1_all.deb ... Unpacking python3-reportlab (4.2.5-1) over (3.6.12-1+deb12u1) ... Preparing to unpack .../01-python3-pysam_0.22.1+ds-2+b2_amd64.deb ... Unpacking python3-pysam (0.22.1+ds-2+b2) over (0.20.0+ds-3+b1) ... Preparing to unpack .../02-python3-pil.imagetk_10.4.0-1.1_amd64.deb ... Unpacking python3-pil.imagetk:amd64 (10.4.0-1.1) over (9.4.0-1.1+deb12u1) ... Preparing to unpack .../03-python3-pil_10.4.0-1.1_amd64.deb ... Unpacking python3-pil:amd64 (10.4.0-1.1) over (9.4.0-1.1+deb12u1) ... Preparing to unpack .../04-python3-numpy_1%3a1.26.4+ds-13_amd64.deb ... Unpacking python3-numpy (1:1.26.4+ds-13) over (1:1.24.2-1+deb12u1) ... Preparing to unpack .../05-python3-matplotlib_3.8.3-3+b3_amd64.deb ... Unpacking python3-matplotlib (3.8.3-3+b3) over (3.6.3-1+b1) ... Preparing to unpack .../06-python3-lz4_4.4.0+dfsg-1_amd64.deb ... Unpacking python3-lz4 (4.4.0+dfsg-1) over (4.0.2+dfsg-1+b2) ... Preparing to unpack .../07-python3-lxml_5.3.0-1+b1_amd64.deb ... Unpacking python3-lxml:amd64 (5.3.0-1+b1) over (4.9.2-1+b1) ... Preparing to unpack .../08-python3-kiwisolver_1.4.7-3_amd64.deb ... Unpacking python3-kiwisolver (1.4.7-3) over (1.4.4-1+b1) ... Preparing to unpack .../09-python3-fonttools_4.55.3-2_amd64.deb ... Unpacking python3-fonttools (4.55.3-2) over (4.38.0-1+b1) ... Preparing to unpack .../10-python3-contourpy_1.3.1-1_amd64.deb ... Unpacking python3-contourpy (1.3.1-1) over (1.0.7-1+b1) ... Preparing to unpack .../11-python3-brotli_1.1.0-2+b6_amd64.deb ... Unpacking python3-brotli (1.1.0-2+b6) over (1.0.9-2+b6) ... Preparing to unpack .../12-python3-lib2to3_3.13.1-1_all.deb ... Unpacking python3-lib2to3 (3.13.1-1) over (3.11.2-3) ... Setting up libpython3.13-minimal:amd64 (3.13.1-3+b1) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.13-minimal (3.13.1-3+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51062 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.13.1-2_amd64.deb ... Unpacking python3-minimal (3.13.1-2) over (3.11.2-1+b1) ... Setting up python3-minimal (3.13.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51061 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.1-2_amd64.deb ... Unpacking python3 (3.13.1-2) over (3.11.2-1+b1) ... Preparing to unpack .../01-libdouble-conversion3_3.3.0-1+b3_amd64.deb ... Unpacking libdouble-conversion3:amd64 (3.3.0-1+b3) over (3.2.1-1) ... Preparing to unpack .../02-tzdata_2024b-6_all.deb ... Unpacking tzdata (2024b-6) over (2024b-0+deb12u1) ... Preparing to unpack .../03-libtcl8.6_8.6.16+dfsg-1_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) over (8.6.13+dfsg-2) ... Preparing to unpack .../04-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) over (2.37-6) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../05-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Preparing to unpack .../06-libfontenc1_1%3a1.1.8-1+b2_amd64.deb ... Unpacking libfontenc1:amd64 (1:1.1.8-1+b2) over (1:1.1.4-1) ... Preparing to unpack .../07-x11-common_1%3a7.7+24_all.deb ... Unpacking x11-common (1:7.7+24) over (1:7.7+23) ... Preparing to unpack .../08-xfonts-utils_1%3a7.7+7_amd64.deb ... Unpacking xfonts-utils (1:7.7+7) over (1:7.7+6) ... Preparing to unpack .../09-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) over (20200910-7) ... Preparing to unpack .../10-fontconfig-config_2.15.0-2_amd64.deb ... Unpacking fontconfig-config (2.15.0-2) over (2.14.1-4) ... Preparing to unpack .../11-libfontconfig1_2.15.0-2_amd64.deb ... Unpacking libfontconfig1:amd64 (2.15.0-2) over (2.14.1-4) ... Preparing to unpack .../12-libxau6_1%3a1.0.11-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.11-1) over (1:1.0.9-1) ... Preparing to unpack .../13-libxdmcp6_1%3a1.1.5-1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.5-1) over (1:1.1.2-3) ... Preparing to unpack .../14-libxcb1_1.17.0-2+b1_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2+b1) over (1.15-1) ... Preparing to unpack .../15-libx11-data_2%3a1.8.10-2_all.deb ... Unpacking libx11-data (2:1.8.10-2) over (2:1.8.4-2+deb12u2) ... Preparing to unpack .../16-libx11-6_2%3a1.8.10-2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.10-2) over (2:1.8.4-2+deb12u2) ... Preparing to unpack .../17-libxrender1_1%3a0.9.10-1.1+b4_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1+b4) over (1:0.9.10-1.1) ... Preparing to unpack .../18-libxft2_2.3.6-1+b4_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1+b4) over (2.3.6-1) ... Preparing to unpack .../19-libxext6_2%3a1.3.4-1+b3_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b3) over (2:1.3.4-1+b1) ... Preparing to unpack .../20-libxss1_1%3a1.2.3-1+b3_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1+b3) over (1:1.2.3-1) ... Preparing to unpack .../21-libtk8.6_8.6.16-1_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.16-1) over (8.6.13-2) ... Selecting previously unselected package python3.12-tk. Preparing to unpack .../22-python3.12-tk_3.12.8-5+b1_amd64.deb ... Unpacking python3.12-tk (3.12.8-5+b1) ... Selecting previously unselected package python3.13-tk. Preparing to unpack .../23-python3.13-tk_3.13.1-3+b1_amd64.deb ... Unpacking python3.13-tk (3.13.1-3+b1) ... Preparing to unpack .../24-python3-decorator_5.1.1-5_all.deb ... Unpacking python3-decorator (5.1.1-5) over (5.1.1-3) ... Preparing to unpack .../25-libopenblas-pthread-dev_0.3.28+ds-4_amd64.deb ... Unpacking libopenblas-pthread-dev:amd64 (0.3.28+ds-4) over (0.3.21+ds-4) ... Preparing to unpack .../26-libopenblas0-pthread_0.3.28+ds-4_amd64.deb ... Unpacking libopenblas0-pthread:amd64 (0.3.28+ds-4) over (0.3.21+ds-4) ... Preparing to unpack .../27-libopenblas0_0.3.28+ds-4_amd64.deb ... Unpacking libopenblas0:amd64 (0.3.28+ds-4) over (0.3.21+ds-4) ... Preparing to unpack .../28-libopenblas-dev_0.3.28+ds-4_amd64.deb ... Unpacking libopenblas-dev:amd64 (0.3.28+ds-4) over (0.3.21+ds-4) ... Preparing to unpack .../29-libblas3_3.12.1-2_amd64.deb ... Unpacking libblas3:amd64 (3.12.1-2) over (3.11.0-2) ... Preparing to unpack .../30-liblapack3_3.12.1-2_amd64.deb ... Unpacking liblapack3:amd64 (3.12.1-2) over (3.11.0-2) ... Preparing to unpack .../31-liblbfgsb0_3.0+dfsg.4-1+b2_amd64.deb ... Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) over (3.0+dfsg.4-1) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../32-python3-chardet_5.2.0+dfsg-2_all.deb ... Unpacking python3-chardet (5.2.0+dfsg-2) ... Preparing to unpack .../33-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) over (10.0.0) ... Preparing to unpack .../34-libimagequant0_2.18.0-1+b2_amd64.deb ... Unpacking libimagequant0:amd64 (2.18.0-1+b2) over (2.17.0-1) ... Preparing to unpack .../35-libjpeg62-turbo_1%3a2.1.5-3+b1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-3+b1) over (1:2.1.5-2) ... Preparing to unpack .../36-liblcms2-2_2.16-2_amd64.deb ... Unpacking liblcms2-2:amd64 (2.16-2) over (2.14-2) ... Preparing to unpack .../37-libopenjp2-7_2.5.3-1_amd64.deb ... Unpacking libopenjp2-7:amd64 (2.5.3-1) over (2.5.0-2) ... Preparing to unpack .../38-libfribidi0_1.0.16-1_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.16-1) over (1.0.8-2.1) ... Preparing to unpack .../39-libgraphite2-3_1.3.14-2+b1_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-2+b1) over (1.3.14-1) ... Preparing to unpack .../40-libraqm0_0.10.2-1_amd64.deb ... Unpacking libraqm0:amd64 (0.10.2-1) over (0.7.0-4.1) ... Preparing to unpack .../41-libjbig0_2.1-6.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-6.1+b2) over (2.1-6.1) ... Preparing to unpack .../42-liblerc4_4.0.0+ds-5_amd64.deb ... Unpacking liblerc4:amd64 (4.0.0+ds-5) over (4.0.0+ds-2) ... Selecting previously unselected package libsharpyuv0:amd64. Preparing to unpack .../43-libsharpyuv0_1.5.0-0.1_amd64.deb ... Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... Preparing to unpack .../44-libwebp7_1.5.0-0.1_amd64.deb ... Unpacking libwebp7:amd64 (1.5.0-0.1) over (1.2.4-0.2+deb12u1) ... Preparing to unpack .../45-libtiff6_4.5.1+git230720-5_amd64.deb ... Unpacking libtiff6:amd64 (4.5.1+git230720-5) over (4.5.0-6+deb12u2) ... Preparing to unpack .../46-libwebpdemux2_1.5.0-0.1_amd64.deb ... Unpacking libwebpdemux2:amd64 (1.5.0-0.1) over (1.2.4-0.2+deb12u1) ... Preparing to unpack .../47-libwebpmux3_1.5.0-0.1_amd64.deb ... Unpacking libwebpmux3:amd64 (1.5.0-0.1) over (1.2.4-0.2+deb12u1) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../48-libpixman-1-0_0.44.0-3_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.44.0-3) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../49-libxcb-render0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-render0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../50-libxcb-shm0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../51-libcairo2_1.18.2-2_amd64.deb ... Unpacking libcairo2:amd64 (1.18.2-2) ... Selecting previously unselected package python3-cairo. Preparing to unpack .../52-python3-cairo_1.26.1-2+b1_amd64.deb ... Unpacking python3-cairo (1.26.1-2+b1) ... Selecting previously unselected package python3-freetype. Preparing to unpack .../53-python3-freetype_2.5.1-1_all.deb ... Unpacking python3-freetype (2.5.1-1) ... Selecting previously unselected package python3-rlpycairo. Preparing to unpack .../54-python3-rlpycairo_0.3.0-3_all.deb ... Unpacking python3-rlpycairo (0.3.0-3) ... Preparing to unpack .../55-fonts-lyx_2.4.3-1_all.deb ... Unpacking fonts-lyx (2.4.3-1) over (2.3.7-1) ... Preparing to unpack .../56-python-matplotlib-data_3.8.3-3_all.deb ... Unpacking python-matplotlib-data (3.8.3-3) over (3.6.3-1) ... Preparing to unpack .../57-python3-dateutil_2.9.0-3_all.deb ... Unpacking python3-dateutil (2.9.0-3) over (2.8.2-2) ... Preparing to unpack .../58-python3-pyparsing_3.1.2-1_all.deb ... Unpacking python3-pyparsing (3.1.2-1) over (3.0.9-1) ... Preparing to unpack .../59-python3-cycler_0.12.1-1_all.deb ... Unpacking python3-cycler (0.12.1-1) over (0.11.0-1) ... Preparing to unpack .../60-python3-tz_2024.2-1_all.deb ... Unpacking python3-tz (2024.2-1) over (2022.7.1-4) ... Selecting previously unselected package python3-platformdirs. Preparing to unpack .../61-python3-platformdirs_4.3.6-1_all.deb ... Unpacking python3-platformdirs (4.3.6-1) ... Preparing to unpack .../62-python3-fs_2.4.16-6_all.deb ... Unpacking python3-fs (2.4.16-6) over (2.4.16-2) ... Preparing to unpack .../63-libicu72_72.1-6_amd64.deb ... Unpacking libicu72:amd64 (72.1-6) over (72.1-3) ... Preparing to unpack .../64-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) over (2.9.14+dfsg-1.3~deb12u1) ... Preparing to unpack .../65-libgpg-error0_1.51-3_amd64.deb ... Unpacking libgpg-error0:amd64 (1.51-3) over (1.46-1) ... Setting up libgpg-error0:amd64 (1.51-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 50578 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.11.0-7_amd64.deb ... Unpacking libgcrypt20:amd64 (1.11.0-7) over (1.10.1-3) ... Setting up libgcrypt20:amd64 (1.11.0-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 50578 files and directories currently installed.) Preparing to unpack .../00-libxslt1.1_1.1.35-1.1+b1_amd64.deb ... Unpacking libxslt1.1:amd64 (1.1.35-1.1+b1) over (1.1.35-1) ... Preparing to unpack .../01-python3-mpmath_1.3.0-1_all.deb ... Unpacking python3-mpmath (1.3.0-1) over (1.2.1-2) ... Preparing to unpack .../02-python3-sympy_1.13.3-1_all.deb ... Unpacking python3-sympy (1.13.3-1) over (1.11.1-1) ... Preparing to unpack .../03-python3-attr_25.1.0-1_all.deb ... Unpacking python3-attr (25.1.0-1) over (22.2.0-1) ... Preparing to unpack .../04-python3-ufolib2_0.17.0+dfsg1-1_all.deb ... Unpacking python3-ufolib2 (0.17.0+dfsg1-1) over (0.14.0+dfsg1-1) ... Preparing to unpack .../05-unicode-data_15.1.0-1_all.deb ... Unpacking unicode-data (15.1.0-1) over (15.0.0-1) ... Preparing to unpack .../06-python3-packaging_24.2-1_all.deb ... Unpacking python3-packaging (24.2-1) over (23.0-1) ... Preparing to unpack .../07-libqhull-r8.0_2020.2-6+b2_amd64.deb ... Unpacking libqhull-r8.0:amd64 (2020.2-6+b2) over (2020.2-5) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../08-libpython3.12-minimal_3.12.8-5+b1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.8-5+b1) ... Selecting previously unselected package netbase. Preparing to unpack .../09-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Preparing to unpack .../10-libsqlite3-0_3.46.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.1-1) over (3.40.1-2+deb12u1) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../11-libpython3.12-stdlib_3.12.8-5+b1_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.8-5+b1) ... Selecting previously unselected package libpython3.12t64:amd64. Preparing to unpack .../12-libpython3.12t64_3.12.8-5+b1_amd64.deb ... Unpacking libpython3.12t64:amd64 (3.12.8-5+b1) ... Selecting previously unselected package libpython3.12-dev:amd64. Preparing to unpack .../13-libpython3.12-dev_3.12.8-5+b1_amd64.deb ... Unpacking libpython3.12-dev:amd64 (3.12.8-5+b1) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../14-libpython3.13-stdlib_3.13.1-3+b1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.1-3+b1) ... Selecting previously unselected package libpython3.13:amd64. Preparing to unpack .../15-libpython3.13_3.13.1-3+b1_amd64.deb ... Unpacking libpython3.13:amd64 (3.13.1-3+b1) ... Selecting previously unselected package libpython3.13-dev:amd64. Preparing to unpack .../16-libpython3.13-dev_3.13.1-3+b1_amd64.deb ... Unpacking libpython3.13-dev:amd64 (3.13.1-3+b1) ... Selecting previously unselected package python3.13. Preparing to unpack .../17-python3.13_3.13.1-3+b1_amd64.deb ... Unpacking python3.13 (3.13.1-3+b1) ... Selecting previously unselected package python3.13-dev. Preparing to unpack .../18-python3.13-dev_3.13.1-3+b1_amd64.deb ... Unpacking python3.13-dev (3.13.1-3+b1) ... Preparing to unpack .../19-libjs-sphinxdoc_8.1.3-4_all.deb ... Unpacking libjs-sphinxdoc (8.1.3-4) over (5.3.0-4) ... Preparing to unpack .../20-libpython3-stdlib_3.13.1-2_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.13.1-2) over (3.11.2-1+b1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../21-python3.12-minimal_3.12.8-5+b1_amd64.deb ... Unpacking python3.12-minimal (3.12.8-5+b1) ... Selecting previously unselected package python3.12. Preparing to unpack .../22-python3.12_3.12.8-5+b1_amd64.deb ... Unpacking python3.12 (3.12.8-5+b1) ... Selecting previously unselected package python3.12-dev. Preparing to unpack .../23-python3.12-dev_3.12.8-5+b1_amd64.deb ... Unpacking python3.12-dev (3.12.8-5+b1) ... Preparing to unpack .../24-mount_2.40.4-2_amd64.deb ... Unpacking mount (2.40.4-2) over (2.38.1-5+deb12u3) ... Preparing to unpack .../25-gpgv_2.2.46-1+b1_amd64.deb ... Unpacking gpgv (2.2.46-1+b1) over (2.2.40-1.1) ... Setting up gpgv (2.2.46-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52340 files and directories currently installed.) Preparing to unpack .../00-mawk_1.3.4.20250131-1_amd64.deb ... Unpacking mawk (1.3.4.20250131-1) over (1.3.4.20200120-3.1) ... Selecting previously unselected package cpp-14-x86-64-linux-gnu. Preparing to unpack .../01-cpp-14-x86-64-linux-gnu_14.2.0-12_amd64.deb ... Unpacking cpp-14-x86-64-linux-gnu (14.2.0-12) ... Preparing to unpack .../02-g++_4%3a14.2.0-1_amd64.deb ... Unpacking g++ (4:14.2.0-1) over (4:12.2.0-3) ... Preparing to unpack .../03-gcc_4%3a14.2.0-1_amd64.deb ... Unpacking gcc (4:14.2.0-1) over (4:12.2.0-3) ... Preparing to unpack .../04-cpp_4%3a14.2.0-1_amd64.deb ... Unpacking cpp (4:14.2.0-1) over (4:12.2.0-3) ... Selecting previously unselected package cpp-x86-64-linux-gnu. Preparing to unpack .../05-cpp-x86-64-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package gcc-14-x86-64-linux-gnu. Preparing to unpack .../06-gcc-14-x86-64-linux-gnu_14.2.0-12_amd64.deb ... Unpacking gcc-14-x86-64-linux-gnu (14.2.0-12) ... Selecting previously unselected package g++-14-x86-64-linux-gnu. Preparing to unpack .../07-g++-14-x86-64-linux-gnu_14.2.0-12_amd64.deb ... Unpacking g++-14-x86-64-linux-gnu (14.2.0-12) ... Selecting previously unselected package cpp-14. Preparing to unpack .../08-cpp-14_14.2.0-12_amd64.deb ... Unpacking cpp-14 (14.2.0-12) ... Selecting previously unselected package gcc-14. Preparing to unpack .../09-gcc-14_14.2.0-12_amd64.deb ... Unpacking gcc-14 (14.2.0-12) ... Selecting previously unselected package g++-14. Preparing to unpack .../10-g++-14_14.2.0-12_amd64.deb ... Unpacking g++-14 (14.2.0-12) ... Selecting previously unselected package gcc-x86-64-linux-gnu. Preparing to unpack .../11-gcc-x86-64-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package g++-x86-64-linux-gnu. Preparing to unpack .../12-g++-x86-64-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking g++-x86-64-linux-gnu (4:14.2.0-1) ... Preparing to unpack .../13-daligner_1.0+git20240119.335105d-3_amd64.deb ... Unpacking daligner (1.0+git20240119.335105d-3) over (1.0+git20221215.bd26967-1) ... Preparing to unpack .../14-dazzdb_1.0+git20240115.be65e59-1_amd64.deb ... Unpacking dazzdb (1.0+git20240115.be65e59-1) over (1.0+git20221215.aad3a46-1) ... Selecting previously unselected package libfmt10:amd64. Preparing to unpack .../15-libfmt10_10.1.1+ds1-4_amd64.deb ... Unpacking libfmt10:amd64 (10.1.1+ds1-4) ... Preparing to unpack .../16-python3-colormap_1.3.0-1_all.deb ... Unpacking python3-colormap (1.3.0-1) over (1.0.4-3) ... Preparing to unpack .../17-python3-pbcore_2.1.2+dfsg-10_all.deb ... Unpacking python3-pbcore (2.1.2+dfsg-10) over (2.1.2+dfsg-5) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../18-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../19-python3-more-itertools_10.6.0-1_all.deb ... Unpacking python3-more-itertools (10.6.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../20-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../21-python3-typeguard_4.4.1-1_all.deb ... Unpacking python3-typeguard (4.4.1-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../22-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../23-python3-jaraco.context_6.0.0-1_all.deb ... Unpacking python3-jaraco.context (6.0.0-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../24-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Preparing to unpack .../25-python3-pkg-resources_75.6.0-1_all.deb ... Unpacking python3-pkg-resources (75.6.0-1) over (66.1.1-1+deb12u1) ... Preparing to unpack .../26-python3-networkx_3.2.1-5_all.deb ... Unpacking python3-networkx (3.2.1-5) over (2.8.8-1) ... Preparing to unpack .../27-hinge_0.5.0-7+b3_amd64.deb ... Unpacking hinge (0.5.0-7+b3) over (0.5.0-7+b1) ... Preparing to unpack .../28-libss2_1.47.2-1_amd64.deb ... Unpacking libss2:amd64 (1.47.2-1) over (1.47.0-2) ... Selecting previously unselected package xtl-dev. Preparing to unpack .../29-xtl-dev_0.7.7-1_all.deb ... Unpacking xtl-dev (0.7.7-1) ... Preparing to unpack .../30-libxsimd-dev_13.1.0-1_amd64.deb ... Unpacking libxsimd-dev:amd64 (13.1.0-1) over (8.1.0-7) ... Preparing to unpack .../31-mailcap_3.74_all.deb ... Unpacking mailcap (3.74) over (3.70+nmu1) ... Preparing to unpack .../32-python3-colorama_0.4.6-4_all.deb ... Unpacking python3-colorama (0.4.6-4) over (0.4.6-2) ... Preparing to unpack .../33-python3-colorlog_6.9.0-1_all.deb ... Unpacking python3-colorlog (6.9.0-1) over (6.7.0-1) ... Selecting previously unselected package python3-line-profiler. Preparing to unpack .../34-python3-line-profiler_4.2.0-1_amd64.deb ... Unpacking python3-line-profiler (4.2.0-1) ... Preparing to unpack .../35-python3-ptyprocess_0.7.0-6_all.deb ... Unpacking python3-ptyprocess (0.7.0-6) over (0.7.0-5) ... Preparing to unpack .../36-python3-pexpect_4.9-3_all.deb ... Unpacking python3-pexpect (4.9-3) over (4.8.0-4) ... Preparing to unpack .../37-python3-easydev_0.13.3+dfsg1-1_all.deb ... Unpacking python3-easydev (0.13.3+dfsg1-1) over (0.12.0+dfsg-4) ... Preparing to unpack .../38-python3-gast_0.6.0-1_all.deb ... Unpacking python3-gast (0.6.0-1) over (0.5.2-2) ... Selecting previously unselected package python3-jaraco.text. Preparing to unpack .../39-python3-jaraco.text_4.0.0-1_all.deb ... Unpacking python3-jaraco.text (4.0.0-1) ... Preparing to unpack .../40-python3-ply_3.11-7_all.deb ... Unpacking python3-ply (3.11-7) over (3.11-5) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../41-python3-zipp_3.21.0-1_all.deb ... Unpacking python3-zipp (3.21.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../42-python3-setuptools_75.6.0-1_all.deb ... Unpacking python3-setuptools (75.6.0-1) ... Preparing to unpack .../43-python3-pythran_0.17.0+ds-1_amd64.deb ... Unpacking python3-pythran (0.17.0+ds-1) over (0.11.0+ds-7) ... Preparing to unpack .../44-python3-six_1.17.0-1_all.deb ... Unpacking python3-six (1.17.0-1) over (1.16.0-4) ... Preparing to unpack .../45-xml-core_0.19_all.deb ... Unpacking xml-core (0.19) over (0.18+nmu1) ... Setting up libhtscodecs2:amd64 (1.6.1-1) ... Setting up media-types (10.1.0) ... Installing new version of config file /etc/mime.types ... Setting up libgraphite2-3:amd64 (1.3.14-2+b1) ... Setting up liblcms2-2:amd64 (2.16-2) ... Setting up libpixman-1-0:amd64 (0.44.0-3) ... Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... Setting up libxau6:amd64 (1:1.0.11-1) ... Setting up libxdmcp6:amd64 (1:1.1.5-1) ... Setting up libdouble-conversion3:amd64 (3.3.0-1+b3) ... Setting up libkeyutils1:amd64 (1.6.3-4) ... Setting up libxcb1:amd64 (1.17.0-2+b1) ... Setting up libicu72:amd64 (72.1-6) ... Setting up liblerc4:amd64 (4.0.0+ds-5) ... Setting up libxcb-render0:amd64 (1.17.0-2+b1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up fonts-lyx (2.4.3-1) ... Setting up libbrotli1:amd64 (1.1.0-2+b6) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up libpython3.12-minimal:amd64 (3.12.8-5+b1) ... Setting up binutils-common:amd64 (2.44-1) ... Setting up x11-common (1:7.7+24) ... Installing new version of config file /etc/X11/Xsession.d/20x11-common_process-args ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:amd64 (1.64.0-1) ... Setting up libdeflate0:amd64 (1.23-1+b1) ... Setting up linux-libc-dev (6.12.12-1) ... Setting up libctf-nobfd0:amd64 (2.44-1) ... Setting up libqhull-r8.0:amd64 (2020.2-6+b2) ... Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ... Setting up libgomp1:amd64 (14.2.0-12) ... Setting up libjbig0:amd64 (2.1-6.1+b2) ... Setting up libsframe1:amd64 (2.44-1) ... Setting up libjansson4:amd64 (2.14-2+b3) ... Setting up libkrb5support0:amd64 (1.21.3-4) ... Setting up gcc-12-base:amd64 (12.4.0-4) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8+b1) ... Setting up tzdata (2024b-6) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Feb 9 16:38:15 UTC 2025. Universal Time is now: Sun Feb 9 16:38:15 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up dazzdb (1.0+git20240115.be65e59-1) ... Setting up libfontenc1:amd64 (1:1.1.8-1+b2) ... Setting up libblas3:amd64 (3.12.1-2) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libmpfr6:amd64 (4.2.1-1+b2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libfribidi0:amd64 (1.0.16-1) ... Setting up libquadmath0:amd64 (14.2.0-12) ... Setting up libimagequant0:amd64 (2.18.0-1+b2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.46-4) ... Setting up libmpc3:amd64 (1.3.1-1+b3) ... Setting up libatomic1:amd64 (14.2.0-12) ... Setting up libss2:amd64 (1.47.2-1) ... Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... Setting up fonts-dejavu-core (2.37-8) ... Removing obsolete conffile /etc/fonts/conf.avail/20-unhint-small-dejavu-lgc-sans-mono.conf ... Removing obsolete conffile /etc/fonts/conf.avail/20-unhint-small-dejavu-sans-mono.conf ... Removing obsolete conffile /etc/fonts/conf.avail/57-dejavu-sans-mono.conf ... Removing obsolete conffile /etc/fonts/conf.avail/58-dejavu-lgc-sans-mono.conf ... Setting up xtl-dev (0.7.7-1) ... Setting up libncursesw6:amd64 (6.5+20250125-2) ... Setting up libk5crypto3:amd64 (1.21.3-4) ... Setting up libjs-sphinxdoc (8.1.3-4) ... Setting up logsave (1.47.2-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8+b1) ... Setting up libgfortran5:amd64 (14.2.0-12) ... Setting up libnghttp3-9:amd64 (1.6.0-2) ... Setting up libwebp7:amd64 (1.5.0-0.1) ... Setting up libubsan1:amd64 (14.2.0-12) ... Setting up mount (2.40.4-2) ... Setting up libhwasan0:amd64 (14.2.0-12) ... Setting up libcrypt-dev:amd64 (1:4.4.38-1) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up xml-core (0.19) ... Setting up libasan8:amd64 (14.2.0-12) ... Setting up daligner (1.0+git20240119.335105d-3) ... Setting up libopenjp2-7:amd64 (2.5.3-1) ... Setting up libx11-6:amd64 (2:1.8.10-2) ... Setting up netbase (6.4) ... Setting up libngtcp2-16:amd64 (1.9.1-1) ... Setting up mawk (1.3.4.20250131-1) ... Setting up libkrb5-3:amd64 (1.21.3-4) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libtsan2:amd64 (14.2.0-12) ... Setting up libbinutils:amd64 (2.44-1) ... Setting up libisl23:amd64 (0.27-1) ... Setting up libc-dev-bin (2.40-6) ... Setting up python-matplotlib-data (3.8.3-3) ... Installing new version of config file /etc/matplotlibrc ... Setting up libwebpmux3:amd64 (1.5.0-0.1) ... Setting up mailcap (3.74) ... Setting up readline-common (8.2-6) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libcc1-0:amd64 (14.2.0-12) ... Setting up libldap2:amd64 (2.6.9+dfsg-1) ... Setting up libfmt10:amd64 (10.1.1+ds1-4) ... Setting up liblsan0:amd64 (14.2.0-12) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.9.1-1) ... Setting up libitm1:amd64 (14.2.0-12) ... Setting up libctf0:amd64 (2.44-1) ... Setting up python3.12-minimal (3.12.8-5+b1) ... Setting up liblapack3:amd64 (3.12.1-2) ... Setting up cpp-12 (12.4.0-4) ... Setting up libopenblas0-pthread:amd64 (0.3.28+ds-4) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b4) ... Setting up fontconfig-config (2.15.0-2) ... Setting up libwebpdemux2:amd64 (1.5.0-0.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up e2fsprogs (1.47.2-1) ... Installing new version of config file /etc/cron.d/e2scrub_all ... Installing new version of config file /etc/mke2fs.conf ... Setting up libxsimd-dev:amd64 (13.1.0-1) ... Setting up libglib2.0-0t64:amd64 (2.82.4-2) ... No schema files found: doing nothing. Setting up libgprofng0:amd64 (2.44-1) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libgcc-12-dev:amd64 (12.4.0-4) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-4) ... Setting up cpp-14-x86-64-linux-gnu (14.2.0-12) ... Setting up cpp-14 (14.2.0-12) ... Setting up libreadline8t64:amd64 (8.2-6) ... Setting up libopenblas0:amd64 (0.3.28+ds-4) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libc6-dev:amd64 (2.40-6) ... Setting up libharfbuzz0b:amd64 (10.2.0-1) ... Setting up libxss1:amd64 (1:1.2.3-1+b3) ... Setting up libgcc-14-dev:amd64 (14.2.0-12) ... Setting up libstdc++-14-dev:amd64 (14.2.0-12) ... Setting up libpython3.13-stdlib:amd64 (3.13.1-3+b1) ... Setting up libpython3-stdlib:amd64 (3.13.1-2) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up binutils-x86-64-linux-gnu (2.44-1) ... Setting up libpython3.13:amd64 (3.13.1-3+b1) ... Setting up cpp-x86-64-linux-gnu (4:14.2.0-1) ... Setting up libopenblas-pthread-dev:amd64 (0.3.28+ds-4) ... Setting up libboost1.83-dev:amd64 (1.83.0-4) ... Setting up libstdc++-12-dev:amd64 (12.4.0-4) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up python3.13 (3.13.1-3+b1) ... Setting up libcurl3t64-gnutls:amd64 (8.11.1-1+b1) ... Setting up python3 (3.13.1-2) ... Setting up binutils (2.44-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-freetype (2.5.1-1) ... Setting up xfonts-utils (1:7.7+7) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-ujson:amd64 (5.10.0-1+b3) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-tz (2024.2-1) ... Setting up python3-fs (2.4.16-6) ... Setting up python3-six (1.17.0-1) ... Setting up libopenblas-dev:amd64 (0.3.28+ds-4) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.2-1) ... Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up libexpat1-dev:amd64 (2.6.4-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up gcc-12 (12.4.0-4) ... Setting up python3-brotli (1.1.0-2+b6) ... Setting up libraqm0:amd64 (0.10.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-numpy (1:1.26.4+ds-13) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up python3-lxml:amd64 (5.3.0-1+b1) ... Setting up cpp (4:14.2.0-1) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up libhts3t64:amd64 (1.20+ds-2) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-contourpy (1.3.1-1) ... Setting up libboost-dev:amd64 (1.83.0.2+b2) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-12) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-lib2to3 (3.13.1-1) ... python3.13: can't get files for byte-compilation Setting up python3-ptyprocess (0.7.0-6) ... Setting up g++-12 (12.4.0-4) ... Setting up python3-more-itertools (10.6.0-1) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (25.1.0-1) ... Setting up python3-pysam (0.22.1+ds-2+b2) ... Setting up python3-scipy (1.14.1-4) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up libpython3.12-stdlib:amd64 (3.12.8-5+b1) ... Setting up gcc-x86-64-linux-gnu (4:14.2.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-colorama (0.4.6-4) ... Setting up python3-colorlog (6.9.0-1) ... Setting up python3-lz4 (4.4.0+dfsg-1) ... Setting up python3.12 (3.12.8-5+b1) ... Setting up python3-line-profiler (4.2.0-1) ... Setting up python3-ply (3.11-7) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-gast (0.6.0-1) ... Setting up python3-all (3.13.1-2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up gcc-14 (14.2.0-12) ... Setting up libpython3.12t64:amd64 (3.12.8-5+b1) ... Setting up python3-pil:amd64 (10.4.0-1.1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pexpect (4.9-3) ... Setting up libpython3.13-dev:amd64 (3.13.1-3+b1) ... Setting up g++-14-x86-64-linux-gnu (14.2.0-12) ... Setting up libnsl-dev:amd64 (1.3.0-3+b3) ... Setting up g++-x86-64-linux-gnu (4:14.2.0-1) ... Setting up g++-14 (14.2.0-12) ... Setting up python3-pkg-resources (75.6.0-1) ... Setting up libpython3-dev:amd64 (3.13.1-2) ... Setting up python3-setuptools (75.6.0-1) ... Setting up python3.13-dev (3.13.1-3+b1) ... Setting up libpython3.12-dev:amd64 (3.12.8-5+b1) ... Setting up python3-networkx (3.2.1-5) ... Setting up python3-easydev (0.13.3+dfsg1-1) ... Setting up gcc (4:14.2.0-1) ... Setting up libpython3-all-dev:amd64 (3.13.1-2) ... Setting up python3-dev (3.13.1-2) ... Setting up python3.12-dev (3.12.8-5+b1) ... Setting up g++ (4:14.2.0-1) ... Setting up python3-all-dev (3.13.1-2) ... Setting up python3-pythran (0.17.0+ds-1) ... Setting up python3-fonttools (4.55.3-2) ... Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... Processing triggers for sgml-base (1.31) ... Processing triggers for debianutils (5.21) ... Setting up libfontconfig1:amd64 (2.15.0-2) ... Setting up libxft2:amd64 (2.3.6-1+b4) ... Setting up libtk8.6:amd64 (8.6.16-1) ... Processing triggers for libc-bin (2.40-6) ... Setting up python3.12-tk (3.12.8-5+b1) ... Setting up libcairo2:amd64 (1.18.2-2) ... Setting up python3.13-tk (3.13.1-3+b1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up python3-cairo (1.26.1-2+b1) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3-tk:amd64 (3.13.1-1) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1.1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up python3-reportlab (4.2.5-1) ... Setting up python3-biopython (1.84+dfsg-4+b2) ... Setting up python3-matplotlib (3.8.3-3+b3) ... Setting up python3-pbcore (2.1.2+dfsg-10) ... Setting up python3-colormap (1.3.0-1) ... Setting up hinge (0.5.0-7+b3) ... Processing triggers for libc-bin (2.40-6) ... 1m59.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-yf', 'dist-upgrade'] 1m59.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 2m0.3s DUMP: fade716d905e5548bbcc096a6a92f18a - 2m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 2m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'show', '--no-all-versions', 'hinge'] 2m0.4s DUMP: Package: hinge Source: hinge (0.5.0-7) Version: 0.5.0-7+b3 Installed-Size: 3096 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.38), libfmt10 (>= 10.1.1+ds1), libgcc-s1 (>= 3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4), python3, daligner, dazzdb, dascrubber, python3-numpy, python3-ujson, python3-colormap, python3-pbcore, python3-networkx, python3-matplotlib Description-en: long read genome assembler based on hinging HINGE is a genome assembler that seeks to achieve optimal repeat resolution by distinguishing repeats that can be resolved given the data from those that cannot. This is accomplished by adding ??hinges?? to reads for constructing an overlap graph where only unresolvable repeats are merged. As a result, HINGE combines the error resilience of overlap-based assemblers with repeat-resolution capabilities of de Bruijn graph assemblers. Description-md5: 796f6bb30e0dd11acb73bb5eeeaf4c08 Homepage: https://github.com/HingeAssembler/HINGE Section: science Priority: optional Filename: pool/main/h/hinge/hinge_0.5.0-7+b3_amd64.deb Size: 477416 MD5sum: 6cb86b393d16f7bd532afd92345c2246 SHA256: 1c5d68715adc3b49c32dbadbd23a1899b2bbac8d712abf8f4a66d4ad8d7c8c68 2m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'show', '--no-all-versions', 'hinge'] 2m0.4s INFO: apt-cache knows about the following packages: hinge 2m0.4s INFO: Running scripts pre_install 2m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_database-server'] 2m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_database-server'] 2m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_exceptions'] 2m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_exceptions'] 2m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_extras'] 2m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_extras'] 2m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture'] 2m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture'] 2m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture_i386'] 2m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_install_foreign_architecture_i386'] 2m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy'] 2m0.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 2m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy'] 2m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy', 'hinge'] 2m0.4s DUMP: hinge: Installed: 0.5.0-7+b3 Candidate: 0.5.0-7+b3 Version table: *** 0.5.0-7+b3 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 100 /var/lib/dpkg/status 2m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-cache', 'policy', 'hinge'] 2m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-y', 'install', 'hinge'] 2m0.7s DUMP: Reading package lists... Building dependency tree... Reading state information... hinge is already the newest version (0.5.0-7+b3). The following packages were automatically installed and are no longer required: libboost-dev libboost1.83-dev libfile-find-rule-perl libfmt7 libfmt9 libldap-2.4-2 libldap-2.5-0 libmpdec3 libnsl-dev libnumber-compare-perl libopenblas-dev libopenblas-pthread-dev libopenblas0 libperl5.32 libperl5.36 libpython3-all-dev libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.12-dev libpython3.12t64 libpython3.9-minimal libpython3.9-stdlib libtext-glob-perl libtiff5 libtirpc-dev libwebp6 libxsimd-dev perl-modules-5.32 perl-modules-5.36 python3-all-dev python3-appdirs python3-beniget python3-colorama python3-colorlog python3-easydev python3-gast python3-lib2to3 python3-line-profiler python3-pexpect python3-ply python3-ptyprocess python3-pythran python3-six python3.11 python3.11-dev python3.11-minimal python3.12-dev python3.9 python3.9-minimal ttf-bitstream-vera usrmerge xtl-dev Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2m0.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-y', 'install', 'hinge'] 2m0.7s INFO: Running scripts post_install 2m0.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_install_exceptions'] 2m0.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_install_exceptions'] 2m0.7s INFO: Running scripts post_distupgrade 2m0.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_base_cleanup'] 2m0.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_base_cleanup'] 2m0.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_exceptions'] 2m0.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_exceptions'] 2m0.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 2m0.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 2m0.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_squeeze-backports'] 2m0.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_squeeze-backports'] 2m0.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_zz_backports'] 2m0.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/post_distupgrade_zz_backports'] 2m0.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 2m2.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 2m2.4s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpuk_9m0zi to sid 2m2.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 2m2.4s INFO: Running scripts pre_distupgrade 2m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 2m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 2m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_exceptions'] 2m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_exceptions'] 2m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 2m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 2m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_database-server'] 2m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_database-server'] 2m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 2m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 2m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', 'update'] 2m4.4s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [205 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.0 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7345 kB] Fetched 17.6 MB in 1s (12.2 MB/s) Reading package lists... 2m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', 'update'] 2m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-yf', 'dist-upgrade'] 2m11.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libboost-dev libboost1.83-dev libfile-find-rule-perl libfmt7 libfmt9 libldap-2.4-2 libldap-2.5-0 libmpdec3 libnsl-dev libnumber-compare-perl libopenblas-dev libopenblas-pthread-dev libopenblas0 libperl5.32 libperl5.36 libpython3-all-dev libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.12-dev libpython3.12t64 libpython3.9-minimal libpython3.9-stdlib libtext-glob-perl libtiff5 libtirpc-dev libwebp6 libxsimd-dev perl-modules-5.32 perl-modules-5.36 python3-all-dev python3-appdirs python3-beniget python3-colorama python3-colorlog python3-easydev python3-gast python3-lib2to3 python3-line-profiler python3-pexpect python3-ply python3-ptyprocess python3-pythran python3-six python3.11 python3.11-dev python3.11-minimal python3.12-dev python3.9 python3.9-minimal ttf-bitstream-vera usrmerge xtl-dev Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: python3-numpy-dev python3-pytz The following packages will be upgraded: apt bsdutils cpp-14 cpp-14-x86-64-linux-gnu g++-14 g++-14-x86-64-linux-gnu gcc-14 gcc-14-base gcc-14-x86-64-linux-gnu libapt-pkg6.0t64 libasan8 libatomic1 libblkid1 libcc1-0 libgcc-14-dev libgcc-s1 libgfortran5 libglib2.0-0t64 libgomp1 libhts3t64 libhwasan0 libitm1 libldap-2.5-0 liblsan0 libmount1 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libpcre2-8-0 libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libquadmath0 libselinux1 libsepol2 libsmartcols1 libstdc++-14-dev libstdc++6 libtasn1-6 libtsan2 libubsan1 libuuid1 login media-types mount python3-appdirs python3-biopython python3-numpy python3-pil python3-pil.imagetk python3-pysam python3-sympy python3-tz python3.12 python3.12-dev python3.12-minimal python3.12-tk python3.13 python3.13-dev python3.13-minimal python3.13-tk sqv tzdata util-linux util-linux-extra 71 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 128 MB of archives. After this operation, 8626 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.40.4-3 [106 kB] Get:2 http://deb.debian.org/debian sid/main amd64 util-linux-extra amd64 2.40.4-3 [266 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.40.4-3 [36.3 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.40.4-3 [169 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.40.4-3 [200 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.40.4-3 [140 kB] Get:7 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.40.4-3 [1214 kB] Get:8 http://deb.debian.org/debian sid/main amd64 mount amd64 2.40.4-3 [155 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libpcre2-8-0 amd64 10.45-1 [298 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libselinux1 amd64 3.8-1 [84.3 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libcc1-0 amd64 14.2.0-16 [42.8 kB] Get:12 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-16 [48.9 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-16 [72.8 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 14.2.0-16 [137 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libitm1 amd64 14.2.0-16 [25.9 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 14.2.0-16 [9296 B] Get:17 http://deb.debian.org/debian sid/main amd64 libasan8 amd64 14.2.0-16 [2729 kB] Get:18 http://deb.debian.org/debian sid/main amd64 liblsan0 amd64 14.2.0-16 [1205 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libtsan2 amd64 14.2.0-16 [2461 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libubsan1 amd64 14.2.0-16 [1075 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libhwasan0 amd64 14.2.0-16 [1489 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 14.2.0-16 [145 kB] Get:23 http://deb.debian.org/debian sid/main amd64 gcc-14 amd64 14.2.0-16 [537 kB] Get:24 http://deb.debian.org/debian sid/main amd64 g++-14 amd64 14.2.0-16 [21.8 kB] Get:25 http://deb.debian.org/debian sid/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-16 [12.1 MB] Get:26 http://deb.debian.org/debian sid/main amd64 libstdc++-14-dev amd64 14.2.0-16 [2373 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libgcc-14-dev amd64 14.2.0-16 [2671 kB] Get:28 http://deb.debian.org/debian sid/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-16 [21.4 MB] Get:29 http://deb.debian.org/debian sid/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-16 [11.1 MB] Get:30 http://deb.debian.org/debian sid/main amd64 cpp-14 amd64 14.2.0-16 [1276 B] Get:31 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14.2.0-16 [836 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-16 [713 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libapt-pkg6.0t64 amd64 2.9.28 [1119 kB] Get:34 http://deb.debian.org/debian sid/main amd64 sqv amd64 1.2.1-6 [623 kB] Get:35 http://deb.debian.org/debian sid/main amd64 apt amd64 2.9.28 [1440 kB] Get:36 http://deb.debian.org/debian sid/main amd64 login amd64 1:4.16.0-2+really2.40.4-3 [88.5 kB] Get:37 http://deb.debian.org/debian sid/main amd64 python3.12-dev amd64 3.12.9-1 [505 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libpython3.12-dev amd64 3.12.9-1 [5125 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libpython3.12t64 amd64 3.12.9-1 [2151 kB] Get:40 http://deb.debian.org/debian sid/main amd64 python3.12 amd64 3.12.9-1 [681 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libpython3.12-stdlib amd64 3.12.9-1 [1974 kB] Get:42 http://deb.debian.org/debian sid/main amd64 python3.12-minimal amd64 3.12.9-1 [2163 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libpython3.12-minimal amd64 3.12.9-1 [817 kB] Get:44 http://deb.debian.org/debian sid/main amd64 media-types all 11.0.0 [27.6 kB] Get:45 http://deb.debian.org/debian sid/main amd64 tzdata all 2025a-2 [259 kB] Get:46 http://deb.debian.org/debian sid/main amd64 python3.13-dev amd64 3.13.2-1 [507 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libpython3.13-dev amd64 3.13.2-1 [5005 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libpython3.13 amd64 3.13.2-1 [2151 kB] Get:49 http://deb.debian.org/debian sid/main amd64 python3.13 amd64 3.13.2-1 [745 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB] Get:51 http://deb.debian.org/debian sid/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB] Get:52 http://deb.debian.org/debian sid/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libsepol2 amd64 3.8-1 [296 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libglib2.0-0t64 amd64 2.83.3-2 [1511 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libhts3t64 amd64 1.21+ds-1 [463 kB] Get:56 http://deb.debian.org/debian sid/main amd64 libldap-2.5-0 amd64 2.5.19+dfsg-1 [187 kB] Get:57 http://deb.debian.org/debian sid/main amd64 libopenblas-pthread-dev amd64 0.3.29+ds-2 [5062 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libopenblas0-pthread amd64 0.3.29+ds-2 [6737 kB] Get:59 http://deb.debian.org/debian sid/main amd64 libopenblas-dev amd64 0.3.29+ds-2 [56.9 kB] Get:60 http://deb.debian.org/debian sid/main amd64 libopenblas0 amd64 0.3.29+ds-2 [42.6 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libtasn1-6 amd64 4.20.0-1 [49.9 kB] Get:62 http://deb.debian.org/debian sid/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get:63 http://deb.debian.org/debian sid/main amd64 python3-biopython amd64 1.85+dfsg-2 [1674 kB] Get:64 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:2.2.2+ds-2 [7507 kB] Get:65 http://deb.debian.org/debian sid/main amd64 python3-numpy-dev amd64 1:2.2.2+ds-2 [138 kB] Get:66 http://deb.debian.org/debian sid/main amd64 python3-pil.imagetk amd64 11.1.0-5 [81.5 kB] Get:67 http://deb.debian.org/debian sid/main amd64 python3-pil amd64 11.1.0-5 [531 kB] Get:68 http://deb.debian.org/debian sid/main amd64 python3-pysam amd64 0.23.0+ds-1 [4527 kB] Get:69 http://deb.debian.org/debian sid/main amd64 python3-pytz all 2025.1-2 [150 kB] Get:70 http://deb.debian.org/debian sid/main amd64 python3-sympy all 1.13.3-2 [4148 kB] Get:71 http://deb.debian.org/debian sid/main amd64 python3-tz all 2025.1-2 [3972 B] Get:72 http://deb.debian.org/debian sid/main amd64 python3.12-tk amd64 3.12.9-1 [113 kB] Get:73 http://deb.debian.org/debian sid/main amd64 python3.13-tk amd64 3.13.2-1 [103 kB] Preconfiguring packages ... Fetched 128 MB in 1s (217 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.4-3_amd64.deb ... Unpacking bsdutils (1:2.40.4-3) over (1:2.40.4-2) ... Setting up bsdutils (1:2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../util-linux-extra_2.40.4-3_amd64.deb ... Leaving 'diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra' Unpacking util-linux-extra (2.40.4-3) over (2.40.4-2) ... Preparing to unpack .../libuuid1_2.40.4-3_amd64.deb ... Unpacking libuuid1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libuuid1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libblkid1_2.40.4-3_amd64.deb ... Unpacking libblkid1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libblkid1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.4-3_amd64.deb ... Unpacking libmount1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libmount1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.4-3_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libsmartcols1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.4-3_amd64.deb ... Unpacking util-linux (2.40.4-3) over (2.40.4-2) ... Setting up util-linux (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../mount_2.40.4-3_amd64.deb ... Unpacking mount (2.40.4-3) over (2.40.4-2) ... Preparing to unpack .../libpcre2-8-0_10.45-1_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.45-1) over (10.44-5) ... Setting up libpcre2-8-0:amd64 (10.45-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libselinux1_3.8-1_amd64.deb ... Unpacking libselinux1:amd64 (3.8-1) over (3.7-3.1) ... Setting up libselinux1:amd64 (3.8-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libcc1-0_14.2.0-16_amd64.deb ... Unpacking libcc1-0:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../gcc-14-base_14.2.0-16_amd64.deb ... Unpacking gcc-14-base:amd64 (14.2.0-16) over (14.2.0-12) ... Setting up gcc-14-base:amd64 (14.2.0-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14.2.0-16_amd64.deb ... Unpacking libgcc-s1:amd64 (14.2.0-16) over (14.2.0-12) ... Setting up libgcc-s1:amd64 (14.2.0-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../00-libgomp1_14.2.0-16_amd64.deb ... Unpacking libgomp1:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../01-libitm1_14.2.0-16_amd64.deb ... Unpacking libitm1:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../02-libatomic1_14.2.0-16_amd64.deb ... Unpacking libatomic1:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../03-libasan8_14.2.0-16_amd64.deb ... Unpacking libasan8:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../04-liblsan0_14.2.0-16_amd64.deb ... Unpacking liblsan0:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../05-libtsan2_14.2.0-16_amd64.deb ... Unpacking libtsan2:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../06-libubsan1_14.2.0-16_amd64.deb ... Unpacking libubsan1:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../07-libhwasan0_14.2.0-16_amd64.deb ... Unpacking libhwasan0:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../08-libquadmath0_14.2.0-16_amd64.deb ... Unpacking libquadmath0:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../09-gcc-14_14.2.0-16_amd64.deb ... Unpacking gcc-14 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../10-g++-14_14.2.0-16_amd64.deb ... Unpacking g++-14 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../11-g++-14-x86-64-linux-gnu_14.2.0-16_amd64.deb ... Unpacking g++-14-x86-64-linux-gnu (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../12-libstdc++-14-dev_14.2.0-16_amd64.deb ... Unpacking libstdc++-14-dev:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../13-libgcc-14-dev_14.2.0-16_amd64.deb ... Unpacking libgcc-14-dev:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../14-gcc-14-x86-64-linux-gnu_14.2.0-16_amd64.deb ... Unpacking gcc-14-x86-64-linux-gnu (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../15-cpp-14-x86-64-linux-gnu_14.2.0-16_amd64.deb ... Unpacking cpp-14-x86-64-linux-gnu (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../16-cpp-14_14.2.0-16_amd64.deb ... Unpacking cpp-14 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../17-libgfortran5_14.2.0-16_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../18-libstdc++6_14.2.0-16_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-16) over (14.2.0-12) ... Setting up libstdc++6:amd64 (14.2.0-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.28_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.28) over (2.9.27) ... Setting up libapt-pkg6.0t64:amd64 (2.9.28) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../archives/sqv_1.2.1-6_amd64.deb ... Unpacking sqv (1.2.1-6) over (1.2.1-5) ... Setting up sqv (1.2.1-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.28_amd64.deb ... Unpacking apt (2.9.28) over (2.9.27) ... Setting up apt (2.9.28) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../00-login_1%3a4.16.0-2+really2.40.4-3_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.4-3) over (1:4.16.0-2+really2.40.4-2) ... Preparing to unpack .../01-python3.12-dev_3.12.9-1_amd64.deb ... Unpacking python3.12-dev (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../02-libpython3.12-dev_3.12.9-1_amd64.deb ... Unpacking libpython3.12-dev:amd64 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../03-libpython3.12t64_3.12.9-1_amd64.deb ... Unpacking libpython3.12t64:amd64 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../04-python3.12_3.12.9-1_amd64.deb ... Unpacking python3.12 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../05-libpython3.12-stdlib_3.12.9-1_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../06-python3.12-minimal_3.12.9-1_amd64.deb ... Unpacking python3.12-minimal (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../07-libpython3.12-minimal_3.12.9-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../08-media-types_11.0.0_all.deb ... Unpacking media-types (11.0.0) over (10.1.0) ... Preparing to unpack .../09-tzdata_2025a-2_all.deb ... Unpacking tzdata (2025a-2) over (2024b-6) ... Preparing to unpack .../10-python3.13-dev_3.13.2-1_amd64.deb ... Unpacking python3.13-dev (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../11-libpython3.13-dev_3.13.2-1_amd64.deb ... Unpacking libpython3.13-dev:amd64 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../12-libpython3.13_3.13.2-1_amd64.deb ... Unpacking libpython3.13:amd64 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../13-python3.13_3.13.2-1_amd64.deb ... Unpacking python3.13 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../14-libpython3.13-stdlib_3.13.2-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../15-python3.13-minimal_3.13.2-1_amd64.deb ... Unpacking python3.13-minimal (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../16-libpython3.13-minimal_3.13.2-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../17-libsepol2_3.8-1_amd64.deb ... Unpacking libsepol2:amd64 (3.8-1) over (3.7-1) ... Setting up libsepol2:amd64 (3.8-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55426 files and directories currently installed.) Preparing to unpack .../00-libglib2.0-0t64_2.83.3-2_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.83.3-2) over (2.82.4-2) ... Preparing to unpack .../01-libhts3t64_1.21+ds-1_amd64.deb ... Unpacking libhts3t64:amd64 (1.21+ds-1) over (1.20+ds-2) ... Preparing to unpack .../02-libldap-2.5-0_2.5.19+dfsg-1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.19+dfsg-1) over (2.5.13+dfsg-5) ... Preparing to unpack .../03-libopenblas-pthread-dev_0.3.29+ds-2_amd64.deb ... Unpacking libopenblas-pthread-dev:amd64 (0.3.29+ds-2) over (0.3.28+ds-4) ... Preparing to unpack .../04-libopenblas0-pthread_0.3.29+ds-2_amd64.deb ... Unpacking libopenblas0-pthread:amd64 (0.3.29+ds-2) over (0.3.28+ds-4) ... Preparing to unpack .../05-libopenblas-dev_0.3.29+ds-2_amd64.deb ... Unpacking libopenblas-dev:amd64 (0.3.29+ds-2) over (0.3.28+ds-4) ... Preparing to unpack .../06-libopenblas0_0.3.29+ds-2_amd64.deb ... Unpacking libopenblas0:amd64 (0.3.29+ds-2) over (0.3.28+ds-4) ... Preparing to unpack .../07-libtasn1-6_4.20.0-1_amd64.deb ... Unpacking libtasn1-6:amd64 (4.20.0-1) over (4.19.0-3+b3) ... Preparing to unpack .../08-python3-appdirs_1.4.4-4_all.deb ... Unpacking python3-appdirs (1.4.4-4) over (1.4.4-3) ... Preparing to unpack .../09-python3-biopython_1.85+dfsg-2_amd64.deb ... Unpacking python3-biopython (1.85+dfsg-2) over (1.84+dfsg-4+b2) ... Preparing to unpack .../10-python3-numpy_1%3a2.2.2+ds-2_amd64.deb ... Unpacking python3-numpy (1:2.2.2+ds-2) over (1:1.26.4+ds-13) ... Selecting previously unselected package python3-numpy-dev:amd64. Preparing to unpack .../11-python3-numpy-dev_1%3a2.2.2+ds-2_amd64.deb ... Unpacking python3-numpy-dev:amd64 (1:2.2.2+ds-2) ... Preparing to unpack .../12-python3-pil.imagetk_11.1.0-5_amd64.deb ... Unpacking python3-pil.imagetk:amd64 (11.1.0-5) over (10.4.0-1.1) ... Preparing to unpack .../13-python3-pil_11.1.0-5_amd64.deb ... Unpacking python3-pil:amd64 (11.1.0-5) over (10.4.0-1.1) ... Preparing to unpack .../14-python3-pysam_0.23.0+ds-1_amd64.deb ... Unpacking python3-pysam (0.23.0+ds-1) over (0.22.1+ds-2+b2) ... Selecting previously unselected package python3-pytz. Preparing to unpack .../15-python3-pytz_2025.1-2_all.deb ... Unpacking python3-pytz (2025.1-2) ... dpkg: error processing archive /tmp/apt-dpkg-install-oC6BwD/15-python3-pytz_2025.1-2_all.deb (--unpack): trying to overwrite '/usr/lib/python3/dist-packages/pytz/__init__.py', which is also in package python3-tz (2024.2-1) Preparing to unpack .../16-python3-sympy_1.13.3-2_all.deb ... Unpacking python3-sympy (1.13.3-2) over (1.13.3-1) ... Preparing to unpack .../17-python3-tz_2025.1-2_all.deb ... Unpacking python3-tz (2025.1-2) over (2024.2-1) ... Preparing to unpack .../18-python3.12-tk_3.12.9-1_amd64.deb ... Unpacking python3.12-tk (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../19-python3.13-tk_3.13.2-1_amd64.deb ... Unpacking python3.13-tk (3.13.2-1) over (3.13.1-3+b1) ... Errors were encountered while processing: /tmp/apt-dpkg-install-oC6BwD/15-python3-pytz_2025.1-2_all.deb E: Sub-process /usr/bin/dpkg returned an error code (1) 2m11.8s ERROR: Command failed (status=100): ['chroot', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi', 'apt-get', '-yf', 'dist-upgrade'] Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libboost-dev libboost1.83-dev libfile-find-rule-perl libfmt7 libfmt9 libldap-2.4-2 libldap-2.5-0 libmpdec3 libnsl-dev libnumber-compare-perl libopenblas-dev libopenblas-pthread-dev libopenblas0 libperl5.32 libperl5.36 libpython3-all-dev libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.12-dev libpython3.12t64 libpython3.9-minimal libpython3.9-stdlib libtext-glob-perl libtiff5 libtirpc-dev libwebp6 libxsimd-dev perl-modules-5.32 perl-modules-5.36 python3-all-dev python3-appdirs python3-beniget python3-colorama python3-colorlog python3-easydev python3-gast python3-lib2to3 python3-line-profiler python3-pexpect python3-ply python3-ptyprocess python3-pythran python3-six python3.11 python3.11-dev python3.11-minimal python3.12-dev python3.9 python3.9-minimal ttf-bitstream-vera usrmerge xtl-dev Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: python3-numpy-dev python3-pytz The following packages will be upgraded: apt bsdutils cpp-14 cpp-14-x86-64-linux-gnu g++-14 g++-14-x86-64-linux-gnu gcc-14 gcc-14-base gcc-14-x86-64-linux-gnu libapt-pkg6.0t64 libasan8 libatomic1 libblkid1 libcc1-0 libgcc-14-dev libgcc-s1 libgfortran5 libglib2.0-0t64 libgomp1 libhts3t64 libhwasan0 libitm1 libldap-2.5-0 liblsan0 libmount1 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libpcre2-8-0 libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libquadmath0 libselinux1 libsepol2 libsmartcols1 libstdc++-14-dev libstdc++6 libtasn1-6 libtsan2 libubsan1 libuuid1 login media-types mount python3-appdirs python3-biopython python3-numpy python3-pil python3-pil.imagetk python3-pysam python3-sympy python3-tz python3.12 python3.12-dev python3.12-minimal python3.12-tk python3.13 python3.13-dev python3.13-minimal python3.13-tk sqv tzdata util-linux util-linux-extra 71 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 128 MB of archives. After this operation, 8626 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.40.4-3 [106 kB] Get:2 http://deb.debian.org/debian sid/main amd64 util-linux-extra amd64 2.40.4-3 [266 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.40.4-3 [36.3 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.40.4-3 [169 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.40.4-3 [200 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.40.4-3 [140 kB] Get:7 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.40.4-3 [1214 kB] Get:8 http://deb.debian.org/debian sid/main amd64 mount amd64 2.40.4-3 [155 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libpcre2-8-0 amd64 10.45-1 [298 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libselinux1 amd64 3.8-1 [84.3 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libcc1-0 amd64 14.2.0-16 [42.8 kB] Get:12 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-16 [48.9 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-16 [72.8 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 14.2.0-16 [137 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libitm1 amd64 14.2.0-16 [25.9 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 14.2.0-16 [9296 B] Get:17 http://deb.debian.org/debian sid/main amd64 libasan8 amd64 14.2.0-16 [2729 kB] Get:18 http://deb.debian.org/debian sid/main amd64 liblsan0 amd64 14.2.0-16 [1205 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libtsan2 amd64 14.2.0-16 [2461 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libubsan1 amd64 14.2.0-16 [1075 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libhwasan0 amd64 14.2.0-16 [1489 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 14.2.0-16 [145 kB] Get:23 http://deb.debian.org/debian sid/main amd64 gcc-14 amd64 14.2.0-16 [537 kB] Get:24 http://deb.debian.org/debian sid/main amd64 g++-14 amd64 14.2.0-16 [21.8 kB] Get:25 http://deb.debian.org/debian sid/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-16 [12.1 MB] Get:26 http://deb.debian.org/debian sid/main amd64 libstdc++-14-dev amd64 14.2.0-16 [2373 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libgcc-14-dev amd64 14.2.0-16 [2671 kB] Get:28 http://deb.debian.org/debian sid/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-16 [21.4 MB] Get:29 http://deb.debian.org/debian sid/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-16 [11.1 MB] Get:30 http://deb.debian.org/debian sid/main amd64 cpp-14 amd64 14.2.0-16 [1276 B] Get:31 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14.2.0-16 [836 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-16 [713 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libapt-pkg6.0t64 amd64 2.9.28 [1119 kB] Get:34 http://deb.debian.org/debian sid/main amd64 sqv amd64 1.2.1-6 [623 kB] Get:35 http://deb.debian.org/debian sid/main amd64 apt amd64 2.9.28 [1440 kB] Get:36 http://deb.debian.org/debian sid/main amd64 login amd64 1:4.16.0-2+really2.40.4-3 [88.5 kB] Get:37 http://deb.debian.org/debian sid/main amd64 python3.12-dev amd64 3.12.9-1 [505 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libpython3.12-dev amd64 3.12.9-1 [5125 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libpython3.12t64 amd64 3.12.9-1 [2151 kB] Get:40 http://deb.debian.org/debian sid/main amd64 python3.12 amd64 3.12.9-1 [681 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libpython3.12-stdlib amd64 3.12.9-1 [1974 kB] Get:42 http://deb.debian.org/debian sid/main amd64 python3.12-minimal amd64 3.12.9-1 [2163 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libpython3.12-minimal amd64 3.12.9-1 [817 kB] Get:44 http://deb.debian.org/debian sid/main amd64 media-types all 11.0.0 [27.6 kB] Get:45 http://deb.debian.org/debian sid/main amd64 tzdata all 2025a-2 [259 kB] Get:46 http://deb.debian.org/debian sid/main amd64 python3.13-dev amd64 3.13.2-1 [507 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libpython3.13-dev amd64 3.13.2-1 [5005 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libpython3.13 amd64 3.13.2-1 [2151 kB] Get:49 http://deb.debian.org/debian sid/main amd64 python3.13 amd64 3.13.2-1 [745 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB] Get:51 http://deb.debian.org/debian sid/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB] Get:52 http://deb.debian.org/debian sid/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libsepol2 amd64 3.8-1 [296 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libglib2.0-0t64 amd64 2.83.3-2 [1511 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libhts3t64 amd64 1.21+ds-1 [463 kB] Get:56 http://deb.debian.org/debian sid/main amd64 libldap-2.5-0 amd64 2.5.19+dfsg-1 [187 kB] Get:57 http://deb.debian.org/debian sid/main amd64 libopenblas-pthread-dev amd64 0.3.29+ds-2 [5062 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libopenblas0-pthread amd64 0.3.29+ds-2 [6737 kB] Get:59 http://deb.debian.org/debian sid/main amd64 libopenblas-dev amd64 0.3.29+ds-2 [56.9 kB] Get:60 http://deb.debian.org/debian sid/main amd64 libopenblas0 amd64 0.3.29+ds-2 [42.6 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libtasn1-6 amd64 4.20.0-1 [49.9 kB] Get:62 http://deb.debian.org/debian sid/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get:63 http://deb.debian.org/debian sid/main amd64 python3-biopython amd64 1.85+dfsg-2 [1674 kB] Get:64 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:2.2.2+ds-2 [7507 kB] Get:65 http://deb.debian.org/debian sid/main amd64 python3-numpy-dev amd64 1:2.2.2+ds-2 [138 kB] Get:66 http://deb.debian.org/debian sid/main amd64 python3-pil.imagetk amd64 11.1.0-5 [81.5 kB] Get:67 http://deb.debian.org/debian sid/main amd64 python3-pil amd64 11.1.0-5 [531 kB] Get:68 http://deb.debian.org/debian sid/main amd64 python3-pysam amd64 0.23.0+ds-1 [4527 kB] Get:69 http://deb.debian.org/debian sid/main amd64 python3-pytz all 2025.1-2 [150 kB] Get:70 http://deb.debian.org/debian sid/main amd64 python3-sympy all 1.13.3-2 [4148 kB] Get:71 http://deb.debian.org/debian sid/main amd64 python3-tz all 2025.1-2 [3972 B] Get:72 http://deb.debian.org/debian sid/main amd64 python3.12-tk amd64 3.12.9-1 [113 kB] Get:73 http://deb.debian.org/debian sid/main amd64 python3.13-tk amd64 3.13.2-1 [103 kB] Preconfiguring packages ... Fetched 128 MB in 1s (217 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.4-3_amd64.deb ... Unpacking bsdutils (1:2.40.4-3) over (1:2.40.4-2) ... Setting up bsdutils (1:2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../util-linux-extra_2.40.4-3_amd64.deb ... Leaving 'diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra' Unpacking util-linux-extra (2.40.4-3) over (2.40.4-2) ... Preparing to unpack .../libuuid1_2.40.4-3_amd64.deb ... Unpacking libuuid1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libuuid1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libblkid1_2.40.4-3_amd64.deb ... Unpacking libblkid1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libblkid1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.4-3_amd64.deb ... Unpacking libmount1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libmount1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.4-3_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libsmartcols1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.4-3_amd64.deb ... Unpacking util-linux (2.40.4-3) over (2.40.4-2) ... Setting up util-linux (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../mount_2.40.4-3_amd64.deb ... Unpacking mount (2.40.4-3) over (2.40.4-2) ... Preparing to unpack .../libpcre2-8-0_10.45-1_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.45-1) over (10.44-5) ... Setting up libpcre2-8-0:amd64 (10.45-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libselinux1_3.8-1_amd64.deb ... Unpacking libselinux1:amd64 (3.8-1) over (3.7-3.1) ... Setting up libselinux1:amd64 (3.8-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libcc1-0_14.2.0-16_amd64.deb ... Unpacking libcc1-0:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../gcc-14-base_14.2.0-16_amd64.deb ... Unpacking gcc-14-base:amd64 (14.2.0-16) over (14.2.0-12) ... Setting up gcc-14-base:amd64 (14.2.0-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14.2.0-16_amd64.deb ... Unpacking libgcc-s1:amd64 (14.2.0-16) over (14.2.0-12) ... Setting up libgcc-s1:amd64 (14.2.0-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../00-libgomp1_14.2.0-16_amd64.deb ... Unpacking libgomp1:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../01-libitm1_14.2.0-16_amd64.deb ... Unpacking libitm1:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../02-libatomic1_14.2.0-16_amd64.deb ... Unpacking libatomic1:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../03-libasan8_14.2.0-16_amd64.deb ... Unpacking libasan8:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../04-liblsan0_14.2.0-16_amd64.deb ... Unpacking liblsan0:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../05-libtsan2_14.2.0-16_amd64.deb ... Unpacking libtsan2:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../06-libubsan1_14.2.0-16_amd64.deb ... Unpacking libubsan1:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../07-libhwasan0_14.2.0-16_amd64.deb ... Unpacking libhwasan0:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../08-libquadmath0_14.2.0-16_amd64.deb ... Unpacking libquadmath0:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../09-gcc-14_14.2.0-16_amd64.deb ... Unpacking gcc-14 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../10-g++-14_14.2.0-16_amd64.deb ... Unpacking g++-14 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../11-g++-14-x86-64-linux-gnu_14.2.0-16_amd64.deb ... Unpacking g++-14-x86-64-linux-gnu (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../12-libstdc++-14-dev_14.2.0-16_amd64.deb ... Unpacking libstdc++-14-dev:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../13-libgcc-14-dev_14.2.0-16_amd64.deb ... Unpacking libgcc-14-dev:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../14-gcc-14-x86-64-linux-gnu_14.2.0-16_amd64.deb ... Unpacking gcc-14-x86-64-linux-gnu (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../15-cpp-14-x86-64-linux-gnu_14.2.0-16_amd64.deb ... Unpacking cpp-14-x86-64-linux-gnu (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../16-cpp-14_14.2.0-16_amd64.deb ... Unpacking cpp-14 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../17-libgfortran5_14.2.0-16_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-16) over (14.2.0-12) ... Preparing to unpack .../18-libstdc++6_14.2.0-16_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-16) over (14.2.0-12) ... Setting up libstdc++6:amd64 (14.2.0-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.28_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.28) over (2.9.27) ... Setting up libapt-pkg6.0t64:amd64 (2.9.28) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../archives/sqv_1.2.1-6_amd64.deb ... Unpacking sqv (1.2.1-6) over (1.2.1-5) ... Setting up sqv (1.2.1-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.28_amd64.deb ... Unpacking apt (2.9.28) over (2.9.27) ... Setting up apt (2.9.28) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55432 files and directories currently installed.) Preparing to unpack .../00-login_1%3a4.16.0-2+really2.40.4-3_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.4-3) over (1:4.16.0-2+really2.40.4-2) ... Preparing to unpack .../01-python3.12-dev_3.12.9-1_amd64.deb ... Unpacking python3.12-dev (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../02-libpython3.12-dev_3.12.9-1_amd64.deb ... Unpacking libpython3.12-dev:amd64 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../03-libpython3.12t64_3.12.9-1_amd64.deb ... Unpacking libpython3.12t64:amd64 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../04-python3.12_3.12.9-1_amd64.deb ... Unpacking python3.12 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../05-libpython3.12-stdlib_3.12.9-1_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../06-python3.12-minimal_3.12.9-1_amd64.deb ... Unpacking python3.12-minimal (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../07-libpython3.12-minimal_3.12.9-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../08-media-types_11.0.0_all.deb ... Unpacking media-types (11.0.0) over (10.1.0) ... Preparing to unpack .../09-tzdata_2025a-2_all.deb ... Unpacking tzdata (2025a-2) over (2024b-6) ... Preparing to unpack .../10-python3.13-dev_3.13.2-1_amd64.deb ... Unpacking python3.13-dev (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../11-libpython3.13-dev_3.13.2-1_amd64.deb ... Unpacking libpython3.13-dev:amd64 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../12-libpython3.13_3.13.2-1_amd64.deb ... Unpacking libpython3.13:amd64 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../13-python3.13_3.13.2-1_amd64.deb ... Unpacking python3.13 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../14-libpython3.13-stdlib_3.13.2-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../15-python3.13-minimal_3.13.2-1_amd64.deb ... Unpacking python3.13-minimal (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../16-libpython3.13-minimal_3.13.2-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.2-1) over (3.13.1-3+b1) ... Preparing to unpack .../17-libsepol2_3.8-1_amd64.deb ... Unpacking libsepol2:amd64 (3.8-1) over (3.7-1) ... Setting up libsepol2:amd64 (3.8-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55426 files and directories currently installed.) Preparing to unpack .../00-libglib2.0-0t64_2.83.3-2_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.83.3-2) over (2.82.4-2) ... Preparing to unpack .../01-libhts3t64_1.21+ds-1_amd64.deb ... Unpacking libhts3t64:amd64 (1.21+ds-1) over (1.20+ds-2) ... Preparing to unpack .../02-libldap-2.5-0_2.5.19+dfsg-1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.19+dfsg-1) over (2.5.13+dfsg-5) ... Preparing to unpack .../03-libopenblas-pthread-dev_0.3.29+ds-2_amd64.deb ... Unpacking libopenblas-pthread-dev:amd64 (0.3.29+ds-2) over (0.3.28+ds-4) ... Preparing to unpack .../04-libopenblas0-pthread_0.3.29+ds-2_amd64.deb ... Unpacking libopenblas0-pthread:amd64 (0.3.29+ds-2) over (0.3.28+ds-4) ... Preparing to unpack .../05-libopenblas-dev_0.3.29+ds-2_amd64.deb ... Unpacking libopenblas-dev:amd64 (0.3.29+ds-2) over (0.3.28+ds-4) ... Preparing to unpack .../06-libopenblas0_0.3.29+ds-2_amd64.deb ... Unpacking libopenblas0:amd64 (0.3.29+ds-2) over (0.3.28+ds-4) ... Preparing to unpack .../07-libtasn1-6_4.20.0-1_amd64.deb ... Unpacking libtasn1-6:amd64 (4.20.0-1) over (4.19.0-3+b3) ... Preparing to unpack .../08-python3-appdirs_1.4.4-4_all.deb ... Unpacking python3-appdirs (1.4.4-4) over (1.4.4-3) ... Preparing to unpack .../09-python3-biopython_1.85+dfsg-2_amd64.deb ... Unpacking python3-biopython (1.85+dfsg-2) over (1.84+dfsg-4+b2) ... Preparing to unpack .../10-python3-numpy_1%3a2.2.2+ds-2_amd64.deb ... Unpacking python3-numpy (1:2.2.2+ds-2) over (1:1.26.4+ds-13) ... Selecting previously unselected package python3-numpy-dev:amd64. Preparing to unpack .../11-python3-numpy-dev_1%3a2.2.2+ds-2_amd64.deb ... Unpacking python3-numpy-dev:amd64 (1:2.2.2+ds-2) ... Preparing to unpack .../12-python3-pil.imagetk_11.1.0-5_amd64.deb ... Unpacking python3-pil.imagetk:amd64 (11.1.0-5) over (10.4.0-1.1) ... Preparing to unpack .../13-python3-pil_11.1.0-5_amd64.deb ... Unpacking python3-pil:amd64 (11.1.0-5) over (10.4.0-1.1) ... Preparing to unpack .../14-python3-pysam_0.23.0+ds-1_amd64.deb ... Unpacking python3-pysam (0.23.0+ds-1) over (0.22.1+ds-2+b2) ... Selecting previously unselected package python3-pytz. Preparing to unpack .../15-python3-pytz_2025.1-2_all.deb ... Unpacking python3-pytz (2025.1-2) ... dpkg: error processing archive /tmp/apt-dpkg-install-oC6BwD/15-python3-pytz_2025.1-2_all.deb (--unpack): trying to overwrite '/usr/lib/python3/dist-packages/pytz/__init__.py', which is also in package python3-tz (2024.2-1) Preparing to unpack .../16-python3-sympy_1.13.3-2_all.deb ... Unpacking python3-sympy (1.13.3-2) over (1.13.3-1) ... Preparing to unpack .../17-python3-tz_2025.1-2_all.deb ... Unpacking python3-tz (2025.1-2) over (2024.2-1) ... Preparing to unpack .../18-python3.12-tk_3.12.9-1_amd64.deb ... Unpacking python3.12-tk (3.12.9-1) over (3.12.8-5+b1) ... Preparing to unpack .../19-python3.13-tk_3.13.2-1_amd64.deb ... Unpacking python3.13-tk (3.13.2-1) over (3.13.1-3+b1) ... Errors were encountered while processing: /tmp/apt-dpkg-install-oC6BwD/15-python3-pytz_2025.1-2_all.deb E: Sub-process /usr/bin/dpkg returned an error code (1) 2m13.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/shm'] 2m13.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/shm'] 2m13.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/console'] 2m13.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/console'] 2m13.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/ptmx'] 2m13.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/ptmx'] 2m13.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/pts'] 2m13.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/dev/pts'] 2m13.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/proc'] 2m13.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi/proc'] 2m13.4s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 2m14.2s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpuk_9m0zi'] 2m14.2s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpuk_9m0zi 2m14.2s ERROR: piuparts run ends. ret=1 End: 2025-02-09 16:38:59 GMT