Start: 2024-11-17 09:42:37 GMT [oldstable] Package: python3-biom-format Source: python-biom-format (2.1.10-1) Version: 2.1.10-1+b1 Installed-Size: 737 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: biom-format-tools (<< 2.1.7+dfsg-3) Provides: biom-format-tools Depends: python3-h5py, python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, cython3, python3 (<< 3.10), python3 (>= 3.9~), python3-click, python3-future, python3-h5py-serial, python3-pandas, python3-scipy, python3-six (>= 1.10.0), python3:any, libc6 (>= 2.4) Suggests: python-biom-format-doc Breaks: biom-format-tools (<< 2.1.7+dfsg-3) Description: Biological Observation Matrix (BIOM) format (Python 3) Homepage: https://biom-format.org/ Description-md5: a8e1165fb97cc05bc8c23295225341cd Section: python Priority: optional Filename: pool/main/p/python-biom-format/python3-biom-format_2.1.10-1+b1_amd64.deb Size: 131572 MD5sum: 03cee6a83ffa0564bd0cb56e1b608638 SHA256: fd922d8dd525a5ffd6889c206da7390af4ed478eb42dcc74610b4219a2891242 [stable] Package: python3-biom-format Source: python-biom-format (2.1.12-3) Version: 2.1.12-3+b1 Installed-Size: 738 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: biom-format-tools (<< 2.1.7+dfsg-3) Provides: biom-format-tools Depends: python3-h5py, python3-numpy (>= 1:1.22.0), python3-numpy-abi9, cython3, python3 (<< 3.12), python3 (>= 3.11~), python3-click, python3-pandas, python3-scipy, python3:any, libc6 (>= 2.4) Suggests: python-biom-format-doc Breaks: biom-format-tools (<< 2.1.7+dfsg-3) Description: Biological Observation Matrix (BIOM) format (Python 3) Homepage: https://biom-format.org/ Description-md5: a8e1165fb97cc05bc8c23295225341cd Section: python Priority: optional Filename: pool/main/p/python-biom-format/python3-biom-format_2.1.12-3+b1_amd64.deb Size: 128444 MD5sum: 787583840e9cb0b94628105ddf601286 SHA256: 82015644e695b13e8388f42e2cdca11469f7a7177b67d46e898e9a8486777df2 [testing] Package: python3-biom-format Source: python-biom-format (2.1.16-1) Version: 2.1.16-1+b2 Installed-Size: 1140 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: biom-format-tools Depends: python3-h5py, python3-numpy (>= 1:1.25.0), python3-numpy-abi9, python3 (<< 3.14), python3 (>= 3.12~), python3-click, python3-pandas, python3-scipy, python3:any, libc6 (>= 2.4) Suggests: python-biom-format-doc Description: Biological Observation Matrix (BIOM) format (Python 3) Homepage: https://biom-format.org/ Description-md5: a8e1165fb97cc05bc8c23295225341cd Section: python Priority: optional Filename: pool/main/p/python-biom-format/python3-biom-format_2.1.16-1+b2_amd64.deb Size: 175612 MD5sum: 2d13a2e68a72541ffd216bf24f3e7eef SHA256: 2dab44fe0bde84d73dcfd8b40c84fc43d1c37466a2ca056e2c0e65685bf232af Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d oldstable -d stable -d testing -B /srv/piuparts.debian.org/slave/refchroot/oldstable22testing/reference-chroot-metadata.dat --apt python3-biom-format=2.1.16-1+b2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz -d oldstable -d stable -d testing -B /srv/piuparts.debian.org/slave/refchroot/oldstable22testing/reference-chroot-metadata.dat --apt python3-biom-format=2.1.16-1+b2 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpt1yt0tc0 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpt1yt0tc0 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bullseye-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/proc'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/proc'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/pts'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/pts'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/ptmx'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/ptmx'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/console'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/console'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/shm'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/shm'] 0m0.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m0.3s DEBUG: Created policy-rc.d and chmodded it. 0m0.3s DEBUG: Created resolv.conf. 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpt1yt0tc0/tmp/scripts/ 0m0.3s INFO: Running scripts post_chroot_unpack 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'update'] 0m0.8s DUMP: Hit:1 http://deb.debian.org/debian bullseye InRelease Reading package lists... 0m0.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'update'] 0m0.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-yf', 'dist-upgrade'] 0m1.0s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m1.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-yf', 'dist-upgrade'] 0m1.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m1.2s DUMP: f58ca9ba0b3223edf5b7797c101a5448 - 0m1.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m1.2s INFO: Running scripts post_setup 0m1.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_dummy_users'] 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_dummy_users'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_forbid_home'] 0m2.1s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_forbid_home'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.1s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_minimize'] 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_minimize'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_zz_backports'] 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_setup_zz_backports'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.1s DUMP: install ok installed adduser adduser 3.118+deb11u1 install ok installed apt apt 2.2.4 install ok installed base-files base-files 11.1+deb11u11 install ok installed base-passwd base-passwd 3.5.51 install ok installed bash bash 5.1-2+deb11u1 install ok installed bsdutils bsdutils 1:2.36.1-8+deb11u2 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-5 install ok installed debconf debconf 1.5.77 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1+deb11u1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-5 install ok installed dpkg dpkg 1.20.13 install ok installed e2fsprogs e2fsprogs 1.46.2-2 install ok installed findutils findutils 4.8.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-22 install ok installed gpgv gpgv 2.2.27-2+deb11u2 install ok installed grep grep 3.6-1+deb11u1 install ok installed gzip gzip 1.10-4+deb11u1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.60 install ok installed libacl1:amd64 libacl1 2.2.53-10 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.2.4 install ok installed libattr1:amd64 libattr1 1:2.4.48-6 install ok installed libaudit-common libaudit-common 1:3.0-2 install ok installed libaudit1:amd64 libaudit1 1:3.0-2 install ok installed libblkid1:amd64 libblkid1 2.36.1-8+deb11u2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-13+deb11u11 install ok installed libc6:amd64 libc6 2.31-13+deb11u11 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcom-err2:amd64 libcom-err2 1.46.2-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.18-4 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.8 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.260 install ok installed libext2fs2:amd64 libext2fs2 1.46.2-2 install ok installed libffi7:amd64 libffi7 3.3-6 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.1-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-6 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1+deb11u1 install ok installed libgnutls30:amd64 libgnutls30 3.7.1-5+deb11u5 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-6+deb11u5 install ok installed libhogweed6:amd64 libhogweed6 3.7.3-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-5 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-6+deb11u5 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-6+deb11u5 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-6+deb11u5 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1~deb11u1 install ok installed libmount1:amd64 libmount1 2.36.1-8+deb11u2 install ok installed libnettle8:amd64 libnettle8 3.7.3-1 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.22-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-9+deb11u1 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-9+deb11u1 install ok installed libpam-runtime libpam-runtime 1.4.0-9+deb11u1 install ok installed libpam0g:amd64 libpam0g 1.4.0-9+deb11u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.36-2+deb11u1 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.5.1-1+deb11u1 install ok installed libselinux1:amd64 libselinux1 3.1-3 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b2 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-8+deb11u2 install ok installed libss2:amd64 libss2 1.46.2-2 install ok installed libssl1.1:amd64 libssl1.1 1.1.1w-0+deb11u1 install ok installed libstdc++6:amd64 libstdc++6 10.2.1-6 install ok installed libsystemd0:amd64 libsystemd0 247.3-7+deb11u5 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2+deb11u1 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-2+deb11u2 install ok installed libtirpc-common libtirpc-common 1.3.1-1+deb11u1 install ok installed libtirpc3:amd64 libtirpc3 1.3.1-1+deb11u1 install ok installed libudev1:amd64 libudev1 247.3-7+deb11u5 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-8+deb11u2 install ok installed libxxhash0:amd64 libxxhash0 0.8.0-2 install ok installed libzstd1:amd64 libzstd1 1.4.8+dfsg-2.1 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.46.2-2 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36.1-8+deb11u2 install ok installed ncurses-base ncurses-base 6.2+20201114-2+deb11u2 install ok installed ncurses-bin ncurses-bin 6.2+20201114-2+deb11u2 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.32.1-4+deb11u3 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-7+deb11u1 install ok installed tar tar 1.34+dfsg-1+deb11u1 install ok installed tzdata tzdata 2024a-0+deb11u1 install ok installed util-linux util-linux 2.36.1-8+deb11u2 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2+deb11u2 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.1s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/oldstable22testing/reference-chroot-metadata.dat 0m2.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 0m2.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 0m2.5s INFO: Running scripts is_testable 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/is_testable_uninstallable'] 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/is_testable_uninstallable'] 0m2.5s INFO: Running scripts pre_test 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_test_exceptions'] 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_test_exceptions'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_test_root_password'] 0m2.5s DUMP: New password: Retype new password: passwd: password updated successfully 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_test_root_password'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'show', '--no-all-versions', 'python3-biom-format'] 0m2.6s DUMP: Package: python3-biom-format Source: python-biom-format (2.1.10-1) Version: 2.1.10-1+b1 Installed-Size: 737 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: biom-format-tools (<< 2.1.7+dfsg-3) Provides: biom-format-tools Depends: python3-h5py, python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, cython3, python3 (<< 3.10), python3 (>= 3.9~), python3-click, python3-future, python3-h5py-serial, python3-pandas, python3-scipy, python3-six (>= 1.10.0), python3:any, libc6 (>= 2.4) Suggests: python-biom-format-doc Breaks: biom-format-tools (<< 2.1.7+dfsg-3) Description-en: Biological Observation Matrix (BIOM) format (Python 3) The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . This package provides the BIOM format library for the Python 3 interpreter. Description-md5: a8e1165fb97cc05bc8c23295225341cd Homepage: https://biom-format.org/ Section: python Priority: optional Filename: pool/main/p/python-biom-format/python3-biom-format_2.1.10-1+b1_amd64.deb Size: 131572 MD5sum: 03cee6a83ffa0564bd0cb56e1b608638 SHA256: fd922d8dd525a5ffd6889c206da7390af4ed478eb42dcc74610b4219a2891242 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'show', '--no-all-versions', 'python3-biom-format'] 0m2.6s INFO: apt-cache knows about the following packages: python3-biom-format 0m2.6s INFO: Running scripts pre_install 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_database-server'] 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_database-server'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_exceptions'] 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_exceptions'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_extras'] 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_extras'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy'] 0m2.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release v=11.11,o=Debian,a=oldstable,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy'] 0m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy', 'python3-biom-format'] 0m2.7s DUMP: python3-biom-format: Installed: (none) Candidate: 2.1.10-1+b1 Version table: 2.1.10-1+b1 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 0m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy', 'python3-biom-format'] 0m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-y', 'install', 'python3-biom-format'] 0m13.6s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: cython3 libaec0 libblas3 libexpat1 libgfortran5 libhdf5-103-1 libhdf5-hl-100 liblapack3 liblbfgsb0 liblzf1 libmpdec3 libncursesw6 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 libsqlite3-0 libsz2 media-types python3 python3-click python3-colorama python3-dateutil python3-decorator python3-future python3-h5py python3-h5py-serial python3-lib2to3 python3-minimal python3-numpy python3-pandas python3-pandas-lib python3-pkg-resources python3-scipy python3-six python3-tz python3.9 python3.9-minimal readline-common Suggested packages: cython-doc python3-doc python3-tk python3-venv python-biom-format-doc python-future-doc python-h5py-doc gcc gfortran python-numpy-doc python3-dev python3-numpy-dbg python3-pytest python-pandas-doc python3-statsmodels python3-setuptools python-scipy-doc python3.9-venv python3.9-doc binutils binfmt-support readline-doc Recommended packages: python3-dev gcc libgpm2 ca-certificates python3-matplotlib python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-xlwt python3-bs4 python3-html5lib python3-lxml python3-tables python3-jinja2 python3-numba g++ | c++-compiler python3-pil The following NEW packages will be installed: cython3 libaec0 libblas3 libexpat1 libgfortran5 libhdf5-103-1 libhdf5-hl-100 liblapack3 liblbfgsb0 liblzf1 libmpdec3 libncursesw6 libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 libsqlite3-0 libsz2 media-types python3 python3-biom-format python3-click python3-colorama python3-dateutil python3-decorator python3-future python3-h5py python3-h5py-serial python3-lib2to3 python3-minimal python3-numpy python3-pandas python3-pandas-lib python3-pkg-resources python3-scipy python3-six python3-tz python3.9 python3.9-minimal readline-common 0 upgraded, 41 newly installed, 0 to remove and 0 not upgraded. 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Setting up liblapack3:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libreadline8:amd64 (8.1-1) ... Setting up libhdf5-103-1:amd64 (1.10.6+repack-4+deb11u1) ... Setting up libpython3.9-stdlib:amd64 (3.9.2-1) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.3-9) ... Setting up libhdf5-hl-100:amd64 (1.10.6+repack-4+deb11u1) ... Setting up python3.9 (3.9.2-1) ... Setting up python3 (3.9.2-3) ... Setting up python3-tz (2021.1-1) ... Setting up python3-six (1.16.0-2) ... Setting up python3-decorator (4.4.2-2) ... Setting up cython3 (0.29.21-3+b1) ... Setting up python3-dateutil (2.8.1-6) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up python3-colorama (0.4.4-1) ... Setting up python3-click (7.1.2-1) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up python3-future (0.18.2-5) ... update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python3-scipy (1.6.0-2) ... Setting up python3-pandas-lib:amd64 (1.1.5+dfsg-2) ... Setting up python3-h5py-serial (2.10.0-9+b2) ... Setting up python3-pandas (1.1.5+dfsg-2) ... Setting up python3-h5py (2.10.0-9) ... Setting up python3-biom-format (2.1.10-1+b1) ... Processing triggers for libc-bin (2.31-13+deb11u11) ... 0m13.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-y', 'install', 'python3-biom-format'] 0m13.6s INFO: Running scripts post_install 0m13.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_install_exceptions'] 0m13.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_install_exceptions'] 0m13.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 0m14.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 0m14.0s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpt1yt0tc0 to stable 0m14.0s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m14.0s INFO: Running scripts pre_distupgrade 0m14.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'update'] 0m16.0s DUMP: Get:1 http://deb.debian.org/debian bookworm InRelease [151 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 Packages [8789 kB] Get:3 http://deb.debian.org/debian bookworm/main Translation-en [6109 kB] Fetched 15.0 MB in 2s (10.0 MB/s) Reading package lists... 0m16.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'update'] 0m16.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-yf', 'dist-upgrade'] 0m47.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libmpdec3 libpython3.9-minimal libpython3.9-stdlib python3-future python3.9 python3.9-minimal Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libsemanage1 The following NEW packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-12 g++ g++-12 gcc gcc-12 gcc-12-base libasan8 libatomic1 libbinutils libboost-dev libboost1.74-dev libbrotli1 libc-dev-bin libc6-dev libcap2 libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libcurl4 libexpat1-dev libffi8 libfile-find-rule-perl libgcc-12-dev libgdbm-compat4 libgdbm6 libgomp1 libgprofng0 libisl23 libitm1 libjansson4 libjs-jquery libjs-sphinxdoc libjs-underscore libldap-2.5-0 liblsan0 libmd0 libmpc3 libmpfr6 libnghttp2-14 libnsl-dev libnumber-compare-perl libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libperl5.36 libpsl5 libpython3-all-dev libpython3-dev libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib librtmp1 libsasl2-2 libsasl2-modules-db libsemanage2 libsepol2 libssh2-1 libssl3 libstdc++-12-dev libtext-glob-perl libtirpc-dev libtsan2 libubsan1 libxsimd-dev linux-libc-dev perl perl-modules-5.36 python3-all python3-all-dev python3-beniget python3-dev python3-distutils python3-gast python3-ply python3-pythran python3.11 python3.11-dev python3.11-minimal rpcsvc-proto usrmerge util-linux-extra zlib1g-dev The following packages will be upgraded: adduser apt base-files base-passwd bash bsdutils coreutils cython3 dash debconf debian-archive-keyring debianutils diffutils dpkg e2fsprogs findutils gpgv grep gzip hostname init-system-helpers libacl1 libaec0 libapt-pkg6.0 libattr1 libaudit-common libaudit1 libblas3 libblkid1 libbz2-1.0 libc-bin libc6 libcap-ng0 libcom-err2 libcrypt1 libdb5.3 libdebconfclient0 libexpat1 libext2fs2 libgcc-s1 libgcrypt20 libgfortran5 libgmp10 libgnutls30 libgpg-error0 libgssapi-krb5-2 libhdf5-103-1 libhdf5-hl-100 libhogweed6 libidn2-0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblz4-1 liblzma5 libmount1 libncursesw6 libnettle8 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libpcre3 libpython3-stdlib libquadmath0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsmartcols1 libsqlite3-0 libss2 libstdc++6 libsystemd0 libsz2 libtasn1-6 libtinfo6 libtirpc-common libtirpc3 libudev1 libunistring2 libuuid1 libxxhash0 libzstd1 login logsave lsb-base mawk media-types mount ncurses-base ncurses-bin passwd perl-base python3 python3-biom-format python3-click python3-colorama python3-dateutil python3-decorator python3-future python3-h5py python3-h5py-serial python3-lib2to3 python3-minimal python3-numpy python3-pandas python3-pandas-lib python3-pkg-resources python3-scipy python3-six python3-tz readline-common sed sysvinit-utils tar tzdata util-linux zlib1g 124 upgraded, 89 newly installed, 1 to remove and 0 not upgraded. Need to get 179 MB of archives. After this operation, 661 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 base-files amd64 12.4+deb12u8 [70.9 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libc6 amd64 2.36-9+deb12u9 [2757 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libc-bin amd64 2.36-9+deb12u9 [608 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 gcc-12-base amd64 12.2.0-14 [37.5 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 libgcc-s1 amd64 12.2.0-14 [49.9 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 debianutils amd64 5.7-0.5~deb12u1 [103 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 bash amd64 5.2.15-2+b7 [1490 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 bsdutils amd64 1:2.38.1-5+deb12u2 [94.5 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libgmp10 amd64 2:6.2.1+dfsg1-1.1 [563 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 coreutils amd64 9.1-1 [2897 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 liblzma5 amd64 5.4.1-0.2 [205 kB] Get:12 http://deb.debian.org/debian bookworm/main amd64 libmd0 amd64 1.0.4-2 [29.5 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 libzstd1 amd64 1.5.4+dfsg2-5 [290 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 tar amd64 1.34+dfsg-1.2+deb12u1 [836 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 dpkg amd64 1.21.22 [1567 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 dash amd64 0.5.12-2 [91.8 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 diffutils amd64 1:3.8-4 [352 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 findutils amd64 4.9.0-4 [636 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 grep amd64 3.8-5 [421 kB] Get:20 http://deb.debian.org/debian bookworm/main amd64 gzip amd64 1.12-1 [140 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 hostname amd64 3.23+nmu1 [10.5 kB] Get:22 http://deb.debian.org/debian bookworm/main amd64 login amd64 1:4.13+dfsg1-1+b1 [616 kB] Get:23 http://deb.debian.org/debian bookworm/main amd64 libncursesw6 amd64 6.4-4 [134 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 libtinfo6 amd64 6.4-4 [331 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 ncurses-bin amd64 6.4-4 [421 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 perl-base amd64 5.36.0-7+deb12u1 [1608 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 sed amd64 4.9-1 [329 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 libblkid1 amd64 2.38.1-5+deb12u2 [147 kB] Get:29 http://deb.debian.org/debian bookworm/main amd64 libpcre2-8-0 amd64 10.42-1 [261 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 libselinux1 amd64 3.4-1+b6 [73.7 kB] Get:31 http://deb.debian.org/debian bookworm/main amd64 libmount1 amd64 2.38.1-5+deb12u2 [165 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 libsmartcols1 amd64 2.38.1-5+deb12u2 [107 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 libaudit-common all 1:3.0.9-1 [10.4 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 libcap-ng0 amd64 0.8.3-1+b3 [17.1 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 libaudit1 amd64 1:3.0.9-1 [46.8 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 util-linux-extra amd64 2.38.1-5+deb12u2 [111 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 util-linux amd64 2.38.1-5+deb12u2 [1176 kB] Get:38 http://deb.debian.org/debian bookworm/main amd64 libgpg-error0 amd64 1.46-1 [76.9 kB] Get:39 http://deb.debian.org/debian bookworm/main amd64 libgcrypt20 amd64 1.10.1-3 [696 kB] Get:40 http://deb.debian.org/debian bookworm/main amd64 libstdc++6 amd64 12.2.0-14 [614 kB] Get:41 http://deb.debian.org/debian bookworm/main amd64 libbz2-1.0 amd64 1.0.8-5+b1 [47.3 kB] Get:42 http://deb.debian.org/debian bookworm/main amd64 liblz4-1 amd64 1.9.4-1 [62.9 kB] Get:43 http://deb.debian.org/debian bookworm/main amd64 libcap2 amd64 1:2.66-4 [27.0 kB] Get:44 http://deb.debian.org/debian bookworm/main amd64 libsystemd0 amd64 252.31-1~deb12u1 [332 kB] Get:45 http://deb.debian.org/debian bookworm/main amd64 libudev1 amd64 252.31-1~deb12u1 [109 kB] Get:46 http://deb.debian.org/debian bookworm/main amd64 libxxhash0 amd64 0.8.1-1 [27.6 kB] Get:47 http://deb.debian.org/debian bookworm/main amd64 zlib1g amd64 1:1.2.13.dfsg-1 [86.7 kB] Get:48 http://deb.debian.org/debian bookworm/main amd64 libapt-pkg6.0 amd64 2.6.1 [907 kB] Get:49 http://deb.debian.org/debian bookworm/main amd64 libnettle8 amd64 3.8.1-2 [288 kB] Get:50 http://deb.debian.org/debian bookworm/main amd64 libhogweed6 amd64 3.8.1-2 [328 kB] Get:51 http://deb.debian.org/debian bookworm/main amd64 libunistring2 amd64 1.0-2 [437 kB] Get:52 http://deb.debian.org/debian bookworm/main amd64 libidn2-0 amd64 2.3.3-1+b1 [124 kB] Get:53 http://deb.debian.org/debian bookworm/main amd64 libffi8 amd64 3.4.4-1 [22.9 kB] Get:54 http://deb.debian.org/debian bookworm/main amd64 libp11-kit0 amd64 0.24.1-2 [345 kB] Get:55 http://deb.debian.org/debian bookworm/main amd64 libtasn1-6 amd64 4.19.0-2 [56.6 kB] Get:56 http://deb.debian.org/debian bookworm/main amd64 libgnutls30 amd64 3.7.9-2+deb12u3 [1405 kB] Get:57 http://deb.debian.org/debian bookworm/main amd64 libsemanage-common all 3.4-1 [21.6 kB] Get:58 http://deb.debian.org/debian bookworm/main amd64 libsepol2 amd64 3.4-2.1 [276 kB] Get:59 http://deb.debian.org/debian bookworm/main amd64 libsemanage2 amd64 3.4-1+b5 [89.9 kB] Get:60 http://deb.debian.org/debian bookworm/main amd64 passwd amd64 1:4.13+dfsg1-1+b1 [972 kB] Get:61 http://deb.debian.org/debian bookworm/main amd64 debconf all 1.5.82 [121 kB] Get:62 http://deb.debian.org/debian bookworm/main amd64 libpam0g amd64 1.5.2-6+deb12u1 [92.0 kB] Get:63 http://deb.debian.org/debian bookworm/main amd64 libcrypt1 amd64 1:4.4.33-2 [89.5 kB] Get:64 http://deb.debian.org/debian bookworm/main amd64 libpam-modules-bin amd64 1.5.2-6+deb12u1 [75.6 kB] Get:65 http://deb.debian.org/debian bookworm/main amd64 libpam-modules amd64 1.5.2-6+deb12u1 [291 kB] Get:66 http://deb.debian.org/debian bookworm/main amd64 adduser all 3.134 [183 kB] Get:67 http://deb.debian.org/debian bookworm/main amd64 gpgv amd64 2.2.40-1.1 [648 kB] Get:68 http://deb.debian.org/debian bookworm/main amd64 debian-archive-keyring all 2023.3+deb12u1 [161 kB] Get:69 http://deb.debian.org/debian bookworm/main amd64 libseccomp2 amd64 2.5.4-1+deb12u1 [46.8 kB] Get:70 http://deb.debian.org/debian bookworm/main amd64 apt amd64 2.6.1 [1373 kB] Get:71 http://deb.debian.org/debian bookworm/main amd64 libdebconfclient0 amd64 0.270 [9900 B] Get:72 http://deb.debian.org/debian bookworm/main amd64 base-passwd amd64 3.6.1 [60.0 kB] Get:73 http://deb.debian.org/debian bookworm/main amd64 perl-modules-5.36 all 5.36.0-7+deb12u1 [2815 kB] Get:74 http://deb.debian.org/debian bookworm/main amd64 libgdbm6 amd64 1.23-3 [72.2 kB] Get:75 http://deb.debian.org/debian bookworm/main amd64 libgdbm-compat4 amd64 1.23-3 [48.2 kB] Get:76 http://deb.debian.org/debian bookworm/main amd64 libdb5.3 amd64 5.3.28+dfsg2-1 [697 kB] Get:77 http://deb.debian.org/debian bookworm/main amd64 libperl5.36 amd64 5.36.0-7+deb12u1 [4218 kB] Get:78 http://deb.debian.org/debian bookworm/main amd64 perl amd64 5.36.0-7+deb12u1 [239 kB] Get:79 http://deb.debian.org/debian bookworm/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:80 http://deb.debian.org/debian bookworm/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:81 http://deb.debian.org/debian bookworm/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:82 http://deb.debian.org/debian bookworm/main amd64 usrmerge all 37~deb12u1 [13.3 kB] Get:83 http://deb.debian.org/debian bookworm/main amd64 init-system-helpers all 1.65.2 [49.8 kB] Get:84 http://deb.debian.org/debian bookworm/main amd64 ncurses-base all 6.4-4 [261 kB] Get:85 http://deb.debian.org/debian bookworm/main amd64 sysvinit-utils amd64 3.06-4 [31.0 kB] Get:86 http://deb.debian.org/debian bookworm/main amd64 lsb-base all 11.6 [4584 B] Get:87 http://deb.debian.org/debian bookworm/main amd64 logsave amd64 1.47.0-2 [19.6 kB] Get:88 http://deb.debian.org/debian bookworm/main amd64 libext2fs2 amd64 1.47.0-2 [205 kB] Get:89 http://deb.debian.org/debian bookworm/main amd64 e2fsprogs amd64 1.47.0-2 [571 kB] Get:90 http://deb.debian.org/debian bookworm/main amd64 mount amd64 2.38.1-5+deb12u2 [134 kB] Get:91 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.15-1~deb12u1 [2025 kB] Get:92 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6+deb12u4 [815 kB] Get:93 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1+deb12u1 [98.9 kB] Get:94 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6+deb12u4 [2066 kB] Get:95 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.10.1-2 [15.2 MB] Get:96 http://deb.debian.org/debian bookworm/main amd64 python3-pandas-lib amd64 1.5.3+dfsg-2 [3499 kB] Get:97 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1+deb12u1 [4960 kB] Get:98 http://deb.debian.org/debian bookworm/main amd64 python3-h5py-serial amd64 3.7.0-8 [804 kB] Get:99 http://deb.debian.org/debian bookworm/main amd64 python3-pandas all 1.5.3+dfsg-2 [2885 kB] Get:100 http://deb.debian.org/debian bookworm/main amd64 python3-biom-format amd64 2.1.12-3+b1 [128 kB] Get:101 http://deb.debian.org/debian bookworm/main amd64 cython3 amd64 0.29.32-2+b1 [1302 kB] Get:102 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-3 [76.3 kB] Get:103 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB] Get:104 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB] Get:105 http://deb.debian.org/debian bookworm/main amd64 python3-decorator all 5.1.1-3 [14.9 kB] Get:106 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1 [296 kB] Get:107 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get:108 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:109 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:110 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.40.1-2+deb12u1 [839 kB] Get:111 http://deb.debian.org/debian bookworm/main amd64 libtirpc-common all 1.3.3+ds-1 [14.0 kB] Get:112 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-2+deb12u2 [135 kB] Get:113 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-2+deb12u2 [332 kB] Get:114 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-2+deb12u2 [78.7 kB] Get:115 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-2+deb12u2 [32.6 kB] Get:116 http://deb.debian.org/debian bookworm/main amd64 libcom-err2 amd64 1.47.0-2 [19.8 kB] Get:117 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:118 http://deb.debian.org/debian bookworm/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB] Get:119 http://deb.debian.org/debian bookworm/main amd64 libuuid1 amd64 2.38.1-5+deb12u2 [28.7 kB] Get:120 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6+deb12u4 [1797 kB] Get:121 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6+deb12u4 [573 kB] Get:122 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get:123 http://deb.debian.org/debian bookworm/main amd64 libquadmath0 amd64 12.2.0-14 [144 kB] Get:124 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get:125 http://deb.debian.org/debian bookworm/main amd64 libopenblas0-pthread amd64 0.3.21+ds-4 [6709 kB] Get:126 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get:127 http://deb.debian.org/debian bookworm/main amd64 libisl23 amd64 0.25-1.1 [683 kB] Get:128 http://deb.debian.org/debian bookworm/main amd64 libmpfr6 amd64 4.2.0-1 [701 kB] Get:129 http://deb.debian.org/debian bookworm/main amd64 libmpc3 amd64 1.3.1-1 [51.5 kB] Get:130 http://deb.debian.org/debian bookworm/main amd64 cpp-12 amd64 12.2.0-14 [9764 kB] Get:131 http://deb.debian.org/debian bookworm/main amd64 cpp amd64 4:12.2.0-3 [6836 B] Get:132 http://deb.debian.org/debian bookworm/main amd64 libcc1-0 amd64 12.2.0-14 [41.7 kB] Get:133 http://deb.debian.org/debian bookworm/main amd64 binutils-common amd64 2.40-2 [2487 kB] Get:134 http://deb.debian.org/debian bookworm/main amd64 libbinutils amd64 2.40-2 [572 kB] Get:135 http://deb.debian.org/debian bookworm/main amd64 libctf-nobfd0 amd64 2.40-2 [153 kB] Get:136 http://deb.debian.org/debian bookworm/main amd64 libctf0 amd64 2.40-2 [89.8 kB] Get:137 http://deb.debian.org/debian bookworm/main amd64 libgprofng0 amd64 2.40-2 [812 kB] Get:138 http://deb.debian.org/debian bookworm/main amd64 libjansson4 amd64 2.14-2 [40.8 kB] Get:139 http://deb.debian.org/debian bookworm/main amd64 binutils-x86-64-linux-gnu amd64 2.40-2 [2246 kB] Get:140 http://deb.debian.org/debian bookworm/main amd64 binutils amd64 2.40-2 [65.0 kB] Get:141 http://deb.debian.org/debian bookworm/main amd64 libgomp1 amd64 12.2.0-14 [116 kB] Get:142 http://deb.debian.org/debian bookworm/main amd64 libitm1 amd64 12.2.0-14 [26.1 kB] Get:143 http://deb.debian.org/debian bookworm/main amd64 libatomic1 amd64 12.2.0-14 [9328 B] Get:144 http://deb.debian.org/debian bookworm/main amd64 libasan8 amd64 12.2.0-14 [2195 kB] Get:145 http://deb.debian.org/debian bookworm/main amd64 liblsan0 amd64 12.2.0-14 [969 kB] Get:146 http://deb.debian.org/debian bookworm/main amd64 libtsan2 amd64 12.2.0-14 [2196 kB] Get:147 http://deb.debian.org/debian bookworm/main amd64 libubsan1 amd64 12.2.0-14 [883 kB] Get:148 http://deb.debian.org/debian bookworm/main amd64 libgcc-12-dev amd64 12.2.0-14 [2437 kB] Get:149 http://deb.debian.org/debian bookworm/main amd64 gcc-12 amd64 12.2.0-14 [19.3 MB] Get:150 http://deb.debian.org/debian bookworm/main amd64 gcc amd64 4:12.2.0-3 [5216 B] Get:151 http://deb.debian.org/debian bookworm/main amd64 libc-dev-bin amd64 2.36-9+deb12u9 [46.7 kB] Get:152 http://deb.debian.org/debian bookworm/main amd64 linux-libc-dev amd64 6.1.115-1 [2066 kB] Get:153 http://deb.debian.org/debian bookworm/main amd64 libcrypt-dev amd64 1:4.4.33-2 [118 kB] Get:154 http://deb.debian.org/debian bookworm/main amd64 libtirpc-dev amd64 1.3.3+ds-1 [191 kB] Get:155 http://deb.debian.org/debian bookworm/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:156 http://deb.debian.org/debian bookworm/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Get:157 http://deb.debian.org/debian bookworm/main amd64 libc6-dev amd64 2.36-9+deb12u9 [1904 kB] Get:158 http://deb.debian.org/debian bookworm/main amd64 libstdc++-12-dev amd64 12.2.0-14 [2046 kB] Get:159 http://deb.debian.org/debian bookworm/main amd64 g++-12 amd64 12.2.0-14 [10.7 MB] Get:160 http://deb.debian.org/debian bookworm/main amd64 g++ amd64 4:12.2.0-3 [1356 B] Get:161 http://deb.debian.org/debian bookworm/main amd64 libopenblas0 amd64 0.3.21+ds-4 [32.6 kB] Get:162 http://deb.debian.org/debian bookworm/main amd64 libopenblas-pthread-dev amd64 0.3.21+ds-4 [4971 kB] Get:163 http://deb.debian.org/debian bookworm/main amd64 libopenblas-dev amd64 0.3.21+ds-4 [44.9 kB] Get:164 http://deb.debian.org/debian bookworm/main amd64 libboost1.74-dev amd64 1.74.0+ds1-21 [9508 kB] Get:165 http://deb.debian.org/debian bookworm/main amd64 libboost-dev amd64 1.74.0.3 [4548 B] Get:166 http://deb.debian.org/debian bookworm/main amd64 libpython3.11 amd64 3.11.2-6+deb12u4 [1989 kB] Get:167 http://deb.debian.org/debian bookworm/main amd64 libexpat1-dev amd64 2.5.0-1+deb12u1 [150 kB] Get:168 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get:169 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-dev amd64 3.11.2-6+deb12u4 [4738 kB] Get:170 http://deb.debian.org/debian bookworm/main amd64 libpython3-dev amd64 3.11.2-1+b1 [9572 B] Get:171 http://deb.debian.org/debian bookworm/main amd64 libpython3-all-dev amd64 3.11.2-1+b1 [1068 B] Get:172 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-3 [131 kB] Get:173 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.11.2-1+b1 [1056 B] Get:174 http://deb.debian.org/debian bookworm/main amd64 python3.11-dev amd64 3.11.2-6+deb12u4 [616 kB] Get:175 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:176 http://deb.debian.org/debian bookworm/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get:177 http://deb.debian.org/debian bookworm/main amd64 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get:178 http://deb.debian.org/debian bookworm/main amd64 python3-dev amd64 3.11.2-1+b1 [26.2 kB] Get:179 http://deb.debian.org/debian bookworm/main amd64 python3-all-dev amd64 3.11.2-1+b1 [1072 B] Get:180 http://deb.debian.org/debian bookworm/main amd64 libxsimd-dev amd64 8.1.0-7 [88.8 kB] Get:181 http://deb.debian.org/debian bookworm/main amd64 python3-gast all 0.5.2-2 [9364 B] Get:182 http://deb.debian.org/debian bookworm/main amd64 python3-beniget all 0.4.1-3 [9920 B] Get:183 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB] Get:184 http://deb.debian.org/debian bookworm/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB] Get:185 http://deb.debian.org/debian bookworm/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [28.9 kB] Get:186 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get:187 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get:188 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get:189 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get:190 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1+deb12u2 [73.0 kB] Get:191 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get:192 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:193 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:194 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-10+deb12u8 [390 kB] Get:195 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1+b1 [21.1 kB] Get:196 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1+b1 [7804 B] Get:197 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.8+repack1-1 [1237 kB] Get:198 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.8+repack1-1 [67.8 kB] Get:199 http://deb.debian.org/debian bookworm/main amd64 python3-six all 1.16.0-4 [17.5 kB] Get:200 http://deb.debian.org/debian bookworm/main amd64 tzdata all 2024a-0+deb12u1 [297 kB] Get:201 http://deb.debian.org/debian bookworm/main amd64 python3-dateutil all 2.8.2-2 [78.3 kB] Get:202 http://deb.debian.org/debian bookworm/main amd64 python3-tz all 2022.7.1-4 [30.1 kB] Get:203 http://deb.debian.org/debian bookworm/main amd64 python3-h5py all 3.7.0-8 [10.3 kB] Get:204 http://deb.debian.org/debian bookworm/main amd64 python3-colorama all 0.4.6-2 [36.8 kB] Get:205 http://deb.debian.org/debian bookworm/main amd64 python3-click all 8.1.3-2 [92.2 kB] Get:206 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B] Get:207 http://deb.debian.org/debian bookworm/main amd64 libpam-runtime all 1.5.2-6+deb12u1 [161 kB] Get:208 http://deb.debian.org/debian bookworm/main amd64 libacl1 amd64 2.3.1-3 [31.5 kB] Get:209 http://deb.debian.org/debian bookworm/main amd64 libattr1 amd64 1:2.5.1-4 [22.2 kB] Get:210 http://deb.debian.org/debian bookworm/main amd64 libpcre3 amd64 2:8.39-15 [341 kB] Get:211 http://deb.debian.org/debian bookworm/main amd64 mawk amd64 1.3.4.20200120-3.1 [119 kB] Get:212 http://deb.debian.org/debian bookworm/main amd64 libss2 amd64 1.47.0-2 [24.5 kB] Get:213 http://deb.debian.org/debian bookworm/main amd64 python3-future all 0.18.2-6 [348 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 179 MB in 2s (107 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11290 files and directories currently installed.) Preparing to unpack .../base-files_12.4+deb12u8_amd64.deb ... Unpacking base-files (12.4+deb12u8) over (11.1+deb11u11) ... Setting up base-files (12.4+deb12u8) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11290 files and directories currently installed.) Preparing to unpack .../libc6_2.36-9+deb12u9_amd64.deb ... Unpacking libc6:amd64 (2.36-9+deb12u9) over (2.31-13+deb11u11) ... Setting up libc6:amd64 (2.36-9+deb12u9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11273 files and directories currently installed.) Preparing to unpack .../libc-bin_2.36-9+deb12u9_amd64.deb ... Unpacking libc-bin (2.36-9+deb12u9) over (2.31-13+deb11u11) ... Setting up libc-bin (2.36-9+deb12u9) ... Selecting previously unselected package gcc-12-base:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11273 files and directories currently installed.) Preparing to unpack .../gcc-12-base_12.2.0-14_amd64.deb ... Unpacking gcc-12-base:amd64 (12.2.0-14) ... Setting up gcc-12-base:amd64 (12.2.0-14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11278 files and directories currently installed.) Preparing to unpack .../libgcc-s1_12.2.0-14_amd64.deb ... Unpacking libgcc-s1:amd64 (12.2.0-14) over (10.2.1-6) ... Setting up libgcc-s1:amd64 (12.2.0-14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11278 files and directories currently installed.) Preparing to unpack .../debianutils_5.7-0.5~deb12u1_amd64.deb ... Unpacking debianutils (5.7-0.5~deb12u1) over (4.11.2) ... Setting up debianutils (5.7-0.5~deb12u1) ... update-alternatives: using /usr/bin/which.debianutils to provide /usr/bin/which (which) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11281 files and directories currently installed.) Preparing to unpack .../bash_5.2.15-2+b7_amd64.deb ... Unpacking bash (5.2.15-2+b7) over (5.1-2+deb11u1) ... Setting up bash (5.2.15-2+b7) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11283 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.38.1-5+deb12u2_amd64.deb ... Unpacking bsdutils (1:2.38.1-5+deb12u2) over (1:2.36.1-8+deb11u2) ... Setting up bsdutils (1:2.38.1-5+deb12u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11283 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.2.1+dfsg1-1.1_amd64.deb ... Unpacking libgmp10:amd64 (2:6.2.1+dfsg1-1.1) over (2:6.2.1+dfsg-1+deb11u1) ... Setting up libgmp10:amd64 (2:6.2.1+dfsg1-1.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11283 files and directories currently installed.) Preparing to unpack .../coreutils_9.1-1_amd64.deb ... Unpacking coreutils (9.1-1) over (8.32-4+b1) ... Setting up coreutils (9.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11282 files and directories currently installed.) Preparing to unpack .../liblzma5_5.4.1-0.2_amd64.deb ... Unpacking liblzma5:amd64 (5.4.1-0.2) over (5.2.5-2.1~deb11u1) ... Setting up liblzma5:amd64 (5.4.1-0.2) ... Selecting previously unselected package libmd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11282 files and directories currently installed.) Preparing to unpack .../libmd0_1.0.4-2_amd64.deb ... Unpacking libmd0:amd64 (1.0.4-2) ... Setting up libmd0:amd64 (1.0.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11288 files and directories currently installed.) Preparing to unpack .../libzstd1_1.5.4+dfsg2-5_amd64.deb ... Unpacking libzstd1:amd64 (1.5.4+dfsg2-5) over (1.4.8+dfsg-2.1) ... Setting up libzstd1:amd64 (1.5.4+dfsg2-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11288 files and directories currently installed.) Preparing to unpack .../tar_1.34+dfsg-1.2+deb12u1_amd64.deb ... Unpacking tar (1.34+dfsg-1.2+deb12u1) over (1.34+dfsg-1+deb11u1) ... Setting up tar (1.34+dfsg-1.2+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11288 files and directories currently installed.) Preparing to unpack .../dpkg_1.21.22_amd64.deb ... Unpacking dpkg (1.21.22) over (1.20.13) ... Setting up dpkg (1.21.22) ... Installing new version of config file /etc/cron.daily/dpkg ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11292 files and directories currently installed.) Preparing to unpack .../dash_0.5.12-2_amd64.deb ... Unpacking dash (0.5.12-2) over (0.5.11+git20200708+dd9ef66-5) ... Setting up dash (0.5.12-2) ... (Reading database ... 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Unpacking util-linux (2.38.1-5+deb12u2) over (2.36.1-8+deb11u2) ... dpkg: warning: unable to delete old directory '/usr/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/usr/lib/udev': Directory not empty dpkg: warning: unable to delete old directory '/etc/init.d': Directory not empty Selecting previously unselected package util-linux-extra. Preparing to unpack .../util-linux-extra_2.38.1-5+deb12u2_amd64.deb ... Unpacking util-linux-extra (2.38.1-5+deb12u2) ... Setting up util-linux-extra (2.38.1-5+deb12u2) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11338 files and directories currently installed.) Preparing to unpack .../libsystemd0_252.31-1~deb12u1_amd64.deb ... Unpacking libsystemd0:amd64 (252.31-1~deb12u1) over (247.3-7+deb11u5) ... Setting up libsystemd0:amd64 (252.31-1~deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11339 files and directories currently installed.) Preparing to unpack .../libudev1_252.31-1~deb12u1_amd64.deb ... Unpacking libudev1:amd64 (252.31-1~deb12u1) over (247.3-7+deb11u5) ... Setting up libudev1:amd64 (252.31-1~deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11340 files and directories currently installed.) Preparing to unpack .../libxxhash0_0.8.1-1_amd64.deb ... Unpacking libxxhash0:amd64 (0.8.1-1) over (0.8.0-2) ... Setting up libxxhash0:amd64 (0.8.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11340 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.2.13.dfsg-1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.13.dfsg-1) over (1:1.2.11.dfsg-2+deb11u2) ... Setting up zlib1g:amd64 (1:1.2.13.dfsg-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11340 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.6.1_amd64.deb ... Unpacking libapt-pkg6.0:amd64 (2.6.1) over (2.2.4) ... Setting up libapt-pkg6.0:amd64 (2.6.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11340 files and directories currently installed.) Preparing to unpack .../libnettle8_3.8.1-2_amd64.deb ... Unpacking libnettle8:amd64 (3.8.1-2) over (3.7.3-1) ... Setting up libnettle8:amd64 (3.8.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11340 files and directories currently installed.) Preparing to unpack .../libhogweed6_3.8.1-2_amd64.deb ... Unpacking libhogweed6:amd64 (3.8.1-2) over (3.7.3-1) ... Setting up libhogweed6:amd64 (3.8.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11340 files and directories currently installed.) Preparing to unpack .../libunistring2_1.0-2_amd64.deb ... Unpacking libunistring2:amd64 (1.0-2) over (0.9.10-4) ... Setting up libunistring2:amd64 (1.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11340 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.3-1+b1_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.3-1+b1) over (2.3.0-5) ... Setting up libidn2-0:amd64 (2.3.3-1+b1) ... Selecting previously unselected package libffi8:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11342 files and directories currently installed.) Preparing to unpack .../libffi8_3.4.4-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.4-1) ... Setting up libffi8:amd64 (3.4.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11347 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.24.1-2_amd64.deb ... Unpacking libp11-kit0:amd64 (0.24.1-2) over (0.23.22-1) ... Setting up libp11-kit0:amd64 (0.24.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11347 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.19.0-2_amd64.deb ... Unpacking libtasn1-6:amd64 (4.19.0-2) over (4.16.0-2+deb11u1) ... Setting up libtasn1-6:amd64 (4.19.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11347 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.7.9-2+deb12u3_amd64.deb ... Unpacking libgnutls30:amd64 (3.7.9-2+deb12u3) over (3.7.1-5+deb11u5) ... Setting up libgnutls30:amd64 (3.7.9-2+deb12u3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11349 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.4-1_all.deb ... Unpacking libsemanage-common (3.4-1) over (3.1-1) ... Setting up libsemanage-common (3.4-1) ... Installing new version of config file /etc/selinux/semanage.conf ... Selecting previously unselected package libsepol2:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11349 files and directories currently installed.) Preparing to unpack .../libsepol2_3.4-2.1_amd64.deb ... Unpacking libsepol2:amd64 (3.4-2.1) ... Setting up libsepol2:amd64 (3.4-2.1) ... Selecting previously unselected package libsemanage2:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11353 files and directories currently installed.) Preparing to unpack .../libsemanage2_3.4-1+b5_amd64.deb ... Unpacking libsemanage2:amd64 (3.4-1+b5) ... Setting up libsemanage2:amd64 (3.4-1+b5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11358 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.13+dfsg1-1+b1_amd64.deb ... Unpacking passwd (1:4.13+dfsg1-1+b1) over (1:4.8.1-1) ... Setting up passwd (1:4.13+dfsg1-1+b1) ... Installing new version of config file /etc/default/useradd ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11393 files and directories currently installed.) Removing libsemanage1:amd64 (3.1-1+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11388 files and directories currently installed.) Preparing to unpack .../debconf_1.5.82_all.deb ... Unpacking debconf (1.5.82) over (1.5.77) ... Setting up debconf (1.5.82) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11387 files and directories currently installed.) Preparing to unpack .../libpam0g_1.5.2-6+deb12u1_amd64.deb ... Unpacking libpam0g:amd64 (1.5.2-6+deb12u1) over (1.4.0-9+deb11u1) ... Setting up libpam0g:amd64 (1.5.2-6+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11387 files and directories currently installed.) Preparing to unpack .../libcrypt1_1%3a4.4.33-2_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.4.33-2) over (1:4.4.18-4) ... Setting up libcrypt1:amd64 (1:4.4.33-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11387 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.5.2-6+deb12u1_amd64.deb ... Unpacking libpam-modules-bin (1.5.2-6+deb12u1) over (1.4.0-9+deb11u1) ... Replacing files in old package libpam-modules:amd64 (1.4.0-9+deb11u1) ... Setting up libpam-modules-bin (1.5.2-6+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11394 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.5.2-6+deb12u1_amd64.deb ... Unpacking libpam-modules:amd64 (1.5.2-6+deb12u1) over (1.4.0-9+deb11u1) ... Setting up libpam-modules:amd64 (1.5.2-6+deb12u1) ... Installing new version of config file /etc/security/limits.conf ... Installing new version of config file /etc/security/sepermit.conf ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11395 files and directories currently installed.) Preparing to unpack .../archives/adduser_3.134_all.deb ... moving unchanged adduser.conf to adduser.conf.update-old. New dpkg-conffile will come from the package. Unpacking adduser (3.134) over (3.118+deb11u1) ... Setting up adduser (3.134) ... Installing new version of config file /etc/deluser.conf ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11363 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.40-1.1_amd64.deb ... Unpacking gpgv (2.2.40-1.1) over (2.2.27-2+deb11u2) ... Setting up gpgv (2.2.40-1.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11363 files and directories currently installed.) Preparing to unpack .../debian-archive-keyring_2023.3+deb12u1_all.deb ... Unpacking debian-archive-keyring (2023.3+deb12u1) over (2021.1.1+deb11u1) ... Setting up debian-archive-keyring (2023.3+deb12u1) ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-buster-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-buster-security-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-buster-stable.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bullseye-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bullseye-security-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bullseye-stable.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bookworm-stable.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bookworm-security-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-bookworm-automatic.gpg ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11363 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.5.4-1+deb12u1_amd64.deb ... Unpacking libseccomp2:amd64 (2.5.4-1+deb12u1) over (2.5.1-1+deb11u1) ... Setting up libseccomp2:amd64 (2.5.4-1+deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11363 files and directories currently installed.) Preparing to unpack .../archives/apt_2.6.1_amd64.deb ... Unpacking apt (2.6.1) over (2.2.4) ... Setting up apt (2.6.1) ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... Installing new version of config file /etc/cron.daily/apt-compat ... Removing obsolete conffile /etc/kernel/postinst.d/apt-auto-removal ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11360 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.270_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.270) over (0.260) ... Setting up libdebconfclient0:amd64 (0.270) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11360 files and directories currently installed.) Preparing to unpack .../base-passwd_3.6.1_amd64.deb ... Unpacking base-passwd (3.6.1) over (3.5.51) ... Setting up base-passwd (3.6.1) ... Selecting previously unselected package perl-modules-5.36. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11360 files and directories currently installed.) Preparing to unpack .../perl-modules-5.36_5.36.0-7+deb12u1_all.deb ... Unpacking perl-modules-5.36 (5.36.0-7+deb12u1) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../libgdbm6_1.23-3_amd64.deb ... Unpacking libgdbm6:amd64 (1.23-3) ... Selecting previously unselected package libgdbm-compat4:amd64. Preparing to unpack .../libgdbm-compat4_1.23-3_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.23-3) ... Preparing to unpack .../libdb5.3_5.3.28+dfsg2-1_amd64.deb ... Unpacking libdb5.3:amd64 (5.3.28+dfsg2-1) over (5.3.28+dfsg1-0.8) ... Setting up libdb5.3:amd64 (5.3.28+dfsg2-1) ... Selecting previously unselected package libperl5.36:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12782 files and directories currently installed.) Preparing to unpack .../libperl5.36_5.36.0-7+deb12u1_amd64.deb ... Unpacking libperl5.36:amd64 (5.36.0-7+deb12u1) ... Selecting previously unselected package perl. Preparing to unpack .../perl_5.36.0-7+deb12u1_amd64.deb ... Unpacking perl (5.36.0-7+deb12u1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../libnumber-compare-perl_0.03-3_all.deb ... Unpacking libnumber-compare-perl (0.03-3) ... Setting up libnumber-compare-perl (0.03-3) ... Selecting previously unselected package libtext-glob-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13371 files and directories currently installed.) Preparing to unpack .../libtext-glob-perl_0.11-3_all.deb ... Unpacking libtext-glob-perl (0.11-3) ... Setting up libtext-glob-perl (0.11-3) ... Selecting previously unselected package libfile-find-rule-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13378 files and directories currently installed.) Preparing to unpack .../libfile-find-rule-perl_0.34-3_all.deb ... Unpacking libfile-find-rule-perl (0.34-3) ... Setting up perl-modules-5.36 (5.36.0-7+deb12u1) ... Setting up libgdbm6:amd64 (1.23-3) ... Setting up libgdbm-compat4:amd64 (1.23-3) ... Setting up libperl5.36:amd64 (5.36.0-7+deb12u1) ... Setting up perl (5.36.0-7+deb12u1) ... Setting up libfile-find-rule-perl (0.34-3) ... Selecting previously unselected package usrmerge. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13393 files and directories currently installed.) Preparing to unpack .../usrmerge_37~deb12u1_all.deb ... Unpacking usrmerge (37~deb12u1) ... Setting up usrmerge (37~deb12u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13400 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.65.2_all.deb ... Unpacking init-system-helpers (1.65.2) over (1.60) ... Setting up init-system-helpers (1.65.2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13400 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.4-4_all.deb ... Unpacking ncurses-base (6.4-4) over (6.2+20201114-2+deb11u2) ... Setting up ncurses-base (6.4-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13402 files and directories currently installed.) Preparing to unpack .../archives/lsb-base_11.6_all.deb ... Unpacking lsb-base (11.6) over (11.1.0) ... Preparing to unpack .../sysvinit-utils_3.06-4_amd64.deb ... Unpacking sysvinit-utils (3.06-4) over (2.96-7+deb11u1) ... Setting up sysvinit-utils (3.06-4) ... (Reading database ... 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Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxsimd-dev:amd64 (8.1.0-7) ... Setting up libblas3:amd64 (3.11.0-2) ... Setting up rpcsvc-proto (1.4.3-1) ... Setting up libmpfr6:amd64 (4.2.0-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libquadmath0:amd64 (12.2.0-14) ... Setting up libmpc3:amd64 (1.3.1-1) ... Setting up libatomic1:amd64 (12.2.0-14) ... Setting up libss2:amd64 (1.47.0-2) ... Setting up util-linux (2.38.1-5+deb12u2) ... Setting up libncursesw6:amd64 (6.4-4) ... Setting up libk5crypto3:amd64 (1.20.1-2+deb12u2) ... Setting up logsave (1.47.0-2) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libgfortran5:amd64 (12.2.0-14) ... Setting up libubsan1:amd64 (12.2.0-14) ... Setting up mount (2.38.1-5+deb12u2) ... Setting up libcrypt-dev:amd64 (1:4.4.33-2) ... Setting up libasan8:amd64 (12.2.0-14) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up mawk (1.3.4.20200120-3.1) ... Setting up libkrb5-3:amd64 (1.20.1-2+deb12u2) ... Setting up libtsan2:amd64 (12.2.0-14) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libbinutils:amd64 (2.40-2) ... Setting up libisl23:amd64 (0.25-1.1) ... Setting up libc-dev-bin (2.36-9+deb12u9) ... Setting up readline-common (8.2-1.3) ... Setting up libcc1-0:amd64 (12.2.0-14) ... Setting up liblsan0:amd64 (12.2.0-14) ... Setting up libsz2:amd64 (1.0.6-1+b1) ... Setting up libitm1:amd64 (12.2.0-14) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libctf0:amd64 (2.40-2) ... Setting up liblapack3:amd64 (3.11.0-2) ... Setting up cpp-12 (12.2.0-14) ... Setting up libopenblas0-pthread:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up libreadline8:amd64 (8.2-1.3) ... Setting up e2fsprogs (1.47.0-2) ... Installing new version of config file /etc/mke2fs.conf ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up libgprofng0:amd64 (2.40-2) ... Setting up libgcc-12-dev:amd64 (12.2.0-14) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-2+deb12u2) ... Setting up libjs-sphinxdoc (5.3.0-4) ... Setting up libopenblas0:amd64 (0.3.21+ds-4) ... Setting up cpp (4:12.2.0-3) ... Setting up libcurl4:amd64 (7.88.1-10+deb12u8) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1) ... Setting up binutils-x86-64-linux-gnu (2.40-2) ... Setting up libopenblas-pthread-dev:amd64 (0.3.21+ds-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode Setting up libtirpc3:amd64 (1.3.3+ds-1) ... Setting up libpython3.11-stdlib:amd64 (3.11.2-6+deb12u4) ... Setting up binutils (2.40-2) ... Setting up libopenblas-dev:amd64 (0.3.21+ds-4) ... Setting up libtirpc-dev:amd64 (1.3.3+ds-1) ... Setting up gcc-12 (12.2.0-14) ... Setting up libhdf5-103-1:amd64 (1.10.8+repack1-1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.36-9+deb12u9) ... Setting up libpython3-stdlib:amd64 (3.11.2-1+b1) ... Setting up libhdf5-hl-100:amd64 (1.10.8+repack1-1) ... Setting up python3.11 (3.11.2-6+deb12u4) ... Setting up libpython3.11:amd64 (3.11.2-6+deb12u4) ... Setting up libstdc++-12-dev:amd64 (12.2.0-14) ... Setting up python3 (3.11.2-1+b1) ... Setting up python3-tz (2022.7.1-4) ... Setting up gcc (4:12.2.0-3) ... Setting up python3-six (1.16.0-4) ... Setting up python3-decorator (5.1.1-3) ... Setting up libexpat1-dev:amd64 (2.5.0-1+deb12u1) ... Setting up cython3 (0.29.32-2+b1) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up python3-dateutil (2.8.2-2) ... Setting up python3-lib2to3 (3.11.2-3) ... Setting up g++-12 (12.2.0-14) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-distutils (3.11.2-3) ... Setting up libboost1.74-dev:amd64 (1.74.0+ds1-21) ... Setting up python3-colorama (0.4.6-2) ... Setting up python3-ply (3.11-5) ... Setting up python3-gast (0.5.2-2) ... Setting up python3-all (3.11.2-1+b1) ... Setting up python3-click (8.1.3-2) ... Setting up python3-beniget (0.4.1-3) ... Setting up libpython3.11-dev:amd64 (3.11.2-6+deb12u4) ... Setting up python3-numpy (1:1.24.2-1+deb12u1) ... Setting up g++ (4:12.2.0-3) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up libboost-dev:amd64 (1.74.0.3) ... Setting up python3-future (0.18.2-6) ... Setting up libpython3-dev:amd64 (3.11.2-1+b1) ... Setting up python3.11-dev (3.11.2-6+deb12u4) ... Setting up python3-pandas-lib:amd64 (1.5.3+dfsg-2) ... Setting up python3-h5py-serial (3.7.0-8) ... Setting up python3-pandas (1.5.3+dfsg-2) ... Setting up libpython3-all-dev:amd64 (3.11.2-1+b1) ... Setting up python3-dev (3.11.2-1+b1) ... Setting up python3-h5py (3.7.0-8) ... Setting up python3-all-dev (3.11.2-1+b1) ... Setting up python3-pythran (0.11.0+ds-7) ... Setting up python3-scipy (1.10.1-2) ... Setting up python3-biom-format (2.1.12-3+b1) ... Processing triggers for libc-bin (2.36-9+deb12u9) ... Processing triggers for debianutils (5.7-0.5~deb12u1) ... 0m47.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-yf', 'dist-upgrade'] 0m47.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m48.1s DUMP: 9667be4591f2cce307f0cd9e8fe66190 - 0m48.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m48.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'show', '--no-all-versions', 'python3-biom-format'] 0m48.2s DUMP: Package: python3-biom-format Source: python-biom-format (2.1.12-3) Version: 2.1.12-3+b1 Installed-Size: 738 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: biom-format-tools (<< 2.1.7+dfsg-3) Provides: biom-format-tools Depends: python3-h5py, python3-numpy (>= 1:1.22.0), python3-numpy-abi9, cython3, python3 (<< 3.12), python3 (>= 3.11~), python3-click, python3-pandas, python3-scipy, python3:any, libc6 (>= 2.4) Suggests: python-biom-format-doc Breaks: biom-format-tools (<< 2.1.7+dfsg-3) Description-en: Biological Observation Matrix (BIOM) format (Python 3) The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . This package provides the BIOM format library for the Python 3 interpreter. Description-md5: a8e1165fb97cc05bc8c23295225341cd Homepage: https://biom-format.org/ Section: python Priority: optional Filename: pool/main/p/python-biom-format/python3-biom-format_2.1.12-3+b1_amd64.deb Size: 128444 MD5sum: 787583840e9cb0b94628105ddf601286 SHA256: 82015644e695b13e8388f42e2cdca11469f7a7177b67d46e898e9a8486777df2 0m48.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'show', '--no-all-versions', 'python3-biom-format'] 0m48.2s INFO: apt-cache knows about the following packages: python3-biom-format 0m48.2s INFO: Running scripts pre_install 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_database-server'] 0m48.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_database-server'] 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_exceptions'] 0m48.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_exceptions'] 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_extras'] 0m48.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_extras'] 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture'] 0m48.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture'] 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m48.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy'] 0m48.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release v=12.8,o=Debian,a=stable,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m48.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy'] 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy', 'python3-biom-format'] 0m48.3s DUMP: python3-biom-format: Installed: 2.1.12-3+b1 Candidate: 2.1.12-3+b1 Version table: *** 2.1.12-3+b1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 100 /var/lib/dpkg/status 0m48.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy', 'python3-biom-format'] 0m48.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-y', 'install', 'python3-biom-format'] 0m48.5s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-biom-format is already the newest version (2.1.12-3+b1). The following packages were automatically installed and are no longer required: libmpdec3 libpython3.9-minimal libpython3.9-stdlib python3-future python3.9 python3.9-minimal Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-y', 'install', 'python3-biom-format'] 0m48.5s INFO: Running scripts post_install 0m48.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_install_exceptions'] 0m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_install_exceptions'] 0m48.5s INFO: Running scripts post_distupgrade 0m48.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m48.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_exceptions'] 0m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_exceptions'] 0m48.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m48.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m48.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_zz_backports'] 0m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_zz_backports'] 0m48.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 0m49.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 0m49.7s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpt1yt0tc0 to testing 0m49.7s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m49.7s INFO: Running scripts pre_distupgrade 0m49.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m49.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m49.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m49.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m49.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m49.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m49.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m49.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m49.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m49.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m49.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'update'] 0m51.6s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [172 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9368 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6259 kB] Fetched 15.8 MB in 1s (11.0 MB/s) Reading package lists... 0m51.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'update'] 0m51.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-yf', 'dist-upgrade'] 1m30.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: cython3 libboost-dev libboost1.83-dev libmpdec3 libnsl-dev libopenblas-dev libopenblas-pthread-dev libopenblas0 libperl5.36 libpython3-all-dev libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.9-minimal libpython3.9-stdlib libtirpc-dev libxsimd-dev perl-modules-5.36 python3-all python3-all-dev python3-beniget python3-future python3-gast python3-lib2to3 python3-ply python3-pythran python3-six python3.11 python3.11-dev python3.11-minimal python3.9 python3.9-minimal xtl-dev Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libapt-pkg6.0 libboost1.74-dev libcurl4 libdb5.3 libext2fs2 libgdbm-compat4 libgdbm6 libgnutls30 libhdf5-103-1 libhdf5-hl-100 libhogweed6 libnettle8 libpsl5 libreadline8 libssh2-1 libssl3 libtirpc3 python3-distutils The following NEW packages will be installed: cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-14 gcc-14-base gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu libapt-pkg6.0t64 libboost1.83-dev libbsd0 libcurl4t64 libdb5.3t64 libext2fs2t64 libgcc-14-dev libgdbm-compat4t64 libgdbm6t64 libgnutls30t64 libhdf5-103-1t64 libhdf5-hl-100t64 libhogweed6t64 libhwasan0 libnettle8t64 libperl5.40 libpsl5t64 libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libreadline8t64 libsframe1 libssh2-1t64 libssl3t64 libstdc++-14-dev libtirpc3t64 libunistring5 login.defs netbase openssl-provider-legacy perl-modules-5.40 python3-autocommand python3-inflect python3-jaraco.context python3-jaraco.functools python3-more-itertools python3-setuptools python3-typeguard python3-typing-extensions python3-zipp python3.12 python3.12-dev python3.12-minimal xtl-dev The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils coreutils cpp cpp-12 cython3 dash debconf debian-archive-keyring debianutils diffutils dpkg e2fsprogs findutils g++ g++-12 gcc gcc-12 gcc-12-base gpgv grep gzip hostname init-system-helpers libacl1 libaec0 libasan8 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblas3 libblkid1 libboost-dev libbrotli1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libctf-nobfd0 libctf0 libdebconfclient0 libexpat1 libexpat1-dev libffi8 libgcc-12-dev libgcc-s1 libgcrypt20 libgfortran5 libgmp10 libgomp1 libgpg-error0 libgprofng0 libgssapi-krb5-2 libidn2-0 libisl23 libitm1 libjansson4 libjs-sphinxdoc libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 libldap-2.5-0 liblsan0 liblz4-1 liblzf1 liblzma5 libmd0 libmount1 libmpc3 libmpfr6 libncursesw6 libnghttp2-14 libnsl-dev libnsl2 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libpython3-all-dev libpython3-dev libpython3-stdlib libquadmath0 librtmp1 libsasl2-2 libsasl2-modules-db libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsmartcols1 libsqlite3-0 libss2 libstdc++-12-dev libstdc++6 libsystemd0 libsz2 libtasn1-6 libtinfo6 libtirpc-common libtirpc-dev libtsan2 libubsan1 libudev1 libuuid1 libxsimd-dev libxxhash0 libzstd1 linux-libc-dev login logsave mawk media-types mount ncurses-base ncurses-bin passwd perl perl-base python3 python3-all python3-all-dev python3-biom-format python3-click python3-colorama python3-dateutil python3-decorator python3-dev python3-gast python3-h5py python3-h5py-serial python3-lib2to3 python3-minimal python3-numpy python3-pandas python3-pandas-lib python3-pkg-resources python3-ply python3-pythran python3-scipy python3-six python3-tz readline-common sed sysvinit-utils tar tzdata usrmerge util-linux util-linux-extra zlib1g zlib1g-dev 177 upgraded, 55 newly installed, 18 to remove and 0 not upgraded. Need to get 244 MB of archives. After this operation, 421 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 base-files amd64 13.5 [72.8 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libnsl-dev amd64 1.3.0-3+b3 [67.5 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libcrypt-dev amd64 1:4.4.36-5 [118 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libc6-dev amd64 2.40-3 [1956 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libc-dev-bin amd64 2.40-3 [51.8 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3+b1 [190 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 libzstd1 amd64 1.5.6+dfsg-1+b1 [300 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.2-1+b1 [429 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:22 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 libc6 amd64 2.40-3 [2807 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 libc-bin amd64 2.40-3 [627 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 libgmp10 amd64 2:6.3.0+dfsg-2+b2 [560 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 libgpg-error0 amd64 1.50-4 [81.6 kB] Get:28 http://deb.debian.org/debian trixie/main amd64 libgcrypt20 amd64 1.11.0-6 [843 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 gcc-14-base amd64 14.2.0-8 [47.2 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 libgcc-s1 amd64 14.2.0-8 [72.7 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libstdc++6 amd64 14.2.0-8 [714 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 libnettle8t64 amd64 3.10-1+b1 [305 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libhogweed6t64 amd64 3.10-1+b1 [335 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 libp11-kit0 amd64 0.25.5-2+b1 [429 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 libgnutls30t64 amd64 3.8.6-2+b1 [1446 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 libapt-pkg6.0t64 amd64 2.9.10 [1045 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Get:38 http://deb.debian.org/debian trixie/main amd64 libxxhash0 amd64 0.8.2-2+b2 [26.6 kB] Get:39 http://deb.debian.org/debian trixie/main amd64 liblz4-1 amd64 1.9.4-3+b1 [60.3 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 liblzma5 amd64 5.6.3-1+b1 [272 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 libcap2 amd64 1:2.66-5+b1 [27.8 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 libsystemd0 amd64 256.7-3 [382 kB] Get:43 http://deb.debian.org/debian trixie/main amd64 libudev1 amd64 256.7-3 [145 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 libdebconfclient0 amd64 0.273 [10.1 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 libpcre2-8-0 amd64 10.42-4+b2 [266 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 libselinux1 amd64 3.7-3+b1 [77.0 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 base-passwd amd64 3.6.5 [53.1 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 login.defs all 1:4.16.0-4 [185 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Get:50 http://deb.debian.org/debian trixie/main amd64 libbsd0 amd64 0.12.2-2 [131 kB] Get:51 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:52 http://deb.debian.org/debian trixie/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-9 [704 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 libaudit-common all 1:4.0.1-3 [12.4 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libcap-ng0 amd64 0.8.5-3+b1 [17.5 kB] Get:55 http://deb.debian.org/debian trixie/main amd64 libaudit1 amd64 1:4.0.1-3 [54.6 kB] Get:56 http://deb.debian.org/debian trixie/main amd64 libcrypt1 amd64 1:4.4.36-5 [89.8 kB] Get:57 http://deb.debian.org/debian trixie/main amd64 perl-modules-5.40 all 5.40.0-7 [3017 kB] Get:58 http://deb.debian.org/debian trixie/main amd64 libgdbm6t64 amd64 1.24-2 [75.2 kB] Get:59 http://deb.debian.org/debian trixie/main amd64 libgdbm-compat4t64 amd64 1.24-2 [50.3 kB] Get:60 http://deb.debian.org/debian trixie/main amd64 libperl5.40 amd64 5.40.0-7 [4324 kB] Get:61 http://deb.debian.org/debian trixie/main amd64 perl amd64 5.40.0-7 [267 kB] Get:62 http://deb.debian.org/debian trixie/main amd64 perl-base amd64 5.40.0-7 [1675 kB] Get:63 http://deb.debian.org/debian trixie/main amd64 debconf all 1.5.87 [119 kB] Get:64 http://deb.debian.org/debian trixie/main amd64 libpam0g amd64 1.5.3-7+b1 [68.3 kB] Get:65 http://deb.debian.org/debian trixie/main amd64 libpam-modules-bin amd64 1.5.3-7+b1 [54.1 kB] Get:66 http://deb.debian.org/debian trixie/main amd64 libpam-modules amd64 1.5.3-7+b1 [267 kB] Get:67 http://deb.debian.org/debian trixie/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Get:68 http://deb.debian.org/debian trixie/main amd64 libattr1 amd64 1:2.5.2-2 [22.7 kB] Get:69 http://deb.debian.org/debian trixie/main amd64 libsemanage-common all 3.7-2 [7108 B] Get:70 http://deb.debian.org/debian trixie/main amd64 libsepol2 amd64 3.7-1 [293 kB] Get:71 http://deb.debian.org/debian trixie/main amd64 libsemanage2 amd64 3.7-2+b1 [91.2 kB] Get:72 http://deb.debian.org/debian trixie/main amd64 passwd amd64 1:4.16.0-4 [1232 kB] Get:73 http://deb.debian.org/debian trixie/main amd64 adduser all 3.137 [140 kB] Get:74 http://deb.debian.org/debian trixie/main amd64 gpgv amd64 2.2.45-2 [219 kB] Get:75 http://deb.debian.org/debian trixie/main amd64 debian-archive-keyring all 2023.4 [161 kB] Get:76 http://deb.debian.org/debian trixie/main amd64 libseccomp2 amd64 2.5.5-1+b3 [47.4 kB] Get:77 http://deb.debian.org/debian trixie/main amd64 apt amd64 2.9.10 [1413 kB] Get:78 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.6-1 [23.6 kB] Get:79 http://deb.debian.org/debian trixie/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB] Get:80 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:81 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get:82 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get:83 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get:84 http://deb.debian.org/debian trixie/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get:85 http://deb.debian.org/debian trixie/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get:86 http://deb.debian.org/debian trixie/main amd64 openssl-provider-legacy amd64 3.3.2-2 [298 kB] Get:87 http://deb.debian.org/debian trixie/main amd64 libssl3t64 amd64 3.3.2-2 [2271 kB] Get:88 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get:89 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:90 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get:91 http://deb.debian.org/debian trixie/main amd64 linux-libc-dev all 6.11.7-1 [2454 kB] Get:92 http://deb.debian.org/debian trixie/main amd64 debianutils amd64 5.20 [89.5 kB] Get:93 http://deb.debian.org/debian trixie/main amd64 bash amd64 5.2.32-1+b2 [1500 kB] Get:94 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.2-11 [105 kB] Get:95 http://deb.debian.org/debian trixie/main amd64 usrmerge all 39 [13.1 kB] Get:96 http://deb.debian.org/debian trixie/main amd64 coreutils amd64 9.5-1+b1 [2922 kB] Get:97 http://deb.debian.org/debian trixie/main amd64 dash amd64 0.5.12-9 [93.2 kB] Get:98 http://deb.debian.org/debian trixie/main amd64 diffutils amd64 1:3.10-1 [375 kB] Get:99 http://deb.debian.org/debian trixie/main amd64 tar amd64 1.35+dfsg-3 [813 kB] Get:100 http://deb.debian.org/debian trixie/main amd64 dpkg amd64 1.22.11 [1531 kB] Get:101 http://deb.debian.org/debian trixie/main amd64 findutils amd64 4.10.0-3 [700 kB] Get:102 http://deb.debian.org/debian trixie/main amd64 grep amd64 3.11-4 [431 kB] Get:103 http://deb.debian.org/debian trixie/main amd64 gzip amd64 1.12-1.1 [133 kB] Get:104 http://deb.debian.org/debian trixie/main amd64 hostname amd64 3.25 [11.0 kB] Get:105 http://deb.debian.org/debian trixie/main amd64 libpam-runtime all 1.5.3-7 [140 kB] Get:106 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.2-11 [81.5 kB] Get:107 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5-2+b1 [136 kB] Get:108 http://deb.debian.org/debian trixie/main amd64 libtinfo6 amd64 6.5-2+b1 [344 kB] Get:109 http://deb.debian.org/debian trixie/main amd64 ncurses-bin amd64 6.5-2+b1 [434 kB] Get:110 http://deb.debian.org/debian trixie/main amd64 sed amd64 4.9-2 [329 kB] Get:111 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.2-11 [168 kB] Get:112 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.2-11 [199 kB] Get:113 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.2-11 [139 kB] Get:114 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.2-11 [35.9 kB] Get:115 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.2-11 [1213 kB] Get:116 http://deb.debian.org/debian trixie/main amd64 util-linux-extra amd64 2.40.2-11 [265 kB] Get:117 http://deb.debian.org/debian trixie/main amd64 init-system-helpers all 1.67 [38.7 kB] Get:118 http://deb.debian.org/debian trixie/main amd64 ncurses-base all 6.5-2 [270 kB] Get:119 http://deb.debian.org/debian trixie/main amd64 sysvinit-utils amd64 3.11-1 [33.1 kB] Get:120 http://deb.debian.org/debian trixie/main amd64 libgomp1 amd64 14.2.0-8 [137 kB] Get:121 http://deb.debian.org/debian trixie/main amd64 libitm1 amd64 14.2.0-8 [25.9 kB] Get:122 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14.2.0-8 [9280 B] Get:123 http://deb.debian.org/debian trixie/main amd64 libasan8 amd64 14.2.0-8 [2729 kB] Get:124 http://deb.debian.org/debian trixie/main amd64 liblsan0 amd64 14.2.0-8 [1205 kB] Get:125 http://deb.debian.org/debian trixie/main amd64 libisl23 amd64 0.27-1 [659 kB] Get:126 http://deb.debian.org/debian trixie/main amd64 libmpfr6 amd64 4.2.1-1+b2 [724 kB] Get:127 http://deb.debian.org/debian trixie/main amd64 libmpc3 amd64 1.3.1-1+b3 [52.2 kB] Get:128 http://deb.debian.org/debian trixie/main amd64 g++-12 amd64 12.4.0-2 [10.8 MB] Get:129 http://deb.debian.org/debian trixie/main amd64 gcc-12 amd64 12.4.0-2 [19.6 MB] Get:130 http://deb.debian.org/debian trixie/main amd64 cpp-12 amd64 12.4.0-2 [9862 kB] Get:131 http://deb.debian.org/debian trixie/main amd64 libubsan1 amd64 14.2.0-8 [1075 kB] Get:132 http://deb.debian.org/debian trixie/main amd64 libstdc++-12-dev amd64 12.4.0-2 [2081 kB] Get:133 http://deb.debian.org/debian trixie/main amd64 libquadmath0 amd64 14.2.0-8 [145 kB] Get:134 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get:135 http://deb.debian.org/debian trixie/main amd64 libcc1-0 amd64 14.2.0-8 [42.8 kB] Get:136 http://deb.debian.org/debian trixie/main amd64 libgcc-12-dev amd64 12.4.0-2 [2431 kB] Get:137 http://deb.debian.org/debian trixie/main amd64 libtsan2 amd64 14.2.0-8 [2461 kB] Get:138 http://deb.debian.org/debian trixie/main amd64 gcc-12-base amd64 12.4.0-2 [42.9 kB] Get:139 http://deb.debian.org/debian trixie/main amd64 libgprofng0 amd64 2.43.1-5 [797 kB] Get:140 http://deb.debian.org/debian trixie/main amd64 libctf0 amd64 2.43.1-5 [88.4 kB] Get:141 http://deb.debian.org/debian trixie/main amd64 libctf-nobfd0 amd64 2.43.1-5 [154 kB] Get:142 http://deb.debian.org/debian trixie/main amd64 binutils-x86-64-linux-gnu amd64 2.43.1-5 [2257 kB] Get:143 http://deb.debian.org/debian trixie/main amd64 libbinutils amd64 2.43.1-5 [529 kB] Get:144 http://deb.debian.org/debian trixie/main amd64 binutils amd64 2.43.1-5 [67.8 kB] Get:145 http://deb.debian.org/debian trixie/main amd64 binutils-common amd64 2.43.1-5 [2631 kB] Get:146 http://deb.debian.org/debian trixie/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Get:147 http://deb.debian.org/debian trixie/main amd64 libsframe1 amd64 2.43.1-5 [77.1 kB] Get:148 http://deb.debian.org/debian trixie/main amd64 libhwasan0 amd64 14.2.0-8 [1489 kB] Get:149 http://deb.debian.org/debian trixie/main amd64 libgcc-14-dev amd64 14.2.0-8 [2674 kB] Get:150 http://deb.debian.org/debian trixie/main amd64 libstdc++-14-dev amd64 14.2.0-8 [2369 kB] Get:151 http://deb.debian.org/debian trixie/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get:152 http://deb.debian.org/debian trixie/main amd64 libboost1.83-dev amd64 1.83.0-3.2 [10.6 MB] Get:153 http://deb.debian.org/debian trixie/main amd64 logsave amd64 1.47.1-1+b1 [23.0 kB] Get:154 http://deb.debian.org/debian trixie/main amd64 libext2fs2t64 amd64 1.47.1-1+b1 [211 kB] Get:155 http://deb.debian.org/debian trixie/main amd64 e2fsprogs amd64 1.47.1-1+b1 [585 kB] Get:156 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-5 [69.3 kB] Get:157 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get:158 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get:159 http://deb.debian.org/debian trixie/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get:160 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get:161 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get:162 http://deb.debian.org/debian trixie/main amd64 python3-all-dev amd64 3.12.6-1 [1068 B] Get:163 http://deb.debian.org/debian trixie/main amd64 python3-all amd64 3.12.6-1 [1040 B] Get:164 http://deb.debian.org/debian trixie/main amd64 libpython3-all-dev amd64 3.12.6-1 [1064 B] Get:165 http://deb.debian.org/debian trixie/main amd64 libpython3-dev amd64 3.12.6-1 [9952 B] Get:166 http://deb.debian.org/debian trixie/main amd64 python3-dev amd64 3.12.6-1 [26.1 kB] Get:167 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.13.1-5 [16.7 MB] Get:168 http://deb.debian.org/debian trixie/main amd64 python3-pandas-lib amd64 2.2.3+dfsg-5+b1 [7307 kB] Get:169 http://deb.debian.org/debian trixie/main amd64 python3-biom-format amd64 2.1.16-1+b2 [176 kB] Get:170 http://deb.debian.org/debian trixie/main amd64 python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get:171 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB] Get:172 http://deb.debian.org/debian trixie/main amd64 python3-h5py-serial amd64 3.11.0-5 [975 kB] Get:173 http://deb.debian.org/debian trixie/main amd64 cython3 amd64 3.0.11+dfsg-1+b1 [3157 kB] Get:174 http://deb.debian.org/debian trixie/main amd64 python3-lib2to3 all 3.12.7-1 [77.0 kB] Get:175 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get:176 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get:177 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get:178 http://deb.debian.org/debian trixie/main amd64 libopenblas-pthread-dev amd64 0.3.28+ds-3 [4889 kB] Get:179 http://deb.debian.org/debian trixie/main amd64 libopenblas0-pthread amd64 0.3.28+ds-3 [6991 kB] Get:180 http://deb.debian.org/debian trixie/main amd64 libopenblas0 amd64 0.3.28+ds-3 [41.0 kB] Get:181 http://deb.debian.org/debian trixie/main amd64 libopenblas-dev amd64 0.3.28+ds-3 [54.4 kB] Get:182 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.0-3+b1 [152 kB] Get:183 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-3+b1 [2450 kB] Get:184 http://deb.debian.org/debian 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libpython3.12-dev amd64 3.12.7-3 [5124 kB] Get:206 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get:207 http://deb.debian.org/debian trixie/main amd64 python3.12-dev amd64 3.12.7-3 [505 kB] Get:208 http://deb.debian.org/debian trixie/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get:209 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get:210 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.2-11 [155 kB] Get:211 http://deb.debian.org/debian trixie/main amd64 mawk amd64 1.3.4.20240905-1 [138 kB] Get:212 http://deb.debian.org/debian trixie/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8 [11.1 MB] Get:213 http://deb.debian.org/debian trixie/main amd64 g++ amd64 4:14.2.0-1 [1344 B] Get:214 http://deb.debian.org/debian trixie/main amd64 gcc amd64 4:14.2.0-1 [5136 B] Get:215 http://deb.debian.org/debian trixie/main amd64 cpp amd64 4:14.2.0-1 [1568 B] Get:216 http://deb.debian.org/debian trixie/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1 [4840 B] Get:217 http://deb.debian.org/debian trixie/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8 [21.4 MB] Get:218 http://deb.debian.org/debian trixie/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8 [12.1 MB] Get:219 http://deb.debian.org/debian trixie/main amd64 cpp-14 amd64 14.2.0-8 [1276 B] Get:220 http://deb.debian.org/debian trixie/main amd64 gcc-14 amd64 14.2.0-8 [530 kB] Get:221 http://deb.debian.org/debian trixie/main amd64 g++-14 amd64 14.2.0-8 [20.2 kB] Get:222 http://deb.debian.org/debian trixie/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1 [1436 B] Get:223 http://deb.debian.org/debian trixie/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:224 http://deb.debian.org/debian trixie/main amd64 libss2 amd64 1.47.1-1+b1 [27.9 kB] Get:225 http://deb.debian.org/debian trixie/main amd64 xtl-dev all 0.7.7-1 [90.3 kB] Get:226 http://deb.debian.org/debian trixie/main amd64 libxsimd-dev amd64 13.0.0-1 [129 kB] Get:227 http://deb.debian.org/debian trixie/main amd64 python3-gast all 0.6.0-1 [18.7 kB] Get:228 http://deb.debian.org/debian trixie/main amd64 python3-ply all 3.11-7 [62.6 kB] Get:229 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get:230 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 74.1.2-2 [736 kB] Get:231 http://deb.debian.org/debian trixie/main amd64 python3-pythran amd64 0.16.1+ds-3 [447 kB] Get:232 http://deb.debian.org/debian trixie/main amd64 python3-six all 1.16.0-7 [16.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 244 MB in 3s (91.6 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36278 files and directories currently installed.) Preparing to unpack .../base-files_13.5_amd64.deb ... Unpacking base-files (13.5) over (12.4+deb12u8) ... Setting up base-files (13.5) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Updating /etc/profile to current default. (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36297 files and directories currently installed.) Removing libtirpc3:amd64 (1.3.3+ds-1) ... Selecting previously unselected package libtirpc3t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36290 files and directories currently installed.) Preparing to unpack .../0-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Preparing to unpack .../1-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... Preparing to unpack .../2-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... Preparing to unpack .../3-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... Preparing to unpack .../4-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... Preparing to unpack .../5-libzstd1_1.5.6+dfsg-1+b1_amd64.deb ... Unpacking libzstd1:amd64 (1.5.6+dfsg-1+b1) over (1.5.4+dfsg2-5) ... Setting up libzstd1:amd64 (1.5.6+dfsg-1+b1) ... Selecting previously unselected package libunistring5:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36305 files and directories currently installed.) Preparing to unpack .../libunistring5_1.2-1+b1_amd64.deb ... Unpacking libunistring5:amd64 (1.2-1+b1) ... Setting up libunistring5:amd64 (1.2-1+b1) ... dpkg: libhdf5-103-1:amd64: dependency problems, but removing anyway as you requested: python3-h5py-serial depends on libhdf5-103-1. libhdf5-hl-100:amd64 depends on libhdf5-103-1. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36312 files and directories currently installed.) Removing libhdf5-103-1:amd64 (1.10.8+repack1-1) ... Selecting previously unselected package libhdf5-103-1t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36304 files and directories currently installed.) Preparing to unpack .../libhdf5-103-1t64_1.10.10+repack-4_amd64.deb ... Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-4) ... dpkg: libhdf5-hl-100:amd64: dependency problems, but removing anyway as you requested: python3-h5py-serial depends on libhdf5-hl-100. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36313 files and directories currently installed.) Removing libhdf5-hl-100:amd64 (1.10.8+repack1-1) ... Selecting previously unselected package libhdf5-hl-100t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36306 files and directories currently installed.) Preparing to unpack .../libhdf5-hl-100t64_1.10.10+repack-4_amd64.deb ... Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36314 files and directories currently installed.) Removing libcurl4:amd64 (7.88.1-10+deb12u8) ... Removing libpsl5:amd64 (0.21.2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36302 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.7-2+b1_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.7-2+b1) over (2.3.3-1+b1) ... Setting up libidn2-0:amd64 (2.3.7-2+b1) ... Selecting previously unselected package libpsl5t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36303 files and directories currently installed.) Preparing to unpack .../libpsl5t64_0.21.2-1.1+b1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1+b1) ... Preparing to unpack .../zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) over (1:1.2.13.dfsg-1) ... Preparing to unpack .../zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1+b1) over (1:1.2.13.dfsg-1) ... Setting up zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36313 files and directories currently installed.) Removing libssh2-1:amd64 (1.10.0-3+b1) ... Selecting previously unselected package libssh2-1t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36304 files and directories currently installed.) Preparing to unpack .../libssh2-1t64_1.11.1-1_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.1-1) ... Preparing to unpack .../libbrotli1_1.1.0-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b6) over (1.0.9-2+b6) ... Preparing to unpack .../libc6_2.40-3_amd64.deb ... Unpacking libc6:amd64 (2.40-3) over (2.36-9+deb12u9) ... Setting up libc6:amd64 (2.40-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36315 files and directories currently installed.) Preparing to unpack .../libc-bin_2.40-3_amd64.deb ... Unpacking libc-bin (2.40-3) over (2.36-9+deb12u9) ... Setting up libc-bin (2.40-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36315 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.3.0+dfsg-2+b2_amd64.deb ... Unpacking libgmp10:amd64 (2:6.3.0+dfsg-2+b2) over (2:6.2.1+dfsg1-1.1) ... Setting up libgmp10:amd64 (2:6.3.0+dfsg-2+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36316 files and directories currently installed.) Preparing to unpack .../librtmp1_2.4+20151223.gitfa8646d.1-2+b5_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) over (2.4+20151223.gitfa8646d.1-2+b2) ... Preparing to unpack .../libgpg-error0_1.50-4_amd64.deb ... Unpacking libgpg-error0:amd64 (1.50-4) over (1.46-1) ... Setting up libgpg-error0:amd64 (1.50-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36316 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.11.0-6_amd64.deb ... Unpacking libgcrypt20:amd64 (1.11.0-6) over (1.10.1-3) ... Setting up libgcrypt20:amd64 (1.11.0-6) ... Selecting previously unselected package gcc-14-base:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36316 files and directories currently installed.) Preparing to unpack .../gcc-14-base_14.2.0-8_amd64.deb ... Unpacking gcc-14-base:amd64 (14.2.0-8) ... Setting up gcc-14-base:amd64 (14.2.0-8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36321 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14.2.0-8_amd64.deb ... Unpacking libgcc-s1:amd64 (14.2.0-8) over (12.2.0-14) ... Setting up libgcc-s1:amd64 (14.2.0-8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36321 files and directories currently installed.) Preparing to unpack .../libstdc++6_14.2.0-8_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-8) over (12.2.0-14) ... Setting up libstdc++6:amd64 (14.2.0-8) ... dpkg: libnettle8:amd64: dependency problems, but removing anyway as you requested: libhogweed6:amd64 depends on libnettle8. libgnutls30:amd64 depends on libnettle8 (>= 3.7~). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36321 files and directories currently installed.) Removing libnettle8:amd64 (3.8.1-2) ... Selecting previously unselected package libnettle8t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36313 files and directories currently installed.) Preparing to unpack .../libnettle8t64_3.10-1+b1_amd64.deb ... Unpacking libnettle8t64:amd64 (3.10-1+b1) ... Setting up libnettle8t64:amd64 (3.10-1+b1) ... dpkg: libhogweed6:amd64: dependency problems, but removing anyway as you requested: libgnutls30:amd64 depends on libhogweed6 (>= 3.6). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36323 files and directories currently installed.) Removing libhogweed6:amd64 (3.8.1-2) ... Selecting previously unselected package libhogweed6t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36317 files and directories currently installed.) Preparing to unpack .../libhogweed6t64_3.10-1+b1_amd64.deb ... Unpacking libhogweed6t64:amd64 (3.10-1+b1) ... Setting up libhogweed6t64:amd64 (3.10-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36325 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.25.5-2+b1_amd64.deb ... Unpacking libp11-kit0:amd64 (0.25.5-2+b1) over (0.24.1-2) ... Setting up libp11-kit0:amd64 (0.25.5-2+b1) ... dpkg: libgnutls30:amd64: dependency problems, but removing anyway as you requested: libldap-2.5-0:amd64 depends on libgnutls30 (>= 3.7.5). apt depends on libgnutls30 (>= 3.7.5). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36326 files and directories currently installed.) Removing libgnutls30:amd64 (3.7.9-2+deb12u3) ... Selecting previously unselected package libgnutls30t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36297 files and directories currently installed.) Preparing to unpack .../libgnutls30t64_3.8.6-2+b1_amd64.deb ... Unpacking libgnutls30t64:amd64 (3.8.6-2+b1) ... Setting up libgnutls30t64:amd64 (3.8.6-2+b1) ... dpkg: libapt-pkg6.0:amd64: dependency problems, but removing anyway as you requested: apt depends on libapt-pkg6.0 (>= 2.6.1). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36327 files and directories currently installed.) Removing libapt-pkg6.0:amd64 (2.6.1) ... Selecting previously unselected package libapt-pkg6.0t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36278 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.10_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.10) ... Setting up libapt-pkg6.0t64:amd64 (2.9.10) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36328 files and directories currently installed.) Preparing to unpack .../libbz2-1.0_1.0.8-6_amd64.deb ... Unpacking libbz2-1.0:amd64 (1.0.8-6) over (1.0.8-5+b1) ... Setting up libbz2-1.0:amd64 (1.0.8-6) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36329 files and directories currently installed.) Preparing to unpack .../liblzma5_5.6.3-1+b1_amd64.deb ... Unpacking liblzma5:amd64 (5.6.3-1+b1) over (5.4.1-0.2) ... Setting up liblzma5:amd64 (5.6.3-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36330 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.66-5+b1_amd64.deb ... Unpacking libcap2:amd64 (1:2.66-5+b1) over (1:2.66-4) ... Setting up libcap2:amd64 (1:2.66-5+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36331 files and directories currently installed.) Preparing to unpack .../libsystemd0_256.7-3_amd64.deb ... Unpacking libsystemd0:amd64 (256.7-3) over (252.31-1~deb12u1) ... Setting up libsystemd0:amd64 (256.7-3) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36331 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.273_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.273) over (0.270) ... Setting up libdebconfclient0:amd64 (0.273) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36332 files and directories currently installed.) Preparing to unpack .../libselinux1_3.7-3+b1_amd64.deb ... Unpacking libselinux1:amd64 (3.7-3+b1) over (3.4-1+b6) ... Setting up libselinux1:amd64 (3.7-3+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36333 files and directories currently installed.) Preparing to unpack .../base-passwd_3.6.5_amd64.deb ... Unpacking base-passwd (3.6.5) over (3.6.1) ... Setting up base-passwd (3.6.5) ... Selecting previously unselected package login.defs. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36336 files and directories currently installed.) Preparing to unpack .../login.defs_1%3a4.16.0-4_all.deb ... Unpacking login.defs (1:4.16.0-4) ... Replacing files in old package login (1:4.13+dfsg1-1+b1) ... Setting up login.defs (1:4.16.0-4) ... Installing new version of config file /etc/login.defs ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36342 files and directories currently installed.) Preparing to unpack .../libbsd0_0.12.2-2_amd64.deb ... Unpacking libbsd0:amd64 (0.12.2-2) ... Setting up libbsd0:amd64 (0.12.2-2) ... (Reading database ... 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Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) over (2.1.28+dfsg-10) ... dpkg: libdb5.3:amd64: dependency problems, but removing anyway as you requested: libpython3.9-stdlib:amd64 depends on libdb5.3. libpython3.11-stdlib:amd64 depends on libdb5.3. libperl5.36:amd64 depends on libdb5.3. libpam-modules:amd64 depends on libdb5.3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36348 files and directories currently installed.) Removing libdb5.3:amd64 (5.3.28+dfsg2-1) ... Selecting previously unselected package libdb5.3t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36342 files and directories currently installed.) Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-9_amd64.deb ... Unpacking libdb5.3t64:amd64 (5.3.28+dfsg2-9) ... Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-9) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36348 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.8.5-3+b1_amd64.deb ... Unpacking libcap-ng0:amd64 (0.8.5-3+b1) over (0.8.3-1+b3) ... Setting up libcap-ng0:amd64 (0.8.5-3+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36348 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a4.0.1-3_amd64.deb ... Unpacking libaudit1:amd64 (1:4.0.1-3) over (1:3.0.9-1) ... Setting up libaudit1:amd64 (1:4.0.1-3) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 36348 files and directories currently installed.) Preparing to unpack .../perl_5.40.0-7_amd64.deb ... Unpacking perl (5.40.0-7) over (5.36.0-7+deb12u1) ... Selecting previously unselected package perl-modules-5.40. Preparing to unpack .../perl-modules-5.40_5.40.0-7_all.deb ... Unpacking perl-modules-5.40 (5.40.0-7) ... dpkg: libgdbm6:amd64: dependency problems, but removing anyway as you requested: libperl5.36:amd64 depends on libgdbm6 (>= 1.21). libgdbm-compat4:amd64 depends on libgdbm6 (>= 1.16). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 37911 files and directories currently installed.) Removing libgdbm6:amd64 (1.23-3) ... Selecting previously unselected package libgdbm6t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 37905 files and directories currently installed.) Preparing to unpack .../libgdbm6t64_1.24-2_amd64.deb ... Unpacking libgdbm6t64:amd64 (1.24-2) ... dpkg: libgdbm-compat4:amd64: dependency problems, but removing anyway as you requested: libperl5.36:amd64 depends on libgdbm-compat4 (>= 1.18-3). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 37912 files and directories currently installed.) Removing libgdbm-compat4:amd64 (1.23-3) ... Selecting previously unselected package libgdbm-compat4t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 37906 files and directories currently installed.) Preparing to unpack .../libgdbm-compat4t64_1.24-2_amd64.deb ... Unpacking libgdbm-compat4t64:amd64 (1.24-2) ... Selecting previously unselected package libperl5.40:amd64. Preparing to unpack .../libperl5.40_5.40.0-7_amd64.deb ... Unpacking libperl5.40:amd64 (5.40.0-7) ... Preparing to unpack .../perl-base_5.40.0-7_amd64.deb ... Unpacking perl-base (5.40.0-7) over (5.36.0-7+deb12u1) ... Setting up perl-base (5.40.0-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38437 files and directories currently installed.) Preparing to unpack .../debconf_1.5.87_all.deb ... Unpacking debconf (1.5.87) over (1.5.82) ... Setting up debconf (1.5.87) ... Installing new version of config file /etc/debconf.conf ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38436 files and directories currently installed.) Preparing to unpack .../libpam0g_1.5.3-7+b1_amd64.deb ... Unpacking libpam0g:amd64 (1.5.3-7+b1) over (1.5.2-6+deb12u1) ... Setting up libpam0g:amd64 (1.5.3-7+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38436 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.5.3-7+b1_amd64.deb ... Unpacking libpam-modules-bin (1.5.3-7+b1) over (1.5.2-6+deb12u1) ... Setting up libpam-modules-bin (1.5.3-7+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38436 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.5.3-7+b1_amd64.deb ... Unpacking libpam-modules:amd64 (1.5.3-7+b1) over (1.5.2-6+deb12u1) ... dpkg: warning: unable to delete old directory '/lib/x86_64-linux-gnu/security': Directory not empty Setting up libpam-modules:amd64 (1.5.3-7+b1) ... Installing new version of config file /etc/security/namespace.init ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38437 files and directories currently installed.) Preparing to unpack .../libacl1_2.3.2-2+b1_amd64.deb ... Unpacking libacl1:amd64 (2.3.2-2+b1) over (2.3.1-3) ... Setting up libacl1:amd64 (2.3.2-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38438 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.5.2-2_amd64.deb ... Unpacking libattr1:amd64 (1:2.5.2-2) over (1:2.5.1-4) ... Setting up libattr1:amd64 (1:2.5.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38438 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.7-2_all.deb ... Unpacking libsemanage-common (3.7-2) over (3.4-1) ... Setting up libsemanage-common (3.7-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38437 files and directories currently installed.) Preparing to unpack .../libsepol2_3.7-1_amd64.deb ... Unpacking libsepol2:amd64 (3.7-1) over (3.4-2.1) ... Setting up libsepol2:amd64 (3.7-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38437 files and directories currently installed.) Preparing to unpack .../libsemanage2_3.7-2+b1_amd64.deb ... Unpacking libsemanage2:amd64 (3.7-2+b1) over (3.4-1+b5) ... Setting up libsemanage2:amd64 (3.7-2+b1) ... (Reading database ... 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Unpacking libnghttp2-14:amd64 (1.64.0-1) over (1.52.0-1+deb12u2) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../3-libcurl4t64_8.11.0-1_amd64.deb ... Unpacking libcurl4t64:amd64 (8.11.0-1) ... Preparing to unpack .../4-libaec0_1.1.3-1+b1_amd64.deb ... Unpacking libaec0:amd64 (1.1.3-1+b1) over (1.0.6-1+b1) ... Preparing to unpack .../5-libsz2_1.1.3-1+b1_amd64.deb ... Unpacking libsz2:amd64 (1.1.3-1+b1) over (1.0.6-1+b1) ... dpkg: libssl3:amd64: dependency problems, but removing anyway as you requested: libpython3.11-minimal:amd64 depends on libssl3 (>= 3.0.0). (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 38412 files and directories currently installed.) Preparing to unpack .../openssl-provider-legacy_3.3.2-2_amd64.deb ... Unpacking openssl-provider-legacy (3.3.2-2) ... Selecting previously unselected package libssl3t64:amd64. Preparing to unpack .../libssl3t64_3.3.2-2_amd64.deb ... Unpacking libssl3t64:amd64 (3.3.2-2) ... Setting up libssl3t64:amd64 (3.3.2-2) ... Setting up openssl-provider-legacy (3.3.2-2) ... (Reading database ... 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Setting up bash (5.2.32-1+b2) ... Installing new version of config file /etc/bash.bashrc ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40124 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.2-11_amd64.deb ... Unpacking bsdutils (1:2.40.2-11) over (1:2.38.1-5+deb12u2) ... Setting up bsdutils (1:2.40.2-11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40125 files and directories currently installed.) Preparing to unpack .../archives/usrmerge_39_all.deb ... Unpacking usrmerge (39) over (37~deb12u1) ... Setting up perl-modules-5.40 (5.40.0-7) ... Setting up libgdbm6t64:amd64 (1.24-2) ... Setting up libgdbm-compat4t64:amd64 (1.24-2) ... Setting up libperl5.40:amd64 (5.40.0-7) ... Setting up perl (5.40.0-7) ... Setting up usrmerge (39) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40125 files and directories currently installed.) Preparing to unpack .../coreutils_9.5-1+b1_amd64.deb ... Unpacking coreutils (9.5-1+b1) over (9.1-1) ... Setting up coreutils (9.5-1+b1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40131 files and directories currently installed.) Preparing to unpack .../dpkg_1.22.11_amd64.deb ... Unpacking dpkg (1.22.11) over (1.21.22) ... Setting up dpkg (1.22.11) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40116 files and directories currently installed.) Preparing to unpack .../gzip_1.12-1.1_amd64.deb ... Unpacking gzip (1.12-1.1) over (1.12-1) ... dpkg: warning: old file '/bin/uncompress' is the same as several new files! (both '/usr/bin/gunzip' and '/usr/bin/uncompress') dpkg: warning: old file '/bin/gunzip' is the same as several new files! (both '/usr/bin/gunzip' and '/usr/bin/uncompress') Setting up gzip (1.12-1.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40116 files and directories currently installed.) Preparing to unpack .../hostname_3.25_amd64.deb ... Unpacking hostname (3.25) over (3.23+nmu1) ... Setting up hostname (3.25) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40116 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.5.3-7_all.deb ... Unpacking libpam-runtime (1.5.3-7) over (1.5.2-6+deb12u1) ... Setting up libpam-runtime (1.5.3-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40115 files and directories currently installed.) Preparing to unpack .../login_1%3a4.16.0-2+really2.40.2-11_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.2-11) over (1:4.13+dfsg1-1+b1) ... Setting up login (1:4.16.0-2+really2.40.2-11) ... Installing new version of config file /etc/pam.d/login ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40042 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.5-2+b1_amd64.deb ... Unpacking libncursesw6:amd64 (6.5-2+b1) over (6.4-4) ... Preparing to unpack .../libtinfo6_6.5-2+b1_amd64.deb ... Unpacking libtinfo6:amd64 (6.5-2+b1) over (6.4-4) ... Setting up libtinfo6:amd64 (6.5-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40043 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.5-2+b1_amd64.deb ... Unpacking ncurses-bin (6.5-2+b1) over (6.4-4) ... Setting up ncurses-bin (6.5-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40044 files and directories currently installed.) Preparing to unpack .../archives/sed_4.9-2_amd64.deb ... Unpacking sed (4.9-2) over (4.9-1) ... Setting up sed (4.9-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40044 files and directories currently installed.) Preparing to unpack .../libblkid1_2.40.2-11_amd64.deb ... Unpacking libblkid1:amd64 (2.40.2-11) over (2.38.1-5+deb12u2) ... Setting up libblkid1:amd64 (2.40.2-11) ... (Reading database ... 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Adding 'diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra' Unpacking util-linux-extra (2.40.2-11) over (2.38.1-5+deb12u2) ... dpkg: warning: unable to delete old directory '/usr/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/usr/lib/udev': Directory not empty dpkg: warning: unable to delete old directory '/etc/init.d': Directory not empty Setting up util-linux-extra (2.40.2-11) ... (Reading database ... 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(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 40055 files and directories currently installed.) Preparing to unpack .../00-libgomp1_14.2.0-8_amd64.deb ... Unpacking libgomp1:amd64 (14.2.0-8) over (12.2.0-14) ... Preparing to unpack .../01-libitm1_14.2.0-8_amd64.deb ... Unpacking libitm1:amd64 (14.2.0-8) over (12.2.0-14) ... Preparing to unpack .../02-libatomic1_14.2.0-8_amd64.deb ... Unpacking libatomic1:amd64 (14.2.0-8) over (12.2.0-14) ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 25666 files and directories currently installed.) Preparing to unpack .../libboost1.83-dev_1.83.0-3.2_amd64.deb ... Unpacking libboost1.83-dev:amd64 (1.83.0-3.2) ... Preparing to unpack .../logsave_1.47.1-1+b1_amd64.deb ... Unpacking logsave (1.47.1-1+b1) over (1.47.0-2) ... dpkg: libext2fs2:amd64: dependency problems, but removing anyway as you requested: e2fsprogs depends on libext2fs2 (= 1.47.0-2). (Reading database ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.1-1+b1) ... Setting up libcom-err2:amd64 (1.47.1-1+b1) ... Setting up libext2fs2t64:amd64 (1.47.1-1+b1) ... (Reading database ... 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Unpacking e2fsprogs (1.47.1-1+b1) over (1.47.0-2) ... dpkg: warning: unable to delete old directory '/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/udev': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd': Directory not empty Preparing to unpack .../readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) over (8.2-1.3) ... dpkg: libreadline8:amd64: dependency problems, but removing anyway as you requested: libpython3.9-stdlib:amd64 depends on libreadline8 (>= 7.0~beta). libpython3.11-stdlib:amd64 depends on libreadline8 (>= 7.0~beta). (Reading database ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../1-libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Preparing to unpack .../2-libexpat1-dev_2.6.4-1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.6.4-1) over (2.5.0-1+deb12u1) ... Preparing to unpack .../3-libexpat1_2.6.4-1_amd64.deb ... 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Processing triggers for debianutils (5.20) ... 1m30.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-yf', 'dist-upgrade'] 1m30.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m31.5s DUMP: 53791701bc0f87b5169ce18cb20163dd - 1m31.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m31.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'show', '--no-all-versions', 'python3-biom-format'] 1m31.6s DUMP: Package: python3-biom-format Source: python-biom-format (2.1.16-1) Version: 2.1.16-1+b2 Installed-Size: 1140 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: biom-format-tools Depends: python3-h5py, python3-numpy (>= 1:1.25.0), python3-numpy-abi9, python3 (<< 3.14), python3 (>= 3.12~), python3-click, python3-pandas, python3-scipy, python3:any, libc6 (>= 2.4) Suggests: python-biom-format-doc Description-en: Biological Observation Matrix (BIOM) format (Python 3) The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. . The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. . This package provides the BIOM format library for the Python 3 interpreter. Description-md5: a8e1165fb97cc05bc8c23295225341cd Homepage: https://biom-format.org/ Section: python Priority: optional Filename: pool/main/p/python-biom-format/python3-biom-format_2.1.16-1+b2_amd64.deb Size: 175612 MD5sum: 2d13a2e68a72541ffd216bf24f3e7eef SHA256: 2dab44fe0bde84d73dcfd8b40c84fc43d1c37466a2ca056e2c0e65685bf232af 1m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'show', '--no-all-versions', 'python3-biom-format'] 1m31.6s INFO: apt-cache knows about the following packages: python3-biom-format 1m31.6s INFO: Running scripts pre_install 1m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_database-server'] 1m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_database-server'] 1m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_exceptions'] 1m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_exceptions'] 1m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_extras'] 1m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_extras'] 1m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture'] 1m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture'] 1m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy'] 1m31.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy'] 1m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy', 'python3-biom-format'] 1m31.7s DUMP: python3-biom-format: Installed: 2.1.16-1+b2 Candidate: 2.1.16-1+b2 Version table: *** 2.1.16-1+b2 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 100 /var/lib/dpkg/status 1m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy', 'python3-biom-format'] 1m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-y', 'install', 'python3-biom-format'] 1m32.0s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-biom-format is already the newest version (2.1.16-1+b2). The following packages were automatically installed and are no longer required: cython3 libboost-dev libboost1.83-dev libmpdec3 libnsl-dev libopenblas-dev libopenblas-pthread-dev libopenblas0 libperl5.36 libpython3-all-dev libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.9-minimal libpython3.9-stdlib libtirpc-dev libxsimd-dev perl-modules-5.36 python3-all python3-all-dev python3-beniget python3-future python3-gast python3-lib2to3 python3-ply python3-pythran python3-six python3.11 python3.11-dev python3.11-minimal python3.9 python3.9-minimal xtl-dev Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-y', 'install', 'python3-biom-format'] 1m32.0s INFO: Running scripts post_install 1m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_install_exceptions'] 1m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_install_exceptions'] 1m32.0s INFO: Running scripts post_distupgrade 1m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_exceptions'] 1m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_exceptions'] 1m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_zz_backports'] 1m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_distupgrade_zz_backports'] 1m32.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m33.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m33.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m34.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m34.7s INFO: Running scripts pre_install 1m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_database-server'] 1m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_database-server'] 1m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_exceptions'] 1m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_exceptions'] 1m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_extras'] 1m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_extras'] 1m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture'] 1m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture'] 1m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy'] 1m34.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy'] 1m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy', 'python3-biom-format'] 1m34.7s DUMP: python3-biom-format: Installed: 2.1.16-1+b2 Candidate: 2.1.16-1+b2 Version table: *** 2.1.16-1+b2 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 100 /var/lib/dpkg/status 1m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-cache', 'policy', 'python3-biom-format'] 1m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-y', 'install', 'python3-biom-format=2.1.16-1+b2'] 1m35.0s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-biom-format is already the newest version (2.1.16-1+b2). The following packages were automatically installed and are no longer required: cython3 libboost-dev libboost1.83-dev libmpdec3 libnsl-dev libopenblas-dev libopenblas-pthread-dev libopenblas0 libperl5.36 libpython3-all-dev libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.9-minimal libpython3.9-stdlib libtirpc-dev libxsimd-dev perl-modules-5.36 python3-all python3-all-dev python3-beniget python3-future python3-gast python3-lib2to3 python3-ply python3-pythran python3-six python3.11 python3.11-dev python3.11-minimal python3.9 python3.9-minimal xtl-dev Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', '-y', 'install', 'python3-biom-format=2.1.16-1+b2'] 1m35.0s INFO: Running scripts post_install 1m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_install_exceptions'] 1m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_install_exceptions'] 1m35.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m36.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m36.5s INFO: /lib converted to /usr/lib by /usr merge 1m36.5s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 1m37.9s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', '-ac', '--ignore-obsolete'] 1m41.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', '-ac', '--ignore-obsolete'] 1m41.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m41.1s DUMP: 0.15.6 1m41.1s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m41.1s INFO: Running adequate version 0.15.6 now. 1m41.1s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'python3-biom-format'] 1m41.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'python3-biom-format'] 1m41.1s INFO: Running scripts pre_remove 1m41.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m41.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m41.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m41.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m41.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m45.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m45.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m45.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m45.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_exceptions'] 1m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/pre_remove_exceptions'] 1m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m45.2s DUMP: install ok installed adduser adduser 3.137 install ok installed apt apt 2.9.10 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.32-1+b2 install ok installed binutils binutils 2.43.1-5 install ok installed binutils-common:amd64 binutils-common 2.43.1-5 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.43.1-5 install ok installed bsdutils bsdutils 1:2.40.2-11 install ok installed coreutils coreutils 9.5-1+b1 install ok installed cpp cpp 4:14.2.0-1 install ok installed cpp-12 cpp-12 12.4.0-2 install ok installed cpp-14 cpp-14 14.2.0-8 install ok installed cpp-14-x86-64-linux-gnu cpp-14-x86-64-linux-gnu 14.2.0-8 install ok installed cpp-x86-64-linux-gnu cpp-x86-64-linux-gnu 4:14.2.0-1 install ok installed cython3 cython3 3.0.11+dfsg-1+b1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1+b1 install ok installed findutils findutils 4.10.0-3 install ok installed g++ g++ 4:14.2.0-1 install ok installed g++-12 g++-12 12.4.0-2 install ok installed g++-14 g++-14 14.2.0-8 install ok installed g++-14-x86-64-linux-gnu g++-14-x86-64-linux-gnu 14.2.0-8 install ok installed g++-x86-64-linux-gnu g++-x86-64-linux-gnu 4:14.2.0-1 install ok installed gcc gcc 4:14.2.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-6 install ok installed gcc-12 gcc-12 12.4.0-2 install ok installed gcc-12-base:amd64 gcc-12-base 12.4.0-2 install ok installed gcc-14 gcc-14 14.2.0-8 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-8 install ok installed gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu 14.2.0-8 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-22 install ok installed gcc-x86-64-linux-gnu gcc-x86-64-linux-gnu 4:14.2.0-1 install ok installed gpgv gpgv 2.2.45-2 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libaec0:amd64 libaec0 1.1.3-1+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.10 install ok installed libasan8:amd64 libasan8 14.2.0-8 install ok installed libatomic1:amd64 libatomic1 14.2.0-8 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.1-3 install ok installed libaudit1:amd64 libaudit1 1:4.0.1-3 install ok installed libbinutils:amd64 libbinutils 2.43.1-5 install ok installed libblas3:amd64 libblas3 3.12.0-3+b1 install ok installed libblkid1:amd64 libblkid1 2.40.2-11 install ok installed libboost-dev:amd64 libboost-dev 1.83.0.2+b2 install ok installed libboost1.83-dev:amd64 libboost1.83-dev 1.83.0-3.2 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b6 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc-dev-bin libc-dev-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libc6-dev:amd64 libc6-dev 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-3+b1 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcc1-0:amd64 libcc1-0 14.2.0-8 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1+b1 install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.36-5 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.43.1-5 install ok installed libctf0:amd64 libctf0 2.43.1-5 install ok installed libcurl4t64:amd64 libcurl4t64 8.11.0-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.273 install ok installed libexpat1:amd64 libexpat1 2.6.4-1 install ok installed libexpat1-dev:amd64 libexpat1-dev 2.6.4-1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1+b1 install ok installed libffi7:amd64 libffi7 3.3-6 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-3 install ok installed libgcc-12-dev:amd64 libgcc-12-dev 12.4.0-2 install ok installed libgcc-14-dev:amd64 libgcc-14-dev 14.2.0-8 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-8 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgdbm-compat4t64:amd64 libgdbm-compat4t64 1.24-2 install ok installed libgdbm6t64:amd64 libgdbm6t64 1.24-2 install ok installed libgfortran5:amd64 libgfortran5 14.2.0-8 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b2 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2+b1 install ok installed libgomp1:amd64 libgomp1 14.2.0-8 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libgprofng0:amd64 libgprofng0 2.43.1-5 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-3 install ok installed libhdf5-103-1t64:amd64 libhdf5-103-1t64 1.10.10+repack-4 install ok installed libhdf5-hl-100t64:amd64 libhdf5-hl-100t64 1.10.10+repack-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libhwasan0:amd64 libhwasan0 14.2.0-8 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed libisl23:amd64 libisl23 0.27-1 install ok installed libitm1:amd64 libitm1 14.2.0-8 install ok installed libjansson4:amd64 libjansson4 2.14-2+b3 install ok installed libjs-jquery libjs-jquery 3.6.1+dfsg+~3.5.14-1 install ok installed libjs-sphinxdoc libjs-sphinxdoc 7.4.7-4 install ok installed libjs-underscore libjs-underscore 1.13.4~dfsg+~1.11.4-3 install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-4 install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-3 install ok installed liblapack3:amd64 liblapack3 3.12.0-3+b1 install ok installed liblbfgsb0:amd64 liblbfgsb0 3.0+dfsg.4-1+b2 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.18+dfsg-3+b1 install ok installed liblsan0:amd64 liblsan0 14.2.0-8 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzf1:amd64 liblzf1 3.6-4+b2 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.2-11 install ok installed libmpc3:amd64 libmpc3 1.3.1-1+b3 install ok installed libmpdec3:amd64 libmpdec3 2.5.1-1 install ok installed libmpfr6:amd64 libmpfr6 4.2.1-1+b2 install ok installed libncursesw6:amd64 libncursesw6 6.5-2+b1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.64.0-1 install ok installed libnsl-dev:amd64 libnsl-dev 1.3.0-3+b3 install ok installed libnsl2:amd64 libnsl2 1.3.0-3+b3 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libopenblas-dev:amd64 libopenblas-dev 0.3.28+ds-3 install ok installed libopenblas-pthread-dev:amd64 libopenblas-pthread-dev 0.3.28+ds-3 install ok installed libopenblas0:amd64 libopenblas0 0.3.28+ds-3 install ok installed libopenblas0-pthread:amd64 libopenblas0-pthread 0.3.28+ds-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2+b1 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b2 install ok installed libpcre3:amd64 libpcre3 2:8.39-15 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-7+deb12u1 install ok installed libperl5.40:amd64 libperl5.40 5.40.0-7 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.2-1.1+b1 install ok installed libpython3-all-dev:amd64 libpython3-all-dev 3.12.6-1 install ok installed libpython3-dev:amd64 libpython3-dev 3.12.6-1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.12.6-1 install ok installed libpython3.11:amd64 libpython3.11 3.11.2-6+deb12u4 install ok installed libpython3.11-dev:amd64 libpython3.11-dev 3.11.2-6+deb12u4 install ok installed libpython3.11-minimal:amd64 libpython3.11-minimal 3.11.2-6+deb12u4 install ok installed libpython3.11-stdlib:amd64 libpython3.11-stdlib 3.11.2-6+deb12u4 install ok installed libpython3.12-dev:amd64 libpython3.12-dev 3.12.7-3 install ok installed libpython3.12-minimal:amd64 libpython3.12-minimal 3.12.7-3 install ok installed libpython3.12-stdlib:amd64 libpython3.12-stdlib 3.12.7-3 install ok installed libpython3.12t64:amd64 libpython3.12t64 3.12.7-3 install ok installed libpython3.9-minimal:amd64 libpython3.9-minimal 3.9.2-1 install ok installed libpython3.9-stdlib:amd64 libpython3.9-stdlib 3.9.2-1 install ok installed libquadmath0:amd64 libquadmath0 14.2.0-8 install ok installed libreadline8t64:amd64 libreadline8t64 8.2-5 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b5 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-8 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-8 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b3 install ok installed libselinux1:amd64 libselinux1 3.7-3+b1 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2+b1 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsframe1:amd64 libsframe1 2.43.1-5 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-11 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-1 install ok installed libss2:amd64 libss2 1.47.1-1+b1 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.1-1 install ok installed libssl1.1:amd64 libssl1.1 1.1.1w-0+deb11u1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstdc++-12-dev:amd64 libstdc++-12-dev 12.4.0-2 install ok installed libstdc++-14-dev:amd64 libstdc++-14-dev 14.2.0-8 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-8 install ok installed libsystemd0:amd64 libsystemd0 256.7-3 install ok installed libsz2:amd64 libsz2 1.1.3-1+b1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libtirpc-common libtirpc-common 1.3.4+ds-1.3 install ok installed libtirpc-dev:amd64 libtirpc-dev 1.3.4+ds-1.3+b1 install ok installed libtirpc3t64:amd64 libtirpc3t64 1.3.4+ds-1.3+b1 install ok installed libtsan2:amd64 libtsan2 14.2.0-8 install ok installed libubsan1:amd64 libubsan1 14.2.0-8 install ok installed libudev1:amd64 libudev1 256.7-3 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libunistring5:amd64 libunistring5 1.2-1+b1 install ok installed libuuid1:amd64 libuuid1 2.40.2-11 install ok installed libxsimd-dev:amd64 libxsimd-dev 13.0.0-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed linux-libc-dev linux-libc-dev 6.11.7-1 install ok installed login login 1:4.16.0-2+really2.40.2-11 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1+b1 install ok installed lsb-base lsb-base 11.6 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed media-types media-types 10.1.0 install ok installed mount mount 2.40.2-11 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed netbase netbase 6.4 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl perl 5.40.0-7 install ok installed perl-base perl-base 5.40.0-7 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-7+deb12u1 install ok installed perl-modules-5.40 perl-modules-5.40 5.40.0-7 install ok installed python3 python3 3.12.6-1 install ok installed python3-all python3-all 3.12.6-1 install ok installed python3-all-dev python3-all-dev 3.12.6-1 install ok installed python3-autocommand python3-autocommand 2.2.2-3 install ok installed python3-beniget python3-beniget 0.4.1-3 install ok installed python3-biom-format python3-biom-format 2.1.16-1+b2 install ok installed python3-click python3-click 8.1.7-2 install ok installed python3-colorama python3-colorama 0.4.6-4 install ok installed python3-dateutil python3-dateutil 2.9.0-3 install ok installed python3-decorator python3-decorator 5.1.1-5 install ok installed python3-dev python3-dev 3.12.6-1 install ok installed python3-future python3-future 0.18.2-6 install ok installed python3-gast python3-gast 0.6.0-1 install ok installed python3-h5py python3-h5py 3.11.0-5 install ok installed python3-h5py-serial python3-h5py-serial 3.11.0-5 install ok installed python3-inflect python3-inflect 7.3.1-2 install ok installed python3-jaraco.context python3-jaraco.context 6.0.0-1 install ok installed python3-jaraco.functools python3-jaraco.functools 4.1.0-1 install ok installed python3-lib2to3 python3-lib2to3 3.12.7-1 install ok installed python3-minimal python3-minimal 3.12.6-1 install ok installed python3-more-itertools python3-more-itertools 10.5.0-1 install ok installed python3-numpy python3-numpy 1:1.26.4+ds-12 install ok installed python3-pandas python3-pandas 2.2.3+dfsg-5 install ok installed python3-pandas-lib:amd64 python3-pandas-lib 2.2.3+dfsg-5+b1 install ok installed python3-pkg-resources python3-pkg-resources 74.1.2-2 install ok installed python3-ply python3-ply 3.11-7 install ok installed python3-pythran python3-pythran 0.16.1+ds-3 install ok installed python3-scipy python3-scipy 1.13.1-5 install ok installed python3-setuptools python3-setuptools 74.1.2-2 install ok installed python3-six python3-six 1.16.0-7 install ok installed python3-typeguard python3-typeguard 4.4.1-1 install ok installed python3-typing-extensions python3-typing-extensions 4.12.2-2 install ok installed python3-tz python3-tz 2024.1-2 install ok installed python3-zipp python3-zipp 3.21.0-1 install ok installed python3.11 python3.11 3.11.2-6+deb12u4 install ok installed python3.11-dev python3.11-dev 3.11.2-6+deb12u4 install ok installed python3.11-minimal python3.11-minimal 3.11.2-6+deb12u4 install ok installed python3.12 python3.12 3.12.7-3 install ok installed python3.12-dev python3.12-dev 3.12.7-3 install ok installed python3.12-minimal python3.12-minimal 3.12.7-3 install ok installed python3.9 python3.9 3.9.2-1 install ok installed python3.9-minimal python3.9-minimal 3.9.2-1 install ok installed readline-common readline-common 8.2-5 install ok installed rpcsvc-proto rpcsvc-proto 1.4.3-1 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-3 install ok installed usrmerge usrmerge 39 install ok installed util-linux util-linux 2.40.2-11 install ok installed util-linux-extra util-linux-extra 2.40.2-11 install ok installed xtl-dev xtl-dev 0.7.7-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.3.dfsg+really1.3.1-1+b1 1m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'cython3', 'g++-', 'g++-12', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-12', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'libaec0:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.83-dev:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libhwasan0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libldap-2.5-0:amd64', 'liblsan0:amd64', 'liblzf1:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpsl5t64:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-dev:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsframe1:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-12-dev:amd64', 'libstdc++-14-dev:amd64', 'libsz2:amd64', 'libtirpc-dev:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'python3', 'python3-all', 'python3-all-dev', 'python3-autocommand', 'python3-beniget', 'python3-click', 'python3-colorama', 'python3-dateutil', 'python3-decorator', 'python3-dev', 'python3-future', 'python3-gast', 'python3-h5py', 'python3-h5py-serial', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-numpy', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3-setuptools', 'python3-six', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-zipp', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'python3.12', 'python3.12-dev', 'python3.12-minimal', 'python3.9', 'python3.9-minimal', 'readline-common', 'rpcsvc-proto', 'xtl-dev', 'zlib1g-dev:amd64', 'python3-biom-format'] 1m49.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: gcc-12-base libperl5.36 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-12 cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu cython3 g++ g++-12 g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-12 gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu libaec0 libasan8 libatomic1 libbinutils libblas3 libboost-dev libboost1.83-dev libbrotli1 libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libcurl4t64 libexpat1 libexpat1-dev libgcc-12-dev libgcc-14-dev libgfortran5 libgomp1 libgprofng0 libhdf5-103-1t64 libhdf5-hl-100t64 libhwasan0 libisl23 libitm1 libjansson4 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 libldap-2.5-0 liblsan0 liblzf1 libmpc3 libmpdec3 libmpfr6 libncursesw6 libnghttp2-14 libnsl-dev libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libpsl5t64 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsframe1 libsqlite3-0 libssh2-1t64 libstdc++-12-dev libstdc++-14-dev libsz2 libtirpc-dev libtsan2 libubsan1 libxsimd-dev linux-libc-dev media-types netbase python3 python3-all python3-all-dev python3-autocommand python3-beniget python3-biom-format python3-click python3-colorama python3-dateutil python3-decorator python3-dev python3-future python3-gast python3-h5py python3-h5py-serial python3-inflect python3-jaraco.context python3-jaraco.functools python3-lib2to3 python3-minimal python3-more-itertools python3-numpy python3-pandas python3-pandas-lib python3-pkg-resources python3-ply python3-pythran python3-scipy python3-setuptools python3-six python3-typeguard python3-typing-extensions python3-tz python3-zipp python3.11 python3.11-dev python3.11-minimal python3.12 python3.12-dev python3.12-minimal python3.9 python3.9-minimal readline-common rpcsvc-proto xtl-dev zlib1g-dev 0 upgraded, 0 newly installed, 143 to remove and 0 not upgraded. After this operation, 1119 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43771 files and directories currently installed.) Removing python3-pythran (0.16.1+ds-3) ... Removing g++ (4:14.2.0-1) ... Removing gcc (4:14.2.0-1) ... Removing g++-12 (12.4.0-2) ... Removing gcc-12 (12.4.0-2) ... Removing g++-x86-64-linux-gnu (4:14.2.0-1) ... Removing gcc-x86-64-linux-gnu (4:14.2.0-1) ... Removing g++-14 (14.2.0-8) ... Removing g++-14-x86-64-linux-gnu (14.2.0-8) ... Removing cpp (4:14.2.0-1) ... Removing cpp-12 (12.4.0-2) ... Removing cpp-x86-64-linux-gnu (4:14.2.0-1) ... Removing cython3 (3.0.11+dfsg-1+b1) ... Removing python3-biom-format (2.1.16-1+b2) ... Removing python3-h5py (3.11.0-5) ... Removing python3-h5py-serial (3.11.0-5) ... Removing libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ... Removing libhdf5-103-1t64:amd64 (1.10.10+repack-4) ... Removing libsz2:amd64 (1.1.3-1+b1) ... Removing libaec0:amd64 (1.1.3-1+b1) ... Removing libboost-dev:amd64 (1.83.0.2+b2) ... Removing libboost1.83-dev:amd64 (1.83.0-3.2) ... Removing libstdc++-14-dev:amd64 (14.2.0-8) ... Removing libstdc++-12-dev:amd64 (12.4.0-2) ... Removing libgcc-12-dev:amd64 (12.4.0-2) ... Removing python3-scipy (1.13.1-5) ... Removing python3-pandas (2.2.3+dfsg-5) ... Removing python3-pandas-lib:amd64 (2.2.3+dfsg-5+b1) ... Removing python3-numpy (1:1.26.4+ds-12) ... Removing liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Removing liblapack3:amd64 (3.12.0-3+b1) ... Removing libblas3:amd64 (3.12.0-3+b1) ... Removing libcurl4t64:amd64 (8.11.0-1) ... Removing libbrotli1:amd64 (1.1.0-2+b6) ... Removing python3.11-dev (3.11.2-6+deb12u4) ... Removing libpython3.11-dev:amd64 (3.11.2-6+deb12u4) ... Removing python3-all-dev (3.12.6-1) ... Removing python3-dev (3.12.6-1) ... Removing python3.12-dev (3.12.7-3) ... Removing python3.9 (3.9.2-1) ... Removing python3.9-minimal (3.9.2-1) ... Removing python3.11 (3.11.2-6+deb12u4) ... Removing python3.11-minimal (3.11.2-6+deb12u4) ... Removing libopenblas-dev:amd64 (0.3.28+ds-3) ... Removing libopenblas-pthread-dev:amd64 (0.3.28+ds-3) ... Removing libopenblas0:amd64 (0.3.28+ds-3) ... Removing libopenblas0-pthread:amd64 (0.3.28+ds-3) ... Removing libgfortran5:amd64 (14.2.0-8) ... Removing libjs-sphinxdoc (7.4.7-4) ... Removing libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Removing libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Removing libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Removing liblzf1:amd64 (3.6-4+b2) ... Removing libpython3.9-stdlib:amd64 (3.9.2-1) ... Removing libmpdec3:amd64 (2.5.1-1) ... Removing libpython3.11:amd64 (3.11.2-6+deb12u4) ... Removing libpython3.11-stdlib:amd64 (3.11.2-6+deb12u4) ... Removing python3-all (3.12.6-1) ... Removing python3-future (0.18.2-6) ... Removing python3-lib2to3 (3.12.7-1) ... Removing python3-setuptools (74.1.2-2) ... Removing libnghttp2-14:amd64 (1.64.0-1) ... Removing libnsl-dev:amd64 (1.3.0-3+b3) ... Removing libpsl5t64:amd64 (0.21.2-1.1+b1) ... Removing libpython3-all-dev:amd64 (3.12.6-1) ... Removing libpython3-dev:amd64 (3.12.6-1) ... Removing libpython3.11-minimal:amd64 (3.11.2-6+deb12u4) ... Removing libpython3.9-minimal:amd64 (3.9.2-1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Removing libssh2-1t64:amd64 (1.11.1-1) ... Removing libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) ... Removing libxsimd-dev:amd64 (13.0.0-1) ... Removing python3-pkg-resources (74.1.2-2) ... Removing python3-autocommand (2.2.2-3) ... Removing python3-beniget (0.4.1-3) ... Removing python3-click (8.1.7-2) ... Removing python3-colorama (0.4.6-4) ... Removing python3-dateutil (2.9.0-3) ... Removing python3-decorator (5.1.1-5) ... Removing python3-gast (0.6.0-1) ... Removing python3-inflect (7.3.1-2) ... Removing python3-jaraco.context (6.0.0-1) ... Removing python3-jaraco.functools (4.1.0-1) ... Removing python3-more-itertools (10.5.0-1) ... Removing python3-ply (3.11-7) ... Removing python3-six (1.16.0-7) ... Removing python3-typeguard (4.4.1-1) ... Removing python3-typing-extensions (4.12.2-2) ... Removing python3-tz (2024.1-2) ... Removing python3-zipp (3.21.0-1) ... Removing xtl-dev (0.7.7-1) ... Removing gcc-14 (14.2.0-8) ... Removing binutils (2.43.1-5) ... Removing gcc-14-x86-64-linux-gnu (14.2.0-8) ... Removing binutils-x86-64-linux-gnu (2.43.1-5) ... Removing libgprofng0:amd64 (2.43.1-5) ... Removing libctf0:amd64 (2.43.1-5) ... Removing libbinutils:amd64 (2.43.1-5) ... Removing binutils-common:amd64 (2.43.1-5) ... Removing cpp-14 (14.2.0-8) ... Removing cpp-14-x86-64-linux-gnu (14.2.0-8) ... Removing libgcc-14-dev:amd64 (14.2.0-8) ... Removing libasan8:amd64 (14.2.0-8) ... Removing libatomic1:amd64 (14.2.0-8) ... Removing libpython3.12-dev:amd64 (3.12.7-3) ... Removing zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Removing libexpat1-dev:amd64 (2.6.4-1) ... Removing libc6-dev:amd64 (2.40-3) ... Removing libc-dev-bin (2.40-3) ... Removing libcc1-0:amd64 (14.2.0-8) ... Removing libcrypt-dev:amd64 (1:4.4.36-5) ... Removing libctf-nobfd0:amd64 (2.43.1-5) ... Removing libgomp1:amd64 (14.2.0-8) ... Removing libhwasan0:amd64 (14.2.0-8) ... Removing libisl23:amd64 (0.27-1) ... Removing libitm1:amd64 (14.2.0-8) ... Removing libjansson4:amd64 (2.14-2+b3) ... Removing liblsan0:amd64 (14.2.0-8) ... Removing libmpc3:amd64 (1.3.1-1+b3) ... Removing libmpfr6:amd64 (4.2.1-1+b2) ... Removing python3 (3.12.6-1) ... Removing python3.12 (3.12.7-3) ... Removing libpython3-stdlib:amd64 (3.12.6-1) ... Removing python3-minimal (3.12.6-1) ... Removing python3.12-minimal (3.12.7-3) ... Removing libpython3.12t64:amd64 (3.12.7-3) ... Removing libquadmath0:amd64 (14.2.0-8) ... Removing libsframe1:amd64 (2.43.1-5) ... Removing libtsan2:amd64 (14.2.0-8) ... Removing libubsan1:amd64 (14.2.0-8) ... Removing linux-libc-dev (6.11.7-1) ... Removing rpcsvc-proto (1.4.3-1) ... Removing libexpat1:amd64 (2.6.4-1) ... Removing libpython3.12-stdlib:amd64 (3.12.7-3) ... find: '/usr/lib/python3': No such file or directory Removing libncursesw6:amd64 (6.5-2+b1) ... Removing libpython3.12-minimal:amd64 (3.12.7-3) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.2-5) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsqlite3-0:amd64 (3.46.1-1) ... Removing media-types (10.1.0) ... Removing netbase (6.4) ... Removing readline-common (8.2-5) ... Processing triggers for libc-bin (2.40-3) ... 1m49.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'cython3', 'g++-', 'g++-12', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-12', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'libaec0:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.83-dev:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libhwasan0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libldap-2.5-0:amd64', 'liblsan0:amd64', 'liblzf1:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpsl5t64:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-dev:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsframe1:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-12-dev:amd64', 'libstdc++-14-dev:amd64', 'libsz2:amd64', 'libtirpc-dev:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'python3', 'python3-all', 'python3-all-dev', 'python3-autocommand', 'python3-beniget', 'python3-click', 'python3-colorama', 'python3-dateutil', 'python3-decorator', 'python3-dev', 'python3-future', 'python3-gast', 'python3-h5py', 'python3-h5py-serial', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-numpy', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3-setuptools', 'python3-six', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-zipp', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'python3.12', 'python3.12-dev', 'python3.12-minimal', 'python3.9', 'python3.9-minimal', 'readline-common', 'rpcsvc-proto', 'xtl-dev', 'zlib1g-dev:amd64', 'python3-biom-format'] 1m49.8s INFO: Running scripts post_remove 1m49.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_remove_exceptions'] 1m49.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_remove_exceptions'] 1m49.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'cython3', 'g++', 'g++-12', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-12', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'libaec0:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.83-dev:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libhwasan0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libldap-2.5-0:amd64', 'liblsan0:amd64', 'liblzf1:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpsl5t64:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-dev:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsframe1:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-12-dev:amd64', 'libstdc++-14-dev:amd64', 'libsz2:amd64', 'libtirpc-dev:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'python3', 'python3-all', 'python3-all-dev', 'python3-autocommand', 'python3-beniget', 'python3-click', 'python3-colorama', 'python3-dateutil', 'python3-decorator', 'python3-dev', 'python3-future', 'python3-gast', 'python3-h5py', 'python3-h5py-serial', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-numpy', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3-setuptools', 'python3-six', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-zipp', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'python3.12', 'python3.12-dev', 'python3.12-minimal', 'python3.9', 'python3.9-minimal', 'readline-common', 'rpcsvc-proto', 'xtl-dev', 'zlib1g-dev:amd64'] 1m49.9s DUMP: dpkg: warning: ignoring request to remove binutils which isn't installed (Reading database ... 9548 files and directories currently installed.) Purging configuration files for binutils-common:amd64 (2.43.1-5) ... dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed Purging configuration files for cpp (4:14.2.0-1) ... dpkg: warning: ignoring request to remove cpp-12 which isn't installed dpkg: warning: ignoring request to remove cpp-14 which isn't installed dpkg: warning: ignoring request to remove cpp-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove cpp-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove cython3 which isn't installed dpkg: warning: ignoring request to remove g++ which isn't installed dpkg: warning: ignoring request to remove g++-12 which isn't installed dpkg: warning: ignoring request to remove g++-14 which isn't installed dpkg: warning: ignoring request to remove g++-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove g++-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-12 which isn't installed dpkg: warning: ignoring request to remove gcc-14 which isn't installed dpkg: warning: ignoring request to remove gcc-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gcc-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libasan8 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libbinutils which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libboost-dev which isn't installed dpkg: warning: ignoring request to remove libboost1.83-dev which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed Purging configuration files for libcrypt-dev:amd64 (1:4.4.36-5) ... dpkg: warning: ignoring request to remove libctf-nobfd0 which isn't installed dpkg: warning: ignoring request to remove libctf0 which isn't installed dpkg: warning: ignoring request to remove libcurl4t64 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libexpat1-dev which isn't installed dpkg: warning: ignoring request to remove libgcc-12-dev which isn't installed dpkg: warning: ignoring request to remove libgcc-14-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgprofng0 which isn't installed dpkg: warning: ignoring request to remove libhdf5-103-1t64 which isn't installed dpkg: warning: ignoring request to remove libhdf5-hl-100t64 which isn't installed dpkg: warning: ignoring request to remove libhwasan0 which isn't installed dpkg: warning: ignoring request to remove libisl23 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjansson4 which isn't installed Purging configuration files for libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... dpkg: warning: ignoring request to remove libjs-sphinxdoc which isn't installed dpkg: warning: ignoring request to remove libjs-underscore which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblbfgsb0 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove liblzf1 which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpdec3 which isn't installed dpkg: warning: ignoring request to remove libmpfr6 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnsl-dev which isn't installed dpkg: warning: ignoring request to remove libopenblas-dev which isn't installed dpkg: warning: ignoring request to remove libopenblas-pthread-dev which isn't installed dpkg: warning: ignoring request to remove libopenblas0 which isn't installed dpkg: warning: ignoring request to remove libopenblas0-pthread which isn't installed dpkg: warning: ignoring request to remove libpsl5t64 which isn't installed dpkg: warning: ignoring request to remove libpython3-all-dev which isn't installed dpkg: warning: ignoring request to remove libpython3-dev which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3.11 which isn't installed dpkg: warning: ignoring request to remove libpython3.11-dev which isn't installed Purging configuration files for libpython3.11-minimal:amd64 (3.11.2-6+deb12u4) ... dpkg: warning: ignoring request to remove libpython3.11-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3.12-dev which isn't installed Purging configuration files for libpython3.12-minimal:amd64 (3.12.7-3) ... dpkg: warning: ignoring request to remove libpython3.12-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3.12t64 which isn't installed Purging configuration files for libpython3.9-minimal:amd64 (3.9.2-1) ... dpkg: warning: ignoring request to remove libpython3.9-stdlib which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed Purging configuration files for libreadline8t64:amd64 (8.2-5) ... dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsframe1 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1t64 which isn't installed dpkg: warning: ignoring request to remove libstdc++-12-dev which isn't installed dpkg: warning: ignoring request to remove libstdc++-14-dev which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed dpkg: warning: ignoring request to remove libtirpc-dev which isn't installed dpkg: warning: ignoring request to remove libtsan2 which isn't installed dpkg: warning: ignoring request to remove libubsan1 which isn't installed dpkg: warning: ignoring request to remove libxsimd-dev which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed Purging configuration files for media-types (10.1.0) ... Purging configuration files for netbase (6.4) ... Purging configuration files for python3 (3.12.6-1) ... dpkg: warning: ignoring request to remove python3-all which isn't installed dpkg: warning: ignoring request to remove python3-all-dev which isn't installed dpkg: warning: ignoring request to remove python3-autocommand which isn't installed dpkg: warning: ignoring request to remove python3-beniget which isn't installed dpkg: warning: ignoring request to remove python3-click which isn't installed dpkg: warning: ignoring request to remove python3-colorama which isn't installed dpkg: warning: ignoring request to remove python3-dateutil which isn't installed dpkg: warning: ignoring request to remove python3-decorator which isn't installed dpkg: warning: ignoring request to remove python3-dev which isn't installed dpkg: warning: ignoring request to remove python3-future which isn't installed dpkg: warning: ignoring request to remove python3-gast which isn't installed dpkg: warning: ignoring request to remove python3-h5py which isn't installed dpkg: warning: ignoring request to remove python3-h5py-serial which isn't installed dpkg: warning: ignoring request to remove python3-inflect which isn't installed dpkg: warning: ignoring request to remove python3-jaraco.context which isn't installed dpkg: warning: ignoring request to remove python3-jaraco.functools which isn't installed dpkg: warning: ignoring request to remove python3-lib2to3 which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-more-itertools which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-pandas which isn't installed dpkg: warning: ignoring request to remove python3-pandas-lib which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-ply which isn't installed dpkg: warning: ignoring request to remove python3-pythran which isn't installed dpkg: warning: ignoring request to remove python3-scipy which isn't installed dpkg: warning: ignoring request to remove python3-setuptools which isn't installed dpkg: warning: ignoring request to remove python3-six which isn't installed dpkg: warning: ignoring request to remove python3-typeguard which isn't installed dpkg: warning: ignoring request to remove python3-typing-extensions which isn't installed dpkg: warning: ignoring request to remove python3-tz which isn't installed dpkg: warning: ignoring request to remove python3-zipp which isn't installed dpkg: warning: ignoring request to remove python3.11 which isn't installed dpkg: warning: ignoring request to remove python3.11-dev which isn't installed Purging configuration files for python3.11-minimal (3.11.2-6+deb12u4) ... dpkg: warning: ignoring request to remove python3.12 which isn't installed dpkg: warning: ignoring request to remove python3.12-dev which isn't installed Purging configuration files for python3.12-minimal (3.12.7-3) ... dpkg: warning: ignoring request to remove python3.9 which isn't installed Purging configuration files for python3.9-minimal (3.9.2-1) ... Purging configuration files for readline-common (8.2-5) ... dpkg: warning: ignoring request to remove rpcsvc-proto which isn't installed dpkg: warning: ignoring request to remove xtl-dev which isn't installed dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed 1m49.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'cython3', 'g++', 'g++-12', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-12', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'libaec0:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.83-dev:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libhwasan0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libldap-2.5-0:amd64', 'liblsan0:amd64', 'liblzf1:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpsl5t64:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-dev:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsframe1:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-12-dev:amd64', 'libstdc++-14-dev:amd64', 'libsz2:amd64', 'libtirpc-dev:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'python3', 'python3-all', 'python3-all-dev', 'python3-autocommand', 'python3-beniget', 'python3-click', 'python3-colorama', 'python3-dateutil', 'python3-decorator', 'python3-dev', 'python3-future', 'python3-gast', 'python3-h5py', 'python3-h5py-serial', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-numpy', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3-setuptools', 'python3-six', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-zipp', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'python3.12', 'python3.12-dev', 'python3.12-minimal', 'python3.9', 'python3.9-minimal', 'readline-common', 'rpcsvc-proto', 'xtl-dev', 'zlib1g-dev:amd64'] 1m49.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg', '--purge', 'python3-biom-format'] 1m50.0s DUMP: dpkg: warning: ignoring request to remove python3-biom-format which isn't installed 1m50.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg', '--purge', 'python3-biom-format'] 1m50.0s INFO: Running scripts post_purge 1m50.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_purge_exceptions'] 1m50.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_purge_exceptions'] 1m50.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg', '--purge', '--pending'] 1m50.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg', '--purge', '--pending'] 1m50.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg', '--remove', '--pending'] 1m50.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg', '--remove', '--pending'] 1m50.0s INFO: Running scripts post_test 1m50.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_test_exceptions'] 1m50.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'tmp/scripts/post_test_exceptions'] 1m50.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m50.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m50.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg-divert', '--list'] 1m50.3s DUMP: diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64 diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64 diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra 1m50.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'dpkg-divert', '--list'] 1m50.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'clean'] 1m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0', 'apt-get', 'clean'] 1m50.4s DEBUG: Recording chroot state 1m51.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/shm'] 1m51.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/shm'] 1m51.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/console'] 1m51.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/console'] 1m51.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/ptmx'] 1m51.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/ptmx'] 1m51.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/pts'] 1m51.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/dev/pts'] 1m51.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/proc'] 1m51.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0/proc'] 1m51.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m51.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpt1yt0tc0'] 1m51.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpt1yt0tc0 1m51.3s INFO: PASS: Upgrading between Debian distributions. 1m51.3s INFO: PASS: All tests. 1m51.3s INFO: piuparts run ends. ret=0 End: 2024-11-17 09:44:28 GMT