Start: 2025-03-21 21:03:06 GMT Package: med-bio Source: debian-med Version: 3.8.2 Installed-Size: 44 Maintainer: Debian Med Packaging Team Architecture: all Depends: med-config (= 3.8.2), med-tasks (= 3.8.2) Recommends: abacas, abpoa, abyss, acedb-other, adapterremoval, adun-core, aegean, aevol, alien-hunter, alter-sequence-alignment, altree, amap-align, ampliconnoise, andi, anfo, any2fasta, aragorn, arden, ariba, art-nextgen-simulation-tools, artemis, artfastqgenerator, assembly-stats, assemblytics, atac, ataqv, atropos, augur, augustus, autodock, autodock-vina, autogrid, avogadro, axe-demultiplexer, baitfisher, bali-phy, ballview, bamclipper, bamkit, bamtools, bandage, barrnap, bbmap, bcalm, bcftools, beads, beagle, beast-mcmc, beast2-mcmc, bedops, bedtools, belvu, berkeley-express, bifrost, bio-eagle, bio-rainbow, bio-tradis, bio-vcf, bioawk, biobambam2, biosyntax, bitseq, blasr, blixem, bolt-lmm, bowtie, bowtie2, boxshade, bppphyview, bppsuite, brig, btllib-tools, busco, bustools, bwa, canu, cassiopee, cat-bat, cct, cd-hit, cdbfasta, centrifuge, cgview, changeo, chimeraslayer, chromhmm, chromimpute, cif-tools, circlator, circos, clearcut, clonalframe, clonalframeml, clonalorigin, clustalo, clustalw, clustalx, cnvkit, codonw, comet-ms, concavity, conservation-code, coot, covtobed, crac, csb, ctffind, cutadapt, cutesv, daligner, damapper, datamash, dawg, dazzdb, deblur, delly, density-fitness, dextractor, dialign, dialign-tx, diamond-aligner, discosnp, disulfinder, dnaclust, dnarrange, dotter, drop-seq-tools, dssp, dwgsim, e-mem, ea-utils, ecopcr, edtsurf, eigensoft, elph, embassy-domainatrix, embassy-domalign, embassy-domsearch, emboss, emmax, estscan, examl, exonerate, fasta3, fastahack, fastani, fastaq, fastdnaml, fastlink, fastml, fastp, fastq-pair, fastqc, fastqtl, fasttree, ffindex, figtree, filtlong, fitgcp, flash, flexbar, flye, fml-asm, freebayes, freecontact, fsa, fsm-lite, gamgi, garli, garlic, gasic, gatb-core, gbrowse, gdpc, gemma, genometester, genomethreader, genometools, genomicsdb-tools, gentle, gff2aplot, gff2ps, gffread, ggd-utils, ghemical, ghmm, glam2, gmap, grabix, graphlan, grinder, gromacs, gsort, gubbins, gwama, harvest-tools, hhsuite, hilive, hinge, hisat2, hmmer, hmmer2, hyphy-mpi | hyphy-pt, idba, igblast, igor, igv, indelible, infernal, insilicoseq, ipig, iqtree, iva, jaligner, jalview, jellyfish, jellyfish1, jmodeltest, jmol, kalign, kallisto, kaptive, khmer, kineticstools, king-probe, kissplice, kleborate, kma, kmc, kmer, kmerresistance, kraken, kraken2, lagan, lamarc, lamassemble, lambda-align, lambda-align2, last-align, lastz, leaff, lefse, libpwiz-tools, librg-utils-perl, libvcflib-tools, lighter, loki, ltrsift, lucy, lumpy-sv, macs, macsyfinder, maffilter, mafft, malt, mapdamage, mapsembler2, maq, maqview, mash, massxpert, mauve-aligner, mcaller, mecat2, megadepth, megahit, megan-ce, melting, meryl, metabat, metaeuk, metaphlan, metastudent, mhap, microbegps, microbiomeutil, mindthegap, minexpert2, minia, miniasm, minimac4, minimap, minimap2, mipe, mira-assembler, mirtop, mlv-smile, mmb, mmseqs2, mosdepth, mothur, mptp, mrbayes, multiqc, mummer, murasaki | murasaki-mpi, muscle, muscle3, mustang, nanofilt, nanolyse, nanook, nanopolish, nanostat, nanosv, nast-ier, ncbi-acc-download, ncbi-blast+, ncbi-blast+-legacy, ncbi-entrez-direct, ncbi-epcr, ncbi-seg, ncbi-tools-bin, ncbi-tools-x11, ncl-tools, ncoils, neobio, ngmlr, njplot, norsnet, norsp, ntcard, nxtrim, obitools, openms, optimir, pal2nal, paleomix, paml, paraclu, parasail, parsinsert, parsnp, patman, pbdagcon, pbhoney, pbjelly, pbsim, pbsuite, pdb2pqr, perlprimer, perm, pftools, phast, phipack, phybin, phylip, phylonium, phyml, physamp, phyutility, phyx, picard-tools, picopore, pigx-rnaseq, piler, pilercr, pilon, pinfish, pique, pirs, pizzly, placnet, plasmidid, plasmidomics, plasmidseeker, plast, plink, plink1.9, plink2, plip, poa, populations, porechop, poretools, pplacer, prank, predictnls, presto, prime-phylo, primer3, prinseq-lite, proalign, probabel, probalign, probcons, proda, prodigal, profbval, profisis, profnet-bval, profnet-chop, profnet-con, profnet-isis, profnet-md, profnet-norsnet, profnet-prof, profnet-snapfun, profphd-net, profphd-utils, proftmb, progressivemauve, prokka, proteinortho, prottest, provean, pscan-chip, pscan-tfbs, psortb, pullseq, pycoqc, pycorrfit, pyensembl, pyfastx, pymol, pyscanfcs, python3-biomaj3-daemon, python3-bioxtasraw, python3-cogent3, python3-emperor, python3-geneimpacts, python3-gffutils, python3-pairtools, python3-pybedtools, python3-sqt, python3-treetime, pyvcf, qcat, qcumber, qiime, qtltools, quicktree, quorum, qutemol, r-bioc-annotate, r-bioc-biostrings, r-bioc-cner, r-bioc-cummerbund, r-bioc-deseq2, r-bioc-ebseq, r-bioc-edger, r-bioc-genefilter, r-bioc-geoquery, r-bioc-hilbertvis, r-bioc-htsfilter, r-bioc-impute, r-bioc-limma, r-bioc-megadepth, r-bioc-mergeomics, r-bioc-metagenomeseq, r-bioc-mofa, r-bioc-multiassayexperiment, r-bioc-mutationalpatterns, r-bioc-pcamethods, r-bioc-phyloseq, r-bioc-rtracklayer, r-bioc-scater, r-bioc-tfbstools, r-cran-adegenet, r-cran-adephylo, r-cran-alakazam, r-cran-ape, r-cran-bio3d, r-cran-distory, r-cran-genabel, r-cran-kaos, r-cran-phangorn, r-cran-phytools, r-cran-pscbs, r-cran-qtl, r-cran-rotl, r-cran-samr, r-cran-sdmtools, r-cran-seqinr, r-cran-seurat, r-cran-shazam, r-cran-spp, r-cran-tcr, r-cran-tigger, r-cran-treespace, r-cran-tsne, r-cran-vegan, r-cran-webgestaltr, r-cran-wgcna, r-other-ascat, r-other-mott-happy.hbrem, r-other-rajewsky-dropbead, racon, radiant, ragout, rambo-k, rampler, rapmap, rasmol, raster3d, rate4site, raxml, ray, rdp-alignment, rdp-classifier, rdp-readseq, readseq, readucks, reapr, recan, relion, relion-gui, repeatmasker-recon, reprof, resfinder, rna-star, rnahybrid, roary, rockhopper, roguenarok, rsem, rtax, runcircos-gui, saint, salmid, salmon, sambamba, samblaster, samclip, samtools, savvy-util, scoary, scrappie, scrm, scythe, seaview, seer, segemehl, sepp, seqan-apps, seqan-needle, seqan-raptor, seqkit, seqmagick, seqprep, seqsero, seqtk, sga, shasta, shovill, sibelia, sibsim4, sickle, sigma-align, sim4, sim4db, simka, simkamin, ska, skesa, skewer, smalt, smithwaterman, smrtanalysis, snap, snap-aligner, sniffles, snippy, snp-sites, snpeff, snpomatic, snpsift, soapaligner, soapdenovo, soapdenovo2, soapsnp, sortmerna, spaced, spades, spaln, spoa, sprai, spread-phy, sra-toolkit, srst2, ssake, sspace, ssw-align, stacks, staden, staden-io-lib-utils, stringtie, subread, suitename, sumaclust, sumatra, sumtrees, surankco, surpyvor, survivor, svim, swarm, sweed, t-coffee, tabix, tantan, terraphast, theseus, thesias, tiddit, tigr-glimmer, tipp, tm-align, tnseq-transit, toil, tombo, tophat-recondition, topp, toppred, tortoize, trace2dbest, tracetuner, transdecoder, transrate-tools, transtermhp, tree-puzzle | tree-ppuzzle, treeview, treeviewx, trf, trim-galore, trimmomatic, trinityrnaseq, tvc, twopaco, uc-echo, ugene, umap-learn, umis, uncalled, unicycler, unikmer, varna, vcfanno, vcftools, velvet | velvet-long, velvetoptimiser, veryfasttree, vg, virulencefinder, vmatch, vsearch, vt, wham-align, wigeon, wise, xpore, yaha, yanagiba, yanosim Suggests: acacia, adun.app, agat, amos-assembler, amoscmp, annovar, apollo, arachne, arb, arvados, asap, axparafit, axpcoords, bagpipe, bambus, bax2bam, bcbio, biceps, big-blast, bigsdb, bismark, blat, blimps-utils, blobology, braker, btk-core, cactus, caftools, card-rgi, catfishq, cdna-db, cellprofiler, cinema, cluster3, cmap, conda-package-handling, condetri, contrafold, contralign, copycat, covpipe, crossbow, crux-toolkit, cufflinks, cytoscape, dascrubber, dazzle, deepbinner, deepnano, dendroscope, diann, dnapi, e-hive, ecell, embassy-phylip, emboss-explorer, ensembl, ensembl-vep, estferret, euler-sr, euler2, exabayes, exalt, excavator, ffp, fieldbioinformatics, figaro, flappie, forester, forge, galaxy, gatk, gbrowse-syn, genemark, genesplicer, genetrack, genezilla, genographer, gerp++, getdata, glimmerhmm, gmv, gramalign, graphbin, graphmap2, haploview, hawkeye, htqc, hts-nim-tools, idefix, idseq-bench, illustrate, inspect, jbrowse, jigsaw, kempbasu, libhdf5-dev, libhnswlib-dev, lofreq, mach-haplotyper, mage2tab, maker2, manta, marginphase, martj, maude, maxd, medaka, meme, mesquite, metabit, metarep, metastudent-data, metastudent-data-2, migrate, minimus, mirbase, modeller, molekel, mosaik-aligner, mpsqed, mrs, msatfinder, mugsy, mummergpu, mview, nano-snakemake, nanocall, nanocomp, nanoplot, ncbi-magicblast, nextsv, ngila, ngsqctoolkit, nw-align, oases, obo-edit, oligoarrayaux, omegamap, oncofuse, operondb, optitype, paipline, pangolin, partigene, partitionfinder, patristic, pcma, pfaat, phagefinder, phpphylotree, phylographer, phylophlan, phyloviz-core, phylowin, pigx-scrnaseq, pipasic, plato, pomoxis, profit, profphd, prot4est, psipred, pssh2, pufferfish, purple, pyrophosphate-tools, python3-alignlib, python3-anndata, python3-cgecore, python3-cyvcf2, python3-deeptools, python3-deeptoolsintervals, python3-htseq, python3-intake, python3-loompy, python3-nanoget, python3-nanomath, python3-ncls, python3-orange, python3-py2bit, python3-pybel, python3-pychopper, python3-pyfaidx, python3-pyflow, python3-pyranges, python3-pyrle, python3-pysam, python3-tinyalign, q2-alignment, q2-composition, q2-cutadapt, q2-dada2, q2-deblur, q2-demux, q2-diversity, q2-emperor, q2-feature-classifier, q2-feature-table, q2-fragment-insertion, q2-gneiss, q2-longitudinal, q2-metadata, q2-phylogeny, q2-quality-control, q2-quality-filter, q2-sample-classifier, q2-taxa, q2-types, q2-vsearch, q2cli, q2templates, qtlcart, qtlreaper, qualimap, quast, r-bioc-annotationhub, r-bioc-aroma.light, r-bioc-beachmat, r-bioc-biocneighbors, r-bioc-biocsingular, r-bioc-bitseq, r-bioc-ctc, r-bioc-dnacopy, r-bioc-ensembldb, r-bioc-experimenthub, r-bioc-geneplotter, r-bioc-genomicalignments, r-bioc-genomicfiles, r-bioc-genomicranges, r-bioc-go.db, r-bioc-grohmm, r-bioc-gviz, r-bioc-isoformswitchanalyzer, r-bioc-mofa2, r-bioc-org.hs.eg.db, r-bioc-org.mm.eg.db, r-bioc-qusage, r-bioc-savr, r-bioc-singlecellexperiment, r-bioc-structuralvariantannotation, r-bioc-tximport, r-cran-amap, r-cran-biwt, r-cran-boolnet, r-cran-corrplot, r-cran-drinsight, r-cran-dynamictreecut, r-cran-epir, r-cran-fitdistrplus, r-cran-forecast, r-cran-gprofiler2, r-cran-minerva, r-cran-optimalcutpoints, r-cran-parmigene, r-cran-pheatmap, r-cran-qqman, r-cran-rcpphnsw, r-cran-rentrez, r-cran-sctransform, r-other-apmswapp, r-other-fastbaps, raxml-ng, rbs-finder, relion-cuda, relion-gui-cuda, repeatmasker, resfinder-db, roadtrips, roche454ace2caf, rosa, rose, rsat, sailfish, sap, science-workflow, seq-gen, seq-seq-pan, seqcluster, seqwish, sift, signalalign, sina, sistr, situs, solvate, sourmash, sparta, splitstree, ssaha, strap, strap-base, strelka, tab2mage, tacg, tandem-genotypes, taverna, taxinspector, tetra, tide, tigr-glimmer-mg, tn-seqexplorer, tophat, treebuilder3d, tripal, trnascan-se, twain, ufasta, umap, unc-fish, uniprime, varmatch, varscan, vdjtools, vienna-rna, viewmol, vmd, x-tandem-pipeline, zodiac-zeden Description: Debian Med bioinformatics packages Description-md5: 472a50c6504872b123b928f5c13e0f5e Tag: field::biology, role::metapackage, suite::debian Section: metapackages Priority: optional Filename: pool/main/d/debian-med/med-bio_3.8.2_all.deb Size: 14456 MD5sum: f5380e18c3e382999545c72290e58960 SHA256: bb709b117a6a4ef735c52e9640aa18cbc29ea68ea864ce2b9c3d420ee2f2c0b6 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --fail-on-broken-symlinks --install-recommends --scriptsdir /etc/piuparts/scripts-broken-symlinks -i :/usr/lib/libcxx/test/std/experimental/filesystem/Inputs/static_test_env/bad_symlink -i :/usr/share/gocode/src/github.com/Masterminds/glide/testdata/path/x/vendor -i :/usr/share/gocode/src/github.com/constabulary/gb/internal/fileutils/_testdata/copyfile/a/rick -i :/usr/share/gocode/src/github.com/hashicorp/atlas-go/archive/test-fixtures/archive-symlink/link/link -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26231/exe -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26231/ns/mnt -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26231/ns/net -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26232/cwd -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26232/root -i :/etc/systemd/system/display-manager.service -i :/usr/share/civicrm/packages/OpenFlashChart/open-flash-chart.swf -I ':/usr/share/mscore3?-.*/sound/sf[2z]' -i :/var/lib/mender -I ':/etc/.*/supervise' -I '/usr/include/python2\.7_d/.*\.h' -I '/usr/include/python3\..dm/.*\.h' -I '/usr/include/python3\..dm/cpython' -I '/usr/include/python3\..dm/internal' -I ':/usr/lib/jvm/java-.*-openjdk-.*/src\.zip' -I ':/usr/share/doc/kde/HTML/.*/common' -I ':/usr/share/man/man1/(.*-)?python.*-config\.1\.gz' -I ':/usr/lib/openjk/Jedi(Academy|Outcast)/base/assets.\.pk3' -I ':/usr/lib/rtcw/main/.*\.(cfg|pk3)' --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt med-bio=3.8.2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.5.2~202503162239~1.5.1-10-g345d5865 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --fail-on-broken-symlinks --install-recommends --scriptsdir /etc/piuparts/scripts-broken-symlinks -i :/usr/lib/libcxx/test/std/experimental/filesystem/Inputs/static_test_env/bad_symlink -i :/usr/share/gocode/src/github.com/Masterminds/glide/testdata/path/x/vendor -i :/usr/share/gocode/src/github.com/constabulary/gb/internal/fileutils/_testdata/copyfile/a/rick -i :/usr/share/gocode/src/github.com/hashicorp/atlas-go/archive/test-fixtures/archive-symlink/link/link -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26231/exe -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26231/ns/mnt -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26231/ns/net -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26232/cwd -i :/usr/share/gocode/src/github.com/prometheus/procfs/fixtures/26232/root -i :/etc/systemd/system/display-manager.service -i :/usr/share/civicrm/packages/OpenFlashChart/open-flash-chart.swf -I ':/usr/share/mscore3?-.*/sound/sf[2z]' -i :/var/lib/mender -I ':/etc/.*/supervise' -I '/usr/include/python2\.7_d/.*\.h' -I '/usr/include/python3\..dm/.*\.h' -I '/usr/include/python3\..dm/cpython' -I '/usr/include/python3\..dm/internal' -I ':/usr/lib/jvm/java-.*-openjdk-.*/src\.zip' -I ':/usr/share/doc/kde/HTML/.*/common' -I ':/usr/share/man/man1/(.*-)?python.*-config\.1\.gz' -I ':/usr/lib/openjk/Jedi(Academy|Outcast)/base/assets.\.pk3' -I ':/usr/lib/rtcw/main/.*\.(cfg|pk3)' --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt med-bio=3.8.2 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-34-amd64 #1 SMP Debian 5.10.234-1 (2025-02-24) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpc1oi4qhi 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpc1oi4qhi 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/proc'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/proc'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/pts'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/pts'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/ptmx'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/ptmx'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/console'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/console'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/shm'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/shm'] 0m0.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.2s DEBUG: Created policy-rc.d and chmodded it. 0m0.2s DEBUG: Created resolv.conf. 0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpc1oi4qhi/tmp/scripts/ 0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts-broken-symlinks to /srv/piuparts.debian.org/tmp/tmpc1oi4qhi/tmp/scripts/ 0m0.2s INFO: Running scripts post_chroot_unpack 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-get', 'update'] 0m0.7s DUMP: Hit:1 http://deb.debian.org/debian sid InRelease Reading package lists... 0m0.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-get', 'update'] 0m0.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-get', '-yf', 'dist-upgrade'] 0m1.1s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m1.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-get', '-yf', 'dist-upgrade'] 0m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m1.3s DUMP: 1253365d3a7bbd8673dba26232d2836c - 0m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m1.3s INFO: Running scripts post_setup 0m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_dummy_users'] 0m1.7s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_dummy_users'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_fake-essential_unbreak_symlinks'] 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_fake-essential_unbreak_symlinks'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_forbid_home'] 0m1.7s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_forbid_home'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_force-unsafe-io'] 0m1.7s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_force-unsafe-io'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_minimize'] 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_minimize'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_squeeze-backports'] 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_squeeze-backports'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_zz_backports'] 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_setup_zz_backports'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-get', 'clean'] 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-get', 'clean'] 0m1.7s DEBUG: Recording chroot state 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.0s DUMP: install ok installed apt apt 2.9.34 install ok installed base-files base-files 13.7 install ok installed base-passwd base-passwd 3.6.6 install ok installed bash bash 5.2.37-1.1+b1 install ok installed bsdutils bsdutils 1:2.40.4-5 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.91 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.21 install ok installed diffutils diffutils 1:3.10-3 install ok installed dpkg dpkg 1.22.18 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-19 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.13-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.68 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 2.9.34 install ok installed libattr1:amd64 libattr1 1:2.5.2-3 install ok installed libaudit-common libaudit-common 1:4.0.2-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2+b2 install ok installed libblkid1:amd64 libblkid1 2.40.4-5 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.41-6 install ok installed libc6:amd64 libc6 2.41-6 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4+b1 install ok installed libcap2:amd64 libcap2 1:2.75-3 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.38-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.277 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-19 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.1-1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-4 install ok installed liblzma5:amd64 liblzma5 5.6.4-1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.4-5 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-3 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-3 install ok installed libpam-runtime libpam-runtime 1.7.0-3 install ok installed libpam0g:amd64 libpam0g 1.7.0-3 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.45-1 install ok installed libseccomp2:amd64 libseccomp2 2.6.0-2 install ok installed libselinux1:amd64 libselinux1 3.8.1-1 install ok installed libsemanage-common libsemanage-common 3.8.1-1 install ok installed libsemanage2:amd64 libsemanage2 3.8.1-1 install ok installed libsepol2:amd64 libsepol2 3.8.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.4-5 install ok installed libssl3t64:amd64 libssl3t64 3.4.1-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-19 install ok installed libsystemd0:amd64 libsystemd0 257.4-3 install ok installed libtinfo6:amd64 libtinfo6 6.5+20250216-2 install ok installed libudev1:amd64 libudev1 257.4-3 install ok installed libuuid1:amd64 libuuid1 2.40.4-5 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.4-5 install ok installed login.defs login.defs 1:4.17.3-2 install ok installed mawk mawk 1.3.4.20250131-1 install ok installed mount mount 2.40.4-5 install ok installed ncurses-base ncurses-base 6.5+20250216-2 install ok installed ncurses-bin ncurses-bin 6.5+20250216-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.4.1-1 install ok installed passwd passwd 1:4.17.3-2 install ok installed perl-base perl-base 5.40.1-2 install ok installed sed sed 4.9-2 install ok installed sqv sqv 1.2.1-6+b1 install ok installed sysvinit-utils sysvinit-utils 3.14-4 install ok installed tar tar 1.35+dfsg-3.1 install ok installed tzdata tzdata 2025a-2 install ok installed usr-is-merged usr-is-merged 39+nmu2 install ok installed util-linux util-linux 2.40.4-5 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'dpkg-divert', '--list'] 0m2.0s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'dpkg-divert', '--list'] 0m2.0s INFO: Running scripts is_testable 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/is_testable_uninstallable'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/is_testable_uninstallable'] 0m2.0s INFO: apt-cache does not know about any of the requested packages 0m2.0s INFO: Running scripts pre_test 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_test_exceptions'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_test_exceptions'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_test_root_password'] 0m2.0s DUMP: New password: Retype new password: passwd: password updated successfully 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_test_root_password'] 0m2.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi'] 0m2.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi'] 0m2.4s DEBUG: No broken symlinks as far as we can find. 0m2.4s INFO: Running scripts pre_install 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_database-server'] 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_database-server'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_exceptions'] 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_exceptions'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_extras'] 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_extras'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi'] 0m2.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi'] 0m2.8s DEBUG: No broken symlinks as far as we can find. 0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-cache', 'policy'] 0m3.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-cache', 'policy'] 0m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-cache', 'policy', 'med-bio'] 0m3.3s DUMP: med-bio: Installed: (none) Candidate: 3.8.2 Version table: 3.8.2 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m3.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-cache', 'policy', 'med-bio'] 0m3.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-get', '-y', 'install', 'med-bio=3.8.2'] 22m18.0s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: abacas abpoa abyss acedb-other adapterremoval adduser adun-core adwaita-icon-theme aegean aevol aglfn alien-hunter alsa-topology-conf alsa-ucm-conf alter-sequence-alignment altree amap-align ampliconnoise andi ant ant-optional antlr antlr4 any2fasta apache2 apache2-bin apache2-data apache2-utils apbs apbs-data aragorn arden ariba art-nextgen-simulation-tools artemis artfastqgenerator aspell aspell-en assembly-stats assemblytics at-spi2-common at-spi2-core atac ataqv atropos augur augustus augustus-data autodock autodock-vina autogrid avahi-daemon avogadro avogadro-utils axe-demultiplexer baitfisher bali-phy ballview bamclipper bamkit bamtools bandage barrnap bash-completion bbmap bc bcalm bcftools beads beagle beast-mcmc beast2-mcmc bedops bedtools belvu berkeley-express bifrost binfmt-support binutils binutils-common binutils-x86-64-linux-gnu bio-eagle bio-rainbow bio-tradis bio-vcf bioawk biobambam2 bioperl bioperl-run biosquid biosyntax biosyntax-common biosyntax-gedit biosyntax-less biosyntax-vim bitseq black blasr blends-common blixem blt bolt-lmm bowtie bowtie2 boxshade bppphyview bppsuite brig bsdextrautils btllib-tools bubblewrap build-essential busco bustools bwa bzip2 bzip2-doc ca-certificates ca-certificates-java canu cassiopee cat-bat cclib cct cd-hit cdbfasta centrifuge cgview changeo chemical-mime-data chimeraslayer chromhmm chromimpute cif-tools circlator circos circos-tools clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx cnvkit codonw coinor-cbc coinor-libcbc3.1 coinor-libcgl1 coinor-libclp1 coinor-libcoinutils3v5 coinor-libosi1v5 comerr-dev comet-ms concavity conservation-code coot coot-data covtobed cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu crac csb ctffind curl cutadapt cutesv cwl-upgrader cwltool cython3 daligner damapper dascrubber datamash dawg dazzdb dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service deblur default-jdk default-jdk-headless default-jre default-jre-headless delly density-fitness dextractor dialign dialign-tx dialign-tx-data diamond-aligner dictionaries-common dirmngr discosnp disulfinder disulfinder-data dmidecode dmsetup dnaclust dnarrange docbook-xml docutils-common dotter dpkg-dev drop-seq-tools dssp dvipng dvisvgm dwgsim e-mem ea-utils ecopcr edtsurf eigensoft elph emacsen-common embassy-domainatrix embassy-domalign embassy-domsearch emboss emboss-data emboss-lib emmax enchant-2 estscan examl exonerate f2j fakeroot fasta3 fastahack fastani fastaq fastdnaml fastjar fastlink fastml fastp fastq-pair fastqc fastqtl fasttree figtree file filtlong fitgcp flash flexbar flye fml-asm fontconfig fontconfig-config fonts-circos-symbols fonts-cmu fonts-dejavu fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-droid-fallback fonts-font-awesome fonts-freefont-ttf fonts-gfs-baskerville fonts-gfs-porson fonts-glyphicons-halflings fonts-lato fonts-liberation fonts-liberation-sans-narrow fonts-lmodern fonts-lyx fonts-mathjax fonts-noto-color-emoji fonts-noto-core fonts-noto-mono fonts-texgyre fonts-texgyre-math fonts-urw-base35 freebayes freecontact fsa fsm-lite fuse3 g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gamgi garli garlic gasic gatb-core gawk gbrowse gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins gdpc gedit gedit-common gemma genometester genomethreader genometools genometools-common genomicsdb-tools gentle geoclue-2.0 gff2aplot gff2ps gffread gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu ggd-utils ghmm ghostscript gir1.2-amtk-5 gir1.2-atk-1.0 gir1.2-freedesktop gir1.2-gdkpixbuf-2.0 gir1.2-girepository-2.0 gir1.2-glib-2.0 gir1.2-graphene-1.0 gir1.2-gtk-3.0 gir1.2-gtk-4.0 gir1.2-gtksource-300 gir1.2-harfbuzz-0.0 gir1.2-pango-1.0 gir1.2-secret-1 gir1.2-tepl-6 git git-man glam2 glib-networking glib-networking-common glib-networking-services gmap gnome-accessibility-themes gnome-themes-extra gnome-themes-extra-data gnupg gnupg-l10n gnupg-utils gnuplot gnuplot-data gnuplot-qt gnustep-base-common gnustep-base-runtime gnustep-common gnustep-multiarch gnutls-bin gpg gpg-agent gpg-wks-client gpgconf gpgsm gpgv grabix graphlan graphviz grinder groff-base gromacs gromacs-data groovy gsettings-desktop-schemas gsort gstreamer1.0-gl gstreamer1.0-libav gstreamer1.0-plugins-bad gstreamer1.0-plugins-base gstreamer1.0-plugins-good gstreamer1.0-x gtk-update-icon-cache gtk2-engines-pixbuf gubbins gwama harvest-tools hdf5-helpers hdf5-tools hhsuite hhsuite-data hicolor-icon-theme hilive hinge hisat2 hmmer hmmer2 hunspell-en-gb hunspell-en-us hyphy-common hyphy-mpi i965-va-driver ibverbs-providers icu-devtools idba igblast igor igv iio-sensor-proxy imagemagick imagemagick-7-common imagemagick-7.q16 indelible infernal insilicoseq intel-media-va-driver ipig iproute2 iqtree isa-support iso-codes isympy-common isympy3 iva ivy jags jaligner jalview jarwrapper java-common java-wrappers javahelp2 javascript-common jellyfish jellyfish1 jemboss jmodeltest jmol junit4 junit5 kalign kallisto kaptive kaptive-data kineticstools kineticstools-data king-probe kissplice kleborate kma kmc kmer kmer-examples kmerresistance kraken kraken2 krb5-locales krb5-multidev ksh ksh93u+m lagan lamarc lamassemble lambda-align lambda-align2 laptop-detect last-align lastz leaff lefse less lib32gcc-s1 lib32stdc++6 libaa1 libaacs0 libabsl20240722 libace-perl libactivation-java libadwaita-1-0 libaec-dev libaec0 libai-fann-perl libalgorithm-c3-perl libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libalgorithm-munkres-perl libalgorithm-svm-perl libamd-comgr2 libamd3 libamdhip64-5 libandroid-json-org-java libann0 libantlr-java libantlr3-runtime-java libantlr4-runtime-java libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl libaom3 libaopalliance-java libapache-dbi-perl libapache-mime4j-java 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r-cran-class r-cran-classint r-cran-cli r-cran-clipr r-cran-clock r-cran-clubsandwich r-cran-clue r-cran-cluster r-cran-clustergeneration r-cran-cmdfun r-cran-cmprsk r-cran-coda r-cran-codetools r-cran-coin r-cran-collapse r-cran-colorspace r-cran-colourpicker r-cran-combinat r-cran-commonmark r-cran-conflicted r-cran-conquer r-cran-contfrac r-cran-corrplot r-cran-covr r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-credentials r-cran-crosstalk r-cran-crul r-cran-cubelyr r-cran-curl r-cran-cvar r-cran-cvst r-cran-cyclocomp r-cran-data.table r-cran-datawizard r-cran-dbi r-cran-dbitest r-cran-dbplyr r-cran-dbscan r-cran-ddalpha r-cran-ddrtree r-cran-decor r-cran-deldir r-cran-dendextend r-cran-deoptim r-cran-deoptimr r-cran-deriv r-cran-desc r-cran-desolve r-cran-devtools r-cran-dfoptim r-cran-dharma r-cran-diagram r-cran-diagrammer r-cran-dials r-cran-dicedesign r-cran-dichromat r-cran-diffobj r-cran-digest r-cran-dimred r-cran-diptest r-cran-distory r-cran-distr r-cran-distributional r-cran-doby r-cran-docopt r-cran-domc r-cran-doparallel r-cran-dorng r-cran-dotcall64 r-cran-downlit r-cran-dplyr r-cran-dqrng r-cran-drr r-cran-dt r-cran-dtplyr r-cran-dygraphs r-cran-dynamictreecut r-cran-dynlm r-cran-e1071 r-cran-eaf r-cran-earth r-cran-effects r-cran-effectsize r-cran-egg r-cran-ellipse r-cran-ellipsis r-cran-elliptic r-cran-emdbook r-cran-emmeans r-cran-emoa r-cran-energy r-cran-enrichwith r-cran-epi r-cran-epir r-cran-estimability r-cran-estimatr r-cran-etm r-cran-evaluate r-cran-evd r-cran-exactextractr r-cran-expint r-cran-expm r-cran-extradistr r-cran-factoextra r-cran-factominer r-cran-fansi r-cran-farver r-cran-fastcluster r-cran-fastdummies r-cran-fastica r-cran-fastmap r-cran-fastmatch r-cran-fauxpas r-cran-fbasics r-cran-ff r-cran-fgarch r-cran-fields r-cran-filehash r-cran-filelock r-cran-findpython r-cran-fit.models r-cran-fitdistrplus r-cran-flashclust r-cran-flexmix r-cran-flextable r-cran-fnn r-cran-fontawesome r-cran-fontbitstreamvera r-cran-fontliberation r-cran-fontquiver r-cran-forcats r-cran-foreach r-cran-forecast r-cran-foreign r-cran-formatr r-cran-formattable r-cran-formula r-cran-fpc r-cran-fracdiff r-cran-fs r-cran-furrr r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply r-cran-g.data r-cran-gam r-cran-gamm4 r-cran-gap r-cran-gap.datasets r-cran-gargle r-cran-gbm r-cran-gbrd r-cran-gbutils r-cran-gclus r-cran-gdata r-cran-gdtools r-cran-gee r-cran-geepack r-cran-genabel r-cran-genabel.data r-cran-generics r-cran-genoplotr r-cran-geometry r-cran-geosphere r-cran-gert r-cran-getopt r-cran-gfonts r-cran-ggalluvial r-cran-ggally r-cran-gganimate r-cran-ggbeeswarm r-cran-ggdendro r-cran-ggeffects r-cran-ggforce r-cran-ggfortify r-cran-ggplot2 r-cran-ggpubr r-cran-ggrastr r-cran-ggrepel r-cran-ggridges r-cran-ggsci r-cran-ggseqlogo r-cran-ggsignif r-cran-ggstats r-cran-ggthemes r-cran-gh r-cran-git2r r-cran-gitcreds r-cran-glmmtmb r-cran-glmnet r-cran-globaloptions r-cran-globals r-cran-glue r-cran-gmm r-cran-gmp r-cran-goftest r-cran-googledrive r-cran-googlesheets4 r-cran-googlevis r-cran-goplot r-cran-gower r-cran-gparotation r-cran-gplots r-cran-gprofiler2 r-cran-gridbase r-cran-gridextra r-cran-gridgraphics r-cran-gridsvg r-cran-gsa r-cran-gsl r-cran-gss r-cran-gstat r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-haven r-cran-hdf5r r-cran-heatmaply r-cran-here r-cran-hexbin r-cran-highr r-cran-hmisc r-cran-hms r-cran-hsaur3 r-cran-htmltable r-cran-htmltools r-cran-htmlwidgets r-cran-httpcode r-cran-httptest2 r-cran-httpuv r-cran-httr r-cran-httr2 r-cran-hunspell r-cran-hwriter r-cran-hypergeo r-cran-ica r-cran-ids r-cran-igraph r-cran-ini r-cran-inline r-cran-insight r-cran-intergraph r-cran-interp r-cran-intervals r-cran-inum r-cran-ipred r-cran-irace r-cran-irdisplay r-cran-irlba r-cran-isoband r-cran-isocodes r-cran-iterators r-cran-itertools r-cran-jomo r-cran-jpeg r-cran-jquerylib r-cran-jsonld r-cran-jsonlite r-cran-kableextra r-cran-kaos r-cran-kernlab r-cran-kernsmooth r-cran-kmi r-cran-knitr r-cran-ks r-cran-labeling r-cran-labelled r-cran-lambda.r r-cran-lamw r-cran-later r-cran-lattice r-cran-latticeextra r-cran-lava r-cran-lavaan r-cran-lavasearch2 r-cran-lazyeval r-cran-lbfgsb3c r-cran-leaps r-cran-learnbayes r-cran-leidenbase r-cran-lhs r-cran-libcoin r-cran-lifecycle r-cran-linprog r-cran-lintr r-cran-listenv r-cran-littler r-cran-lme4 r-cran-lmertest r-cran-lmtest r-cran-lobstr r-cran-locfit r-cran-logcondens r-cran-logspline r-cran-loo r-cran-lpsolve r-cran-lsmeans r-cran-lubridate r-cran-luminescence r-cran-lwgeom r-cran-magic r-cran-magick r-cran-magrittr r-cran-mapdata r-cran-mapproj r-cran-maps r-cran-maptree r-cran-marginaleffects r-cran-markdown r-cran-mass r-cran-matchit r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels r-cran-matrixstats r-cran-maxlik r-cran-mclogit r-cran-mclust r-cran-mda r-cran-memisc r-cran-memoise r-cran-mertools r-cran-metadat r-cran-metafor r-cran-metap r-cran-mets r-cran-mgcv r-cran-mice r-cran-microbenchmark r-cran-mime r-cran-miniui r-cran-minpack.lm r-cran-minqa r-cran-misc3d r-cran-misctools r-cran-mitml r-cran-mitools r-cran-mixtools r-cran-mlbench r-cran-mlmetrics r-cran-mlmrev r-cran-mlr r-cran-mnormt r-cran-mockery r-cran-modeldata r-cran-modelmetrics r-cran-modelr r-cran-modeltools r-cran-msm r-cran-multcomp r-cran-multcompview r-cran-multicool r-cran-munsell r-cran-mutoss r-cran-mvtnorm r-cran-nanoarrow r-cran-nanotime r-cran-natserv r-cran-ncdf4 r-cran-ncdfgeom r-cran-ncmeta r-cran-network r-cran-nfactors r-cran-nleqslv r-cran-nlme r-cran-nloptr r-cran-nmf r-cran-nnet r-cran-nnls r-cran-numderiv r-cran-officer r-cran-openssl r-cran-openxlsx r-cran-optimparallel r-cran-optimx r-cran-optparse r-cran-ordinal r-cran-packrat r-cran-palmerpenguins r-cran-pammtools r-cran-pan r-cran-pander r-cran-parallelly r-cran-parallelmap r-cran-parameters r-cran-paramhelpers r-cran-party r-cran-partykit r-cran-patchwork r-cran-patrick r-cran-pbapply r-cran-pbivnorm r-cran-pbkrtest r-cran-pbmcapply r-cran-pcapp r-cran-pcict r-cran-pdftools r-cran-pec r-cran-performance r-cran-permute r-cran-phangorn r-cran-pheatmap r-cran-phylobase r-cran-phytools r-cran-pillar r-cran-pingr r-cran-pixmap r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgdown r-cran-pkgkitten r-cran-pkgload r-cran-pkgmaker r-cran-pki r-cran-plm r-cran-plogr r-cran-plot3d r-cran-plotly r-cran-plotmo r-cran-plotrix r-cran-pls r-cran-plumber r-cran-plyr r-cran-png r-cran-polspline r-cran-polyclip r-cran-polycor r-cran-polynom r-cran-poorman r-cran-popepi r-cran-posterior r-cran-powerlaw r-cran-prabclus r-cran-pracma r-cran-praise r-cran-prediction r-cran-prettyunits r-cran-proc r-cran-processx r-cran-prodlim r-cran-profilemodel r-cran-profmem r-cran-profvis r-cran-progress r-cran-progressr r-cran-projpred r-cran-promises r-cran-proxy r-cran-ps r-cran-pscbs r-cran-pscl r-cran-psych r-cran-psychotools r-cran-psychotree r-cran-psychtools r-cran-publish r-cran-purrr r-cran-purrrlyr r-cran-pvclust r-cran-pwr r-cran-qap r-cran-qgam r-cran-qpdf r-cran-qqconf r-cran-qtl r-cran-quadprog r-cran-quantmod r-cran-quantreg r-cran-quickjsr r-cran-qvcalc r-cran-r.cache r-cran-r.devices r-cran-r.methodss3 r-cran-r.oo r-cran-r.rsp r-cran-r.utils r-cran-r6 r-cran-ragg r-cran-randomforest r-cran-ranger r-cran-rann r-cran-rappdirs r-cran-raster r-cran-ratelimitr r-cran-rbibutils r-cran-rcarb r-cran-rcmdcheck r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcpparmadillo r-cran-rcppcctz r-cran-rcppdate r-cran-rcppeigen r-cran-rcppgsl r-cran-rcpphnsw r-cran-rcppml r-cran-rcppparallel r-cran-rcppprogress r-cran-rcpproll r-cran-rcpptoml r-cran-rcsdp r-cran-rcurl r-cran-rdflib r-cran-rdpack r-cran-readr r-cran-readxl r-cran-recipes r-cran-redland r-cran-reformulas r-cran-registry r-cran-relimp r-cran-relsurv r-cran-rematch r-cran-rematch2 r-cran-remotes r-cran-rentrez r-cran-renv r-cran-repr r-cran-reprex r-cran-reshape r-cran-reshape2 r-cran-restfulr r-cran-reticulate r-cran-rex r-cran-rgenoud r-cran-rgl r-cran-rhandsontable r-cran-rhpcblasctl r-cran-rio r-cran-riskregression r-cran-ritis r-cran-rjags r-cran-rjava r-cran-rjson r-cran-rlang r-cran-rlrsim r-cran-rlumshiny r-cran-rmariadb r-cran-rmarkdown r-cran-rmpfr r-cran-rmpi r-cran-rms r-cran-rmysql r-cran-rncl r-cran-rnetcdf r-cran-rnexml r-cran-rngtools r-cran-robumeta r-cran-robust r-cran-robustbase r-cran-rocr r-cran-rose r-cran-rotl r-cran-roxygen2 r-cran-rpart r-cran-rpostgresql r-cran-rprojroot r-cran-rrcov r-cran-rredlist r-cran-rsample r-cran-rsconnect r-cran-rsolnp r-cran-rspectra r-cran-rsqlite r-cran-rstan r-cran-rstanarm r-cran-rstantools r-cran-rstatix r-cran-rstudioapi r-cran-rsvd r-cran-rsvg r-cran-rtdists r-cran-rtsne r-cran-runit r-cran-rversions r-cran-rvest r-cran-rwiener r-cran-s2 r-cran-s7 r-cran-samr r-cran-sandwich r-cran-sass r-cran-scales r-cran-scatterd3 r-cran-scattermore r-cran-scatterplot3d r-cran-sctransform r-cran-sdmtools r-cran-segmented r-cran-selectr r-cran-sendmailr r-cran-seqinr r-cran-seriation r-cran-sessioninfo r-cran-setrng r-cran-seurat r-cran-seuratobject r-cran-sf r-cran-sfsmisc r-cran-sftime r-cran-shape r-cran-shazam r-cran-shiny r-cran-shinybs r-cran-shinydashboard r-cran-shinyfiles r-cran-shinyjs r-cran-shinystan r-cran-shinythemes r-cran-sitmo r-cran-sjlabelled r-cran-sjstats r-cran-slam r-cran-slider r-cran-sm r-cran-smcfcs r-cran-sn r-cran-sna r-cran-snakecase r-cran-snow r-cran-sodium r-cran-solrium r-cran-sourcetools r-cran-sp r-cran-spacefillr r-cran-spacetime r-cran-spam r-cran-sparsem r-cran-sparsevctrs r-cran-spatial r-cran-spatialreg r-cran-spatstat r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random r-cran-spatstat.sparse r-cran-spatstat.univar r-cran-spatstat.utils r-cran-spdata r-cran-spdep r-cran-spelling r-cran-splines2 r-cran-spp r-cran-squarem r-cran-stabledist r-cran-stablelearner r-cran-stanheaders r-cran-stars r-cran-startupmsg r-cran-statmod r-cran-statnet.common r-cran-stringdist r-cran-stringi r-cran-stringr r-cran-strucchange r-cran-survey r-cran-survival r-cran-svglite r-cran-svunit r-cran-swagger r-cran-sys r-cran-systemfit r-cran-systemfonts r-cran-taxize r-cran-tcr r-cran-tensor r-cran-tensora r-cran-terra r-cran-testit r-cran-testthat r-cran-textshaping r-cran-tfisher r-cran-tfmpvalue r-cran-tgp r-cran-th.data r-cran-thematic r-cran-themis r-cran-threejs r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tidyverse r-cran-tiff r-cran-tigger r-cran-tikzdevice r-cran-timechange r-cran-timedate r-cran-timereg r-cran-timeseries r-cran-tinytest r-cran-tinytex r-cran-tmb r-cran-transformr r-cran-treespace r-cran-triebeard r-cran-truncdist r-cran-truncnorm r-cran-tseries r-cran-tsne r-cran-tsp r-cran-ttr r-cran-tufte r-cran-tweenr r-cran-tzdb r-cran-ucminf r-cran-unitizer r-cran-units r-cran-urca r-cran-urlchecker r-cran-urltools r-cran-uroot r-cran-usethis r-cran-utf8 r-cran-uuid r-cran-uwot r-cran-v8 r-cran-vcd r-cran-vcr r-cran-vctrs r-cran-vdiffr r-cran-vegan r-cran-venndiagram r-cran-vgam r-cran-vioplot r-cran-vipor r-cran-viridis r-cran-viridislite r-cran-visnetwork r-cran-vroom r-cran-waldo r-cran-warp r-cran-webfakes r-cran-webgestaltr r-cran-webmockr r-cran-webshot r-cran-webutils r-cran-wgcna r-cran-whisker r-cran-whoami r-cran-wikidataqueryservicer r-cran-wikidatar r-cran-wikipedir r-cran-wikitaxa r-cran-withr r-cran-wk r-cran-worrms r-cran-writexl r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xmlparsedata r-cran-xopen r-cran-xslt r-cran-xtable r-cran-xts r-cran-yaml r-cran-zeallot r-cran-zip r-cran-zoo r-doc-html r-mathlib r-other-ascat r-other-mott-happy.hbrem r-other-rajewsky-dropbead r-recommended racon radiant ragout rake rambo-k rampler rapmap rasmol raster3d rate4site raxml ray rdkit-data rdp-alignment rdp-classifier rdp-classifier-doc rdp-readseq readline-common readseq readucks reapr recan refmac-dictionary relion relion-gui repeatmasker-recon reprof resfinder resfinder-db rna-star rnahybrid roary rockhopper roguenarok rpcsvc-proto rsem rtax ruby ruby-did-you-mean ruby-minitest ruby-net-telnet ruby-power-assert ruby-rubygems ruby-sdbm ruby-test-unit ruby-webrick ruby-xmlrpc ruby3.3 rubygems-integration runcircos-gui saint salmid salmon sambamba samblaster samclip samtools savvy-util scala-library scoary scrappie scrm scythe seaview seer segemehl sensible-utils sepp seqan-apps seqan-needle seqan-raptor seqkit seqmagick seqprep seqsero seqtk sfftw2 sga sgml-base sgml-data shared-mime-info shasta shovill sibelia sibsim4 sickle sigma-align sim4 sim4db simka simkamin ska skesa skewer smalt smithwaterman smrtanalysis snakemake snap snap-aligner sniffles snippy snp-sites snpeff snpomatic snpsift soapaligner soapdenovo soapdenovo2 soapsnp sortmerna source-highlight spaced spades spaln spaln-data sphinx-common sphinx-rtd-theme-common spoa sprai spread-phy sq sqlite3 sra-toolkit srst2 ssake sse4.2-support ssl-cert sspace ssw-align stacks staden staden-common staden-io-lib-utils stringtie subread suitename sumaclust sumatra sumtrees surankco surpyvor survivor svim swarm sweed sysstat systemd systemd-cryptsetup systemd-sysv systemd-timesyncd t-coffee t1utils tabix tantan tasksel tasksel-data tcl tcl8.6 tcllib tcsh teckit terraphast tex-common tex-gyre texlive-base texlive-bibtex-extra texlive-binaries texlive-fonts-recommended texlive-lang-greek texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures texlive-plain-generic texlive-science texlive-xetex theseus thesias tiddit tigr-glimmer time timgm6mb-soundfont tipa tipp tk tk8.6 tk8.6-blt2.5 tklib tm-align tnseq-transit toil tombo tophat-recondition topp toppred tortoize trace2dbest tracetuner transdecoder transrate-tools transtermhp tree-puzzle tree-puzzle-doc treeview treeviewx trf trim-galore trimmomatic trinityrnaseq trinityrnaseq-examples ttf-bitstream-vera tvc twopaco tzdata-legacy uc-echo ucf udev ugene ugene-data umis uncalled unicode-data unicycler unicycler-data unikmer unixodbc-common unzip usb-modeswitch usb-modeswitch-data uuid-dev va-driver-all varna vcfanno vcftools vdpau-driver-all velvet velvetoptimiser veryfasttree vg vim vim-addon-manager vim-common vim-runtime virulencefinder vmatch vsearch vt w3c-sgml-lib wget wham-align wigeon wise wise-data wpasupplicant x11-common x11-utils x11-xserver-utils x11proto-dev xauth xdg-dbus-proxy xdg-desktop-portal xdg-desktop-portal-gtk xdg-user-dirs xdg-utils xfonts-encodings xfonts-utils xkb-data xml-core xorg-sgml-doctools xpore xsltproc xtrans-dev xxd xz-utils yaha yanagiba yanosim yelp yelp-xsl zenity zenity-common zip zlib1g-dev zutty Suggested packages: abacas-examples cron quota adun.app adwaita-icon-theme-legacy altree-examples ant-doc javacc junit jython libbcel-java libjdepend-java libjsch-java libxalan2-java apache2-doc apache2-suexec-pristine | apache2-suexec-custom ufw art-nextgen-simulation-tools-profiles aspell-doc spellutils avahi-autoipd beagle-doc binutils-doc gprofng-gui binutils-gold bio-eagle-examples trnascan-se libbio-tools-run-alignment-clustalw-perl python-black-doc blends-doc blt-demo bolt-lmm-doc bowtie-examples bowtie2-examples xfig bppsuite-examples cclib-data gnome-mime-data doc-base coot-doc cpp-doc gcc-14-locales cpp-14-doc podman | docker.io | singularity-container cwltool-doc cython-doc wordlist pinentry-gnome3 tor docbook docbook-defguide docbook-dsssl docbook-xsl debian-keyring meshlab embassy emboss-doc emboss-test liburi-encode-perl python3-mysqldb python3-mysql.connector fastlink-doc fastqtl-doc fonts-noto g++-multilib g++-14-multilib gcc-14-doc gamgi-data gamgi-doc garlic-doc openbabel gasic-examples gawk-doc gbrowse-data gbrowse-calign libfile-nfslock-perl gcc-multilib autoconf automake libtool flex bison gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu gdpc-examples gqview gedit-plugins gfortran-multilib gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev gettext-base git-doc git-email git-gui gitk gitweb git-cvs git-mediawiki git-svn gpg-wks-server parcimonie xloadimage gnuplot-doc scdaemon gsfonts graphviz-doc groff groovy-doc frei0r-plugins gvfs hmmer-doc hmmer2-doc hunspell libreoffice-writer openoffice.org-hunspell | openoffice.org-core i965-va-driver-shaders imagemagick-7-doc autotrace cups-bsd | lpr | lprng enscript ffmpeg gimp grads hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils transfig libraw-bin isoquery ivy-doc libbcpg-java libbcprov-java libjsch-agent-proxy-java javahelp2-doc kaptive-example krb5-doc libevent-perl libio-async-perl libpoe-perl lrzip alsa-utils libasound2-plugins libatinject-jsr330-api-java-doc libdigest-hmac-perl libgssapi-perl libcuda1 libnvcuvid1 libnvidia-encode1 libaxis-java-doc libxml-sax-expatxs-perl libbiojava6-java-doc liblapack-doc libbluray-bdj libboost-doc libboost1.83-doc libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev libboost-context1.83-dev libboost-contract1.83-dev libboost-coroutine1.83-dev libboost-date-time1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev libboost-numpy1.83-dev libboost-program-options1.83-dev libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev libboost-serialization1.83-dev libboost-stacktrace1.83-dev libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev bsh rhino libc-devtools glibc-doc libfont-freetype-perl libcastor-java-doc colord libcommons-collections3-java-doc libcommons-collections4-java-doc libcommons-digester-java libcommons-jxpath-java libcommons-vfs-java libgeronimo-jta-1.2-spec-java libcommons-httpclient-java-doc libcommons-lang-java-doc libavalon-framework-java libexcalibur-logkit-java libcommons-net-java-doc cups-common libcurl4-doc libidn-dev libscalar-properties-perl libnet-daemon-perl libsql-statement-perl libdistlib-java-doc libxpp2-java bzr libdv-bin oss-compat libdvdcss2 libenchant-2-voikko libfann-dev libfann-doc libfftw3-bin libfftw3-dev rng-tools libgd-tools gdbm-l10n geotiff-bin gdal-bin libgeotiff-epsg glew-utils low-memory-monitor libiodbc2-dev default-libmysqlclient-dev gmp-doc libgmp10-doc libmpfr-dev dns-root-data gnutls-doc libgoogle-gson-java-doc gpm gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-user libvisual-0.4-plugins gstreamer1.0-tools libhdf4-alt-dev hdf4-tools libhdf5-doc libheif-plugin-ffmpegdec libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e libheif-plugin-svtenc libhtml-element-extended-perl libhwloc-contrib-plugins libice-doc icu-doc libdb-file-lock-perl libfile-readbackwards-perl libisospec++-doc libbcpkix-java libxml-security-java jackd2 libjackson2-annotations-java-doc libjcommander-java-doc libjcsp-java-doc libjdom1-java-doc jetty9 libjfreesvg-java-doc libjide-oss-java-doc libjmol-java-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc fonts-ubuntu fonts-yanone-kaffeesatz texlive-fonts-extra libjsap-java-doc libjson-simple-doc libjsonp-java-doc libjsoup-java-doc libjsr305-java-doc liblcms2-utils libdbd-csv-perl liblog-dispatch-filerotate-perl librrds-perl liblog4j1.2-java-doc libcommons-csv-java libconversant-disruptor-java libdisruptor-java libgeronimo-jms-1.1-spec-java libjackson2-dataformat-xml-java libjackson2-dataformat-yaml libjctools-java libjeromq-java libjanino-java libtomcat9-java liblrdf0-dev libcrypt-ssleay-perl liblzma-doc inkscape libjna-java libjna-platform-java libmatthew-java-doc secrecy libmaven-file-management-java-doc libswt-gtk-4-java libencode-eucjpascii-perl libencode-hanextra-perl libpod2-base-perl default-mta | mail-transport-agent libmojolicious-perl libmmtf-java-doc libmpfi-doc libnanoxml2-java-doc ncurses-doc libnghttp2-doc libngs-java-doc notification-daemon avahi-autoipd | zeroconf libtss2-rc0t64 odbc-postgresql tdsodbc ogdi-bin libportaudio2 libsndio7.0 openms-doc opus-tools p11-kit-doc libscalar-number-perl pciutils pcscd pipewire libeclipse-jdt-core-java libplexus-utils2-java-doc pulseaudio libpwiz-doc qgnomeplatform-qt5 qt5-image-formats-plugins qt5-qmltooling-plugins qt6-qmltooling-plugins raptor2-utils rasqal-utils libraw1394-doc librdf-storage-mysql librdf-storage-postgresql librdf-storage-sqlite librdf-storage-virtuoso redland-utils readline-doc librsvg2-bin libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal libsasl2-modules-ldap libsasl2-modules-otp libsasl2-modules-sql lm-sensors serdi testng libsm-doc libsnpeff-java-doc libnet-jabber-perl sordi libtest-fatal-perl speex libssl-doc libstdc++-14-doc libswing-layout-java-doc libip4tc2 libpwquality1 libtbb-doc tre-agrep libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libwacom-bin gstreamer1.0-alsa libwildmagic5 libwildmidi-config libauthen-ntlm-perl libx11-doc libxcb-doc libxerces2-java-doc libxext-doc libxml-commons-resolver1.1-java-doc libunicode-map8-perl libunicode-string-perl xml-twig-tools libxmlgraphics-commons-java-doc libxom-java-doc libcglib-nodep-java libjdom2-java libjettison-java libjoda-time-java libkxml2-java libxt-doc libyaml-shell-perl loki-doc maffilter-examples make-doc apparmor massxpert2-doc graphmap mcl-doc acacia agat amos-assembler amoscmp annovar apollo arachne arb arvados asap axparafit axpcoords bagpipe bambus bax2bam bcbio biceps big-blast bigsdb bismark blat blimps-utils blobology braker btk-core cactus caftools card-rgi catfishq cdna-db cellprofiler cinema cluster3 cmap conda-package-handling condetri contrafold contralign copycat covpipe crossbow crux-toolkit cufflinks cytoscape dazzle deepbinner deepnano dendroscope diann dnapi e-hive ecell embassy-phylip emboss-explorer ensembl ensembl-vep estferret euler-sr euler2 exabayes exalt excavator ffp fieldbioinformatics figaro flappie forester forge galaxy gatk gbrowse-syn genemark genesplicer genetrack genezilla genographer gerp++ getdata glimmerhmm gmv gramalign graphbin graphmap2 haploview hawkeye htqc hts-nim-tools idefix idseq-bench illustrate inspect jbrowse jigsaw kempbasu lofreq mach-haplotyper mage2tab maker2 manta marginphase martj maude maxd medaka meme mesquite metabit metarep metastudent-data-2 migrate minimus mirbase modeller molekel mosaik-aligner mpsqed mrs msatfinder mugsy mummergpu mview nano-snakemake nanocall nanocomp nanoplot ncbi-magicblast nextsv ngila ngsqctoolkit nw-align oases obo-edit oligoarrayaux omegamap oncofuse operondb optitype paipline pangolin partigene partitionfinder patristic pcma pfaat phagefinder phpphylotree phylographer phylophlan phyloviz-core phylowin pigx-scrnaseq pipasic plato pomoxis profit profphd prot4est psipred pssh2 pufferfish purple pyrophosphate-tools python3-alignlib python3-anndata python3-intake python3-loompy python3-ncls python3-orange python3-pybel python3-pychopper python3-pyflow python3-pyranges python3-pyrle python3-tinyalign q2-alignment q2-composition q2-dada2 q2-deblur q2-diversity q2-emperor q2-fragment-insertion q2-gneiss q2-longitudinal q2-phylogeny q2-sample-classifier q2-vsearch q2cli qtlcart qtlreaper qualimap quast r-bioc-annotationhub r-bioc-bitseq r-bioc-experimenthub r-bioc-genomicfiles r-bioc-grohmm r-bioc-isoformswitchanalyzer r-bioc-mofa2 r-bioc-org.hs.eg.db r-bioc-org.mm.eg.db r-bioc-qusage r-bioc-structuralvariantannotation r-cran-biwt r-cran-boolnet r-cran-drinsight r-cran-minerva r-cran-optimalcutpoints r-cran-parmigene r-cran-qqman r-other-apmswapp r-other-fastbaps raxml-ng rbs-finder relion-cuda relion-gui-cuda repeatmasker roadtrips roche454ace2caf rosa rose rsat sailfish sap science-workflow seq-gen seq-seq-pan seqcluster seqwish sift signalalign sina sistr situs solvate sourmash sparta splitstree ssaha strap strap-base strelka tab2mage tacg tandem-genotypes taverna taxinspector tetra tide tigr-glimmer-mg tn-seqexplorer tophat treebuilder3d tripal twain ufasta umap unc-fish uniprime varmatch varscan vdjtools vienna-rna viewmol vmd x-tandem-pipeline zodiac-zeden melting-gui menu-l10n gridengine-client minexpert2-doc mira-doc mrbayes-doc mustang-testdata libxml2-utils npm openjdk-21-demo openjdk-21-source visualvm fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic libopenms2.6.0 topp keychain libpam-ssh monkeysphere ssh-askpass texlive-luatex pandoc-citeproc context wkhtmltopdf ghc php python libjs-katex citation-style-language-styles csh fish zsh parsinsert-testdata ed diffutils-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl debhelper perlprimer-doc phylip-doc pinentry-doc blast2 poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum probcons-extra profchop profcon metadisorder snapfun python3-doc python3-venv python-arrow-doc python-astropy-doc python3-astropy-affiliated python-attr-doc python-azure-doc python-biom-format-doc python3-gunicorn redis-server muscle3 python3-mmtf python3-psycopg2 python3-igraph python-blinker-doc python-bottleneck-doc python-charset-normalizer-doc python-configobj-doc python3-tornado python3-twisted python-coverage-doc python-cryptography-doc python3-cryptography-vectors python-cvxopt-doc cwl-utils python-cycler-doc python-python-deeptoolsintervals-doc python3-objgraph python3-trio python3-aioquic docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french python-elastic-transport-doc python-elasticsearch-doc python-fastjsonschema-doc python-flask-doc python-flufl.lock-doc python-gevent-doc python-git-doc python-greenlet-dev python-greenlet-doc python-h5py-doc python3-genshi python-hypothesis-doc python-invoke-doc python-ipython-doc python-ipywidgets-doc python-jinja2-doc python-joblib-doc python-jsonschema-doc python-jupyter-core-doc python3-pip python-jwt-doc python3-crypto python-lmfit-doc python-lxml-doc python-markdown-doc cm-super-minimal fonts-staypuft ipython3 python-matplotlib-doc python3-cairocffi python3-gobject python3-sip texlive-extra-utils python-mpmath-doc python3-gmpy2 python-nacl-doc python-natsort-doc python-numpy-doc libgle3 python-openpyxl-doc python-openssl-doc python3-pairtools-examples python-pandas-doc python3-gssapi python-patsy-doc python-pbcore-doc python-pdbx-doc python-periodictable-doc python-pexpect-doc python-pika-doc python-pil-doc python3-ipykernel python-ply-doc python-pomegranate-doc python-propka-doc python-prov-doc python-public-doc subversion python-pybedtools-doc python-pycares-doc python-pycurl-doc python-pygments-doc python-pygraphviz-doc python-pygtrie-doc python-pyinotify-doc python-pymongo-doc python-pyparsing-doc python-pytest-mock-doc python-rdflib-doc rdkit-doc python3-hiredis pdf-viewer python3-egenix-mxtexttools python-reportlab-doc rl-accel rl-renderpm python3-socks python-requests-doc python-rpy-docs python-scipy-doc python-setuptools-doc python-skbio-doc python3-dap python-sklearn-doc python3-stemmer python-sortedcontainers-doc fonts-freefont-otf latexmk node-mathjax-full python3-sphinx-rtd-theme sphinx-doc singularity-container python-sqlalchemy-doc python3-asyncpg python3-pg8000 python3-psycopg2cffi python3-aiosqlite python3-mariadb-connector python3-pyodbc python3-pymssql python3-cx-oracle python3-oracledb python-statsmodels-doc python-sympy-doc python3-netcdf4 python-tables-doc vitables python-tenacity-doc python3-fsspec tix python3-tk-dbg python-toolz-doc python-traitlets-doc python-uncertainties-doc python-werkzeug-doc wx3.2-doc python-yapsy-doc python-zstandard-doc python3.13-venv python3.13-doc qcat-examples qtltools-example elpa-ess r-doc-info | r-doc-pdf texinfo r-cran-princurve r-bioc-all r-bioc-golubesets r-bioc-shortread r-bioc-residualmatrix r-bioc-tximeta r-bioc-tximportdata r-bioc-ggbio r-bioc-scran r-bioc-edaseq r-bioc-ihw r-cran-survminer r-cran-upsetr r-bioc-densvis r-bioc-scrnaseq r-bioc-snpstats r-cran-waveslim r-cran-future.batchtools r-cran-mcmcpack r-cran-cubature r-bioc-complexheatmap r-cran-performanceanalytics r-cran-suppdists r-cran-calibrate r-cran-genetics r-cran-haplo.stats r-bioc-rgraphviz r-cran-wordcloud r-cran-rnaturalearth r-cran-matching r-cran-rglpk r-cran-rsymphony r-cran-tkrplot r-cran-rodbc r-cran-fdrtool r-cran-corpcor r-cran-logger r-cran-animation r-cran-gnm r-cran-sjmisc r-cran-sjplot r-cran-rlecuyer r-cran-sem r-cran-ggraph r-cran-tidygraph rasmol-doc raster3d-doc ri ruby-dev bundler ispcr mpi-defaults-bin sfftw-dev sgml-base-doc perlsgml w3-recs opensp sibelia-examples pbh5tools pbbarcode pbalign pbgenomicconsensus falcon slurm-client snakemake-doc genomics.cn-soapsnp sqlite3-doc ssake-examples staden-io-lib-examples isag systemd-container systemd-homed systemd-userdbd systemd-boot systemd-resolved systemd-repart libtss2-tcti-device0 t-coffee-examples tcl-tclreadline tcllib-critcl xpdf | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-fonts-recommended-doc texlive-latex-base-doc wp2latex icc-profiles texlive-latex-extra-doc texlive-latex-recommended-doc texlive-pstricks dot2tex prerex texlive-pictures-doc vprerex texlive-science-doc theseus-examples fluid-soundfont-gm tipa-doc podman | docker.io | singularity-container | docker-ce tophat2 transdecoder-doc treetool collectl umis-examples comgt wvdial nvidia-vdpau-driver nvidia-tesla-440-vdpau-driver nvidia-tesla-418-vdpau-driver nvidia-legacy-390xx-vdpau-driver nvidia-legacy-340xx-vdpau-driver velvet-example ctags vim-doc vim-scripts wise-doc wpagui libengine-pkcs11-openssl mesa-utils nickle cairo-5c xorg-docs-core accountsservice evince xdg-desktop-portal-gnome xpore-doc Recommended packages: libxml-parserl-perl r-cran-qvalue r-cran-tools blast2 anfo ffindex ghemical khmer muscle3 python3-bioxtasraw python3-cogent3 umap-learn profphd prover9 python3-numba q2cli stringtie-examples clark wevote The following NEW packages will be installed: abacas abpoa abyss acedb-other adapterremoval adduser adun-core adwaita-icon-theme aegean aevol aglfn alien-hunter alsa-topology-conf alsa-ucm-conf alter-sequence-alignment altree amap-align ampliconnoise andi ant ant-optional antlr antlr4 any2fasta apache2 apache2-bin apache2-data apache2-utils apbs apbs-data aragorn arden ariba art-nextgen-simulation-tools artemis artfastqgenerator aspell aspell-en assembly-stats assemblytics at-spi2-common at-spi2-core atac ataqv atropos augur augustus augustus-data autodock autodock-vina autogrid avahi-daemon avogadro avogadro-utils axe-demultiplexer baitfisher bali-phy ballview bamclipper bamkit bamtools bandage barrnap bash-completion bbmap bc bcalm bcftools beads beagle beast-mcmc beast2-mcmc bedops bedtools belvu berkeley-express bifrost binfmt-support binutils binutils-common binutils-x86-64-linux-gnu bio-eagle bio-rainbow bio-tradis bio-vcf bioawk biobambam2 bioperl bioperl-run biosquid biosyntax biosyntax-common biosyntax-gedit biosyntax-less biosyntax-vim bitseq black blasr blends-common blixem blt bolt-lmm bowtie bowtie2 boxshade bppphyview bppsuite brig bsdextrautils btllib-tools bubblewrap build-essential busco bustools bwa bzip2 bzip2-doc ca-certificates ca-certificates-java canu cassiopee cat-bat cclib cct cd-hit cdbfasta centrifuge cgview changeo chemical-mime-data chimeraslayer chromhmm chromimpute cif-tools circlator circos circos-tools clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx cnvkit codonw coinor-cbc coinor-libcbc3.1 coinor-libcgl1 coinor-libclp1 coinor-libcoinutils3v5 coinor-libosi1v5 comerr-dev comet-ms concavity conservation-code coot coot-data covtobed cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu crac csb ctffind curl cutadapt cutesv cwl-upgrader cwltool cython3 daligner damapper dascrubber datamash dawg dazzdb dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service deblur default-jdk default-jdk-headless default-jre default-jre-headless delly density-fitness dextractor dialign dialign-tx dialign-tx-data diamond-aligner dictionaries-common dirmngr discosnp disulfinder disulfinder-data dmidecode dmsetup dnaclust dnarrange docbook-xml docutils-common dotter dpkg-dev drop-seq-tools dssp dvipng dvisvgm dwgsim e-mem ea-utils ecopcr edtsurf eigensoft elph emacsen-common embassy-domainatrix embassy-domalign embassy-domsearch emboss emboss-data emboss-lib emmax enchant-2 estscan examl exonerate f2j fakeroot fasta3 fastahack fastani fastaq fastdnaml fastjar fastlink fastml fastp fastq-pair fastqc fastqtl fasttree figtree file filtlong fitgcp flash flexbar flye fml-asm 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soapaligner soapdenovo soapdenovo2 soapsnp sortmerna source-highlight spaced spades spaln spaln-data sphinx-common sphinx-rtd-theme-common spoa sprai spread-phy sq sqlite3 sra-toolkit srst2 ssake sse4.2-support ssl-cert sspace ssw-align stacks staden staden-common staden-io-lib-utils stringtie subread suitename sumaclust sumatra sumtrees surankco surpyvor survivor svim swarm sweed sysstat systemd systemd-cryptsetup systemd-sysv systemd-timesyncd t-coffee t1utils tabix tantan tasksel tasksel-data tcl tcl8.6 tcllib tcsh teckit terraphast tex-common tex-gyre texlive-base texlive-bibtex-extra texlive-binaries texlive-fonts-recommended texlive-lang-greek texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures texlive-plain-generic texlive-science texlive-xetex theseus thesias tiddit tigr-glimmer time timgm6mb-soundfont tipa tipp tk tk8.6 tk8.6-blt2.5 tklib tm-align tnseq-transit toil tombo tophat-recondition topp toppred tortoize trace2dbest tracetuner transdecoder transrate-tools transtermhp tree-puzzle tree-puzzle-doc treeview treeviewx trf trim-galore trimmomatic trinityrnaseq trinityrnaseq-examples ttf-bitstream-vera tvc twopaco tzdata-legacy uc-echo ucf udev ugene ugene-data umis uncalled unicode-data unicycler unicycler-data unikmer unixodbc-common unzip usb-modeswitch usb-modeswitch-data uuid-dev va-driver-all varna vcfanno vcftools vdpau-driver-all velvet velvetoptimiser veryfasttree vg vim vim-addon-manager vim-common vim-runtime virulencefinder vmatch vsearch vt w3c-sgml-lib wget wham-align wigeon wise wise-data wpasupplicant x11-common x11-utils x11-xserver-utils x11proto-dev xauth xdg-dbus-proxy xdg-desktop-portal xdg-desktop-portal-gtk xdg-user-dirs xdg-utils xfonts-encodings xfonts-utils xkb-data xml-core xorg-sgml-doctools xpore xsltproc xtrans-dev xxd xz-utils yaha yanagiba yanosim yelp yelp-xsl zenity zenity-common zip zlib1g-dev zutty 0 upgraded, 4076 newly installed, 0 to remove and 0 not upgraded. Need to get 5418 MB of archives. After this operation, 18.7 GB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libsystemd-shared amd64 257.4-3 [2141 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libapparmor1 amd64 4.1.0~beta5-5 [43.5 kB] Get:3 http://deb.debian.org/debian sid/main amd64 systemd amd64 257.4-3 [3094 kB] Get:4 http://deb.debian.org/debian sid/main amd64 systemd-sysv amd64 257.4-3 [61.9 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libdbus-1-3 amd64 1.16.2-2 [178 kB] Get:6 http://deb.debian.org/debian sid/main amd64 dbus-bin amd64 1.16.2-2 [80.0 kB] Get:7 http://deb.debian.org/debian sid/main amd64 dbus-session-bus-common all 1.16.2-2 [52.3 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.7.0-1 [107 kB] Get:9 http://deb.debian.org/debian sid/main amd64 dbus-daemon amd64 1.16.2-2 [159 kB] Get:10 http://deb.debian.org/debian sid/main amd64 adduser all 3.146 [178 kB] Get:11 http://deb.debian.org/debian sid/main amd64 dbus-system-bus-common all 1.16.2-2 [53.5 kB] Get:12 http://deb.debian.org/debian sid/main amd64 dbus amd64 1.16.2-2 [71.6 kB] Get:13 http://deb.debian.org/debian sid/main amd64 perl-modules-5.40 all 5.40.1-2 [3017 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libgdbm6t64 amd64 1.24-2 [75.2 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libgdbm-compat4t64 amd64 1.24-2 [50.3 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libperl5.40 amd64 5.40.1-2 [4315 kB] Get:17 http://deb.debian.org/debian sid/main amd64 perl amd64 5.40.1-2 [267 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libapr1t64 amd64 1.7.5-1 [104 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libaprutil1t64 amd64 1.6.3-3+b1 [89.4 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.46.1-2 [913 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libaprutil1-dbd-sqlite3 amd64 1.6.3-3+b1 [14.2 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libldap2 amd64 2.6.9+dfsg-2 [194 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libaprutil1-ldap amd64 1.6.3-3+b1 [12.3 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libcom-err2 amd64 1.47.2-1+b1 [24.3 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB] Get:30 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:31 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libidn2-0 amd64 2.3.8-2 [109 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB] Get:42 http://deb.debian.org/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libcurl4t64 amd64 8.13.0~rc2-1 [380 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Get:46 http://deb.debian.org/debian sid/main amd64 liblua5.4-0 amd64 5.4.7-1+b2 [147 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libicu76 amd64 76.1-3 [9721 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.3+b1 [699 kB] Get:49 http://deb.debian.org/debian sid/main amd64 apache2-bin amd64 2.4.63-1 [1399 kB] Get:50 http://deb.debian.org/debian sid/main amd64 apache2-data all 2.4.63-1 [160 kB] Get:51 http://deb.debian.org/debian sid/main amd64 apache2-utils amd64 2.4.63-1 [212 kB] Get:52 http://deb.debian.org/debian sid/main amd64 media-types all 13.0.0 [29.3 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.5+20250216-2 [135 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB] Get:55 http://deb.debian.org/debian sid/main amd64 procps amd64 2:4.0.4-7 [878 kB] Get:56 http://deb.debian.org/debian sid/main amd64 apache2 amd64 2.4.63-1 [219 kB] Get:57 http://deb.debian.org/debian sid/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:58 http://deb.debian.org/debian sid/main amd64 binfmt-support amd64 2.2.2-7 [64.3 kB] Get:59 http://deb.debian.org/debian sid/main amd64 fonts-lato all 2.015-1 [2780 kB] Get:60 http://deb.debian.org/debian sid/main amd64 libmpfr6 amd64 4.2.1-1+b2 [724 kB] Get:61 http://deb.debian.org/debian sid/main amd64 readline-common all 8.2-6 [69.4 kB] Get:62 http://deb.debian.org/debian sid/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get:63 http://deb.debian.org/debian sid/main amd64 libsigsegv2 amd64 2.14-1+b2 [34.4 kB] Get:64 http://deb.debian.org/debian sid/main amd64 gawk amd64 1:5.2.1-2+b1 [674 kB] Get:65 http://deb.debian.org/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-7+b1 [15.3 kB] Get:66 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 14.2.0-19 [137 kB] Get:67 http://deb.debian.org/debian sid/main amd64 libfftw3-double3 amd64 3.3.10-2+b1 [781 kB] Get:68 http://deb.debian.org/debian sid/main amd64 libpng16-16t64 amd64 1.6.47-1.1 [282 kB] Get:69 http://deb.debian.org/debian sid/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get:70 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:71 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:72 http://deb.debian.org/debian sid/main amd64 fonts-liberation all 1:2.1.5-3 [1475 kB] Get:73 http://deb.debian.org/debian sid/main amd64 fonts-freefont-ttf all 20211204+svn4273-2 [5318 kB] Get:74 http://deb.debian.org/debian sid/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB] Get:75 http://deb.debian.org/debian sid/main amd64 x11-common all 1:7.7+24 [217 kB] Get:76 http://deb.debian.org/debian sid/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get:77 http://deb.debian.org/debian sid/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get:78 http://deb.debian.org/debian sid/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get:79 http://deb.debian.org/debian sid/main amd64 fonts-texgyre all 20180621-6 [8211 kB] Get:80 http://deb.debian.org/debian sid/main amd64 fonts-noto-mono all 20201225-2 [398 kB] Get:81 http://deb.debian.org/debian sid/main amd64 fonts-noto-core all 20201225-2 [12.2 MB] Get:82 http://deb.debian.org/debian sid/main amd64 fontconfig-config amd64 2.15.0-2.2 [318 kB] Get:83 http://deb.debian.org/debian sid/main amd64 libfontconfig1 amd64 2.15.0-2.2 [391 kB] Get:84 http://deb.debian.org/debian sid/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Get:85 http://deb.debian.org/debian sid/main amd64 libdav1d7 amd64 1.5.1-1 [559 kB] Get:86 http://deb.debian.org/debian sid/main amd64 libheif-plugin-dav1d amd64 1.19.7-1 [11.7 kB] Get:87 http://deb.debian.org/debian sid/main amd64 libde265-0 amd64 1.0.15-1+b3 [189 kB] Get:88 http://deb.debian.org/debian sid/main amd64 libheif-plugin-libde265 amd64 1.19.7-1 [15.3 kB] Get:89 http://deb.debian.org/debian sid/main amd64 libheif1 amd64 1.19.7-1 [520 kB] Get:90 http://deb.debian.org/debian sid/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get:91 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo amd64 1:2.1.5-3.1 [168 kB] Get:92 http://deb.debian.org/debian sid/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get:93 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 14.2.0-19 [9308 B] Get:94 http://deb.debian.org/debian sid/main amd64 libglib2.0-0t64 amd64 2.84.0-2 [1513 kB] Get:95 http://deb.debian.org/debian sid/main amd64 liblqr-1-0 amd64 0.4.2-2.1+b2 [29.5 kB] Get:96 http://deb.debian.org/debian sid/main amd64 libltdl7 amd64 2.5.4-4 [416 kB] Get:97 http://deb.debian.org/debian sid/main amd64 libopenjp2-7 amd64 2.5.3-2 [204 kB] Get:98 http://deb.debian.org/debian sid/main amd64 libraw23t64 amd64 0.21.3-1+b1 [390 kB] Get:99 http://deb.debian.org/debian sid/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB] Get:100 http://deb.debian.org/debian sid/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get:101 http://deb.debian.org/debian sid/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Get:102 http://deb.debian.org/debian sid/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:103 http://deb.debian.org/debian sid/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Get:104 http://deb.debian.org/debian sid/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Get:105 http://deb.debian.org/debian sid/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get:106 http://deb.debian.org/debian sid/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get:107 http://deb.debian.org/debian sid/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get:108 http://deb.debian.org/debian sid/main amd64 libx11-data all 2:1.8.12-1 [343 kB] Get:109 http://deb.debian.org/debian sid/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB] Get:110 http://deb.debian.org/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get:111 http://deb.debian.org/debian sid/main amd64 imagemagick-7-common all 8:7.1.1.43+dfsg1-1 [67.4 kB] Get:112 http://deb.debian.org/debian sid/main amd64 libmagickcore-7.q16-10 amd64 8:7.1.1.43+dfsg1-1 [1843 kB] Get:113 http://deb.debian.org/debian sid/main amd64 libmagickwand-7.q16-10 amd64 8:7.1.1.43+dfsg1-1 [340 kB] Get:114 http://deb.debian.org/debian sid/main amd64 libmotif-common all 2.3.8-4 [34.8 kB] Get:115 http://deb.debian.org/debian sid/main amd64 shared-mime-info amd64 2.4-5+b2 [760 kB] Get:116 http://deb.debian.org/debian sid/main amd64 libdouble-conversion3 amd64 3.3.1-1 [41.8 kB] Get:117 http://deb.debian.org/debian sid/main amd64 libpcre2-16-0 amd64 10.45-1 [281 kB] Get:118 http://deb.debian.org/debian sid/main amd64 libqt5core5t64 amd64 5.15.15+dfsg-4+b1 [1869 kB] Get:119 http://deb.debian.org/debian sid/main amd64 libqt5script5 amd64 5.15.15+dfsg-2 [700 kB] Get:120 http://deb.debian.org/debian sid/main amd64 fontconfig amd64 2.15.0-2.2 [463 kB] Get:121 http://deb.debian.org/debian sid/main amd64 libdrm-common all 2.4.124-1 [8180 B] Get:122 http://deb.debian.org/debian sid/main amd64 libdrm2 amd64 2.4.124-1 [38.9 kB] Get:123 http://deb.debian.org/debian sid/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Get:124 http://deb.debian.org/debian sid/main amd64 libwayland-server0 amd64 1.23.1-3 [34.4 kB] Get:125 http://deb.debian.org/debian sid/main amd64 libdrm-amdgpu1 amd64 2.4.124-1 [22.4 kB] Get:126 http://deb.debian.org/debian sid/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB] Get:127 http://deb.debian.org/debian sid/main amd64 libdrm-intel1 amd64 2.4.124-1 [63.8 kB] Get:128 http://deb.debian.org/debian sid/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:129 http://deb.debian.org/debian sid/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB] Get:130 http://deb.debian.org/debian sid/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get:131 http://deb.debian.org/debian sid/main amd64 libllvm19 amd64 1:19.1.7-3 [26.0 MB] Get:132 http://deb.debian.org/debian sid/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get:133 http://deb.debian.org/debian sid/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB] Get:134 http://deb.debian.org/debian sid/main amd64 libx11-xcb1 amd64 2:1.8.12-1 [247 kB] Get:135 http://deb.debian.org/debian sid/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Get:136 http://deb.debian.org/debian sid/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Get:137 http://deb.debian.org/debian sid/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Get:138 http://deb.debian.org/debian sid/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Get:139 http://deb.debian.org/debian sid/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Get:140 http://deb.debian.org/debian sid/main amd64 libxshmfence1 amd64 1.3-1+b3 [8852 B] Get:141 http://deb.debian.org/debian sid/main amd64 mesa-libgallium amd64 25.0.2-1 [9624 kB] Get:142 http://deb.debian.org/debian sid/main amd64 libgbm1 amd64 25.0.2-1 [44.1 kB] Get:143 http://deb.debian.org/debian sid/main amd64 libwayland-client0 amd64 1.23.1-3 [26.8 kB] Get:144 http://deb.debian.org/debian sid/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get:145 http://deb.debian.org/debian sid/main amd64 libegl-mesa0 amd64 25.0.2-1 [128 kB] Get:146 http://deb.debian.org/debian sid/main amd64 libegl1 amd64 1.7.0-1+b2 [34.6 kB] Get:147 http://deb.debian.org/debian sid/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Get:148 http://deb.debian.org/debian sid/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b4 [19.3 kB] Get:149 http://deb.debian.org/debian sid/main amd64 libvulkan1 amd64 1.4.309.0-1 [130 kB] Get:150 http://deb.debian.org/debian sid/main amd64 libgl1-mesa-dri amd64 25.0.2-1 [45.6 kB] Get:151 http://deb.debian.org/debian sid/main amd64 libglx-mesa0 amd64 25.0.2-1 [142 kB] Get:152 http://deb.debian.org/debian sid/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Get:153 http://deb.debian.org/debian sid/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Get:154 http://deb.debian.org/debian sid/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get:155 http://deb.debian.org/debian sid/main amd64 libharfbuzz0b amd64 10.2.0-1+b1 [479 kB] Get:156 http://deb.debian.org/debian sid/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get:157 http://deb.debian.org/debian sid/main amd64 libevdev2 amd64 1.13.3+dfsg-1 [32.2 kB] Get:158 http://deb.debian.org/debian sid/main amd64 libmtdev1t64 amd64 1.1.7-1 [22.6 kB] Get:159 http://deb.debian.org/debian sid/main amd64 libgudev-1.0-0 amd64 238-6 [14.5 kB] Get:160 http://deb.debian.org/debian sid/main amd64 libwacom-common all 2.14.0-1 [103 kB] Get:161 http://deb.debian.org/debian sid/main amd64 libwacom9 amd64 2.14.0-1 [25.3 kB] Get:162 http://deb.debian.org/debian sid/main amd64 libinput-bin amd64 1.27.1-1 [26.0 kB] Get:163 http://deb.debian.org/debian sid/main amd64 libinput10 amd64 1.27.1-1 [135 kB] Get:164 http://deb.debian.org/debian sid/main amd64 libmd4c0 amd64 0.5.2-2+b1 [49.0 kB] Get:165 http://deb.debian.org/debian sid/main amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-4+b1 [218 kB] Get:166 http://deb.debian.org/debian sid/main amd64 libqt5network5t64 amd64 5.15.15+dfsg-4+b1 [682 kB] Get:167 http://deb.debian.org/debian sid/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get:168 http://deb.debian.org/debian sid/main amd64 libxcb-icccm4 amd64 0.4.2-1 [27.5 kB] Get:169 http://deb.debian.org/debian sid/main amd64 libxcb-util1 amd64 0.4.1-1 [23.5 kB] Get:170 http://deb.debian.org/debian sid/main amd64 libxcb-image0 amd64 0.4.0-2+b2 [22.2 kB] Get:171 http://deb.debian.org/debian sid/main amd64 libxcb-keysyms1 amd64 0.4.1-1 [16.7 kB] Get:172 http://deb.debian.org/debian sid/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get:173 http://deb.debian.org/debian sid/main amd64 libxcb-render-util0 amd64 0.3.10-1 [18.4 kB] Get:174 http://deb.debian.org/debian sid/main amd64 libxcb-shape0 amd64 1.17.0-2+b1 [106 kB] Get:175 http://deb.debian.org/debian sid/main amd64 libxcb-xinerama0 amd64 1.17.0-2+b1 [105 kB] Get:176 http://deb.debian.org/debian sid/main amd64 libxcb-xinput0 amd64 1.17.0-2+b1 [130 kB] Get:177 http://deb.debian.org/debian sid/main amd64 libxcb-xkb1 amd64 1.17.0-2+b1 [130 kB] Get:178 http://deb.debian.org/debian sid/main amd64 xkb-data all 2.42-1 [790 kB] Get:179 http://deb.debian.org/debian sid/main amd64 libxkbcommon0 amd64 1.7.0-2 [113 kB] Get:180 http://deb.debian.org/debian sid/main amd64 libxkbcommon-x11-0 amd64 1.7.0-2 [16.2 kB] Get:181 http://deb.debian.org/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1.1+b4 [27.8 kB] Get:182 http://deb.debian.org/debian sid/main amd64 libqt5gui5t64 amd64 5.15.15+dfsg-4+b1 [3496 kB] Get:183 http://deb.debian.org/debian sid/main amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-4+b1 [2396 kB] Get:184 http://deb.debian.org/debian sid/main amd64 libqt5scripttools5 amd64 5.15.15+dfsg-2 [215 kB] Get:185 http://deb.debian.org/debian sid/main amd64 libxft2 amd64 2.3.6-1+b4 [54.5 kB] Get:186 http://deb.debian.org/debian sid/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b2 [188 kB] Get:187 http://deb.debian.org/debian sid/main amd64 libxmu6 amd64 2:1.1.3-3+b4 [59.0 kB] Get:188 http://deb.debian.org/debian sid/main amd64 libxm4 amd64 2.3.8-4 [1049 kB] Get:189 http://deb.debian.org/debian sid/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-4.1+b2 [282 kB] Get:190 http://deb.debian.org/debian sid/main amd64 libboost-thread1.83.0 amd64 1.83.0-4.1+b2 [269 kB] Get:191 http://deb.debian.org/debian sid/main amd64 mira-assembler amd64 4.9.6-11 [2568 kB] Get:192 http://deb.debian.org/debian sid/main amd64 mira-rfam-12s-rrna all 4.9.6-11 [10.4 MB] Get:193 http://deb.debian.org/debian sid/main amd64 pigz amd64 2.8-1 [62.7 kB] Get:194 http://deb.debian.org/debian sid/main amd64 poppler-data all 0.4.12-1 [1601 kB] Get:195 http://deb.debian.org/debian sid/main amd64 libpython3.13-minimal amd64 3.13.2-2 [859 kB] Get:196 http://deb.debian.org/debian sid/main amd64 python3.13-minimal amd64 3.13.2-2 [2210 kB] Get:197 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.13.2-2 [27.1 kB] Get:198 http://deb.debian.org/debian sid/main amd64 netbase all 6.5 [12.4 kB] Get:199 http://deb.debian.org/debian sid/main amd64 libpython3.13-stdlib amd64 3.13.2-2 [1952 kB] Get:200 http://deb.debian.org/debian sid/main amd64 python3.13 amd64 3.13.2-2 [746 kB] Get:201 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.1 kB] Get:202 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.13.2-2 [28.1 kB] Get:203 http://deb.debian.org/debian sid/main amd64 python3-numpy-dev amd64 1:2.2.3+ds-5 [138 kB] Get:204 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.12.1-2 [160 kB] Get:205 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14.2.0-19 [836 kB] Get:206 http://deb.debian.org/debian sid/main amd64 libopenblas0-pthread amd64 0.3.29+ds-3 [6740 kB] Get:207 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.12.1-2 [2452 kB] Get:208 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:2.2.3+ds-5 [5084 kB] Get:209 http://deb.debian.org/debian sid/main amd64 sgml-base all 1.31 [15.4 kB] Get:210 http://deb.debian.org/debian sid/main amd64 isa-support amd64 26 [15.0 kB] Get:211 http://deb.debian.org/debian sid/main amd64 sse4.2-support amd64 26 [3492 B] Get:212 http://deb.debian.org/debian sid/main amd64 tasksel-data all 3.79 [18.0 kB] Get:213 http://deb.debian.org/debian sid/main amd64 tasksel all 3.79 [51.5 kB] Get:214 http://deb.debian.org/debian sid/main amd64 dmidecode amd64 3.6-2 [69.0 kB] Get:215 http://deb.debian.org/debian sid/main amd64 libbpf1 amd64 1:1.5.0-2 [169 kB] Get:216 http://deb.debian.org/debian sid/main amd64 libmnl0 amd64 1.0.5-3 [11.9 kB] Get:217 http://deb.debian.org/debian sid/main amd64 libtirpc-common all 1.3.6+ds-1 [11.0 kB] Get:218 http://deb.debian.org/debian sid/main amd64 libtirpc3t64 amd64 1.3.6+ds-1 [83.3 kB] Get:219 http://deb.debian.org/debian sid/main amd64 libxtables12 amd64 1.8.11-2 [31.9 kB] Get:220 http://deb.debian.org/debian sid/main amd64 libcap2-bin amd64 1:2.75-3 [36.7 kB] Get:221 http://deb.debian.org/debian sid/main amd64 iproute2 amd64 6.13.0-1 [1087 kB] Get:222 http://deb.debian.org/debian sid/main amd64 less amd64 643-1 [148 kB] Get:223 http://deb.debian.org/debian sid/main amd64 linux-sysctl-defaults all 4.11 [5244 B] Get:224 http://deb.debian.org/debian sid/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:225 http://deb.debian.org/debian sid/main amd64 libkmod2 amd64 34.1-2 [63.0 kB] Get:226 http://deb.debian.org/debian sid/main amd64 udev amd64 257.4-3 [1361 kB] Get:227 http://deb.debian.org/debian sid/main amd64 vim-common all 2:9.1.1113-1 [420 kB] Get:228 http://deb.debian.org/debian sid/main amd64 bash-completion all 1:2.16.0-7 [319 kB] Get:229 http://deb.debian.org/debian sid/main amd64 bzip2 amd64 1.0.8-6 [40.5 kB] Get:230 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.4.1-1 [1427 kB] Get:231 http://deb.debian.org/debian sid/main amd64 ca-certificates all 20241223 [164 kB] Get:232 http://deb.debian.org/debian sid/main amd64 libmagic-mgc amd64 1:5.46-3 [337 kB] Get:233 http://deb.debian.org/debian sid/main amd64 libmagic1t64 amd64 1:5.46-3 [109 kB] Get:234 http://deb.debian.org/debian sid/main amd64 file amd64 1:5.46-3 [43.5 kB] Get:235 http://deb.debian.org/debian sid/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:236 http://deb.debian.org/debian sid/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get:237 http://deb.debian.org/debian sid/main amd64 krb5-locales all 1.21.3-5 [101 kB] Get:238 http://deb.debian.org/debian sid/main amd64 libnss-systemd amd64 257.4-3 [216 kB] Get:239 http://deb.debian.org/debian sid/main amd64 libpam-systemd amd64 257.4-3 [294 kB] Get:240 http://deb.debian.org/debian sid/main amd64 bsdextrautils amd64 2.40.4-5 [92.4 kB] Get:241 http://deb.debian.org/debian sid/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:242 http://deb.debian.org/debian sid/main amd64 manpages all 6.9.1-1 [1393 kB] Get:243 http://deb.debian.org/debian sid/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get:244 http://deb.debian.org/debian sid/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get:245 http://deb.debian.org/debian sid/main amd64 openssh-client amd64 1:9.9p2-2 [968 kB] Get:246 http://deb.debian.org/debian sid/main amd64 systemd-timesyncd amd64 257.4-3 [90.3 kB] Get:247 http://deb.debian.org/debian sid/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B] Get:248 http://deb.debian.org/debian sid/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:249 http://deb.debian.org/debian sid/main amd64 ucf all 3.0050 [42.7 kB] Get:250 http://deb.debian.org/debian sid/main amd64 wget amd64 1.25.0-2 [984 kB] Get:251 http://deb.debian.org/debian sid/main amd64 xz-utils amd64 5.6.4-1 [554 kB] Get:252 http://deb.debian.org/debian sid/main amd64 mummer amd64 3.23+dfsg-8 [662 kB] Get:253 http://deb.debian.org/debian sid/main amd64 abacas all 1.3.1-9 [24.6 kB] Get:254 http://deb.debian.org/debian sid/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get:255 http://deb.debian.org/debian sid/main amd64 libcdt5 amd64 2.42.4-3 [40.3 kB] Get:256 http://deb.debian.org/debian sid/main amd64 libcgraph6 amd64 2.42.4-3 [64.0 kB] Get:257 http://deb.debian.org/debian sid/main amd64 libaom3 amd64 3.12.0-1 [1870 kB] Get:258 http://deb.debian.org/debian sid/main amd64 libabsl20240722 amd64 20240722.0-1.5 [492 kB] Get:259 http://deb.debian.org/debian sid/main amd64 libgav1-1 amd64 0.19.0-3+b1 [353 kB] Get:260 http://deb.debian.org/debian sid/main amd64 librav1e0.7 amd64 0.7.1-9+b1 [946 kB] Get:261 http://deb.debian.org/debian sid/main amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2489 kB] Get:262 http://deb.debian.org/debian sid/main amd64 libyuv0 amd64 0.0.1904.20250204-1 [174 kB] Get:263 http://deb.debian.org/debian sid/main amd64 libavif16 amd64 1.2.1-1 [133 kB] Get:264 http://deb.debian.org/debian sid/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get:265 http://deb.debian.org/debian sid/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get:266 http://deb.debian.org/debian sid/main amd64 libraqm0 amd64 0.10.2-1 [13.9 kB] Get:267 http://deb.debian.org/debian sid/main amd64 libxpm4 amd64 1:3.5.17-1+b3 [56.2 kB] Get:268 http://deb.debian.org/debian sid/main amd64 libgd3 amd64 2.3.3-12+b1 [126 kB] Get:269 http://deb.debian.org/debian sid/main amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2+b1 [160 kB] Get:270 http://deb.debian.org/debian sid/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get:271 http://deb.debian.org/debian sid/main amd64 libcairo2 amd64 1.18.4-1+b1 [538 kB] Get:272 http://deb.debian.org/debian sid/main amd64 libthai-data all 0.1.29-2 [168 kB] Get:273 http://deb.debian.org/debian sid/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get:274 http://deb.debian.org/debian sid/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get:275 http://deb.debian.org/debian sid/main amd64 libpango-1.0-0 amd64 1.56.3-1 [226 kB] Get:276 http://deb.debian.org/debian sid/main amd64 libpangoft2-1.0-0 amd64 1.56.3-1 [55.6 kB] Get:277 http://deb.debian.org/debian sid/main amd64 libpangocairo-1.0-0 amd64 1.56.3-1 [35.7 kB] Get:278 http://deb.debian.org/debian sid/main amd64 libpathplan4 amd64 2.42.4-3 [42.6 kB] Get:279 http://deb.debian.org/debian sid/main amd64 libgvc6 amd64 2.42.4-3 [686 kB] Get:280 http://deb.debian.org/debian sid/main amd64 libgvpr2 amd64 2.42.4-3 [192 kB] Get:281 http://deb.debian.org/debian sid/main amd64 liblab-gamut1 amd64 2.42.4-3 [198 kB] Get:282 http://deb.debian.org/debian sid/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB] Get:283 http://deb.debian.org/debian sid/main amd64 graphviz amd64 2.42.4-3 [621 kB] Get:284 http://deb.debian.org/debian sid/main amd64 abpoa amd64 1.5.3-1+b3 [297 kB] Get:285 http://deb.debian.org/debian sid/main amd64 make amd64 4.4.1-1 [463 kB] Get:286 http://deb.debian.org/debian sid/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get:287 http://deb.debian.org/debian sid/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get:288 http://deb.debian.org/debian sid/main amd64 libnl-3-200 amd64 3.7.0-2 [59.4 kB] Get:289 http://deb.debian.org/debian sid/main amd64 libnl-route-3-200 amd64 3.7.0-2 [182 kB] Get:290 http://deb.debian.org/debian sid/main amd64 libibverbs1 amd64 56.0-3 [62.4 kB] Get:291 http://deb.debian.org/debian sid/main amd64 ibverbs-providers amd64 56.0-3 [357 kB] Get:292 http://deb.debian.org/debian sid/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get:293 http://deb.debian.org/debian sid/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get:294 http://deb.debian.org/debian sid/main amd64 librdmacm1t64 amd64 56.0-3 [70.1 kB] Get:295 http://deb.debian.org/debian sid/main amd64 libfabric1 amd64 2.0.0-4 [700 kB] Get:296 http://deb.debian.org/debian sid/main amd64 libhwloc15 amd64 2.12.0-1 [164 kB] Get:297 http://deb.debian.org/debian sid/main amd64 libmunge2 amd64 0.5.16-1 [19.7 kB] Get:298 http://deb.debian.org/debian sid/main amd64 libxnvctrl0 amd64 535.171.04-1+b2 [14.2 kB] Get:299 http://deb.debian.org/debian sid/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get:300 http://deb.debian.org/debian sid/main amd64 libhwloc-plugins amd64 2.12.0-1 [18.1 kB] Get:301 http://deb.debian.org/debian sid/main amd64 libpmix2t64 amd64 5.0.6-5 [651 kB] Get:302 http://deb.debian.org/debian sid/main amd64 libllvm17t64 amd64 1:17.0.6-21+b1 [23.6 MB] Get:303 http://deb.debian.org/debian sid/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get:304 http://deb.debian.org/debian sid/main amd64 libhsakmt1 amd64 6.2.4+ds-1 [61.1 kB] Get:305 http://deb.debian.org/debian sid/main amd64 libhsa-runtime64-1 amd64 6.1.2-3 [535 kB] Get:306 http://deb.debian.org/debian sid/main amd64 libamdhip64-5 amd64 5.7.1-5+b1 [8882 kB] Get:307 http://deb.debian.org/debian sid/main amd64 libfuse3-4 amd64 3.17.1~rc1-3 [97.5 kB] Get:308 http://deb.debian.org/debian sid/main amd64 libibumad3 amd64 56.0-3 [29.9 kB] Get:309 http://deb.debian.org/debian sid/main amd64 libibmad5 amd64 56.0-3 [44.4 kB] Get:310 http://deb.debian.org/debian sid/main amd64 libucx0 amd64 1.18.1+ds-2+b1 [1196 kB] Get:311 http://deb.debian.org/debian sid/main amd64 libopenmpi40 amd64 5.0.7-1 [2365 kB] Get:312 http://deb.debian.org/debian sid/main amd64 openmpi-common all 5.0.7-1 [97.2 kB] Get:313 http://deb.debian.org/debian sid/main amd64 openmpi-bin amd64 5.0.7-1 [189 kB] Get:314 http://deb.debian.org/debian sid/main amd64 abyss amd64 2.3.10-1+b1 [3324 kB] Get:315 http://deb.debian.org/debian sid/main amd64 acedb-other amd64 4.9.39+dfsg.02-9 [16.7 kB] Get:316 http://deb.debian.org/debian sid/main amd64 adapterremoval amd64 2.3.4-1 [205 kB] Get:317 http://deb.debian.org/debian sid/main amd64 gnustep-common amd64 2.9.3-6 [122 kB] Get:318 http://deb.debian.org/debian sid/main amd64 gnustep-multiarch amd64 2.9.3-6 [88.5 kB] Get:319 http://deb.debian.org/debian sid/main amd64 tzdata-legacy all 2025a-2 [178 kB] Get:320 http://deb.debian.org/debian sid/main amd64 gnustep-base-common all 1.31.1-2 [337 kB] Get:321 http://deb.debian.org/debian sid/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get:322 http://deb.debian.org/debian sid/main amd64 libunbound8 amd64 1.22.0-1+b1 [598 kB] Get:323 http://deb.debian.org/debian sid/main amd64 libgnutls-dane0t64 amd64 3.8.9-2 [455 kB] Get:324 http://deb.debian.org/debian sid/main amd64 gnutls-bin amd64 3.8.9-2 [691 kB] Get:325 http://deb.debian.org/debian sid/main amd64 libavahi-common-data amd64 0.8-16 [112 kB] Get:326 http://deb.debian.org/debian sid/main amd64 libavahi-common3 amd64 0.8-16 [44.2 kB] Get:327 http://deb.debian.org/debian sid/main amd64 libavahi-client3 amd64 0.8-16 [48.4 kB] Get:328 http://deb.debian.org/debian sid/main amd64 libgc1 amd64 1:8.2.8-1 [247 kB] Get:329 http://deb.debian.org/debian sid/main amd64 libobjc4 amd64 14.2.0-19 [43.3 kB] Get:330 http://deb.debian.org/debian sid/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB] Get:331 http://deb.debian.org/debian sid/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB] Get:332 http://deb.debian.org/debian sid/main amd64 libxslt1.1 amd64 1.1.35-1.2 [233 kB] Get:333 http://deb.debian.org/debian sid/main amd64 libgnustep-base1.31 amd64 1.31.1-2 [1671 kB] Get:334 http://deb.debian.org/debian sid/main amd64 gnustep-base-runtime amd64 1.31.1-2 [465 kB] Get:335 http://deb.debian.org/debian sid/main amd64 libgslcblas0 amd64 2.8+dfsg-5 [116 kB] Get:336 http://deb.debian.org/debian sid/main amd64 libgsl28 amd64 2.8+dfsg-5 [994 kB] Get:337 http://deb.debian.org/debian sid/main amd64 adun-core amd64 0.81-15+b1 [760 kB] Get:338 http://deb.debian.org/debian sid/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-2 [311 kB] Get:339 http://deb.debian.org/debian sid/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-2 [140 kB] Get:340 http://deb.debian.org/debian sid/main amd64 gtk-update-icon-cache amd64 4.18.2+ds-1 [51.6 kB] Get:341 http://deb.debian.org/debian sid/main amd64 hicolor-icon-theme all 0.18-2 [11.8 kB] Get:342 http://deb.debian.org/debian sid/main amd64 adwaita-icon-theme all 48.0-1 [504 kB] Get:343 http://deb.debian.org/debian sid/main amd64 liblua5.1-0 amd64 5.1.5-11 [109 kB] Get:344 http://deb.debian.org/debian sid/main amd64 libtre5 amd64 0.9.0-1 [50.0 kB] Get:345 http://deb.debian.org/debian sid/main amd64 lua-md5 amd64 1.2+git+1+8d87fee-2+b2 [13.7 kB] Get:346 http://deb.debian.org/debian sid/main amd64 genometools-common all 1.6.5+ds-2.2 [195 kB] Get:347 http://deb.debian.org/debian sid/main amd64 libgenometools0t64 amd64 1.6.5+ds-2.2 [1420 kB] Get:348 http://deb.debian.org/debian sid/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:349 http://deb.debian.org/debian sid/main amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [144 kB] Get:350 http://deb.debian.org/debian sid/main amd64 libjs-mootools all 1.4.5~debian1-3 [179 kB] Get:351 http://deb.debian.org/debian sid/main amd64 aegean amd64 0.16.0+dfsg-4 [217 kB] Get:352 http://deb.debian.org/debian sid/main amd64 aevol amd64 5.0+ds-4 [566 kB] Get:353 http://deb.debian.org/debian sid/main amd64 aglfn all 1.7+git20191031.4036a9c-2 [30.5 kB] Get:354 http://deb.debian.org/debian sid/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get:355 http://deb.debian.org/debian sid/main amd64 java-common all 0.76 [6776 B] Get:356 http://deb.debian.org/debian sid/main amd64 libnspr4 amd64 2:4.36-1 [110 kB] Get:357 http://deb.debian.org/debian sid/main amd64 libnss3 amd64 2:3.109-1 [1393 kB] Get:358 http://deb.debian.org/debian sid/main amd64 libpcsclite1 amd64 2.3.1-1 [56.0 kB] Get:359 http://deb.debian.org/debian sid/main amd64 openjdk-21-jre-headless amd64 21.0.7~7ea-1 [41.8 MB] Get:360 http://deb.debian.org/debian sid/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get:361 http://deb.debian.org/debian sid/main amd64 at-spi2-common all 2.56.0-3 [171 kB] Get:362 http://deb.debian.org/debian sid/main amd64 libatk1.0-0t64 amd64 2.56.0-3 [52.0 kB] Get:363 http://deb.debian.org/debian sid/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get:364 http://deb.debian.org/debian sid/main amd64 libatspi2.0-0t64 amd64 2.56.0-3 [80.6 kB] Get:365 http://deb.debian.org/debian sid/main amd64 libatk-bridge2.0-0t64 amd64 2.56.0-3 [67.9 kB] Get:366 http://deb.debian.org/debian sid/main amd64 libcairo-gobject2 amd64 1.18.4-1+b1 [130 kB] Get:367 http://deb.debian.org/debian sid/main amd64 libcloudproviders0 amd64 0.3.6-1+b1 [29.2 kB] Get:368 http://deb.debian.org/debian sid/main amd64 libcolord2 amd64 1.4.7-3 [139 kB] Get:369 http://deb.debian.org/debian sid/main amd64 libcups2t64 amd64 2.4.10-2+b1 [251 kB] Get:370 http://deb.debian.org/debian sid/main amd64 libepoxy0 amd64 1.5.10-2 [193 kB] Get:371 http://deb.debian.org/debian sid/main amd64 libwayland-cursor0 amd64 1.23.1-3 [11.9 kB] Get:372 http://deb.debian.org/debian sid/main amd64 libwayland-egl1 amd64 1.23.1-3 [5860 B] Get:373 http://deb.debian.org/debian sid/main amd64 libxcomposite1 amd64 1:0.4.6-1 [16.3 kB] Get:374 http://deb.debian.org/debian sid/main amd64 libxfixes3 amd64 1:6.0.0-2+b4 [20.2 kB] Get:375 http://deb.debian.org/debian sid/main amd64 libxcursor1 amd64 1:1.2.3-1 [39.7 kB] Get:376 http://deb.debian.org/debian sid/main amd64 libxdamage1 amd64 1:1.1.6-1+b2 [15.5 kB] Get:377 http://deb.debian.org/debian sid/main amd64 libxinerama1 amd64 2:1.1.4-3+b3 [16.0 kB] Get:378 http://deb.debian.org/debian sid/main amd64 libxrandr2 amd64 2:1.5.4-1+b3 [36.3 kB] Get:379 http://deb.debian.org/debian sid/main amd64 dbus-user-session amd64 1.16.2-2 [52.1 kB] Get:380 http://deb.debian.org/debian sid/main amd64 libdconf1 amd64 0.40.0-5 [41.8 kB] Get:381 http://deb.debian.org/debian sid/main amd64 dconf-service amd64 0.40.0-5 [32.4 kB] Get:382 http://deb.debian.org/debian sid/main amd64 dconf-gsettings-backend amd64 0.40.0-5 [28.6 kB] Get:383 http://deb.debian.org/debian sid/main amd64 libgtk-3-common all 3.24.49-2 [4905 kB] Get:384 http://deb.debian.org/debian sid/main amd64 libgtk-3-0t64 amd64 3.24.49-2 [2769 kB] Get:385 http://deb.debian.org/debian sid/main amd64 libasound2-data all 1.2.13-1 [21.1 kB] Get:386 http://deb.debian.org/debian sid/main amd64 libasound2t64 amd64 1.2.13-1+b1 [373 kB] Get:387 http://deb.debian.org/debian sid/main amd64 libgif7 amd64 5.2.2-1+b1 [44.2 kB] Get:388 http://deb.debian.org/debian sid/main amd64 libxtst6 amd64 2:1.2.5-1 [25.8 kB] Get:389 http://deb.debian.org/debian sid/main amd64 openjdk-21-jre amd64 21.0.7~7ea-1 [205 kB] Get:390 http://deb.debian.org/debian sid/main amd64 default-jre amd64 2:1.21-76 [1068 B] Get:391 http://deb.debian.org/debian sid/main amd64 libbytecode-java all 0.92.svn.20090106-3 [90.2 kB] Get:392 http://deb.debian.org/debian sid/main amd64 libcommons-pool-java all 1.6-5 [109 kB] Get:393 http://deb.debian.org/debian sid/main amd64 libcommons-dbcp-java all 1.4-8 [157 kB] Get:394 http://deb.debian.org/debian sid/main amd64 libatinject-jsr330-api-java all 1.0+ds1-6 [5112 B] Get:395 http://deb.debian.org/debian sid/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB] Get:396 http://deb.debian.org/debian sid/main amd64 libjsr305-java all 0.1~+svn49-12 [26.6 kB] Get:397 http://deb.debian.org/debian sid/main amd64 libguava-java all 32.0.1-1 [2708 kB] Get:398 http://deb.debian.org/debian sid/main amd64 libjgraph-java all 5.12.4.2+dfsg-7 [207 kB] Get:399 http://deb.debian.org/debian sid/main amd64 libjgrapht0.8-java all 0.8.3-7 [216 kB] Get:400 http://deb.debian.org/debian sid/main amd64 libbiojava1.9-java all 1:1.9.7+dfsg-2 [3164 kB] Get:401 http://deb.debian.org/debian sid/main amd64 libbiojava-java all 1:1.9.7+dfsg-2 [5552 B] Get:402 http://deb.debian.org/debian sid/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB] Get:403 http://deb.debian.org/debian sid/main amd64 libcommons-collections3-java all 3.2.2-3 [530 kB] Get:404 http://deb.debian.org/debian sid/main amd64 alien-hunter all 1.7-10 [28.5 kB] Get:405 http://deb.debian.org/debian sid/main amd64 alsa-topology-conf all 1.2.5.1-3 [15.3 kB] Get:406 http://deb.debian.org/debian sid/main amd64 alsa-ucm-conf all 1.2.13-2 [77.8 kB] Get:407 http://deb.debian.org/debian sid/main amd64 alter-sequence-alignment all 1.3.4-8 [1108 kB] Get:408 http://deb.debian.org/debian sid/main amd64 libtamuanova-0.2 amd64 0.2-5+b3 [9228 B] Get:409 http://deb.debian.org/debian sid/main amd64 libmath-tamuanova-perl amd64 1.0.2-4+b2 [13.9 kB] Get:410 http://deb.debian.org/debian sid/main amd64 altree amd64 1.3.2-2+b4 [346 kB] Get:411 http://deb.debian.org/debian sid/main amd64 amap-align amd64 2.2+git20080214.600fc29+dfsg-2 [132 kB] Get:412 http://deb.debian.org/debian sid/main amd64 mafft amd64 7.505-1 [1078 kB] Get:413 http://deb.debian.org/debian sid/main amd64 ampliconnoise amd64 1.29-15+b1 [1111 kB] Get:414 http://deb.debian.org/debian sid/main amd64 libdivsufsort3 amd64 2.0.1-6+b1 [45.9 kB] Get:415 http://deb.debian.org/debian sid/main amd64 andi amd64 0.14-3+b1 [472 kB] Get:416 http://deb.debian.org/debian sid/main amd64 ant all 1.10.15-1 [2163 kB] Get:417 http://deb.debian.org/debian sid/main amd64 ant-optional all 1.10.15-1 [456 kB] Get:418 http://deb.debian.org/debian sid/main amd64 libantlr-java all 2.7.7+dfsg-14 [458 kB] Get:419 http://deb.debian.org/debian sid/main amd64 antlr all 2.7.7+dfsg-14 [8376 B] Get:420 http://deb.debian.org/debian sid/main amd64 libantlr4-runtime-java all 4.9.2-3 [318 kB] Get:421 http://deb.debian.org/debian sid/main amd64 libantlr3-runtime-java all 3.5.3-2 [165 kB] Get:422 http://deb.debian.org/debian sid/main amd64 libicu4j-java all 73.2-1 [16.4 MB] Get:423 http://deb.debian.org/debian sid/main amd64 libjsonp-java all 1.1.2-4 [127 kB] Get:424 http://deb.debian.org/debian sid/main amd64 libstringtemplate4-java all 4.3.3-1 [247 kB] Get:425 http://deb.debian.org/debian sid/main amd64 libtreelayout-java all 1.0.3-2 [27.0 kB] Get:426 http://deb.debian.org/debian sid/main amd64 antlr4 all 4.9.2-3 [1399 kB] Get:427 http://deb.debian.org/debian sid/main amd64 any2fasta all 0.4.2-2 [6232 B] Get:428 http://deb.debian.org/debian sid/main amd64 apbs-data all 3.4.1-6 [1489 kB] Get:429 http://deb.debian.org/debian sid/main amd64 libmaloc1 amd64 1.5-2+b3 [84.5 kB] Get:430 http://deb.debian.org/debian sid/main amd64 libsuperlu7 amd64 7.0.0+dfsg1-2 [174 kB] Get:431 http://deb.debian.org/debian sid/main amd64 libsuitesparseconfig7 amd64 1:7.10.1+dfsg-1 [32.3 kB] Get:432 http://deb.debian.org/debian sid/main amd64 libamd3 amd64 1:7.10.1+dfsg-1 [49.2 kB] Get:433 http://deb.debian.org/debian sid/main amd64 libcamd3 amd64 1:7.10.1+dfsg-1 [45.9 kB] Get:434 http://deb.debian.org/debian sid/main amd64 libccolamd3 amd64 1:7.10.1+dfsg-1 [47.7 kB] Get:435 http://deb.debian.org/debian sid/main amd64 libcolamd3 amd64 1:7.10.1+dfsg-1 [41.0 kB] Get:436 http://deb.debian.org/debian sid/main amd64 libcholmod5 amd64 1:7.10.1+dfsg-1 [648 kB] Get:437 http://deb.debian.org/debian sid/main amd64 libumfpack6 amd64 1:7.10.1+dfsg-1 [288 kB] Get:438 http://deb.debian.org/debian sid/main amd64 libfetk1.9t64 amd64 3.4.1-6+b3 [570 kB] Get:439 http://deb.debian.org/debian sid/main amd64 libapbs3t64 amd64 3.4.1-6+b3 [260 kB] Get:440 http://deb.debian.org/debian sid/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get:441 http://deb.debian.org/debian sid/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get:442 http://deb.debian.org/debian sid/main amd64 libarpack2t64 amd64 3.9.1-4 [104 kB] Get:443 http://deb.debian.org/debian sid/main amd64 libspqr4 amd64 1:7.10.1+dfsg-1 [155 kB] Get:444 http://deb.debian.org/debian sid/main amd64 apbs amd64 3.4.1-6+b3 [79.3 kB] Get:445 http://deb.debian.org/debian sid/main amd64 aragorn amd64 1.2.41-3 [88.0 kB] Get:446 http://deb.debian.org/debian sid/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get:447 http://deb.debian.org/debian sid/main amd64 python3-scipy amd64 1.15.2-6 [16.3 MB] Get:448 http://deb.debian.org/debian sid/main amd64 libngtcp2-16 amd64 1.11.0-1 [131 kB] Get:449 http://deb.debian.org/debian sid/main amd64 libngtcp2-crypto-gnutls8 amd64 1.11.0-1 [29.3 kB] Get:450 http://deb.debian.org/debian sid/main amd64 libcurl3t64-gnutls amd64 8.13.0~rc2-1 [373 kB] Get:451 http://deb.debian.org/debian sid/main amd64 libhtscodecs2 amd64 1.6.1-2 [95.8 kB] Get:452 http://deb.debian.org/debian sid/main amd64 libhts3t64 amd64 1.21+ds-1 [463 kB] Get:453 http://deb.debian.org/debian sid/main amd64 python3-pysam amd64 0.23.0+ds-1+b1 [3665 kB] Get:454 http://deb.debian.org/debian sid/main amd64 python3-htseq amd64 2.0.9+dfsg-1+b2 [321 kB] Get:455 http://deb.debian.org/debian sid/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:456 http://deb.debian.org/debian sid/main amd64 fonts-lyx all 2.4.3-1 [190 kB] Get:457 http://deb.debian.org/debian sid/main amd64 python-matplotlib-data all 3.8.3-7 [2735 kB] Get:458 http://deb.debian.org/debian sid/main amd64 python3-dateutil all 2.9.0-4 [79.4 kB] Get:459 http://deb.debian.org/debian sid/main amd64 python3-pil amd64 11.1.0-5+b1 [513 kB] Get:460 http://deb.debian.org/debian sid/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1042 kB] Get:461 http://deb.debian.org/debian sid/main amd64 libxss1 amd64 1:1.2.3-1+b3 [17.0 kB] Get:462 http://deb.debian.org/debian sid/main amd64 libtk8.6 amd64 8.6.16-1 [793 kB] Get:463 http://deb.debian.org/debian sid/main amd64 python3.13-tk amd64 3.13.2-2 [107 kB] Get:464 http://deb.debian.org/debian sid/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-8 [591 kB] Get:465 http://deb.debian.org/debian sid/main amd64 blt amd64 2.5.3+dfsg-8 [5984 B] Get:466 http://deb.debian.org/debian sid/main amd64 python3-tk amd64 3.13.2-1 [9516 B] Get:467 http://deb.debian.org/debian sid/main amd64 python3-pil.imagetk amd64 11.1.0-5+b1 [81.6 kB] Get:468 http://deb.debian.org/debian sid/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get:469 http://deb.debian.org/debian sid/main amd64 python3-contourpy amd64 1.3.1-1+b1 [216 kB] Get:470 http://deb.debian.org/debian sid/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get:471 http://deb.debian.org/debian sid/main amd64 python3-brotli amd64 1.1.0-2+b7 [320 kB] Get:472 http://deb.debian.org/debian sid/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get:473 http://deb.debian.org/debian sid/main amd64 python3-fs all 2.4.16-7 [95.2 kB] Get:474 http://deb.debian.org/debian sid/main amd64 python3-lxml amd64 5.3.1-1+b1 [1288 kB] Get:475 http://deb.debian.org/debian sid/main amd64 python3-lz4 amd64 4.4.0+dfsg-1+b1 [25.5 kB] Get:476 http://deb.debian.org/debian sid/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get:477 http://deb.debian.org/debian sid/main amd64 python3-sympy all 1.13.3-5 [4148 kB] Get:478 http://deb.debian.org/debian sid/main amd64 python3-attr all 25.1.0-1 [68.7 kB] Get:479 http://deb.debian.org/debian sid/main amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB] Get:480 http://deb.debian.org/debian sid/main amd64 python3-unicodedata2 amd64 15.1.0+ds-1+b4 [299 kB] Get:481 http://deb.debian.org/debian sid/main amd64 python3-all amd64 3.13.2-2 [1044 B] Get:482 http://deb.debian.org/debian sid/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get:483 http://deb.debian.org/debian sid/main amd64 python3-fonttools amd64 4.55.3-2+b1 [1448 kB] Get:484 http://deb.debian.org/debian sid/main amd64 python3-kiwisolver amd64 1.4.7-3+b1 [62.0 kB] Get:485 http://deb.debian.org/debian sid/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get:486 http://deb.debian.org/debian sid/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get:487 http://deb.debian.org/debian sid/main amd64 python3-matplotlib amd64 3.8.3-7+b1 [23.0 MB] Get:488 http://deb.debian.org/debian sid/main amd64 arden all 1.0-6 [90.1 kB] Get:489 http://deb.debian.org/debian sid/main amd64 libncurses6 amd64 6.5+20250216-2 [105 kB] Get:490 http://deb.debian.org/debian sid/main amd64 samtools amd64 1.21-1 [667 kB] Get:491 http://deb.debian.org/debian sid/main amd64 fastaq all 3.17.0-9 [47.8 kB] Get:492 http://deb.debian.org/debian sid/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get:493 http://deb.debian.org/debian sid/main amd64 python3-cairo amd64 1.27.0-2 [114 kB] Get:494 http://deb.debian.org/debian sid/main amd64 python3-freetype all 2.5.1-1 [89.3 kB] Get:495 http://deb.debian.org/debian sid/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B] Get:496 http://deb.debian.org/debian sid/main amd64 python3-reportlab all 4.3.1-1 [1158 kB] Get:497 http://deb.debian.org/debian sid/main amd64 xml-core all 0.19 [20.1 kB] Get:498 http://deb.debian.org/debian sid/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get:499 http://deb.debian.org/debian sid/main amd64 python3-biopython amd64 1.85+dfsg-2+b1 [1672 kB] Get:500 http://deb.debian.org/debian sid/main amd64 python3-soupsieve all 2.6-1 [38.3 kB] Get:501 http://deb.debian.org/debian sid/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get:502 http://deb.debian.org/debian sid/main amd64 python3-bs4 all 4.13.3-2 [166 kB] Get:503 http://deb.debian.org/debian sid/main amd64 python3-dendropy all 4.6.1-2 [277 kB] Get:504 http://deb.debian.org/debian sid/main amd64 python3-pymummer all 0.11.0-5 [18.1 kB] Get:505 http://deb.debian.org/debian sid/main amd64 libfml0 amd64 0.1+git20221215.85f159e-1 [70.1 kB] Get:506 http://deb.debian.org/debian sid/main amd64 libminimap0 amd64 0.2-8+b3 [22.7 kB] Get:507 http://deb.debian.org/debian sid/main amd64 bowtie2 amd64 2.5.4-1+b1 [1508 kB] Get:508 http://deb.debian.org/debian sid/main amd64 cd-hit amd64 4.8.1-4 [522 kB] Get:509 http://deb.debian.org/debian sid/main amd64 libcapnp-1.1.0 amd64 1.1.0-2 [1479 kB] Get:510 http://deb.debian.org/debian sid/main amd64 libmurmurhash2 amd64 1.6-1+b1 [6180 B] Get:511 http://deb.debian.org/debian sid/main amd64 mash amd64 2.3+dfsg-6+b2 [192 kB] Get:512 http://deb.debian.org/debian sid/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get:513 http://deb.debian.org/debian sid/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB] Get:514 http://deb.debian.org/debian sid/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get:515 http://deb.debian.org/debian sid/main amd64 python3-importlib-metadata all 8.6.1-1 [21.4 kB] Get:516 http://deb.debian.org/debian sid/main amd64 python3-typeguard all 4.4.2-1 [37.3 kB] Get:517 http://deb.debian.org/debian sid/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get:518 http://deb.debian.org/debian sid/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:519 http://deb.debian.org/debian sid/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get:520 http://deb.debian.org/debian sid/main amd64 python3-setuptools all 75.8.0-1 [724 kB] Get:521 http://deb.debian.org/debian sid/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Get:522 http://deb.debian.org/debian sid/main amd64 python3-pkg-resources all 75.8.0-1 [222 kB] Get:523 http://deb.debian.org/debian sid/main amd64 ariba amd64 2.14.7+ds-7 [1958 kB] Get:524 http://deb.debian.org/debian sid/main amd64 art-nextgen-simulation-tools amd64 20160605+dfsg-5+b1 [1689 kB] Get:525 http://deb.debian.org/debian sid/main amd64 unzip amd64 6.0-29 [173 kB] Get:526 http://deb.debian.org/debian sid/main amd64 java-wrappers all 0.5 [8848 B] Get:527 http://deb.debian.org/debian sid/main amd64 libjaxp1.3-java all 1.3.05-6 [227 kB] Get:528 http://deb.debian.org/debian sid/main amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] Get:529 http://deb.debian.org/debian sid/main amd64 libapache-pom-java all 33-2 [5852 B] Get:530 http://deb.debian.org/debian sid/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:531 http://deb.debian.org/debian sid/main amd64 libcommons-io-java all 2.18.0-1 [509 kB] Get:532 http://deb.debian.org/debian sid/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get:533 http://deb.debian.org/debian sid/main amd64 libxmlgraphics-commons-java all 2.10-2 [628 kB] Get:534 http://deb.debian.org/debian sid/main amd64 librhino-java all 1.7.15-1 [1382 kB] Get:535 http://deb.debian.org/debian sid/main amd64 libbatik-java all 1.18+dfsg-2 [3940 kB] Get:536 http://deb.debian.org/debian sid/main amd64 libasm-java all 9.7.1-1 [391 kB] Get:537 http://deb.debian.org/debian sid/main amd64 libcglib-java all 3.3.0-1 [288 kB] Get:538 http://deb.debian.org/debian sid/main amd64 libibatis-java all 2.3.4.726-7 [343 kB] Get:539 http://deb.debian.org/debian sid/main amd64 libj2ssh-java all 0.2.9-6 [739 kB] Get:540 http://deb.debian.org/debian sid/main amd64 libhpdf-2.3.0 amd64 2.3.0+dfsg-1+b3 [343 kB] Get:541 http://deb.debian.org/debian sid/main amd64 mysql-common all 5.8+1.1.1 [6784 B] Get:542 http://deb.debian.org/debian sid/main amd64 mariadb-common all 1:11.8.1-2 [28.9 kB] Get:543 http://deb.debian.org/debian sid/main amd64 libmariadb3 amd64 1:11.8.1-2 [187 kB] Get:544 http://deb.debian.org/debian sid/main amd64 libpq5 amd64 17.4-1+b1 [226 kB] Get:545 http://deb.debian.org/debian sid/main amd64 emboss-lib amd64 6.6.0+dfsg-15 [2874 kB] Get:546 http://deb.debian.org/debian sid/main amd64 emboss-data all 6.6.0+dfsg-15 [61.1 MB] Get:547 http://deb.debian.org/debian sid/main amd64 emboss amd64 6.6.0+dfsg-15 [1072 kB] Get:548 http://deb.debian.org/debian sid/main amd64 jemboss all 6.6.0+dfsg-15 [3824 kB] Get:549 http://deb.debian.org/debian sid/main amd64 libcommons-lang3-java all 3.17.0-1 [641 kB] Get:550 http://deb.debian.org/debian sid/main amd64 libcommons-net-java all 3.9.0-1 [294 kB] Get:551 http://deb.debian.org/debian sid/main amd64 libcommons-codec-java all 1.18.0-1 [304 kB] Get:552 http://deb.debian.org/debian sid/main amd64 libcommons-compress-java all 1.27.1-2 [641 kB] Get:553 http://deb.debian.org/debian sid/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get:554 http://deb.debian.org/debian sid/main amd64 libhamcrest-java all 2.2-2 [121 kB] Get:555 http://deb.debian.org/debian sid/main amd64 junit4 all 4.13.2-5 [350 kB] Get:556 http://deb.debian.org/debian sid/main amd64 libcommons-beanutils-java all 1.9.4-2 [233 kB] Get:557 http://deb.debian.org/debian sid/main amd64 libcommons-collections4-java all 4.4-2 [682 kB] Get:558 http://deb.debian.org/debian sid/main amd64 libezmorph-java all 1.0.6-4 [75.9 kB] Get:559 http://deb.debian.org/debian sid/main amd64 libslf4j-java all 1.7.32-1 [144 kB] Get:560 http://deb.debian.org/debian sid/main amd64 libjaxen-java all 1.1.6-5 [214 kB] Get:561 http://deb.debian.org/debian sid/main amd64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB] Get:562 http://deb.debian.org/debian sid/main amd64 libxerces2-java all 2.12.2-1 [1440 kB] Get:563 http://deb.debian.org/debian sid/main amd64 libxom-java all 1.3.9-1 [174 kB] Get:564 http://deb.debian.org/debian sid/main amd64 libjson-java all 3.1.0+dfsg-2 [142 kB] Get:565 http://deb.debian.org/debian sid/main amd64 libmbedcrypto16 amd64 3.6.2-3 [355 kB] Get:566 http://deb.debian.org/debian sid/main amd64 libmbedx509-7 amd64 3.6.2-3 [147 kB] Get:567 http://deb.debian.org/debian sid/main amd64 libmbedtls21 amd64 3.6.2-3 [234 kB] Get:568 http://deb.debian.org/debian sid/main amd64 ncbi-vdb-data all 3.0.9+dfsg-2 [74.0 kB] Get:569 http://deb.debian.org/debian sid/main amd64 libncbi-vdb3 amd64 3.0.9+dfsg-2 [1189 kB] Get:570 http://deb.debian.org/debian sid/main amd64 libncbi-ngs3 amd64 3.0.9+dfsg-7.1 [156 kB] Get:571 http://deb.debian.org/debian sid/main amd64 libngs-jni amd64 3.0.9+dfsg-7.1 [25.6 kB] Get:572 http://deb.debian.org/debian sid/main amd64 libngs-java amd64 3.0.9+dfsg-7.1 [112 kB] Get:573 http://deb.debian.org/debian sid/main amd64 libsnappy1v5 amd64 1.2.1-1+b1 [29.6 kB] Get:574 http://deb.debian.org/debian sid/main amd64 libsnappy-jni amd64 1.1.10.7-1 [6492 B] Get:575 http://deb.debian.org/debian sid/main amd64 libsnappy-java all 1.1.10.7-1 [87.6 kB] Get:576 http://deb.debian.org/debian sid/main amd64 libhtsjdk-java all 4.1.3+dfsg-2 [1841 kB] Get:577 http://deb.debian.org/debian sid/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get:578 http://deb.debian.org/debian sid/main amd64 libfreemarker-java all 2.3.32-2 [1546 kB] Get:579 http://deb.debian.org/debian sid/main amd64 libgoogle-gson-java all 2.10.1-1 [262 kB] Get:580 http://deb.debian.org/debian sid/main amd64 libjoptsimple-java all 5.0.4-7 [73.7 kB] Get:581 http://deb.debian.org/debian sid/main amd64 libhttpcore-java all 4.4.16-1 [636 kB] Get:582 http://deb.debian.org/debian sid/main amd64 libhttpclient-java all 4.5.14-1 [1247 kB] Get:583 http://deb.debian.org/debian sid/main amd64 liblightcouch-java all 0.2.0-1 [75.0 kB] Get:584 http://deb.debian.org/debian sid/main amd64 libmongodb-java all 3.6.3-2 [1901 kB] Get:585 http://deb.debian.org/debian sid/main amd64 liblog4j2-java all 2.19.0-2 [2310 kB] Get:586 http://deb.debian.org/debian sid/main amd64 libbarclay-java all 5.0.0+dfsg-1 [108 kB] Get:587 http://deb.debian.org/debian sid/main amd64 libgatk-native-bindings-java all 1.0.0+dfsg-2 [8024 B] Get:588 http://deb.debian.org/debian sid/main amd64 libgkl-java all 0.8.11+dfsg-2 [24.7 kB] Get:589 http://deb.debian.org/debian sid/main amd64 libcommons-math3-java all 3.6.1-4 [2040 kB] Get:590 http://deb.debian.org/debian sid/main amd64 libpicard-java all 3.3.0+dfsg-2 [1778 kB] Get:591 http://deb.debian.org/debian sid/main amd64 libpostgresql-jdbc-java all 42.7.5-1 [1017 kB] Get:592 http://deb.debian.org/debian sid/main amd64 artemis all 18.2.0+dfsg-4 [3799 kB] Get:593 http://deb.debian.org/debian sid/main amd64 artfastqgenerator all 0.0.20150519-5 [41.1 kB] Get:594 http://deb.debian.org/debian sid/main amd64 libaspell15 amd64 0.60.8.1-4 [338 kB] Get:595 http://deb.debian.org/debian sid/main amd64 libtext-iconv-perl amd64 1.7-8+b4 [14.4 kB] Get:596 http://deb.debian.org/debian sid/main amd64 emacsen-common all 3.0.7 [12.7 kB] Get:597 http://deb.debian.org/debian sid/main amd64 dictionaries-common all 1.30.10 [174 kB] Get:598 http://deb.debian.org/debian sid/main amd64 aspell amd64 0.60.8.1-4 [275 kB] Get:599 http://deb.debian.org/debian sid/main amd64 aspell-en all 2020.12.07-0-1 [306 kB] Get:600 http://deb.debian.org/debian sid/main amd64 assembly-stats amd64 1.0.1+ds-6 [22.3 kB] Get:601 http://deb.debian.org/debian sid/main amd64 zip amd64 3.0-14 [233 kB] Get:602 http://deb.debian.org/debian sid/main amd64 libpaper2 amd64 2.2.5-0.3+b1 [16.6 kB] Get:603 http://deb.debian.org/debian sid/main amd64 libpaper-utils amd64 2.2.5-0.3+b1 [16.4 kB] Get:604 http://deb.debian.org/debian sid/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] Get:605 http://deb.debian.org/debian sid/main amd64 r-base-core amd64 4.4.3-1+b1 [28.3 MB] Get:606 http://deb.debian.org/debian sid/main amd64 r-cran-cli amd64 3.6.4-1 [1370 kB] Get:607 http://deb.debian.org/debian sid/main amd64 r-cran-glue amd64 1.8.0-1 [165 kB] Get:608 http://deb.debian.org/debian sid/main amd64 r-cran-rlang amd64 1.1.5-1 [1712 kB] Get:609 http://deb.debian.org/debian sid/main amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] Get:610 http://deb.debian.org/debian sid/main amd64 r-cran-gtable all 0.3.6+dfsg-1 [228 kB] Get:611 http://deb.debian.org/debian sid/main amd64 r-cran-isoband amd64 0.2.7-1 [1614 kB] Get:612 http://deb.debian.org/debian sid/main amd64 r-cran-mass amd64 7.3-65-1 [1113 kB] Get:613 http://deb.debian.org/debian sid/main amd64 r-cran-lattice amd64 0.22-6-1 [1392 kB] Get:614 http://deb.debian.org/debian sid/main amd64 r-cran-nlme amd64 3.1.167-1 [2331 kB] Get:615 http://deb.debian.org/debian sid/main amd64 r-cran-matrix amd64 1.7-3-1 [4048 kB] Get:616 http://deb.debian.org/debian sid/main amd64 r-cran-mgcv amd64 1.9-1-1 [3233 kB] Get:617 http://deb.debian.org/debian sid/main amd64 r-cran-farver amd64 2.1.2-1 [1411 kB] Get:618 http://deb.debian.org/debian sid/main amd64 r-cran-labeling all 0.4.3-1 [62.4 kB] Get:619 http://deb.debian.org/debian sid/main amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1716 kB] Get:620 http://deb.debian.org/debian sid/main amd64 r-cran-munsell all 0.5.1-1 [237 kB] Get:621 http://deb.debian.org/debian sid/main amd64 r-cran-r6 all 2.6.1-1 [106 kB] Get:622 http://deb.debian.org/debian sid/main amd64 r-cran-rcolorbrewer all 1.1-3-1 [54.7 kB] Get:623 http://deb.debian.org/debian sid/main amd64 r-cran-viridislite all 0.4.2-2 [1299 kB] Get:624 http://deb.debian.org/debian sid/main amd64 r-cran-scales all 1.3.0-1 [677 kB] Get:625 http://deb.debian.org/debian sid/main amd64 r-cran-fansi amd64 1.0.6-1 [629 kB] Get:626 http://deb.debian.org/debian sid/main amd64 r-cran-magrittr amd64 2.0.3-1 [201 kB] Get:627 http://deb.debian.org/debian sid/main amd64 r-cran-utf8 amd64 1.2.4-1 [133 kB] Get:628 http://deb.debian.org/debian sid/main amd64 r-cran-vctrs amd64 0.6.5-1 [1375 kB] Get:629 http://deb.debian.org/debian sid/main amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] Get:630 http://deb.debian.org/debian sid/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get:631 http://deb.debian.org/debian sid/main amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [425 kB] Get:632 http://deb.debian.org/debian sid/main amd64 r-cran-withr all 3.0.2+dfsg-1 [226 kB] Get:633 http://deb.debian.org/debian sid/main amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3933 kB] Get:634 http://deb.debian.org/debian sid/main amd64 r-cran-littler amd64 0.3.20-2 [103 kB] Get:635 http://deb.debian.org/debian sid/main amd64 littler all 0.3.20-2 [16.0 kB] Get:636 http://deb.debian.org/debian sid/main amd64 r-cran-pkgkitten all 0.2.4-1 [29.1 kB] Get:637 http://deb.debian.org/debian sid/main amd64 r-cran-rcpp amd64 1.0.14-1 [2080 kB] Get:638 http://deb.debian.org/debian sid/main amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] Get:639 http://deb.debian.org/debian sid/main amd64 assemblytics all 1.2.1+dfsg-2 [18.6 kB] Get:640 http://deb.debian.org/debian sid/main amd64 gsettings-desktop-schemas all 48.0-1 [700 kB] Get:641 http://deb.debian.org/debian sid/main amd64 at-spi2-core amd64 2.56.0-3 [62.1 kB] Get:642 http://deb.debian.org/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:643 http://deb.debian.org/debian sid/main amd64 leaff amd64 0~20150903+r2013-9+b1 [70.7 kB] Get:644 http://deb.debian.org/debian sid/main amd64 meryl amd64 0~20150903+r2013-9+b1 [200 kB] Get:645 http://deb.debian.org/debian sid/main amd64 gnuplot-data all 6.0.2+dfsg1-1 [72.4 kB] Get:646 http://deb.debian.org/debian sid/main amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-4+b1 [206 kB] Get:647 http://deb.debian.org/debian sid/main amd64 libqt5svg5 amd64 5.15.15-2 [138 kB] Get:648 http://deb.debian.org/debian sid/main amd64 libpcre2-32-0 amd64 10.45-1 [268 kB] Get:649 http://deb.debian.org/debian sid/main amd64 libwxbase3.2-1t64 amd64 3.2.6+dfsg-2 [1041 kB] Get:650 http://deb.debian.org/debian sid/main amd64 libnotify4 amd64 0.8.4-1 [26.3 kB] Get:651 http://deb.debian.org/debian sid/main amd64 libwxgtk3.2-1t64 amd64 3.2.6+dfsg-2 [4695 kB] Get:652 http://deb.debian.org/debian sid/main amd64 gnuplot-qt amd64 6.0.2+dfsg1-1 [1155 kB] Get:653 http://deb.debian.org/debian sid/main amd64 gnuplot all 6.0.2+dfsg1-1 [5888 B] Get:654 http://deb.debian.org/debian sid/main amd64 atac amd64 0~20150903+r2013-9+b1 [388 kB] Get:655 http://deb.debian.org/debian sid/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-4.1+b2 [240 kB] Get:656 http://deb.debian.org/debian sid/main amd64 libboost-iostreams1.83.0 amd64 1.83.0-4.1+b2 [254 kB] Get:657 http://deb.debian.org/debian sid/main amd64 libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] Get:658 http://deb.debian.org/debian sid/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get:659 http://deb.debian.org/debian sid/main amd64 node-normalize.css all 8.0.1-5 [12.7 kB] Get:660 http://deb.debian.org/debian sid/main amd64 node-d3-array all 3.2.0+~cs5.0.6-2 [44.1 kB] Get:661 http://deb.debian.org/debian sid/main amd64 node-d3-axis all 1.0.12+~1.0.16-1 [13.7 kB] Get:662 http://deb.debian.org/debian sid/main amd64 node-d3-dispatch all 1.0.6+~1.0.9-1 [9560 B] Get:663 http://deb.debian.org/debian sid/main amd64 node-d3-selection all 1.4.1+~1.4.3-1 [42.1 kB] Get:664 http://deb.debian.org/debian sid/main amd64 node-d3-drag all 1.2.5+~1.2.5-1 [18.7 kB] Get:665 http://deb.debian.org/debian sid/main amd64 node-d3-color all 1.4.1+~1.4.2-1 [19.1 kB] Get:666 http://deb.debian.org/debian sid/main amd64 node-d3-interpolate all 1.4.0+~1.4.2-1 [23.3 kB] Get:667 http://deb.debian.org/debian sid/main amd64 node-d3-ease all 1.0.7+~1.0.11-1 [12.2 kB] Get:668 http://deb.debian.org/debian sid/main amd64 node-d3-timer all 1.0.10+~1.0.10-1 [10.3 kB] Get:669 http://deb.debian.org/debian sid/main amd64 node-d3-transition all 1.3.2+~1.3.2-1 [28.2 kB] Get:670 http://deb.debian.org/debian sid/main amd64 node-d3-brush all 1.1.6+~1.1.5-1 [185 kB] Get:671 http://deb.debian.org/debian sid/main amd64 node-d3-path all 1.0.9+~1.0.9-1 [10.2 kB] Get:672 http://deb.debian.org/debian sid/main amd64 node-d3-chord all 1.0.6+~1.0.11-1 [13.9 kB] Get:673 http://deb.debian.org/debian sid/main amd64 node-d3-collection all 1.0.7+~1.0.10-1 [16.9 kB] Get:674 http://deb.debian.org/debian sid/main amd64 node-d3-contour all 1.3.2+~1.3.3-1 [17.2 kB] Get:675 http://deb.debian.org/debian sid/main amd64 node-safe-buffer all 5.2.1+~cs2.1.2-3 [15.5 kB] Get:676 http://deb.debian.org/debian sid/main amd64 node-iconv-lite all 0.6.3-3 [115 kB] Get:677 http://deb.debian.org/debian sid/main amd64 node-d3-queue all 3.0.7-13 [10.2 kB] Get:678 http://deb.debian.org/debian sid/main amd64 node-rw all 1.3.3-5 [7428 B] Get:679 http://deb.debian.org/debian sid/main amd64 node-commander all 9.4.1-1 [65.3 kB] Get:680 http://deb.debian.org/debian sid/main amd64 node-d3-dsv all 1.2.0+~1.2.3-1 [17.4 kB] Get:681 http://deb.debian.org/debian sid/main amd64 node-d3-fetch all 1.2.0+~1.2.2-1 [9844 B] Get:682 http://deb.debian.org/debian sid/main amd64 node-d3-quadtree all 1.0.7+~1.0.9-1 [16.0 kB] Get:683 http://deb.debian.org/debian sid/main amd64 node-d3-force all 2.1.1+~2.1.4-1 [30.2 kB] Get:684 http://deb.debian.org/debian sid/main amd64 libjs-d3-format all 1:1.4.5+~1.4.2-2 [17.7 kB] Get:685 http://deb.debian.org/debian sid/main amd64 node-d3-format all 1:1.4.5+~1.4.2-2 [12.6 kB] Get:686 http://deb.debian.org/debian sid/main amd64 node-d3-geo all 1.12.1+~1.12.4-1 [65.5 kB] Get:687 http://deb.debian.org/debian sid/main amd64 node-d3-hierarchy all 1.1.9+~1.1.8-1 [34.1 kB] Get:688 http://deb.debian.org/debian sid/main amd64 node-d3-polygon all 1.0.6+~1.0.8-1 [8580 B] Get:689 http://deb.debian.org/debian sid/main amd64 node-d3-random all 1.1.2+~1.1.3-1 [8908 B] Get:690 http://deb.debian.org/debian sid/main amd64 node-d3-time all 1.1.0+~1.1.1-1 [18.7 kB] Get:691 http://deb.debian.org/debian sid/main amd64 node-d3-time-format all 2.3.0+~2.3.1-1 [22.9 kB] Get:692 http://deb.debian.org/debian sid/main amd64 node-d3-scale all 2.2.2+~2.2.6-1 [42.7 kB] Get:693 http://deb.debian.org/debian sid/main amd64 node-d3-scale-chromatic all 1.5.0+~1.5.1-1 [21.4 kB] Get:694 http://deb.debian.org/debian sid/main amd64 node-d3-shape all 1.3.7+~1.3.8-1 [54.8 kB] Get:695 http://deb.debian.org/debian sid/main amd64 node-d3-voronoi all 1.1.4+~1.1.9-1 [19.8 kB] Get:696 http://deb.debian.org/debian sid/main amd64 node-d3-zoom all 1.8.3+~1.8.4-1 [26.8 kB] Get:697 http://deb.debian.org/debian sid/main amd64 node-d3 all 5.16.0+~cs5.28.10-2 [223 kB] Get:698 http://deb.debian.org/debian sid/main amd64 ataqv amd64 1.3.1+ds-2+b2 [3400 kB] Get:699 http://deb.debian.org/debian sid/main amd64 atropos amd64 1.1.32+dfsg-2+b2 [225 kB] Get:700 http://deb.debian.org/debian sid/main amd64 python3-six all 1.17.0-1 [16.5 kB] Get:701 http://deb.debian.org/debian sid/main amd64 python3-bcbio-gff all 0.7.1-2 [33.7 kB] Get:702 http://deb.debian.org/debian sid/main amd64 libdsdp-5.8t64 amd64 5.8-10.1 [181 kB] Get:703 http://deb.debian.org/debian sid/main amd64 libglpk40 amd64 5.0-1+b2 [401 kB] Get:704 http://deb.debian.org/debian sid/main amd64 python3-cvxopt amd64 1.3.0+dfsg-1+b9 [265 kB] Get:705 http://deb.debian.org/debian sid/main amd64 python3-isodate all 0.7.0-1 [19.4 kB] Get:706 http://deb.debian.org/debian sid/main amd64 python3-rpds-py amd64 0.21.0-2+b1 [257 kB] Get:707 http://deb.debian.org/debian sid/main amd64 python3-referencing all 0.35.1-2 [23.5 kB] Get:708 http://deb.debian.org/debian sid/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get:709 http://deb.debian.org/debian sid/main amd64 python3-jsonschema all 4.19.2-6 [71.4 kB] Get:710 http://deb.debian.org/debian sid/main amd64 python3-networkx all 3.2.1-5 [13.0 MB] Get:711 http://deb.debian.org/debian sid/main amd64 python3-pytz all 2025.1-3 [150 kB] Get:712 http://deb.debian.org/debian sid/main amd64 python3-tz all 2025.1-3 [4004 B] Get:713 http://deb.debian.org/debian sid/main amd64 python3-pandas-lib amd64 2.2.3+dfsg-8+b1 [4517 kB] Get:714 http://deb.debian.org/debian sid/main amd64 python3-pandas all 2.2.3+dfsg-8 [3097 kB] Get:715 http://deb.debian.org/debian sid/main amd64 python3-pyfaidx all 0.8.1.3-1 [29.1 kB] Get:716 http://deb.debian.org/debian sid/main amd64 python3-pyfastx amd64 2.2.0-1+b1 [58.1 kB] Get:717 http://deb.debian.org/debian sid/main amd64 python3-treetime all 0.11.4-1 [938 kB] Get:718 http://deb.debian.org/debian sid/main amd64 python3-xopen all 1.7.0-3 [16.8 kB] Get:719 http://deb.debian.org/debian sid/main amd64 python3-jmespath all 1.0.1-1 [21.1 kB] Get:720 http://deb.debian.org/debian sid/main amd64 python3-urllib3 all 2.3.0-2 [114 kB] Get:721 http://deb.debian.org/debian sid/main amd64 python3-certifi all 2025.1.31+ds-1 [9652 B] Get:722 http://deb.debian.org/debian sid/main amd64 python3-charset-normalizer amd64 3.4.1-1+b1 [125 kB] Get:723 http://deb.debian.org/debian sid/main amd64 python3-idna all 3.10-1 [42.0 kB] Get:724 http://deb.debian.org/debian sid/main amd64 python3-requests all 2.32.3+dfsg-4 [72.1 kB] Get:725 http://deb.debian.org/debian sid/main amd64 python3-botocore all 1.37.9+repack-1 [7311 kB] Get:726 http://deb.debian.org/debian sid/main amd64 python3-s3transfer all 0.11.2-2 [57.3 kB] Get:727 http://deb.debian.org/debian sid/main amd64 python3-boto3 all 1.37.9-1 [339 kB] Get:728 http://deb.debian.org/debian sid/main amd64 python3-schedule all 1.2.2-1 [14.9 kB] Get:729 http://deb.debian.org/debian sid/main amd64 python3-seaborn all 0.13.2-5 [215 kB] Get:730 http://deb.debian.org/debian sid/main amd64 python3-cffi-backend amd64 1.17.1-2+b2 [93.6 kB] Get:731 http://deb.debian.org/debian sid/main amd64 python3-zstandard amd64 0.23.0-4 [351 kB] Get:732 http://deb.debian.org/debian sid/main amd64 python3-pygtrie all 2.2-3 [17.1 kB] Get:733 http://deb.debian.org/debian sid/main amd64 seqmagick all 0.8.6-3 [40.1 kB] Get:734 http://deb.debian.org/debian sid/main amd64 python3-parso all 0.8.4-1 [67.8 kB] Get:735 http://deb.debian.org/debian sid/main amd64 python3-typeshed all 0.0~git20241223.ea91db2-1 [1530 kB] Get:736 http://deb.debian.org/debian sid/main amd64 python3-jedi all 0.19.1+ds1-1 [691 kB] Get:737 http://deb.debian.org/debian sid/main amd64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get:738 http://deb.debian.org/debian sid/main amd64 python3-matplotlib-inline all 0.1.7-1 [9032 B] Get:739 http://deb.debian.org/debian sid/main amd64 python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB] Get:740 http://deb.debian.org/debian sid/main amd64 python3-prompt-toolkit all 3.0.50-1 [278 kB] Get:741 http://deb.debian.org/debian sid/main amd64 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get:742 http://deb.debian.org/debian sid/main amd64 python3-asttokens all 3.0.0-1 [20.1 kB] Get:743 http://deb.debian.org/debian sid/main amd64 python3-executing all 2.2.0-0.1 [24.5 kB] Get:744 http://deb.debian.org/debian sid/main amd64 python3-pure-eval all 0.2.3-1 [11.2 kB] Get:745 http://deb.debian.org/debian sid/main amd64 python3-stack-data all 0.6.3-1 [21.6 kB] Get:746 http://deb.debian.org/debian sid/main amd64 python3-ptyprocess all 0.7.0-6 [14.5 kB] Get:747 http://deb.debian.org/debian sid/main amd64 python3-pexpect all 4.9-3 [55.6 kB] Get:748 http://deb.debian.org/debian sid/main amd64 python3-ipython all 8.30.0-2 [568 kB] Get:749 http://deb.debian.org/debian sid/main amd64 python3-ipdb all 0.13.13-3 [17.5 kB] Get:750 http://deb.debian.org/debian sid/main amd64 raxml amd64 8.2.13+dfsg-2 [1508 kB] Get:751 http://deb.debian.org/debian sid/main amd64 fasttree amd64 2.1.11-2 [181 kB] Get:752 http://deb.debian.org/debian sid/main amd64 vcftools amd64 0.1.16-3+b1 [431 kB] Get:753 http://deb.debian.org/debian sid/main amd64 augur all 24.4.0-1 [261 kB] Get:754 http://deb.debian.org/debian sid/main amd64 libbamtools2.5.2 amd64 2.5.2+dfsg-6+b1 [161 kB] Get:755 http://deb.debian.org/debian sid/main amd64 libmysql++3t64 amd64 3.2.5-2.3+b1 [158 kB] Get:756 http://deb.debian.org/debian sid/main amd64 augustus-data all 3.5.0+dfsg-4 [20.3 MB] Get:757 http://deb.debian.org/debian sid/main amd64 augustus amd64 3.5.0+dfsg-4+b5 [2167 kB] Get:758 http://deb.debian.org/debian sid/main amd64 autodock amd64 4.2.6-9 [167 kB] Get:759 http://deb.debian.org/debian sid/main amd64 libboost-program-options1.83.0 amd64 1.83.0-4.1+b2 [347 kB] Get:760 http://deb.debian.org/debian sid/main amd64 autodock-vina amd64 1.2.7-1 [273 kB] Get:761 http://deb.debian.org/debian sid/main amd64 autogrid amd64 4.2.6-9 [47.9 kB] Get:762 http://deb.debian.org/debian sid/main amd64 libavahi-core7 amd64 0.8-16 [106 kB] Get:763 http://deb.debian.org/debian sid/main amd64 libdaemon0 amd64 0.14-7.1+b3 [13.0 kB] Get:764 http://deb.debian.org/debian sid/main amd64 avahi-daemon amd64 0.8-16 [83.6 kB] Get:765 http://deb.debian.org/debian sid/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get:766 http://deb.debian.org/debian sid/main amd64 libglew2.2 amd64 2.2.0-4+b2 [168 kB] Get:767 http://deb.debian.org/debian sid/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get:768 http://deb.debian.org/debian sid/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get:769 http://deb.debian.org/debian sid/main amd64 libhdf5-310 amd64 1.14.5+repack-3 [1344 kB] Get:770 http://deb.debian.org/debian sid/main amd64 libopengl0 amd64 1.7.0-1+b2 [30.9 kB] Get:771 http://deb.debian.org/debian sid/main amd64 libb2-1 amd64 0.98.1-1.1+b2 [41.7 kB] Get:772 http://deb.debian.org/debian sid/main amd64 libqt6core6t64 amd64 6.8.2+dfsg-5+b1 [1840 kB] Get:773 http://deb.debian.org/debian sid/main amd64 libqt6concurrent6 amd64 6.8.2+dfsg-5+b1 [40.8 kB] Get:774 http://deb.debian.org/debian sid/main amd64 libqt6dbus6 amd64 6.8.2+dfsg-5+b1 [265 kB] Get:775 http://deb.debian.org/debian sid/main amd64 libts0t64 amd64 1.22-1.1+b1 [61.7 kB] Get:776 http://deb.debian.org/debian sid/main amd64 libxcb-cursor0 amd64 0.1.5-1 [17.1 kB] Get:777 http://deb.debian.org/debian sid/main amd64 libqt6gui6 amd64 6.8.2+dfsg-5+b1 [3151 kB] Get:778 http://deb.debian.org/debian sid/main amd64 libduktape207 amd64 2.7.0-2+b2 [135 kB] Get:779 http://deb.debian.org/debian sid/main amd64 libproxy1v5 amd64 0.5.9-1 [26.4 kB] Get:780 http://deb.debian.org/debian sid/main amd64 libqt6network6 amd64 6.8.2+dfsg-5+b1 [804 kB] Get:781 http://deb.debian.org/debian sid/main amd64 libqt6opengl6 amd64 6.8.2+dfsg-5+b1 [411 kB] Get:782 http://deb.debian.org/debian sid/main amd64 libqt6widgets6 amd64 6.8.2+dfsg-5+b1 [2640 kB] Get:783 http://deb.debian.org/debian sid/main amd64 libqt6openglwidgets6 amd64 6.8.2+dfsg-5+b1 [49.7 kB] Get:784 http://deb.debian.org/debian sid/main amd64 libqt6svg6 amd64 6.8.2-3 [184 kB] Get:785 http://deb.debian.org/debian sid/main amd64 libsymspg2 amd64 2.6.0-1 [194 kB] Get:786 http://deb.debian.org/debian sid/main amd64 libavogadro2-1t64 amd64 1.100.0-1 [2614 kB] Get:787 http://deb.debian.org/debian sid/main amd64 avogadro amd64 1.100.0-2 [991 kB] Get:788 http://deb.debian.org/debian sid/main amd64 avogadro-utils amd64 1.100.0-1 [106 kB] Get:789 http://deb.debian.org/debian sid/main amd64 libqes0 amd64 0.2.8+ds-1 [15.3 kB] Get:790 http://deb.debian.org/debian sid/main amd64 axe-demultiplexer amd64 0.3.3+dfsg-4+b1 [214 kB] Get:791 http://deb.debian.org/debian sid/main amd64 baitfisher amd64 1.2.7+git20211020.de26d5c+dfsg-2 [217 kB] Get:792 http://deb.debian.org/debian sid/main amd64 libboost-json1.83.0 amd64 1.83.0-4.1+b2 [357 kB] Get:793 http://deb.debian.org/debian sid/main amd64 libboost-random1.83.0 amd64 1.83.0-4.1+b2 [239 kB] Get:794 http://deb.debian.org/debian sid/main amd64 libfmt10 amd64 10.1.1+ds1-4 [127 kB] Get:795 http://deb.debian.org/debian sid/main amd64 bali-phy amd64 4.0-1 [10.1 MB] Get:796 http://deb.debian.org/debian sid/main amd64 libboost-regex1.83.0 amd64 1.83.0-4.1+b2 [330 kB] Get:797 http://deb.debian.org/debian sid/main amd64 libboost-serialization1.83.0 amd64 1.83.0-4.1+b2 [334 kB] Get:798 http://deb.debian.org/debian sid/main amd64 libqt5xml5t64 amd64 5.15.15+dfsg-4+b1 [126 kB] Get:799 http://deb.debian.org/debian sid/main amd64 libball1.5-data all 1.5.0+git20180813.37fc53c-11 [21.1 MB] Get:800 http://deb.debian.org/debian sid/main amd64 libball1.5 amd64 1.5.0+git20180813.37fc53c-11+b6 [3398 kB] Get:801 http://deb.debian.org/debian sid/main amd64 libglu1-mesa amd64 9.0.2-1.1+b3 [184 kB] Get:802 http://deb.debian.org/debian sid/main amd64 libqt5opengl5t64 amd64 5.15.15+dfsg-4+b1 [151 kB] Get:803 http://deb.debian.org/debian sid/main amd64 libqt5test5t64 amd64 5.15.15+dfsg-4+b1 [151 kB] Get:804 http://deb.debian.org/debian sid/main amd64 libqt5webengine-data all 5.15.18+dfsg-2 [7289 kB] Get:805 http://deb.debian.org/debian sid/main amd64 libqt5qml5 amd64 5.15.15+dfsg-3 [1377 kB] Get:806 http://deb.debian.org/debian sid/main amd64 libqt5qmlmodels5 amd64 5.15.15+dfsg-3 [193 kB] Get:807 http://deb.debian.org/debian sid/main amd64 libqt5quick5 amd64 5.15.15+dfsg-3 [1610 kB] Get:808 http://deb.debian.org/debian sid/main amd64 libqt5quickwidgets5 amd64 5.15.15+dfsg-3 [40.2 kB] Get:809 http://deb.debian.org/debian sid/main amd64 libharfbuzz-subset0 amd64 10.2.0-1+b1 [560 kB] Get:810 http://deb.debian.org/debian sid/main amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1+b1 [53.3 kB] Get:811 http://deb.debian.org/debian sid/main amd64 libopus0 amd64 1.5.2-2 [2852 kB] Get:812 http://deb.debian.org/debian sid/main amd64 libqt5positioning5 amd64 5.15.15+dfsg-3+b1 [207 kB] Get:813 http://deb.debian.org/debian sid/main amd64 libqt5webchannel5 amd64 5.15.15-2 [58.3 kB] Get:814 http://deb.debian.org/debian sid/main amd64 libvpx9 amd64 1.15.0-2 [1115 kB] Get:815 http://deb.debian.org/debian sid/main amd64 libqt5webenginecore5 amd64 5.15.18+dfsg-2+b1 [41.0 MB] Get:816 http://deb.debian.org/debian sid/main amd64 libqt5webenginewidgets5 amd64 5.15.18+dfsg-2+b1 [122 kB] Get:817 http://deb.debian.org/debian sid/main amd64 libballview1.5 amd64 1.5.0+git20180813.37fc53c-11+b6 [1509 kB] Get:818 http://deb.debian.org/debian sid/main amd64 ballview amd64 1.5.0+git20180813.37fc53c-11+b6 [196 kB] Get:819 http://deb.debian.org/debian sid/main amd64 sysstat amd64 12.7.5-2 [623 kB] Get:820 http://deb.debian.org/debian sid/main amd64 parallel all 20240222+ds-2 [2163 kB] Get:821 http://deb.debian.org/debian sid/main amd64 bamclipper all 1.0.0-3 [6436 B] Get:822 http://deb.debian.org/debian sid/main amd64 bamkit all 0.0.1+git20170413.ccd079d-3 [14.5 kB] Get:823 http://deb.debian.org/debian sid/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB] Get:824 http://deb.debian.org/debian sid/main amd64 bamtools amd64 2.5.2+dfsg-6+b1 [207 kB] Get:825 http://deb.debian.org/debian sid/main amd64 bandage amd64 0.9.0-2+b1 [987 kB] Get:826 http://deb.debian.org/debian sid/main amd64 hmmer amd64 3.4+dfsg-2 [1062 kB] Get:827 http://deb.debian.org/debian sid/main amd64 bedtools amd64 2.31.1+dfsg-2 [678 kB] Get:828 http://deb.debian.org/debian sid/main amd64 barrnap all 0.9+dfsg-4 [526 kB] Get:829 http://deb.debian.org/debian sid/main amd64 libmpj-java all 0.44+dfsg-4 [447 kB] Get:830 http://deb.debian.org/debian sid/main amd64 bbmap all 39.18+dfsg-1 [10.4 MB] Get:831 http://deb.debian.org/debian sid/main amd64 bc amd64 1.07.1-4 [103 kB] Get:832 http://deb.debian.org/debian sid/main amd64 libgatbcore3 amd64 1.4.2+dfsg-13+b4 [1837 kB] Get:833 http://deb.debian.org/debian sid/main amd64 bcalm amd64 2.2.3-5+b3 [35.7 kB] Get:834 http://deb.debian.org/debian sid/main amd64 bcftools amd64 1.21-1 [784 kB] Get:835 http://deb.debian.org/debian sid/main amd64 libqt6core5compat6 amd64 6.8.2-3+b1 [137 kB] Get:836 http://deb.debian.org/debian sid/main amd64 libquazip1-qt6-1t64 amd64 1.4-1.1+b2 [90.6 kB] Get:837 http://deb.debian.org/debian sid/main amd64 libodsstream0 amd64 0.9.7-1+b2 [75.9 kB] Get:838 http://deb.debian.org/debian sid/main amd64 libqt6printsupport6 amd64 6.8.2+dfsg-5+b1 [218 kB] Get:839 http://deb.debian.org/debian sid/main amd64 imagemagick-7.q16 amd64 8:7.1.1.43+dfsg1-1 [726 kB] Get:840 http://deb.debian.org/debian sid/main amd64 imagemagick amd64 8:7.1.1.43+dfsg1-1 [20.0 kB] Get:841 http://deb.debian.org/debian sid/main amd64 beads amd64 1.1.22-1+b3 [446 kB] Get:842 http://deb.debian.org/debian sid/main amd64 beagle all 241217-3 [378 kB] Get:843 http://deb.debian.org/debian sid/main amd64 libclc-19-dev all 1:19.1.7-3 [66.0 kB] Get:844 http://deb.debian.org/debian sid/main amd64 libclang-common-19-dev amd64 1:19.1.7-3 [740 kB] Get:845 http://deb.debian.org/debian sid/main amd64 libclc-19 all 1:19.1.7-3 [12.1 MB] Get:846 http://deb.debian.org/debian sid/main amd64 libclang-cpp19 amd64 1:19.1.7-3 [13.2 MB] Get:847 http://deb.debian.org/debian sid/main amd64 libllvmspirvlib19.1 amd64 19.1.3-1 [895 kB] Get:848 http://deb.debian.org/debian sid/main amd64 mesa-opencl-icd amd64 25.0.2-1 [24.3 MB] Get:849 http://deb.debian.org/debian sid/main amd64 libhmsbeagle1v5 amd64 4.0.1+dfsg-3 [124 kB] Get:850 http://deb.debian.org/debian sid/main amd64 libhmsbeagle-java amd64 4.0.1+dfsg-3 [28.6 kB] Get:851 http://deb.debian.org/debian sid/main amd64 libcolt-free-java all 1.2.0+dfsg-8 [440 kB] Get:852 http://deb.debian.org/debian sid/main amd64 libcommons-math-java all 2.2-9 [933 kB] Get:853 http://deb.debian.org/debian sid/main amd64 libitext1-java all 1.4-7 [1257 kB] Get:854 http://deb.debian.org/debian sid/main amd64 libjam-java all 0.1.git20240425.aec45be+dfsg-1 [168 kB] Get:855 http://deb.debian.org/debian sid/main amd64 libjdom1-java all 1.1.3-3 [155 kB] Get:856 http://deb.debian.org/debian sid/main amd64 libjebl2-java all 0.1+git20230701.b3c0f25-1 [532 kB] Get:857 http://deb.debian.org/debian sid/main amd64 libmtj-java all 0.9.14+dfsg-7 [126 kB] Get:858 http://deb.debian.org/debian sid/main amd64 libnucleotidelikelihoodcore0 amd64 1.10.4+dfsg-6 [7496 B] Get:859 http://deb.debian.org/debian sid/main amd64 f2j amd64 0.8.1+dfsg-5 [163 kB] Get:860 http://deb.debian.org/debian sid/main amd64 libf2j-java all 0.8.1+dfsg-5 [62.3 kB] Get:861 http://deb.debian.org/debian sid/main amd64 libjlapack-java all 0.8~dfsg-6 [926 kB] Get:862 http://deb.debian.org/debian sid/main amd64 libnetlib-java all 0.9.3-7 [451 kB] Get:863 http://deb.debian.org/debian sid/main amd64 beast-mcmc all 1.10.4+dfsg-6 [5781 kB] Get:864 http://deb.debian.org/debian sid/main amd64 libgtk2.0-common all 2.24.33-7 [2661 kB] Get:865 http://deb.debian.org/debian sid/main amd64 libgtk2.0-0t64 amd64 2.24.33-7 [1828 kB] Get:866 http://deb.debian.org/debian sid/main amd64 libopenjfx-jni amd64 11.0.11+1-6 [22.7 MB] Get:867 http://deb.debian.org/debian sid/main amd64 libopenjfx-java all 11.0.11+1-6 [8941 kB] Get:868 http://deb.debian.org/debian sid/main amd64 openjfx amd64 11.0.11+1-6 [6948 B] Get:869 http://deb.debian.org/debian sid/main amd64 beast2-mcmc all 2.7.6+dfsg-1 [1821 kB] Get:870 http://deb.debian.org/debian sid/main amd64 tcsh amd64 6.24.13-2 [454 kB] Get:871 http://deb.debian.org/debian sid/main amd64 bedops amd64 2.4.41+dfsg-3 [1693 kB] Get:872 http://deb.debian.org/debian sid/main amd64 libgbtools0t64 amd64 4.44.1+dfsg-7.1+b3 [140 kB] Get:873 http://deb.debian.org/debian sid/main amd64 belvu amd64 4.44.1+dfsg-7.1+b3 [1055 kB] Get:874 http://deb.debian.org/debian sid/main amd64 libprotobuf32t64 amd64 3.21.12-10+b6 [981 kB] Get:875 http://deb.debian.org/debian sid/main amd64 berkeley-express amd64 1.5.3+dfsg-3+b3 [233 kB] Get:876 http://deb.debian.org/debian sid/main amd64 libbifrost0 amd64 1.3.1-1 [428 kB] Get:877 http://deb.debian.org/debian sid/main amd64 bifrost amd64 1.3.1-1 [512 kB] Get:878 http://deb.debian.org/debian sid/main amd64 libsframe1 amd64 2.44-3 [78.4 kB] Get:879 http://deb.debian.org/debian sid/main amd64 binutils-common amd64 2.44-3 [2509 kB] Get:880 http://deb.debian.org/debian sid/main amd64 libbinutils amd64 2.44-3 [534 kB] Get:881 http://deb.debian.org/debian sid/main amd64 libgprofng0 amd64 2.44-3 [808 kB] Get:882 http://deb.debian.org/debian sid/main amd64 libctf-nobfd0 amd64 2.44-3 [156 kB] Get:883 http://deb.debian.org/debian sid/main amd64 libctf0 amd64 2.44-3 [88.6 kB] Get:884 http://deb.debian.org/debian sid/main amd64 binutils-x86-64-linux-gnu amd64 2.44-3 [1014 kB] Get:885 http://deb.debian.org/debian sid/main amd64 binutils amd64 2.44-3 [265 kB] Get:886 http://deb.debian.org/debian sid/main amd64 libopenblas0 amd64 0.3.29+ds-3 [42.7 kB] Get:887 http://deb.debian.org/debian sid/main amd64 bio-eagle amd64 2.4.1-3+b3 [233 kB] Get:888 http://deb.debian.org/debian sid/main amd64 bio-rainbow amd64 2.0.4+dfsg-2 [60.3 kB] Get:889 http://deb.debian.org/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:890 http://deb.debian.org/debian sid/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:891 http://deb.debian.org/debian sid/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:892 http://deb.debian.org/debian sid/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:893 http://deb.debian.org/debian sid/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:894 http://deb.debian.org/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:895 http://deb.debian.org/debian sid/main amd64 libparams-util-perl amd64 1.102-3+b1 [24.4 kB] Get:896 http://deb.debian.org/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:897 http://deb.debian.org/debian sid/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:898 http://deb.debian.org/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get:899 http://deb.debian.org/debian sid/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get:900 http://deb.debian.org/debian sid/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB] Get:901 http://deb.debian.org/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get:902 http://deb.debian.org/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:903 http://deb.debian.org/debian sid/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:904 http://deb.debian.org/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:905 http://deb.debian.org/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:906 http://deb.debian.org/debian sid/main amd64 libclass-load-perl all 0.25-2 [15.3 kB] Get:907 http://deb.debian.org/debian sid/main amd64 libclass-load-xs-perl amd64 0.10-2+b4 [14.2 kB] Get:908 http://deb.debian.org/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:909 http://deb.debian.org/debian sid/main amd64 libdevel-globaldestruction-perl all 0.14-4 [7144 B] Get:910 http://deb.debian.org/debian sid/main amd64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Get:911 http://deb.debian.org/debian sid/main amd64 libclass-c3-perl all 0.35-2 [21.0 kB] Get:912 http://deb.debian.org/debian sid/main amd64 libmro-compat-perl all 0.15-2 [11.8 kB] Get:913 http://deb.debian.org/debian sid/main amd64 libdevel-overloadinfo-perl all 0.007-1 [7896 B] Get:914 http://deb.debian.org/debian sid/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:915 http://deb.debian.org/debian sid/main amd64 libeval-closure-perl all 0.14-3 [11.2 kB] Get:916 http://deb.debian.org/debian sid/main amd64 libdist-checkconflicts-perl all 0.11-2 [10.5 kB] Get:917 http://deb.debian.org/debian sid/main amd64 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B] Get:918 http://deb.debian.org/debian sid/main amd64 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB] Get:919 http://deb.debian.org/debian sid/main amd64 libpackage-stash-xs-perl amd64 0.30-1+b4 [20.9 kB] Get:920 http://deb.debian.org/debian sid/main amd64 libmoose-perl amd64 2.2207-1+b3 [766 kB] Get:921 http://deb.debian.org/debian sid/main amd64 libtext-csv-perl all 2.06-1 [116 kB] Get:922 http://deb.debian.org/debian sid/main amd64 libbambamc0 amd64 0.0.50-6+b2 [38.2 kB] Get:923 http://deb.debian.org/debian sid/main amd64 smalt amd64 0.7.6-13 [115 kB] Get:924 http://deb.debian.org/debian sid/main amd64 tabix amd64 1.21+ds-1 [496 kB] Get:925 http://deb.debian.org/debian sid/main amd64 r-cran-getopt all 1.20.4-1 [38.6 kB] Get:926 http://deb.debian.org/debian sid/main amd64 bio-tradis all 1.4.5+dfsg2-2 [80.3 kB] Get:927 http://deb.debian.org/debian sid/main amd64 rubygems-integration all 1.19 [5488 B] Get:928 http://deb.debian.org/debian sid/main amd64 rake all 13.2.1-1 [65.2 kB] Get:929 http://deb.debian.org/debian sid/main amd64 ruby-did-you-mean all 1.6.3-2 [20.9 kB] Get:930 http://deb.debian.org/debian sid/main amd64 ruby-minitest all 5.25.4-2 [66.2 kB] Get:931 http://deb.debian.org/debian sid/main amd64 ruby-net-telnet all 0.2.0-1 [13.1 kB] Get:932 http://deb.debian.org/debian sid/main amd64 ruby-power-assert all 2.0.3-1 [11.8 kB] Get:933 http://deb.debian.org/debian sid/main amd64 ruby-test-unit all 3.6.2-1 [79.1 kB] Get:934 http://deb.debian.org/debian sid/main amd64 ruby-webrick all 1.9.1-1 [59.6 kB] Get:935 http://deb.debian.org/debian sid/main amd64 ruby-xmlrpc all 0.3.3-2 [24.4 kB] Get:936 http://deb.debian.org/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-2 [52.5 kB] Get:937 http://deb.debian.org/debian sid/main amd64 libruby3.3 amd64 3.3.7-1 [6274 kB] Get:938 http://deb.debian.org/debian sid/main amd64 ruby3.3 amd64 3.3.7-1 [827 kB] Get:939 http://deb.debian.org/debian sid/main amd64 libruby amd64 1:3.3+b1 [5440 B] Get:940 http://deb.debian.org/debian sid/main amd64 ruby-rubygems all 3.6.3-1 [406 kB] Get:941 http://deb.debian.org/debian sid/main amd64 ruby amd64 1:3.3+b1 [6560 B] Get:942 http://deb.debian.org/debian sid/main amd64 bio-vcf all 0.9.5-3 [28.8 kB] Get:943 http://deb.debian.org/debian sid/main amd64 bioawk amd64 1.0-5 [57.0 kB] Get:944 http://deb.debian.org/debian sid/main amd64 libassuan9 amd64 3.0.2-2 [61.5 kB] Get:945 http://deb.debian.org/debian sid/main amd64 gpgconf amd64 2.2.46-5 [122 kB] Get:946 http://deb.debian.org/debian sid/main amd64 libksba8 amd64 1.6.7-2+b1 [136 kB] Get:947 http://deb.debian.org/debian sid/main amd64 libnpth0t64 amd64 1.8-2 [22.9 kB] Get:948 http://deb.debian.org/debian sid/main amd64 dirmngr amd64 2.2.46-5 [370 kB] Get:949 http://deb.debian.org/debian sid/main amd64 gnupg-l10n all 2.2.46-5 [703 kB] Get:950 http://deb.debian.org/debian sid/main amd64 gpg amd64 2.2.46-5 [533 kB] Get:951 http://deb.debian.org/debian sid/main amd64 pinentry-curses amd64 1.3.1-2 [86.4 kB] Get:952 http://deb.debian.org/debian sid/main amd64 gpg-agent amd64 2.2.46-5 [252 kB] Get:953 http://deb.debian.org/debian sid/main amd64 gpgsm amd64 2.2.46-5 [256 kB] Get:954 http://deb.debian.org/debian sid/main amd64 gnupg all 2.2.46-5 [377 kB] Get:955 http://deb.debian.org/debian sid/main amd64 libgpgme11t64 amd64 1.24.2-1+b1 [345 kB] Get:956 http://deb.debian.org/debian sid/main amd64 libmaus2-2 amd64 2.0.813+ds-4 [2073 kB] Get:957 http://deb.debian.org/debian sid/main amd64 biobambam2 amd64 2.0.185+ds-2 [9425 kB] Get:958 http://deb.debian.org/debian sid/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get:959 http://deb.debian.org/debian sid/main amd64 libcapture-tiny-perl all 0.50-1 [24.6 kB] Get:960 http://deb.debian.org/debian sid/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:961 http://deb.debian.org/debian sid/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:962 http://deb.debian.org/debian sid/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] Get:963 http://deb.debian.org/debian sid/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:964 http://deb.debian.org/debian sid/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:965 http://deb.debian.org/debian sid/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:966 http://deb.debian.org/debian sid/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get:967 http://deb.debian.org/debian sid/main amd64 bioperl all 1.7.8-1 [246 kB] Get:968 http://deb.debian.org/debian sid/main amd64 libio-pty-perl amd64 1:1.20-1+b3 [34.3 kB] Get:969 http://deb.debian.org/debian sid/main amd64 libipc-run-perl all 20231003.0-2 [101 kB] Get:970 http://deb.debian.org/debian sid/main amd64 libfile-sort-perl all 1.01-3 [21.3 kB] Get:971 http://deb.debian.org/debian sid/main amd64 libbio-perl-run-perl all 1.7.3-13 [528 kB] Get:972 http://deb.debian.org/debian sid/main amd64 libfile-slurp-tiny-perl all 0.004-2 [7592 B] Get:973 http://deb.debian.org/debian sid/main amd64 libtree-dagnode-perl all 1.32-1 [61.7 kB] Get:974 http://deb.debian.org/debian sid/main amd64 liburi-perl all 5.30-1 [105 kB] Get:975 http://deb.debian.org/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:976 http://deb.debian.org/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:977 http://deb.debian.org/debian sid/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:978 http://deb.debian.org/debian sid/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:979 http://deb.debian.org/debian sid/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:980 http://deb.debian.org/debian sid/main amd64 libhtml-parser-perl amd64 3.83-1+b2 [99.7 kB] Get:981 http://deb.debian.org/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:982 http://deb.debian.org/debian sid/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get:983 http://deb.debian.org/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:984 http://deb.debian.org/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:985 http://deb.debian.org/debian sid/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:986 http://deb.debian.org/debian sid/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:987 http://deb.debian.org/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:988 http://deb.debian.org/debian sid/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:989 http://deb.debian.org/debian sid/main amd64 libnet-ssleay-perl amd64 1.94-3 [339 kB] Get:990 http://deb.debian.org/debian sid/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:991 http://deb.debian.org/debian sid/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:992 http://deb.debian.org/debian sid/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:993 http://deb.debian.org/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:994 http://deb.debian.org/debian sid/main amd64 libwww-perl all 6.78-1 [183 kB] Get:995 http://deb.debian.org/debian sid/main amd64 libxml-parser-perl amd64 2.47-1+b3 [198 kB] Get:996 http://deb.debian.org/debian sid/main amd64 libxml-perl all 0.08-4 [93.0 kB] Get:997 http://deb.debian.org/debian sid/main amd64 libxml-regexp-perl all 0.04-1.1 [7500 B] Get:998 http://deb.debian.org/debian sid/main amd64 libxml-dom-perl all 1.46-2 [152 kB] Get:999 http://deb.debian.org/debian sid/main amd64 libxml-xpathengine-perl all 0.14-2 [33.5 kB] Get:1000 http://deb.debian.org/debian sid/main amd64 libxml-dom-xpath-perl all 0.14-4 [9352 B] Get:1001 http://deb.debian.org/debian sid/main amd64 libbio-featureio-perl all 1.6.905-2 [53.2 kB] Get:1002 http://deb.debian.org/debian sid/main amd64 libxml-twig-perl all 1:3.52-3 [177 kB] Get:1003 http://deb.debian.org/debian sid/main amd64 libxml-writer-perl all 0.900-2 [26.8 kB] Get:1004 http://deb.debian.org/debian sid/main amd64 libbio-variation-perl all 1.7.5-3 [72.6 kB] Get:1005 http://deb.debian.org/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:1006 http://deb.debian.org/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:1007 http://deb.debian.org/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get:1008 http://deb.debian.org/debian sid/main amd64 libbio-cluster-perl all 1.7.3-6 [53.3 kB] Get:1009 http://deb.debian.org/debian sid/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] Get:1010 http://deb.debian.org/debian sid/main amd64 libbio-asn1-entrezgene-perl all 1.730-3 [46.3 kB] Get:1011 http://deb.debian.org/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b2 [314 kB] Get:1012 http://deb.debian.org/debian sid/main amd64 libxml-sax-expat-perl all 0.51-2 [11.1 kB] Get:1013 http://deb.debian.org/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:1014 http://deb.debian.org/debian sid/main amd64 libbio-eutilities-perl all 1.77-3 [119 kB] Get:1015 http://deb.debian.org/debian sid/main amd64 libbio-tools-run-remoteblast-perl all 1.7.3-3 [17.5 kB] Get:1016 http://deb.debian.org/debian sid/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:1017 http://deb.debian.org/debian sid/main amd64 libfcgi0t64 amd64 2.4.2-2.1+b1 [24.7 kB] Get:1018 http://deb.debian.org/debian sid/main amd64 libfcgi-perl amd64 0.82+ds-3+b2 [25.3 kB] Get:1019 http://deb.debian.org/debian sid/main amd64 libhttp-daemon-perl all 6.16-1 [23.5 kB] Get:1020 http://deb.debian.org/debian sid/main amd64 libio-sessiondata-perl all 1.03-3 [6316 B] Get:1021 http://deb.debian.org/debian sid/main amd64 libio-stringy-perl all 2.113-2 [48.3 kB] Get:1022 http://deb.debian.org/debian sid/main amd64 libconvert-binhex-perl all 1.125-3 [27.4 kB] Get:1023 http://deb.debian.org/debian sid/main amd64 libnet-smtp-ssl-perl all 1.04-2 [6548 B] Get:1024 http://deb.debian.org/debian sid/main amd64 libmailtools-perl all 2.22-1 [88.8 kB] Get:1025 http://deb.debian.org/debian sid/main amd64 libmime-tools-perl all 5.515-1 [203 kB] Get:1026 http://deb.debian.org/debian sid/main amd64 libtask-weaken-perl all 1.06-2 [9364 B] Get:1027 http://deb.debian.org/debian sid/main amd64 libsoap-lite-perl all 1.27-3 [239 kB] Get:1028 http://deb.debian.org/debian sid/main amd64 openjdk-21-jdk-headless amd64 21.0.7~7ea-1 [82.8 MB] Get:1029 http://deb.debian.org/debian sid/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B] Get:1030 http://deb.debian.org/debian sid/main amd64 bioperl-run all 1.7.3-13 [36.4 kB] Get:1031 http://deb.debian.org/debian sid/main amd64 libsquid1t64 amd64 1.9g+cvs20050121-15.1+b2 [76.8 kB] Get:1032 http://deb.debian.org/debian sid/main amd64 biosquid amd64 1.9g+cvs20050121-15.1+b2 [79.9 kB] Get:1033 http://deb.debian.org/debian sid/main amd64 biosyntax-common all 1.0.0b-6 [7140 B] Get:1034 http://deb.debian.org/debian sid/main amd64 gedit-common all 48.1-2 [1452 kB] Get:1035 http://deb.debian.org/debian sid/main amd64 iso-codes all 4.17.0-1 [3055 kB] Get:1036 http://deb.debian.org/debian sid/main amd64 gir1.2-glib-2.0 amd64 2.84.0-2 [197 kB] Get:1037 http://deb.debian.org/debian sid/main amd64 gir1.2-atk-1.0 amd64 2.56.0-3 [25.9 kB] Get:1038 http://deb.debian.org/debian sid/main amd64 gir1.2-freedesktop amd64 1.84.0-1 [60.5 kB] Get:1039 http://deb.debian.org/debian sid/main amd64 gir1.2-gdkpixbuf-2.0 amd64 2.42.12+dfsg-2 [14.2 kB] Get:1040 http://deb.debian.org/debian sid/main amd64 libharfbuzz-gobject0 amd64 10.2.0-1+b1 [33.1 kB] Get:1041 http://deb.debian.org/debian sid/main amd64 gir1.2-harfbuzz-0.0 amd64 10.2.0-1+b1 [42.4 kB] Get:1042 http://deb.debian.org/debian sid/main amd64 libpangoxft-1.0-0 amd64 1.56.3-1 [27.6 kB] Get:1043 http://deb.debian.org/debian sid/main amd64 gir1.2-pango-1.0 amd64 1.56.3-1 [39.1 kB] Get:1044 http://deb.debian.org/debian sid/main amd64 gir1.2-gtk-3.0 amd64 3.24.49-2 [224 kB] Get:1045 http://deb.debian.org/debian sid/main amd64 libgedit-gtksourceview-300-common all 299.5.0-1 [270 kB] Get:1046 http://deb.debian.org/debian sid/main amd64 libgedit-gtksourceview-300-3 amd64 299.5.0-1 [210 kB] Get:1047 http://deb.debian.org/debian sid/main amd64 gir1.2-gtksource-300 amd64 299.5.0-1 [20.1 kB] Get:1048 http://deb.debian.org/debian sid/main amd64 libgedit-amtk-5-common all 5.9.1-1 [21.9 kB] Get:1049 http://deb.debian.org/debian sid/main amd64 libgedit-amtk-5-0 amd64 5.9.1-1 [24.4 kB] Get:1050 http://deb.debian.org/debian sid/main amd64 gir1.2-amtk-5 amd64 5.9.1-1 [6660 B] Get:1051 http://deb.debian.org/debian sid/main amd64 libtepl-common all 6.12.0-2 [48.1 kB] Get:1052 http://deb.debian.org/debian sid/main amd64 libgedit-gfls-common all 0.3.0-1 [8116 B] Get:1053 http://deb.debian.org/debian sid/main amd64 libgedit-gfls-1-0 amd64 0.3.0-1 [10.4 kB] Get:1054 http://deb.debian.org/debian sid/main amd64 libhandy-1-0 amd64 1.8.3-2 [312 kB] Get:1055 http://deb.debian.org/debian sid/main amd64 libgedit-tepl-6-2 amd64 6.12.0-2+b1 [96.8 kB] Get:1056 http://deb.debian.org/debian sid/main amd64 gir1.2-tepl-6 amd64 6.12.0-2+b1 [16.3 kB] Get:1057 http://deb.debian.org/debian sid/main amd64 libgirepository-1.0-1 amd64 1.84.0-1 [116 kB] Get:1058 http://deb.debian.org/debian sid/main amd64 libgspell-1-common all 1.14.0-2 [36.5 kB] Get:1059 http://deb.debian.org/debian sid/main amd64 hunspell-en-us all 1:2020.12.07-4 [558 kB] Get:1060 http://deb.debian.org/debian sid/main amd64 hunspell-en-gb all 1:25.2.1-4 [1057 kB] Get:1061 http://deb.debian.org/debian sid/main amd64 libhunspell-1.7-0 amd64 1.7.2+really1.7.2-10+b4 [237 kB] Get:1062 http://deb.debian.org/debian sid/main amd64 libenchant-2-2 amd64 2.8.2+dfsg1-3 [56.8 kB] Get:1063 http://deb.debian.org/debian sid/main amd64 libgspell-1-3 amd64 1.14.0-2+b1 [51.5 kB] Get:1064 http://deb.debian.org/debian sid/main amd64 libpeas-common all 1.36.0-3 [49.9 kB] Get:1065 http://deb.debian.org/debian sid/main amd64 libpython3.13 amd64 3.13.2-2 [2155 kB] Get:1066 http://deb.debian.org/debian sid/main amd64 libpeas-1.0-0 amd64 1.36.0-3+b4 [60.8 kB] Get:1067 http://deb.debian.org/debian sid/main amd64 gedit amd64 48.1-2 [298 kB] Get:1068 http://deb.debian.org/debian sid/main amd64 biosyntax-gedit all 1.0.0b-6 [20.6 kB] Get:1069 http://deb.debian.org/debian sid/main amd64 libsource-highlight-common all 3.1.9-4.3 [77.5 kB] Get:1070 http://deb.debian.org/debian sid/main amd64 libsource-highlight4t64 amd64 3.1.9-4.3+b1 [335 kB] Get:1071 http://deb.debian.org/debian sid/main amd64 source-highlight amd64 3.1.9-4.3+b1 [342 kB] Get:1072 http://deb.debian.org/debian sid/main amd64 biosyntax-less all 1.0.0b-6 [14.9 kB] Get:1073 http://deb.debian.org/debian sid/main amd64 vim-runtime all 2:9.1.1113-1 [7128 kB] Get:1074 http://deb.debian.org/debian sid/main amd64 libgpm2 amd64 1.20.7-11+b2 [14.4 kB] Get:1075 http://deb.debian.org/debian sid/main amd64 libsodium23 amd64 1.0.18-1+b2 [165 kB] Get:1076 http://deb.debian.org/debian sid/main amd64 vim amd64 2:9.1.1113-1 [1665 kB] Get:1077 http://deb.debian.org/debian sid/main amd64 biosyntax-vim all 1.0.0b-6 [26.6 kB] Get:1078 http://deb.debian.org/debian sid/main amd64 biosyntax all 1.0.0b-6 [6336 B] Get:1079 http://deb.debian.org/debian sid/main amd64 bitseq amd64 0.7.5+dfsg-6 [345 kB] Get:1080 http://deb.debian.org/debian sid/main amd64 python3-click all 8.2.0+0.really.8.1.8-1 [95.4 kB] Get:1081 http://deb.debian.org/debian sid/main amd64 python3-mypy-extensions all 1.0.0-1 [6064 B] Get:1082 http://deb.debian.org/debian sid/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get:1083 http://deb.debian.org/debian sid/main amd64 black amd64 25.1.0-2 [1352 kB] Get:1084 http://deb.debian.org/debian sid/main amd64 libhdf5-cpp-310 amd64 1.14.5+repack-3 [133 kB] Get:1085 http://deb.debian.org/debian sid/main amd64 libpbcopper2.3.0 amd64 2.3.0+dfsg-2+b2 [736 kB] Get:1086 http://deb.debian.org/debian sid/main amd64 libpbbam2.4.0 amd64 2.4.0+dfsg-1+b4 [835 kB] Get:1087 http://deb.debian.org/debian sid/main amd64 libblasr5.3.5 amd64 5.3.5+dfsg-9+b2 [1121 kB] Get:1088 http://deb.debian.org/debian sid/main amd64 libpbseq amd64 5.3.5+dfsg-9+b2 [5204 B] Get:1089 http://deb.debian.org/debian sid/main amd64 blasr amd64 5.3.5+dfsg-7+b1 [238 kB] Get:1090 http://deb.debian.org/debian sid/main amd64 menu amd64 2.1.51 [355 kB] Get:1091 http://deb.debian.org/debian sid/main amd64 blends-common all 0.7.10 [15.0 kB] Get:1092 http://deb.debian.org/debian sid/main amd64 blixem amd64 4.44.1+dfsg-7.1+b3 [1381 kB] Get:1093 http://deb.debian.org/debian sid/main amd64 libnlopt0 amd64 2.7.1-6+b4 [178 kB] Get:1094 http://deb.debian.org/debian sid/main amd64 bolt-lmm amd64 2.4.1+dfsg-2 [351 kB] Get:1095 http://deb.debian.org/debian sid/main amd64 bowtie amd64 1.3.1-3 [1627 kB] Get:1096 http://deb.debian.org/debian sid/main amd64 boxshade amd64 3.3.1-14 [55.8 kB] Get:1097 http://deb.debian.org/debian sid/main amd64 libbpp-core4t64 amd64 2.4.1-13+b1 [629 kB] Get:1098 http://deb.debian.org/debian sid/main amd64 libbpp-seq12t64 amd64 2.4.1-13 [510 kB] Get:1099 http://deb.debian.org/debian sid/main amd64 libbpp-phyl12t64 amd64 2.4.1-11+b2 [1711 kB] Get:1100 http://deb.debian.org/debian sid/main amd64 libbpp-qt2t64 amd64 2.4.1-12+b1 [75.6 kB] Get:1101 http://deb.debian.org/debian sid/main amd64 bppphyview amd64 0.6.1-5 [107 kB] Get:1102 http://deb.debian.org/debian sid/main amd64 libbpp-popgen8t64 amd64 2.4.1-11+b2 [244 kB] Get:1103 http://deb.debian.org/debian sid/main amd64 bppsuite amd64 2.4.1-7 [389 kB] Get:1104 http://deb.debian.org/debian sid/main amd64 fastjar amd64 2:0.98-7 [80.1 kB] Get:1105 http://deb.debian.org/debian sid/main amd64 jarwrapper all 0.80 [9692 B] Get:1106 http://deb.debian.org/debian sid/main amd64 libcommons-lang-java all 2.6-10 [273 kB] Get:1107 http://deb.debian.org/debian sid/main amd64 libjargs-java all 1.0.0-5 [14.9 kB] Get:1108 http://deb.debian.org/debian sid/main amd64 cgview all 0.0.20100111-7 [2220 kB] Get:1109 http://deb.debian.org/debian sid/main amd64 libswing-layout-java all 1.0.4-4.1 [44.4 kB] Get:1110 http://deb.debian.org/debian sid/main amd64 brig amd64 0.95+dfsg-3 [115 kB] Get:1111 http://deb.debian.org/debian sid/main amd64 btllib-tools amd64 1.4.10+dfsg-1 [138 kB] Get:1112 http://deb.debian.org/debian sid/main amd64 bubblewrap amd64 0.11.0-2 [52.0 kB] Get:1113 http://deb.debian.org/debian sid/main amd64 libc-dev-bin amd64 2.41-6 [57.0 kB] Get:1114 http://deb.debian.org/debian sid/main amd64 linux-libc-dev all 6.12.19-1 [2534 kB] Get:1115 http://deb.debian.org/debian sid/main amd64 libcrypt-dev amd64 1:4.4.38-1 [119 kB] Get:1116 http://deb.debian.org/debian sid/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Get:1117 http://deb.debian.org/debian sid/main amd64 libc6-dev amd64 2.41-6 [1988 kB] Get:1118 http://deb.debian.org/debian sid/main amd64 libisl23 amd64 0.27-1 [659 kB] Get:1119 http://deb.debian.org/debian sid/main amd64 libmpc3 amd64 1.3.1-1+b3 [52.2 kB] Get:1120 http://deb.debian.org/debian sid/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-19 [11.0 MB] Get:1121 http://deb.debian.org/debian sid/main amd64 cpp-14 amd64 14.2.0-19 [1280 B] Get:1122 http://deb.debian.org/debian sid/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1 [4840 B] Get:1123 http://deb.debian.org/debian sid/main amd64 cpp amd64 4:14.2.0-1 [1568 B] Get:1124 http://deb.debian.org/debian sid/main amd64 libcc1-0 amd64 14.2.0-19 [42.8 kB] Get:1125 http://deb.debian.org/debian sid/main amd64 libitm1 amd64 14.2.0-19 [26.0 kB] Get:1126 http://deb.debian.org/debian sid/main amd64 libasan8 amd64 14.2.0-19 [2725 kB] Get:1127 http://deb.debian.org/debian sid/main amd64 liblsan0 amd64 14.2.0-19 [1204 kB] Get:1128 http://deb.debian.org/debian sid/main amd64 libtsan2 amd64 14.2.0-19 [2460 kB] Get:1129 http://deb.debian.org/debian sid/main amd64 libubsan1 amd64 14.2.0-19 [1074 kB] Get:1130 http://deb.debian.org/debian sid/main amd64 libhwasan0 amd64 14.2.0-19 [1488 kB] Get:1131 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 14.2.0-19 [145 kB] Get:1132 http://deb.debian.org/debian sid/main amd64 libgcc-14-dev amd64 14.2.0-19 [2672 kB] Get:1133 http://deb.debian.org/debian sid/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-19 [21.4 MB] Get:1134 http://deb.debian.org/debian sid/main amd64 gcc-14 amd64 14.2.0-19 [540 kB] Get:1135 http://deb.debian.org/debian sid/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1 [1436 B] Get:1136 http://deb.debian.org/debian sid/main amd64 gcc amd64 4:14.2.0-1 [5136 B] Get:1137 http://deb.debian.org/debian sid/main amd64 libstdc++-14-dev amd64 14.2.0-19 [2376 kB] Get:1138 http://deb.debian.org/debian sid/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-19 [12.1 MB] Get:1139 http://deb.debian.org/debian sid/main amd64 g++-14 amd64 14.2.0-19 [22.5 kB] Get:1140 http://deb.debian.org/debian sid/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:1141 http://deb.debian.org/debian sid/main amd64 g++ amd64 4:14.2.0-1 [1344 B] Get:1142 http://deb.debian.org/debian sid/main amd64 libdpkg-perl all 1.22.18 [649 kB] Get:1143 http://deb.debian.org/debian sid/main amd64 patch amd64 2.7.6-7 [128 kB] Get:1144 http://deb.debian.org/debian sid/main amd64 dpkg-dev all 1.22.18 [1338 kB] Get:1145 http://deb.debian.org/debian sid/main amd64 build-essential amd64 12.12 [4624 B] Get:1146 http://deb.debian.org/debian sid/main amd64 prodigal amd64 1:2.6.3-6 [508 kB] Get:1147 http://deb.debian.org/debian sid/main amd64 busco amd64 5.5.0-3 [293 kB] Get:1148 http://deb.debian.org/debian sid/main amd64 bustools amd64 0.43.2+dfsg-1 [329 kB] Get:1149 http://deb.debian.org/debian sid/main amd64 bwa amd64 0.7.18-1 [212 kB] Get:1150 http://deb.debian.org/debian sid/main amd64 bzip2-doc all 1.0.8-6 [505 kB] Get:1151 http://deb.debian.org/debian sid/main amd64 libfilesys-df-perl amd64 0.92-7+b4 [11.9 kB] Get:1152 http://deb.debian.org/debian sid/main amd64 libfastutil-java all 8.5.15+dfsg-1 [20.0 MB] Get:1153 http://deb.debian.org/debian sid/main amd64 jaligner all 1.0+dfsg-11 [133 kB] Get:1154 http://deb.debian.org/debian sid/main amd64 libssw-java amd64 1.1-15+b2 [18.6 kB] Get:1155 http://deb.debian.org/debian sid/main amd64 mhap all 2.1.3+dfsg-3 [160 kB] Get:1156 http://deb.debian.org/debian sid/main amd64 canu amd64 2.2+dfsg-5 [1413 kB] Get:1157 http://deb.debian.org/debian sid/main amd64 libgflags2.2 amd64 2.2.2-2 [83.5 kB] Get:1158 http://deb.debian.org/debian sid/main amd64 libunwind8 amd64 1.8.1-0.1 [56.3 kB] Get:1159 http://deb.debian.org/debian sid/main amd64 libgoogle-glog0v6t64 amd64 0.6.0-2.1 [66.1 kB] Get:1160 http://deb.debian.org/debian sid/main amd64 libcassie1v5 amd64 1.0.9-4+b1 [41.7 kB] Get:1161 http://deb.debian.org/debian sid/main amd64 cassiopee amd64 1.0.9-4+b1 [17.6 kB] Get:1162 http://deb.debian.org/debian sid/main amd64 diamond-aligner amd64 2.1.11-2 [2648 kB] Get:1163 http://deb.debian.org/debian sid/main amd64 cat-bat amd64 5.3-2 [39.4 kB] Get:1164 http://deb.debian.org/debian sid/main amd64 python3-periodictable all 2.0.2-1 [492 kB] Get:1165 http://deb.debian.org/debian sid/main amd64 python3-cclib all 1.8-1 [244 kB] Get:1166 http://deb.debian.org/debian sid/main amd64 cclib all 1.8-1 [17.9 kB] Get:1167 http://deb.debian.org/debian sid/main amd64 ncbi-data all 6.1.20170106+dfsg2-5 [3537 kB] Get:1168 http://deb.debian.org/debian sid/main amd64 liblmdb0 amd64 0.9.31-1+b2 [45.2 kB] Get:1169 http://deb.debian.org/debian sid/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB] Get:1170 http://deb.debian.org/debian sid/main amd64 ncbi-blast+ amd64 2.16.0+ds-6+b1 [15.2 MB] Get:1171 http://deb.debian.org/debian sid/main amd64 ncbi-blast+-legacy all 2.16.0+ds-6 [10.4 kB] Get:1172 http://deb.debian.org/debian sid/main amd64 liberror-perl all 0.17030-1 [26.9 kB] Get:1173 http://deb.debian.org/debian sid/main amd64 libtie-ixhash-perl all 1.23-4 [11.7 kB] Get:1174 http://deb.debian.org/debian sid/main amd64 cct all 1:1.0.3-1 [36.3 MB] Get:1175 http://deb.debian.org/debian sid/main amd64 libgclib3 amd64 0.12.7+ds-6 [156 kB] Get:1176 http://deb.debian.org/debian sid/main amd64 cdbfasta amd64 1.00+git20230710.da8f5ba+dfsg-1 [128 kB] Get:1177 http://deb.debian.org/debian sid/main amd64 hisat2 amd64 2.2.1-5+b2 [3803 kB] Get:1178 http://deb.debian.org/debian sid/main amd64 libjellyfish-2.0-2 amd64 2.3.1-4+b1 [67.3 kB] Get:1179 http://deb.debian.org/debian sid/main amd64 jellyfish amd64 2.3.1-4+b1 [807 kB] Get:1180 http://deb.debian.org/debian sid/main amd64 centrifuge amd64 1.0.4.2-1 [582 kB] Get:1181 http://deb.debian.org/debian sid/main amd64 python3-yaml amd64 6.0.2-1+b2 [136 kB] Get:1182 http://deb.debian.org/debian sid/main amd64 python3-yamlordereddictloader all 0.4.0-1.1 [5040 B] Get:1183 http://deb.debian.org/debian sid/main amd64 python3-airr all 1.5.1-1 [43.3 kB] Get:1184 http://deb.debian.org/debian sid/main amd64 vsearch amd64 2.30.0-1 [436 kB] Get:1185 http://deb.debian.org/debian sid/main amd64 python3-presto amd64 0.7.2-2 [79.7 kB] Get:1186 http://deb.debian.org/debian sid/main amd64 changeo all 1.3.0-3 [108 kB] Get:1187 http://deb.debian.org/debian sid/main amd64 chemical-mime-data all 0.1.94-7.2 [46.7 kB] Get:1188 http://deb.debian.org/debian sid/main amd64 microbiomeutil-data all 20101212+dfsg1-6 [1565 kB] Get:1189 http://deb.debian.org/debian sid/main amd64 chimeraslayer all 20101212+dfsg1-6 [33.1 kB] Get:1190 http://deb.debian.org/debian sid/main amd64 libjheatchart-java all 0.6-2 [8652 B] Get:1191 http://deb.debian.org/debian sid/main amd64 chromhmm all 1.26+dfsg-3 [201 kB] Get:1192 http://deb.debian.org/debian sid/main amd64 chromimpute all 1.0.3+dfsg-5 [74.4 kB] Get:1193 http://deb.debian.org/debian sid/main amd64 libcifpp-data all 7.0.9-1 [484 kB] Get:1194 http://deb.debian.org/debian sid/main amd64 libcifpp7 amd64 7.0.9-1 [1032 kB] Get:1195 http://deb.debian.org/debian sid/main amd64 cif-tools amd64 1.0.12-4 [2446 kB] Get:1196 http://deb.debian.org/debian sid/main amd64 python3-et-xmlfile all 2.0.0-1 [78.2 kB] Get:1197 http://deb.debian.org/debian sid/main amd64 python3-openpyxl all 3.1.5+dfsg-1 [166 kB] Get:1198 http://deb.debian.org/debian sid/main amd64 circlator all 1.5.6-13 [4605 kB] Get:1199 http://deb.debian.org/debian sid/main amd64 fonts-circos-symbols all 0.69.9+dfsg-2 [46.7 kB] Get:1200 http://deb.debian.org/debian sid/main amd64 fonts-cmu all 0.7.0-5 [4892 kB] Get:1201 http://deb.debian.org/debian sid/main amd64 libregexp-common-perl all 2024080801-1 [167 kB] Get:1202 http://deb.debian.org/debian sid/main amd64 libcarp-always-perl all 0.16-1 [9620 B] Get:1203 http://deb.debian.org/debian sid/main amd64 libconfig-general-perl all 2.67-1 [71.3 kB] Get:1204 http://deb.debian.org/debian sid/main amd64 libdata-dumper-simple-perl all 0.11-7 [12.5 kB] Get:1205 http://deb.debian.org/debian sid/main amd64 libgd-perl amd64 2.78-1+b3 [131 kB] Get:1206 http://deb.debian.org/debian sid/main amd64 libgetopt-simple-perl all 1.52-7 [15.5 kB] Get:1207 http://deb.debian.org/debian sid/main amd64 libmath-bezier-perl all 0.01-4 [7032 B] Get:1208 http://deb.debian.org/debian sid/main amd64 libmath-round-perl all 0.08-1 [9172 B] Get:1209 http://deb.debian.org/debian sid/main amd64 libparams-validate-perl amd64 1.31-2+b3 [63.4 kB] Get:1210 http://deb.debian.org/debian sid/main amd64 libreadonly-perl all 2.050-3 [23.1 kB] Get:1211 http://deb.debian.org/debian sid/main amd64 libset-intspan-perl all 1.19-3 [25.3 kB] Get:1212 http://deb.debian.org/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:1213 http://deb.debian.org/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:1214 http://deb.debian.org/debian sid/main amd64 liblist-allutils-perl all 0.19-1 [42.0 kB] Get:1215 http://deb.debian.org/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:1216 http://deb.debian.org/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:1217 http://deb.debian.org/debian sid/main amd64 libmath-vec-perl all 1.01-5 [17.1 kB] Get:1218 http://deb.debian.org/debian sid/main amd64 libspiffy-perl all 0.46-1 [25.7 kB] Get:1219 http://deb.debian.org/debian sid/main amd64 libio-all-perl all 0.87-2 [67.3 kB] Get:1220 http://deb.debian.org/debian sid/main amd64 libmath-vecstat-perl all 0.08-3 [8408 B] Get:1221 http://deb.debian.org/debian sid/main amd64 libgraphics-colornames-perl all 3.5.0-3.1 [29.0 kB] Get:1222 http://deb.debian.org/debian sid/main amd64 libgraphics-colorobject-perl all 0.5.0-10.1 [28.1 kB] Get:1223 http://deb.debian.org/debian sid/main amd64 libtext-format-perl all 0.63-1 [19.5 kB] Get:1224 http://deb.debian.org/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:1225 http://deb.debian.org/debian sid/main amd64 libnumber-format-perl all 1.76-1 [29.4 kB] Get:1226 http://deb.debian.org/debian sid/main amd64 libstatistics-basic-perl all 1.6611-3 [61.5 kB] Get:1227 http://deb.debian.org/debian sid/main amd64 libsvg-perl all 2.87-1 [64.3 kB] Get:1228 http://deb.debian.org/debian sid/main amd64 circos all 0.69.9+dfsg-2 [14.0 MB] Get:1229 http://deb.debian.org/debian sid/main amd64 circos-tools all 0.23-1 [18.7 MB] Get:1230 http://deb.debian.org/debian sid/main amd64 clearcut amd64 1.0.9+git20211013.b799afe-1 [285 kB] Get:1231 http://deb.debian.org/debian sid/main amd64 clonalframe amd64 1.2-11+b3 [52.7 kB] Get:1232 http://deb.debian.org/debian sid/main amd64 clonalframeml amd64 1.13-1 [106 kB] Get:1233 http://deb.debian.org/debian sid/main amd64 clonalorigin amd64 1.0-8+b1 [179 kB] Get:1234 http://deb.debian.org/debian sid/main amd64 libargtable2-0 amd64 13-3 [18.3 kB] Get:1235 http://deb.debian.org/debian sid/main amd64 clustalo amd64 1.2.4-8 [267 kB] Get:1236 http://deb.debian.org/debian sid/main amd64 clustalw amd64 2.1+lgpl-7 [282 kB] Get:1237 http://deb.debian.org/debian sid/main amd64 clustalx amd64 2.1+lgpl-9+b1 [456 kB] Get:1238 http://deb.debian.org/debian sid/main amd64 cython3 amd64 3.0.11+dfsg-2+b1 [2504 kB] Get:1239 http://deb.debian.org/debian sid/main amd64 python3-joblib all 1.4.2-3 [216 kB] Get:1240 http://deb.debian.org/debian sid/main amd64 python3-pomegranate amd64 0.15.0-1+b1 [3298 kB] Get:1241 http://deb.debian.org/debian sid/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get:1242 http://deb.debian.org/debian sid/main amd64 python3-sklearn-lib amd64 1.4.2+dfsg-8 [3980 kB] Get:1243 http://deb.debian.org/debian sid/main amd64 python3-sklearn all 1.4.2+dfsg-8 [2248 kB] Get:1244 http://deb.debian.org/debian sid/main amd64 r-bioc-biocgenerics all 0.52.0-2 [627 kB] Get:1245 http://deb.debian.org/debian sid/main amd64 r-bioc-dnacopy amd64 1.80.0-2 [498 kB] Get:1246 http://deb.debian.org/debian sid/main amd64 cnvkit all 0.9.12-1 [19.9 MB] Get:1247 http://deb.debian.org/debian sid/main amd64 codonw amd64 1.4.4-8 [141 kB] Get:1248 http://deb.debian.org/debian sid/main amd64 coinor-libcoinutils3v5 amd64 2.11.11+ds-5 [460 kB] Get:1249 http://deb.debian.org/debian sid/main amd64 coinor-libosi1v5 amd64 0.108.10+ds-2 [293 kB] Get:1250 http://deb.debian.org/debian sid/main amd64 coinor-libclp1 amd64 1.17.10+ds-1 [883 kB] Get:1251 http://deb.debian.org/debian sid/main amd64 coinor-libcgl1 amd64 0.60.9+ds-1 [426 kB] Get:1252 http://deb.debian.org/debian sid/main amd64 coinor-libcbc3.1 amd64 2.10.12+ds-1 [714 kB] Get:1253 http://deb.debian.org/debian sid/main amd64 coinor-cbc amd64 2.10.12+ds-1 [16.2 kB] Get:1254 http://deb.debian.org/debian sid/main amd64 comerr-dev amd64 2.1-1.47.2-1+b1 [56.0 kB] Get:1255 http://deb.debian.org/debian sid/main amd64 libmstoolkit82t64 amd64 82-7.2 [140 kB] Get:1256 http://deb.debian.org/debian sid/main amd64 comet-ms amd64 2019015+cleaned1-4.1 [836 kB] Get:1257 http://deb.debian.org/debian sid/main amd64 concavity amd64 0.1+dfsg.1-6 [244 kB] Get:1258 http://deb.debian.org/debian sid/main amd64 conservation-code all 20110309.0-8 [24.1 kB] Get:1259 http://deb.debian.org/debian sid/main amd64 ttf-bitstream-vera all 1.10-8.2 [223 kB] Get:1260 http://deb.debian.org/debian sid/main amd64 coot-data all 1.1.14+dfsg-1 [11.2 MB] Get:1261 http://deb.debian.org/debian sid/main amd64 libgraphene-1.0-0 amd64 1.10.8-5 [42.4 kB] Get:1262 http://deb.debian.org/debian sid/main amd64 gir1.2-graphene-1.0 amd64 1.10.8-5 [12.9 kB] Get:1263 http://deb.debian.org/debian sid/main amd64 liblzo2-2 amd64 2.10-3+b1 [55.1 kB] Get:1264 http://deb.debian.org/debian sid/main amd64 libcairo-script-interpreter2 amd64 1.18.4-1+b1 [59.3 kB] Get:1265 http://deb.debian.org/debian sid/main amd64 libgles2 amd64 1.7.0-1+b2 [17.3 kB] Get:1266 http://deb.debian.org/debian sid/main amd64 libgtk-4-common all 4.18.2+ds-1 [2786 kB] Get:1267 http://deb.debian.org/debian sid/main amd64 libgtk-4-1 amd64 4.18.2+ds-1 [3162 kB] Get:1268 http://deb.debian.org/debian sid/main amd64 gir1.2-gtk-4.0 amd64 4.18.2+ds-1 [214 kB] Get:1269 http://deb.debian.org/debian sid/main amd64 gir1.2-girepository-2.0 amd64 1.84.0-1 [39.7 kB] Get:1270 http://deb.debian.org/debian sid/main amd64 python3-gi amd64 3.50.0-4+b1 [236 kB] Get:1271 http://deb.debian.org/debian sid/main amd64 rdkit-data all 202409.6-2 [13.2 MB] Get:1272 http://deb.debian.org/debian sid/main amd64 libboost-python1.83.0 amd64 1.83.0-4.1+b2 [306 kB] Get:1273 http://deb.debian.org/debian sid/main amd64 libboost-numpy1.83.0 amd64 1.83.0-4.1+b2 [242 kB] Get:1274 http://deb.debian.org/debian sid/main amd64 libcoordgen3 amd64 3.0.2-1+b2 [225 kB] Get:1275 http://deb.debian.org/debian sid/main amd64 libinchi1.07 amd64 1.07.3+dfsg-1 [557 kB] Get:1276 http://deb.debian.org/debian sid/main amd64 libmaeparser1 amd64 1.3.1-1+b2 [94.0 kB] Get:1277 http://deb.debian.org/debian sid/main amd64 librdkit1t64 amd64 202409.6-2 [5524 kB] Get:1278 http://deb.debian.org/debian sid/main amd64 python3-rdkit amd64 202409.6-2 [4667 kB] Get:1279 http://deb.debian.org/debian sid/main amd64 refmac-dictionary all 5.41-3 [15.0 MB] Get:1280 http://deb.debian.org/debian sid/main amd64 libccp4-data all 8.0.0-4 [62.7 kB] Get:1281 http://deb.debian.org/debian sid/main amd64 libccp4c0t64 amd64 8.0.0-4 [89.9 kB] Get:1282 http://deb.debian.org/debian sid/main amd64 libmmdb2-0 amd64 2.0.22-1+b2 [342 kB] Get:1283 http://deb.debian.org/debian sid/main amd64 sfftw2 amd64 2.1.5-7+b1 [254 kB] Get:1284 http://deb.debian.org/debian sid/main amd64 libclipper2 amd64 2.1.20201109-2+b3 [1183 kB] Get:1285 http://deb.debian.org/debian sid/main amd64 libssm2 amd64 1.4.0-2+b3 [84.3 kB] Get:1286 http://deb.debian.org/debian sid/main amd64 libcootapi1.1 amd64 1.1.14+dfsg-1 [4295 kB] Get:1287 http://deb.debian.org/debian sid/main amd64 libogg0 amd64 1.3.5-3+b2 [23.8 kB] Get:1288 http://deb.debian.org/debian sid/main amd64 libvorbis0a amd64 1.3.7-2+b1 [91.1 kB] Get:1289 http://deb.debian.org/debian sid/main amd64 libvorbisfile3 amd64 1.3.7-2+b1 [21.5 kB] Get:1290 http://deb.debian.org/debian sid/main amd64 coot amd64 1.1.14+dfsg-1 [9279 kB] Get:1291 http://deb.debian.org/debian sid/main amd64 covtobed amd64 1.3.5+dfsg-2 [51.0 kB] Get:1292 http://deb.debian.org/debian sid/main amd64 libgkarrays1t64 amd64 2.1.0+dfsg-4.2 [57.5 kB] Get:1293 http://deb.debian.org/debian sid/main amd64 libgzstream0 amd64 1.5+git20171107.9a20658-3 [7032 B] Get:1294 http://deb.debian.org/debian sid/main amd64 crac amd64 2.5.2+dfsg-6 [464 kB] Get:1295 http://deb.debian.org/debian sid/main amd64 python3-csb all 1.2.5+dfsg-10 [2172 kB] Get:1296 http://deb.debian.org/debian sid/main amd64 csb all 1.2.5+dfsg-10 [12.5 kB] Get:1297 http://deb.debian.org/debian sid/main amd64 libfftw3-single3 amd64 3.3.10-2+b1 [809 kB] Get:1298 http://deb.debian.org/debian sid/main amd64 ctffind amd64 4.1.14-3 [353 kB] Get:1299 http://deb.debian.org/debian sid/main amd64 curl amd64 8.13.0~rc2-1 [268 kB] Get:1300 http://deb.debian.org/debian sid/main amd64 python3-dnaio amd64 1.2.3-1+b1 [84.6 kB] Get:1301 http://deb.debian.org/debian sid/main amd64 python3-cutadapt amd64 4.7-2+b3 [204 kB] Get:1302 http://deb.debian.org/debian sid/main amd64 cutadapt all 4.7-2 [25.1 kB] Get:1303 http://deb.debian.org/debian sid/main amd64 python3-cigar all 0.1.3-2 [5468 B] Get:1304 http://deb.debian.org/debian sid/main amd64 python3-vcf amd64 0.6.8+git20170215.476169c-11+b1 [53.6 kB] Get:1305 http://deb.debian.org/debian sid/main amd64 cutesv all 2.1.1-1 [37.4 kB] Get:1306 http://deb.debian.org/debian sid/main amd64 python3-ruamel.yaml.clib amd64 0.2.12+ds-1+b1 [135 kB] Get:1307 http://deb.debian.org/debian sid/main amd64 python3-ruamel.yaml all 0.18.10+ds-1 [147 kB] Get:1308 http://deb.debian.org/debian sid/main amd64 python3-msgpack amd64 1.0.3-3+b4 [84.5 kB] Get:1309 http://deb.debian.org/debian sid/main amd64 python3-cachecontrol all 0.14.2-1 [18.3 kB] Get:1310 http://deb.debian.org/debian sid/main amd64 python3-mistune all 3.0.2-2 [33.2 kB] Get:1311 http://deb.debian.org/debian sid/main amd64 python3-rdflib all 7.1.1-2 [472 kB] Get:1312 http://deb.debian.org/debian sid/main amd64 python3-filelock all 3.17.0-1 [12.7 kB] Get:1313 http://deb.debian.org/debian sid/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get:1314 http://deb.debian.org/debian sid/main amd64 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get:1315 http://deb.debian.org/debian sid/main amd64 python3-schema-salad amd64 8.8.20241206093842-2+b1 [1175 kB] Get:1316 http://deb.debian.org/debian sid/main amd64 cwl-upgrader all 1.2.12-1 [15.7 kB] Get:1317 http://deb.debian.org/debian sid/main amd64 python3-argcomplete all 3.5.3-1 [40.4 kB] Get:1318 http://deb.debian.org/debian sid/main amd64 python3-humanfriendly all 10.0-6 [85.6 kB] Get:1319 http://deb.debian.org/debian sid/main amd64 python3-coloredlogs all 15.0.1-1 [47.4 kB] Get:1320 http://deb.debian.org/debian sid/main amd64 python3-cwl-utils all 0.37-1 [137 kB] Get:1321 http://deb.debian.org/debian sid/main amd64 python3-prov all 2.0.1-1 [95.1 kB] Get:1322 http://deb.debian.org/debian sid/main amd64 python3-psutil amd64 7.0.0-1 [220 kB] Get:1323 http://deb.debian.org/debian sid/main amd64 python3-pydot all 2.0.0-3 [32.6 kB] Get:1324 http://deb.debian.org/debian sid/main amd64 python3-mdurl all 0.1.2-1 [9444 B] Get:1325 http://deb.debian.org/debian sid/main amd64 python3-markdown-it all 3.0.0-2 [62.5 kB] Get:1326 http://deb.debian.org/debian sid/main amd64 python3-rich all 13.9.4-1 [203 kB] Get:1327 http://deb.debian.org/debian sid/main amd64 python3-rich-argparse all 1.6.0-2 [16.9 kB] Get:1328 http://deb.debian.org/debian sid/main amd64 python3-spython all 0.3.13-2 [55.2 kB] Get:1329 http://deb.debian.org/debian sid/main amd64 python3-arcp all 0.2.1-7 [13.6 kB] Get:1330 http://deb.debian.org/debian sid/main amd64 cwltool all 3.1.20250110105449-3 [514 kB] Get:1331 http://deb.debian.org/debian sid/main amd64 daligner amd64 1.0+git20240119.335105d-3 [242 kB] Get:1332 http://deb.debian.org/debian sid/main amd64 damapper amd64 0.0+git20240314.b025cf9-1 [112 kB] Get:1333 http://deb.debian.org/debian sid/main amd64 dascrubber amd64 1.1-4 [168 kB] Get:1334 http://deb.debian.org/debian sid/main amd64 datamash amd64 1.8-1 [350 kB] Get:1335 http://deb.debian.org/debian sid/main amd64 dawg amd64 1.2-4+b1 [77.5 kB] Get:1336 http://deb.debian.org/debian sid/main amd64 dazzdb amd64 1.0+git20250217.a3eefd4-1 [226 kB] Get:1337 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [69.3 kB] Get:1338 http://deb.debian.org/debian sid/main amd64 liblzf1 amd64 3.6-4+b3 [10.1 kB] Get:1339 http://deb.debian.org/debian sid/main amd64 python3-h5py-serial amd64 3.13.0-1+b1 [1065 kB] Get:1340 http://deb.debian.org/debian sid/main amd64 python3-h5py all 3.13.0-1 [15.0 kB] Get:1341 http://deb.debian.org/debian sid/main amd64 python3-biom-format amd64 2.1.16-1+b5 [151 kB] Get:1342 http://deb.debian.org/debian sid/main amd64 libssw0 amd64 1.1-15+b2 [21.8 kB] Get:1343 http://deb.debian.org/debian sid/main amd64 python3-natsort all 8.0.2-2 [39.0 kB] Get:1344 http://deb.debian.org/debian sid/main amd64 python3-patsy all 1.0.1-1 [172 kB] Get:1345 http://deb.debian.org/debian sid/main amd64 python3-statsmodels-lib amd64 0.14.4+dfsg-1+b4 [1599 kB] Get:1346 http://deb.debian.org/debian sid/main amd64 python3-statsmodels all 0.14.4+dfsg-1 [4825 kB] Get:1347 http://deb.debian.org/debian sid/main amd64 python3-hdmedians amd64 0.14.2-6+b1 [121 kB] Get:1348 http://deb.debian.org/debian sid/main amd64 python3-skbio amd64 0.6.2-4+b2 [1398 kB] Get:1349 http://deb.debian.org/debian sid/main amd64 deblur all 1.1.1-4 [1971 kB] Get:1350 http://deb.debian.org/debian sid/main amd64 openjdk-21-jdk amd64 21.0.7~7ea-1 [3573 kB] Get:1351 http://deb.debian.org/debian sid/main amd64 default-jdk amd64 2:1.21-76 [1076 B] Get:1352 http://deb.debian.org/debian sid/main amd64 delly amd64 1.1.8-1+b2 [403 kB] Get:1353 http://deb.debian.org/debian sid/main amd64 libnewuoa0 amd64 0.1.2-1 [18.6 kB] Get:1354 http://deb.debian.org/debian sid/main amd64 libpdb-redo3 amd64 3.2.1-1 [330 kB] Get:1355 http://deb.debian.org/debian sid/main amd64 libzeep5.1 amd64 5.1.8-1+b1 [619 kB] Get:1356 http://deb.debian.org/debian sid/main amd64 density-fitness amd64 1.1.2-1 [495 kB] Get:1357 http://deb.debian.org/debian sid/main amd64 dextractor amd64 1.0-6+b2 [49.9 kB] Get:1358 http://deb.debian.org/debian sid/main amd64 dialign amd64 2.2.1-13 [138 kB] Get:1359 http://deb.debian.org/debian sid/main amd64 dialign-tx-data all 1.0.2-15 [862 kB] Get:1360 http://deb.debian.org/debian sid/main amd64 dialign-tx amd64 1.0.2-15 [87.6 kB] Get:1361 http://deb.debian.org/debian sid/main amd64 libcppunit-1.15-0 amd64 1.15.1-4+b2 [151 kB] Get:1362 http://deb.debian.org/debian sid/main amd64 gatb-core amd64 1.4.2+dfsg-13+b4 [3313 kB] Get:1363 http://deb.debian.org/debian sid/main amd64 discosnp amd64 1:2.6.2-4+b2 [1458 kB] Get:1364 http://deb.debian.org/debian sid/main amd64 disulfinder-data all 1.2.11-12 [1127 kB] Get:1365 http://deb.debian.org/debian sid/main amd64 disulfinder amd64 1.2.11-12 [239 kB] Get:1366 http://deb.debian.org/debian sid/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-1 [135 kB] Get:1367 http://deb.debian.org/debian sid/main amd64 dmsetup amd64 2:1.02.205-1 [82.4 kB] Get:1368 http://deb.debian.org/debian sid/main amd64 dnaclust amd64 3-7+b3 [115 kB] Get:1369 http://deb.debian.org/debian sid/main amd64 dnarrange all 1.5.3-1.1 [18.6 kB] Get:1370 http://deb.debian.org/debian sid/main amd64 sgml-data all 2.0.11+nmu1 [179 kB] Get:1371 http://deb.debian.org/debian sid/main amd64 docbook-xml all 4.5-13 [77.4 kB] Get:1372 http://deb.debian.org/debian sid/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get:1373 http://deb.debian.org/debian sid/main amd64 dotter amd64 4.44.1+dfsg-7.1+b3 [612 kB] Get:1374 http://deb.debian.org/debian sid/main amd64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB] Get:1375 http://deb.debian.org/debian sid/main amd64 libciftools-java all 6.0.0-1 [2211 kB] Get:1376 http://deb.debian.org/debian sid/main amd64 libitext5-java all 5.5.13.3-4 [2667 kB] Get:1377 http://deb.debian.org/debian sid/main amd64 libjackson2-annotations-java all 2.14.0-1 [68.8 kB] Get:1378 http://deb.debian.org/debian sid/main amd64 libjackson2-core-java all 2.14.1-1 [447 kB] Get:1379 http://deb.debian.org/debian sid/main amd64 libjackson2-databind-java all 2.14.0+ds-1 [1532 kB] Get:1380 http://deb.debian.org/debian sid/main amd64 libactivation-java all 1.2.0-2 [84.7 kB] Get:1381 http://deb.debian.org/debian sid/main amd64 libjaxb-api-java all 2.3.1-1 [119 kB] Get:1382 http://deb.debian.org/debian sid/main amd64 libargs4j-java all 2.33-2 [138 kB] Get:1383 http://deb.debian.org/debian sid/main amd64 libdom4j-java all 2.1.4-1 [312 kB] Get:1384 http://deb.debian.org/debian sid/main amd64 libmaven-shared-utils-java all 3.4.2-1 [137 kB] Get:1385 http://deb.debian.org/debian sid/main amd64 libaopalliance-java all 20070526-7 [8572 B] Get:1386 http://deb.debian.org/debian sid/main amd64 libguice-java all 5.1.0-1 [932 kB] Get:1387 http://deb.debian.org/debian sid/main amd64 libmaven-parent-java all 43-2 [6252 B] Get:1388 http://deb.debian.org/debian sid/main amd64 libplexus-utils2-java all 3.4.2-1 [258 kB] Get:1389 http://deb.debian.org/debian sid/main amd64 libwagon-provider-api-java all 3.5.3-1 [48.2 kB] Get:1390 http://deb.debian.org/debian sid/main amd64 libmaven-resolver-java all 1.9.22-1 [729 kB] Get:1391 http://deb.debian.org/debian sid/main amd64 libplexus-cipher-java all 2.0-1 [14.9 kB] Get:1392 http://deb.debian.org/debian sid/main amd64 libplexus-classworlds-java all 2.7.0-1 [50.6 kB] Get:1393 http://deb.debian.org/debian sid/main amd64 libplexus-component-annotations-java all 2.1.1-1 [7660 B] Get:1394 http://deb.debian.org/debian sid/main amd64 libplexus-interpolation-java all 1.27-1 [76.8 kB] Get:1395 http://deb.debian.org/debian sid/main amd64 libplexus-sec-dispatcher-java all 2.0-3 [28.3 kB] Get:1396 http://deb.debian.org/debian sid/main amd64 libgeronimo-interceptor-3.0-spec-java all 1.0.1-5 [8444 B] Get:1397 http://deb.debian.org/debian sid/main amd64 libcdi-api-java all 1.2-4 [55.3 kB] Get:1398 http://deb.debian.org/debian sid/main amd64 libsisu-inject-java all 0.3.5-1 [352 kB] Get:1399 http://deb.debian.org/debian sid/main amd64 libsisu-plexus-java all 0.3.5-1 [183 kB] Get:1400 http://deb.debian.org/debian sid/main amd64 libmaven3-core-java all 3.9.9-1 [1661 kB] Get:1401 http://deb.debian.org/debian sid/main amd64 libmaven-shared-io-java all 3.0.0-4 [33.2 kB] Get:1402 http://deb.debian.org/debian sid/main amd64 libmaven-file-management-java all 3.0.0-2 [35.1 kB] Get:1403 http://deb.debian.org/debian sid/main amd64 libplexus-io-java all 3.3.1-2 [65.3 kB] Get:1404 http://deb.debian.org/debian sid/main amd64 libxz-java all 1.9-1 [143 kB] Get:1405 http://deb.debian.org/debian sid/main amd64 libplexus-archiver-java all 4.6.1-1 [187 kB] Get:1406 http://deb.debian.org/debian sid/main amd64 libjsoup-java all 1.15.3-1 [431 kB] Get:1407 http://deb.debian.org/debian sid/main amd64 libwagon-http-java all 3.5.3-1 [49.5 kB] Get:1408 http://deb.debian.org/debian sid/main amd64 libistack-commons-java all 3.0.6-5 [145 kB] Get:1409 http://deb.debian.org/debian sid/main amd64 libcodemodel-java all 2.6+jaxb2.3.0.1-11 [164 kB] Get:1410 http://deb.debian.org/debian sid/main amd64 librelaxng-datatype-java all 1.0+ds1-4 [11.8 kB] Get:1411 http://deb.debian.org/debian sid/main amd64 librngom-java all 2.3.0.1-11 [292 kB] Get:1412 http://deb.debian.org/debian sid/main amd64 libxsom-java all 2.3.0.1-11 [401 kB] Get:1413 http://deb.debian.org/debian sid/main amd64 libtxw2-java all 2.3.0.1-11 [134 kB] Get:1414 http://deb.debian.org/debian sid/main amd64 libdtd-parser-java all 1.2-1 [64.9 kB] Get:1415 http://deb.debian.org/debian sid/main amd64 libstax-ex-java all 1.7.8-3 [40.9 kB] Get:1416 http://deb.debian.org/debian sid/main amd64 libstreambuffer-java all 1.5.4-1.1 [74.0 kB] Get:1417 http://deb.debian.org/debian sid/main amd64 libfastinfoset-java all 1.2.12-4 [347 kB] Get:1418 http://deb.debian.org/debian sid/main amd64 libjaxb-java all 2.3.0.1-11 [1980 kB] Get:1419 http://deb.debian.org/debian sid/main amd64 libjni-inchi-jni amd64 0.8+dfsg-8 [9188 B] Get:1420 http://deb.debian.org/debian sid/main amd64 libcommons-exec-java all 1.3-2 [48.1 kB] Get:1421 http://deb.debian.org/debian sid/main amd64 libexec-maven-plugin-java all 3.1.0-2 [66.7 kB] Get:1422 http://deb.debian.org/debian sid/main amd64 libmaven-shared-incremental-java all 1.1-6 [9916 B] Get:1423 http://deb.debian.org/debian sid/main amd64 libxbean-reflect-java all 4.5-9 [132 kB] Get:1424 http://deb.debian.org/debian sid/main amd64 libplexus-container-default-java all 2.1.1-1 [193 kB] Get:1425 http://deb.debian.org/debian sid/main amd64 libplexus-compiler-java all 2.13.0-1 [99.5 kB] Get:1426 http://deb.debian.org/debian sid/main amd64 libqdox2-java all 2.0.3-1 [296 kB] Get:1427 http://deb.debian.org/debian sid/main amd64 libplexus-languages-java all 1.1.1-2 [47.3 kB] Get:1428 http://deb.debian.org/debian sid/main amd64 libmaven-compiler-plugin-java all 3.13.0-1 [78.8 kB] Get:1429 http://deb.debian.org/debian sid/main amd64 libjni-inchi-java all 0.8+dfsg-8 [33.6 kB] Get:1430 http://deb.debian.org/debian sid/main amd64 libnaga-java all 3.0+svn80-5 [43.5 kB] Get:1431 http://deb.debian.org/debian sid/main amd64 libjmol-java all 16.2.33+dfsg-1 [10.4 MB] Get:1432 http://deb.debian.org/debian sid/main amd64 libjson-simple-java all 2.3.0-2 [61.7 kB] Get:1433 http://deb.debian.org/debian sid/main amd64 libmaven-archiver-java all 3.6.2-1 [26.1 kB] Get:1434 http://deb.debian.org/debian sid/main amd64 libmaven-jar-plugin-java all 3.3.0-2 [24.0 kB] Get:1435 http://deb.debian.org/debian sid/main amd64 libmsgpack-java all 0.9.6-1 [161 kB] Get:1436 http://deb.debian.org/debian sid/main amd64 libmmtf-java all 1.0.11-1 [187 kB] Get:1437 http://deb.debian.org/debian sid/main amd64 libvecmath-java all 1.5.2-7 [97.0 kB] Get:1438 http://deb.debian.org/debian sid/main amd64 libbiojava6-java all 6.1.0+dfsg-5 [5359 kB] Get:1439 http://deb.debian.org/debian sid/main amd64 libla4j-java all 0.6.0-4 [228 kB] Get:1440 http://deb.debian.org/debian sid/main amd64 libyaml-snake-java all 1.33-2 [321 kB] Get:1441 http://deb.debian.org/debian sid/main amd64 picard-tools all 3.3.0+dfsg-2 [311 kB] Get:1442 http://deb.debian.org/debian sid/main amd64 drop-seq-tools all 3.0.2+dfsg-1 [568 kB] Get:1443 http://deb.debian.org/debian sid/main amd64 dssp amd64 4.4.10-1 [697 kB] Get:1444 http://deb.debian.org/debian sid/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-6 [157 kB] Get:1445 http://deb.debian.org/debian sid/main amd64 tex-common all 6.19 [29.4 kB] Get:1446 http://deb.debian.org/debian sid/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-6 [49.3 kB] Get:1447 http://deb.debian.org/debian sid/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-6 [62.9 kB] Get:1448 http://deb.debian.org/debian sid/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-6 [114 kB] Get:1449 http://deb.debian.org/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:1450 http://deb.debian.org/debian sid/main amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB] Get:1451 http://deb.debian.org/debian sid/main amd64 libpotrace0 amd64 1.16-2+b2 [25.6 kB] Get:1452 http://deb.debian.org/debian sid/main amd64 libteckit0 amd64 2.5.12+ds1-1+b1 [341 kB] Get:1453 http://deb.debian.org/debian sid/main amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [59.0 kB] Get:1454 http://deb.debian.org/debian sid/main amd64 texlive-binaries amd64 2024.20240313.70630+ds-6 [8446 kB] Get:1455 http://deb.debian.org/debian sid/main amd64 texlive-base all 2024.20250309-1 [23.1 MB] Get:1456 http://deb.debian.org/debian sid/main amd64 libgs-common all 10.05.0~dfsg-1 [148 kB] Get:1457 http://deb.debian.org/debian sid/main amd64 libgs10-common all 10.05.0~dfsg-1 [476 kB] Get:1458 http://deb.debian.org/debian sid/main amd64 libidn12 amd64 1.42-3 [81.0 kB] Get:1459 http://deb.debian.org/debian sid/main amd64 libijs-0.35 amd64 0.35-15.2 [14.8 kB] Get:1460 http://deb.debian.org/debian sid/main amd64 libjbig2dec0 amd64 0.20-1+b3 [65.1 kB] Get:1461 http://deb.debian.org/debian sid/main amd64 libgs10 amd64 10.05.0~dfsg-1 [2567 kB] Get:1462 http://deb.debian.org/debian sid/main amd64 ghostscript amd64 10.05.0~dfsg-1 [49.9 kB] Get:1463 http://deb.debian.org/debian sid/main amd64 dvipng amd64 1.18-1 [84.9 kB] Get:1464 http://deb.debian.org/debian sid/main amd64 libwoff1 amd64 1.0.2-2+b2 [44.3 kB] Get:1465 http://deb.debian.org/debian sid/main amd64 dvisvgm amd64 3.4.4+ds-1 [1137 kB] Get:1466 http://deb.debian.org/debian sid/main amd64 dwgsim amd64 0.1.14-3 [44.1 kB] Get:1467 http://deb.debian.org/debian sid/main amd64 e-mem amd64 1.0.1-5 [34.8 kB] Get:1468 http://deb.debian.org/debian sid/main amd64 r-cran-cluster amd64 2.1.8.1-1 [585 kB] Get:1469 http://deb.debian.org/debian sid/main amd64 r-cran-survival amd64 3.8-3-1 [8265 kB] Get:1470 http://deb.debian.org/debian sid/main amd64 r-cran-rpart amd64 4.1.24-1 [689 kB] Get:1471 http://deb.debian.org/debian sid/main amd64 r-cran-nnet amd64 7.3-20-1 [112 kB] Get:1472 http://deb.debian.org/debian sid/main amd64 r-cran-foreign amd64 0.8.88-1 [253 kB] Get:1473 http://deb.debian.org/debian sid/main amd64 r-cran-gridextra all 2.3-3 [1024 kB] Get:1474 http://deb.debian.org/debian sid/main amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2105 kB] Get:1475 http://deb.debian.org/debian sid/main amd64 r-cran-stringi amd64 1.8.4-1+b1 [896 kB] Get:1476 http://deb.debian.org/debian sid/main amd64 r-cran-stringr all 1.5.1-1 [296 kB] Get:1477 http://deb.debian.org/debian sid/main amd64 r-cran-evaluate all 1.0.3-1 [114 kB] Get:1478 http://deb.debian.org/debian sid/main amd64 r-cran-xfun amd64 0.51+dfsg-1 [575 kB] Get:1479 http://deb.debian.org/debian sid/main amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [397 kB] Get:1480 http://deb.debian.org/debian sid/main amd64 r-cran-highr all 0.11+dfsg-1 [38.3 kB] Get:1481 http://deb.debian.org/debian sid/main amd64 r-cran-yaml amd64 2.3.10-1 [108 kB] Get:1482 http://deb.debian.org/debian sid/main amd64 r-cran-knitr all 1.50+dfsg-1 [843 kB] Get:1483 http://deb.debian.org/debian sid/main amd64 r-cran-backports amd64 1.5.0-2 [121 kB] Get:1484 http://deb.debian.org/debian sid/main amd64 r-cran-checkmate amd64 2.3.2-1 [705 kB] Get:1485 http://deb.debian.org/debian sid/main amd64 r-cran-base64enc amd64 0.1-3-3 [27.9 kB] Get:1486 http://deb.debian.org/debian sid/main amd64 r-cran-digest amd64 0.6.37-1 [206 kB] Get:1487 http://deb.debian.org/debian sid/main amd64 r-cran-fastmap amd64 1.2.0-1 [72.2 kB] Get:1488 http://deb.debian.org/debian sid/main amd64 r-cran-htmltools amd64 0.5.8.1-1 [378 kB] Get:1489 http://deb.debian.org/debian sid/main amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [445 kB] Get:1490 http://deb.debian.org/debian sid/main amd64 r-cran-cachem amd64 1.1.0-1 [73.9 kB] Get:1491 http://deb.debian.org/debian sid/main amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.1 kB] Get:1492 http://deb.debian.org/debian sid/main amd64 r-cran-memoise all 2.0.1-1 [53.8 kB] Get:1493 http://deb.debian.org/debian sid/main amd64 r-cran-mime amd64 0.12-2 [35.6 kB] Get:1494 http://deb.debian.org/debian sid/main amd64 r-cran-fs amd64 1.6.5+dfsg-1 [248 kB] Get:1495 http://deb.debian.org/debian sid/main amd64 r-cran-rappdirs amd64 0.3.3-1 [47.4 kB] Get:1496 http://deb.debian.org/debian sid/main amd64 r-cran-sass amd64 0.4.9+dfsg-1 [965 kB] Get:1497 http://deb.debian.org/debian sid/main amd64 node-bootstrap-sass all 3.4.3-2 [186 kB] Get:1498 http://deb.debian.org/debian sid/main amd64 javascript-common all 12 [5236 B] Get:1499 http://deb.debian.org/debian sid/main amd64 libjs-popper.js all 1.16.1+ds-6 [52.4 kB] Get:1500 http://deb.debian.org/debian sid/main amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [517 kB] Get:1501 http://deb.debian.org/debian sid/main amd64 r-cran-bslib all 0.9.0+dfsg-1 [4664 kB] Get:1502 http://deb.debian.org/debian sid/main amd64 r-cran-fontawesome all 0.5.3-1 [1311 kB] Get:1503 http://deb.debian.org/debian sid/main amd64 r-cran-tinytex all 0.56-1 [149 kB] Get:1504 http://deb.debian.org/debian sid/main amd64 libjs-modernizr all 3.13.0-0.1 [191 kB] Get:1505 http://deb.debian.org/debian sid/main amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [41.7 kB] Get:1506 http://deb.debian.org/debian sid/main amd64 pandoc-data all 3.1.11.1-3 [459 kB] Get:1507 http://deb.debian.org/debian sid/main amd64 pandoc amd64 3.1.11.1+ds-2 [26.4 MB] Get:1508 http://deb.debian.org/debian sid/main amd64 r-cran-later amd64 1.4.1+dfsg-1 [141 kB] Get:1509 http://deb.debian.org/debian sid/main amd64 r-cran-promises amd64 1.3.2+dfsg-1 [288 kB] Get:1510 http://deb.debian.org/debian sid/main amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [493 kB] Get:1511 http://deb.debian.org/debian sid/main amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] Get:1512 http://deb.debian.org/debian sid/main amd64 r-cran-sourcetools amd64 0.1.7-1-1 [45.9 kB] Get:1513 http://deb.debian.org/debian sid/main amd64 r-cran-crayon all 1.5.3-1 [165 kB] Get:1514 http://deb.debian.org/debian sid/main amd64 r-cran-commonmark amd64 1.9.5-1 [123 kB] Get:1515 http://deb.debian.org/debian sid/main amd64 libjs-json all 0~20221030+~1.0.8-1 [20.0 kB] Get:1516 http://deb.debian.org/debian sid/main amd64 libjs-es5-shim all 4.6.7-2 [47.4 kB] Get:1517 http://deb.debian.org/debian sid/main amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [32.1 kB] Get:1518 http://deb.debian.org/debian sid/main amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.2 kB] Get:1519 http://deb.debian.org/debian sid/main amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3672 B] Get:1520 http://deb.debian.org/debian sid/main amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [52.1 kB] Get:1521 http://deb.debian.org/debian sid/main amd64 libjs-d3 all 3.5.17-4 [132 kB] Get:1522 http://deb.debian.org/debian sid/main amd64 node-html5shiv all 3.7.3+dfsg-5 [13.2 kB] Get:1523 http://deb.debian.org/debian sid/main amd64 r-cran-shiny all 1.10.0+dfsg-2 [3139 kB] Get:1524 http://deb.debian.org/debian sid/main amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1473 kB] Get:1525 http://deb.debian.org/debian sid/main amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] Get:1526 http://deb.debian.org/debian sid/main amd64 r-cran-rstudioapi all 0.17.1-1 [307 kB] Get:1527 http://deb.debian.org/debian sid/main amd64 r-cran-generics all 0.1.3-1 [81.4 kB] Get:1528 http://deb.debian.org/debian sid/main amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [223 kB] Get:1529 http://deb.debian.org/debian sid/main amd64 r-cran-dplyr amd64 1.1.4-4 [1543 kB] Get:1530 http://deb.debian.org/debian sid/main amd64 r-cran-purrr amd64 1.0.4-1 [556 kB] Get:1531 http://deb.debian.org/debian sid/main amd64 r-cran-cpp11 all 0.5.2-1 [226 kB] Get:1532 http://deb.debian.org/debian sid/main amd64 r-cran-tidyr amd64 1.3.1-1 [1163 kB] Get:1533 http://deb.debian.org/debian sid/main amd64 r-cran-htmltable all 2.4.3-1 [389 kB] Get:1534 http://deb.debian.org/debian sid/main amd64 r-cran-viridis all 0.6.5-1 [2991 kB] Get:1535 http://deb.debian.org/debian sid/main amd64 r-cran-formula all 1.2-5-1 [158 kB] Get:1536 http://deb.debian.org/debian sid/main amd64 r-cran-chron amd64 2.3-62-1 [196 kB] Get:1537 http://deb.debian.org/debian sid/main amd64 r-cran-png amd64 0.1-8-1+b1 [41.5 kB] Get:1538 http://deb.debian.org/debian sid/main amd64 r-cran-jpeg amd64 0.1-10-1 [30.8 kB] Get:1539 http://deb.debian.org/debian sid/main amd64 r-cran-deldir amd64 2.0-4-1 [286 kB] Get:1540 http://deb.debian.org/debian sid/main amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1411 kB] Get:1541 http://deb.debian.org/debian sid/main amd64 r-cran-interp amd64 1.1-6-1 [1445 kB] Get:1542 http://deb.debian.org/debian sid/main amd64 r-cran-latticeextra all 0.6-30-1 [2194 kB] Get:1543 http://deb.debian.org/debian sid/main amd64 r-cran-acepack amd64 1.6.1-1 [83.9 kB] Get:1544 http://deb.debian.org/debian sid/main amd64 r-cran-hmisc amd64 5.2-3-1 [3603 kB] Get:1545 http://deb.debian.org/debian sid/main amd64 ea-utils amd64 1.1.2+dfsg-9+b3 [246 kB] Get:1546 http://deb.debian.org/debian sid/main amd64 ecopcr amd64 1.0.1+dfsg-5 [58.6 kB] Get:1547 http://deb.debian.org/debian sid/main amd64 edtsurf amd64 0.2009-10 [155 kB] Get:1548 http://deb.debian.org/debian sid/main amd64 libtmglib3 amd64 3.12.1-2 [125 kB] Get:1549 http://deb.debian.org/debian sid/main amd64 liblapacke amd64 3.12.1-2 [381 kB] Get:1550 http://deb.debian.org/debian sid/main amd64 eigensoft amd64 8.0.0+dfsg-2+b1 [519 kB] Get:1551 http://deb.debian.org/debian sid/main amd64 elph amd64 1.0.1-5 [52.3 kB] Get:1552 http://deb.debian.org/debian sid/main amd64 embassy-domainatrix amd64 0.1.660-5 [61.8 kB] Get:1553 http://deb.debian.org/debian sid/main amd64 embassy-domalign amd64 0.1.660-5 [67.5 kB] Get:1554 http://deb.debian.org/debian sid/main amd64 embassy-domsearch amd64 1:0.1.660-4 [61.1 kB] Get:1555 http://deb.debian.org/debian sid/main amd64 emmax amd64 0~beta.20100307-5 [27.7 kB] Get:1556 http://deb.debian.org/debian sid/main amd64 enchant-2 amd64 2.8.2+dfsg1-3 [20.9 kB] Get:1557 http://deb.debian.org/debian sid/main amd64 estscan amd64 3.0.3-6 [53.7 kB] Get:1558 http://deb.debian.org/debian sid/main amd64 mpi-default-bin amd64 1.18 [2576 B] Get:1559 http://deb.debian.org/debian sid/main amd64 examl amd64 3.0.22-6+b2 [960 kB] Get:1560 http://deb.debian.org/debian sid/main amd64 exonerate amd64 2.4.0-5+b1 [1963 kB] Get:1561 http://deb.debian.org/debian sid/main amd64 libfakeroot amd64 1.37.1-1 [29.5 kB] Get:1562 http://deb.debian.org/debian sid/main amd64 fakeroot amd64 1.37.1-1 [75.7 kB] Get:1563 http://deb.debian.org/debian sid/main amd64 fasta3 amd64 36.3.8i.14-Nov-2020-3 [978 kB] Get:1564 http://deb.debian.org/debian sid/main amd64 libdisorder0 amd64 0.0.2+git20130809.8062ee1-4+b2 [4908 B] Get:1565 http://deb.debian.org/debian sid/main amd64 libfastahack0 amd64 1.0.0+dfsg-11+b2 [26.4 kB] Get:1566 http://deb.debian.org/debian sid/main amd64 fastahack amd64 1.0.0+dfsg-11+b2 [12.7 kB] Get:1567 http://deb.debian.org/debian sid/main amd64 fastani amd64 1.33-3+b1 [113 kB] Get:1568 http://deb.debian.org/debian sid/main amd64 fastdnaml amd64 1.2.2-18 [60.2 kB] Get:1569 http://deb.debian.org/debian sid/main amd64 fastlink amd64 4.1P-fix100+dfsg-5 [256 kB] Get:1570 http://deb.debian.org/debian sid/main amd64 fastml amd64 3.11-4 [948 kB] Get:1571 http://deb.debian.org/debian sid/main amd64 libisal2 amd64 2.31.1-1.1 [114 kB] Get:1572 http://deb.debian.org/debian sid/main amd64 fastp amd64 0.24.0+dfsg-1 [219 kB] Get:1573 http://deb.debian.org/debian sid/main amd64 fastq-pair amd64 1.0-3 [7308 B] Get:1574 http://deb.debian.org/debian sid/main amd64 libjbzip2-java all 0.9.1-8 [42.7 kB] Get:1575 http://deb.debian.org/debian sid/main amd64 libfindbin-libs-perl all 3.0.2-1 [29.7 kB] Get:1576 http://deb.debian.org/debian sid/main amd64 fastqc all 0.12.1+dfsg-4 [398 kB] Get:1577 http://deb.debian.org/debian sid/main amd64 r-mathlib amd64 4.4.3-1+b1 [2617 kB] Get:1578 http://deb.debian.org/debian sid/main amd64 fastqtl amd64 2.184+v7+dfsg-4+b3 [243 kB] Get:1579 http://deb.debian.org/debian sid/main amd64 figtree all 1.4.4-6 [884 kB] Get:1580 http://deb.debian.org/debian sid/main amd64 filtlong amd64 0.2.1-4 [2938 kB] Get:1581 http://deb.debian.org/debian sid/main amd64 fitgcp all 0.0.20150429-5 [3676 kB] Get:1582 http://deb.debian.org/debian sid/main amd64 flash amd64 1.2.11-2 [124 kB] Get:1583 http://deb.debian.org/debian sid/main amd64 libtbbbind-2-5 amd64 2022.0.0-2 [14.6 kB] Get:1584 http://deb.debian.org/debian sid/main amd64 libtbbmalloc2 amd64 2022.0.0-2 [49.3 kB] Get:1585 http://deb.debian.org/debian sid/main amd64 libtbb12 amd64 2022.0.0-2 [91.0 kB] Get:1586 http://deb.debian.org/debian sid/main amd64 flexbar amd64 1:3.5.0-5 [356 kB] Get:1587 http://deb.debian.org/debian sid/main amd64 minimap2 amd64 2.27+dfsg-1+b3 [391 kB] Get:1588 http://deb.debian.org/debian sid/main amd64 flye amd64 2.9.5+dfsg-1 [23.2 MB] Get:1589 http://deb.debian.org/debian sid/main amd64 fml-asm amd64 0.1+git20221215.85f159e-1 [67.2 kB] Get:1590 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-extra all 2.37-8 [1792 kB] Get:1591 http://deb.debian.org/debian sid/main amd64 fonts-dejavu all 2.37-8 [27.9 kB] Get:1592 http://deb.debian.org/debian sid/main amd64 fonts-droid-fallback all 1:8.1.0r7-1~1.gbp36536b [1807 kB] Get:1593 http://deb.debian.org/debian sid/main amd64 fonts-gfs-baskerville all 1.1-6 [43.7 kB] Get:1594 http://deb.debian.org/debian sid/main amd64 fonts-gfs-porson all 1.1-7 [33.8 kB] Get:1595 http://deb.debian.org/debian sid/main amd64 fonts-liberation-sans-narrow all 1:1.07.6-4 [182 kB] Get:1596 http://deb.debian.org/debian sid/main amd64 fonts-lmodern all 2.005-1 [4540 kB] Get:1597 http://deb.debian.org/debian sid/main amd64 fonts-noto-color-emoji all 2.047-1 [9721 kB] Get:1598 http://deb.debian.org/debian sid/main amd64 fonts-texgyre-math all 20180621-6 [2095 kB] Get:1599 http://deb.debian.org/debian sid/main amd64 libseqlib2 amd64 1.2.0+dfsg-11+b3 [172 kB] Get:1600 http://deb.debian.org/debian sid/main amd64 libtabixpp0t64 amd64 1.1.2-2.1+b1 [10.3 kB] Get:1601 http://deb.debian.org/debian sid/main amd64 libsmithwaterman0 amd64 0.0+git20160702.2610e25-12+b2 [36.8 kB] Get:1602 http://deb.debian.org/debian sid/main amd64 libwfa2-0 amd64 2.3.3-4+b2 [60.9 kB] Get:1603 http://deb.debian.org/debian sid/main amd64 libvcflib2 amd64 1.0.12+dfsg-1 [233 kB] Get:1604 http://deb.debian.org/debian sid/main amd64 freebayes amd64 1.3.9-1 [1523 kB] Get:1605 http://deb.debian.org/debian sid/main amd64 libfreecontact0t64 amd64 1.0.21-14 [83.5 kB] Get:1606 http://deb.debian.org/debian sid/main amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3+b2 [898 kB] Get:1607 http://deb.debian.org/debian sid/main amd64 freecontact amd64 1.0.21-14 [381 kB] Get:1608 http://deb.debian.org/debian sid/main amd64 fsa amd64 1.15.9+dfsg-6 [700 kB] Get:1609 http://deb.debian.org/debian sid/main amd64 libsdsl3 amd64 2.1.1+dfsg-5 [214 kB] Get:1610 http://deb.debian.org/debian sid/main amd64 fsm-lite amd64 1.0-8 [96.0 kB] Get:1611 http://deb.debian.org/debian sid/main amd64 fuse3 amd64 3.17.1~rc1-3 [40.4 kB] Get:1612 http://deb.debian.org/debian sid/main amd64 libgtkglext1 amd64 1.2.0-11+b3 [92.2 kB] Get:1613 http://deb.debian.org/debian sid/main amd64 gamgi amd64 0.17.5-1+b1 [713 kB] Get:1614 http://deb.debian.org/debian sid/main amd64 libncl2 amd64 2.1.21+git20210811.b1213a7-6 [383 kB] Get:1615 http://deb.debian.org/debian sid/main amd64 garli amd64 2.1-9 [657 kB] Get:1616 http://deb.debian.org/debian sid/main amd64 garlic amd64 1.6-3+b1 [223 kB] Get:1617 http://deb.debian.org/debian sid/main amd64 seqan-apps amd64 2.4.0+dfsg-16 [12.3 MB] Get:1618 http://deb.debian.org/debian sid/main amd64 gasic all 0.0.r19-8 [20.6 kB] Get:1619 http://deb.debian.org/debian sid/main amd64 libdevel-symdump-perl all 2.18-5 [15.8 kB] Get:1620 http://deb.debian.org/debian sid/main amd64 libapache2-mod-perl2 amd64 2.0.13-2+b2 [809 kB] Get:1621 http://deb.debian.org/debian sid/main amd64 libdbi-perl amd64 1.647-1 [861 kB] Get:1622 http://deb.debian.org/debian sid/main amd64 libapache-dbi-perl all 1.12-3 [48.5 kB] Get:1623 http://deb.debian.org/debian sid/main amd64 libbio-db-biofetch-perl all 1.7.3-4 [17.5 kB] Get:1624 http://deb.debian.org/debian sid/main amd64 libcgi-pm-perl all 4.67-1 [217 kB] Get:1625 http://deb.debian.org/debian sid/main amd64 libbio-db-gff-perl all 1.7.4-1 [273 kB] Get:1626 http://deb.debian.org/debian sid/main amd64 libdbd-pg-perl amd64 3.18.0-1+b3 [210 kB] Get:1627 http://deb.debian.org/debian sid/main amd64 libdbd-sqlite3-perl amd64 1.76-1 [175 kB] Get:1628 http://deb.debian.org/debian sid/main amd64 libbio-db-seqfeature-perl all 1.7.5-1 [166 kB] Get:1629 http://deb.debian.org/debian sid/main amd64 libbio-graphics-perl all 2.40-6 [610 kB] Get:1630 http://deb.debian.org/debian sid/main amd64 libbio-coordinate-perl all 1.7.1-4 [56.7 kB] Get:1631 http://deb.debian.org/debian sid/main amd64 libcgi-session-perl all 4.48-4 [118 kB] Get:1632 http://deb.debian.org/debian sid/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get:1633 http://deb.debian.org/debian sid/main amd64 libexporter-tiny-perl all 1.006002-1 [38.7 kB] Get:1634 http://deb.debian.org/debian sid/main amd64 liblist-moreutils-xs-perl amd64 0.430-4+b2 [42.1 kB] Get:1635 http://deb.debian.org/debian sid/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:1636 http://deb.debian.org/debian sid/main amd64 libstatistics-descriptive-perl all 3.0801-1 [62.8 kB] Get:1637 http://deb.debian.org/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b4 [24.6 kB] Get:1638 http://deb.debian.org/debian sid/main amd64 sqlite3 amd64 3.46.1-2 [385 kB] Get:1639 http://deb.debian.org/debian sid/main amd64 libjs-prototype all 1.7.3-2 [43.7 kB] Get:1640 http://deb.debian.org/debian sid/main amd64 libjs-scriptaculous all 1.9.0-4 [110 kB] Get:1641 http://deb.debian.org/debian sid/main amd64 libanyevent-perl amd64 7.170-2+b7 [384 kB] Get:1642 http://deb.debian.org/debian sid/main amd64 libanyevent-cachedns-perl all 0.08-3 [7708 B] Get:1643 http://deb.debian.org/debian sid/main amd64 libcommon-sense-perl amd64 3.75-3+b5 [22.9 kB] Get:1644 http://deb.debian.org/debian sid/main amd64 libanyevent-http-perl all 2.25-2 [35.2 kB] Get:1645 http://deb.debian.org/debian sid/main amd64 libstring-approx-perl amd64 3.28-2+b5 [39.1 kB] Get:1646 http://deb.debian.org/debian sid/main amd64 libvm-ec2-perl all 1.28-5 [632 kB] Get:1647 http://deb.debian.org/debian sid/main amd64 gbrowse all 2.56+dfsg-12 [2373 kB] Get:1648 http://deb.debian.org/debian sid/main amd64 gdal-data all 3.10.2+dfsg-1 [402 kB] Get:1649 http://deb.debian.org/debian sid/main amd64 gdal-plugins amd64 3.10.2+dfsg-1+b4 [180 kB] Get:1650 http://deb.debian.org/debian sid/main amd64 gdpc amd64 2.2.5-16+b1 [39.9 kB] Get:1651 http://deb.debian.org/debian sid/main amd64 gemma amd64 0.98.5+dfsg-3 [447 kB] Get:1652 http://deb.debian.org/debian sid/main amd64 genometester amd64 4.0+git20200511.91cecb5+dfsg-1 [308 kB] Get:1653 http://deb.debian.org/debian sid/main amd64 genomethreader amd64 1.7.3+dfsg-10+b1 [2077 kB] Get:1654 http://deb.debian.org/debian sid/main amd64 lua-filesystem amd64 1.8.0-3+b2 [11.9 kB] Get:1655 http://deb.debian.org/debian sid/main amd64 lua-lpeg amd64 1.1.0-2 [42.3 kB] Get:1656 http://deb.debian.org/debian sid/main amd64 genometools amd64 1.6.5+ds-2.2 [1656 kB] Get:1657 http://deb.debian.org/debian sid/main amd64 libmuparserx4.0.12 amd64 4.0.12-2 [198 kB] Get:1658 http://deb.debian.org/debian sid/main amd64 libgenomicsdb1 amd64 1.5.4-5 [1617 kB] Get:1659 http://deb.debian.org/debian sid/main amd64 genomicsdb-tools amd64 1.5.4-5 [1569 kB] Get:1660 http://deb.debian.org/debian sid/main amd64 libtinyxml2.6.2v5 amd64 2.6.2-7 [38.2 kB] Get:1661 http://deb.debian.org/debian sid/main amd64 gentle amd64 1.9.5~alpha2+dfsg1-2 [1655 kB] Get:1662 http://deb.debian.org/debian sid/main amd64 libavahi-glib1 amd64 0.8-16 [29.9 kB] Get:1663 http://deb.debian.org/debian sid/main amd64 libjson-glib-1.0-common all 1.10.6+ds-2 [62.3 kB] Get:1664 http://deb.debian.org/debian sid/main amd64 libjson-glib-1.0-0 amd64 1.10.6+ds-2 [64.4 kB] Get:1665 http://deb.debian.org/debian sid/main amd64 libmm-glib0 amd64 1.23.95-2 [243 kB] Get:1666 http://deb.debian.org/debian sid/main amd64 glib-networking-common all 2.80.1-1 [86.0 kB] Get:1667 http://deb.debian.org/debian sid/main amd64 glib-networking-services amd64 2.80.1-1 [12.3 kB] Get:1668 http://deb.debian.org/debian sid/main amd64 glib-networking amd64 2.80.1-1 [69.0 kB] Get:1669 http://deb.debian.org/debian sid/main amd64 libsoup-3.0-common all 3.6.4-3 [63.9 kB] Get:1670 http://deb.debian.org/debian sid/main amd64 libsoup-3.0-0 amd64 3.6.4-3 [278 kB] Get:1671 http://deb.debian.org/debian sid/main amd64 geoclue-2.0 amd64 2.7.2-2 [121 kB] Get:1672 http://deb.debian.org/debian sid/main amd64 gff2aplot amd64 2.0-15 [244 kB] Get:1673 http://deb.debian.org/debian sid/main amd64 gff2ps all 0.98l-6 [60.4 kB] Get:1674 http://deb.debian.org/debian sid/main amd64 gffread amd64 0.12.7-8 [62.5 kB] Get:1675 http://deb.debian.org/debian sid/main amd64 libgfortran-14-dev amd64 14.2.0-19 [880 kB] Get:1676 http://deb.debian.org/debian sid/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-19 [11.7 MB] Get:1677 http://deb.debian.org/debian sid/main amd64 gfortran-14 amd64 14.2.0-19 [14.5 kB] Get:1678 http://deb.debian.org/debian sid/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B] Get:1679 http://deb.debian.org/debian sid/main amd64 gfortran amd64 4:14.2.0-1 [1436 B] Get:1680 http://deb.debian.org/debian sid/main amd64 ggd-utils amd64 1.0.0+ds-1+b14 [2259 kB] Get:1681 http://deb.debian.org/debian sid/main amd64 libghmm1t64 amd64 0.9~rc3-11 [142 kB] Get:1682 http://deb.debian.org/debian sid/main amd64 ghmm amd64 0.9~rc3-11 [154 kB] Get:1683 http://deb.debian.org/debian sid/main amd64 libsecret-common all 0.21.6-3 [27.9 kB] Get:1684 http://deb.debian.org/debian sid/main amd64 libsecret-1-0 amd64 0.21.6-3 [111 kB] Get:1685 http://deb.debian.org/debian sid/main amd64 gir1.2-secret-1 amd64 0.21.6-3 [11.2 kB] Get:1686 http://deb.debian.org/debian sid/main amd64 git-man all 1:2.49.0-1 [2236 kB] Get:1687 http://deb.debian.org/debian sid/main amd64 git amd64 1:2.49.0-1 [9059 kB] Get:1688 http://deb.debian.org/debian sid/main amd64 glam2 amd64 1064-10 [237 kB] Get:1689 http://deb.debian.org/debian sid/main amd64 gmap amd64 2024-11-20+ds-2 [34.5 MB] Get:1690 http://deb.debian.org/debian sid/main amd64 gnome-accessibility-themes all 3.28-4 [2890 kB] Get:1691 http://deb.debian.org/debian sid/main amd64 gnome-themes-extra-data all 3.28-4 [571 kB] Get:1692 http://deb.debian.org/debian sid/main amd64 gtk2-engines-pixbuf amd64 2.24.33-7 [24.2 kB] Get:1693 http://deb.debian.org/debian sid/main amd64 gnome-themes-extra amd64 3.28-4 [519 kB] Get:1694 http://deb.debian.org/debian sid/main amd64 gpg-wks-client amd64 2.2.46-5 [102 kB] Get:1695 http://deb.debian.org/debian sid/main amd64 gpgv amd64 2.2.46-5 [221 kB] Get:1696 http://deb.debian.org/debian sid/main amd64 grabix amd64 0.1.7-5 [15.2 kB] Get:1697 http://deb.debian.org/debian sid/main amd64 graphlan all 1.1.3-6 [1808 kB] Get:1698 http://deb.debian.org/debian sid/main amd64 libpod-parser-perl all 1.67-1 [94.1 kB] Get:1699 http://deb.debian.org/debian sid/main amd64 libgetopt-euclid-perl all 0.4.8-1 [44.6 kB] Get:1700 http://deb.debian.org/debian sid/main amd64 libmath-random-mt-perl amd64 1.17-2+b4 [14.2 kB] Get:1701 http://deb.debian.org/debian sid/main amd64 grinder all 0.5.4-6 [85.3 kB] Get:1702 http://deb.debian.org/debian sid/main amd64 gromacs-data all 2025.1-1 [46.1 MB] Get:1703 http://deb.debian.org/debian sid/main amd64 libmuparser2v5 amd64 2.3.4-1+b1 [149 kB] Get:1704 http://deb.debian.org/debian sid/main amd64 libgromacs10 amd64 2025.1-1 [33.2 MB] Get:1705 http://deb.debian.org/debian sid/main amd64 gromacs amd64 2025.1-1 [60.6 kB] Get:1706 http://deb.debian.org/debian sid/main amd64 ivy all 2.5.3-1 [1299 kB] Get:1707 http://deb.debian.org/debian sid/main amd64 libbsf-java all 1:2.4.0-8 [76.3 kB] Get:1708 http://deb.debian.org/debian sid/main amd64 libjansi-java all 2.4.1-2 [100 kB] Get:1709 http://deb.debian.org/debian sid/main amd64 libhawtjni-runtime-java all 1.18-1 [36.3 kB] Get:1710 http://deb.debian.org/debian sid/main amd64 libjansi-native-java all 1.8-2 [26.0 kB] Get:1711 http://deb.debian.org/debian sid/main amd64 libjansi1-java all 1.18-3.1 [66.6 kB] Get:1712 http://deb.debian.org/debian sid/main amd64 libjline2-java all 2.14.6-5 [151 kB] Get:1713 http://deb.debian.org/debian sid/main amd64 libjsp-api-java all 2.3.4-3 [53.7 kB] Get:1714 http://deb.debian.org/debian sid/main amd64 libqdox-java all 1.12.1-4 [173 kB] Get:1715 http://deb.debian.org/debian sid/main amd64 libservlet-api-java all 4.0.1-2 [81.0 kB] Get:1716 http://deb.debian.org/debian sid/main amd64 libxpp3-java all 1.1.4c-4 [294 kB] Get:1717 http://deb.debian.org/debian sid/main amd64 libxstream-java all 1.4.21-1 [567 kB] Get:1718 http://deb.debian.org/debian sid/main amd64 groovy all 2.4.21-10 [12.8 MB] Get:1719 http://deb.debian.org/debian sid/main amd64 gsort amd64 0.1.4-3+b20 [2285 kB] Get:1720 http://deb.debian.org/debian sid/main amd64 libgstreamer1.0-0 amd64 1.26.0-1 [1411 kB] Get:1721 http://deb.debian.org/debian sid/main amd64 liborc-0.4-0t64 amd64 1:0.4.41-1 [190 kB] Get:1722 http://deb.debian.org/debian sid/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.26.0-1 [985 kB] Get:1723 http://deb.debian.org/debian sid/main amd64 libgstreamer-gl1.0-0 amd64 1.26.0-1 [258 kB] Get:1724 http://deb.debian.org/debian sid/main amd64 gstreamer1.0-gl amd64 1.26.0-1 [163 kB] Get:1725 http://deb.debian.org/debian sid/main amd64 libva2 amd64 2.22.0-3 [79.4 kB] Get:1726 http://deb.debian.org/debian sid/main amd64 libva-drm2 amd64 2.22.0-3 [18.3 kB] Get:1727 http://deb.debian.org/debian sid/main amd64 libva-x11-2 amd64 2.22.0-3 [23.1 kB] Get:1728 http://deb.debian.org/debian sid/main amd64 libvdpau1 amd64 1.5-3+b1 [27.2 kB] Get:1729 http://deb.debian.org/debian sid/main amd64 libvpl2 amd64 1:2.14.0-1+b1 [129 kB] Get:1730 http://deb.debian.org/debian sid/main amd64 libavutil59 amd64 7:7.1.1-1+b1 [413 kB] Get:1731 http://deb.debian.org/debian sid/main amd64 libcodec2-1.2 amd64 1.2.0-3 [8170 kB] Get:1732 http://deb.debian.org/debian sid/main amd64 libgsm1 amd64 1.0.22-1+b2 [29.3 kB] Get:1733 http://deb.debian.org/debian sid/main amd64 libhwy1t64 amd64 1.2.0-2+b2 [676 kB] Get:1734 http://deb.debian.org/debian sid/main amd64 libjxl0.11 amd64 0.11.1-4 [1132 kB] Get:1735 http://deb.debian.org/debian sid/main amd64 libmp3lame0 amd64 3.100-6+b3 [363 kB] Get:1736 http://deb.debian.org/debian sid/main amd64 librsvg2-2 amd64 2.60.0+dfsg-1 [1789 kB] Get:1737 http://deb.debian.org/debian sid/main amd64 libshine3 amd64 3.1.1-2+b2 [23.1 kB] Get:1738 http://deb.debian.org/debian sid/main amd64 libspeex1 amd64 1.2.1-3 [56.8 kB] Get:1739 http://deb.debian.org/debian sid/main amd64 libsoxr0 amd64 0.1.3-4+b2 [81.0 kB] Get:1740 http://deb.debian.org/debian sid/main amd64 libswresample5 amd64 7:7.1.1-1+b1 [98.0 kB] Get:1741 http://deb.debian.org/debian sid/main amd64 libtheoradec1 amd64 1.2.0~alpha1+dfsg-6 [58.4 kB] Get:1742 http://deb.debian.org/debian sid/main amd64 libtheoraenc1 amd64 1.2.0~alpha1+dfsg-6 [108 kB] Get:1743 http://deb.debian.org/debian sid/main amd64 libtwolame0 amd64 0.4.0-2+b2 [51.3 kB] Get:1744 http://deb.debian.org/debian sid/main amd64 libvorbisenc2 amd64 1.3.7-2+b1 [76.1 kB] Get:1745 http://deb.debian.org/debian sid/main amd64 libx264-164 amd64 2:0.164.3108+git31e19f9-2+b1 [558 kB] Get:1746 http://deb.debian.org/debian sid/main amd64 libx265-215 amd64 4.1-2 [1237 kB] Get:1747 http://deb.debian.org/debian sid/main amd64 libxvidcore4 amd64 2:1.3.7-1+b2 [252 kB] Get:1748 http://deb.debian.org/debian sid/main amd64 libzvbi-common all 0.2.44-1 [71.4 kB] Get:1749 http://deb.debian.org/debian sid/main amd64 libzvbi0t64 amd64 0.2.44-1 [278 kB] Get:1750 http://deb.debian.org/debian sid/main amd64 libavcodec61 amd64 7:7.1.1-1+b1 [5801 kB] Get:1751 http://deb.debian.org/debian sid/main amd64 libunibreak6 amd64 6.1-2+b1 [22.0 kB] Get:1752 http://deb.debian.org/debian sid/main amd64 libass9 amd64 1:0.17.3-1+b1 [114 kB] Get:1753 http://deb.debian.org/debian sid/main amd64 libudfread0 amd64 1.1.2-1+b2 [17.7 kB] Get:1754 http://deb.debian.org/debian sid/main amd64 libbluray2 amd64 1:1.3.4-1+b2 [138 kB] Get:1755 http://deb.debian.org/debian sid/main amd64 libchromaprint1 amd64 1.5.1-7 [42.9 kB] Get:1756 http://deb.debian.org/debian sid/main amd64 libdvdread8t64 amd64 6.1.3-2 [86.2 kB] Get:1757 http://deb.debian.org/debian sid/main amd64 libdvdnav4 amd64 6.1.1-3+b1 [44.5 kB] Get:1758 http://deb.debian.org/debian sid/main amd64 libgme0 amd64 0.6.3-7+b2 [131 kB] Get:1759 http://deb.debian.org/debian sid/main amd64 libmpg123-0t64 amd64 1.32.10-1 [149 kB] Get:1760 http://deb.debian.org/debian sid/main amd64 libopenmpt0t64 amd64 0.7.13-1+b1 [855 kB] Get:1761 http://deb.debian.org/debian sid/main amd64 librabbitmq4 amd64 0.15.0-1 [41.8 kB] Get:1762 http://deb.debian.org/debian sid/main amd64 libcjson1 amd64 1.7.18-3+b1 [29.9 kB] Get:1763 http://deb.debian.org/debian sid/main amd64 librist4 amd64 0.2.11+dfsg-1 [72.1 kB] Get:1764 http://deb.debian.org/debian sid/main amd64 libsrt1.5-gnutls amd64 1.5.4-1 [345 kB] Get:1765 http://deb.debian.org/debian sid/main amd64 libssh-4 amd64 0.11.1-1 [208 kB] Get:1766 http://deb.debian.org/debian sid/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1+b2 [221 kB] Get:1767 http://deb.debian.org/debian sid/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1+b1 [162 kB] Get:1768 http://deb.debian.org/debian sid/main amd64 libzmq5 amd64 4.3.5-1+b3 [283 kB] Get:1769 http://deb.debian.org/debian sid/main amd64 libavformat61 amd64 7:7.1.1-1+b1 [1188 kB] Get:1770 http://deb.debian.org/debian sid/main amd64 libbs2b0 amd64 3.1.0+dfsg-8+b1 [12.5 kB] Get:1771 http://deb.debian.org/debian sid/main amd64 libflite1 amd64 2.2-7 [12.8 MB] Get:1772 http://deb.debian.org/debian sid/main amd64 libserd-0-0 amd64 0.32.4-1 [47.0 kB] Get:1773 http://deb.debian.org/debian sid/main amd64 libzix-0-0 amd64 0.6.2-1 [23.1 kB] Get:1774 http://deb.debian.org/debian sid/main amd64 libsord-0-0 amd64 0.16.18-1 [18.0 kB] Get:1775 http://deb.debian.org/debian sid/main amd64 libsratom-0-0 amd64 0.6.18-1 [17.7 kB] Get:1776 http://deb.debian.org/debian sid/main amd64 liblilv-0-0 amd64 0.24.26-1 [43.5 kB] Get:1777 http://deb.debian.org/debian sid/main amd64 libmysofa1 amd64 1.3.3+dfsg-1 [1158 kB] Get:1778 http://deb.debian.org/debian sid/main amd64 libplacebo349 amd64 7.349.0-3 [2542 kB] Get:1779 http://deb.debian.org/debian sid/main amd64 libasyncns0 amd64 0.8-6+b5 [12.0 kB] Get:1780 http://deb.debian.org/debian sid/main amd64 libflac14 amd64 1.5.0+ds-2 [210 kB] Get:1781 http://deb.debian.org/debian sid/main amd64 libsndfile1 amd64 1.2.2-2+b1 [199 kB] Get:1782 http://deb.debian.org/debian sid/main amd64 libpulse0 amd64 17.0+dfsg1-2+b1 [276 kB] Get:1783 http://deb.debian.org/debian sid/main amd64 libsphinxbase3t64 amd64 0.8+5prealpha+1-21+b1 [121 kB] Get:1784 http://deb.debian.org/debian sid/main amd64 libpocketsphinx3 amd64 0.8+5prealpha+1-15+b4 [126 kB] Get:1785 http://deb.debian.org/debian sid/main amd64 libpostproc58 amd64 7:7.1.1-1+b1 [84.7 kB] Get:1786 http://deb.debian.org/debian sid/main amd64 libsamplerate0 amd64 0.2.2-4+b2 [950 kB] Get:1787 http://deb.debian.org/debian sid/main amd64 librubberband2 amd64 3.3.0+dfsg-2+b3 [142 kB] Get:1788 http://deb.debian.org/debian sid/main amd64 libswscale8 amd64 7:7.1.1-1+b1 [230 kB] Get:1789 http://deb.debian.org/debian sid/main amd64 libvidstab1.1 amd64 1.1.0-2+b2 [38.9 kB] Get:1790 http://deb.debian.org/debian sid/main amd64 libzimg2 amd64 3.0.5+ds1-1+b2 [244 kB] Get:1791 http://deb.debian.org/debian sid/main amd64 libavfilter10 amd64 7:7.1.1-1+b1 [4078 kB] Get:1792 http://deb.debian.org/debian sid/main amd64 gstreamer1.0-libav amd64 1.26.0-1 [110 kB] Get:1793 http://deb.debian.org/debian sid/main amd64 libcdparanoia0 amd64 3.10.2+debian-14+b1 [44.8 kB] Get:1794 http://deb.debian.org/debian sid/main amd64 libvisual-0.4-0 amd64 0.4.2-2+b2 [142 kB] Get:1795 http://deb.debian.org/debian sid/main amd64 gstreamer1.0-plugins-base amd64 1.26.0-1 [762 kB] Get:1796 http://deb.debian.org/debian sid/main amd64 libslang2 amd64 2.3.3-5+b2 [549 kB] Get:1797 http://deb.debian.org/debian sid/main amd64 libaa1 amd64 1.4p5-51.1+b1 [50.0 kB] Get:1798 http://deb.debian.org/debian sid/main amd64 libraw1394-11 amd64 2.1.2-2+b2 [38.8 kB] Get:1799 http://deb.debian.org/debian sid/main amd64 libavc1394-0 amd64 0.5.4-5+b2 [18.2 kB] Get:1800 http://deb.debian.org/debian sid/main amd64 libcaca0 amd64 0.99.beta20-5 [202 kB] Get:1801 http://deb.debian.org/debian sid/main amd64 libdv4t64 amd64 1.0.0-17.1+b1 [71.7 kB] Get:1802 http://deb.debian.org/debian sid/main amd64 libiec61883-0 amd64 1.2.0-7 [30.6 kB] Get:1803 http://deb.debian.org/debian sid/main amd64 libopencore-amrnb0 amd64 0.1.6-1+b2 [97.5 kB] Get:1804 http://deb.debian.org/debian sid/main amd64 libopencore-amrwb0 amd64 0.1.6-1+b2 [53.6 kB] Get:1805 http://deb.debian.org/debian sid/main amd64 libtheora0 amd64 1.2.0~alpha1+dfsg-6 [135 kB] Get:1806 http://deb.debian.org/debian sid/main amd64 libshout3 amd64 2.4.6-1+b3 [49.9 kB] Get:1807 http://deb.debian.org/debian sid/main amd64 libtag2 amd64 2.0.2-2 [344 kB] Get:1808 http://deb.debian.org/debian sid/main amd64 libv4lconvert0t64 amd64 1.28.1-1 [150 kB] Get:1809 http://deb.debian.org/debian sid/main amd64 libv4l-0t64 amd64 1.28.1-1 [114 kB] Get:1810 http://deb.debian.org/debian sid/main amd64 libwavpack1 amd64 5.8.1-1 [92.0 kB] Get:1811 http://deb.debian.org/debian sid/main amd64 gstreamer1.0-plugins-good amd64 1.26.0-1 [2329 kB] Get:1812 http://deb.debian.org/debian sid/main amd64 libgssdp-1.6-0 amd64 1.6.3-1+b3 [39.2 kB] Get:1813 http://deb.debian.org/debian sid/main amd64 libgupnp-1.6-0 amd64 1.6.8-1 [89.7 kB] Get:1814 http://deb.debian.org/debian sid/main amd64 libgupnp-igd-1.6-0 amd64 1.6.0-4 [15.5 kB] Get:1815 http://deb.debian.org/debian sid/main amd64 libnice10 amd64 0.1.22-1 [154 kB] Get:1816 http://deb.debian.org/debian sid/main amd64 libgstreamer-plugins-bad1.0-0 amd64 1.26.0-1 [1028 kB] Get:1817 http://deb.debian.org/debian sid/main amd64 libavtp0 amd64 0.2.0-2 [6300 B] Get:1818 http://deb.debian.org/debian sid/main amd64 libusb-1.0-0 amd64 2:1.0.28-1 [59.6 kB] Get:1819 http://deb.debian.org/debian sid/main amd64 libdc1394-25 amd64 2.2.6-4+b2 [110 kB] Get:1820 http://deb.debian.org/debian sid/main amd64 libdca0 amd64 0.0.7-2+b2 [88.0 kB] Get:1821 http://deb.debian.org/debian sid/main amd64 libfaad2 amd64 2.11.2-1 [168 kB] Get:1822 http://deb.debian.org/debian sid/main amd64 libinstpatch-1.0-2 amd64 1.1.6-1+b2 [250 kB] Get:1823 http://deb.debian.org/debian sid/main amd64 libjack-jackd2-0 amd64 1.9.22~dfsg-4 [287 kB] Get:1824 http://deb.debian.org/debian sid/main amd64 libebur128-1 amd64 1.2.6-1+b2 [15.0 kB] Get:1825 http://deb.debian.org/debian sid/main amd64 libwebrtc-audio-processing-1-3 amd64 1.3-3+b1 [385 kB] Get:1826 http://deb.debian.org/debian sid/main amd64 libspa-0.2-modules amd64 1.4.1-1 [1048 kB] Get:1827 http://deb.debian.org/debian sid/main amd64 libpipewire-0.3-0t64 amd64 1.4.1-1 [291 kB] Get:1828 http://deb.debian.org/debian sid/main amd64 libdecor-0-0 amd64 0.2.2-2 [15.5 kB] Get:1829 http://deb.debian.org/debian sid/main amd64 libsdl2-2.0-0 amd64 2.32.2+dfsg-2 [669 kB] Get:1830 http://deb.debian.org/debian sid/main amd64 timgm6mb-soundfont all 1.3-5 [5427 kB] Get:1831 http://deb.debian.org/debian sid/main amd64 libfluidsynth3 amd64 2.4.4+dfsg-1 [236 kB] Get:1832 http://deb.debian.org/debian sid/main amd64 libfreeaptx0 amd64 0.2.2-1 [12.3 kB] Get:1833 http://deb.debian.org/debian sid/main amd64 libimath-3-1-29t64 amd64 3.1.12-1+b3 [45.5 kB] Get:1834 http://deb.debian.org/debian sid/main amd64 liblc3-1 amd64 1.1.3+dfsg-1 [82.7 kB] Get:1835 http://deb.debian.org/debian sid/main amd64 libldacbt-enc2 amd64 2.0.2.3+git20200429+ed310a0-5 [25.2 kB] Get:1836 http://deb.debian.org/debian sid/main amd64 libyajl2 amd64 2.1.0-5+b2 [23.3 kB] Get:1837 http://deb.debian.org/debian sid/main amd64 libraptor2-0 amd64 2.0.16-5+b1 [177 kB] Get:1838 http://deb.debian.org/debian sid/main amd64 liblrdf0 amd64 0.6.1-4+b2 [22.7 kB] Get:1839 http://deb.debian.org/debian sid/main amd64 libltc11 amd64 1.3.2-1+b2 [14.7 kB] Get:1840 http://deb.debian.org/debian sid/main amd64 libmjpegutils-2.1-0t64 amd64 1:2.1.0+debian-8.1+b1 [27.2 kB] Get:1841 http://deb.debian.org/debian sid/main amd64 libmodplug1 amd64 1:0.8.9.0-3+b2 [162 kB] Get:1842 http://deb.debian.org/debian sid/main amd64 libmpcdec6 amd64 2:0.1~r495-3 [32.7 kB] Get:1843 http://deb.debian.org/debian sid/main amd64 libmpeg2encpp-2.1-0t64 amd64 1:2.1.0+debian-8.1+b1 [80.3 kB] Get:1844 http://deb.debian.org/debian sid/main amd64 libmplex2-2.1-0t64 amd64 1:2.1.0+debian-8.1+b1 [50.1 kB] Get:1845 http://deb.debian.org/debian sid/main amd64 libneon27t64 amd64 0.34.0-1 [101 kB] Get:1846 http://deb.debian.org/debian sid/main amd64 libcpuinfo0 amd64 0.0~git20250203.aaac07e-1 [22.9 kB] Get:1847 http://deb.debian.org/debian sid/main amd64 libdnnl3.6 amd64 3.7.1+ds-1 [7411 kB] Get:1848 http://deb.debian.org/debian sid/main amd64 libonnx1t64 amd64 1.17.0-3+b1 [1256 kB] Get:1849 http://deb.debian.org/debian sid/main amd64 libpthreadpool0 amd64 0.0~git20240616.560c60d-1 [36.2 kB] Get:1850 http://deb.debian.org/debian sid/main amd64 libre2-11 amd64 20240702-3+b1 [169 kB] Get:1851 http://deb.debian.org/debian sid/main amd64 libxnnpack0.20241108 amd64 0.0~git20241108.4ea82e5-1 [654 kB] Get:1852 http://deb.debian.org/debian sid/main amd64 libonnxruntime1.21 amd64 1.21.0+dfsg-1 [4264 kB] Get:1853 http://deb.debian.org/debian sid/main amd64 libopenal-data all 1:1.24.2-1 [168 kB] Get:1854 http://deb.debian.org/debian sid/main amd64 libopenal1 amd64 1:1.24.2-1 [637 kB] Get:1855 http://deb.debian.org/debian sid/main amd64 libopenexr-3-1-30 amd64 3.1.13-2 [945 kB] Get:1856 http://deb.debian.org/debian sid/main amd64 libopenh264-8 amd64 2.6.0+dfsg-2 [395 kB] Get:1857 http://deb.debian.org/debian sid/main amd64 libopenni2-0 amd64 2.2.0.33+dfsg-18+b2 [395 kB] Get:1858 http://deb.debian.org/debian sid/main amd64 libqrencode4 amd64 4.1.1-2 [39.8 kB] Get:1859 http://deb.debian.org/debian sid/main amd64 libsbc1 amd64 2.0-1+b2 [32.2 kB] Get:1860 http://deb.debian.org/debian sid/main amd64 libsoundtouch1 amd64 2.3.3+ds-1+b1 [52.8 kB] Get:1861 http://deb.debian.org/debian sid/main amd64 libspandsp2t64 amd64 0.0.6+dfsg-2.2 [282 kB] Get:1862 http://deb.debian.org/debian sid/main amd64 libsrtp2-1 amd64 2.5.0-3+b2 [44.9 kB] Get:1863 http://deb.debian.org/debian sid/main amd64 libvo-aacenc0 amd64 0.1.3-3 [65.8 kB] Get:1864 http://deb.debian.org/debian sid/main amd64 libvo-amrwbenc0 amd64 0.1.3-2+b2 [72.2 kB] Get:1865 http://deb.debian.org/debian sid/main amd64 libwildmidi2 amd64 0.4.3-1+b3 [64.0 kB] Get:1866 http://deb.debian.org/debian sid/main amd64 libzbar0t64 amd64 0.23.93-7 [132 kB] Get:1867 http://deb.debian.org/debian sid/main amd64 libzxing3 amd64 2.3.0-3 [601 kB] Get:1868 http://deb.debian.org/debian sid/main amd64 gstreamer1.0-plugins-bad amd64 1.26.0-1 [3083 kB] Get:1869 http://deb.debian.org/debian sid/main amd64 libxv1 amd64 2:1.0.11-1.1+b3 [23.4 kB] Get:1870 http://deb.debian.org/debian sid/main amd64 gstreamer1.0-x amd64 1.26.0-1 [130 kB] Get:1871 http://deb.debian.org/debian sid/main amd64 python3-dill all 0.3.9-1 [83.5 kB] Get:1872 http://deb.debian.org/debian sid/main amd64 python3-multiprocess all 0.70.17-1 [107 kB] Get:1873 http://deb.debian.org/debian sid/main amd64 gubbins amd64 3.4-2 [95.2 kB] Get:1874 http://deb.debian.org/debian sid/main amd64 gwama amd64 2.2.2+dfsg-6 [86.6 kB] Get:1875 http://deb.debian.org/debian sid/main amd64 harvest-tools amd64 1.3-8+b5 [149 kB] Get:1876 http://deb.debian.org/debian sid/main amd64 hdf5-helpers amd64 1.14.5+repack-3 [26.6 kB] Get:1877 http://deb.debian.org/debian sid/main amd64 hdf5-tools amd64 1.14.5+repack-3 [532 kB] Get:1878 http://deb.debian.org/debian sid/main amd64 hhsuite-data all 3.3.0+ds-8 [4402 kB] Get:1879 http://deb.debian.org/debian sid/main amd64 hhsuite amd64 3.3.0+ds-8+b2 [56.3 MB] Get:1880 http://deb.debian.org/debian sid/main amd64 hilive amd64 2.0a-4 [530 kB] Get:1881 http://deb.debian.org/debian sid/main amd64 python3-ujson amd64 5.10.0-1+b4 [26.0 kB] Get:1882 http://deb.debian.org/debian sid/main amd64 python3-colormap all 1.3.0-1 [17.6 kB] Get:1883 http://deb.debian.org/debian sid/main amd64 python3-pbcore all 2.1.2+dfsg-11 [2831 kB] Get:1884 http://deb.debian.org/debian sid/main amd64 hinge amd64 0.5.0-7+b3 [477 kB] Get:1885 http://deb.debian.org/debian sid/main amd64 hmmer2 amd64 2.3.2+dfsg-12+b2 [314 kB] Get:1886 http://deb.debian.org/debian sid/main amd64 hyphy-common all 2.5.69+dfsg-1 [612 kB] Get:1887 http://deb.debian.org/debian sid/main amd64 hyphy-mpi amd64 2.5.69+dfsg-1 [1535 kB] Get:1888 http://deb.debian.org/debian sid/main amd64 i965-va-driver amd64 2.4.1+dfsg1-2 [315 kB] Get:1889 http://deb.debian.org/debian sid/main amd64 icu-devtools amd64 76.1-3 [215 kB] Get:1890 http://deb.debian.org/debian sid/main amd64 idba amd64 1.1.3-8 [643 kB] Get:1891 http://deb.debian.org/debian sid/main amd64 igblast amd64 1.20.0-2 [18.8 MB] Get:1892 http://deb.debian.org/debian sid/main amd64 libjemalloc2 amd64 5.3.0-3 [274 kB] Get:1893 http://deb.debian.org/debian sid/main amd64 igor amd64 1.4.0+dfsg-5+b1 [595 kB] Get:1894 http://deb.debian.org/debian sid/main amd64 libjsap-java all 2.1-5 [102 kB] Get:1895 http://deb.debian.org/debian sid/main amd64 liblogback-java all 1:1.2.11-6 [701 kB] Get:1896 http://deb.debian.org/debian sid/main amd64 libcommons-configuration-java all 1.10-7 [348 kB] Get:1897 http://deb.debian.org/debian sid/main amd64 libdsiutils-java all 2.7.3+dfsg-1 [524 kB] Get:1898 http://deb.debian.org/debian sid/main amd64 libicb-utils-java all 2.0.1+git20161002.afee1d9-5 [81.5 kB] Get:1899 http://deb.debian.org/debian sid/main amd64 libjide-oss-java all 3.7.6+dfsg-2 [1490 kB] Get:1900 http://deb.debian.org/debian sid/main amd64 libnb-absolutelayout-java all 12.1-3 [12.5 kB] Get:1901 http://deb.debian.org/debian sid/main amd64 libprotobuf-java all 3.21.12-10 [1268 kB] Get:1902 http://deb.debian.org/debian sid/main amd64 igv all 2.18.5+dfsg-1 [3315 kB] Get:1903 http://deb.debian.org/debian sid/main amd64 libpolkit-gobject-1-0 amd64 126-2 [48.0 kB] Get:1904 http://deb.debian.org/debian sid/main amd64 iio-sensor-proxy amd64 3.5-2 [33.6 kB] Get:1905 http://deb.debian.org/debian sid/main amd64 indelible amd64 1.03-6 [392 kB] Get:1906 http://deb.debian.org/debian sid/main amd64 infernal amd64 1.1.5-3 [5936 kB] Get:1907 http://deb.debian.org/debian sid/main amd64 insilicoseq all 2.0.1-1 [4234 kB] Get:1908 http://deb.debian.org/debian sid/main amd64 libigdgmm12 amd64 22.7.0+ds1-1 [176 kB] Get:1909 http://deb.debian.org/debian sid/main amd64 intel-media-va-driver amd64 25.1.3+dfsg1-1 [3440 kB] Get:1910 http://deb.debian.org/debian sid/main amd64 ipig amd64 0.0.r5-5 [168 kB] Get:1911 http://deb.debian.org/debian sid/main amd64 iqtree amd64 2.0.7+dfsg-1+b2 [3652 kB] Get:1912 http://deb.debian.org/debian sid/main amd64 isympy-common all 1.13.3-5 [234 kB] Get:1913 http://deb.debian.org/debian sid/main amd64 isympy3 all 1.13.3-5 [6748 B] Get:1914 http://deb.debian.org/debian sid/main amd64 kmc amd64 3.2.4+dfsg-1+b2 [1049 kB] Get:1915 http://deb.debian.org/debian sid/main amd64 iva amd64 1.0.11+ds-6 [8582 kB] Get:1916 http://deb.debian.org/debian sid/main amd64 jags amd64 4.3.2-1 [1607 kB] Get:1917 http://deb.debian.org/debian sid/main amd64 libcommons-discovery-java all 0.5-4 [71.3 kB] Get:1918 http://deb.debian.org/debian sid/main amd64 libgmbal-commons-java all 3.2.1-b003-1.1 [46.5 kB] Get:1919 http://deb.debian.org/debian sid/main amd64 libgmbal-pfl-java all 4.0.1-b003-2 [1029 kB] Get:1920 http://deb.debian.org/debian sid/main amd64 libgmbal-java all 4.0.0-b002-1.1 [188 kB] Get:1921 http://deb.debian.org/debian sid/main amd64 libsaaj-java all 1.4.0-4 [38.1 kB] Get:1922 http://deb.debian.org/debian sid/main amd64 libjaxws-api-java all 2.3.0-1.1 [49.9 kB] Get:1923 http://deb.debian.org/debian sid/main amd64 libjws-api-java all 1.1-2 [21.2 kB] Get:1924 http://deb.debian.org/debian sid/main amd64 libknopflerfish-osgi-framework-java all 6.1.1-4 [651 kB] Get:1925 http://deb.debian.org/debian sid/main amd64 libisorelax-java all 20041111-14 [63.4 kB] Get:1926 http://deb.debian.org/debian sid/main amd64 libmsv-java all 2009.1+dfsg1-6 [760 kB] Get:1927 http://deb.debian.org/debian sid/main amd64 libstax2-api-java all 4.1-1 [152 kB] Get:1928 http://deb.debian.org/debian sid/main amd64 libwoodstox-java all 1:6.2.1-1 [1124 kB] Get:1929 http://deb.debian.org/debian sid/main amd64 libmetro-policy-java all 2.7.2-4 [172 kB] Get:1930 http://deb.debian.org/debian sid/main amd64 libmimepull-java all 1.9.7-2 [67.1 kB] Get:1931 http://deb.debian.org/debian sid/main amd64 libsaaj-ri-java all 1.4.1-1.1 [461 kB] Get:1932 http://deb.debian.org/debian sid/main amd64 libjaxws-java all 2.3.0.2-2 [3061 kB] Get:1933 http://deb.debian.org/debian sid/main amd64 javahelp2 all 2.0.05.ds1-10 [907 kB] Get:1934 http://deb.debian.org/debian sid/main amd64 libandroid-json-org-java all 20121204-20090211-6 [35.5 kB] Get:1935 http://deb.debian.org/debian sid/main amd64 libapache-mime4j-java all 0.8.12-1 [449 kB] Get:1936 http://deb.debian.org/debian sid/main amd64 libcommons-httpclient-java all 3.1-16 [291 kB] Get:1937 http://deb.debian.org/debian sid/main amd64 libmail-java all 1.6.5-3 [702 kB] Get:1938 http://deb.debian.org/debian sid/main amd64 libwsdl4j-java all 1.6.3-4.1 [184 kB] Get:1939 http://deb.debian.org/debian sid/main amd64 libaxis-java all 1.4-29 [1510 kB] Get:1940 http://deb.debian.org/debian sid/main amd64 libhttpmime-java all 4.5.14-1 [40.9 kB] Get:1941 http://deb.debian.org/debian sid/main amd64 libintervalstorej-java all 1.2+dfsg-5 [26.0 kB] Get:1942 http://deb.debian.org/debian sid/main amd64 libjaba-client-java all 2.2.0-2 [400 kB] Get:1943 http://deb.debian.org/debian sid/main amd64 libjaxrs-api-java all 2.1.2-2 [115 kB] Get:1944 http://deb.debian.org/debian sid/main amd64 libjsr311-api-java all 1.1.1-2 [47.5 kB] Get:1945 http://deb.debian.org/debian sid/main amd64 libjersey1-core-java all 1.19.3-8 [392 kB] Get:1946 http://deb.debian.org/debian sid/main amd64 libjersey1-client-java all 1.19.3-8 [128 kB] Get:1947 http://deb.debian.org/debian sid/main amd64 libel-api-java all 3.0.0-3 [64.9 kB] Get:1948 http://deb.debian.org/debian sid/main amd64 libwebsocket-api-java all 1.1-2 [40.1 kB] Get:1949 http://deb.debian.org/debian sid/main amd64 libjetty9-java all 9.4.57-1 [2965 kB] Get:1950 http://deb.debian.org/debian sid/main amd64 libjfreesvg-java all 5.0.6-2 [55.3 kB] Get:1951 http://deb.debian.org/debian sid/main amd64 libjswingreader-java all 0.3-4 [81.3 kB] Get:1952 http://deb.debian.org/debian sid/main amd64 libmiglayout-java all 11.4.2+ds-2 [183 kB] Get:1953 http://deb.debian.org/debian sid/main amd64 libcastor-core-java all 1.3.2-7 [54.0 kB] Get:1954 http://deb.debian.org/debian sid/main amd64 libcastor-xml-java all 1.3.2-7 [736 kB] Get:1955 http://deb.debian.org/debian sid/main amd64 libvamsas-client-java all 0.2+dfsg-2 [584 kB] Get:1956 http://deb.debian.org/debian sid/main amd64 varna all 3-93+ds-7 [801 kB] Get:1957 http://deb.debian.org/debian sid/main amd64 jalview all 2.11.4.1+dfsg-1 [8968 kB] Get:1958 http://deb.debian.org/debian sid/main amd64 jellyfish1 amd64 1.1.11-10 [141 kB] Get:1959 http://deb.debian.org/debian sid/main amd64 libpal-java all 1.5.1+dfsg-9 [698 kB] Get:1960 http://deb.debian.org/debian sid/main amd64 phyml amd64 3:3.3.20220408-4+b1 [1106 kB] Get:1961 http://deb.debian.org/debian sid/main amd64 jmodeltest all 2.1.10+dfsg-12 [991 kB] Get:1962 http://deb.debian.org/debian sid/main amd64 jmol all 16.2.33+dfsg-1 [302 kB] Get:1963 http://deb.debian.org/debian sid/main amd64 libapiguardian-java all 1.1.2-1 [4656 B] Get:1964 http://deb.debian.org/debian sid/main amd64 libopentest4j-java all 1.2.0-4 [9516 B] Get:1965 http://deb.debian.org/debian sid/main amd64 libopentest4j-reporting-java all 0.1.0-M1-2 [49.0 kB] Get:1966 http://deb.debian.org/debian sid/main amd64 libpicocli-java all 4.6.2-2 [390 kB] Get:1967 http://deb.debian.org/debian sid/main amd64 libunivocity-parsers-java all 2.9.1-1 [397 kB] Get:1968 http://deb.debian.org/debian sid/main amd64 junit5 all 5.10.3-1 [2459 kB] Get:1969 http://deb.debian.org/debian sid/main amd64 kalign amd64 1:3.4.0-1+b2 [138 kB] Get:1970 http://deb.debian.org/debian sid/main amd64 kallisto amd64 0.48.0+dfsg-4+b1 [286 kB] Get:1971 http://deb.debian.org/debian sid/main amd64 kaptive all 2.0.8-1 [24.2 kB] Get:1972 http://deb.debian.org/debian sid/main amd64 kaptive-data all 2.0.8-1 [2686 kB] Get:1973 http://deb.debian.org/debian sid/main amd64 python3-iso8601 all 2.1.0-2 [12.1 kB] Get:1974 http://deb.debian.org/debian sid/main amd64 python3-avro all 1.12.0+dfsg-1 [74.0 kB] Get:1975 http://deb.debian.org/debian sid/main amd64 python3-pbcommand all 2.1.1+git20231020.28d1635-1 [102 kB] Get:1976 http://deb.debian.org/debian sid/main amd64 libbigwig0t64 amd64 0.4.7+dfsg-3.1+b2 [28.7 kB] Get:1977 http://deb.debian.org/debian sid/main amd64 python3-pybigwig amd64 0.3.23+dfsg-1+b3 [37.8 kB] Get:1978 http://deb.debian.org/debian sid/main amd64 kineticstools-data all 0.6.1+git20220223.1326a4d+dfsg-6 [21.7 MB] Get:1979 http://deb.debian.org/debian sid/main amd64 python3-kineticstools amd64 0.6.1+git20220223.1326a4d+dfsg-6 [47.0 kB] Get:1980 http://deb.debian.org/debian sid/main amd64 kineticstools all 0.6.1+git20220223.1326a4d+dfsg-6 [14.9 kB] Get:1981 http://deb.debian.org/debian sid/main amd64 king-probe amd64 02.21-1 [143 kB] Get:1982 http://deb.debian.org/debian sid/main amd64 kissplice amd64 2.6.7-1 [497 kB] Get:1983 http://deb.debian.org/debian sid/main amd64 kleborate amd64 2.4.1-4 [7742 kB] Get:1984 http://deb.debian.org/debian sid/main amd64 kma amd64 1.4.21-1 [224 kB] Get:1985 http://deb.debian.org/debian sid/main amd64 sim4db amd64 0~20150903+r2013-9+b1 [445 kB] Get:1986 http://deb.debian.org/debian sid/main amd64 kmer all 0~20150903+r2013-9 [4956 B] Get:1987 http://deb.debian.org/debian sid/main amd64 kmer-examples all 0~20150903+r2013-9 [2352 kB] Get:1988 http://deb.debian.org/debian sid/main amd64 kmerresistance amd64 2.2.0-4 [11.3 kB] Get:1989 http://deb.debian.org/debian sid/main amd64 kraken amd64 1.1.1-4 [752 kB] Get:1990 http://deb.debian.org/debian sid/main amd64 kraken2 amd64 2.1.3-1 [868 kB] Get:1991 http://deb.debian.org/debian sid/main amd64 libgssrpc4t64 amd64 1.21.3-5 [60.0 kB] Get:1992 http://deb.debian.org/debian sid/main amd64 libkadm5clnt-mit12 amd64 1.21.3-5 [42.5 kB] Get:1993 http://deb.debian.org/debian sid/main amd64 libkdb5-10t64 amd64 1.21.3-5 [42.6 kB] Get:1994 http://deb.debian.org/debian sid/main amd64 libkadm5srv-mit12 amd64 1.21.3-5 [54.2 kB] Get:1995 http://deb.debian.org/debian sid/main amd64 krb5-multidev amd64 1.21.3-5 [126 kB] Get:1996 http://deb.debian.org/debian sid/main amd64 ksh93u+m amd64 1.0.10-2 [891 kB] Get:1997 http://deb.debian.org/debian sid/main amd64 ksh all 20240113-1.0.10-2 [51.1 kB] Get:1998 http://deb.debian.org/debian sid/main amd64 lagan amd64 2.0-10 [184 kB] Get:1999 http://deb.debian.org/debian sid/main amd64 lamarc amd64 2.1.10.1+dfsg-7+b4 [3864 kB] Get:2000 http://deb.debian.org/debian sid/main amd64 last-align amd64 1609-1 [1841 kB] Get:2001 http://deb.debian.org/debian sid/main amd64 lamassemble all 1.7.2-2 [135 kB] Get:2002 http://deb.debian.org/debian sid/main amd64 lambda-align amd64 1.0.3-6 [1249 kB] Get:2003 http://deb.debian.org/debian sid/main amd64 lambda-align2 amd64 2.0.1-3 [2025 kB] Get:2004 http://deb.debian.org/debian sid/main amd64 laptop-detect all 0.16+nmu1 [5044 B] Get:2005 http://deb.debian.org/debian sid/main amd64 lastz amd64 1.04.22-2 [521 kB] Get:2006 http://deb.debian.org/debian sid/main amd64 python3-markupsafe amd64 2.1.5-1+b3 [14.0 kB] Get:2007 http://deb.debian.org/debian sid/main amd64 python3-jinja2 all 3.1.5-2 [107 kB] Get:2008 http://deb.debian.org/debian sid/main amd64 python3-tzlocal all 5.3.1-1 [24.2 kB] Get:2009 http://deb.debian.org/debian sid/main amd64 python3-rpy2 amd64 3.5.17-1 [208 kB] Get:2010 http://deb.debian.org/debian sid/main amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB] Get:2011 http://deb.debian.org/debian sid/main amd64 r-cran-libcoin amd64 1.0-10-1 [769 kB] Get:2012 http://deb.debian.org/debian sid/main amd64 r-cran-matrixstats amd64 1.5.0-1 [502 kB] Get:2013 http://deb.debian.org/debian sid/main amd64 r-cran-modeltools all 0.2-23-2 [214 kB] Get:2014 http://deb.debian.org/debian sid/main amd64 r-cran-th.data all 1.1-3-1 [8732 kB] Get:2015 http://deb.debian.org/debian sid/main amd64 r-cran-zoo amd64 1.8-13-1 [1000 kB] Get:2016 http://deb.debian.org/debian sid/main amd64 r-cran-sandwich all 3.1-1-1 [1488 kB] Get:2017 http://deb.debian.org/debian sid/main amd64 r-cran-codetools all 0.2-20-1 [91.1 kB] Get:2018 http://deb.debian.org/debian sid/main amd64 r-cran-multcomp all 1.4-28-1 [700 kB] Get:2019 http://deb.debian.org/debian sid/main amd64 r-cran-coin amd64 1.4-3-1 [1565 kB] Get:2020 http://deb.debian.org/debian sid/main amd64 lefse all 1.1.2-2 [57.5 kB] Get:2021 http://deb.debian.org/debian sid/main amd64 libc6-i386 amd64 2.41-6 [2537 kB] Get:2022 http://deb.debian.org/debian sid/main amd64 lib32gcc-s1 amd64 14.2.0-19 [88.4 kB] Get:2023 http://deb.debian.org/debian sid/main amd64 lib32stdc++6 amd64 14.2.0-19 [745 kB] Get:2024 http://deb.debian.org/debian sid/main amd64 libaacs0 amd64 0.11.1-4+b1 [58.5 kB] Get:2025 http://deb.debian.org/debian sid/main amd64 libipc-sharelite-perl amd64 0.17-5+b3 [23.1 kB] Get:2026 http://deb.debian.org/debian sid/main amd64 libcache-cache-perl all 1.08-3 [63.4 kB] Get:2027 http://deb.debian.org/debian sid/main amd64 libace-perl amd64 1.92-12+b1 [274 kB] Get:2028 http://deb.debian.org/debian sid/main amd64 libstemmer0d amd64 2.2.0-4+b2 [119 kB] Get:2029 http://deb.debian.org/debian sid/main amd64 libxmlb2 amd64 0.3.22-1 [63.1 kB] Get:2030 http://deb.debian.org/debian sid/main amd64 libappstream5 amd64 1.0.4-1 [225 kB] Get:2031 http://deb.debian.org/debian sid/main amd64 libadwaita-1-0 amd64 1.7.0-1 [524 kB] Get:2032 http://deb.debian.org/debian sid/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get:2033 http://deb.debian.org/debian sid/main amd64 libfann2 amd64 2.2.0+ds-8+b3 [63.5 kB] Get:2034 http://deb.debian.org/debian sid/main amd64 libai-fann-perl amd64 0.10-5+b7 [28.7 kB] Get:2035 http://deb.debian.org/debian sid/main amd64 libalgorithm-diff-xs-perl amd64 0.04-9 [11.1 kB] Get:2036 http://deb.debian.org/debian sid/main amd64 libalgorithm-merge-perl all 0.08-5 [11.8 kB] Get:2037 http://deb.debian.org/debian sid/main amd64 libalgorithm-munkres-perl all 0.08-5 [11.3 kB] Get:2038 http://deb.debian.org/debian sid/main amd64 libsvm3 amd64 3.24+ds-6.1 [41.6 kB] Get:2039 http://deb.debian.org/debian sid/main amd64 libalgorithm-svm-perl amd64 0.13-4+b2 [29.8 kB] Get:2040 http://deb.debian.org/debian sid/main amd64 libapache2-reload-perl all 0.14-1 [16.2 kB] Get:2041 http://deb.debian.org/debian sid/main amd64 libapfloat-java all 1.14.0-2 [725 kB] Get:2042 http://deb.debian.org/debian sid/main amd64 libarmadillo14 amd64 1:14.2.3+dfsg-1+b1 [102 kB] Get:2043 http://deb.debian.org/debian sid/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:2044 http://deb.debian.org/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b5 [36.1 kB] Get:2045 http://deb.debian.org/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:2046 http://deb.debian.org/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:2047 http://deb.debian.org/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:2048 http://deb.debian.org/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:2049 http://deb.debian.org/debian sid/main amd64 libtype-tiny-perl all 2.004000-1 [357 kB] Get:2050 http://deb.debian.org/debian sid/main amd64 libarray-compare-perl all 3.0.8-1 [14.9 kB] Get:2051 http://deb.debian.org/debian sid/main amd64 libarray-utils-perl all 0.5-3 [6184 B] Get:2052 http://deb.debian.org/debian sid/main amd64 libasync-interrupt-perl amd64 1.26-1+b6 [33.4 kB] Get:2053 http://deb.debian.org/debian sid/main amd64 libxkbfile1 amd64 1:1.1.0-1+b4 [76.5 kB] Get:2054 http://deb.debian.org/debian sid/main amd64 libxmuu1 amd64 2:1.1.3-3+b4 [21.9 kB] Get:2055 http://deb.debian.org/debian sid/main amd64 libxxf86dga1 amd64 2:1.1.5-1+b3 [20.8 kB] Get:2056 http://deb.debian.org/debian sid/main amd64 x11-utils amd64 7.7+7 [182 kB] Get:2057 http://deb.debian.org/debian sid/main amd64 libatk-wrapper-java all 0.40.0-3 [63.4 kB] Get:2058 http://deb.debian.org/debian sid/main amd64 libatk-wrapper-java-jni amd64 0.40.0-3+b3 [53.6 kB] Get:2059 http://deb.debian.org/debian sid/main amd64 libauthen-sasl-perl all 2.1700-1 [44.8 kB] Get:2060 http://deb.debian.org/debian sid/main amd64 libavogadro-data all 1.100.0-1 [31.6 MB] Get:2061 http://deb.debian.org/debian sid/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB] Get:2062 http://deb.debian.org/debian sid/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:2063 http://deb.debian.org/debian sid/main amd64 libbdplus0 amd64 0.2.0-4+b1 [54.9 kB] Get:2064 http://deb.debian.org/debian sid/main amd64 libberkeleydb-perl amd64 0.66-1 [121 kB] Get:2065 http://deb.debian.org/debian sid/main amd64 libbetter-appframework-java all 1.9.2-2 [172 kB] Get:2066 http://deb.debian.org/debian sid/main amd64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] Get:2067 http://deb.debian.org/debian sid/main amd64 libbibtex-parser-perl all 1.05+dfsg-1 [17.4 kB] Get:2068 http://deb.debian.org/debian sid/main amd64 libstaden-read14t64 amd64 1.15.0-1.1+b2 [268 kB] Get:2069 http://deb.debian.org/debian sid/main amd64 libbio-scf-perl amd64 1.03-7+b3 [20.1 kB] Get:2070 http://deb.debian.org/debian sid/main amd64 libbio-searchio-hmmer-perl all 1.7.3-2 [95.9 kB] Get:2071 http://deb.debian.org/debian sid/main amd64 libcarp-clan-perl all 6.08-2 [14.1 kB] Get:2072 http://deb.debian.org/debian sid/main amd64 libbit-vector-perl amd64 7.4-3+b3 [141 kB] Get:2073 http://deb.debian.org/debian sid/main amd64 libblas-dev amd64 3.12.1-2 [170 kB] Get:2074 http://deb.debian.org/debian sid/main amd64 libblosc1 amd64 1.21.5+ds-1+b2 [49.5 kB] Get:2075 http://deb.debian.org/debian sid/main amd64 libblosc2-4 amd64 2.17.0+ds-1 [193 kB] Get:2076 http://deb.debian.org/debian sid/main amd64 libboost-atomic1.83.0 amd64 1.83.0-4.1+b2 [234 kB] Get:2077 http://deb.debian.org/debian sid/main amd64 libboost1.83-dev amd64 1.83.0-4.1+b2 [10.6 MB] Get:2078 http://deb.debian.org/debian sid/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get:2079 http://deb.debian.org/debian sid/main amd64 libboost-math1.83.0 amd64 1.83.0-4.1+b2 [524 kB] Get:2080 http://deb.debian.org/debian sid/main amd64 libboost-mpi1.83.0 amd64 1.83.0-4.1+b2 [272 kB] Get:2081 http://deb.debian.org/debian sid/main amd64 libboost-timer1.83.0 amd64 1.83.0-4.1+b2 [235 kB] Get:2082 http://deb.debian.org/debian sid/main amd64 libbpp-seq-omics3t64 amd64 2.4.1-12 [230 kB] Get:2083 http://deb.debian.org/debian sid/main amd64 libbpp-phyl-omics3t64 amd64 2.4.1-7+b1 [73.2 kB] Get:2084 http://deb.debian.org/debian sid/main amd64 libbrotli-dev amd64 1.1.0-2+b7 [316 kB] Get:2085 http://deb.debian.org/debian sid/main amd64 libbsd-resource-perl amd64 1.2911-2+b4 [31.9 kB] Get:2086 http://deb.debian.org/debian sid/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB] Get:2087 http://deb.debian.org/debian sid/main amd64 libcairo-perl amd64 1.109-5+b1 [92.5 kB] Get:2088 http://deb.debian.org/debian sid/main amd64 libcares2 amd64 1.34.4-2.1 [97.9 kB] Get:2089 http://deb.debian.org/debian sid/main amd64 libcbf1t64 amd64 0.9.7+dfsg1-5+b1 [364 kB] Get:2090 http://deb.debian.org/debian sid/main amd64 libcfitsio10t64 amd64 4.5.0-5 [575 kB] Get:2091 http://deb.debian.org/debian sid/main amd64 libcgi-fast-perl all 1:2.17-1 [11.8 kB] Get:2092 http://deb.debian.org/debian sid/main amd64 libcharts4j-java all 1.3-4 [162 kB] Get:2093 http://deb.debian.org/debian sid/main amd64 libclang-rt-19-dev amd64 1:19.1.7-3 [3690 kB] Get:2094 http://deb.debian.org/debian sid/main amd64 libclass-c3-xs-perl amd64 0.15-1+b6 [17.4 kB] Get:2095 http://deb.debian.org/debian sid/main amd64 libclass-singleton-perl all 1.6-2 [12.5 kB] Get:2096 http://deb.debian.org/debian sid/main amd64 libclass-tiny-perl all 1.008-2 [18.6 kB] Get:2097 http://deb.debian.org/debian sid/main amd64 libcvector2 amd64 1.0.4.1-2+b2 [6216 B] Get:2098 http://deb.debian.org/debian sid/main amd64 libcneartree7t64 amd64 5.1.1+dfsg1-2.1+b1 [30.8 kB] Get:2099 http://deb.debian.org/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-3 [44.8 kB] Get:2100 http://deb.debian.org/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:2101 http://deb.debian.org/debian sid/main amd64 libwant-perl amd64 0.29-2+b4 [27.6 kB] Get:2102 http://deb.debian.org/debian sid/main amd64 libcontextual-return-perl all 0.004014-4 [54.9 kB] Get:2103 http://deb.debian.org/debian sid/main amd64 libcontrolsfx-java all 11.0.0-1 [860 kB] Get:2104 http://deb.debian.org/debian sid/main amd64 libconvert-binary-c-perl amd64 0.85-1+b1 [273 kB] Get:2105 http://deb.debian.org/debian sid/main amd64 libcqrlib2 amd64 1.1.4-3+b2 [13.5 kB] Get:2106 http://deb.debian.org/debian sid/main amd64 libcrypt-rc4-perl all 2.02-5 [7480 B] Get:2107 http://deb.debian.org/debian sid/main amd64 libjson-c5 amd64 0.18+ds-1 [46.0 kB] Get:2108 http://deb.debian.org/debian sid/main amd64 libcryptsetup12 amd64 2:2.7.5-1 [253 kB] Get:2109 http://deb.debian.org/debian sid/main amd64 libgnutls-openssl27t64 amd64 3.8.9-2 [455 kB] Get:2110 http://deb.debian.org/debian sid/main amd64 libidn2-dev amd64 2.3.8-2 [103 kB] Get:2111 http://deb.debian.org/debian sid/main amd64 libp11-kit-dev amd64 0.25.5-3 [208 kB] Get:2112 http://deb.debian.org/debian sid/main amd64 libtasn1-6-dev amd64 4.20.0-2 [99.2 kB] Get:2113 http://deb.debian.org/debian sid/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3 [329 kB] Get:2114 http://deb.debian.org/debian sid/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3 [642 kB] Get:2115 http://deb.debian.org/debian sid/main amd64 nettle-dev amd64 3.10.1-1 [1318 kB] Get:2116 http://deb.debian.org/debian sid/main amd64 libgnutls28-dev amd64 3.8.9-2 [1401 kB] Get:2117 http://deb.debian.org/debian sid/main amd64 libkrb5-dev amd64 1.21.3-5 [16.1 kB] Get:2118 http://deb.debian.org/debian sid/main amd64 libldap-dev amd64 2.6.9+dfsg-2 [311 kB] Get:2119 http://deb.debian.org/debian sid/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get:2120 http://deb.debian.org/debian sid/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get:2121 http://deb.debian.org/debian sid/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get:2122 http://deb.debian.org/debian sid/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get:2123 http://deb.debian.org/debian sid/main amd64 libnghttp3-dev amd64 1.8.0-1 [91.3 kB] Get:2124 http://deb.debian.org/debian sid/main amd64 libngtcp2-crypto-gnutls-dev amd64 1.11.0-1 [34.0 kB] Get:2125 http://deb.debian.org/debian sid/main amd64 libngtcp2-dev amd64 1.11.0-1 [179 kB] Get:2126 http://deb.debian.org/debian sid/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get:2127 http://deb.debian.org/debian sid/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get:2128 http://deb.debian.org/debian sid/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get:2129 http://deb.debian.org/debian sid/main amd64 libssl-dev amd64 3.4.1-1 [2787 kB] Get:2130 http://deb.debian.org/debian sid/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get:2131 http://deb.debian.org/debian sid/main amd64 libzstd-dev amd64 1.5.7+dfsg-1 [371 kB] Get:2132 http://deb.debian.org/debian sid/main amd64 libcurl4-gnutls-dev amd64 8.13.0~rc2-1 [490 kB] Get:2133 http://deb.debian.org/debian sid/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:2134 http://deb.debian.org/debian sid/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:2135 http://deb.debian.org/debian sid/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:2136 http://deb.debian.org/debian sid/main amd64 libdata-compare-perl all 1.29-1 [19.6 kB] Get:2137 http://deb.debian.org/debian sid/main amd64 libdata-dump-perl all 1.25-1 [28.4 kB] Get:2138 http://deb.debian.org/debian sid/main amd64 libdate-calc-perl all 6.4-2 [191 kB] Get:2139 http://deb.debian.org/debian sid/main amd64 libdate-calc-xs-perl amd64 6.4-2+b4 [52.4 kB] Get:2140 http://deb.debian.org/debian sid/main amd64 libdate-manip-perl all 6.97-1 [906 kB] Get:2141 http://deb.debian.org/debian sid/main amd64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:2142 http://deb.debian.org/debian sid/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB] Get:2143 http://deb.debian.org/debian sid/main amd64 libsub-name-perl amd64 0.28-1 [12.2 kB] Get:2144 http://deb.debian.org/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:2145 http://deb.debian.org/debian sid/main amd64 libnamespace-autoclean-perl all 0.31-1 [13.8 kB] Get:2146 http://deb.debian.org/debian sid/main amd64 libparams-validationcompiler-perl all 0.31-1 [30.9 kB] Get:2147 http://deb.debian.org/debian sid/main amd64 libxstring-perl amd64 0.005-2+b4 [8076 B] Get:2148 http://deb.debian.org/debian sid/main amd64 libspecio-perl all 0.50-1 [132 kB] Get:2149 http://deb.debian.org/debian sid/main amd64 libdatetime-locale-perl all 1:1.41-1 [3131 kB] Get:2150 http://deb.debian.org/debian sid/main amd64 libdatetime-timezone-perl all 1:2.64-1+2025a [261 kB] Get:2151 http://deb.debian.org/debian sid/main amd64 libdatetime-perl amd64 2:1.65-1+b2 [116 kB] Get:2152 http://deb.debian.org/debian sid/main amd64 libdatetime-format-strptime-perl all 1.7900-1 [37.3 kB] Get:2153 http://deb.debian.org/debian sid/main amd64 libdatetime-format-builder-perl all 0.8300-1 [63.8 kB] Get:2154 http://deb.debian.org/debian sid/main amd64 libdatetime-format-iso8601-perl all 0.17-1 [21.9 kB] Get:2155 http://deb.debian.org/debian sid/main amd64 libdbd-mysql-perl amd64 4.053-1 [114 kB] Get:2156 http://deb.debian.org/debian sid/main amd64 libmatthew-debug-java all 0.8.1-4 [12.8 kB] Get:2157 http://deb.debian.org/debian sid/main amd64 libunixsocket-java amd64 0.8.1-4 [15.1 kB] Get:2158 http://deb.debian.org/debian sid/main amd64 libdbus-java all 2.8-11 [141 kB] Get:2159 http://deb.debian.org/debian sid/main amd64 libdecor-0-plugin-1-gtk amd64 0.2.2-2 [22.7 kB] Get:2160 http://deb.debian.org/debian sid/main amd64 libdeflate-dev amd64 1.23-1+b1 [56.0 kB] Get:2161 http://deb.debian.org/debian sid/main amd64 libpadwalker-perl amd64 2.5-1+b6 [18.6 kB] Get:2162 http://deb.debian.org/debian sid/main amd64 libdevel-caller-perl amd64 2.07-1+b3 [11.5 kB] Get:2163 http://deb.debian.org/debian sid/main amd64 libdevel-lexalias-perl amd64 0.05-3+b4 [8660 B] Get:2164 http://deb.debian.org/debian sid/main amd64 libdevel-partialdump-perl all 0.20-2 [15.6 kB] Get:2165 http://deb.debian.org/debian sid/main amd64 libdigest-md5-file-perl all 0.08-1.1 [9608 B] Get:2166 http://deb.debian.org/debian sid/main amd64 libdigest-perl-md5-perl all 1.9-5 [11.7 kB] Get:2167 http://deb.debian.org/debian sid/main amd64 libdistlib-java all 1.0-5 [72.5 kB] Get:2168 http://deb.debian.org/debian sid/main amd64 libdjvulibre-text all 3.5.28-2 [61.8 kB] Get:2169 http://deb.debian.org/debian sid/main amd64 libdjvulibre21 amd64 3.5.28-2+b2 [610 kB] Get:2170 http://deb.debian.org/debian sid/main amd64 libdw1t64 amd64 0.192-4 [255 kB] Get:2171 http://deb.debian.org/debian sid/main amd64 libedlib1 amd64 1.2.7-6+b3 [18.1 kB] Get:2172 http://deb.debian.org/debian sid/main amd64 libemail-date-format-perl all 1.008-1 [7356 B] Get:2173 http://deb.debian.org/debian sid/main amd64 libenv-path-perl all 0.19-4 [19.1 kB] Get:2174 http://deb.debian.org/debian sid/main amd64 liberfa1 amd64 2.0.1-1+b2 [128 kB] Get:2175 http://deb.debian.org/debian sid/main amd64 libev-perl amd64 4.34-1+b4 [258 kB] Get:2176 http://deb.debian.org/debian sid/main amd64 libev4t64 amd64 1:4.33-2.1+b1 [42.4 kB] Get:2177 http://deb.debian.org/debian sid/main amd64 libexpat1-dev amd64 2.7.0-1 [160 kB] Get:2178 http://deb.debian.org/debian sid/main amd64 libfcgi-bin amd64 2.4.2-2.1+b1 [11.8 kB] Get:2179 http://deb.debian.org/debian sid/main amd64 libfile-chdir-perl all 0.1008-1.2 [11.9 kB] Get:2180 http://deb.debian.org/debian sid/main amd64 libfile-copy-link-perl all 0.200-1 [13.8 kB] Get:2181 http://deb.debian.org/debian sid/main amd64 libfile-desktopentry-perl all 0.22-3 [17.6 kB] Get:2182 http://deb.debian.org/debian sid/main amd64 libfile-fcntllock-perl amd64 0.22-4+b4 [34.6 kB] Get:2183 http://deb.debian.org/debian sid/main amd64 libfile-grep-perl all 0.02-3 [8352 B] Get:2184 http://deb.debian.org/debian sid/main amd64 libfile-mimeinfo-perl all 0.35-1 [44.4 kB] Get:2185 http://deb.debian.org/debian sid/main amd64 libfile-slurp-perl all 9999.32-2 [26.7 kB] Get:2186 http://deb.debian.org/debian sid/main amd64 libfile-slurper-perl all 0.014-1 [8560 B] Get:2187 http://deb.debian.org/debian sid/main amd64 libfltk1.3t64 amd64 1.3.8-6.1+b1 [556 kB] Get:2188 http://deb.debian.org/debian sid/main amd64 libfltk-images1.3t64 amd64 1.3.8-6.1+b1 [50.2 kB] Get:2189 http://deb.debian.org/debian sid/main amd64 libfont-afm-perl all 1.20-4 [13.1 kB] Get:2190 http://deb.debian.org/debian sid/main amd64 libfontbox-java all 1:1.8.16-5 [211 kB] Get:2191 http://deb.debian.org/debian sid/main amd64 libfreexl1 amd64 2.0.0-1+b3 [40.0 kB] Get:2192 http://deb.debian.org/debian sid/main amd64 libfreezethaw-perl all 0.5001-3 [16.0 kB] Get:2193 http://deb.debian.org/debian sid/main amd64 libfyba0t64 amd64 4.1.1-11+b1 [113 kB] Get:2194 http://deb.debian.org/debian sid/main amd64 libg20 amd64 0.72-13 [41.4 kB] Get:2195 http://deb.debian.org/debian sid/main amd64 libgail18t64 amd64 2.24.33-7 [19.0 kB] Get:2196 http://deb.debian.org/debian sid/main amd64 libgail-common amd64 2.24.33-7 [122 kB] Get:2197 http://deb.debian.org/debian sid/main amd64 libgd-svg-perl all 0.33-3 [59.9 kB] Get:2198 http://deb.debian.org/debian sid/main amd64 libgeos3.13.1 amd64 3.13.1-1 [970 kB] Get:2199 http://deb.debian.org/debian sid/main amd64 libgeos-c1t64 amd64 3.13.1-1 [102 kB] Get:2200 http://deb.debian.org/debian sid/main amd64 proj-data all 9.6.0-1 [6303 kB] Get:2201 http://deb.debian.org/debian sid/main amd64 libproj25 amd64 9.6.0-1 [1453 kB] Get:2202 http://deb.debian.org/debian sid/main amd64 libgeotiff5 amd64 1.7.4-1 [68.3 kB] Get:2203 http://deb.debian.org/debian sid/main amd64 libhdf4-0-alt amd64 4.3.0-1+b1 [269 kB] Get:2204 http://deb.debian.org/debian sid/main amd64 liburiparser1 amd64 0.9.8+dfsg-2 [45.5 kB] Get:2205 http://deb.debian.org/debian sid/main amd64 libkmlbase1t64 amd64 1.3.0-12+b2 [50.5 kB] Get:2206 http://deb.debian.org/debian sid/main amd64 libkmldom1t64 amd64 1.3.0-12+b2 [158 kB] Get:2207 http://deb.debian.org/debian sid/main amd64 libkmlengine1t64 amd64 1.3.0-12+b2 [80.1 kB] Get:2208 http://deb.debian.org/debian sid/main amd64 libnetcdf22 amd64 1:4.9.3-1 [517 kB] Get:2209 http://deb.debian.org/debian sid/main amd64 libodbc2 amd64 2.3.12-2 [151 kB] Get:2210 http://deb.debian.org/debian sid/main amd64 unixodbc-common all 2.3.12-2 [8640 B] Get:2211 http://deb.debian.org/debian sid/main amd64 libodbcinst2 amd64 2.3.12-2 [35.1 kB] Get:2212 http://deb.debian.org/debian sid/main amd64 libogdi4.1 amd64 4.1.1+ds-5 [217 kB] Get:2213 http://deb.debian.org/debian sid/main amd64 libgpgmepp6t64 amd64 1.24.2-1+b1 [341 kB] Get:2214 http://deb.debian.org/debian sid/main amd64 libpoppler147 amd64 25.03.0-2 [2035 kB] Get:2215 http://deb.debian.org/debian sid/main amd64 librttopo1 amd64 1.1.0-4 [179 kB] Get:2216 http://deb.debian.org/debian sid/main amd64 libspatialite8t64 amd64 5.1.0-3+b2 [1864 kB] Get:2217 http://deb.debian.org/debian sid/main amd64 libgdal36 amd64 3.10.2+dfsg-1+b4 [9267 kB] Get:2218 http://deb.debian.org/debian sid/main amd64 libgdk-pixbuf2.0-bin amd64 2.42.12+dfsg-2 [18.5 kB] Get:2219 http://deb.debian.org/debian sid/main amd64 libgenome0 amd64 1.3.11+svn20110227.4616-6+b2 [124 kB] Get:2220 http://deb.debian.org/debian sid/main amd64 libgetopt-java all 1.0.14+dfsg-6 [25.7 kB] Get:2221 http://deb.debian.org/debian sid/main amd64 libhttp-parser2.9 amd64 2.9.4-6+b2 [21.2 kB] Get:2222 http://deb.debian.org/debian sid/main amd64 libgit2-1.8 amd64 1.8.4+ds-3 [531 kB] Get:2223 http://deb.debian.org/debian sid/main amd64 libgkl-jni amd64 0.8.11+dfsg-2 [237 kB] Get:2224 http://deb.debian.org/debian sid/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get:2225 http://deb.debian.org/debian sid/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get:2226 http://deb.debian.org/debian sid/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB] Get:2227 http://deb.debian.org/debian sid/main amd64 libxdmcp-dev amd64 1:1.1.5-1 [44.3 kB] Get:2228 http://deb.debian.org/debian sid/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get:2229 http://deb.debian.org/debian sid/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB] Get:2230 http://deb.debian.org/debian sid/main amd64 libx11-dev amd64 2:1.8.12-1 [894 kB] Get:2231 http://deb.debian.org/debian sid/main amd64 libglx-dev amd64 1.7.0-1+b2 [15.8 kB] Get:2232 http://deb.debian.org/debian sid/main amd64 libgl-dev amd64 1.7.0-1+b2 [101 kB] Get:2233 http://deb.debian.org/debian sid/main amd64 libglib2.0-data all 2.84.0-2 [1286 kB] Get:2234 http://deb.debian.org/debian sid/main amd64 libopengl-dev amd64 1.7.0-1+b2 [5388 B] Get:2235 http://deb.debian.org/debian sid/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1+b3 [223 kB] Get:2236 http://deb.debian.org/debian sid/main amd64 libglut3.12 amd64 3.4.0-4 [139 kB] Get:2237 http://deb.debian.org/debian sid/main amd64 libxext-dev amd64 2:1.3.4-1+b3 [104 kB] Get:2238 http://deb.debian.org/debian sid/main amd64 libice-dev amd64 2:1.1.1-1 [73.8 kB] Get:2239 http://deb.debian.org/debian sid/main amd64 uuid-dev amd64 2.40.4-5 [47.8 kB] Get:2240 http://deb.debian.org/debian sid/main amd64 libsm-dev amd64 2:1.2.4-1 [37.7 kB] Get:2241 http://deb.debian.org/debian sid/main amd64 libxt-dev amd64 1:1.2.1-1.2+b2 [407 kB] Get:2242 http://deb.debian.org/debian sid/main amd64 libglut-dev amd64 3.4.0-4 [163 kB] Get:2243 http://deb.debian.org/debian sid/main amd64 libparse-recdescent-perl all 1.967015+dfsg-4 [147 kB] Get:2244 http://deb.debian.org/debian sid/main amd64 libxml-xpath-perl all 1.48-1 [71.0 kB] Get:2245 http://deb.debian.org/debian sid/main amd64 libgraphviz-perl all 2.24-1 [92.7 kB] Get:2246 http://deb.debian.org/debian sid/main amd64 libyaml-perl all 1.31-1 [64.8 kB] Get:2247 http://deb.debian.org/debian sid/main amd64 libgo-perl all 0.15-10 [265 kB] Get:2248 http://deb.debian.org/debian sid/main amd64 libjcsp-java all 1.1-rc4-3 [429 kB] Get:2249 http://deb.debian.org/debian sid/main amd64 libjsr166y-java all 1.7.0-3 [619 kB] Get:2250 http://deb.debian.org/debian sid/main amd64 libmultiverse-core-java all 0.7.0-6 [221 kB] Get:2251 http://deb.debian.org/debian sid/main amd64 libgpars-groovy-java all 1.2.1-11 [1119 kB] Get:2252 http://deb.debian.org/debian sid/main amd64 libgpg-error-l10n all 1.51-3 [114 kB] Get:2253 http://deb.debian.org/debian sid/main amd64 libheap-perl all 0.80-5 [34.3 kB] Get:2254 http://deb.debian.org/debian sid/main amd64 libset-object-perl amd64 1.42-1+b5 [37.6 kB] Get:2255 http://deb.debian.org/debian sid/main amd64 libgraph-perl all 1:0.9734-1 [110 kB] Get:2256 http://deb.debian.org/debian sid/main amd64 libparse-yapp-perl all 1.21-4 [41.5 kB] Get:2257 http://deb.debian.org/debian sid/main amd64 libgraph-readwrite-perl all 2.10-1 [45.2 kB] Get:2258 http://deb.debian.org/debian sid/main amd64 libgsl-dev amd64 2.8+dfsg-5 [1222 kB] Get:2259 http://deb.debian.org/debian sid/main amd64 libgtk-3-bin amd64 3.24.49-2 [86.2 kB] Get:2260 http://deb.debian.org/debian sid/main amd64 libgtk-4-bin amd64 4.18.2+ds-1 [3149 kB] Get:2261 http://deb.debian.org/debian sid/main amd64 libgtk-4-media-gstreamer amd64 4.18.2+ds-1 [93.1 kB] Get:2262 http://deb.debian.org/debian sid/main amd64 libgtk2.0-bin amd64 2.24.33-7 [12.2 kB] Get:2263 http://deb.debian.org/debian sid/main amd64 libgts-bin amd64 0.7.6+darcs121130-5.2+b1 [47.7 kB] Get:2264 http://deb.debian.org/debian sid/main amd64 libguard-perl amd64 1.023-2+b4 [15.6 kB] Get:2265 http://deb.debian.org/debian sid/main amd64 libgumbo3 amd64 0.13.0+dfsg-2 [111 kB] Get:2266 http://deb.debian.org/debian sid/main amd64 libharfbuzz-icu0 amd64 10.2.0-1+b1 [15.6 kB] Get:2267 http://deb.debian.org/debian sid/main amd64 libhdf5-fortran-310 amd64 1.14.5+repack-3 [111 kB] Get:2268 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-fortran-310 amd64 1.14.5+repack-3 [43.9 kB] Get:2269 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-cpp-310 amd64 1.14.5+repack-3 [24.4 kB] Get:2270 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3.1 [292 kB] Get:2271 http://deb.debian.org/debian sid/main amd64 libjpeg-dev amd64 1:2.1.5-3.1 [72.0 kB] Get:2272 http://deb.debian.org/debian sid/main amd64 libhdf5-dev amd64 1.14.5+repack-3 [3165 kB] Get:2273 http://deb.debian.org/debian sid/main amd64 libheif-plugin-aomenc amd64 1.19.7-1 [23.8 kB] Get:2274 http://deb.debian.org/debian sid/main amd64 libheif-plugin-x265 amd64 1.19.7-1 [22.0 kB] Get:2275 http://deb.debian.org/debian sid/main amd64 libhnswlib-dev all 0.8.0-1 [24.0 kB] Get:2276 http://deb.debian.org/debian sid/main amd64 libhtml-form-perl all 6.12-1 [32.3 kB] Get:2277 http://deb.debian.org/debian sid/main amd64 libhtml-format-perl all 2.16-2 [38.8 kB] Get:2278 http://deb.debian.org/debian sid/main amd64 libhtml-tableextract-perl all 2.15-2 [30.6 kB] Get:2279 http://deb.debian.org/debian sid/main amd64 liblzma-dev amd64 5.6.4-1 [323 kB] Get:2280 http://deb.debian.org/debian sid/main amd64 libhts-dev amd64 1.21+ds-1 [1733 kB] Get:2281 http://deb.debian.org/debian sid/main amd64 libhyphen0 amd64 2.8.8-7+b2 [30.7 kB] Get:2282 http://deb.debian.org/debian sid/main amd64 libicu-dev amd64 76.1-3 [10.8 MB] Get:2283 http://deb.debian.org/debian sid/main amd64 libio-compress-brotli-perl amd64 0.004001-2+b3 [16.9 kB] Get:2284 http://deb.debian.org/debian sid/main amd64 libstring-crc32-perl amd64 2.100-2+b3 [10.0 kB] Get:2285 http://deb.debian.org/debian sid/main amd64 libipc-shareable-perl all 1.13-1 [40.6 kB] Get:2286 http://deb.debian.org/debian sid/main amd64 libisospec++2t64 amd64 2.2.1-4.1+b3 [67.8 kB] Get:2287 http://deb.debian.org/debian sid/main amd64 libjama-java all 1.0.3-2 [31.3 kB] Get:2288 http://deb.debian.org/debian sid/main amd64 libjavascriptcoregtk-4.1-0 amd64 2.48.0-1+b1 [6937 kB] Get:2289 http://deb.debian.org/debian sid/main amd64 libjbcrypt-java all 0.4-3 [17.4 kB] Get:2290 http://deb.debian.org/debian sid/main amd64 libjcode-pm-perl amd64 2.06-1.1 [30.0 kB] Get:2291 http://deb.debian.org/debian sid/main amd64 libjcommander-java all 1.71-4 [73.0 kB] Get:2292 http://deb.debian.org/debian sid/main amd64 libjenkins-json-java all 2.4-jenkins-8+dfsg-1 [211 kB] Get:2293 http://deb.debian.org/debian sid/main amd64 libjim0.83 amd64 0.83-2 [147 kB] Get:2294 http://deb.debian.org/debian sid/main amd64 libvectorgraphics2d-java all 0.13-3 [107 kB] Get:2295 http://deb.debian.org/debian sid/main amd64 libjloda-java all 2.1+ds-3 [1377 kB] Get:2296 http://deb.debian.org/debian sid/main amd64 libjs-angularjs all 1.8.3-1 [817 kB] Get:2297 http://deb.debian.org/debian sid/main amd64 libjs-bootswatch all 3.3.7+dfsg2-1.1 [133 kB] Get:2298 http://deb.debian.org/debian sid/main amd64 libjs-filesaver all 2.0.4+dfsg+~2.0.5-2 [9776 B] Get:2299 http://deb.debian.org/debian sid/main amd64 libjs-jquery-hotkeys all 0.2.0-1 [12.6 kB] Get:2300 http://deb.debian.org/debian sid/main amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B] Get:2301 http://deb.debian.org/debian sid/main amd64 libjs-jquery-metadata all 12-4 [6532 B] Get:2302 http://deb.debian.org/debian sid/main amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [184 kB] Get:2303 http://deb.debian.org/debian sid/main amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB] Get:2304 http://deb.debian.org/debian sid/main amd64 libjs-lunr all 2.3.9~dfsg-2 [76.6 kB] Get:2305 http://deb.debian.org/debian sid/main amd64 libjs-remark-slide all 0.15.0+ds-2 [855 kB] Get:2306 http://deb.debian.org/debian sid/main amd64 libjs-sizzle all 2.3.10+ds+~2.3.6-1 [32.2 kB] Get:2307 http://deb.debian.org/debian sid/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get:2308 http://deb.debian.org/debian sid/main amd64 libjs-sphinxdoc all 8.1.3-5 [30.5 kB] Get:2309 http://deb.debian.org/debian sid/main amd64 libtypes-serialiser-perl all 1.01-1 [12.2 kB] Get:2310 http://deb.debian.org/debian sid/main amd64 libjson-xs-perl amd64 4.030-2+b5 [91.0 kB] Get:2311 http://deb.debian.org/debian sid/main amd64 libjung-free-java all 2.1.1-3 [1484 kB] Get:2312 http://deb.debian.org/debian sid/main amd64 libjxr0t64 amd64 1.2~git20170615.f752187-5.3 [171 kB] Get:2313 http://deb.debian.org/debian sid/main amd64 libjxr-tools amd64 1.2~git20170615.f752187-5.3 [16.9 kB] Get:2314 http://deb.debian.org/debian sid/main amd64 liblapack-dev amd64 3.12.1-2 [4998 kB] Get:2315 http://deb.debian.org/debian sid/main amd64 libldap-common all 2.6.9+dfsg-2 [34.8 kB] Get:2316 http://deb.debian.org/debian sid/main amd64 liblist-someutils-xs-perl amd64 0.58-3+b3 [34.5 kB] Get:2317 http://deb.debian.org/debian sid/main amd64 liblog-dispatch-perl all 2.71-1 [75.8 kB] Get:2318 http://deb.debian.org/debian sid/main amd64 liblog-log4perl-perl all 1.57-1 [367 kB] Get:2319 http://deb.debian.org/debian sid/main amd64 libmagick++-7.q16-5 amd64 8:7.1.1.43+dfsg1-1 [177 kB] Get:2320 http://deb.debian.org/debian sid/main amd64 libwmflite-0.2-7 amd64 0.2.13-1.1+b3 [75.6 kB] Get:2321 http://deb.debian.org/debian sid/main amd64 libmagickcore-7.q16-10-extra amd64 8:7.1.1.43+dfsg1-1 [72.1 kB] Get:2322 http://deb.debian.org/debian sid/main amd64 libsys-hostname-long-perl all 1.5-3 [11.6 kB] Get:2323 http://deb.debian.org/debian sid/main amd64 libmail-sendmail-perl all 0.80-3 [24.3 kB] Get:2324 http://deb.debian.org/debian sid/main amd64 libmanette-0.2-0 amd64 0.2.9-2 [35.9 kB] Get:2325 http://deb.debian.org/debian sid/main amd64 libmariadb-java all 2.7.6-1 [601 kB] Get:2326 http://deb.debian.org/debian sid/main amd64 libmath-cephes-perl amd64 0.5306-1 [177 kB] Get:2327 http://deb.debian.org/debian sid/main amd64 libmath-derivative-perl all 1.01-3 [8060 B] Get:2328 http://deb.debian.org/debian sid/main amd64 libmath-matrixreal-perl all 2.13-2 [68.6 kB] Get:2329 http://deb.debian.org/debian sid/main amd64 libmath-spline-perl all 0.02-4 [6808 B] Get:2330 http://deb.debian.org/debian sid/main amd64 libmbim-glib4 amd64 1.31.95-2 [218 kB] Get:2331 http://deb.debian.org/debian sid/main amd64 libmbim-proxy amd64 1.31.95-2 [8924 B] Get:2332 http://deb.debian.org/debian sid/main amd64 libmbim-utils amd64 1.31.95-2 [74.3 kB] Get:2333 http://deb.debian.org/debian sid/main amd64 libmuscle1 amd64 3.7+4565-8 [252 kB] Get:2334 http://deb.debian.org/debian sid/main amd64 libmems1t64 amd64 1.6.0+4725-11+b1 [702 kB] Get:2335 http://deb.debian.org/debian sid/main amd64 libmhash2 amd64 0.9.9.9-10 [92.4 kB] Get:2336 http://deb.debian.org/debian sid/main amd64 libmime-charset-perl all 1.013.1-2 [34.0 kB] Get:2337 http://deb.debian.org/debian sid/main amd64 libmime-lite-perl all 3.033-2 [68.7 kB] Get:2338 http://deb.debian.org/debian sid/main amd64 libmime-types-perl all 2.27-1 [68.3 kB] Get:2339 http://deb.debian.org/debian sid/main amd64 libminpack1 amd64 19961126+dfsg1-5+b2 [23.1 kB] Get:2340 http://deb.debian.org/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:2341 http://deb.debian.org/debian sid/main amd64 libopenmm8.1 amd64 8.1.2+dfsg-11 [1059 kB] Get:2342 http://deb.debian.org/debian sid/main amd64 libsimbody3.7 amd64 3.7+dfsg-4 [3363 kB] Get:2343 http://deb.debian.org/debian sid/main amd64 libsimtkmolmodel3.1t64 amd64 3.1.0-4.1+b3 [667 kB] Get:2344 http://deb.debian.org/debian sid/main amd64 libmmb4.0t64 amd64 4.0.0+dfsg-5 [1192 kB] Get:2345 http://deb.debian.org/debian sid/main amd64 libmodhmm0 amd64 1.0+dfsg-7 [79.8 kB] Get:2346 http://deb.debian.org/debian sid/main amd64 libmodule-pluggable-perl all 5.2-5 [23.0 kB] Get:2347 http://deb.debian.org/debian sid/main amd64 libmujs3 amd64 1.3.6-1 [125 kB] Get:2348 http://deb.debian.org/debian sid/main amd64 libmupdf25.1 amd64 1.25.1+ds1-5+b2 [31.3 MB] Get:2349 http://deb.debian.org/debian sid/main amd64 libnanoxml2-java all 2.2.3.dfsg-9 [62.6 kB] Get:2350 http://deb.debian.org/debian sid/main amd64 libncbi-wvdb3 amd64 3.0.9+dfsg-2 [1191 kB] Get:2351 http://deb.debian.org/debian sid/main amd64 libncbi6t64 amd64 6.1.20170106+dfsg2-5 [4103 kB] Get:2352 http://deb.debian.org/debian sid/main amd64 libncurses-dev amd64 6.5+20250216-2 [353 kB] Get:2353 http://deb.debian.org/debian sid/main amd64 libnet-dbus-perl amd64 1.2.0-2+b3 [168 kB] Get:2354 http://deb.debian.org/debian sid/main amd64 libnetpbm11t64 amd64 2:11.09.03-1 [184 kB] Get:2355 http://deb.debian.org/debian sid/main amd64 libngs-c++3 amd64 3.0.9+dfsg-7.1 [131 kB] Get:2356 http://deb.debian.org/debian sid/main amd64 libnl-genl-3-200 amd64 3.7.0-2 [18.1 kB] Get:2357 http://deb.debian.org/debian sid/main amd64 node-xtend all 4.0.2-3 [3932 B] Get:2358 http://deb.debian.org/debian sid/main amd64 node-corepack all 0.24.0-4 [704 kB] Get:2359 http://deb.debian.org/debian sid/main amd64 nodejs amd64 20.19.0+dfsg-1 [350 kB] Get:2360 http://deb.debian.org/debian sid/main amd64 node-acorn all 8.8.1+ds+~cs25.17.7-2 [128 kB] Get:2361 http://deb.debian.org/debian sid/main amd64 node-cjs-module-lexer all 1.2.3+dfsg-1 [30.6 kB] Get:2362 http://deb.debian.org/debian sid/main amd64 node-balanced-match all 2.0.0-1 [4872 B] Get:2363 http://deb.debian.org/debian sid/main amd64 node-brace-expansion all 2.0.1+~1.1.0-1 [7912 B] Get:2364 http://deb.debian.org/debian sid/main amd64 node-minimatch all 9.0.3-5 [76.7 kB] Get:2365 http://deb.debian.org/debian sid/main amd64 node-undici all 7.3.0+dfsg1+~cs24.12.11-1 [333 kB] Get:2366 http://deb.debian.org/debian sid/main amd64 libnode115 amd64 20.19.0+dfsg-1 [12.1 MB] Get:2367 http://deb.debian.org/debian sid/main amd64 libnss-mdns amd64 0.15.1-4+b1 [20.9 kB] Get:2368 http://deb.debian.org/debian sid/main amd64 libodbccr2 amd64 2.3.12-2 [18.1 kB] Get:2369 http://deb.debian.org/debian sid/main amd64 libole-storage-lite-perl all 0.22-1 [22.8 kB] Get:2370 http://deb.debian.org/debian sid/main amd64 libopenbabel7 amd64 3.1.1+dfsg-11+b3 [3253 kB] Get:2371 http://deb.debian.org/debian sid/main amd64 libwildmagic-common all 5.17+cleaned1-7 [7020 kB] Get:2372 http://deb.debian.org/debian sid/main amd64 libwildmagic5 amd64 5.17+cleaned1-7+b2 [1599 kB] Get:2373 http://deb.debian.org/debian sid/main amd64 openms-common all 2.6.0+cleaned1-4 [4291 kB] Get:2374 http://deb.debian.org/debian sid/main amd64 libopenms2.6.0 amd64 2.6.0+cleaned1-4+b5 [8318 kB] Get:2375 http://deb.debian.org/debian sid/main amd64 liboro-java all 2.0.8a-14 [70.5 kB] Get:2376 http://deb.debian.org/debian sid/main amd64 libpam-cap amd64 1:2.75-3 [15.6 kB] Get:2377 http://deb.debian.org/debian sid/main amd64 libqt6sql6 amd64 6.8.2+dfsg-5+b1 [144 kB] Get:2378 http://deb.debian.org/debian sid/main amd64 libqt6sql6-sqlite amd64 6.8.2+dfsg-5+b1 [66.3 kB] Get:2379 http://deb.debian.org/debian sid/main amd64 libpwizlite3t64 amd64 3.0.8-1+b2 [924 kB] Get:2380 http://deb.debian.org/debian sid/main amd64 libqt6xml6 amd64 6.8.2+dfsg-5+b1 [85.8 kB] Get:2381 http://deb.debian.org/debian sid/main amd64 libpappsomspp0 amd64 0.9.38-1+b2 [813 kB] Get:2382 http://deb.debian.org/debian sid/main amd64 libqcustomplot2.1-qt6 amd64 2.1.0+dfsg1-3.1+b5 [470 kB] Get:2383 http://deb.debian.org/debian sid/main amd64 libpappsomspp-widget0 amd64 0.9.38-1+b2 [131 kB] Get:2384 http://deb.debian.org/debian sid/main amd64 libparallel-forkmanager-perl all 2.03-1 [29.9 kB] Get:2385 http://deb.debian.org/debian sid/main amd64 libparasail8 amd64 2.6.2+dfsg-2 [1890 kB] Get:2386 http://deb.debian.org/debian sid/main amd64 libparasail-dev amd64 2.6.2+dfsg-2 [1504 kB] Get:2387 http://deb.debian.org/debian sid/main amd64 libpath-tiny-perl all 0.146-1 [56.2 kB] Get:2388 http://deb.debian.org/debian sid/main amd64 libpcg-cpp-dev all 0.98.1-2 [21.3 kB] Get:2389 http://deb.debian.org/debian sid/main amd64 libpcre2-posix3 amd64 10.45-1 [63.5 kB] Get:2390 http://deb.debian.org/debian sid/main amd64 libpcre2-dev amd64 10.45-1 [853 kB] Get:2391 http://deb.debian.org/debian sid/main amd64 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get:2392 http://deb.debian.org/debian sid/main amd64 libperl4-corelibs-perl all 0.005-1 [39.0 kB] Get:2393 http://deb.debian.org/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b3 [11.4 kB] Get:2394 http://deb.debian.org/debian sid/main amd64 libphobos2-ldc-shared106 amd64 1:1.36.0-2.1 [1277 kB] Get:2395 http://deb.debian.org/debian sid/main amd64 libpipewire-0.3-common all 1.4.1-1 [84.0 kB] Get:2396 http://deb.debian.org/debian sid/main amd64 libpng-dev amd64 1.6.47-1.1 [366 kB] Get:2397 http://deb.debian.org/debian sid/main amd64 libpng-tools amd64 1.6.47-1.1 [130 kB] Get:2398 http://deb.debian.org/debian sid/main amd64 libpod-coverage-perl all 0.23-2 [22.1 kB] Get:2399 http://deb.debian.org/debian sid/main amd64 libpolkit-agent-1-0 amd64 126-2 [26.4 kB] Get:2400 http://deb.debian.org/debian sid/main amd64 libpoppler-cpp2 amd64 25.03.0-2 [44.1 kB] Get:2401 http://deb.debian.org/debian sid/main amd64 libpopt0 amd64 1.19+dfsg-2 [43.8 kB] Get:2402 http://deb.debian.org/debian sid/main amd64 libpostscript-perl all 0.06-3.1 [26.0 kB] Get:2403 http://deb.debian.org/debian sid/main amd64 libprocessing-core-java all 1.2.1-3 [189 kB] Get:2404 http://deb.debian.org/debian sid/main amd64 libpwiz3t64 amd64 3.0.18342-4.1 [3110 kB] Get:2405 http://deb.debian.org/debian sid/main amd64 libpwiz-tools amd64 3.0.18342-4.1 [118 kB] Get:2406 http://deb.debian.org/debian sid/main amd64 libpython3.13-dev amd64 3.13.2-2 [5009 kB] Get:2407 http://deb.debian.org/debian sid/main amd64 libpython3-dev amd64 3.13.2-2 [10.3 kB] Get:2408 http://deb.debian.org/debian sid/main amd64 libqrtr-glib0 amd64 1.2.2-1+b2 [16.6 kB] Get:2409 http://deb.debian.org/debian sid/main amd64 libqmi-glib5 amd64 1.35.95-2 [866 kB] Get:2410 http://deb.debian.org/debian sid/main amd64 libqmi-proxy amd64 1.35.95-2 [9684 B] Get:2411 http://deb.debian.org/debian sid/main amd64 libqmi-utils amd64 1.35.95-2 [198 kB] Get:2412 http://deb.debian.org/debian sid/main amd64 libqpdf30 amd64 12.0.0-2 [972 kB] Get:2413 http://deb.debian.org/debian sid/main amd64 libqt5designer5 amd64 5.15.15-6 [2758 kB] Get:2414 http://deb.debian.org/debian sid/main amd64 libqt5sql5t64 amd64 5.15.15+dfsg-4+b1 [125 kB] Get:2415 http://deb.debian.org/debian sid/main amd64 libqt5help5 amd64 5.15.15-6 [151 kB] Get:2416 http://deb.debian.org/debian sid/main amd64 libqt5networkauth5 amd64 5.15.15-3 [66.2 kB] Get:2417 http://deb.debian.org/debian sid/main amd64 libqt5sql5-sqlite amd64 5.15.15+dfsg-4+b1 [59.7 kB] Get:2418 http://deb.debian.org/debian sid/main amd64 libqt5waylandclient5 amd64 5.15.15-2 [377 kB] Get:2419 http://deb.debian.org/debian sid/main amd64 libqt5waylandcompositor5 amd64 5.15.15-2 [361 kB] Get:2420 http://deb.debian.org/debian sid/main amd64 libqt5websockets5 amd64 5.15.15-2 [61.9 kB] Get:2421 http://deb.debian.org/debian sid/main amd64 libqt6qml6 amd64 6.8.2+dfsg-6 [1729 kB] Get:2422 http://deb.debian.org/debian sid/main amd64 libqt6qmlmodels6 amd64 6.8.2+dfsg-6 [275 kB] Get:2423 http://deb.debian.org/debian sid/main amd64 libqt6qmlworkerscript6 amd64 6.8.2+dfsg-6 [36.8 kB] Get:2424 http://deb.debian.org/debian sid/main amd64 libqt6qmlmeta6 amd64 6.8.2+dfsg-6 [65.0 kB] Get:2425 http://deb.debian.org/debian sid/main amd64 libqt6quick6 amd64 6.8.2+dfsg-6 [2258 kB] Get:2426 http://deb.debian.org/debian sid/main amd64 libqt6svgwidgets6 amd64 6.8.2-3 [18.8 kB] Get:2427 http://deb.debian.org/debian sid/main amd64 libqt6waylandclient6 amd64 6.8.2-3 [273 kB] Get:2428 http://deb.debian.org/debian sid/main amd64 libqt6waylandcompositor6 amd64 6.8.2-3 [434 kB] Get:2429 http://deb.debian.org/debian sid/main amd64 libqt6wlshellintegration6 amd64 6.8.2-3 [39.5 kB] Get:2430 http://deb.debian.org/debian sid/main amd64 librasqal3t64 amd64 0.9.33-2.1+b2 [191 kB] Get:2431 http://deb.debian.org/debian sid/main amd64 librdf0t64 amd64 1.0.17-4+b1 [107 kB] Get:2432 http://deb.debian.org/debian sid/main amd64 librdp-taxonomy-tree-java all 1.2.0-6 [18.1 kB] Get:2433 http://deb.debian.org/debian sid/main amd64 libreadline-dev amd64 8.2-6 [153 kB] Get:2434 http://deb.debian.org/debian sid/main amd64 libref-util-perl all 0.204-2 [17.4 kB] Get:2435 http://deb.debian.org/debian sid/main amd64 libref-util-xs-perl amd64 0.117-2+b4 [14.1 kB] Get:2436 http://deb.debian.org/debian sid/main amd64 libregexp-java all 1.5+dfsg-1 [37.3 kB] Get:2437 http://deb.debian.org/debian sid/main amd64 librg-reprof-bundle-perl all 1.0.1-9 [7479 kB] Get:2438 http://deb.debian.org/debian sid/main amd64 profphd-utils amd64 1.0.10-7 [251 kB] Get:2439 http://deb.debian.org/debian sid/main amd64 librg-utils-perl all 1.0.43-9 [107 kB] Get:2440 http://deb.debian.org/debian sid/main amd64 librocksdb9.10 amd64 9.10.0-1+b1 [3923 kB] Get:2441 http://deb.debian.org/debian sid/main amd64 librpc-xml-perl all 0.82-1 [165 kB] Get:2442 http://deb.debian.org/debian sid/main amd64 librsvg2-common amd64 2.60.0+dfsg-1 [154 kB] Get:2443 http://deb.debian.org/debian sid/main amd64 libsasl2-modules amd64 2.1.28+dfsg1-9 [66.7 kB] Get:2444 http://deb.debian.org/debian sid/main amd64 libset-scalar-perl all 1.29-3 [32.1 kB] Get:2445 http://deb.debian.org/debian sid/main amd64 libslow5-0t64 amd64 0.7.0+dfsg-3+b6 [66.7 kB] Get:2446 http://deb.debian.org/debian sid/main amd64 libsnp-sites1 amd64 2.5.1-2+b2 [14.8 kB] Get:2447 http://deb.debian.org/debian sid/main amd64 libtrove3-java all 3.0.3-5 [2146 kB] Get:2448 http://deb.debian.org/debian sid/main amd64 libsnpeff-java all 5.2.f+dfsg-1 [2156 kB] Get:2449 http://deb.debian.org/debian sid/main amd64 libsnpsift-java all 5.2.e+dfsg-2 [371 kB] Get:2450 http://deb.debian.org/debian sid/main amd64 libsombok3 amd64 2.4.0-2+b2 [31.8 kB] Get:2451 http://deb.debian.org/debian sid/main amd64 libsort-naturally-perl all 1.03-4 [13.1 kB] Get:2452 http://deb.debian.org/debian sid/main amd64 libspoa7.0.0 amd64 4.1.4-2+b1 [74.1 kB] Get:2453 http://deb.debian.org/debian sid/main amd64 libspreadsheet-writeexcel-perl all 2.40-4 [503 kB] Get:2454 http://deb.debian.org/debian sid/main amd64 libunicode-map-perl amd64 0.112-13+b5 [145 kB] Get:2455 http://deb.debian.org/debian sid/main amd64 libspreadsheet-parseexcel-perl all 0.6600-1 [126 kB] Get:2456 http://deb.debian.org/debian sid/main amd64 libsprng2 amd64 2.0a-16 [76.4 kB] Get:2457 http://deb.debian.org/debian sid/main amd64 libunicode-linebreak-perl amd64 0.0.20190101-1+b9 [96.1 kB] Get:2458 http://deb.debian.org/debian sid/main amd64 libtext-simpletable-perl all 2.07-1 [12.3 kB] Get:2459 http://deb.debian.org/debian sid/main amd64 libstatistics-pca-perl all 0.0.1-2 [15.0 kB] Get:2460 http://deb.debian.org/debian sid/main amd64 libstreamvbyte0 amd64 0.4.1-4+b1 [5868 B] Get:2461 http://deb.debian.org/debian sid/main amd64 libsuma1 amd64 1.0.36-5 [30.5 kB] Get:2462 http://deb.debian.org/debian sid/main amd64 libsvg-graph-perl all 0.02-4 [105 kB] Get:2463 http://deb.debian.org/debian sid/main amd64 libsvmloc0 amd64 1.0+dfsg-7 [13.3 kB] Get:2464 http://deb.debian.org/debian sid/main amd64 libswiss-perl all 1.80-1 [776 kB] Get:2465 http://deb.debian.org/debian sid/main amd64 libtasn1-doc all 4.20.0-2 [325 kB] Get:2466 http://deb.debian.org/debian sid/main amd64 libtbb-dev amd64 2022.0.0-2 [199 kB] Get:2467 http://deb.debian.org/debian sid/main amd64 libterraces0 amd64 0.0+git20200413.8af2e4c+dfsg-3 [76.3 kB] Get:2468 http://deb.debian.org/debian sid/main amd64 libtest-file-perl all 1.994-1 [24.8 kB] Get:2469 http://deb.debian.org/debian sid/main amd64 libtest2-suite-perl all 0.000163-1 [383 kB] Get:2470 http://deb.debian.org/debian sid/main amd64 libtest-files-perl all 0.26-1 [21.6 kB] Get:2471 http://deb.debian.org/debian sid/main amd64 libtest-output-perl all 1.035-1 [16.4 kB] Get:2472 http://deb.debian.org/debian sid/main amd64 libtest-pod-perl all 1.52-3 [12.6 kB] Get:2473 http://deb.debian.org/debian sid/main amd64 libtext-csv-xs-perl amd64 1.60-1 [139 kB] Get:2474 http://deb.debian.org/debian sid/main amd64 libtingea0 amd64 21-361-2+b2 [52.1 kB] Get:2475 http://deb.debian.org/debian sid/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [191 kB] Get:2476 http://deb.debian.org/debian sid/main amd64 libtype-tiny-xs-perl amd64 0.025-2+b1 [26.3 kB] Get:2477 http://deb.debian.org/debian sid/main amd64 libudunits2-data all 2.2.28-7 [26.4 kB] Get:2478 http://deb.debian.org/debian sid/main amd64 libudunits2-0 amd64 2.2.28-7 [58.1 kB] Get:2479 http://deb.debian.org/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2+b3 [20.4 kB] Get:2480 http://deb.debian.org/debian sid/main amd64 r-cran-gridbase all 0.4-7-5 [163 kB] Get:2481 http://deb.debian.org/debian sid/main amd64 libvcflib-tools amd64 1.0.12+dfsg-1 [608 kB] Get:2482 http://deb.debian.org/debian sid/main amd64 libvdpau-va-gl1 amd64 0.4.2-2 [74.3 kB] Get:2483 http://deb.debian.org/debian sid/main amd64 libvibrant6t64 amd64 6.1.20170106+dfsg2-5 [1313 kB] Get:2484 http://deb.debian.org/debian sid/main amd64 libvte-2.91-common amd64 0.80.0-1 [58.5 kB] Get:2485 http://deb.debian.org/debian sid/main amd64 libvte-2.91-0 amd64 0.80.0-1 [306 kB] Get:2486 http://deb.debian.org/debian sid/main amd64 libwcs8 amd64 8.4+ds-1 [288 kB] Get:2487 http://deb.debian.org/debian sid/main amd64 xdg-dbus-proxy amd64 0.1.6-1 [25.2 kB] Get:2488 http://deb.debian.org/debian sid/main amd64 libwebkit2gtk-4.1-0 amd64 2.48.0-1+b1 [22.5 MB] Get:2489 http://deb.debian.org/debian sid/main amd64 libwxgtk-gl3.2-1t64 amd64 3.2.6+dfsg-2 [84.1 kB] Get:2490 http://deb.debian.org/debian sid/main amd64 libx11-protocol-perl all 0.56-9 [120 kB] Get:2491 http://deb.debian.org/debian sid/main amd64 libxerial-sqlite-jdbc-jni amd64 3.46.1.3+dfsg-1 [17.3 kB] Get:2492 http://deb.debian.org/debian sid/main amd64 libxerial-sqlite-jdbc-java all 3.46.1.3+dfsg-1 [228 kB] Get:2493 http://deb.debian.org/debian sid/main amd64 libxml-checker-perl all 0.13-7 [40.6 kB] Get:2494 http://deb.debian.org/debian sid/main amd64 libxml-filter-buffertext-perl all 1.01-7 [7136 B] Get:2495 http://deb.debian.org/debian sid/main amd64 libxml-libxslt-perl amd64 2.003000-2+b1 [47.9 kB] Get:2496 http://deb.debian.org/debian sid/main amd64 libxml-sax-writer-perl all 0.57-3 [19.6 kB] Get:2497 http://deb.debian.org/debian sid/main amd64 libxmlrpc-lite-perl all 0.717-5 [22.4 kB] Get:2498 http://deb.debian.org/debian sid/main amd64 libxpertmass1 amd64 1.1.0-1 [238 kB] Get:2499 http://deb.debian.org/debian sid/main amd64 libxpertmassgui1 amd64 1.1.0-1 [98.3 kB] Get:2500 http://deb.debian.org/debian sid/main amd64 libyaml-cpp0.8 amd64 0.8.0+dfsg-7 [133 kB] Get:2501 http://deb.debian.org/debian sid/main amd64 libyaml-libyaml-perl amd64 0.903.0+ds-1 [35.4 kB] Get:2502 http://deb.debian.org/debian sid/main amd64 libyelp0 amd64 42.2-2 [160 kB] Get:2503 http://deb.debian.org/debian sid/main amd64 libzeus-jscl-java all 1.72-2 [129 kB] Get:2504 http://deb.debian.org/debian sid/main amd64 lighter amd64 1.1.3-1 [49.2 kB] Get:2505 http://deb.debian.org/debian sid/main amd64 lmodern all 2.005-1 [9480 kB] Get:2506 http://deb.debian.org/debian sid/main amd64 loki amd64 2.4.7.4-12 [372 kB] Get:2507 http://deb.debian.org/debian sid/main amd64 lsb-release all 12.1-1 [5912 B] Get:2508 http://deb.debian.org/debian sid/main amd64 ltrsift amd64 1.0.2-10 [99.0 kB] Get:2509 http://deb.debian.org/debian sid/main amd64 lucy amd64 1.20-6 [913 kB] Get:2510 http://deb.debian.org/debian sid/main amd64 luit amd64 2.0.20240910-1 [55.1 kB] Get:2511 http://deb.debian.org/debian sid/main amd64 samblaster amd64 0.1.26-4 [24.9 kB] Get:2512 http://deb.debian.org/debian sid/main amd64 lumpy-sv amd64 0.3.1+dfsg-7+b1 [210 kB] Get:2513 http://deb.debian.org/debian sid/main amd64 lynx-common all 2.9.2-1 [1193 kB] Get:2514 http://deb.debian.org/debian sid/main amd64 lynx amd64 2.9.2-1 [641 kB] Get:2515 http://deb.debian.org/debian sid/main amd64 python3-cykhash amd64 2.0.0-3+b3 [441 kB] Get:2516 http://deb.debian.org/debian sid/main amd64 python3-hmmlearn amd64 0.3.2-2+b2 [124 kB] Get:2517 http://deb.debian.org/debian sid/main amd64 macs amd64 3.0.2-1+b3 [3121 kB] Get:2518 http://deb.debian.org/debian sid/main amd64 python3-colorama all 0.4.6-4 [36.2 kB] Get:2519 http://deb.debian.org/debian sid/main amd64 python3-colorlog all 6.9.0-1 [27.5 kB] Get:2520 http://deb.debian.org/debian sid/main amd64 sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1023 kB] Get:2521 http://deb.debian.org/debian sid/main amd64 macsyfinder amd64 2.1.4-1+b1 [14.5 MB] Get:2522 http://deb.debian.org/debian sid/main amd64 maffilter amd64 1.3.1+dfsg-6 [266 kB] Get:2523 http://deb.debian.org/debian sid/main amd64 mailcap all 3.74 [32.8 kB] Get:2524 http://deb.debian.org/debian sid/main amd64 megan-ce all 6.21.1+dfsg-4 [37.1 MB] Get:2525 http://deb.debian.org/debian sid/main amd64 malt all 0.5.2-3 [419 kB] Get:2526 http://deb.debian.org/debian sid/main amd64 manpages-dev all 6.9.1-1 [2122 kB] Get:2527 http://deb.debian.org/debian sid/main amd64 r-cran-iterators all 1.0.14-1 [337 kB] Get:2528 http://deb.debian.org/debian sid/main amd64 r-cran-foreach all 1.5.2-1 [122 kB] Get:2529 http://deb.debian.org/debian sid/main amd64 r-cran-gam amd64 1.22-5-1 [395 kB] Get:2530 http://deb.debian.org/debian sid/main amd64 r-cran-inline all 0.3.21-1 [132 kB] Get:2531 http://deb.debian.org/debian sid/main amd64 seqtk amd64 1.4-2 [34.6 kB] Get:2532 http://deb.debian.org/debian sid/main amd64 r-cran-rcppgsl amd64 0.3.13-1+b1 [203 kB] Get:2533 http://deb.debian.org/debian sid/main amd64 mapdamage all 2.2.2+dfsg-1 [42.1 kB] Get:2534 http://deb.debian.org/debian sid/main amd64 mapsembler2 amd64 2.2.4+dfsg1-4 [724 kB] Get:2535 http://deb.debian.org/debian sid/main amd64 maq amd64 0.7.1-10 [302 kB] Get:2536 http://deb.debian.org/debian sid/main amd64 maqview amd64 0.2.5-12 [119 kB] Get:2537 http://deb.debian.org/debian sid/main amd64 massxpert2-data all 8.5.0-2 [104 kB] Get:2538 http://deb.debian.org/debian sid/main amd64 massxpert2 amd64 8.5.0-2 [805 kB] Get:2539 http://deb.debian.org/debian sid/main amd64 massxpert all 8.5.0-2 [10.6 kB] Get:2540 http://deb.debian.org/debian sid/main amd64 progressivemauve amd64 1.2.0+4713+dfsg-5+b3 [871 kB] Get:2541 http://deb.debian.org/debian sid/main amd64 mauve-aligner all 2.4.0+4736-6 [489 kB] Get:2542 http://deb.debian.org/debian sid/main amd64 mcaller all 1.0.3+git20210624.b415090-3 [19.0 kB] Get:2543 http://deb.debian.org/debian sid/main amd64 mcl amd64 1:22-282+ds-4 [477 kB] Get:2544 http://deb.debian.org/debian sid/main amd64 mecat2 amd64 0.0+git20200428.f54c542+ds-4 [763 kB] Get:2545 http://deb.debian.org/debian sid/main amd64 med-config all 3.8.2 [11.6 kB] Get:2546 http://deb.debian.org/debian sid/main amd64 med-tasks all 3.8.2 [8816 B] Get:2547 http://deb.debian.org/debian sid/main amd64 med-bio all 3.8.2 [14.5 kB] Get:2548 http://deb.debian.org/debian sid/main amd64 megadepth amd64 1.2.0-4+b1 [83.0 kB] Get:2549 http://deb.debian.org/debian sid/main amd64 megahit amd64 1.2.9-5 [1163 kB] Get:2550 http://deb.debian.org/debian sid/main amd64 melting all 5.2.0-2 [3666 kB] Get:2551 http://deb.debian.org/debian sid/main amd64 mesa-va-drivers amd64 25.0.2-1 [19.5 kB] Get:2552 http://deb.debian.org/debian sid/main amd64 mesa-vdpau-drivers amd64 25.0.2-1 [19.7 kB] Get:2553 http://deb.debian.org/debian sid/main amd64 mesa-vulkan-drivers amd64 25.0.2-1 [14.2 MB] Get:2554 http://deb.debian.org/debian sid/main amd64 metabat amd64 2.15-4+b1 [521 kB] Get:2555 http://deb.debian.org/debian sid/main amd64 metaeuk amd64 7-bba0d80+ds-1+b1 [4276 kB] Get:2556 http://deb.debian.org/debian sid/main amd64 metaphlan2-data all 2.6.0+ds-4 [204 MB] Get:2557 http://deb.debian.org/debian sid/main amd64 metaphlan all 4.0.4-1 [2011 kB] Get:2558 http://deb.debian.org/debian sid/main amd64 metastudent-data all 2.0.1-8 [225 MB] Get:2559 http://deb.debian.org/debian sid/main amd64 metastudent all 2.0.1-10 [6000 kB] Get:2560 http://deb.debian.org/debian sid/main amd64 python3-matplotlib-venn all 1.1.1-1 [37.9 kB] Get:2561 http://deb.debian.org/debian sid/main amd64 python3-pyqt5.sip amd64 12.17.0-1+b1 [61.6 kB] Get:2562 http://deb.debian.org/debian sid/main amd64 python3-pyqt5 amd64 5.15.11+dfsg-2 [2508 kB] Get:2563 http://deb.debian.org/debian sid/main amd64 microbegps all 1.0.0-7 [14.2 MB] Get:2564 http://deb.debian.org/debian sid/main amd64 nast-ier amd64 20101212+dfsg1-6 [20.3 kB] Get:2565 http://deb.debian.org/debian sid/main amd64 wigeon all 20101212+dfsg1-6 [28.6 kB] Get:2566 http://deb.debian.org/debian sid/main amd64 microbiomeutil all 20101212+dfsg1-6 [18.7 kB] Get:2567 http://deb.debian.org/debian sid/main amd64 mindthegap amd64 2.3.0-4+b1 [254 kB] Get:2568 http://deb.debian.org/debian sid/main amd64 minexpert2 amd64 9.6.0-1 [705 kB] Get:2569 http://deb.debian.org/debian sid/main amd64 minia amd64 3.2.6-4+b3 [405 kB] Get:2570 http://deb.debian.org/debian sid/main amd64 miniasm amd64 0.3+dfsg-4 [29.9 kB] Get:2571 http://deb.debian.org/debian sid/main amd64 minimac4 amd64 4.1.6-1 [251 kB] Get:2572 http://deb.debian.org/debian sid/main amd64 minimap amd64 0.2-8+b3 [26.9 kB] Get:2573 http://deb.debian.org/debian sid/main amd64 mipe all 1.1-9 [62.8 kB] Get:2574 http://deb.debian.org/debian sid/main amd64 python3-pybedtools amd64 0.10.0-4+b1 [12.1 MB] Get:2575 http://deb.debian.org/debian sid/main amd64 python3-mirtop all 0.4.28-3 [61.2 kB] Get:2576 http://deb.debian.org/debian sid/main amd64 mirtop all 0.4.28-3 [16.9 kB] Get:2577 http://deb.debian.org/debian sid/main amd64 mlv-smile amd64 1.47-8 [189 kB] Get:2578 http://deb.debian.org/debian sid/main amd64 mmb-common all 4.0.0+dfsg-5 [339 kB] Get:2579 http://deb.debian.org/debian sid/main amd64 mmb amd64 4.0.0+dfsg-5 [30.3 kB] Get:2580 http://deb.debian.org/debian sid/main amd64 mmseqs2 amd64 15-6f452+ds-2+b2 [24.2 MB] Get:2581 http://deb.debian.org/debian sid/main amd64 polkitd amd64 126-2 [122 kB] Get:2582 http://deb.debian.org/debian sid/main amd64 modemmanager amd64 1.23.95-2 [1063 kB] Get:2583 http://deb.debian.org/debian sid/main amd64 molequeue amd64 0.9.0-1+b3 [491 kB] Get:2584 http://deb.debian.org/debian sid/main amd64 mosdepth amd64 0.3.10+ds-1 [174 kB] Get:2585 http://deb.debian.org/debian sid/main amd64 mothur amd64 1.48.1-1 [5057 kB] Get:2586 http://deb.debian.org/debian sid/main amd64 mptp amd64 0.2.5-1 [84.2 kB] Get:2587 http://deb.debian.org/debian sid/main amd64 mrbayes amd64 3.2.7a-7+b1 [661 kB] Get:2588 http://deb.debian.org/debian sid/main amd64 python3-humanize all 4.12.1-1 [52.9 kB] Get:2589 http://deb.debian.org/debian sid/main amd64 python3-markdown all 3.7-2 [85.2 kB] Get:2590 http://deb.debian.org/debian sid/main amd64 python3-fastjsonschema all 2.21.1-1 [22.4 kB] Get:2591 http://deb.debian.org/debian sid/main amd64 python3-jupyter-core all 5.7.2-5 [35.3 kB] Get:2592 http://deb.debian.org/debian sid/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB] Get:2593 http://deb.debian.org/debian sid/main amd64 python3-tenacity all 8.4.2+really8.4.1-2 [46.0 kB] Get:2594 http://deb.debian.org/debian sid/main amd64 python3-plotly all 5.20.0+dfsg-1 [2726 kB] Get:2595 http://deb.debian.org/debian sid/main amd64 python3-pyaml-env all 1.2.1-2 [9032 B] Get:2596 http://deb.debian.org/debian sid/main amd64 python3-rich-click all 1.6.0-2 [21.2 kB] Get:2597 http://deb.debian.org/debian sid/main amd64 python3-colormath all 3.0.0-4 [34.7 kB] Get:2598 http://deb.debian.org/debian sid/main amd64 python3-spectra all 0.1.0-1 [16.6 kB] Get:2599 http://deb.debian.org/debian sid/main amd64 python3-lzstring all 1.0.4-3 [5544 B] Get:2600 http://deb.debian.org/debian sid/main amd64 multiqc all 1.21+dfsg-2 [781 kB] Get:2601 http://deb.debian.org/debian sid/main amd64 mupdf-tools amd64 1.25.1+ds1-5+b2 [188 kB] Get:2602 http://deb.debian.org/debian sid/main amd64 r-cran-gtools amd64 3.9.5-1 [362 kB] Get:2603 http://deb.debian.org/debian sid/main amd64 r-cran-bitops amd64 1.0-9-1 [30.7 kB] Get:2604 http://deb.debian.org/debian sid/main amd64 r-cran-catools amd64 1.18.3-1 [207 kB] Get:2605 http://deb.debian.org/debian sid/main amd64 r-cran-kernsmooth amd64 2.23-26-1 [93.0 kB] Get:2606 http://deb.debian.org/debian sid/main amd64 r-cran-gdata all 3.0.1-1 [509 kB] Get:2607 http://deb.debian.org/debian sid/main amd64 r-cran-gplots all 3.2.0-1 [501 kB] Get:2608 http://deb.debian.org/debian sid/main amd64 r-cran-rocr all 1.0-11-3 [457 kB] Get:2609 http://deb.debian.org/debian sid/main amd64 murasaki-common all 1.68.6-14 [117 kB] Get:2610 http://deb.debian.org/debian sid/main amd64 murasaki amd64 1.68.6-14+b1 [645 kB] Get:2611 http://deb.debian.org/debian sid/main amd64 muscle amd64 1:5.1.0-1 [297 kB] Get:2612 http://deb.debian.org/debian sid/main amd64 mustang amd64 3.2.4-1 [105 kB] Get:2613 http://deb.debian.org/debian sid/main amd64 nanofilt all 2.8.0-1 [12.4 kB] Get:2614 http://deb.debian.org/debian sid/main amd64 python3-mappy amd64 2.27+dfsg-1+b3 [149 kB] Get:2615 http://deb.debian.org/debian sid/main amd64 nanolyse amd64 1.2.0-4 [25.3 kB] Get:2616 http://deb.debian.org/debian sid/main amd64 r-cran-reshape all 0.8.9-1 [169 kB] Get:2617 http://deb.debian.org/debian sid/main amd64 texlive-latex-base all 2024.20250309-1 [1294 kB] Get:2618 http://deb.debian.org/debian sid/main amd64 nanook all 1.33+dfsg-6 [196 kB] Get:2619 http://deb.debian.org/debian sid/main amd64 nanopolish amd64 0.14.0-1+b3 [2202 kB] Get:2620 http://deb.debian.org/debian sid/main amd64 python3-wrapt amd64 1.15.0-4+b1 [43.6 kB] Get:2621 http://deb.debian.org/debian sid/main amd64 python3-deprecated all 1.2.18-1 [14.8 kB] Get:2622 http://deb.debian.org/debian sid/main amd64 python3-nanomath all 1.2.1+ds-1 [8120 B] Get:2623 http://deb.debian.org/debian sid/main amd64 python3-nanoget all 1.19.3-1 [11.7 kB] Get:2624 http://deb.debian.org/debian sid/main amd64 python3-nanostat all 1.4.0-3 [8576 B] Get:2625 http://deb.debian.org/debian sid/main amd64 nanostat all 1.4.0-3 [2748 B] Get:2626 http://deb.debian.org/debian sid/main amd64 nanosv all 1.2.4+git20190409.c1ae30c-7 [2872 kB] Get:2627 http://deb.debian.org/debian sid/main amd64 ncbi-acc-download all 0.2.8-3 [13.0 kB] Get:2628 http://deb.debian.org/debian sid/main amd64 ncbi-cn3d amd64 3.0.20170106+dfsg2-5 [32.6 kB] Get:2629 http://deb.debian.org/debian sid/main amd64 ncbi-entrez-direct amd64 19.2.20230331+dfsg-3+b5 [7337 kB] Get:2630 http://deb.debian.org/debian sid/main amd64 ncbi-epcr amd64 2.3.12-1-10 [174 kB] Get:2631 http://deb.debian.org/debian sid/main amd64 ncbi-seg amd64 0.0.20000620-7 [83.9 kB] Get:2632 http://deb.debian.org/debian sid/main amd64 ncbi-tools-bin amd64 6.1.20170106+dfsg2-5 [1930 kB] Get:2633 http://deb.debian.org/debian sid/main amd64 ncbi-tools-x11 amd64 6.1.20170106+dfsg2-5 [1143 kB] Get:2634 http://deb.debian.org/debian sid/main amd64 ncl-tools amd64 2.1.21+git20210811.b1213a7-6 [190 kB] Get:2635 http://deb.debian.org/debian sid/main amd64 ncoils amd64 2002-9 [22.2 kB] Get:2636 http://deb.debian.org/debian sid/main amd64 neobio all 0.0.20030929-6 [292 kB] Get:2637 http://deb.debian.org/debian sid/main amd64 netpbm amd64 2:11.09.03-1 [2081 kB] Get:2638 http://deb.debian.org/debian sid/main amd64 ngmlr amd64 0.2.7+git20210816.a2a31fb+dfsg-2+b1 [690 kB] Get:2639 http://deb.debian.org/debian sid/main amd64 njplot amd64 2.4-9+b1 [96.1 kB] Get:2640 http://deb.debian.org/debian sid/main amd64 node-clipboard all 2.0.11+ds+~cs9.6.11-1 [21.0 kB] Get:2641 http://deb.debian.org/debian sid/main amd64 node-fortawesome-fontawesome-free all 6.7.2+ds1-1 [1521 kB] Get:2642 http://deb.debian.org/debian sid/main amd64 node-highlight.js all 9.18.5+dfsg1-2 [333 kB] Get:2643 http://deb.debian.org/debian sid/main amd64 node-jquery all 3.6.1+dfsg+~3.5.14-1 [160 kB] Get:2644 http://deb.debian.org/debian sid/main amd64 node-jquery-ui all 1.13.2+dfsg-1 [242 kB] Get:2645 http://deb.debian.org/debian sid/main amd64 node-natural-sort all 1.0.0-5 [4296 B] Get:2646 http://deb.debian.org/debian sid/main amd64 node-thenby all 1.3.4+git20200720.0fd165a+ds-5 [5084 B] Get:2647 http://deb.debian.org/debian sid/main amd64 nodejs-doc all 20.19.0+dfsg-1 [3873 kB] Get:2648 http://deb.debian.org/debian sid/main amd64 profnet-norsnet amd64 1.0.22-8 [44.7 kB] Get:2649 http://deb.debian.org/debian sid/main amd64 norsnet all 1.0.17-7 [44.3 kB] Get:2650 http://deb.debian.org/debian sid/main amd64 norsp all 1.0.6-7 [279 kB] Get:2651 http://deb.debian.org/debian sid/main amd64 ntcard amd64 1.2.2+dfsg-9 [42.1 kB] Get:2652 http://deb.debian.org/debian sid/main amd64 nxtrim amd64 0.4.3+dfsg-4 [37.2 kB] Get:2653 http://deb.debian.org/debian sid/main amd64 obitools amd64 3.0.1~b26+dfsg-4 [5776 kB] Get:2654 http://deb.debian.org/debian sid/main amd64 openjfx-source all 11.0.11+1-6 [6075 kB] Get:2655 http://deb.debian.org/debian sid/main amd64 topp amd64 2.6.0+cleaned1-4+b5 [3214 kB] Get:2656 http://deb.debian.org/debian sid/main amd64 openms all 2.6.0+cleaned1-4 [53.6 kB] Get:2657 http://deb.debian.org/debian sid/main amd64 optimir all 1.2-2 [1026 kB] Get:2658 http://deb.debian.org/debian sid/main amd64 pal2nal all 14.1-3 [17.8 kB] Get:2659 http://deb.debian.org/debian sid/main amd64 python3-configargparse all 1.7-2 [31.4 kB] Get:2660 http://deb.debian.org/debian sid/main amd64 python3-setproctitle amd64 1.3.5-1 [18.4 kB] Get:2661 http://deb.debian.org/debian sid/main amd64 phylip amd64 1:3.697+dfsg-4 [957 kB] Get:2662 http://deb.debian.org/debian sid/main amd64 radiant all 2.8.1+dfsg-2 [181 kB] Get:2663 http://deb.debian.org/debian sid/main amd64 paleomix amd64 1.3.8-2 [984 kB] Get:2664 http://deb.debian.org/debian sid/main amd64 paml amd64 4.9j+dfsg-6 [723 kB] Get:2665 http://deb.debian.org/debian sid/main amd64 paraclu amd64 10-1 [14.0 kB] Get:2666 http://deb.debian.org/debian sid/main amd64 parafly amd64 0.1.0-5 [18.8 kB] Get:2667 http://deb.debian.org/debian sid/main amd64 parasail amd64 2.6.2+dfsg-2 [66.3 kB] Get:2668 http://deb.debian.org/debian sid/main amd64 parsinsert amd64 1.04-15 [69.7 kB] Get:2669 http://deb.debian.org/debian sid/main amd64 python3-pyspoa amd64 0.2.1-2+b1 [65.3 kB] Get:2670 http://deb.debian.org/debian sid/main amd64 python3-tqdm all 4.67.1-3 [90.3 kB] Get:2671 http://deb.debian.org/debian sid/main amd64 phipack amd64 0.0.20160614-5 [54.8 kB] Get:2672 http://deb.debian.org/debian sid/main amd64 time amd64 1.9-0.2 [50.8 kB] Get:2673 http://deb.debian.org/debian sid/main amd64 parsnp amd64 2.1.3+dfsg-1 [214 kB] Get:2674 http://deb.debian.org/debian sid/main amd64 patman amd64 1.2.2+dfsg-8+b1 [27.9 kB] Get:2675 http://deb.debian.org/debian sid/main amd64 pbbamtools amd64 2.4.0+dfsg-1+b4 [137 kB] Get:2676 http://deb.debian.org/debian sid/main amd64 pbdagcon amd64 0.3+git20180411.c14c422+dfsg-9 [365 kB] Get:2677 http://deb.debian.org/debian sid/main amd64 python3-pbsuite-utils all 15.8.24+dfsg-8 [509 kB] Get:2678 http://deb.debian.org/debian sid/main amd64 pbjelly all 15.8.24+dfsg-8 [970 kB] Get:2679 http://deb.debian.org/debian sid/main amd64 python3-pbbanana all 15.8.24+dfsg-8 [20.1 kB] Get:2680 http://deb.debian.org/debian sid/main amd64 python3-sortedcontainers all 2.4.0-2 [31.9 kB] Get:2681 http://deb.debian.org/debian sid/main amd64 python3-intervaltree all 3.0.2-1.1 [26.3 kB] Get:2682 http://deb.debian.org/debian sid/main amd64 python3-intervaltree-bio all 1.0.1-4 [8640 B] Get:2683 http://deb.debian.org/debian sid/main amd64 pbhoney all 15.8.24+dfsg-8 [1057 kB] Get:2684 http://deb.debian.org/debian sid/main amd64 pbsim amd64 1.0.3+git20180330.e014b1d+dfsg-3 [25.5 kB] Get:2685 http://deb.debian.org/debian sid/main amd64 pbsuite all 15.8.24+dfsg-8 [5460 B] Get:2686 http://deb.debian.org/debian sid/main amd64 python3-roman all 5.0-1 [10.6 kB] Get:2687 http://deb.debian.org/debian sid/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get:2688 http://deb.debian.org/debian sid/main amd64 python3-pdbx all 2.0.1-2 [17.4 kB] Get:2689 http://deb.debian.org/debian sid/main amd64 python3-propka all 3.5.1-2 [68.2 kB] Get:2690 http://deb.debian.org/debian sid/main amd64 python3-pdb2pqr all 3.6.1+dfsg-1 [136 kB] Get:2691 http://deb.debian.org/debian sid/main amd64 pdb2pqr all 3.6.1+dfsg-1 [11.5 kB] Get:2692 http://deb.debian.org/debian sid/main amd64 perl-doc all 5.40.1-2 [8250 kB] Get:2693 http://deb.debian.org/debian sid/main amd64 perl-tk amd64 1:804.036+dfsg1-4 [1987 kB] Get:2694 http://deb.debian.org/debian sid/main amd64 perlprimer all 1.2.4-2 [100 kB] Get:2695 http://deb.debian.org/debian sid/main amd64 perm amd64 0.4.0-8+b1 [127 kB] Get:2696 http://deb.debian.org/debian sid/main amd64 pftools amd64 3.2.12-1 [24.8 MB] Get:2697 http://deb.debian.org/debian sid/main amd64 phast amd64 1.7+dfsg-2 [3563 kB] Get:2698 http://deb.debian.org/debian sid/main amd64 phybin amd64 0.3-6 [1653 kB] Get:2699 http://deb.debian.org/debian sid/main amd64 phylonium amd64 1.7-3 [300 kB] Get:2700 http://deb.debian.org/debian sid/main amd64 physamp amd64 1.1.0-5 [187 kB] Get:2701 http://deb.debian.org/debian sid/main amd64 phyutility amd64 2.7.3+dfsg-4 [894 kB] Get:2702 http://deb.debian.org/debian sid/main amd64 phyx amd64 1.3.2+ds-1 [2392 kB] Get:2703 http://deb.debian.org/debian sid/main amd64 python3-watchdog all 6.0.0-1 [133 kB] Get:2704 http://deb.debian.org/debian sid/main amd64 python3-picopore all 1.2.0-3 [15.4 kB] Get:2705 http://deb.debian.org/debian sid/main amd64 picopore all 1.2.0-3 [10.5 kB] Get:2706 http://deb.debian.org/debian sid/main amd64 rna-star amd64 2.7.11b+dfsg-2+b1 [3545 kB] Get:2707 http://deb.debian.org/debian sid/main amd64 python3-deeptoolsintervals amd64 0.1.9-3+b11 [52.2 kB] Get:2708 http://deb.debian.org/debian sid/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB] Get:2709 http://deb.debian.org/debian sid/main amd64 sphinx-common all 8.1.3-5 [617 kB] Get:2710 http://deb.debian.org/debian sid/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get:2711 http://deb.debian.org/debian sid/main amd64 python-babel-localedata all 2.17.0-1 [6050 kB] Get:2712 http://deb.debian.org/debian sid/main amd64 python3-babel all 2.17.0-1 [117 kB] Get:2713 http://deb.debian.org/debian sid/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get:2714 http://deb.debian.org/debian sid/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get:2715 http://deb.debian.org/debian sid/main amd64 python3-sphinx all 8.1.3-5 [468 kB] Get:2716 http://deb.debian.org/debian sid/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB] Get:2717 http://deb.debian.org/debian sid/main amd64 python3-numpydoc all 1.8.0-1 [51.4 kB] Get:2718 http://deb.debian.org/debian sid/main amd64 python3-py2bit amd64 0.3.3-1+b1 [21.4 kB] Get:2719 http://deb.debian.org/debian sid/main amd64 python3-deeptools all 3.5.6+dfsg-1 [150 kB] Get:2720 http://deb.debian.org/debian sid/main amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2061 kB] Get:2721 http://deb.debian.org/debian sid/main amd64 r-bioc-iranges amd64 2.40.1-2 [2309 kB] Get:2722 http://deb.debian.org/debian sid/main amd64 r-cran-curl amd64 6.2.1+dfsg-1 [195 kB] Get:2723 http://deb.debian.org/debian sid/main amd64 r-cran-sys amd64 3.4.3-1 [44.4 kB] Get:2724 http://deb.debian.org/debian sid/main amd64 r-cran-askpass amd64 1.2.1-1 [24.2 kB] Get:2725 http://deb.debian.org/debian sid/main amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [402 kB] Get:2726 http://deb.debian.org/debian sid/main amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] Get:2727 http://deb.debian.org/debian sid/main amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.3 kB] Get:2728 http://deb.debian.org/debian sid/main amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] Get:2729 http://deb.debian.org/debian sid/main amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3848 kB] Get:2730 http://deb.debian.org/debian sid/main amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [9968 B] Get:2731 http://deb.debian.org/debian sid/main amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] Get:2732 http://deb.debian.org/debian sid/main amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2092 kB] Get:2733 http://deb.debian.org/debian sid/main amd64 r-bioc-matrixgenerics all 1.18.1-1 [449 kB] Get:2734 http://deb.debian.org/debian sid/main amd64 r-bioc-biobase amd64 2.66.0-2 [2316 kB] Get:2735 http://deb.debian.org/debian sid/main amd64 r-cran-abind all 1.4-8-1 [68.1 kB] Get:2736 http://deb.debian.org/debian sid/main amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [702 kB] Get:2737 http://deb.debian.org/debian sid/main amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-1 [1372 kB] Get:2738 http://deb.debian.org/debian sid/main amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2076 kB] Get:2739 http://deb.debian.org/debian sid/main amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1116 kB] Get:2740 http://deb.debian.org/debian sid/main amd64 r-cran-formatr all 1.14-2 [152 kB] Get:2741 http://deb.debian.org/debian sid/main amd64 r-cran-lambda.r all 1.2.4-2 [118 kB] Get:2742 http://deb.debian.org/debian sid/main amd64 r-cran-futile.options all 1.0.1-3 [20.0 kB] Get:2743 http://deb.debian.org/debian sid/main amd64 r-cran-futile.logger all 1.4.3-4 [98.4 kB] Get:2744 http://deb.debian.org/debian sid/main amd64 r-cran-snow all 1:0.4.4-2 [98.9 kB] Get:2745 http://deb.debian.org/debian sid/main amd64 r-cran-bh all 1.84.0-1 [5912 B] Get:2746 http://deb.debian.org/debian sid/main amd64 r-bioc-biocparallel amd64 1.40.0-2 [1326 kB] Get:2747 http://deb.debian.org/debian sid/main amd64 r-cran-locfit amd64 1.5-9.12-1 [513 kB] Get:2748 http://deb.debian.org/debian sid/main amd64 r-cran-rcpparmadillo amd64 14.4.0-1-1 [868 kB] Get:2749 http://deb.debian.org/debian sid/main amd64 r-bioc-deseq2 amd64 1.46.0+dfsg-2 [1287 kB] Get:2750 http://deb.debian.org/debian sid/main amd64 r-cran-xml amd64 3.99-0.18-1 [1762 kB] Get:2751 http://deb.debian.org/debian sid/main amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.4 MB] Get:2752 http://deb.debian.org/debian sid/main amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1335 kB] Get:2753 http://deb.debian.org/debian sid/main amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3600 kB] Get:2754 http://deb.debian.org/debian sid/main amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2161 kB] Get:2755 http://deb.debian.org/debian sid/main amd64 r-bioc-biocio all 1.16.0+dfsg-2 [210 kB] Get:2756 http://deb.debian.org/debian sid/main amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [799 kB] Get:2757 http://deb.debian.org/debian sid/main amd64 r-cran-rjson amd64 0.2.23-1 [100.0 kB] Get:2758 http://deb.debian.org/debian sid/main amd64 r-cran-restfulr amd64 0.0.15-1 [382 kB] Get:2759 http://deb.debian.org/debian sid/main amd64 r-bioc-rtracklayer amd64 1.66.0-2 [5213 kB] Get:2760 http://deb.debian.org/debian sid/main amd64 r-bioc-tximport all 1.34.0+dfsg-2 [91.2 kB] Get:2761 http://deb.debian.org/debian sid/main amd64 r-cran-corrplot all 0.95-1 [135 kB] Get:2762 http://deb.debian.org/debian sid/main amd64 r-cran-lazyeval amd64 0.2.2-1+b1 [142 kB] Get:2763 http://deb.debian.org/debian sid/main amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [175 kB] Get:2764 http://deb.debian.org/debian sid/main amd64 r-cran-dt all 0.33+dfsg-1 [248 kB] Get:2765 http://deb.debian.org/debian sid/main amd64 r-cran-ggrepel amd64 0.9.6-1 [265 kB] Get:2766 http://deb.debian.org/debian sid/main amd64 r-cran-ggsci all 3.2.0-1 [2103 kB] Get:2767 http://deb.debian.org/debian sid/main amd64 r-cran-cowplot all 1.1.3+dfsg-1 [638 kB] Get:2768 http://deb.debian.org/debian sid/main amd64 r-cran-ggsignif all 0.6.4-1 [589 kB] Get:2769 http://deb.debian.org/debian sid/main amd64 r-cran-polynom all 1.4-1+dfsg-1 [92.5 kB] Get:2770 http://deb.debian.org/debian sid/main amd64 r-cran-broom all 1.0.7+dfsg-1 [1846 kB] Get:2771 http://deb.debian.org/debian sid/main amd64 r-cran-cardata all 3.0.5-1 [1797 kB] Get:2772 http://deb.debian.org/debian sid/main amd64 r-cran-boot all 1.3-31-1 [639 kB] Get:2773 http://deb.debian.org/debian sid/main amd64 r-cran-minqa amd64 1.2.8-1 [118 kB] Get:2774 http://deb.debian.org/debian sid/main amd64 r-cran-nloptr amd64 2.2.1-1 [254 kB] Get:2775 http://deb.debian.org/debian sid/main amd64 r-cran-rbibutils amd64 2.3-1 [948 kB] Get:2776 http://deb.debian.org/debian sid/main amd64 r-cran-rdpack all 2.6.3-1 [638 kB] Get:2777 http://deb.debian.org/debian sid/main amd64 r-cran-reformulas all 0.4.0-1 [92.8 kB] Get:2778 http://deb.debian.org/debian sid/main amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] Get:2779 http://deb.debian.org/debian sid/main amd64 r-cran-lme4 amd64 1.1-36-1 [4104 kB] Get:2780 http://deb.debian.org/debian sid/main amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] Get:2781 http://deb.debian.org/debian sid/main amd64 r-cran-deriv all 4.1.6-1 [151 kB] Get:2782 http://deb.debian.org/debian sid/main amd64 r-cran-modelr all 0.1.11-1 [204 kB] Get:2783 http://deb.debian.org/debian sid/main amd64 r-cran-microbenchmark amd64 1.5.0-1 [67.1 kB] Get:2784 http://deb.debian.org/debian sid/main amd64 r-cran-doby all 4.6.25-1 [4775 kB] Get:2785 http://deb.debian.org/debian sid/main amd64 r-cran-pbkrtest all 0.5.3-1 [180 kB] Get:2786 http://deb.debian.org/debian sid/main amd64 r-cran-sparsem amd64 1.84-2-1+b1 [794 kB] Get:2787 http://deb.debian.org/debian sid/main amd64 r-cran-matrixmodels all 0.5-3-1 [364 kB] Get:2788 http://deb.debian.org/debian sid/main amd64 r-cran-class amd64 7.3-23-1 [89.7 kB] Get:2789 http://deb.debian.org/debian sid/main amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] Get:2790 http://deb.debian.org/debian sid/main amd64 r-cran-e1071 amd64 1.7-16-1 [562 kB] Get:2791 http://deb.debian.org/debian sid/main amd64 r-cran-modelmetrics amd64 1.2.2.2-1+b1 [125 kB] Get:2792 http://deb.debian.org/debian sid/main amd64 r-cran-proc amd64 1.18.5-1 [987 kB] Get:2793 http://deb.debian.org/debian sid/main amd64 r-cran-tzdb amd64 0.5.0-1 [515 kB] Get:2794 http://deb.debian.org/debian sid/main amd64 r-cran-clock amd64 0.7.2-1 [1823 kB] Get:2795 http://deb.debian.org/debian sid/main amd64 r-cran-gower amd64 1.0.2-1 [209 kB] Get:2796 http://deb.debian.org/debian sid/main amd64 r-cran-sparsevctrs amd64 0.2.0-1+b1 [177 kB] Get:2797 http://deb.debian.org/debian sid/main amd64 r-cran-hardhat all 1.4.1+dfsg-1 [697 kB] Get:2798 http://deb.debian.org/debian sid/main amd64 r-cran-shape all 1.4.6.1-1 [752 kB] Get:2799 http://deb.debian.org/debian sid/main amd64 r-cran-diagram all 1.6.5-2 [656 kB] Get:2800 http://deb.debian.org/debian sid/main amd64 r-cran-globals all 0.16.3-1 [120 kB] Get:2801 http://deb.debian.org/debian sid/main amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] Get:2802 http://deb.debian.org/debian sid/main amd64 r-cran-parallelly amd64 1.42.0-1 [541 kB] Get:2803 http://deb.debian.org/debian sid/main amd64 r-cran-future all 1.34.0+dfsg-1 [649 kB] Get:2804 http://deb.debian.org/debian sid/main amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB] Get:2805 http://deb.debian.org/debian sid/main amd64 r-cran-progressr all 0.15.1-1 [352 kB] Get:2806 http://deb.debian.org/debian sid/main amd64 r-cran-squarem all 2021.1-1 [179 kB] Get:2807 http://deb.debian.org/debian sid/main amd64 r-cran-lava all 1.8.1+dfsg-1 [2230 kB] Get:2808 http://deb.debian.org/debian sid/main amd64 r-cran-prodlim amd64 2024.06.25-1 [416 kB] Get:2809 http://deb.debian.org/debian sid/main amd64 r-cran-ipred amd64 0.9-15-1 [387 kB] Get:2810 http://deb.debian.org/debian sid/main amd64 r-cran-timechange amd64 0.3.0-1 [173 kB] Get:2811 http://deb.debian.org/debian sid/main amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1013 kB] Get:2812 http://deb.debian.org/debian sid/main amd64 r-cran-timedate amd64 4041.110-1 [1211 kB] Get:2813 http://deb.debian.org/debian sid/main amd64 r-cran-recipes all 1.1.0+dfsg-1 [2047 kB] Get:2814 http://deb.debian.org/debian sid/main amd64 r-cran-reshape2 amd64 1.4.4-2 [114 kB] Get:2815 http://deb.debian.org/debian sid/main amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3471 kB] Get:2816 http://deb.debian.org/debian sid/main amd64 r-cran-conquer amd64 1.3.3-1 [471 kB] Get:2817 http://deb.debian.org/debian sid/main amd64 r-cran-quantreg amd64 6.1-1 [1442 kB] Get:2818 http://deb.debian.org/debian sid/main amd64 r-cran-ellipsis amd64 0.3.2-2 [35.1 kB] Get:2819 http://deb.debian.org/debian sid/main amd64 r-cran-forcats all 1.0.0-1 [413 kB] Get:2820 http://deb.debian.org/debian sid/main amd64 r-cran-hms all 1.1.3-1 [104 kB] Get:2821 http://deb.debian.org/debian sid/main amd64 r-cran-clipr all 0.8.0-1 [53.0 kB] Get:2822 http://deb.debian.org/debian sid/main amd64 r-cran-bit amd64 4.6.0+dfsg-1 [455 kB] Get:2823 http://deb.debian.org/debian sid/main amd64 r-cran-bit64 amd64 4.6.0-1-1 [481 kB] Get:2824 http://deb.debian.org/debian sid/main amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] Get:2825 http://deb.debian.org/debian sid/main amd64 r-cran-progress all 1.2.3-1 [93.0 kB] Get:2826 http://deb.debian.org/debian sid/main amd64 r-cran-vroom amd64 1.6.5-1 [830 kB] Get:2827 http://deb.debian.org/debian sid/main amd64 r-cran-readr amd64 2.1.5-1 [759 kB] Get:2828 http://deb.debian.org/debian sid/main amd64 r-cran-haven amd64 2.5.4-1 [342 kB] Get:2829 http://deb.debian.org/debian sid/main amd64 r-cran-rematch all 2.0.0-1 [18.2 kB] Get:2830 http://deb.debian.org/debian sid/main amd64 r-cran-cellranger all 1.1.0-3 [100 kB] Get:2831 http://deb.debian.org/debian sid/main amd64 r-cran-readxl amd64 1.4.5-1 [341 kB] Get:2832 http://deb.debian.org/debian sid/main amd64 r-cran-writexl amd64 1.5.2-1 [147 kB] Get:2833 http://deb.debian.org/debian sid/main amd64 r-cran-r.methodss3 all 1.8.2-1 [84.5 kB] Get:2834 http://deb.debian.org/debian sid/main amd64 r-cran-r.oo all 1.27.0-1 [983 kB] Get:2835 http://deb.debian.org/debian sid/main amd64 r-cran-r.utils all 2.13.0-1 [1433 kB] Get:2836 http://deb.debian.org/debian sid/main amd64 r-cran-zip amd64 2.3.2-1 [140 kB] Get:2837 http://deb.debian.org/debian sid/main amd64 r-cran-openxlsx amd64 4.2.8-1 [2034 kB] Get:2838 http://deb.debian.org/debian sid/main amd64 r-cran-rio all 1.2.3-1 [531 kB] Get:2839 http://deb.debian.org/debian sid/main amd64 r-cran-car all 3.1-3-1 [1533 kB] Get:2840 http://deb.debian.org/debian sid/main amd64 r-cran-rstatix all 0.7.2-1 [609 kB] Get:2841 http://deb.debian.org/debian sid/main amd64 r-cran-ggpubr all 0.6.0-1 [2080 kB] Get:2842 http://deb.debian.org/debian sid/main amd64 r-cran-miniui all 0.1.1.1-3 [35.9 kB] Get:2843 http://deb.debian.org/debian sid/main amd64 r-cran-shinyjs all 2.1.0-1 [1009 kB] Get:2844 http://deb.debian.org/debian sid/main amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1212 kB] Get:2845 http://deb.debian.org/debian sid/main amd64 r-cran-plotly all 4.10.4+dfsg-2 [3634 kB] Get:2846 http://deb.debian.org/debian sid/main amd64 r-cran-gprofiler2 all 0.2.3+dfsg-1 [121 kB] Get:2847 http://deb.debian.org/debian sid/main amd64 r-cran-pheatmap all 1.0.12-2 [77.9 kB] Get:2848 http://deb.debian.org/debian sid/main amd64 salmon amd64 1.10.2+ds1-1+b4 [3404 kB] Get:2849 http://deb.debian.org/debian sid/main amd64 python3-connection-pool all 0.0.3-2 [5584 B] Get:2850 http://deb.debian.org/debian sid/main amd64 python3-datrie amd64 0.8.2-5+b2 [129 kB] Get:2851 http://deb.debian.org/debian sid/main amd64 python3-smmap all 6.0.0-1 [20.1 kB] Get:2852 http://deb.debian.org/debian sid/main amd64 python3-gitdb all 4.0.11-1 [45.5 kB] Get:2853 http://deb.debian.org/debian sid/main amd64 python3-git all 3.1.44-1 [147 kB] Get:2854 http://deb.debian.org/debian sid/main amd64 python3-pulp all 2.7.0+dfsg-4 [72.4 kB] Get:2855 http://deb.debian.org/debian sid/main amd64 python3-py all 1.11.0-4 [88.8 kB] Get:2856 http://deb.debian.org/debian sid/main amd64 python3-retry all 0.9.2-3 [7088 B] Get:2857 http://deb.debian.org/debian sid/main amd64 python3-smart-open all 7.1.0-1 [98.7 kB] Get:2858 http://deb.debian.org/debian sid/main amd64 python3-stopit all 1.1.2-3 [12.8 kB] Get:2859 http://deb.debian.org/debian sid/main amd64 python3-throttler all 1.2.2-2 [7072 B] Get:2860 http://deb.debian.org/debian sid/main amd64 python3-toposort all 1.10-2 [7336 B] Get:2861 http://deb.debian.org/debian sid/main amd64 python3-dpath all 2.2.0-1 [19.9 kB] Get:2862 http://deb.debian.org/debian sid/main amd64 python3-plac all 1.4.3-2 [65.7 kB] Get:2863 http://deb.debian.org/debian sid/main amd64 python3-yte all 1.5.4-1 [13.6 kB] Get:2864 http://deb.debian.org/debian sid/main amd64 python3-ratelimiter amd64 1.2.0.post0-4 [5740 B] Get:2865 http://deb.debian.org/debian sid/main amd64 snakemake all 7.32.4-7 [318 kB] Get:2866 http://deb.debian.org/debian sid/main amd64 trim-galore all 0.6.10-1 [17.8 MB] Get:2867 http://deb.debian.org/debian sid/main amd64 pigx-rnaseq all 0.1.1-1 [61.7 kB] Get:2868 http://deb.debian.org/debian sid/main amd64 piler amd64 0~20140707-4 [40.6 kB] Get:2869 http://deb.debian.org/debian sid/main amd64 pilercr amd64 1.06+dfsg-5 [115 kB] Get:2870 http://deb.debian.org/debian sid/main amd64 scala-library all 2.11.12-6 [9586 kB] Get:2871 http://deb.debian.org/debian sid/main amd64 pilon all 1.24-4 [497 kB] Get:2872 http://deb.debian.org/debian sid/main amd64 racon amd64 1.5.0-3 [3115 kB] Get:2873 http://deb.debian.org/debian sid/main amd64 pinfish amd64 0.1.0+ds-4+b5 [1494 kB] Get:2874 http://deb.debian.org/debian sid/main amd64 plink amd64 1.07+dfsg-4+b1 [1239 kB] Get:2875 http://deb.debian.org/debian sid/main amd64 r-cran-fracdiff amd64 1.5-3-1 [110 kB] Get:2876 http://deb.debian.org/debian sid/main amd64 r-cran-lmtest amd64 0.9.40-1 [399 kB] Get:2877 http://deb.debian.org/debian sid/main amd64 r-cran-quadprog amd64 1.5-8-1+b1 [33.6 kB] Get:2878 http://deb.debian.org/debian sid/main amd64 r-cran-xts amd64 0.14.1-1 [1189 kB] Get:2879 http://deb.debian.org/debian sid/main amd64 r-cran-ttr amd64 0.24.4-1 [509 kB] Get:2880 http://deb.debian.org/debian sid/main amd64 r-cran-quantmod all 0.4.26-1 [1033 kB] Get:2881 http://deb.debian.org/debian sid/main amd64 r-cran-tseries amd64 0.10-58-1 [382 kB] Get:2882 http://deb.debian.org/debian sid/main amd64 r-cran-urca amd64 1.3-4-1 [1052 kB] Get:2883 http://deb.debian.org/debian sid/main amd64 r-cran-forecast amd64 8.23.0-1 [1570 kB] Get:2884 http://deb.debian.org/debian sid/main amd64 r-bioc-multtest amd64 2.62.0-2 [843 kB] Get:2885 http://deb.debian.org/debian sid/main amd64 r-cran-optparse all 1.7.5-1 [83.8 kB] Get:2886 http://deb.debian.org/debian sid/main amd64 r-cran-uroot all 2.1-3-1 [1930 kB] Get:2887 http://deb.debian.org/debian sid/main amd64 pique all 1.0-7 [20.9 kB] Get:2888 http://deb.debian.org/debian sid/main amd64 pirs-profiles all 2.0.2+dfsg-12 [2566 kB] Get:2889 http://deb.debian.org/debian sid/main amd64 pirs amd64 2.0.2+dfsg-12 [120 kB] Get:2890 http://deb.debian.org/debian sid/main amd64 pizzly amd64 0.37.3+ds-9 [292 kB] Get:2891 http://deb.debian.org/debian sid/main amd64 placnet all 1.04-1 [11.0 kB] Get:2892 http://deb.debian.org/debian sid/main amd64 prokka all 1.14.6+dfsg-6 [15.2 MB] Get:2893 http://deb.debian.org/debian sid/main amd64 plasmidid amd64 1.6.5+dfsg-2 [47.2 kB] Get:2894 http://deb.debian.org/debian sid/main amd64 plasmidomics all 0.2.0-10 [7364 B] Get:2895 http://deb.debian.org/debian sid/main amd64 plasmidseeker amd64 1.3+dfsg-3+b1 [27.5 kB] Get:2896 http://deb.debian.org/debian sid/main amd64 plast amd64 2.3.2+dfsg-10+b5 [633 kB] Get:2897 http://deb.debian.org/debian sid/main amd64 plink1.9 amd64 1.90~b7.7-241022-1 [904 kB] Get:2898 http://deb.debian.org/debian sid/main amd64 plink2 amd64 2.00~a6.9-250129+dfsg-1 [2722 kB] Get:2899 http://deb.debian.org/debian sid/main amd64 python3-openbabel amd64 3.1.1+dfsg-11+b3 [572 kB] Get:2900 http://deb.debian.org/debian sid/main amd64 plip all 2.4.0+dfsg-2 [86.0 kB] Get:2901 http://deb.debian.org/debian sid/main amd64 poa amd64 2.0+20060928-10 [53.4 kB] Get:2902 http://deb.debian.org/debian sid/main amd64 pocketsphinx-en-us all 0.8+5prealpha+1-15 [24.3 MB] Get:2903 http://deb.debian.org/debian sid/main amd64 populations amd64 1.2.33+svn0120106+dfsg-7 [196 kB] Get:2904 http://deb.debian.org/debian sid/main amd64 porechop amd64 0.2.4+dfsg-6 [57.3 kB] Get:2905 http://deb.debian.org/debian sid/main amd64 poretools all 0.6.0+dfsg-7 [19.8 kB] Get:2906 http://deb.debian.org/debian sid/main amd64 pplacer amd64 1.1~alpha19-8+b1 [3093 kB] Get:2907 http://deb.debian.org/debian sid/main amd64 prank amd64 0.0.170427+dfsg-3 [395 kB] Get:2908 http://deb.debian.org/debian sid/main amd64 predictnls all 1.0.20-8 [1404 kB] Get:2909 http://deb.debian.org/debian sid/main amd64 presto all 0.7.2-2 [240 kB] Get:2910 http://deb.debian.org/debian sid/main amd64 preview-latex-style all 13.2-1 [350 kB] Get:2911 http://deb.debian.org/debian sid/main amd64 prime-phylo amd64 1.0.11-13+b1 [845 kB] Get:2912 http://deb.debian.org/debian sid/main amd64 primer3 amd64 2.6.1-5 [204 kB] Get:2913 http://deb.debian.org/debian sid/main amd64 prinseq-lite all 0.20.4-6 [71.2 kB] Get:2914 http://deb.debian.org/debian sid/main amd64 proalign amd64 0.603-6 [169 kB] Get:2915 http://deb.debian.org/debian sid/main amd64 probabel amd64 0.5.0+dfsg-6 [598 kB] Get:2916 http://deb.debian.org/debian sid/main amd64 probalign amd64 1.4-10 [70.6 kB] Get:2917 http://deb.debian.org/debian sid/main amd64 probcons amd64 1.12-14 [119 kB] Get:2918 http://deb.debian.org/debian sid/main amd64 proda amd64 1.0-14 [65.4 kB] Get:2919 http://deb.debian.org/debian sid/main amd64 profnet-bval amd64 1.0.22-8 [45.5 kB] Get:2920 http://deb.debian.org/debian sid/main amd64 profbval all 1.0.22-8 [60.2 kB] Get:2921 http://deb.debian.org/debian sid/main amd64 profnet-isis amd64 1.0.22-8 [96.7 kB] Get:2922 http://deb.debian.org/debian sid/main amd64 profisis all 1.0.11-7 [63.3 kB] Get:2923 http://deb.debian.org/debian sid/main amd64 profnet-chop amd64 1.0.22-8 [96.8 kB] Get:2924 http://deb.debian.org/debian sid/main amd64 profnet-con amd64 1.0.22-8 [97.0 kB] Get:2925 http://deb.debian.org/debian sid/main amd64 profnet-md amd64 1.0.22-8 [44.8 kB] Get:2926 http://deb.debian.org/debian sid/main amd64 profnet-prof amd64 1.0.22-8 [96.8 kB] Get:2927 http://deb.debian.org/debian sid/main amd64 profnet-snapfun amd64 1.0.22-8 [97.7 kB] Get:2928 http://deb.debian.org/debian sid/main amd64 profphd-net amd64 1.0.22-8 [143 kB] Get:2929 http://deb.debian.org/debian sid/main amd64 proftmb amd64 1.1.12-11+b1 [363 kB] Get:2930 http://deb.debian.org/debian sid/main amd64 proj-bin amd64 9.6.0-1 [230 kB] Get:2931 http://deb.debian.org/debian sid/main amd64 proteinortho amd64 6.3.1+dfsg-1 [350 kB] Get:2932 http://deb.debian.org/debian sid/main amd64 prottest all 3.4.2+dfsg-8 [349 kB] Get:2933 http://deb.debian.org/debian sid/main amd64 provean amd64 1.1.5+ds-2 [49.2 kB] Get:2934 http://deb.debian.org/debian sid/main amd64 pscan-chip amd64 1.1-3+b3 [89.4 kB] Get:2935 http://deb.debian.org/debian sid/main amd64 pscan-chip-data all 1.1-3 [671 kB] Get:2936 http://deb.debian.org/debian sid/main amd64 pscan-tfbs amd64 1.2.2-4+b3 [77.1 kB] Get:2937 http://deb.debian.org/debian sid/main amd64 psmisc amd64 23.7-2 [267 kB] Get:2938 http://deb.debian.org/debian sid/main amd64 psortb amd64 3.0.6+dfsg-4+b2 [16.4 MB] Get:2939 http://deb.debian.org/debian sid/main amd64 publicsuffix all 20250306.2152-0.1 [295 kB] Get:2940 http://deb.debian.org/debian sid/main amd64 pullseq amd64 1.0.2-5 [22.1 kB] Get:2941 http://deb.debian.org/debian sid/main amd64 pycoqc all 2.5.2+dfsg-4 [36.4 kB] Get:2942 http://deb.debian.org/debian sid/main amd64 python3-simplejson amd64 3.19.3-1+b2 [63.5 kB] Get:2943 http://deb.debian.org/debian sid/main amd64 python3-wxgtk4.0 amd64 4.2.2+dfsg-3+b1 [7183 kB] Get:2944 http://deb.debian.org/debian sid/main amd64 python3-asteval all 1.0.6-2 [22.0 kB] Get:2945 http://deb.debian.org/debian sid/main amd64 python3-uncertainties all 3.2.2-1 [54.7 kB] Get:2946 http://deb.debian.org/debian sid/main amd64 python3-lmfit all 1.3.2-2 [81.5 kB] Get:2947 http://deb.debian.org/debian sid/main amd64 pycorrfit amd64 1.1.7+nopack-3 [758 kB] Get:2948 http://deb.debian.org/debian sid/main amd64 python3-astroid all 3.3.8-2 [213 kB] Get:2949 http://deb.debian.org/debian sid/main amd64 python3-isort all 6.0.1-1 [72.3 kB] Get:2950 http://deb.debian.org/debian sid/main amd64 python3-logilab-common all 2.1.0-1 [111 kB] Get:2951 http://deb.debian.org/debian sid/main amd64 python3-mccabe all 0.7.0-1 [10.5 kB] Get:2952 http://deb.debian.org/debian sid/main amd64 python3-tomlkit all 0.13.2-1 [42.7 kB] Get:2953 http://deb.debian.org/debian sid/main amd64 pylint all 3.3.4-1 [341 kB] Get:2954 http://deb.debian.org/debian sid/main amd64 python3-typechecks all 0.1.0+ds-4 [4580 B] Get:2955 http://deb.debian.org/debian sid/main amd64 python3-datacache all 1.4.1-2 [12.9 kB] Get:2956 http://deb.debian.org/debian sid/main amd64 python3-gtfparse all 1.3.0+ds-2 [10.2 kB] Get:2957 http://deb.debian.org/debian sid/main amd64 python3-memoized-property all 1.0.3-2 [5552 B] Get:2958 http://deb.debian.org/debian sid/main amd64 python3-serializable all 0.4.1+ds-2 [8400 B] Get:2959 http://deb.debian.org/debian sid/main amd64 pyensembl all 2.3.13-2 [36.8 kB] Get:2960 http://deb.debian.org/debian sid/main amd64 pyfastx amd64 2.2.0-1+b1 [128 kB] Get:2961 http://deb.debian.org/debian sid/main amd64 python3-legacy-cgi all 2.6.2-1 [16.3 kB] Get:2962 http://deb.debian.org/debian sid/main amd64 python3-opengl all 3.1.9+dfsg-1 [622 kB] Get:2963 http://deb.debian.org/debian sid/main amd64 python3-pyqt5.qtopengl amd64 5.15.11+dfsg-2 [207 kB] Get:2964 http://deb.debian.org/debian sid/main amd64 pymol-data all 3.1.0+dfsg-1 [1430 kB] Get:2965 http://deb.debian.org/debian sid/main amd64 python3-pymol amd64 3.1.0+dfsg-1 [3906 kB] Get:2966 http://deb.debian.org/debian sid/main amd64 pymol all 3.1.0+dfsg-1 [181 kB] Get:2967 http://deb.debian.org/debian sid/main amd64 python3-configobj all 5.0.9-1 [34.0 kB] Get:2968 http://deb.debian.org/debian sid/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get:2969 http://deb.debian.org/debian sid/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get:2970 http://deb.debian.org/debian sid/main amd64 python3-pytest all 8.3.5-1 [250 kB] Get:2971 http://deb.debian.org/debian sid/main amd64 python3-hypothesis all 6.127.4-1 [330 kB] Get:2972 http://deb.debian.org/debian sid/main amd64 python3-pytest-arraydiff all 0.6.1-3 [10.5 kB] Get:2973 http://deb.debian.org/debian sid/main amd64 python3-pytest-astropy-header all 0.2.2-2 [9000 B] Get:2974 http://deb.debian.org/debian sid/main amd64 python3-coverage amd64 7.6.0+dfsg1-2+b2 [175 kB] Get:2975 http://deb.debian.org/debian sid/main amd64 python3-pytest-cov all 5.0.0-1 [26.8 kB] Get:2976 http://deb.debian.org/debian sid/main amd64 python3-pytest-doctestplus all 1.4.0-1 [25.7 kB] Get:2977 http://deb.debian.org/debian sid/main amd64 python3-pytest-filter-subpackage all 0.2.0-1 [6312 B] Get:2978 http://deb.debian.org/debian sid/main amd64 python3-pytest-mock all 3.14.0-2 [18.3 kB] Get:2979 http://deb.debian.org/debian sid/main amd64 python3-pytest-remotedata all 0.4.1-1 [9292 B] Get:2980 http://deb.debian.org/debian sid/main amd64 python3-pytest-astropy all 0.11.0-1 [6716 B] Get:2981 http://deb.debian.org/debian sid/main amd64 python3-ply all 3.11-9 [62.9 kB] Get:2982 http://deb.debian.org/debian sid/main amd64 python3-astropy-iers-data all 0.2025.1.6.0.33.42-1 [1091 kB] Get:2983 http://deb.debian.org/debian sid/main amd64 python3-erfa amd64 2.0.1.5+ds-1+b1 [311 kB] Get:2984 http://deb.debian.org/debian sid/main amd64 python3-astropy amd64 7.0.1-2+b1 [3751 kB] Get:2985 http://deb.debian.org/debian sid/main amd64 python3-multipletau all 0.4.1+ds-1 [11.1 kB] Get:2986 http://deb.debian.org/debian sid/main amd64 python3-tifffile all 20250313-1 [186 kB] Get:2987 http://deb.debian.org/debian sid/main amd64 pyscanfcs amd64 0.3.6+ds-5 [520 kB] Get:2988 http://deb.debian.org/debian sid/main amd64 python-biopython-doc all 1.85+dfsg-2 [18.2 MB] Get:2989 http://deb.debian.org/debian sid/main amd64 python-odf-doc all 1.4.2-4 [5344 kB] Get:2990 http://deb.debian.org/debian sid/main amd64 python3-odf all 1.4.2-4 [78.4 kB] Get:2991 http://deb.debian.org/debian sid/main amd64 python-odf-tools all 1.4.2-4 [28.4 kB] Get:2992 http://deb.debian.org/debian sid/main amd64 python-tables-data all 3.10.2-2 [47.3 kB] Get:2993 http://deb.debian.org/debian sid/main amd64 python3-bcrypt amd64 4.2.0-2.1+b1 [211 kB] Get:2994 http://deb.debian.org/debian sid/main amd64 python3-cryptography amd64 43.0.0-1 [935 kB] Get:2995 http://deb.debian.org/debian sid/main amd64 python3-jwt all 2.10.1-2 [31.3 kB] Get:2996 http://deb.debian.org/debian sid/main amd64 python3-adal all 1.2.7-5 [32.5 kB] Get:2997 http://deb.debian.org/debian sid/main amd64 python3-pycares amd64 4.4.0-2+b3 [34.4 kB] Get:2998 http://deb.debian.org/debian sid/main amd64 python3-aiodns all 3.2.0-2 [8216 B] Get:2999 http://deb.debian.org/debian sid/main amd64 python3-aiohappyeyeballs all 2.6.1-1 [14.4 kB] Get:3000 http://deb.debian.org/debian sid/main amd64 python3-multidict amd64 6.1.0-1+b2 [36.9 kB] Get:3001 http://deb.debian.org/debian sid/main amd64 python3-yarl amd64 1.13.1-1+b2 [101 kB] Get:3002 http://deb.debian.org/debian sid/main amd64 python3-async-timeout all 5.0.1-1 [8324 B] Get:3003 http://deb.debian.org/debian sid/main amd64 python3-frozenlist amd64 1.5.0-1+b2 [49.2 kB] Get:3004 http://deb.debian.org/debian sid/main amd64 python3-aiosignal all 1.3.2-1 [6100 B] Get:3005 http://deb.debian.org/debian sid/main amd64 python3-aiohttp amd64 3.10.11-1+b1 [322 kB] Get:3006 http://deb.debian.org/debian sid/main amd64 python3-sniffio all 1.3.1-1 [7120 B] Get:3007 http://deb.debian.org/debian sid/main amd64 python3-anyio all 4.8.0-3 [63.6 kB] Get:3008 http://deb.debian.org/debian sid/main amd64 python3-argh all 0.31.3-1 [26.6 kB] Get:3009 http://deb.debian.org/debian sid/main amd64 python3-arrow all 1.3.0-1.1 [64.7 kB] Get:3010 http://deb.debian.org/debian sid/main amd64 python3-asgiref all 3.8.1-1 [28.8 kB] Get:3011 http://deb.debian.org/debian sid/main amd64 python3-blinker all 1.9.0-1 [12.6 kB] Get:3012 http://deb.debian.org/debian sid/main amd64 python3-oauthlib all 3.2.2-3 [95.6 kB] Get:3013 http://deb.debian.org/debian sid/main amd64 python3-requests-oauthlib all 1.3.1-1 [21.1 kB] Get:3014 http://deb.debian.org/debian sid/main amd64 python3-msrest all 0.6.21-5 [47.9 kB] Get:3015 http://deb.debian.org/debian sid/main amd64 python3-msrestazure all 0.6.4-4 [26.6 kB] Get:3016 http://deb.debian.org/debian sid/main amd64 python3-azure-storage all 20250304+git-1 [304 kB] Get:3017 http://deb.debian.org/debian sid/main amd64 python3-dnspython all 2.7.0-1 [164 kB] Get:3018 http://deb.debian.org/debian sid/main amd64 python3-marshmallow all 3.26.1-0.1 [70.7 kB] Get:3019 http://deb.debian.org/debian sid/main amd64 python3-msal all 1.32.0-1 [101 kB] Get:3020 http://deb.debian.org/debian sid/main amd64 python3-gi-cairo amd64 3.50.0-4+b1 [12.9 kB] Get:3021 http://deb.debian.org/debian sid/main amd64 python3-portalocker all 2.2.1-1 [18.5 kB] Get:3022 http://deb.debian.org/debian sid/main amd64 python3-msal-extensions all 1.3.1-1 [17.8 kB] Get:3023 http://deb.debian.org/debian sid/main amd64 python3-regex amd64 0.1.20241106-1+b1 [274 kB] Get:3024 http://deb.debian.org/debian sid/main amd64 python3-nltk all 3.9.1-2 [1009 kB] Get:3025 http://deb.debian.org/debian sid/main amd64 python3-pydash all 8.0.3-3 [104 kB] Get:3026 http://deb.debian.org/debian sid/main amd64 python3-strictyaml all 1.6.1-3 [92.9 kB] Get:3027 http://deb.debian.org/debian sid/main amd64 python3-websocket all 1.8.0-2 [45.5 kB] Get:3028 http://deb.debian.org/debian sid/main amd64 python3-azure all 20250304+git-1 [17.5 MB] Get:3029 http://deb.debian.org/debian sid/main amd64 python3-bibtexparser all 2.0.0b5+really1.4.3-1 [34.3 kB] Get:3030 http://deb.debian.org/debian sid/main amd64 python3-bioframe all 0.4.1-2 [71.9 kB] Get:3031 http://deb.debian.org/debian sid/main amd64 python3-elastic-transport all 8.17.1-2 [37.0 kB] Get:3032 http://deb.debian.org/debian sid/main amd64 python3-elasticsearch all 8.17.2-1 [223 kB] Get:3033 http://deb.debian.org/debian sid/main amd64 python3-biomaj3-core all 3.0.28-4 [25.1 kB] Get:3034 http://deb.debian.org/debian sid/main amd64 python3-biomaj3-cli all 3.1.11-5 [18.9 kB] Get:3035 http://deb.debian.org/debian sid/main amd64 python3-py-zipkin all 1.2.8-2 [36.4 kB] Get:3036 http://deb.debian.org/debian sid/main amd64 python3-biomaj3-zipkin all 0.2.2-3 [15.1 kB] Get:3037 http://deb.debian.org/debian sid/main amd64 python3-itsdangerous all 2.2.0-2 [18.1 kB] Get:3038 http://deb.debian.org/debian sid/main amd64 python3-werkzeug all 3.1.3-2 [207 kB] Get:3039 http://deb.debian.org/debian sid/main amd64 python3-flask all 3.1.0-2 [106 kB] Get:3040 http://deb.debian.org/debian sid/main amd64 python3-ftputil all 5.1.0-1 [40.4 kB] Get:3041 http://deb.debian.org/debian sid/main amd64 python3-prettytable all 3.15.1-1 [41.8 kB] Get:3042 http://deb.debian.org/debian sid/main amd64 python3-irodsclient all 3.0.0-1 [213 kB] Get:3043 http://deb.debian.org/debian sid/main amd64 python3-pika all 1.3.2-1 [125 kB] Get:3044 http://deb.debian.org/debian sid/main amd64 python3-prometheus-client all 0.21.1+ds1-1 [44.9 kB] Get:3045 http://deb.debian.org/debian sid/main amd64 python3-protobuf amd64 3.21.12-10+b6 [251 kB] Get:3046 http://deb.debian.org/debian sid/main amd64 python3-pycurl amd64 7.45.4-1+b1 [71.0 kB] Get:3047 http://deb.debian.org/debian sid/main amd64 python3-redis all 4.3.4-4 [185 kB] Get:3048 http://deb.debian.org/debian sid/main amd64 python3-simpleeval all 1.0.3-1 [24.0 kB] Get:3049 http://deb.debian.org/debian sid/main amd64 python3-biomaj3-download all 3.2.12-2 [49.4 kB] Get:3050 http://deb.debian.org/debian sid/main amd64 python3-biomaj3-process all 3.0.19-3 [25.3 kB] Get:3051 http://deb.debian.org/debian sid/main amd64 python3-consul all 1.5.1+dfsg-1 [22.7 kB] Get:3052 http://deb.debian.org/debian sid/main amd64 python3-pyasn1 all 0.6.1-1 [68.9 kB] Get:3053 http://deb.debian.org/debian sid/main amd64 python3-ldap3 all 2.9.1-2 [235 kB] Get:3054 http://deb.debian.org/debian sid/main amd64 python3-biomaj3-user all 3.0.12-2 [19.7 kB] Get:3055 http://deb.debian.org/debian sid/main amd64 python3-influxdb all 5.3.2-5 [53.5 kB] Get:3056 http://deb.debian.org/debian sid/main amd64 python3-bson all 4.10.1-5 [87.1 kB] Get:3057 http://deb.debian.org/debian sid/main amd64 python3-pymongo all 4.10.1-5 [272 kB] Get:3058 http://deb.debian.org/debian sid/main amd64 python3-yapsy all 1.12.2-3 [30.4 kB] Get:3059 http://deb.debian.org/debian sid/main amd64 python3-biomaj3 all 3.1.24-2 [65.2 kB] Get:3060 http://deb.debian.org/debian sid/main amd64 python3-flask-cors all 5.0.0-1 [46.3 kB] Get:3061 http://deb.debian.org/debian sid/main amd64 python3-biomaj3-daemon all 3.0.24-3 [30.7 kB] Get:3062 http://deb.debian.org/debian sid/main amd64 python3-blessed all 1.20.0-2 [54.3 kB] Get:3063 http://deb.debian.org/debian sid/main amd64 python3-bottleneck amd64 1.4.2+ds1-2+b1 [92.3 kB] Get:3064 http://deb.debian.org/debian sid/main amd64 python3-bson-ext amd64 4.10.1-5+b1 [72.0 kB] Get:3065 http://deb.debian.org/debian sid/main amd64 python3-cachetools all 5.3.3-1 [13.2 kB] Get:3066 http://deb.debian.org/debian sid/main amd64 python3-cgecore all 1.5.6+ds-2 [28.8 kB] Get:3067 http://deb.debian.org/debian sid/main amd64 python3-cgelib all 0.7.3-3 [46.6 kB] Get:3068 http://deb.debian.org/debian sid/main amd64 python3-comm all 0.2.1-1 [8104 B] Get:3069 http://deb.debian.org/debian sid/main amd64 python3-cpuinfo all 9.0.0+git20221119-3 [23.5 kB] Get:3070 http://deb.debian.org/debian sid/main amd64 python3-cssselect all 1.3.0-1 [21.9 kB] Get:3071 http://deb.debian.org/debian sid/main amd64 python3-cyvcf2 amd64 0.31.1-2+b3 [908 kB] Get:3072 http://deb.debian.org/debian sid/main amd64 python3.13-dev amd64 3.13.2-2 [506 kB] Get:3073 http://deb.debian.org/debian sid/main amd64 python3-dev amd64 3.13.2-2 [26.1 kB] Get:3074 http://deb.debian.org/debian sid/main amd64 python3-distro all 1.9.0-1 [20.3 kB] Get:3075 http://deb.debian.org/debian sid/main amd64 python3-docker all 7.1.0-2 [89.8 kB] Get:3076 http://deb.debian.org/debian sid/main amd64 python3-dotenv all 1.0.1-1 [26.6 kB] Get:3077 http://deb.debian.org/debian sid/main amd64 python3-stone all 3.3.8-1 [114 kB] Get:3078 http://deb.debian.org/debian sid/main amd64 python3-dropbox all 12.0.2-2 [399 kB] Get:3079 http://deb.debian.org/debian sid/main amd64 python3-edlib amd64 1.2.7-6+b3 [68.4 kB] Get:3080 http://deb.debian.org/debian sid/main amd64 python3-emperor all 1.0.4+ds-1 [157 kB] Get:3081 http://deb.debian.org/debian sid/main amd64 python3-prefixed all 0.7.0-1 [7984 B] Get:3082 http://deb.debian.org/debian sid/main amd64 python3-enlighten amd64 1.11.2-1 [41.4 kB] Get:3083 http://deb.debian.org/debian sid/main amd64 python3-greenlet amd64 3.1.0-1+b2 [165 kB] Get:3084 http://deb.debian.org/debian sid/main amd64 python3-sqlalchemy all 2.0.32+ds1-1 [1196 kB] Get:3085 http://deb.debian.org/debian sid/main amd64 python3-flask-sqlalchemy all 3.1.1-3 [36.0 kB] Get:3086 http://deb.debian.org/debian sid/main amd64 python3-public all 4.1.0-2 [7032 B] Get:3087 http://deb.debian.org/debian sid/main amd64 python3-flufl.lock all 8.1.0-2 [15.6 kB] Get:3088 http://deb.debian.org/debian sid/main amd64 python3-fqdn all 1.5.1-2 [7592 B] Get:3089 http://deb.debian.org/debian sid/main amd64 python3-gdal amd64 3.10.2+dfsg-1+b4 [959 kB] Get:3090 http://deb.debian.org/debian sid/main amd64 python3-geneimpacts all 0.3.7-5 [33.7 kB] Get:3091 http://deb.debian.org/debian sid/main amd64 python3-zope.event all 5.0-0.1 [8164 B] Get:3092 http://deb.debian.org/debian sid/main amd64 python3-zope.interface amd64 7.2-1+b1 [152 kB] Get:3093 http://deb.debian.org/debian sid/main amd64 python3-gevent amd64 24.11.1-1+b1 [829 kB] Get:3094 http://deb.debian.org/debian sid/main amd64 python3-gffutils all 0.13-2 [1041 kB] Get:3095 http://deb.debian.org/debian sid/main amd64 python3-globus-sdk all 3.51.0-1 [301 kB] Get:3096 http://deb.debian.org/debian sid/main amd64 python3-openssl all 25.0.0-1 [52.1 kB] Get:3097 http://deb.debian.org/debian sid/main amd64 python3-pyasn1-modules all 0.4.1-2 [85.2 kB] Get:3098 http://deb.debian.org/debian sid/main amd64 python3-pyu2f all 0.1.5-4 [22.6 kB] Get:3099 http://deb.debian.org/debian sid/main amd64 python3-responses all 0.25.6-1 [46.0 kB] Get:3100 http://deb.debian.org/debian sid/main amd64 python3-rsa all 4.9-2 [31.3 kB] Get:3101 http://deb.debian.org/debian sid/main amd64 python3-google-auth all 2.28.2-3 [113 kB] Get:3102 http://deb.debian.org/debian sid/main amd64 python3-gridfs all 4.10.1-5 [65.6 kB] Get:3103 http://deb.debian.org/debian sid/main amd64 python3-h11 all 0.14.0-1 [50.1 kB] Get:3104 http://deb.debian.org/debian sid/main amd64 python3-hpack all 4.0.0-2 [25.0 kB] Get:3105 http://deb.debian.org/debian sid/main amd64 python3-hyperframe all 6.0.0-1 [14.5 kB] Get:3106 http://deb.debian.org/debian sid/main amd64 python3-h2 all 4.1.0-4 [80.8 kB] Get:3107 http://deb.debian.org/debian sid/main amd64 python3-hisat2 all 2.2.1-5 [14.0 kB] Get:3108 http://deb.debian.org/debian sid/main amd64 python3-webencodings all 0.5.1-5 [11.1 kB] Get:3109 http://deb.debian.org/debian sid/main amd64 python3-html5lib all 1.2-1 [92.2 kB] Get:3110 http://deb.debian.org/debian sid/main amd64 python3-html5rdf all 1.2.1-2 [85.9 kB] Get:3111 http://deb.debian.org/debian sid/main amd64 python3-httpcore all 1.0.7-1 [44.7 kB] Get:3112 http://deb.debian.org/debian sid/main amd64 python3-httpx all 0.28.1-1 [76.2 kB] Get:3113 http://deb.debian.org/debian sid/main amd64 python3-ijson amd64 3.3.0-1+b2 [40.7 kB] Get:3114 http://deb.debian.org/debian sid/main amd64 python3-invoke all 2.2.0-2 [122 kB] Get:3115 http://deb.debian.org/debian sid/main amd64 python3-jupyterlab-widgets all 8.1.5-6 [171 kB] Get:3116 http://deb.debian.org/debian sid/main amd64 python3-widgetsnbextension all 8.1.5-6 [851 kB] Get:3117 http://deb.debian.org/debian sid/main amd64 python3-ipywidgets all 8.1.5-6 [105 kB] Get:3118 http://deb.debian.org/debian sid/main amd64 python3-isal amd64 1.7.1-1+b2 [43.3 kB] Get:3119 http://deb.debian.org/debian sid/main amd64 python3-isoduration all 20.11.0+git20211126.ae0bd61-2 [12.3 kB] Get:3120 http://deb.debian.org/debian sid/main amd64 python3-json-pointer all 2.4-3 [14.6 kB] Get:3121 http://deb.debian.org/debian sid/main amd64 python3-kubernetes all 30.1.0-2 [474 kB] Get:3122 http://deb.debian.org/debian sid/main amd64 python3-libcloud all 3.8.0+repack-4 [893 kB] Get:3123 http://deb.debian.org/debian sid/main amd64 python3-mofapy all 1.6.1+dfsg-15 [34.7 kB] Get:3124 http://deb.debian.org/debian sid/main amd64 python3-nacl amd64 1.5.0-7 [57.6 kB] Get:3125 http://deb.debian.org/debian sid/main amd64 python3-numexpr amd64 2.10.2-1+b2 [129 kB] Get:3126 http://deb.debian.org/debian sid/main amd64 python3-olefile all 0.47-1 [39.3 kB] Get:3127 http://deb.debian.org/debian sid/main amd64 python3-orjson amd64 3.10.7-2+b1 [264 kB] Get:3128 http://deb.debian.org/debian sid/main amd64 python3-standard-pipes all 3.13.0-5 [7376 B] Get:3129 http://deb.debian.org/debian sid/main amd64 python3-pairtools amd64 1.1.3-1+b1 [207 kB] Get:3130 http://deb.debian.org/debian sid/main amd64 python3-paramiko all 3.5.1-2 [144 kB] Get:3131 http://deb.debian.org/debian sid/main amd64 python3-wheel all 0.45.1-1 [56.7 kB] Get:3132 http://deb.debian.org/debian sid/main amd64 python3-parasail all 1.3.3-1 [38.6 kB] Get:3133 http://deb.debian.org/debian sid/main amd64 python3-tblib all 3.0.0-6 [13.8 kB] Get:3134 http://deb.debian.org/debian sid/main amd64 python3-zmq amd64 26.2.1-1+b1 [182 kB] Get:3135 http://deb.debian.org/debian sid/main amd64 python3-parsl all 2025.01.13+ds-1 [276 kB] Get:3136 http://deb.debian.org/debian sid/main amd64 python3-pooch all 1.8.2-1 [58.4 kB] Get:3137 http://deb.debian.org/debian sid/main amd64 python3-pubsub all 4.0.3-7 [46.7 kB] Get:3138 http://deb.debian.org/debian sid/main amd64 python3-pyasyncore all 1.0.2-3 [10.1 kB] Get:3139 http://deb.debian.org/debian sid/main amd64 python3-pygraphviz amd64 1.14-1+b2 [77.5 kB] Get:3140 http://deb.debian.org/debian sid/main amd64 python3-pyinotify all 0.9.6-5 [24.9 kB] Get:3141 http://deb.debian.org/debian sid/main amd64 python3-pymongo-ext amd64 4.10.1-5+b1 [76.4 kB] Get:3142 http://deb.debian.org/debian sid/main amd64 python3-rfc3339-validator all 0.1.4-2 [4060 B] Get:3143 http://deb.debian.org/debian sid/main amd64 python3-rfc3986-validator all 0.1.1-2 [4884 B] Get:3144 http://deb.debian.org/debian sid/main amd64 python3-rfc3987 all 1.3.8-3 [8884 B] Get:3145 http://deb.debian.org/debian sid/main amd64 python3-ruffus all 2.8.4-7 [151 kB] Get:3146 http://deb.debian.org/debian sid/main amd64 python3-shasta amd64 0.12.0-1+b2 [2253 kB] Get:3147 http://deb.debian.org/debian sid/main amd64 python3-sklearn-pandas all 2.2.0-4 [19.1 kB] Get:3148 http://deb.debian.org/debian sid/main amd64 python3-sqlalchemy-ext amd64 2.0.32+ds1-1+b2 [151 kB] Get:3149 http://deb.debian.org/debian sid/main amd64 python3-sqt amd64 0.8.0-9 [140 kB] Get:3150 http://deb.debian.org/debian sid/main amd64 python3-tables-lib amd64 3.10.2-2+b1 [503 kB] Get:3151 http://deb.debian.org/debian sid/main amd64 python3-tables all 3.10.2-2 [353 kB] Get:3152 http://deb.debian.org/debian sid/main amd64 python3-toolz all 1.0.0-2 [44.2 kB] Get:3153 http://deb.debian.org/debian sid/main amd64 python3-upsetplot all 0.9.0-3 [24.9 kB] Get:3154 http://deb.debian.org/debian sid/main amd64 python3-uritemplate all 4.1.1-3 [10.6 kB] Get:3155 http://deb.debian.org/debian sid/main amd64 python3-webcolors all 1.13-1 [15.3 kB] Get:3156 http://deb.debian.org/debian sid/main amd64 python3-yappi amd64 1.6.10-2+b1 [32.5 kB] Get:3157 http://deb.debian.org/debian sid/main amd64 pyvcf all 0.6.8+git20170215.476169c-11 [11.5 kB] Get:3158 http://deb.debian.org/debian sid/main amd64 qiime all 2024.5.0-1 [304 kB] Get:3159 http://deb.debian.org/debian sid/main amd64 q2-types all 2024.5.0-1 [5531 kB] Get:3160 http://deb.debian.org/debian sid/main amd64 q2-cutadapt amd64 2024.5.0-1 [2308 kB] Get:3161 http://deb.debian.org/debian sid/main amd64 q2templates all 2024.5.0+ds-3 [13.0 kB] Get:3162 http://deb.debian.org/debian sid/main amd64 q2-demux all 2024.5.0+dfsg-1 [93.0 kB] Get:3163 http://deb.debian.org/debian sid/main amd64 q2-taxa all 2024.5.0+dfsg-1 [39.0 kB] Get:3164 http://deb.debian.org/debian sid/main amd64 r-bioc-decontam all 1.26.0+dfsg-2 [211 kB] Get:3165 http://deb.debian.org/debian sid/main amd64 q2-quality-control all 2024.5.0-1 [729 kB] Get:3166 http://deb.debian.org/debian sid/main amd64 q2-feature-table all 2024.5.0+dfsg-1 [339 kB] Get:3167 http://deb.debian.org/debian sid/main amd64 q2-feature-classifier all 2024.2.0-1 [120 kB] Get:3168 http://deb.debian.org/debian sid/main amd64 q2-quality-filter all 2024.5.0-1 [22.8 kB] Get:3169 http://deb.debian.org/debian sid/main amd64 q2-metadata amd64 2024.5.0+dfsg-1 [16.9 kB] Get:3170 http://deb.debian.org/debian sid/main amd64 qcat all 1.1.0-7 [31.3 kB] Get:3171 http://deb.debian.org/debian sid/main amd64 r-bioc-savr all 1.37.0-6 [632 kB] Get:3172 http://deb.debian.org/debian sid/main amd64 qcumber all 2.3.0-2 [50.5 kB] Get:3173 http://deb.debian.org/debian sid/main amd64 qt5-gtk-platformtheme amd64 5.15.15+dfsg-4+b1 [128 kB] Get:3174 http://deb.debian.org/debian sid/main amd64 qt6-gtk-platformtheme amd64 6.8.2+dfsg-5+b1 [111 kB] Get:3175 http://deb.debian.org/debian sid/main amd64 qt6-qpa-plugins amd64 6.8.2+dfsg-5+b1 [92.9 kB] Get:3176 http://deb.debian.org/debian sid/main amd64 qt6-svg-plugins amd64 6.8.2-3 [33.0 kB] Get:3177 http://deb.debian.org/debian sid/main amd64 qt6-translations-l10n all 6.8.2-2 [1742 kB] Get:3178 http://deb.debian.org/debian sid/main amd64 qt6-wayland amd64 6.8.2-3 [178 kB] Get:3179 http://deb.debian.org/debian sid/main amd64 qtltools amd64 1.3.1+dfsg-4+b3 [1003 kB] Get:3180 http://deb.debian.org/debian sid/main amd64 qttranslations5-l10n all 5.15.15-2 [1834 kB] Get:3181 http://deb.debian.org/debian sid/main amd64 qtwayland5 amd64 5.15.15-2 [203 kB] Get:3182 http://deb.debian.org/debian sid/main amd64 quicktree amd64 2.5-6 [21.6 kB] Get:3183 http://deb.debian.org/debian sid/main amd64 quorum amd64 1.1.2-2 [117 kB] Get:3184 http://deb.debian.org/debian sid/main amd64 qutemol amd64 0.4.1~cvs20081111-15+b3 [277 kB] Get:3185 http://deb.debian.org/debian sid/main amd64 r-cran-spatial amd64 7.3-18-1 [130 kB] Get:3186 http://deb.debian.org/debian sid/main amd64 r-recommended all 4.4.3-1 [2576 B] Get:3187 http://deb.debian.org/debian sid/main amd64 r-base all 4.4.3-1 [14.7 kB] Get:3188 http://deb.debian.org/debian sid/main amd64 xauth amd64 1:1.1.2-1.1 [35.9 kB] Get:3189 http://deb.debian.org/debian sid/main amd64 r-base-dev all 4.4.3-1 [4352 B] Get:3190 http://deb.debian.org/debian sid/main amd64 r-base-html all 4.4.3-1 [63.0 kB] Get:3191 http://deb.debian.org/debian sid/main amd64 r-bioc-affyio amd64 1.76.0-2 [88.1 kB] Get:3192 http://deb.debian.org/debian sid/main amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] Get:3193 http://deb.debian.org/debian sid/main amd64 r-bioc-preprocesscore amd64 1.68.0+ds-2 [152 kB] Get:3194 http://deb.debian.org/debian sid/main amd64 r-bioc-affy amd64 1.84.0-2 [2022 kB] Get:3195 http://deb.debian.org/debian sid/main amd64 r-cran-dbi all 1.2.3-1 [852 kB] Get:3196 http://deb.debian.org/debian sid/main amd64 r-cran-blob all 1.2.4-1 [49.6 kB] Get:3197 http://deb.debian.org/debian sid/main amd64 r-cran-plogr all 0.2.0-3 [14.9 kB] Get:3198 http://deb.debian.org/debian sid/main amd64 r-cran-rsqlite amd64 2.3.9-1 [1216 kB] Get:3199 http://deb.debian.org/debian sid/main amd64 r-bioc-keggrest all 1.46.0+dfsg-2 [184 kB] Get:3200 http://deb.debian.org/debian sid/main amd64 r-bioc-annotationdbi all 1.68.0-2 [4703 kB] Get:3201 http://deb.debian.org/debian sid/main amd64 r-bioc-annotate all 1.84.0+dfsg-2 [1865 kB] Get:3202 http://deb.debian.org/debian sid/main amd64 r-bioc-annotationfilter all 1.30.0+dfsg-2 [246 kB] Get:3203 http://deb.debian.org/debian sid/main amd64 r-bioc-aroma.light all 3.36.0-2 [588 kB] Get:3204 http://deb.debian.org/debian sid/main amd64 r-bioc-assorthead all 1.0.1+ds-2 [193 kB] Get:3205 http://deb.debian.org/debian sid/main amd64 r-bioc-beachmat amd64 2.22.0+ds-2 [896 kB] Get:3206 http://deb.debian.org/debian sid/main amd64 r-bioc-biocbaseutils all 1.8.0+dfsg-2 [43.5 kB] Get:3207 http://deb.debian.org/debian sid/main amd64 r-cran-dbplyr all 2.5.0+dfsg-1 [1247 kB] Get:3208 http://deb.debian.org/debian sid/main amd64 r-cran-filelock amd64 1.0.3-1 [27.3 kB] Get:3209 http://deb.debian.org/debian sid/main amd64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [302 kB] Get:3210 http://deb.debian.org/debian sid/main amd64 r-bioc-biocneighbors amd64 2.0.1+ds-2 [396 kB] Get:3211 http://deb.debian.org/debian sid/main amd64 r-bioc-scaledmatrix all 1.14.0+dfsg-2 [326 kB] Get:3212 http://deb.debian.org/debian sid/main amd64 r-cran-irlba amd64 2.3.5.1-4 [296 kB] Get:3213 http://deb.debian.org/debian sid/main amd64 r-cran-rsvd all 1.0.5-1 [3589 kB] Get:3214 http://deb.debian.org/debian sid/main amd64 r-bioc-biocsingular amd64 1.22.0+ds-2 [356 kB] Get:3215 http://deb.debian.org/debian sid/main amd64 r-cran-bookdown all 0.42+dfsg-1 [1404 kB] Get:3216 http://deb.debian.org/debian sid/main amd64 texlive-bibtex-extra all 2024.20250309-2 [79.4 MB] Get:3217 http://deb.debian.org/debian sid/main amd64 r-bioc-biocversion all 3.20.0-2 [11.0 kB] Get:3218 http://deb.debian.org/debian sid/main amd64 r-bioc-biocstyle all 2.34.0+dfsg-1 [452 kB] Get:3219 http://deb.debian.org/debian sid/main amd64 r-bioc-graph amd64 1.84.1-1 [1289 kB] Get:3220 http://deb.debian.org/debian sid/main amd64 r-bioc-rbgl amd64 1.82.0+dfsg-2 [556 kB] Get:3221 http://deb.debian.org/debian sid/main amd64 r-cran-runit all 0.4.33-1 [390 kB] Get:3222 http://deb.debian.org/debian sid/main amd64 r-bioc-biocviews all 1.74.0-2 [662 kB] Get:3223 http://deb.debian.org/debian sid/main amd64 r-cran-httr2 all 1.1.1-1 [765 kB] Get:3224 http://deb.debian.org/debian sid/main amd64 r-cran-xml2 amd64 1.3.8-1 [326 kB] Get:3225 http://deb.debian.org/debian sid/main amd64 r-bioc-biomart all 2.62.1+dfsg-1 [461 kB] Get:3226 http://deb.debian.org/debian sid/main amd64 r-bioc-biomformat all 1.34.0+dfsg-2 [231 kB] Get:3227 http://deb.debian.org/debian sid/main amd64 r-cran-dichromat all 1:2.0-0.1-1 [149 kB] Get:3228 http://deb.debian.org/debian sid/main amd64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [930 kB] Get:3229 http://deb.debian.org/debian sid/main amd64 r-bioc-bsgenome all 1.74.0-2 [7011 kB] Get:3230 http://deb.debian.org/debian sid/main amd64 r-bioc-variantannotation amd64 1.52.0-2 [3549 kB] Get:3231 http://deb.debian.org/debian sid/main amd64 r-bioc-protgenerics all 1.38.0-2 [239 kB] Get:3232 http://deb.debian.org/debian sid/main amd64 r-bioc-ensembldb all 2.30.0+dfsg-3 [1510 kB] Get:3233 http://deb.debian.org/debian sid/main amd64 r-bioc-biovizbase amd64 1.54.0-2 [2852 kB] Get:3234 http://deb.debian.org/debian sid/main amd64 r-bioc-pwalign amd64 1.2.0-2 [755 kB] Get:3235 http://deb.debian.org/debian sid/main amd64 r-cran-pracma all 2.4.4-3 [1722 kB] Get:3236 http://deb.debian.org/debian sid/main amd64 r-cran-powerlaw all 1.0.0-1 [3733 kB] Get:3237 http://deb.debian.org/debian sid/main amd64 r-bioc-go.db all 3.20.0-2 [11.2 MB] Get:3238 http://deb.debian.org/debian sid/main amd64 r-bioc-cner amd64 1.42.0+dfsg-2 [8410 kB] Get:3239 http://deb.debian.org/debian sid/main amd64 r-cran-amap amd64 0.8-20-2 [290 kB] Get:3240 http://deb.debian.org/debian sid/main amd64 r-bioc-ctc all 1.80.0-2 [328 kB] Get:3241 http://deb.debian.org/debian sid/main amd64 r-cran-fastcluster amd64 1.2.6-2+b1 [192 kB] Get:3242 http://deb.debian.org/debian sid/main amd64 r-bioc-gviz all 1.50.0+dfsg-2 [5168 kB] Get:3243 http://deb.debian.org/debian sid/main amd64 r-bioc-cummerbund all 2.48.0-2 [2870 kB] Get:3244 http://deb.debian.org/debian sid/main amd64 r-bioc-sparsematrixstats amd64 1.18.0+dfsg-2 [942 kB] Get:3245 http://deb.debian.org/debian sid/main amd64 r-bioc-delayedmatrixstats all 1.28.1+ds-1 [504 kB] Get:3246 http://deb.debian.org/debian sid/main amd64 r-cran-hwriter all 1.3.2.1-1 [110 kB] Get:3247 http://deb.debian.org/debian sid/main amd64 r-bioc-geneplotter all 1.84.0+dfsg-2 [1511 kB] Get:3248 http://deb.debian.org/debian sid/main amd64 r-bioc-genefilter amd64 1.88.0-2 [1233 kB] Get:3249 http://deb.debian.org/debian sid/main amd64 r-bioc-dexseq all 1.52.0+dfsg-2 [456 kB] Get:3250 http://deb.debian.org/debian sid/main amd64 r-bioc-dirichletmultinomial amd64 1.48.0-2 [1241 kB] Get:3251 http://deb.debian.org/debian sid/main amd64 r-cran-blockmodeling amd64 1.1.5-1 [429 kB] Get:3252 http://deb.debian.org/debian sid/main amd64 r-cran-brio amd64 1.1.5-1 [38.3 kB] Get:3253 http://deb.debian.org/debian sid/main amd64 r-cran-ps amd64 1.9.0-1 [406 kB] Get:3254 http://deb.debian.org/debian sid/main amd64 r-cran-processx amd64 3.8.6-1 [363 kB] Get:3255 http://deb.debian.org/debian sid/main amd64 r-cran-callr all 3.7.6-1 [460 kB] Get:3256 http://deb.debian.org/debian sid/main amd64 r-cran-desc all 1.4.3-1 [351 kB] Get:3257 http://deb.debian.org/debian sid/main amd64 r-cran-pkgbuild all 1.4.6-1 [214 kB] Get:3258 http://deb.debian.org/debian sid/main amd64 r-cran-rprojroot all 2.0.4-2 [125 kB] Get:3259 http://deb.debian.org/debian sid/main amd64 r-cran-pkgload all 1.4.0-1 [247 kB] Get:3260 http://deb.debian.org/debian sid/main amd64 r-cran-praise all 1.0.0-4 [20.1 kB] Get:3261 http://deb.debian.org/debian sid/main amd64 r-cran-diffobj amd64 0.3.5-1+b1 [1122 kB] Get:3262 http://deb.debian.org/debian sid/main amd64 r-cran-waldo all 0.6.1-2 [151 kB] Get:3263 http://deb.debian.org/debian sid/main amd64 r-cran-testthat amd64 3.2.3-1 [1633 kB] Get:3264 http://deb.debian.org/debian sid/main amd64 r-bioc-ebseq amd64 2.4.0-2 [1199 kB] Get:3265 http://deb.debian.org/debian sid/main amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [2023 kB] Get:3266 http://deb.debian.org/debian sid/main amd64 r-bioc-edger amd64 4.4.2+dfsg-1 [1118 kB] Get:3267 http://deb.debian.org/debian sid/main amd64 r-bioc-txdbmaker all 1.2.1+ds-2 [741 kB] Get:3268 http://deb.debian.org/debian sid/main amd64 r-bioc-genelendatabase all 1.42.0-3 [100 MB] Get:3269 http://deb.debian.org/debian sid/main amd64 r-cran-rentrez all 1.2.3+dfsg-1 [119 kB] Get:3270 http://deb.debian.org/debian sid/main amd64 r-cran-selectr all 0.4-2-2 [412 kB] Get:3271 http://deb.debian.org/debian sid/main amd64 r-cran-rvest all 1.0.4-1 [304 kB] Get:3272 http://deb.debian.org/debian sid/main amd64 r-bioc-geoquery all 2.74.0+dfsg-2 [13.7 MB] Get:3273 http://deb.debian.org/debian sid/main amd64 r-bioc-rhdf5lib amd64 1.28.0+dfsg-2 [104 kB] Get:3274 http://deb.debian.org/debian sid/main amd64 r-bioc-rhdf5filters amd64 1.18.1+dfsg-1 [139 kB] Get:3275 http://deb.debian.org/debian sid/main amd64 r-bioc-rhdf5 amd64 2.50.2+dfsg-1 [865 kB] Get:3276 http://deb.debian.org/debian sid/main amd64 r-bioc-hdf5array amd64 1.34.0-2 [8788 kB] Get:3277 http://deb.debian.org/debian sid/main amd64 r-bioc-singlecellexperiment all 1.28.1+ds-2 [835 kB] Get:3278 http://deb.debian.org/debian sid/main amd64 r-bioc-glmgampoi amd64 1.18.0+dfsg-2 [1279 kB] Get:3279 http://deb.debian.org/debian sid/main amd64 r-cran-biasedurn amd64 2.0.12-1 [278 kB] Get:3280 http://deb.debian.org/debian sid/main amd64 r-bioc-goseq all 1.58.0-2 [1886 kB] Get:3281 http://deb.debian.org/debian sid/main amd64 r-bioc-hilbertvis amd64 1.64.0-2 [1118 kB] Get:3282 http://deb.debian.org/debian sid/main amd64 r-bioc-hsmmsinglecell all 1.26.0-2 [16.8 MB] Get:3283 http://deb.debian.org/debian sid/main amd64 r-bioc-htsfilter all 1.46.0+dfsg-2 [164 kB] Get:3284 http://deb.debian.org/debian sid/main amd64 r-bioc-impute amd64 1.80.0-2 [665 kB] Get:3285 http://deb.debian.org/debian sid/main amd64 r-cran-credentials all 2.0.2-1 [217 kB] Get:3286 http://deb.debian.org/debian sid/main amd64 r-cran-gert amd64 2.1.4+dfsg-1 [251 kB] Get:3287 http://deb.debian.org/debian sid/main amd64 r-cran-gitcreds all 0.1.2-1 [92.7 kB] Get:3288 http://deb.debian.org/debian sid/main amd64 r-cran-ini all 0.3.1-2 [15.6 kB] Get:3289 http://deb.debian.org/debian sid/main amd64 r-cran-gh all 1.4.1-1 [126 kB] Get:3290 http://deb.debian.org/debian sid/main amd64 r-cran-whisker all 0.4.1-1 [62.3 kB] Get:3291 http://deb.debian.org/debian sid/main amd64 r-cran-usethis all 3.1.0-1 [944 kB] Get:3292 http://deb.debian.org/debian sid/main amd64 r-cran-cmdfun all 1.0.2-2 [92.1 kB] Get:3293 http://deb.debian.org/debian sid/main amd64 r-bioc-megadepth all 1.16.0+ds-2 [86.3 kB] Get:3294 http://deb.debian.org/debian sid/main amd64 r-bioc-mergeomics all 1.34.0-2 [2790 kB] Get:3295 http://deb.debian.org/debian sid/main amd64 r-cran-glmnet amd64 4.1-8-1 [1926 kB] Get:3296 http://deb.debian.org/debian sid/main amd64 r-bioc-wrench all 1.24.0+dfsg-2 [59.3 kB] Get:3297 http://deb.debian.org/debian sid/main amd64 r-bioc-metagenomeseq all 1.48.1-1 [2140 kB] Get:3298 http://deb.debian.org/debian sid/main amd64 r-cran-beeswarm amd64 0.4.0-1+b1 [82.4 kB] Get:3299 http://deb.debian.org/debian sid/main amd64 r-cran-vipor all 0.4.7-1 [4509 kB] Get:3300 http://deb.debian.org/debian sid/main amd64 r-cran-ggbeeswarm all 0.7.2-1 [1738 kB] Get:3301 http://deb.debian.org/debian sid/main amd64 r-cran-patchwork all 1.3.0-1 [3407 kB] Get:3302 http://deb.debian.org/debian sid/main amd64 r-cran-ggstats all 0.7.0-2 [1107 kB] Get:3303 http://deb.debian.org/debian sid/main amd64 r-cran-ggally all 2.2.1-1 [2022 kB] Get:3304 http://deb.debian.org/debian sid/main amd64 r-bioc-multiassayexperiment all 1.32.0+dfsg-2 [1091 kB] Get:3305 http://deb.debian.org/debian sid/main amd64 r-cran-doparallel all 1.0.17-1 [188 kB] Get:3306 http://deb.debian.org/debian sid/main amd64 r-cran-rcpptoml amd64 0.2.3+dfsg-1 [114 kB] Get:3307 http://deb.debian.org/debian sid/main amd64 r-cran-here all 1.0.1-2 [48.7 kB] Get:3308 http://deb.debian.org/debian sid/main amd64 r-cran-reticulate amd64 1.41.0.1+dfsg-1 [1569 kB] Get:3309 http://deb.debian.org/debian sid/main amd64 r-bioc-mofa all 1.6.1+dfsg-15 [582 kB] Get:3310 http://deb.debian.org/debian sid/main amd64 r-cran-vgam amd64 1.1-13-1 [7791 kB] Get:3311 http://deb.debian.org/debian sid/main amd64 r-cran-ddrtree amd64 0.1.5-2 [154 kB] Get:3312 http://deb.debian.org/debian sid/main amd64 r-cran-igraph amd64 2.1.4-1 [5138 kB] Get:3313 http://deb.debian.org/debian sid/main amd64 r-cran-combinat all 0.0-8-7 [42.8 kB] Get:3314 http://deb.debian.org/debian sid/main amd64 r-cran-fastica amd64 1.2-7-1 [43.0 kB] Get:3315 http://deb.debian.org/debian sid/main amd64 r-cran-rtsne amd64 0.17-1 [105 kB] Get:3316 http://deb.debian.org/debian sid/main amd64 r-cran-leidenbase amd64 0.1.32-1 [2308 kB] Get:3317 http://deb.debian.org/debian sid/main amd64 r-cran-slam amd64 0.1-55-1 [187 kB] Get:3318 http://deb.debian.org/debian sid/main amd64 r-cran-rann amd64 2.6.2-1 [44.8 kB] Get:3319 http://deb.debian.org/debian sid/main amd64 r-bioc-monocle amd64 2.34.0-2 [1521 kB] Get:3320 http://deb.debian.org/debian sid/main amd64 r-cran-registry all 0.5-1-2 [202 kB] Get:3321 http://deb.debian.org/debian sid/main amd64 r-cran-rngtools all 1.5.2-1 [83.4 kB] Get:3322 http://deb.debian.org/debian sid/main amd64 r-cran-nmf amd64 0.28-1 [3040 kB] Get:3323 http://deb.debian.org/debian sid/main amd64 r-cran-ggdendro all 0.2.0+dfsg-1 [184 kB] Get:3324 http://deb.debian.org/debian sid/main amd64 r-cran-ggalluvial all 0.12.5-2 [1889 kB] Get:3325 http://deb.debian.org/debian sid/main amd64 r-bioc-mutationalpatterns all 3.16.0+dfsg-2 [2490 kB] Get:3326 http://deb.debian.org/debian sid/main amd64 r-bioc-pcamethods amd64 1.98.0-2 [1396 kB] Get:3327 http://deb.debian.org/debian sid/main amd64 r-cran-pixmap all 0.4-13-1 [211 kB] Get:3328 http://deb.debian.org/debian sid/main amd64 r-cran-sp amd64 1:2.2-0+dfsg-1 [1445 kB] Get:3329 http://deb.debian.org/debian sid/main amd64 r-cran-ade4 amd64 1.7-23-1 [5403 kB] Get:3330 http://deb.debian.org/debian sid/main amd64 r-cran-ape amd64 5.8-1-1 [2910 kB] Get:3331 http://deb.debian.org/debian sid/main amd64 r-cran-permute all 0.9-7-1 [225 kB] Get:3332 http://deb.debian.org/debian sid/main amd64 r-cran-vegan amd64 2.6-10+dfsg-1 [3138 kB] Get:3333 http://deb.debian.org/debian sid/main amd64 r-bioc-phyloseq all 1.50.0+dfsg-2 [2255 kB] Get:3334 http://deb.debian.org/debian sid/main amd64 r-bioc-qvalue all 2.38.0-2 [2814 kB] Get:3335 http://deb.debian.org/debian sid/main amd64 r-bioc-rots amd64 1.34.0-2 [536 kB] Get:3336 http://deb.debian.org/debian sid/main amd64 r-bioc-scuttle amd64 1.16.0+dfsg-3 [450 kB] Get:3337 http://deb.debian.org/debian sid/main amd64 r-cran-rcppml amd64 0.3.7-2 [173 kB] Get:3338 http://deb.debian.org/debian sid/main amd64 r-cran-fnn amd64 1.1.4.1-1 [125 kB] Get:3339 http://deb.debian.org/debian sid/main amd64 r-cran-rcppannoy amd64 0.0.22-1 [227 kB] Get:3340 http://deb.debian.org/debian sid/main amd64 r-cran-rspectra amd64 0.16-2-1 [427 kB] Get:3341 http://deb.debian.org/debian sid/main amd64 r-cran-sitmo amd64 2.0.2-1+b1 [130 kB] Get:3342 http://deb.debian.org/debian sid/main amd64 r-cran-dqrng amd64 0.3.2+dfsg-1 [133 kB] Get:3343 http://deb.debian.org/debian sid/main amd64 r-cran-rcppprogress all 0.4.2-2 [21.8 kB] Get:3344 http://deb.debian.org/debian sid/main amd64 r-cran-uwot amd64 0.2.3-1 [970 kB] Get:3345 http://deb.debian.org/debian sid/main amd64 r-cran-cairo amd64 1.6-2-1 [79.0 kB] Get:3346 http://deb.debian.org/debian sid/main amd64 r-cran-systemfonts amd64 1.2.1-1 [303 kB] Get:3347 http://deb.debian.org/debian sid/main amd64 r-cran-textshaping amd64 0.3.7-2 [91.3 kB] Get:3348 http://deb.debian.org/debian sid/main amd64 r-cran-ragg amd64 1.3.3-1 [511 kB] Get:3349 http://deb.debian.org/debian sid/main amd64 r-cran-ggrastr all 1.0.2-1 [2587 kB] Get:3350 http://deb.debian.org/debian sid/main amd64 r-bioc-scater all 1.34.1+ds-1 [553 kB] Get:3351 http://deb.debian.org/debian sid/main amd64 r-bioc-seqlogo all 1.72.0+dfsg-2 [165 kB] Get:3352 http://deb.debian.org/debian sid/main amd64 r-cran-tfmpvalue amd64 0.0.9-1 [53.4 kB] Get:3353 http://deb.debian.org/debian sid/main amd64 r-bioc-tfbstools amd64 1.44.0+dfsg-2 [1024 kB] Get:3354 http://deb.debian.org/debian sid/main amd64 r-cran-expint amd64 0.1-8-1 [209 kB] Get:3355 http://deb.debian.org/debian sid/main amd64 r-cran-actuar amd64 3.3-5-1 [1427 kB] Get:3356 http://deb.debian.org/debian sid/main amd64 r-cran-segmented all 2.1-4-1 [1378 kB] Get:3357 http://deb.debian.org/debian sid/main amd64 r-cran-seqinr amd64 4.2-36-1 [4002 kB] Get:3358 http://deb.debian.org/debian sid/main amd64 r-cran-adegenet amd64 2.1.11-1 [2737 kB] Get:3359 http://deb.debian.org/debian sid/main amd64 r-cran-adegraphics all 1.0-21-1 [3251 kB] Get:3360 http://deb.debian.org/debian sid/main amd64 r-cran-rncl amd64 0.8.7-1 [481 kB] Get:3361 http://deb.debian.org/debian sid/main amd64 r-cran-uuid amd64 1.2-1-1 [46.7 kB] Get:3362 http://deb.debian.org/debian sid/main amd64 r-cran-rnexml all 2.4.11+ds-1 [742 kB] Get:3363 http://deb.debian.org/debian sid/main amd64 r-cran-phylobase amd64 0.8.12-1 [690 kB] Get:3364 http://deb.debian.org/debian sid/main amd64 r-cran-adephylo amd64 1.1-17-1 [605 kB] Get:3365 http://deb.debian.org/debian sid/main amd64 r-cran-admisc amd64 0.37-1 [369 kB] Get:3366 http://deb.debian.org/debian sid/main amd64 r-cran-aer all 1.2-14-1 [2609 kB] Get:3367 http://deb.debian.org/debian sid/main amd64 r-cran-lmertest all 3.1-3-2 [545 kB] Get:3368 http://deb.debian.org/debian sid/main amd64 r-cran-afex all 1.4-1-3 [3481 kB] Get:3369 http://deb.debian.org/debian sid/main amd64 r-cran-airr all 1.5.0+dfsg-1 [331 kB] Get:3370 http://deb.debian.org/debian sid/main amd64 r-cran-alakazam amd64 1.3.0-1 [2419 kB] Get:3371 http://deb.debian.org/debian sid/main amd64 r-cran-amelia amd64 1.8.3-1 [1437 kB] Get:3372 http://deb.debian.org/debian sid/main amd64 r-cran-apcluster amd64 1.4.13-1 [1397 kB] Get:3373 http://deb.debian.org/debian sid/main amd64 r-cran-classint amd64 0.4-11+dfsg-1 [112 kB] Get:3374 http://deb.debian.org/debian sid/main amd64 r-cran-wk amd64 0.9.4-1 [1789 kB] Get:3375 http://deb.debian.org/debian sid/main amd64 r-cran-s2 amd64 1.1.7-1 [1975 kB] Get:3376 http://deb.debian.org/debian sid/main amd64 r-cran-units amd64 0.8-7+dfsg-1 [292 kB] Get:3377 http://deb.debian.org/debian sid/main amd64 r-cran-sf amd64 1.0-19+dfsg-1 [3198 kB] Get:3378 http://deb.debian.org/debian sid/main amd64 r-cran-areal all 0.1.8+dfsg-2 [1121 kB] Get:3379 http://deb.debian.org/debian sid/main amd64 r-cran-findpython all 1.0.9-1 [25.1 kB] Get:3380 http://deb.debian.org/debian sid/main amd64 r-cran-argparse all 2.2.5+dfsg-1 [143 kB] Get:3381 http://deb.debian.org/debian sid/main amd64 r-cran-argparser all 0.7.2-1 [58.3 kB] Get:3382 http://deb.debian.org/debian sid/main amd64 r-cran-coda all 0.19-4.1-1 [329 kB] Get:3383 http://deb.debian.org/debian sid/main amd64 r-cran-arm all 1.14-4-1 [429 kB] Get:3384 http://deb.debian.org/debian sid/main amd64 r-cran-assertthat all 0.2.1-2 [56.5 kB] Get:3385 http://deb.debian.org/debian sid/main amd64 r-cran-av amd64 0.9.0+dfsg-1+b1 [81.5 kB] Get:3386 http://deb.debian.org/debian sid/main amd64 r-cran-base64url amd64 1.4-2+b1 [26.4 kB] Get:3387 http://deb.debian.org/debian sid/main amd64 r-cran-bbmisc amd64 1.13-1 [317 kB] Get:3388 http://deb.debian.org/debian sid/main amd64 r-cran-brew all 1.0-10-1 [70.1 kB] Get:3389 http://deb.debian.org/debian sid/main amd64 r-cran-sendmailr all 1.4-0-1 [58.3 kB] Get:3390 http://deb.debian.org/debian sid/main amd64 r-cran-batchjobs all 1.9-1 [503 kB] Get:3391 http://deb.debian.org/debian sid/main amd64 r-cran-batchtools amd64 0.9.17+dfsg-1 [712 kB] Get:3392 http://deb.debian.org/debian sid/main amd64 r-cran-pbapply all 1.7-2-1 [103 kB] Get:3393 http://deb.debian.org/debian sid/main amd64 r-cran-elliptic all 1.4-0-2 [1240 kB] Get:3394 http://deb.debian.org/debian sid/main amd64 r-cran-contfrac amd64 1.1-12-2 [26.5 kB] Get:3395 http://deb.debian.org/debian sid/main amd64 r-cran-desolve amd64 1.40-1 [2236 kB] Get:3396 http://deb.debian.org/debian sid/main amd64 r-cran-hypergeo all 1.2-13-4 [361 kB] Get:3397 http://deb.debian.org/debian sid/main amd64 r-cran-bayesfactor amd64 0.9.12-4.7+dfsg-1 [950 kB] Get:3398 http://deb.debian.org/debian sid/main amd64 r-cran-bayesfm amd64 0.1.7-1 [201 kB] Get:3399 http://deb.debian.org/debian sid/main amd64 r-cran-ggridges all 0.5.6-1 [2204 kB] Get:3400 http://deb.debian.org/debian sid/main amd64 r-cran-tensora amd64 0.36.2.1-1 [223 kB] Get:3401 http://deb.debian.org/debian sid/main amd64 r-cran-distributional all 0.5.0-1 [477 kB] Get:3402 http://deb.debian.org/debian sid/main amd64 r-cran-posterior all 1.6.1+dfsg-1 [933 kB] Get:3403 http://deb.debian.org/debian sid/main amd64 r-cran-bayesplot all 1.11.1-1 [5279 kB] Get:3404 http://deb.debian.org/debian sid/main amd64 r-cran-insight all 1.1.0+dfsg-1 [2192 kB] Get:3405 http://deb.debian.org/debian sid/main amd64 r-cran-datawizard all 1.0.1+dfsg-1 [1189 kB] Get:3406 http://deb.debian.org/debian sid/main amd64 r-cran-bayestestr all 0.15.2-1 [1083 kB] Get:3407 http://deb.debian.org/debian sid/main amd64 r-cran-bdsmatrix amd64 1.3-7-1 [300 kB] Get:3408 http://deb.debian.org/debian sid/main amd64 r-cran-bbmle all 1.0.25.1-1 [859 kB] Get:3409 http://deb.debian.org/debian sid/main amd64 r-cran-profmem all 0.6.0+dfsg-1 [46.5 kB] Get:3410 http://deb.debian.org/debian sid/main amd64 r-cran-bench amd64 1.1.4-1 [399 kB] Get:3411 http://deb.debian.org/debian sid/main amd64 r-cran-bigmemory.sri all 0.1.8-1 [13.2 kB] Get:3412 http://deb.debian.org/debian sid/main amd64 r-cran-bigmemory amd64 4.6.4-1 [452 kB] Get:3413 http://deb.debian.org/debian sid/main amd64 r-cran-bio3d amd64 2.4-5-1 [2981 kB] Get:3414 http://deb.debian.org/debian sid/main amd64 r-cran-blme all 1.0-6-1 [432 kB] Get:3415 http://deb.debian.org/debian sid/main amd64 r-cran-profilemodel all 0.6.1-1 [106 kB] Get:3416 http://deb.debian.org/debian sid/main amd64 r-cran-brglm amd64 0.7.2-1+b1 [125 kB] Get:3417 http://deb.debian.org/debian sid/main amd64 r-cran-qvcalc all 1.0.4-1 [51.4 kB] Get:3418 http://deb.debian.org/debian sid/main amd64 r-cran-bradleyterry2 all 1.1-2-2 [708 kB] Get:3419 http://deb.debian.org/debian sid/main amd64 r-cran-enrichwith all 0.3.1+dfsg-2 [213 kB] Get:3420 http://deb.debian.org/debian sid/main amd64 r-cran-brglm2 amd64 0.9.2+dfsg-1 [348 kB] Get:3421 http://deb.debian.org/debian sid/main amd64 r-cran-brobdingnag all 1.2-9-1 [940 kB] Get:3422 http://deb.debian.org/debian sid/main amd64 r-cran-bridgesampling all 1.1-2-1 [1476 kB] Get:3423 http://deb.debian.org/debian sid/main amd64 r-cran-rcppparallel amd64 5.1.7+dfsg-5+b2 [311 kB] Get:3424 http://deb.debian.org/debian sid/main amd64 r-cran-stanheaders amd64 2.32.10-1 [1323 kB] Get:3425 http://deb.debian.org/debian sid/main amd64 r-cran-loo all 2.8.0-1 [3071 kB] Get:3426 http://deb.debian.org/debian sid/main amd64 r-cran-quickjsr amd64 1.6.0-1 [656 kB] Get:3427 http://deb.debian.org/debian sid/main amd64 r-cran-rstan amd64 2.32.7-1 [2323 kB] Get:3428 http://deb.debian.org/debian sid/main amd64 r-cran-rstantools all 2.4.0-1 [174 kB] Get:3429 http://deb.debian.org/debian sid/main amd64 r-cran-nleqslv amd64 3.3.5-1 [99.5 kB] Get:3430 http://deb.debian.org/debian sid/main amd64 r-cran-brms all 2.22.0-1 [6803 kB] Get:3431 http://deb.debian.org/debian sid/main amd64 r-cran-cards all 0.5.1-1 [595 kB] Get:3432 http://deb.debian.org/debian sid/main amd64 r-cran-labelled all 2.14.0-1 [335 kB] Get:3433 http://deb.debian.org/debian sid/main amd64 r-cran-broom.helpers all 1.20.0-1 [612 kB] Get:3434 http://deb.debian.org/debian sid/main amd64 r-cran-furrr all 0.3.1-1 [1022 kB] Get:3435 http://deb.debian.org/debian sid/main amd64 r-cran-broom.mixed all 0.2.9.6-3 [5325 kB] Get:3436 http://deb.debian.org/debian sid/main amd64 r-cran-ca all 0.71.1-2 [242 kB] Get:3437 http://deb.debian.org/debian sid/main amd64 r-cran-rlrsim amd64 3.1-8-1 [93.2 kB] Get:3438 http://deb.debian.org/debian sid/main amd64 r-cran-caic4 all 1.0-1 [232 kB] Get:3439 http://deb.debian.org/debian sid/main amd64 r-cran-cba amd64 0.2-25-1 [260 kB] Get:3440 http://deb.debian.org/debian sid/main amd64 r-cran-cftime all 1.5.1-1 [862 kB] Get:3441 http://deb.debian.org/debian sid/main amd64 r-cran-chk all 0.10.0-1 [689 kB] Get:3442 http://deb.debian.org/debian sid/main amd64 r-cran-globaloptions all 0.1.2-1 [417 kB] Get:3443 http://deb.debian.org/debian sid/main amd64 r-cran-circlize all 0.4.16+dfsg-1 [3269 kB] Get:3444 http://deb.debian.org/debian sid/main amd64 r-cran-clubsandwich all 0.5.11-1 [637 kB] Get:3445 http://deb.debian.org/debian sid/main amd64 r-cran-clue amd64 0.3-66-1 [972 kB] Get:3446 http://deb.debian.org/debian sid/main amd64 r-cran-clustergeneration all 1.3.8-1 [267 kB] Get:3447 http://deb.debian.org/debian sid/main amd64 r-cran-cmprsk amd64 2.2-12-1 [104 kB] Get:3448 http://deb.debian.org/debian sid/main amd64 r-cran-collapse amd64 2.1.0-1 [3357 kB] Get:3449 http://deb.debian.org/debian sid/main amd64 r-cran-conflicted all 1.2.0-1.1 [60.8 kB] Get:3450 http://deb.debian.org/debian sid/main amd64 r-cran-rex all 1.2.1-1 [124 kB] Get:3451 http://deb.debian.org/debian sid/main amd64 r-cran-covr amd64 3.6.4+dfsg-1 [307 kB] Get:3452 http://deb.debian.org/debian sid/main amd64 r-cran-triebeard amd64 0.4.1-1 [154 kB] Get:3453 http://deb.debian.org/debian sid/main amd64 r-cran-urltools amd64 1.7.3+dfsg-2 [256 kB] Get:3454 http://deb.debian.org/debian sid/main amd64 r-cran-httpcode all 0.3.0-2 [34.3 kB] Get:3455 http://deb.debian.org/debian sid/main amd64 r-cran-crul all 1.5.0+dfsg-1 [856 kB] Get:3456 http://deb.debian.org/debian sid/main amd64 r-cran-cubelyr all 1.0.2-1 [346 kB] Get:3457 http://deb.debian.org/debian sid/main amd64 r-cran-gbutils all 0.5-3 [251 kB] Get:3458 http://deb.debian.org/debian sid/main amd64 r-cran-cvar all 0.5-2 [258 kB] Get:3459 http://deb.debian.org/debian sid/main amd64 r-cran-kernlab amd64 0.9-33-1 [1948 kB] Get:3460 http://deb.debian.org/debian sid/main amd64 r-cran-cvst all 0.2-3-1 [86.4 kB] Get:3461 http://deb.debian.org/debian sid/main amd64 r-cran-remotes all 2.5.0+dfsg-1 [449 kB] Get:3462 http://deb.debian.org/debian sid/main amd64 r-cran-cyclocomp all 1.1.1-1 [33.2 kB] Get:3463 http://deb.debian.org/debian sid/main amd64 r-cran-nanoarrow amd64 0.6.0-1 [372 kB] Get:3464 http://deb.debian.org/debian sid/main amd64 r-cran-palmerpenguins all 0.1.1-1 [2975 kB] Get:3465 http://deb.debian.org/debian sid/main amd64 r-cran-dbitest all 1.8.2-1 [1966 kB] Get:3466 http://deb.debian.org/debian sid/main amd64 r-cran-dbscan amd64 1.2.2+ds-2 [1263 kB] Get:3467 http://deb.debian.org/debian sid/main amd64 r-cran-deoptimr all 1.1-3-1-1 [76.7 kB] Get:3468 http://deb.debian.org/debian sid/main amd64 r-cran-robustbase amd64 0.99-4-1-1 [3050 kB] Get:3469 http://deb.debian.org/debian sid/main amd64 r-cran-sfsmisc all 1.1-20-1 [674 kB] Get:3470 http://deb.debian.org/debian sid/main amd64 r-cran-magic all 1.6-1-1 [400 kB] Get:3471 http://deb.debian.org/debian sid/main amd64 r-cran-lpsolve amd64 5.6.23-1 [326 kB] Get:3472 http://deb.debian.org/debian sid/main amd64 r-cran-linprog all 0.9-4-1 [75.0 kB] Get:3473 http://deb.debian.org/debian sid/main amd64 r-cran-geometry amd64 0.5.2-1 [885 kB] Get:3474 http://deb.debian.org/debian sid/main amd64 r-cran-ddalpha amd64 1.3.16-1 [1210 kB] Get:3475 http://deb.debian.org/debian sid/main amd64 r-cran-decor amd64 1.0.2-1 [32.6 kB] Get:3476 http://deb.debian.org/debian sid/main amd64 r-cran-dendextend all 1.19.0+dfsg-1 [1120 kB] Get:3477 http://deb.debian.org/debian sid/main amd64 r-cran-deoptim amd64 2.2-8-1 [120 kB] Get:3478 http://deb.debian.org/debian sid/main amd64 r-cran-downlit all 0.4.4-1 [127 kB] Get:3479 http://deb.debian.org/debian sid/main amd64 r-cran-pkgdown all 2.1.1-2 [1384 kB] Get:3480 http://deb.debian.org/debian sid/main amd64 r-cran-profvis amd64 0.4.0+dfsg-1 [201 kB] Get:3481 http://deb.debian.org/debian sid/main amd64 r-cran-sessioninfo all 1.2.3-1 [281 kB] Get:3482 http://deb.debian.org/debian sid/main amd64 r-cran-xopen all 1.0.1+dfsg-1 [21.4 kB] Get:3483 http://deb.debian.org/debian sid/main amd64 r-cran-rcmdcheck all 1.4.0-3 [209 kB] Get:3484 http://deb.debian.org/debian sid/main amd64 r-cran-roxygen2 amd64 7.3.2-1 [730 kB] Get:3485 http://deb.debian.org/debian sid/main amd64 r-cran-rversions all 2.1.2-1 [67.1 kB] Get:3486 http://deb.debian.org/debian sid/main amd64 r-cran-urlchecker all 1.0.1-2 [33.5 kB] Get:3487 http://deb.debian.org/debian sid/main amd64 r-cran-devtools all 2.4.5-1 [676 kB] Get:3488 http://deb.debian.org/debian sid/main amd64 r-cran-dfoptim all 2023.1.0-1 [75.1 kB] Get:3489 http://deb.debian.org/debian sid/main amd64 r-cran-gap.datasets all 0.0.6-1 [3446 kB] Get:3490 http://deb.debian.org/debian sid/main amd64 r-cran-gap amd64 1.6+dfsg-1+b1 [1096 kB] Get:3491 http://deb.debian.org/debian sid/main amd64 r-cran-qgam amd64 1.3.4-1+b1 [3968 kB] Get:3492 http://deb.debian.org/debian sid/main amd64 r-cran-dharma all 0.4.7-2 [3230 kB] Get:3493 http://deb.debian.org/debian sid/main amd64 r-cran-visnetwork all 2.1.2+ds-1 [2983 kB] Get:3494 http://deb.debian.org/debian sid/main amd64 r-cran-diagrammer all 1.0.11+ds-2 [1505 kB] Get:3495 http://deb.debian.org/debian sid/main amd64 r-cran-dicedesign amd64 1.10-1 [318 kB] Get:3496 http://deb.debian.org/debian sid/main amd64 r-cran-dials all 1.2.1-1 [427 kB] Get:3497 http://deb.debian.org/debian sid/main amd64 r-cran-drr all 0.0.4-2 [145 kB] Get:3498 http://deb.debian.org/debian sid/main amd64 r-cran-dimred amd64 0.2.6-4 [1561 kB] Get:3499 http://deb.debian.org/debian sid/main amd64 r-cran-diptest amd64 0.77-1-1 [183 kB] Get:3500 http://deb.debian.org/debian sid/main amd64 r-cran-distory amd64 1.4.5-1 [92.5 kB] Get:3501 http://deb.debian.org/debian sid/main amd64 r-cran-startupmsg all 1.0.0-1 [45.4 kB] Get:3502 http://deb.debian.org/debian sid/main amd64 r-cran-distr amd64 2.9.7+dfsg-1 [2172 kB] Get:3503 http://deb.debian.org/debian sid/main amd64 r-cran-docopt all 0.7.1-2 [249 kB] Get:3504 http://deb.debian.org/debian sid/main amd64 r-cran-domc all 1.3.8-1 [168 kB] Get:3505 http://deb.debian.org/debian sid/main amd64 r-cran-dorng all 1.8.6.1-1 [176 kB] Get:3506 http://deb.debian.org/debian sid/main amd64 r-cran-dotcall64 amd64 1.2-1 [34.5 kB] Get:3507 http://deb.debian.org/debian sid/main amd64 r-cran-dtplyr all 1.3.1-1 [375 kB] Get:3508 http://deb.debian.org/debian sid/main amd64 r-cran-dygraphs all 1.1.1.6+dfsg-4 [317 kB] Get:3509 http://deb.debian.org/debian sid/main amd64 r-cran-dynamictreecut all 1.63-1-3 [93.5 kB] Get:3510 http://deb.debian.org/debian sid/main amd64 r-cran-dynlm all 0.3.6-2 [54.5 kB] Get:3511 http://deb.debian.org/debian sid/main amd64 r-cran-eaf amd64 2.5.1-1 [2100 kB] Get:3512 http://deb.debian.org/debian sid/main amd64 r-cran-plotrix all 3.8-4-1 [1119 kB] Get:3513 http://deb.debian.org/debian sid/main amd64 r-cran-plotmo all 3.6.4-1 [1479 kB] Get:3514 http://deb.debian.org/debian sid/main amd64 r-cran-earth amd64 5.3.4-1 [1973 kB] Get:3515 http://deb.debian.org/debian sid/main amd64 r-cran-mitools all 2.4-2 [264 kB] Get:3516 http://deb.debian.org/debian sid/main amd64 r-cran-survey amd64 4.4-2-2 [3461 kB] Get:3517 http://deb.debian.org/debian sid/main amd64 r-cran-estimability all 1.5.1-1 [50.9 kB] Get:3518 http://deb.debian.org/debian sid/main amd64 r-cran-effects all 4.2.2-1 [2344 kB] Get:3519 http://deb.debian.org/debian sid/main amd64 r-cran-parameters all 0.24.2-2 [2188 kB] Get:3520 http://deb.debian.org/debian sid/main amd64 r-cran-performance all 0.13.0-2 [3125 kB] Get:3521 http://deb.debian.org/debian sid/main amd64 r-cran-effectsize all 1.0.0+dfsg-1 [756 kB] Get:3522 http://deb.debian.org/debian sid/main amd64 r-cran-egg all 0.4.5-3 [786 kB] Get:3523 http://deb.debian.org/debian sid/main amd64 r-cran-ellipse all 0.5.0-1 [217 kB] Get:3524 http://deb.debian.org/debian sid/main amd64 r-cran-emdbook all 1.3.13+ds-1 [202 kB] Get:3525 http://deb.debian.org/debian sid/main amd64 r-cran-emmeans all 1.10.7+dfsg-1 [1667 kB] Get:3526 http://deb.debian.org/debian sid/main amd64 r-cran-emoa amd64 0.5-3-1 [142 kB] Get:3527 http://deb.debian.org/debian sid/main amd64 r-cran-gsl amd64 2.1-8-1+b1 [482 kB] Get:3528 http://deb.debian.org/debian sid/main amd64 r-cran-energy amd64 1.7-12-1 [308 kB] Get:3529 http://deb.debian.org/debian sid/main amd64 r-cran-etm amd64 1.1.1-1 [476 kB] Get:3530 http://deb.debian.org/debian sid/main amd64 r-cran-epi amd64 2.59-1 [3422 kB] Get:3531 http://deb.debian.org/debian sid/main amd64 r-cran-pander amd64 0.6.6+dfsg-1 [870 kB] Get:3532 http://deb.debian.org/debian sid/main amd64 r-cran-fontbitstreamvera all 0.1.1+dfsg-5 [323 kB] Get:3533 http://deb.debian.org/debian sid/main amd64 r-cran-fontliberation all 0.1.0+dfsg-6 [2194 kB] Get:3534 http://deb.debian.org/debian sid/main amd64 r-cran-fontquiver all 0.2.1-4 [2131 kB] Get:3535 http://deb.debian.org/debian sid/main amd64 r-cran-gdtools amd64 0.4.1-1 [186 kB] Get:3536 http://deb.debian.org/debian sid/main amd64 r-cran-officer all 0.6.7+dfsg-1 [2022 kB] Get:3537 http://deb.debian.org/debian sid/main amd64 r-cran-flextable all 0.9.7-1 [2275 kB] Get:3538 http://deb.debian.org/debian sid/main amd64 r-cran-epir all 2.0.80+dfsg-1 [1089 kB] Get:3539 http://deb.debian.org/debian sid/main amd64 r-cran-estimatr amd64 1.0.6-1 [497 kB] Get:3540 http://deb.debian.org/debian sid/main amd64 r-cran-evd amd64 2.3-7.1-1 [1671 kB] Get:3541 http://deb.debian.org/debian sid/main amd64 r-cran-terra amd64 1.8-29-1 [4119 kB] Get:3542 http://deb.debian.org/debian sid/main amd64 r-cran-raster amd64 3.6-31-1 [3154 kB] Get:3543 http://deb.debian.org/debian sid/main amd64 r-cran-exactextractr amd64 0.10.0-1+b1 [591 kB] Get:3544 http://deb.debian.org/debian sid/main amd64 r-cran-expm amd64 1.0-0-1 [228 kB] Get:3545 http://deb.debian.org/debian sid/main amd64 r-cran-extradistr amd64 1.10.0-1 [557 kB] Get:3546 http://deb.debian.org/debian sid/main amd64 r-cran-flashclust amd64 1.01-2-3 [22.3 kB] Get:3547 http://deb.debian.org/debian sid/main amd64 r-cran-leaps amd64 3.2-1 [84.1 kB] Get:3548 http://deb.debian.org/debian sid/main amd64 r-cran-multcompview all 0.1-10-1 [117 kB] Get:3549 http://deb.debian.org/debian sid/main amd64 r-cran-scatterplot3d all 0.3-44-1 [353 kB] Get:3550 http://deb.debian.org/debian sid/main amd64 r-cran-factominer amd64 2.11-1 [3796 kB] Get:3551 http://deb.debian.org/debian sid/main amd64 r-cran-factoextra all 1.0.7-2 [415 kB] Get:3552 http://deb.debian.org/debian sid/main amd64 r-cran-fastdummies all 1.7.5-1 [50.5 kB] Get:3553 http://deb.debian.org/debian sid/main amd64 r-cran-fastmatch amd64 1.1-6-1 [35.4 kB] Get:3554 http://deb.debian.org/debian sid/main amd64 r-cran-fauxpas all 0.5.2+dfsg-1 [968 kB] Get:3555 http://deb.debian.org/debian sid/main amd64 r-cran-timeseries all 4041.111-1 [1892 kB] Get:3556 http://deb.debian.org/debian sid/main amd64 r-cran-gss amd64 2.2-8-1 [1677 kB] Get:3557 http://deb.debian.org/debian sid/main amd64 r-cran-stabledist all 0.7-2-1 [80.6 kB] Get:3558 http://deb.debian.org/debian sid/main amd64 r-cran-fbasics amd64 4041.97-1 [1509 kB] Get:3559 http://deb.debian.org/debian sid/main amd64 r-cran-ff amd64 4.5.2+ds-1 [1003 kB] Get:3560 http://deb.debian.org/debian sid/main amd64 r-cran-fgarch amd64 4033.92-1 [672 kB] Get:3561 http://deb.debian.org/debian sid/main amd64 r-cran-spam amd64 2.11-1-1 [2742 kB] Get:3562 http://deb.debian.org/debian sid/main amd64 r-cran-maps amd64 3.4.2.1-1 [2017 kB] Get:3563 http://deb.debian.org/debian sid/main amd64 r-cran-fields amd64 16.3.1-1 [3769 kB] Get:3564 http://deb.debian.org/debian sid/main amd64 r-cran-filehash amd64 2.4-6-1 [366 kB] Get:3565 http://deb.debian.org/debian sid/main amd64 r-cran-fit.models all 0.64-1 [143 kB] Get:3566 http://deb.debian.org/debian sid/main amd64 r-cran-fitdistrplus all 1.2-2-1 [2418 kB] Get:3567 http://deb.debian.org/debian sid/main amd64 r-cran-flexmix all 2.3-20-1 [1706 kB] Get:3568 http://deb.debian.org/debian sid/main amd64 r-cran-formattable all 0.2.1+dfsg-1 [156 kB] Get:3569 http://deb.debian.org/debian sid/main amd64 r-cran-mclust amd64 6.1.1-1 [3981 kB] Get:3570 http://deb.debian.org/debian sid/main amd64 r-cran-prabclus all 2.3-4-1 [533 kB] Get:3571 http://deb.debian.org/debian sid/main amd64 r-cran-fpc all 2.2-13-1 [891 kB] Get:3572 http://deb.debian.org/debian sid/main amd64 r-cran-g.data all 2.4.1-1 [133 kB] Get:3573 http://deb.debian.org/debian sid/main amd64 r-cran-gamm4 all 0.2-6-2 [59.1 kB] Get:3574 http://deb.debian.org/debian sid/main amd64 r-cran-gargle all 1.5.2-1 [736 kB] Get:3575 http://deb.debian.org/debian sid/main amd64 r-cran-gbm amd64 2.2.2-1 [582 kB] Get:3576 http://deb.debian.org/debian sid/main amd64 r-cran-gbrd amd64 0.4.12-1 [47.1 kB] Get:3577 http://deb.debian.org/debian sid/main amd64 r-cran-gclus all 1.3.2-2 [406 kB] Get:3578 http://deb.debian.org/debian sid/main amd64 r-cran-gee amd64 4.13-29-1 [73.8 kB] Get:3579 http://deb.debian.org/debian sid/main amd64 r-cran-geepack amd64 1.3.12-1 [387 kB] Get:3580 http://deb.debian.org/debian sid/main amd64 r-cran-genabel.data all 1.0.0-4 [2424 kB] Get:3581 http://deb.debian.org/debian sid/main amd64 r-cran-genabel amd64 1.8-0-7 [3308 kB] Get:3582 http://deb.debian.org/debian sid/main amd64 r-cran-genoplotr all 0.8.11+dfsg-2 [875 kB] Get:3583 http://deb.debian.org/debian sid/main amd64 r-cran-geosphere amd64 1.5-20-1 [1145 kB] Get:3584 http://deb.debian.org/debian sid/main amd64 r-cran-gfonts all 0.2.0-3 [2531 kB] Get:3585 http://deb.debian.org/debian sid/main amd64 r-cran-tweenr amd64 2.0.3-1 [428 kB] Get:3586 http://deb.debian.org/debian sid/main amd64 r-cran-transformr amd64 0.1.5-1 [164 kB] Get:3587 http://deb.debian.org/debian sid/main amd64 r-cran-gganimate all 1.0.9-1 [1834 kB] Get:3588 http://deb.debian.org/debian sid/main amd64 r-cran-ggeffects all 2.2.1+dfsg-1 [875 kB] Get:3589 http://deb.debian.org/debian sid/main amd64 r-cran-polyclip amd64 1.10-7-1 [113 kB] Get:3590 http://deb.debian.org/debian sid/main amd64 r-cran-ggforce amd64 0.4.2-1 [1815 kB] Get:3591 http://deb.debian.org/debian sid/main amd64 r-cran-ggfortify all 0.4.17+dfsg-1 [534 kB] Get:3592 http://deb.debian.org/debian sid/main amd64 r-cran-ggseqlogo all 0.2-1 [742 kB] Get:3593 http://deb.debian.org/debian sid/main amd64 r-cran-ggthemes all 5.1.0-1 [437 kB] Get:3594 http://deb.debian.org/debian sid/main amd64 r-cran-git2r amd64 0.35.0-1 [439 kB] Get:3595 http://deb.debian.org/debian sid/main amd64 r-cran-tmb amd64 1.9.17-1 [1135 kB] Get:3596 http://deb.debian.org/debian sid/main amd64 r-cran-glmmtmb amd64 1.1.10+dfsg-1 [5715 kB] Get:3597 http://deb.debian.org/debian sid/main amd64 r-cran-gmm amd64 1.8-1 [1419 kB] Get:3598 http://deb.debian.org/debian sid/main amd64 r-cran-gmp amd64 0.7-5-1 [309 kB] Get:3599 http://deb.debian.org/debian sid/main amd64 r-cran-goftest amd64 1.2-3-1+b1 [59.6 kB] Get:3600 http://deb.debian.org/debian sid/main amd64 r-cran-googledrive all 2.1.1-3 [1245 kB] Get:3601 http://deb.debian.org/debian sid/main amd64 r-cran-ids all 1.0.1-2 [124 kB] Get:3602 http://deb.debian.org/debian sid/main amd64 r-cran-rematch2 all 2.1.2-2 [46.3 kB] Get:3603 http://deb.debian.org/debian sid/main amd64 r-cran-googlesheets4 all 1.1.1-1 [529 kB] Get:3604 http://deb.debian.org/debian sid/main amd64 r-cran-googlevis all 0.7.3+dfsg-1 [441 kB] Get:3605 http://deb.debian.org/debian sid/main amd64 r-cran-goplot all 1.0.2-2 [2427 kB] Get:3606 http://deb.debian.org/debian sid/main amd64 r-cran-gparotation all 2024.3-1-1 [418 kB] Get:3607 http://deb.debian.org/debian sid/main amd64 r-cran-gridgraphics all 0.5-1-1 [248 kB] Get:3608 http://deb.debian.org/debian sid/main amd64 r-cran-gridsvg all 1.7-5-1 [1393 kB] Get:3609 http://deb.debian.org/debian sid/main amd64 r-cran-gsa all 1.03.3-1 [102 kB] Get:3610 http://deb.debian.org/debian sid/main amd64 r-cran-sftime all 0.2-0-6 [168 kB] Get:3611 http://deb.debian.org/debian sid/main amd64 r-cran-intervals amd64 0.15.5-1 [601 kB] Get:3612 http://deb.debian.org/debian sid/main amd64 r-cran-spacetime all 1.3-3-1 [2788 kB] Get:3613 http://deb.debian.org/debian sid/main amd64 r-cran-stars all 0.6-8-1 [4352 kB] Get:3614 http://deb.debian.org/debian sid/main amd64 r-cran-gstat amd64 2.1-3-1 [2330 kB] Get:3615 http://deb.debian.org/debian sid/main amd64 r-cran-hdf5r amd64 1.3.12+dfsg-1 [1966 kB] Get:3616 http://deb.debian.org/debian sid/main amd64 r-cran-qap amd64 0.1-2-1 [344 kB] Get:3617 http://deb.debian.org/debian sid/main amd64 r-cran-tsp amd64 1.2-4-1 [626 kB] Get:3618 http://deb.debian.org/debian sid/main amd64 r-cran-seriation amd64 1.5.7-1 [1361 kB] Get:3619 http://deb.debian.org/debian sid/main amd64 r-cran-webshot all 0.5.5-1 [189 kB] Get:3620 http://deb.debian.org/debian sid/main amd64 r-cran-heatmaply all 1.5.0+dfsg-1 [307 kB] Get:3621 http://deb.debian.org/debian sid/main amd64 r-cran-hexbin amd64 1.28.5-1 [1583 kB] Get:3622 http://deb.debian.org/debian sid/main amd64 r-cran-hsaur3 all 1.0-15-1 [2994 kB] Get:3623 http://deb.debian.org/debian sid/main amd64 r-cran-httptest2 all 1.1.0+ds-2 [149 kB] Get:3624 http://deb.debian.org/debian sid/main amd64 r-cran-hunspell amd64 3.0.5+dfsg-1 [2086 kB] Get:3625 http://deb.debian.org/debian sid/main amd64 r-cran-ica all 1.0-3-1 [86.7 kB] Get:3626 http://deb.debian.org/debian sid/main amd64 r-cran-statnet.common amd64 4.11.0-1 [280 kB] Get:3627 http://deb.debian.org/debian sid/main amd64 r-cran-network amd64 1.19.0-1 [849 kB] Get:3628 http://deb.debian.org/debian sid/main amd64 r-cran-intergraph all 2.0-4-2 [142 kB] Get:3629 http://deb.debian.org/debian sid/main amd64 r-cran-inum all 1.0-5-1 [45.0 kB] Get:3630 http://deb.debian.org/debian sid/main amd64 r-cran-spacefillr amd64 0.4.0-1 [4295 kB] Get:3631 http://deb.debian.org/debian sid/main amd64 r-cran-irace amd64 4.2.0-1 [1990 kB] Get:3632 http://deb.debian.org/debian sid/main amd64 r-cran-repr all 1.1.7-1 [138 kB] Get:3633 http://deb.debian.org/debian sid/main amd64 r-cran-irdisplay all 1.1-1 [35.2 kB] Get:3634 http://deb.debian.org/debian sid/main amd64 r-cran-isocodes all 2024.02.12-1 [313 kB] Get:3635 http://deb.debian.org/debian sid/main amd64 r-cran-itertools all 0.1-3-3 [111 kB] Get:3636 http://deb.debian.org/debian sid/main amd64 r-cran-ucminf amd64 1.2.2-1 [35.5 kB] Get:3637 http://deb.debian.org/debian sid/main amd64 r-cran-ordinal amd64 2023.12-4.1-1 [1274 kB] Get:3638 http://deb.debian.org/debian sid/main amd64 r-cran-jomo amd64 2.7-6-1 [2025 kB] Get:3639 http://deb.debian.org/debian sid/main amd64 r-cran-v8 amd64 6.0.2+dfsg-1 [110 kB] Get:3640 http://deb.debian.org/debian sid/main amd64 r-cran-jsonld all 2.2.1+dfsg-1 [70.3 kB] Get:3641 http://deb.debian.org/debian sid/main amd64 r-cran-svglite amd64 2.1.3-1+b1 [191 kB] Get:3642 http://deb.debian.org/debian sid/main amd64 r-cran-kableextra all 1.4.0+dfsg-1 [815 kB] Get:3643 http://deb.debian.org/debian sid/main amd64 r-cran-kaos all 0.1.2-2 [32.4 kB] Get:3644 http://deb.debian.org/debian sid/main amd64 r-cran-kmi all 0.5.5-2 [79.1 kB] Get:3645 http://deb.debian.org/debian sid/main amd64 r-cran-multicool amd64 1.0.1-1 [99.1 kB] Get:3646 http://deb.debian.org/debian sid/main amd64 r-cran-ks amd64 1.14.3-1 [1928 kB] Get:3647 http://deb.debian.org/debian sid/main amd64 r-cran-lamw amd64 2.2.4-1 [51.2 kB] Get:3648 http://deb.debian.org/debian sid/main amd64 r-cran-mnormt amd64 2.1.1-2 [171 kB] Get:3649 http://deb.debian.org/debian sid/main amd64 r-cran-pbivnorm amd64 0.6.0-4 [19.6 kB] Get:3650 http://deb.debian.org/debian sid/main amd64 r-cran-lavaan all 0.6.19-1 [3716 kB] Get:3651 http://deb.debian.org/debian sid/main amd64 r-cran-lavasearch2 amd64 2.0.3+dfsg-1 [1152 kB] Get:3652 http://deb.debian.org/debian sid/main amd64 r-cran-lbfgsb3c amd64 2024-3.5-1 [126 kB] Get:3653 http://deb.debian.org/debian sid/main amd64 r-cran-learnbayes all 2.15.1-4 [965 kB] Get:3654 http://deb.debian.org/debian sid/main amd64 r-cran-lhs amd64 1.2.0-1 [364 kB] Get:3655 http://deb.debian.org/debian sid/main amd64 r-cran-xmlparsedata all 1.0.5-2 [20.2 kB] Get:3656 http://deb.debian.org/debian sid/main amd64 r-cran-lintr all 3.2.0-1 [1472 kB] Get:3657 http://deb.debian.org/debian sid/main amd64 r-cran-lobstr amd64 1.1.2-1 [146 kB] Get:3658 http://deb.debian.org/debian sid/main amd64 r-cran-logcondens all 2.1.8-1 [562 kB] Get:3659 http://deb.debian.org/debian sid/main amd64 r-cran-logspline amd64 2.1.22-1 [158 kB] Get:3660 http://deb.debian.org/debian sid/main amd64 r-cran-lsmeans all 2.30-0-2 [43.9 kB] Get:3661 http://deb.debian.org/debian sid/main amd64 r-cran-minpack.lm amd64 1.2-4-1 [81.0 kB] Get:3662 http://deb.debian.org/debian sid/main amd64 r-cran-luminescence amd64 1.0.1-1 [5907 kB] Get:3663 http://deb.debian.org/debian sid/main amd64 r-cran-lwgeom amd64 0.2-14-1 [406 kB] Get:3664 http://deb.debian.org/debian sid/main amd64 r-cran-magick amd64 2.8.5+dfsg-1+b1 [508 kB] Get:3665 http://deb.debian.org/debian sid/main amd64 r-cran-mapdata amd64 2.3.1-1 [17.0 MB] Get:3666 http://deb.debian.org/debian sid/main amd64 r-cran-mapproj amd64 1.2.11-1 [52.9 kB] Get:3667 http://deb.debian.org/debian sid/main amd64 r-cran-maptree all 1.4-8-1 [148 kB] Get:3668 http://deb.debian.org/debian sid/main amd64 r-cran-marginaleffects amd64 0.25.0-1 [2101 kB] Get:3669 http://deb.debian.org/debian sid/main amd64 r-cran-markdown all 1.13-1 [162 kB] Get:3670 http://deb.debian.org/debian sid/main amd64 r-cran-matchit amd64 4.7.1-1 [1792 kB] Get:3671 http://deb.debian.org/debian sid/main amd64 r-cran-mathjaxr all 1.6-0-1 [604 kB] Get:3672 http://deb.debian.org/debian sid/main amd64 r-cran-misctools all 0.6-28-1 [99.2 kB] Get:3673 http://deb.debian.org/debian sid/main amd64 r-cran-maxlik all 1.5-2.1-1 [1089 kB] Get:3674 http://deb.debian.org/debian sid/main amd64 r-cran-memisc amd64 0.99.31.8.2+dfsg-1 [1752 kB] Get:3675 http://deb.debian.org/debian sid/main amd64 r-cran-mclogit all 0.9.6-2 [276 kB] Get:3676 http://deb.debian.org/debian sid/main amd64 r-cran-mda amd64 0.5-5-1 [732 kB] Get:3677 http://deb.debian.org/debian sid/main amd64 r-cran-mertools all 0.6.2-2 [670 kB] Get:3678 http://deb.debian.org/debian sid/main amd64 r-cran-metadat all 1.2-0-2 [831 kB] Get:3679 http://deb.debian.org/debian sid/main amd64 r-cran-metafor all 4.8-0-1 [5185 kB] Get:3680 http://deb.debian.org/debian sid/main amd64 r-cran-sn all 2.1.1-2 [1822 kB] Get:3681 http://deb.debian.org/debian sid/main amd64 r-cran-tfisher all 0.2.0-3 [79.2 kB] Get:3682 http://deb.debian.org/debian sid/main amd64 r-cran-mutoss all 0.1-13-1 [1127 kB] Get:3683 http://deb.debian.org/debian sid/main amd64 r-cran-qqconf amd64 1.3.2+dfsg-1 [154 kB] Get:3684 http://deb.debian.org/debian sid/main amd64 r-cran-metap all 1.12-1 [573 kB] Get:3685 http://deb.debian.org/debian sid/main amd64 r-cran-timereg amd64 2.0.6-1 [972 kB] Get:3686 http://deb.debian.org/debian sid/main amd64 r-cran-mets amd64 1.3.5+dfsg-1 [3981 kB] Get:3687 http://deb.debian.org/debian sid/main amd64 r-cran-pan amd64 1.9-1 [942 kB] Get:3688 http://deb.debian.org/debian sid/main amd64 r-cran-mitml all 0.4-5-1 [511 kB] Get:3689 http://deb.debian.org/debian sid/main amd64 r-cran-mice amd64 3.17.0-1 [1478 kB] Get:3690 http://deb.debian.org/debian sid/main amd64 r-cran-rgl amd64 1.3.17-1 [4067 kB] Get:3691 http://deb.debian.org/debian sid/main amd64 r-cran-misc3d all 0.9-1-1 [240 kB] Get:3692 http://deb.debian.org/debian sid/main amd64 r-cran-mixtools amd64 2.0.0.1-1 [1418 kB] Get:3693 http://deb.debian.org/debian sid/main amd64 r-cran-mlbench amd64 2.1-6-1 [1055 kB] Get:3694 http://deb.debian.org/debian sid/main amd64 r-cran-mlmetrics all 1.1.3-1 [74.7 kB] Get:3695 http://deb.debian.org/debian sid/main amd64 r-cran-mlmrev all 1.0-8-2 [1807 kB] Get:3696 http://deb.debian.org/debian sid/main amd64 r-cran-paramhelpers amd64 1.14.2-1 [466 kB] Get:3697 http://deb.debian.org/debian sid/main amd64 r-cran-parallelmap all 1.5.1-1 [111 kB] Get:3698 http://deb.debian.org/debian sid/main amd64 r-cran-mlr amd64 2.19.2+dfsg-1 [4971 kB] Get:3699 http://deb.debian.org/debian sid/main amd64 r-cran-mockery all 0.4.4+dfsg-1 [41.0 kB] Get:3700 http://deb.debian.org/debian sid/main amd64 r-cran-modeldata all 1.4.0-1 [5162 kB] Get:3701 http://deb.debian.org/debian sid/main amd64 r-cran-msm amd64 1.8.2-1 [1580 kB] Get:3702 http://deb.debian.org/debian sid/main amd64 r-cran-rcppcctz amd64 0.2.13-1 [141 kB] Get:3703 http://deb.debian.org/debian sid/main amd64 r-cran-rcppdate all 0.0.5-1 [60.7 kB] Get:3704 http://deb.debian.org/debian sid/main amd64 r-cran-nanotime amd64 0.3.11-1 [669 kB] Get:3705 http://deb.debian.org/debian sid/main amd64 r-cran-natserv all 1.0.0+dfsg-1 [210 kB] Get:3706 http://deb.debian.org/debian sid/main amd64 r-cran-ncdf4 amd64 1.23-1+b1 [278 kB] Get:3707 http://deb.debian.org/debian sid/main amd64 r-cran-rnetcdf amd64 2.9-2-1 [237 kB] Get:3708 http://deb.debian.org/debian sid/main amd64 r-cran-ncmeta all 0.4.0-1 [327 kB] Get:3709 http://deb.debian.org/debian sid/main amd64 r-cran-ncdfgeom all 1.1.6+dfsg-1 [4069 kB] Get:3710 http://deb.debian.org/debian sid/main amd64 r-cran-psych all 2.4.12-1 [3573 kB] Get:3711 http://deb.debian.org/debian sid/main amd64 r-cran-nfactors all 2.4.1.1-2 [210 kB] Get:3712 http://deb.debian.org/debian sid/main amd64 r-cran-nnls amd64 1.6-1 [38.7 kB] Get:3713 http://deb.debian.org/debian sid/main amd64 r-cran-optimparallel all 1.0-2-2 [206 kB] Get:3714 http://deb.debian.org/debian sid/main amd64 r-cran-optimx all 2024-12.2-1 [2532 kB] Get:3715 http://deb.debian.org/debian sid/main amd64 r-cran-packrat all 0.9.2-1 [685 kB] Get:3716 http://deb.debian.org/debian sid/main amd64 r-cran-polspline amd64 1.1.25-1 [581 kB] Get:3717 http://deb.debian.org/debian sid/main amd64 r-cran-rms amd64 7.0-0-1 [2307 kB] Get:3718 http://deb.debian.org/debian sid/main amd64 r-cran-publish all 2023.01.17-1 [466 kB] Get:3719 http://deb.debian.org/debian sid/main amd64 r-cran-ranger amd64 0.17.0-1 [467 kB] Get:3720 http://deb.debian.org/debian sid/main amd64 r-cran-riskregression amd64 2023.12.21+ds-1 [1611 kB] Get:3721 http://deb.debian.org/debian sid/main amd64 r-cran-pec amd64 2023.04.12-1 [510 kB] Get:3722 http://deb.debian.org/debian sid/main amd64 r-cran-pammtools all 0.5.93-1 [736 kB] Get:3723 http://deb.debian.org/debian sid/main amd64 r-cran-strucchange amd64 1.5-4-1 [947 kB] Get:3724 http://deb.debian.org/debian sid/main amd64 r-cran-party amd64 1.3-18-1 [1134 kB] Get:3725 http://deb.debian.org/debian sid/main amd64 r-cran-partykit amd64 1.2-23-1 [2358 kB] Get:3726 http://deb.debian.org/debian sid/main amd64 r-cran-patrick all 0.3.0-1 [24.8 kB] Get:3727 http://deb.debian.org/debian sid/main amd64 r-cran-pbmcapply amd64 1.5.1-1 [41.8 kB] Get:3728 http://deb.debian.org/debian sid/main amd64 r-cran-pcapp amd64 2.0-5-1 [368 kB] Get:3729 http://deb.debian.org/debian sid/main amd64 r-cran-pcict amd64 0.5-4.4-1 [94.6 kB] Get:3730 http://deb.debian.org/debian sid/main amd64 r-cran-qpdf amd64 1.3.4+dfsg-2+b1 [102 kB] Get:3731 http://deb.debian.org/debian sid/main amd64 r-cran-pdftools amd64 3.5.0-1 [1015 kB] Get:3732 http://deb.debian.org/debian sid/main amd64 r-cran-phangorn amd64 2.12.1+dfsg-1 [1819 kB] Get:3733 http://deb.debian.org/debian sid/main amd64 r-cran-phytools all 2.4-4-1 [2766 kB] Get:3734 http://deb.debian.org/debian sid/main amd64 r-cran-pingr amd64 2.0.5-1 [44.0 kB] Get:3735 http://deb.debian.org/debian sid/main amd64 r-cran-pkgmaker all 0.32.10-1 [683 kB] Get:3736 http://deb.debian.org/debian sid/main amd64 r-cran-pki amd64 0.1-14-1 [112 kB] Get:3737 http://deb.debian.org/debian sid/main amd64 r-cran-plm all 2.6-5-1 [1817 kB] Get:3738 http://deb.debian.org/debian sid/main amd64 r-cran-plot3d all 1.4.1-1 [2765 kB] Get:3739 http://deb.debian.org/debian sid/main amd64 r-cran-pls all 2.8-5-1 [4771 kB] Get:3740 http://deb.debian.org/debian sid/main amd64 r-cran-webutils amd64 1.2.2-1 [49.2 kB] Get:3741 http://deb.debian.org/debian sid/main amd64 r-cran-sodium amd64 1.4.0+dfsg-1 [63.3 kB] Get:3742 http://deb.debian.org/debian sid/main amd64 r-cran-swagger all 5.17.14.1-1 [1039 kB] Get:3743 http://deb.debian.org/debian sid/main amd64 r-cran-plumber all 1.3.0+ds-1 [1135 kB] Get:3744 http://deb.debian.org/debian sid/main amd64 r-cran-polycor all 0.8-1-1 [74.0 kB] Get:3745 http://deb.debian.org/debian sid/main amd64 r-cran-poorman all 0.2.7+dfsg-1 [376 kB] Get:3746 http://deb.debian.org/debian sid/main amd64 r-cran-popepi all 0.4.13+dfsg-1 [1155 kB] Get:3747 http://deb.debian.org/debian sid/main amd64 r-cran-prediction all 0.3.18-1 [242 kB] Get:3748 http://deb.debian.org/debian sid/main amd64 r-cran-projpred amd64 2.8.0+dfsg-1 [986 kB] Get:3749 http://deb.debian.org/debian sid/main amd64 r-cran-r.cache all 0.16.0-1 [114 kB] Get:3750 http://deb.debian.org/debian sid/main amd64 r-cran-pscbs all 0.67.0-3 [4262 kB] Get:3751 http://deb.debian.org/debian sid/main amd64 r-cran-pscl amd64 1.5.9-1 [3386 kB] Get:3752 http://deb.debian.org/debian sid/main amd64 r-cran-psychotools amd64 0.7-4-1 [1098 kB] Get:3753 http://deb.debian.org/debian sid/main amd64 r-cran-psychotree all 0.16-1-1 [461 kB] Get:3754 http://deb.debian.org/debian sid/main amd64 r-cran-psychtools all 2.4.2-1 [3322 kB] Get:3755 http://deb.debian.org/debian sid/main amd64 r-cran-purrrlyr amd64 0.0.8-1 [103 kB] Get:3756 http://deb.debian.org/debian sid/main amd64 r-cran-pvclust all 2.2-0-2 [185 kB] Get:3757 http://deb.debian.org/debian sid/main amd64 r-cran-pwr all 1.3-0+dfsg-1 [109 kB] Get:3758 http://deb.debian.org/debian sid/main amd64 r-cran-qtl amd64 1.70-1 [5544 kB] Get:3759 http://deb.debian.org/debian sid/main amd64 r-cran-r.devices all 2.17.2+ds-1 [400 kB] Get:3760 http://deb.debian.org/debian sid/main amd64 tcl8.6 amd64 8.6.16+dfsg-1 [121 kB] Get:3761 http://deb.debian.org/debian sid/main amd64 tcl amd64 8.6.16 [4096 B] Get:3762 http://deb.debian.org/debian sid/main amd64 r-cran-r.rsp all 0.46.0+ds-1 [1405 kB] Get:3763 http://deb.debian.org/debian sid/main amd64 r-cran-randomforest amd64 4.7-1.2-1 [216 kB] Get:3764 http://deb.debian.org/debian sid/main amd64 r-cran-ratelimitr all 0.4.1-2 [44.3 kB] Get:3765 http://deb.debian.org/debian sid/main amd64 r-cran-rcarb all 0.1.6+dfsg-1 [114 kB] Get:3766 http://deb.debian.org/debian sid/main amd64 r-cran-rcpphnsw amd64 0.6.0+ds-1 [169 kB] Get:3767 http://deb.debian.org/debian sid/main amd64 r-cran-rcpproll amd64 0.3.1-1 [91.5 kB] Get:3768 http://deb.debian.org/debian sid/main amd64 r-cran-rcsdp amd64 0.1.57.5-1 [111 kB] Get:3769 http://deb.debian.org/debian sid/main amd64 r-cran-redland amd64 1.0.17-18-1 [723 kB] Get:3770 http://deb.debian.org/debian sid/main amd64 r-cran-rdflib all 0.2.9+dfsg-1 [152 kB] Get:3771 http://deb.debian.org/debian sid/main amd64 r-cran-relimp all 1.0-5-4 [78.1 kB] Get:3772 http://deb.debian.org/debian sid/main amd64 r-cran-relsurv amd64 2.3-2-1 [848 kB] Get:3773 http://deb.debian.org/debian sid/main amd64 r-cran-renv amd64 1.1.2-1 [2319 kB] Get:3774 http://deb.debian.org/debian sid/main amd64 r-cran-reprex all 2.1.1-1 [506 kB] Get:3775 http://deb.debian.org/debian sid/main amd64 r-cran-rgenoud amd64 5.9-0.11-1 [672 kB] Get:3776 http://deb.debian.org/debian sid/main amd64 r-cran-rhandsontable all 0.3.8+dfsg-1 [321 kB] Get:3777 http://deb.debian.org/debian sid/main amd64 r-cran-rhpcblasctl amd64 0.23-42-1+b1 [26.9 kB] Get:3778 http://deb.debian.org/debian sid/main amd64 r-cran-solrium all 1.2.0+dfsg-1 [395 kB] Get:3779 http://deb.debian.org/debian sid/main amd64 r-cran-ritis all 1.0.0-1 [195 kB] Get:3780 http://deb.debian.org/debian sid/main amd64 r-cran-rjags amd64 1:4-16-1 [132 kB] Get:3781 http://deb.debian.org/debian sid/main amd64 r-cran-rjava amd64 1.0-11-1 [702 kB] Get:3782 http://deb.debian.org/debian sid/main amd64 r-cran-shinydashboard all 0.7.2-1 [258 kB] Get:3783 http://deb.debian.org/debian sid/main amd64 r-cran-rlumshiny all 0.2.3-1 [281 kB] Get:3784 http://deb.debian.org/debian sid/main amd64 r-cran-rmariadb amd64 1.3.3+ds-1 [400 kB] Get:3785 http://deb.debian.org/debian sid/main amd64 r-cran-rmpfr amd64 1.0-0-1 [1254 kB] Get:3786 http://deb.debian.org/debian sid/main amd64 r-cran-rmpi amd64 0.7-3.3-1 [274 kB] Get:3787 http://deb.debian.org/debian sid/main amd64 r-cran-rmysql amd64 0.11.0-1 [285 kB] Get:3788 http://deb.debian.org/debian sid/main amd64 r-cran-robumeta all 2.1-1 [521 kB] Get:3789 http://deb.debian.org/debian sid/main amd64 r-cran-rrcov amd64 1.7-6-1 [2428 kB] Get:3790 http://deb.debian.org/debian sid/main amd64 r-cran-robust amd64 0.7-5-1 [640 kB] Get:3791 http://deb.debian.org/debian sid/main amd64 r-cran-rose all 0.0-4-2 [113 kB] Get:3792 http://deb.debian.org/debian sid/main amd64 r-cran-rotl all 3.1.0-1 [536 kB] Get:3793 http://deb.debian.org/debian sid/main amd64 r-cran-rpostgresql amd64 0.7-7+dfsg-1 [372 kB] Get:3794 http://deb.debian.org/debian sid/main amd64 r-cran-rredlist all 1.0.0-1 [1006 kB] Get:3795 http://deb.debian.org/debian sid/main amd64 r-cran-warp amd64 0.2.1-1 [70.4 kB] Get:3796 http://deb.debian.org/debian sid/main amd64 r-cran-slider amd64 0.3.2-1 [325 kB] Get:3797 http://deb.debian.org/debian sid/main amd64 r-cran-rsample all 1.2.1+dfsg-1 [429 kB] Get:3798 http://deb.debian.org/debian sid/main amd64 r-cran-rsconnect all 1.3.4-1 [841 kB] Get:3799 http://deb.debian.org/debian sid/main amd64 r-cran-truncnorm amd64 1.0-9-2 [24.4 kB] Get:3800 http://deb.debian.org/debian sid/main amd64 r-cran-rsolnp all 1.16+dfsg-4 [251 kB] Get:3801 http://deb.debian.org/debian sid/main amd64 r-cran-shinythemes all 1.2.0+dfsg-1 [428 kB] Get:3802 http://deb.debian.org/debian sid/main amd64 r-cran-threejs all 0.3.3+dfsg-2 [881 kB] Get:3803 http://deb.debian.org/debian sid/main amd64 r-cran-shinystan all 2.6.0-1 [2563 kB] Get:3804 http://deb.debian.org/debian sid/main amd64 r-cran-rstanarm amd64 2.32.1-2 [7736 kB] Get:3805 http://deb.debian.org/debian sid/main amd64 r-cran-rsvg amd64 2.6.1-1 [267 kB] Get:3806 http://deb.debian.org/debian sid/main amd64 r-cran-rtdists amd64 0.11-5-1 [742 kB] Get:3807 http://deb.debian.org/debian sid/main amd64 r-cran-rwiener amd64 1.3-3-1+b1 [107 kB] Get:3808 http://deb.debian.org/debian sid/main amd64 r-cran-s7 amd64 0.2.0-1+b1 [329 kB] Get:3809 http://deb.debian.org/debian sid/main amd64 r-cran-shinyfiles all 0.9.3-1 [408 kB] Get:3810 http://deb.debian.org/debian sid/main amd64 r-cran-samr amd64 3.0-2 [3884 kB] Get:3811 http://deb.debian.org/debian sid/main amd64 r-cran-scatterd3 all 1.0.1+dfsg-1 [140 kB] Get:3812 http://deb.debian.org/debian sid/main amd64 r-cran-scattermore amd64 1.2-1 [328 kB] Get:3813 http://deb.debian.org/debian sid/main amd64 r-cran-sctransform amd64 0.4.1-1 [499 kB] Get:3814 http://deb.debian.org/debian sid/main amd64 r-cran-sdmtools amd64 1.1-221.2-1+b1 [229 kB] Get:3815 http://deb.debian.org/debian sid/main amd64 r-cran-setrng all 2024.2-1-1 [55.8 kB] Get:3816 http://deb.debian.org/debian sid/main amd64 r-cran-seuratobject amd64 5.0.2-1 [1752 kB] Get:3817 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat.utils amd64 3.1-3-1 [386 kB] Get:3818 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat.data all 3.1-6-1 [4144 kB] Get:3819 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat.univar amd64 3.1-2-1 [316 kB] Get:3820 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat.geom amd64 3.3-6-1 [3963 kB] Get:3821 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat.random amd64 3.3-3-1 [1170 kB] Get:3822 http://deb.debian.org/debian sid/main amd64 r-cran-tensor all 1.5-4 [15.6 kB] Get:3823 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat.sparse amd64 3.1-0-1 [218 kB] Get:3824 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat.explore amd64 3.3-4-1 [3302 kB] Get:3825 http://deb.debian.org/debian sid/main amd64 r-cran-seurat amd64 5.2.1-4 [3281 kB] Get:3826 http://deb.debian.org/debian sid/main amd64 r-cran-shazam all 1.2.0-1 [2194 kB] Get:3827 http://deb.debian.org/debian sid/main amd64 r-cran-shinybs all 0.61.1-1 [103 kB] Get:3828 http://deb.debian.org/debian sid/main amd64 r-cran-sjlabelled all 1.2.0-1 [292 kB] Get:3829 http://deb.debian.org/debian sid/main amd64 r-cran-sjstats all 0.19.0-1 [383 kB] Get:3830 http://deb.debian.org/debian sid/main amd64 r-cran-sm amd64 2.2-6.0-1 [787 kB] Get:3831 http://deb.debian.org/debian sid/main amd64 r-cran-smcfcs all 1.9.2+dfsg-2 [375 kB] Get:3832 http://deb.debian.org/debian sid/main amd64 r-cran-sna amd64 2.8-1 [1271 kB] Get:3833 http://deb.debian.org/debian sid/main amd64 r-cran-snakecase all 0.11.1-1 [172 kB] Get:3834 http://deb.debian.org/debian sid/main amd64 r-cran-spdata all 2.3.4-1 [3575 kB] Get:3835 http://deb.debian.org/debian sid/main amd64 r-cran-spdep amd64 1.3-5+dfsg-1 [2187 kB] Get:3836 http://deb.debian.org/debian sid/main amd64 r-cran-spatialreg amd64 1.3-6+dfsg-1 [929 kB] Get:3837 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat.model amd64 3.3-4-1 [3418 kB] Get:3838 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat.linnet amd64 3.2-5-1 [1515 kB] Get:3839 http://deb.debian.org/debian sid/main amd64 r-cran-spatstat amd64 3.3-1-1 [4108 kB] Get:3840 http://deb.debian.org/debian sid/main amd64 r-cran-spelling all 2.3.1-1 [56.9 kB] Get:3841 http://deb.debian.org/debian sid/main amd64 r-cran-splines2 amd64 0.5.4-1 [1076 kB] Get:3842 http://deb.debian.org/debian sid/main amd64 r-cran-spp amd64 1.16.0-2 [323 kB] Get:3843 http://deb.debian.org/debian sid/main amd64 r-cran-stablelearner all 0.1-5+ds-1 [282 kB] Get:3844 http://deb.debian.org/debian sid/main amd64 r-cran-stringdist amd64 0.9.15-1 [585 kB] Get:3845 http://deb.debian.org/debian sid/main amd64 r-cran-svunit all 1.0.6-2 [592 kB] Get:3846 http://deb.debian.org/debian sid/main amd64 r-cran-systemfit all 1.1-30-1 [1177 kB] Get:3847 http://deb.debian.org/debian sid/main amd64 r-cran-worrms all 0.4.3+dfsg-1 [140 kB] Get:3848 http://deb.debian.org/debian sid/main amd64 r-cran-wikipedir all 1.7.1-1 [102 kB] Get:3849 http://deb.debian.org/debian sid/main amd64 r-cran-wikidataqueryservicer all 1.0.0-2 [26.9 kB] Get:3850 http://deb.debian.org/debian sid/main amd64 r-cran-wikidatar all 2.3.3-1 [1141 kB] Get:3851 http://deb.debian.org/debian sid/main amd64 r-cran-wikitaxa all 0.4.0+dfsg-1 [592 kB] Get:3852 http://deb.debian.org/debian sid/main amd64 r-cran-taxize all 0.10.0-1 [3292 kB] Get:3853 http://deb.debian.org/debian sid/main amd64 r-cran-tcr amd64 2.3.2+ds-1 [1959 kB] Get:3854 http://deb.debian.org/debian sid/main amd64 r-cran-testit all 0.13-1 [34.8 kB] Get:3855 http://deb.debian.org/debian sid/main amd64 r-cran-tgp amd64 2.4-23-1 [2964 kB] Get:3856 http://deb.debian.org/debian sid/main amd64 r-cran-thematic all 0.1.6-1 [2619 kB] Get:3857 http://deb.debian.org/debian sid/main amd64 r-cran-themis all 1.0.3-1 [335 kB] Get:3858 http://deb.debian.org/debian sid/main amd64 r-cran-tidyverse all 2.0.0+dfsg-2 [96.4 kB] Get:3859 http://deb.debian.org/debian sid/main amd64 r-cran-tiff amd64 0.1-12-1 [47.9 kB] Get:3860 http://deb.debian.org/debian sid/main amd64 r-cran-tigger all 1.1.0-1 [4100 kB] Get:3861 http://deb.debian.org/debian sid/main amd64 r-cran-tikzdevice amd64 0.12.6-1 [1070 kB] Get:3862 http://deb.debian.org/debian sid/main amd64 r-cran-tinytest all 1.4.1-1 [677 kB] Get:3863 http://deb.debian.org/debian sid/main amd64 r-cran-treespace amd64 1.1.4.3+dfsg-1 [1143 kB] Get:3864 http://deb.debian.org/debian sid/main amd64 r-cran-truncdist all 1.0-2-4 [34.4 kB] Get:3865 http://deb.debian.org/debian sid/main amd64 r-cran-tsne all 0.1-3.1-1 [23.1 kB] Get:3866 http://deb.debian.org/debian sid/main amd64 r-cran-tufte all 0.13-1 [203 kB] Get:3867 http://deb.debian.org/debian sid/main amd64 r-cran-unitizer all 1.4.22-1 [1530 kB] Get:3868 http://deb.debian.org/debian sid/main amd64 r-cran-vcd all 1:1.4-13-1 [1287 kB] Get:3869 http://deb.debian.org/debian sid/main amd64 r-cran-webmockr all 2.0.0-1 [747 kB] Get:3870 http://deb.debian.org/debian sid/main amd64 r-cran-vcr all 1.6.0+dfsg-1 [1030 kB] Get:3871 http://deb.debian.org/debian sid/main amd64 r-cran-vdiffr amd64 1.0.8-1 [140 kB] Get:3872 http://deb.debian.org/debian sid/main amd64 r-cran-venndiagram all 1.7.3-1 [266 kB] Get:3873 http://deb.debian.org/debian sid/main amd64 r-cran-vioplot all 0.5.1-1 [706 kB] Get:3874 http://deb.debian.org/debian sid/main amd64 r-cran-webfakes amd64 1.3.2-1 [469 kB] Get:3875 http://deb.debian.org/debian sid/main amd64 r-cran-webgestaltr amd64 0.4.6-1 [470 kB] Get:3876 http://deb.debian.org/debian sid/main amd64 r-cran-wgcna amd64 1.73-1 [2979 kB] Get:3877 http://deb.debian.org/debian sid/main amd64 r-cran-whoami all 1.3.0-2 [32.2 kB] Get:3878 http://deb.debian.org/debian sid/main amd64 r-cran-xslt amd64 1.5.1-1 [48.4 kB] Get:3879 http://deb.debian.org/debian sid/main amd64 r-cran-zeallot all 0.1.0-3 [59.9 kB] Get:3880 http://deb.debian.org/debian sid/main amd64 r-doc-html all 4.4.3-1 [584 kB] Get:3881 http://deb.debian.org/debian sid/main amd64 r-other-ascat all 3.2.0-1 [333 kB] Get:3882 http://deb.debian.org/debian sid/main amd64 r-other-mott-happy.hbrem amd64 2.4-5 [216 kB] Get:3883 http://deb.debian.org/debian sid/main amd64 r-other-rajewsky-dropbead all 0.3.1+git20180221.d746c6f+ds-3 [252 kB] Get:3884 http://deb.debian.org/debian sid/main amd64 ragout amd64 2.3-5 [2123 kB] Get:3885 http://deb.debian.org/debian sid/main amd64 rambo-k all 1.21+dfsg-5 [1169 kB] Get:3886 http://deb.debian.org/debian sid/main amd64 rampler amd64 2.1.1-1 [21.2 kB] Get:3887 http://deb.debian.org/debian sid/main amd64 rapmap amd64 0.15.0+dfsg-4+b2 [886 kB] Get:3888 http://deb.debian.org/debian sid/main amd64 rasmol amd64 2.7.6.0-3+b1 [810 kB] Get:3889 http://deb.debian.org/debian sid/main amd64 raster3d amd64 3.0-7-2+b2 [1289 kB] Get:3890 http://deb.debian.org/debian sid/main amd64 rate4site amd64 3.0.0-8 [626 kB] Get:3891 http://deb.debian.org/debian sid/main amd64 ray amd64 2.3.1-9 [885 kB] Get:3892 http://deb.debian.org/debian sid/main amd64 rdp-readseq all 2.0.2-9 [456 kB] Get:3893 http://deb.debian.org/debian sid/main amd64 rdp-alignment all 1.2.0-8 [81.7 kB] Get:3894 http://deb.debian.org/debian sid/main amd64 rdp-classifier all 2.10.2-7 [230 kB] Get:3895 http://deb.debian.org/debian sid/main amd64 rdp-classifier-doc all 2.10.2-7 [291 kB] Get:3896 http://deb.debian.org/debian sid/main amd64 readseq amd64 1-15 [54.8 kB] Get:3897 http://deb.debian.org/debian sid/main amd64 readucks all 0.0.3-6 [20.6 kB] Get:3898 http://deb.debian.org/debian sid/main amd64 snpomatic amd64 1.0-7 [85.6 kB] Get:3899 http://deb.debian.org/debian sid/main amd64 reapr amd64 1.0.18+dfsg-7 [215 kB] Get:3900 http://deb.debian.org/debian sid/main amd64 recan all 0.5+dfsg-1 [17.5 kB] Get:3901 http://deb.debian.org/debian sid/main amd64 relion amd64 3.1.3-4+b1 [15.6 MB] Get:3902 http://deb.debian.org/debian sid/main amd64 relion-gui amd64 3.1.3-4+b1 [1161 kB] Get:3903 http://deb.debian.org/debian sid/main amd64 repeatmasker-recon amd64 1.08-8 [85.1 kB] Get:3904 http://deb.debian.org/debian sid/main amd64 reprof all 1.0.1-9 [14.3 kB] Get:3905 http://deb.debian.org/debian sid/main amd64 resfinder-db all 0.0+git20220524.fa32d9a-1 [9079 kB] Get:3906 http://deb.debian.org/debian sid/main amd64 resfinder all 4.4.2-2 [68.0 kB] Get:3907 http://deb.debian.org/debian sid/main amd64 rnahybrid amd64 2.1.2-8 [161 kB] Get:3908 http://deb.debian.org/debian sid/main amd64 roary all 3.13.0+dfsg-2 [185 kB] Get:3909 http://deb.debian.org/debian sid/main amd64 rockhopper all 2.0.3+dfsg2-5 [600 kB] Get:3910 http://deb.debian.org/debian sid/main amd64 roguenarok amd64 1.0.1-3 [202 kB] Get:3911 http://deb.debian.org/debian sid/main amd64 rsem amd64 1.3.3+dfsg-3+b1 [36.1 MB] Get:3912 http://deb.debian.org/debian sid/main amd64 rtax all 0.984-8 [26.7 kB] Get:3913 http://deb.debian.org/debian sid/main amd64 ruby-sdbm amd64 1.0.0-5+b7 [15.1 kB] Get:3914 http://deb.debian.org/debian sid/main amd64 runcircos-gui amd64 0.0+git20200528.82dda8c-1+b1 [1315 kB] Get:3915 http://deb.debian.org/debian sid/main amd64 saint amd64 2.5.0+dfsg-4+b3 [95.6 kB] Get:3916 http://deb.debian.org/debian sid/main amd64 salmid all 0.1.23-5 [1338 kB] Get:3917 http://deb.debian.org/debian sid/main amd64 sambamba amd64 1.0.1+dfsg-2 [607 kB] Get:3918 http://deb.debian.org/debian sid/main amd64 samclip all 0.4.0-4 [20.1 kB] Get:3919 http://deb.debian.org/debian sid/main amd64 savvy-util amd64 2.1.0-3 [240 kB] Get:3920 http://deb.debian.org/debian sid/main amd64 scoary all 1.6.16-10 [235 kB] Get:3921 http://deb.debian.org/debian sid/main amd64 scrappie amd64 1.4.2-8+b7 [73.8 MB] Get:3922 http://deb.debian.org/debian sid/main amd64 scrm amd64 1.7.4-2 [68.1 kB] Get:3923 http://deb.debian.org/debian sid/main amd64 scythe amd64 0.994+git20141017.20d3cff-5 [18.2 kB] Get:3924 http://deb.debian.org/debian sid/main amd64 seaview amd64 1:5.0.5-2+b1 [396 kB] Get:3925 http://deb.debian.org/debian sid/main amd64 seer amd64 1.1.4-8+b1 [1228 kB] Get:3926 http://deb.debian.org/debian sid/main amd64 segemehl amd64 0.3.4-5+b1 [310 kB] Get:3927 http://deb.debian.org/debian sid/main amd64 sepp amd64 4.5.5+dfsg-1 [166 kB] Get:3928 http://deb.debian.org/debian sid/main amd64 seqan-needle amd64 1.0.3+ds-1 [358 kB] Get:3929 http://deb.debian.org/debian sid/main amd64 seqan-raptor amd64 3.0.1+ds-9 [695 kB] Get:3930 http://deb.debian.org/debian sid/main amd64 seqkit amd64 2.9.0+ds-1+b1 [7213 kB] Get:3931 http://deb.debian.org/debian sid/main amd64 seqprep amd64 1.3.2-9 [28.2 kB] Get:3932 http://deb.debian.org/debian sid/main amd64 sra-toolkit amd64 3.0.9+dfsg-7.1 [6520 kB] Get:3933 http://deb.debian.org/debian sid/main amd64 seqsero amd64 1.0.1+dfsg-6 [358 kB] Get:3934 http://deb.debian.org/debian sid/main amd64 sga amd64 0.10.15-7+b1 [832 kB] Get:3935 http://deb.debian.org/debian sid/main amd64 shasta amd64 0.12.0-1+b2 [625 kB] Get:3936 http://deb.debian.org/debian sid/main amd64 spades amd64 4.0.0+dfsg1-2 [8071 kB] Get:3937 http://deb.debian.org/debian sid/main amd64 velvet amd64 1.2.10+dfsg1-9 [678 kB] Get:3938 http://deb.debian.org/debian sid/main amd64 skesa amd64 2.4.0-6+b2 [571 kB] Get:3939 http://deb.debian.org/debian sid/main amd64 trimmomatic all 0.39+dfsg-2 [758 kB] Get:3940 http://deb.debian.org/debian sid/main amd64 shovill amd64 1.1.0-9 [13.5 kB] Get:3941 http://deb.debian.org/debian sid/main amd64 sibelia amd64 3.0.7+dfsg-3 [317 kB] Get:3942 http://deb.debian.org/debian sid/main amd64 sibsim4 amd64 0.20-5 [30.4 kB] Get:3943 http://deb.debian.org/debian sid/main amd64 sickle amd64 1.33+git20150314.f3d6ae3-2 [18.4 kB] Get:3944 http://deb.debian.org/debian sid/main amd64 sigma-align amd64 1.1.3-9 [23.6 kB] Get:3945 http://deb.debian.org/debian sid/main amd64 sim4 amd64 0.0.20121010-8 [359 kB] Get:3946 http://deb.debian.org/debian sid/main amd64 simka amd64 1.5.3-8+b3 [436 kB] Get:3947 http://deb.debian.org/debian sid/main amd64 simkamin all 1.5.3-8 [32.3 kB] Get:3948 http://deb.debian.org/debian sid/main amd64 ska amd64 1.0+dfsg-4 [147 kB] Get:3949 http://deb.debian.org/debian sid/main amd64 skewer amd64 0.2.2-6+b1 [88.5 kB] Get:3950 http://deb.debian.org/debian sid/main amd64 smithwaterman amd64 0.0+git20160702.2610e25-12+b2 [13.4 kB] Get:3951 http://deb.debian.org/debian sid/main amd64 smrtanalysis all 0~20210112 [3136 B] Get:3952 http://deb.debian.org/debian sid/main amd64 snap amd64 2013-11-29-11 [380 kB] Get:3953 http://deb.debian.org/debian sid/main amd64 snap-aligner amd64 2.0.3+dfsg-2 [834 kB] Get:3954 http://deb.debian.org/debian sid/main amd64 sniffles all 2.6.0-1 [57.7 kB] Get:3955 http://deb.debian.org/debian sid/main amd64 snp-sites amd64 2.5.1-2+b2 [13.9 kB] Get:3956 http://deb.debian.org/debian sid/main amd64 snpeff all 5.2.f+dfsg-1 [7244 B] Get:3957 http://deb.debian.org/debian sid/main amd64 vt amd64 0.57721+ds-3+b1 [841 kB] Get:3958 http://deb.debian.org/debian sid/main amd64 snippy all 4.6.0+dfsg-5 [26.9 kB] Get:3959 http://deb.debian.org/debian sid/main amd64 snpsift all 5.2.e+dfsg-2 [4704 B] Get:3960 http://deb.debian.org/debian sid/main amd64 soapaligner amd64 2.20-5 [51.2 kB] Get:3961 http://deb.debian.org/debian sid/main amd64 soapdenovo amd64 1.05-6 [938 kB] Get:3962 http://deb.debian.org/debian sid/main amd64 soapdenovo2 amd64 242+dfsg-4 [927 kB] Get:3963 http://deb.debian.org/debian sid/main amd64 soapsnp amd64 1.03-5 [49.8 kB] Get:3964 http://deb.debian.org/debian sid/main amd64 sortmerna amd64 4.3.7-2+b2 [585 kB] Get:3965 http://deb.debian.org/debian sid/main amd64 spaced amd64 1.2.0-201605+dfsg-4 [60.8 kB] Get:3966 http://deb.debian.org/debian sid/main amd64 spaln-data all 3.0.2+dfsg-2 [19.5 MB] Get:3967 http://deb.debian.org/debian sid/main amd64 spaln amd64 3.0.2+dfsg-2+b1 [582 kB] Get:3968 http://deb.debian.org/debian sid/main amd64 spoa amd64 4.1.4-2+b1 [38.3 kB] Get:3969 http://deb.debian.org/debian sid/main amd64 sprai amd64 0.9.9.23+dfsg1-3 [1513 kB] Get:3970 http://deb.debian.org/debian sid/main amd64 spread-phy all 1.0.7+dfsg-5 [3365 kB] Get:3971 http://deb.debian.org/debian sid/main amd64 sq amd64 1.2.0-1+b1 [5620 kB] Get:3972 http://deb.debian.org/debian sid/main amd64 srst2 amd64 0.2.0-13 [61.3 kB] Get:3973 http://deb.debian.org/debian sid/main amd64 ssake all 4.0.1-2 [48.8 kB] Get:3974 http://deb.debian.org/debian sid/main amd64 ssl-cert all 1.1.3 [16.8 kB] Get:3975 http://deb.debian.org/debian sid/main amd64 sspace all 2.1.1+dfsg-7 [1237 kB] Get:3976 http://deb.debian.org/debian sid/main amd64 ssw-align amd64 1.1-15+b2 [22.9 kB] Get:3977 http://deb.debian.org/debian sid/main amd64 stacks amd64 2.68+dfsg-2 [1261 kB] Get:3978 http://deb.debian.org/debian sid/main amd64 tk8.6 amd64 8.6.16-1 [69.6 kB] Get:3979 http://deb.debian.org/debian sid/main amd64 tk amd64 8.6.16 [4136 B] Get:3980 http://deb.debian.org/debian sid/main amd64 staden-common all 2.0.0+b11-5 [1971 kB] Get:3981 http://deb.debian.org/debian sid/main amd64 staden-io-lib-utils amd64 1.15.0-1.1+b2 [170 kB] Get:3982 http://deb.debian.org/debian sid/main amd64 tklib all 0.9-1 [1749 kB] Get:3983 http://deb.debian.org/debian sid/main amd64 staden amd64 2.0.0+b11-5 [1645 kB] Get:3984 http://deb.debian.org/debian sid/main amd64 stringtie amd64 2.2.1+ds-3+b1 [414 kB] Get:3985 http://deb.debian.org/debian sid/main amd64 subread amd64 2.0.8+dfsg-1 [811 kB] Get:3986 http://deb.debian.org/debian sid/main amd64 suitename amd64 0.4.130509+git20210223.ebb1325-1 [23.9 kB] Get:3987 http://deb.debian.org/debian sid/main amd64 sumaclust amd64 1.0.36+ds-4 [103 kB] Get:3988 http://deb.debian.org/debian sid/main amd64 sumatra amd64 1.0.36+ds-2 [80.4 kB] Get:3989 http://deb.debian.org/debian sid/main amd64 sumtrees all 4.6.1-2 [185 kB] Get:3990 http://deb.debian.org/debian sid/main amd64 surankco all 0.0.r5+dfsg-4 [79.4 kB] Get:3991 http://deb.debian.org/debian sid/main amd64 survivor amd64 1.0.7-4 [305 kB] Get:3992 http://deb.debian.org/debian sid/main amd64 surpyvor all 0.5-2 [9776 B] Get:3993 http://deb.debian.org/debian sid/main amd64 svim all 2.0.0-3 [34.4 kB] Get:3994 http://deb.debian.org/debian sid/main amd64 swarm amd64 3.1.5+dfsg-2 [646 kB] Get:3995 http://deb.debian.org/debian sid/main amd64 sweed amd64 3.2.1+dfsg-6 [66.2 kB] Get:3996 http://deb.debian.org/debian sid/main amd64 systemd-cryptsetup amd64 257.4-3 [170 kB] Get:3997 http://deb.debian.org/debian sid/main amd64 t-coffee amd64 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 [1032 kB] Get:3998 http://deb.debian.org/debian sid/main amd64 tantan amd64 51-1 [42.3 kB] Get:3999 http://deb.debian.org/debian sid/main amd64 tcllib all 2.0+dfsg-2 [4616 kB] Get:4000 http://deb.debian.org/debian sid/main amd64 teckit amd64 2.5.12+ds1-1+b1 [714 kB] Get:4001 http://deb.debian.org/debian sid/main amd64 terraphast amd64 0.0+git20200413.8af2e4c+dfsg-3 [54.2 kB] Get:4002 http://deb.debian.org/debian sid/main amd64 tex-gyre all 20180621-6 [6209 kB] Get:4003 http://deb.debian.org/debian sid/main amd64 texlive-fonts-recommended all 2024.20250309-1 [4989 kB] Get:4004 http://deb.debian.org/debian sid/main amd64 texlive-lang-greek all 2024.20250309-1 [79.2 MB] Get:4005 http://deb.debian.org/debian sid/main amd64 texlive-latex-recommended all 2024.20250309-1 [8745 kB] Get:4006 http://deb.debian.org/debian sid/main amd64 texlive-pictures all 2024.20250309-1 [17.0 MB] Get:4007 http://deb.debian.org/debian sid/main amd64 texlive-latex-extra all 2024.20250309-2 [25.2 MB] Get:4008 http://deb.debian.org/debian sid/main amd64 texlive-plain-generic all 2024.20250309-2 [29.0 MB] Get:4009 http://deb.debian.org/debian sid/main amd64 texlive-science all 2024.20250309-2 [3937 kB] Get:4010 http://deb.debian.org/debian sid/main amd64 tipa all 2:1.3-21 [2974 kB] Get:4011 http://deb.debian.org/debian sid/main amd64 texlive-xetex all 2024.20250309-1 [11.3 MB] Get:4012 http://deb.debian.org/debian sid/main amd64 theseus amd64 3.3.0-14+b1 [386 kB] Get:4013 http://deb.debian.org/debian sid/main amd64 thesias amd64 3.1.1-3 [180 kB] Get:4014 http://deb.debian.org/debian sid/main amd64 tiddit amd64 3.6.1+dfsg-2+b1 [330 kB] Get:4015 http://deb.debian.org/debian sid/main amd64 tigr-glimmer amd64 3.02b-6+b1 [283 kB] Get:4016 http://deb.debian.org/debian sid/main amd64 tipp amd64 1.0+dfsg-3 [131 kB] Get:4017 http://deb.debian.org/debian sid/main amd64 tm-align amd64 20190822+dfsg-3 [867 kB] Get:4018 http://deb.debian.org/debian sid/main amd64 tnseq-transit amd64 3.3.12-1 [17.6 MB] Get:4019 http://deb.debian.org/debian sid/main amd64 toil all 8.0.0-3 [999 kB] Get:4020 http://deb.debian.org/debian sid/main amd64 tombo amd64 1.5.1-7+b2 [450 kB] Get:4021 http://deb.debian.org/debian sid/main amd64 tophat-recondition all 1.4-3 [11.1 kB] Get:4022 http://deb.debian.org/debian sid/main amd64 toppred amd64 1.10-10 [44.4 kB] Get:4023 http://deb.debian.org/debian sid/main amd64 tortoize amd64 2.0.13-1 [854 kB] Get:4024 http://deb.debian.org/debian sid/main amd64 trace2dbest all 3.0.1-2 [29.9 kB] Get:4025 http://deb.debian.org/debian sid/main amd64 tracetuner amd64 3.0.6~beta+dfsg-3 [344 kB] Get:4026 http://deb.debian.org/debian sid/main amd64 transdecoder all 5.7.1-2 [205 kB] Get:4027 http://deb.debian.org/debian sid/main amd64 transrate-tools amd64 1.0.0-5 [279 kB] Get:4028 http://deb.debian.org/debian sid/main amd64 transtermhp amd64 2.09-5 [131 kB] Get:4029 http://deb.debian.org/debian sid/main amd64 tree-puzzle amd64 5.3~rc16+dfsg-12+b1 [171 kB] Get:4030 http://deb.debian.org/debian sid/main amd64 tree-puzzle-doc all 5.3~rc16+dfsg-12 [421 kB] Get:4031 http://deb.debian.org/debian sid/main amd64 treeview all 1.2.0+dfsg-2 [2755 kB] Get:4032 http://deb.debian.org/debian sid/main amd64 treeviewx amd64 0.5.1+git20100823.7e4d0e9-4+b4 [196 kB] Get:4033 http://deb.debian.org/debian sid/main amd64 trf amd64 4.09.1-6 [58.2 kB] Get:4034 http://deb.debian.org/debian sid/main amd64 trinityrnaseq amd64 2.15.2+dfsg-1 [1738 kB] Get:4035 http://deb.debian.org/debian sid/main amd64 trinityrnaseq-examples amd64 2.15.2+dfsg-1 [300 MB] Get:4036 http://deb.debian.org/debian sid/main amd64 tvc amd64 5.0.3+git20151221.80e144e+dfsg-5+b3 [1115 kB] Get:4037 http://deb.debian.org/debian sid/main amd64 twopaco amd64 1.0.0+dfsg-1 [388 kB] Get:4038 http://deb.debian.org/debian sid/main amd64 uc-echo amd64 1.12-19 [78.8 kB] Get:4039 http://deb.debian.org/debian sid/main amd64 ugene-data all 51.0+dfsg-3 [7638 kB] Get:4040 http://deb.debian.org/debian sid/main amd64 ugene amd64 51.0+dfsg-3 [23.0 MB] Get:4041 http://deb.debian.org/debian sid/main amd64 umis amd64 1.0.9-2+b1 [32.2 kB] Get:4042 http://deb.debian.org/debian sid/main amd64 uncalled amd64 2.3+ds-3+b3 [654 kB] Get:4043 http://deb.debian.org/debian sid/main amd64 unicycler amd64 0.5.1+dfsg-3 [899 kB] Get:4044 http://deb.debian.org/debian sid/main amd64 unicycler-data all 0.5.1+dfsg-3 [12.0 MB] Get:4045 http://deb.debian.org/debian sid/main amd64 unikmer amd64 0.20.0-1+b6 [3189 kB] Get:4046 http://deb.debian.org/debian sid/main amd64 usb-modeswitch-data all 20191128-7 [37.3 kB] Get:4047 http://deb.debian.org/debian sid/main amd64 usb-modeswitch amd64 2.6.1-4+b2 [51.0 kB] Get:4048 http://deb.debian.org/debian sid/main amd64 va-driver-all amd64 2.22.0-3 [14.9 kB] Get:4049 http://deb.debian.org/debian sid/main amd64 vcfanno amd64 0.3.5+ds-2+b6 [2684 kB] Get:4050 http://deb.debian.org/debian sid/main amd64 vdpau-driver-all amd64 1.5-3+b1 [4704 B] Get:4051 http://deb.debian.org/debian sid/main amd64 velvetoptimiser all 2.2.6-5 [26.7 kB] Get:4052 http://deb.debian.org/debian sid/main amd64 veryfasttree amd64 4.0.4+dfsg-1 [2343 kB] Get:4053 http://deb.debian.org/debian sid/main amd64 vg amd64 1.59.0+ds-0.1 [57.6 MB] Get:4054 http://deb.debian.org/debian sid/main amd64 vim-addon-manager all 0.5.11 [17.5 kB] Get:4055 http://deb.debian.org/debian sid/main amd64 virulencefinder all 2.0.5-2 [13.5 kB] Get:4056 http://deb.debian.org/debian sid/main amd64 vmatch amd64 2.3.1+dfsg-9 [436 kB] Get:4057 http://deb.debian.org/debian sid/main amd64 wham-align amd64 0.1.5-8 [156 kB] Get:4058 http://deb.debian.org/debian sid/main amd64 wise-data all 2.4.1-25 [76.1 kB] Get:4059 http://deb.debian.org/debian sid/main amd64 wise amd64 2.4.1-25 [1037 kB] Get:4060 http://deb.debian.org/debian sid/main amd64 wpasupplicant amd64 2:2.10-22 [1426 kB] Get:4061 http://deb.debian.org/debian sid/main amd64 x11-xserver-utils amd64 7.7+11 [163 kB] Get:4062 http://deb.debian.org/debian sid/main amd64 xdg-desktop-portal amd64 1.20.0+ds-1+b1 [402 kB] Get:4063 http://deb.debian.org/debian sid/main amd64 xdg-desktop-portal-gtk amd64 1.15.2-2 [128 kB] Get:4064 http://deb.debian.org/debian sid/main amd64 xdg-user-dirs amd64 0.18-2 [53.2 kB] Get:4065 http://deb.debian.org/debian sid/main amd64 xpore all 2.1-2 [34.7 kB] Get:4066 http://deb.debian.org/debian sid/main amd64 xsltproc amd64 1.1.35-1.2 [115 kB] Get:4067 http://deb.debian.org/debian sid/main amd64 xxd amd64 2:9.1.1113-1 [98.6 kB] Get:4068 http://deb.debian.org/debian sid/main amd64 yaha amd64 0.1.83-3 [44.0 kB] Get:4069 http://deb.debian.org/debian sid/main amd64 yanagiba all 1.0.0-5 [25.6 kB] Get:4070 http://deb.debian.org/debian sid/main amd64 yanosim amd64 0.1-6 [9764 B] Get:4071 http://deb.debian.org/debian sid/main amd64 yelp-xsl all 42.1-3 [467 kB] Get:4072 http://deb.debian.org/debian sid/main amd64 yelp amd64 42.2-2 [777 kB] Get:4073 http://deb.debian.org/debian sid/main amd64 zenity-common all 4.1.90-1 [2493 kB] Get:4074 http://deb.debian.org/debian sid/main amd64 zenity amd64 4.1.90-1 [73.9 kB] Get:4075 http://deb.debian.org/debian sid/main amd64 zutty amd64 0.16.2.20241020+dfsg1-1 [182 kB] Get:4076 http://deb.debian.org/debian sid/main amd64 gnupg-utils amd64 2.2.46-5 [509 kB] Preconfiguring packages ... Fetched 5418 MB in 4min 27s (20.3 MB/s) Selecting previously unselected package libsystemd-shared:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4910 files and directories currently installed.) Preparing to unpack .../libsystemd-shared_257.4-3_amd64.deb ... Unpacking libsystemd-shared:amd64 (257.4-3) ... Selecting previously unselected package libapparmor1:amd64. Preparing to unpack .../libapparmor1_4.1.0~beta5-5_amd64.deb ... 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Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' → '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' → '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' → '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. [ESC][0;1;39m/usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring.[ESC][0m [ESC][0;1;31m"/home" already exists and is not a directory.[ESC][0m Selecting previously unselected package systemd-sysv. (Reading database ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.6+ds-1) ... Selecting previously unselected package libxtables12:amd64. Preparing to unpack .../0008-libxtables12_1.8.11-2_amd64.deb ... Unpacking libxtables12:amd64 (1.8.11-2) ... Selecting previously unselected package libcap2-bin. Preparing to unpack .../0009-libcap2-bin_1%3a2.75-3_amd64.deb ... Unpacking libcap2-bin (1:2.75-3) ... Selecting previously unselected package iproute2. Preparing to unpack .../0010-iproute2_6.13.0-1_amd64.deb ... Unpacking iproute2 (6.13.0-1) ... Selecting previously unselected package less. Preparing to unpack .../0011-less_643-1_amd64.deb ... Unpacking less (643-1) ... Selecting previously unselected package linux-sysctl-defaults. 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Adding 'diversion of /usr/bin/podselect to /usr/bin/podselect.bundled by libpod-parser-perl' Adding 'diversion of /usr/share/man/man1/podselect.1.gz to /usr/share/man/man1/podselect.bundled.1.gz by libpod-parser-perl' Unpacking libpod-parser-perl (1.67-1) ... Selecting previously unselected package libgetopt-euclid-perl. Preparing to unpack .../1488-libgetopt-euclid-perl_0.4.8-1_all.deb ... Unpacking libgetopt-euclid-perl (0.4.8-1) ... Selecting previously unselected package libmath-random-mt-perl. Preparing to unpack .../1489-libmath-random-mt-perl_1.17-2+b4_amd64.deb ... Unpacking libmath-random-mt-perl (1.17-2+b4) ... Selecting previously unselected package grinder. Preparing to unpack .../1490-grinder_0.5.4-6_all.deb ... Unpacking grinder (0.5.4-6) ... Selecting previously unselected package gromacs-data. Preparing to unpack .../1491-gromacs-data_2025.1-1_all.deb ... Unpacking gromacs-data (2025.1-1) ... Selecting previously unselected package libmuparser2v5:amd64. 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Unpacking python3-astropy (7.0.1-2+b1) ... Selecting previously unselected package python3-multipletau. Preparing to unpack .../2774-python3-multipletau_0.4.1+ds-1_all.deb ... Unpacking python3-multipletau (0.4.1+ds-1) ... Selecting previously unselected package python3-tifffile. Preparing to unpack .../2775-python3-tifffile_20250313-1_all.deb ... Unpacking python3-tifffile (20250313-1) ... Selecting previously unselected package pyscanfcs. Preparing to unpack .../2776-pyscanfcs_0.3.6+ds-5_amd64.deb ... Unpacking pyscanfcs (0.3.6+ds-5) ... Selecting previously unselected package python-biopython-doc. Preparing to unpack .../2777-python-biopython-doc_1.85+dfsg-2_all.deb ... Unpacking python-biopython-doc (1.85+dfsg-2) ... Selecting previously unselected package python-odf-doc. Preparing to unpack .../2778-python-odf-doc_1.4.2-4_all.deb ... Unpacking python-odf-doc (1.4.2-4) ... Selecting previously unselected package python3-odf. 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Unpacking python3-pyu2f (0.1.5-4) ... Selecting previously unselected package python3-responses. Preparing to unpack .../2888-python3-responses_0.25.6-1_all.deb ... Unpacking python3-responses (0.25.6-1) ... Selecting previously unselected package python3-rsa. Preparing to unpack .../2889-python3-rsa_4.9-2_all.deb ... Unpacking python3-rsa (4.9-2) ... Selecting previously unselected package python3-google-auth. Preparing to unpack .../2890-python3-google-auth_2.28.2-3_all.deb ... Unpacking python3-google-auth (2.28.2-3) ... Selecting previously unselected package python3-gridfs. Preparing to unpack .../2891-python3-gridfs_4.10.1-5_all.deb ... Unpacking python3-gridfs (4.10.1-5) ... Selecting previously unselected package python3-h11. Preparing to unpack .../2892-python3-h11_0.14.0-1_all.deb ... Unpacking python3-h11 (0.14.0-1) ... Selecting previously unselected package python3-hpack. Preparing to unpack .../2893-python3-hpack_4.0.0-2_all.deb ... Unpacking python3-hpack (4.0.0-2) ... 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Unpacking python3-orjson (3.10.7-2+b1) ... Selecting previously unselected package python3-standard-pipes. Preparing to unpack .../2917-python3-standard-pipes_3.13.0-5_all.deb ... Unpacking python3-standard-pipes (3.13.0-5) ... Selecting previously unselected package python3-pairtools. Preparing to unpack .../2918-python3-pairtools_1.1.3-1+b1_amd64.deb ... Unpacking python3-pairtools (1.1.3-1+b1) ... Selecting previously unselected package python3-paramiko. Preparing to unpack .../2919-python3-paramiko_3.5.1-2_all.deb ... Unpacking python3-paramiko (3.5.1-2) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../2920-python3-wheel_0.45.1-1_all.deb ... Unpacking python3-wheel (0.45.1-1) ... Selecting previously unselected package python3-parasail. Preparing to unpack .../2921-python3-parasail_1.3.3-1_all.deb ... Unpacking python3-parasail (1.3.3-1) ... Selecting previously unselected package python3-tblib. 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Unpacking python3-rfc3987 (1.3.8-3) ... Selecting previously unselected package python3-ruffus. Preparing to unpack .../2934-python3-ruffus_2.8.4-7_all.deb ... Unpacking python3-ruffus (2.8.4-7) ... Selecting previously unselected package python3-shasta. Preparing to unpack .../2935-python3-shasta_0.12.0-1+b2_amd64.deb ... Unpacking python3-shasta (0.12.0-1+b2) ... Selecting previously unselected package python3-sklearn-pandas. Preparing to unpack .../2936-python3-sklearn-pandas_2.2.0-4_all.deb ... Unpacking python3-sklearn-pandas (2.2.0-4) ... Selecting previously unselected package python3-sqlalchemy-ext:amd64. Preparing to unpack .../2937-python3-sqlalchemy-ext_2.0.32+ds1-1+b2_amd64.deb ... Unpacking python3-sqlalchemy-ext:amd64 (2.0.32+ds1-1+b2) ... Selecting previously unselected package python3-sqt. Preparing to unpack .../2938-python3-sqt_0.8.0-9_amd64.deb ... Unpacking python3-sqt (0.8.0-9) ... Selecting previously unselected package python3-tables-lib. 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Selecting previously unselected package q2-quality-filter. Preparing to unpack .../2957-q2-quality-filter_2024.5.0-1_all.deb ... Unpacking q2-quality-filter (2024.5.0-1) ... Selecting previously unselected package q2-metadata. Preparing to unpack .../2958-q2-metadata_2024.5.0+dfsg-1_amd64.deb ... Unpacking q2-metadata (2024.5.0+dfsg-1) ... Selecting previously unselected package qcat. Preparing to unpack .../2959-qcat_1.1.0-7_all.deb ... Unpacking qcat (1.1.0-7) ... Selecting previously unselected package r-bioc-savr. Preparing to unpack .../2960-r-bioc-savr_1.37.0-6_all.deb ... Unpacking r-bioc-savr (1.37.0-6) ... Selecting previously unselected package qcumber. Preparing to unpack .../2961-qcumber_2.3.0-2_all.deb ... Unpacking qcumber (2.3.0-2) ... Selecting previously unselected package qt5-gtk-platformtheme:amd64. Preparing to unpack .../2962-qt5-gtk-platformtheme_5.15.15+dfsg-4+b1_amd64.deb ... Unpacking qt5-gtk-platformtheme:amd64 (5.15.15+dfsg-4+b1) ... 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Selecting previously unselected package r-cran-bayesfactor. Preparing to unpack .../3186-r-cran-bayesfactor_0.9.12-4.7+dfsg-1_amd64.deb ... Unpacking r-cran-bayesfactor (0.9.12-4.7+dfsg-1) ... Selecting previously unselected package r-cran-bayesfm. Preparing to unpack .../3187-r-cran-bayesfm_0.1.7-1_amd64.deb ... Unpacking r-cran-bayesfm (0.1.7-1) ... Selecting previously unselected package r-cran-ggridges. Preparing to unpack .../3188-r-cran-ggridges_0.5.6-1_all.deb ... Unpacking r-cran-ggridges (0.5.6-1) ... Selecting previously unselected package r-cran-tensora. Preparing to unpack .../3189-r-cran-tensora_0.36.2.1-1_amd64.deb ... Unpacking r-cran-tensora (0.36.2.1-1) ... Selecting previously unselected package r-cran-distributional. Preparing to unpack .../3190-r-cran-distributional_0.5.0-1_all.deb ... Unpacking r-cran-distributional (0.5.0-1) ... Selecting previously unselected package r-cran-posterior. Preparing to unpack .../3191-r-cran-posterior_1.6.1+dfsg-1_all.deb ... Unpacking r-cran-posterior (1.6.1+dfsg-1) ... Selecting previously unselected package r-cran-bayesplot. Preparing to unpack .../3192-r-cran-bayesplot_1.11.1-1_all.deb ... Unpacking r-cran-bayesplot (1.11.1-1) ... Selecting previously unselected package r-cran-insight. Preparing to unpack .../3193-r-cran-insight_1.1.0+dfsg-1_all.deb ... Unpacking r-cran-insight (1.1.0+dfsg-1) ... Selecting previously unselected package r-cran-datawizard. Preparing to unpack .../3194-r-cran-datawizard_1.0.1+dfsg-1_all.deb ... Unpacking r-cran-datawizard (1.0.1+dfsg-1) ... Selecting previously unselected package r-cran-bayestestr. Preparing to unpack .../3195-r-cran-bayestestr_0.15.2-1_all.deb ... Unpacking r-cran-bayestestr (0.15.2-1) ... Selecting previously unselected package r-cran-bdsmatrix. Preparing to unpack .../3196-r-cran-bdsmatrix_1.3-7-1_amd64.deb ... Unpacking r-cran-bdsmatrix (1.3-7-1) ... Selecting previously unselected package r-cran-bbmle. 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Unpacking r-cran-conflicted (1.2.0-1.1) ... Selecting previously unselected package r-cran-rex. Preparing to unpack .../3239-r-cran-rex_1.2.1-1_all.deb ... Unpacking r-cran-rex (1.2.1-1) ... Selecting previously unselected package r-cran-covr. Preparing to unpack .../3240-r-cran-covr_3.6.4+dfsg-1_amd64.deb ... Unpacking r-cran-covr (3.6.4+dfsg-1) ... Selecting previously unselected package r-cran-triebeard. Preparing to unpack .../3241-r-cran-triebeard_0.4.1-1_amd64.deb ... Unpacking r-cran-triebeard (0.4.1-1) ... Selecting previously unselected package r-cran-urltools. Preparing to unpack .../3242-r-cran-urltools_1.7.3+dfsg-2_amd64.deb ... Unpacking r-cran-urltools (1.7.3+dfsg-2) ... Selecting previously unselected package r-cran-httpcode. Preparing to unpack .../3243-r-cran-httpcode_0.3.0-2_all.deb ... Unpacking r-cran-httpcode (0.3.0-2) ... Selecting previously unselected package r-cran-crul. Preparing to unpack .../3244-r-cran-crul_1.5.0+dfsg-1_all.deb ... Unpacking r-cran-crul (1.5.0+dfsg-1) ... Selecting previously unselected package r-cran-cubelyr. Preparing to unpack .../3245-r-cran-cubelyr_1.0.2-1_all.deb ... Unpacking r-cran-cubelyr (1.0.2-1) ... Selecting previously unselected package r-cran-gbutils. Preparing to unpack .../3246-r-cran-gbutils_0.5-3_all.deb ... Unpacking r-cran-gbutils (0.5-3) ... Selecting previously unselected package r-cran-cvar. Preparing to unpack .../3247-r-cran-cvar_0.5-2_all.deb ... Unpacking r-cran-cvar (0.5-2) ... Selecting previously unselected package r-cran-kernlab. Preparing to unpack .../3248-r-cran-kernlab_0.9-33-1_amd64.deb ... Unpacking r-cran-kernlab (0.9-33-1) ... Selecting previously unselected package r-cran-cvst. Preparing to unpack .../3249-r-cran-cvst_0.2-3-1_all.deb ... Unpacking r-cran-cvst (0.2-3-1) ... Selecting previously unselected package r-cran-remotes. Preparing to unpack .../3250-r-cran-remotes_2.5.0+dfsg-1_all.deb ... Unpacking r-cran-remotes (2.5.0+dfsg-1) ... 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Unpacking r-cran-rversions (2.1.2-1) ... Selecting previously unselected package r-cran-urlchecker. Preparing to unpack .../3275-r-cran-urlchecker_1.0.1-2_all.deb ... Unpacking r-cran-urlchecker (1.0.1-2) ... Selecting previously unselected package r-cran-devtools. Preparing to unpack .../3276-r-cran-devtools_2.4.5-1_all.deb ... Unpacking r-cran-devtools (2.4.5-1) ... Selecting previously unselected package r-cran-dfoptim. Preparing to unpack .../3277-r-cran-dfoptim_2023.1.0-1_all.deb ... Unpacking r-cran-dfoptim (2023.1.0-1) ... Selecting previously unselected package r-cran-gap.datasets. Preparing to unpack .../3278-r-cran-gap.datasets_0.0.6-1_all.deb ... Unpacking r-cran-gap.datasets (0.0.6-1) ... Selecting previously unselected package r-cran-gap. Preparing to unpack .../3279-r-cran-gap_1.6+dfsg-1+b1_amd64.deb ... Unpacking r-cran-gap (1.6+dfsg-1+b1) ... Selecting previously unselected package r-cran-qgam. Preparing to unpack .../3280-r-cran-qgam_1.3.4-1+b1_amd64.deb ... Unpacking r-cran-qgam (1.3.4-1+b1) ... Selecting previously unselected package r-cran-dharma. Preparing to unpack .../3281-r-cran-dharma_0.4.7-2_all.deb ... Unpacking r-cran-dharma (0.4.7-2) ... Selecting previously unselected package r-cran-visnetwork. Preparing to unpack .../3282-r-cran-visnetwork_2.1.2+ds-1_all.deb ... Unpacking r-cran-visnetwork (2.1.2+ds-1) ... Selecting previously unselected package r-cran-diagrammer. Preparing to unpack .../3283-r-cran-diagrammer_1.0.11+ds-2_all.deb ... Unpacking r-cran-diagrammer (1.0.11+ds-2) ... Selecting previously unselected package r-cran-dicedesign. Preparing to unpack .../3284-r-cran-dicedesign_1.10-1_amd64.deb ... Unpacking r-cran-dicedesign (1.10-1) ... Selecting previously unselected package r-cran-dials. Preparing to unpack .../3285-r-cran-dials_1.2.1-1_all.deb ... Unpacking r-cran-dials (1.2.1-1) ... Selecting previously unselected package r-cran-drr. Preparing to unpack .../3286-r-cran-drr_0.0.4-2_all.deb ... 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Unpacking r-cran-docopt (0.7.1-2) ... Selecting previously unselected package r-cran-domc. Preparing to unpack .../3293-r-cran-domc_1.3.8-1_all.deb ... Unpacking r-cran-domc (1.3.8-1) ... Selecting previously unselected package r-cran-dorng. Preparing to unpack .../3294-r-cran-dorng_1.8.6.1-1_all.deb ... Unpacking r-cran-dorng (1.8.6.1-1) ... Selecting previously unselected package r-cran-dotcall64. Preparing to unpack .../3295-r-cran-dotcall64_1.2-1_amd64.deb ... Unpacking r-cran-dotcall64 (1.2-1) ... Selecting previously unselected package r-cran-dtplyr. Preparing to unpack .../3296-r-cran-dtplyr_1.3.1-1_all.deb ... Unpacking r-cran-dtplyr (1.3.1-1) ... Selecting previously unselected package r-cran-dygraphs. Preparing to unpack .../3297-r-cran-dygraphs_1.1.1.6+dfsg-4_all.deb ... Unpacking r-cran-dygraphs (1.1.1.6+dfsg-4) ... Selecting previously unselected package r-cran-dynamictreecut. Preparing to unpack .../3298-r-cran-dynamictreecut_1.63-1-3_all.deb ... Unpacking r-cran-dynamictreecut (1.63-1-3) ... Selecting previously unselected package r-cran-dynlm. Preparing to unpack .../3299-r-cran-dynlm_0.3.6-2_all.deb ... Unpacking r-cran-dynlm (0.3.6-2) ... Selecting previously unselected package r-cran-eaf. Preparing to unpack .../3300-r-cran-eaf_2.5.1-1_amd64.deb ... Unpacking r-cran-eaf (2.5.1-1) ... Selecting previously unselected package r-cran-plotrix. Preparing to unpack .../3301-r-cran-plotrix_3.8-4-1_all.deb ... Unpacking r-cran-plotrix (3.8-4-1) ... Selecting previously unselected package r-cran-plotmo. Preparing to unpack .../3302-r-cran-plotmo_3.6.4-1_all.deb ... Unpacking r-cran-plotmo (3.6.4-1) ... Selecting previously unselected package r-cran-earth. Preparing to unpack .../3303-r-cran-earth_5.3.4-1_amd64.deb ... Unpacking r-cran-earth (5.3.4-1) ... Selecting previously unselected package r-cran-mitools. Preparing to unpack .../3304-r-cran-mitools_2.4-2_all.deb ... Unpacking r-cran-mitools (2.4-2) ... 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Unpacking r-cran-effectsize (1.0.0+dfsg-1) ... Selecting previously unselected package r-cran-egg. Preparing to unpack .../3311-r-cran-egg_0.4.5-3_all.deb ... Unpacking r-cran-egg (0.4.5-3) ... Selecting previously unselected package r-cran-ellipse. Preparing to unpack .../3312-r-cran-ellipse_0.5.0-1_all.deb ... Unpacking r-cran-ellipse (0.5.0-1) ... Selecting previously unselected package r-cran-emdbook. Preparing to unpack .../3313-r-cran-emdbook_1.3.13+ds-1_all.deb ... Unpacking r-cran-emdbook (1.3.13+ds-1) ... Selecting previously unselected package r-cran-emmeans. Preparing to unpack .../3314-r-cran-emmeans_1.10.7+dfsg-1_all.deb ... Unpacking r-cran-emmeans (1.10.7+dfsg-1) ... Selecting previously unselected package r-cran-emoa. Preparing to unpack .../3315-r-cran-emoa_0.5-3-1_amd64.deb ... Unpacking r-cran-emoa (0.5-3-1) ... Selecting previously unselected package r-cran-gsl. Preparing to unpack .../3316-r-cran-gsl_2.1-8-1+b1_amd64.deb ... Unpacking r-cran-gsl (2.1-8-1+b1) ... Selecting previously unselected package r-cran-energy. Preparing to unpack .../3317-r-cran-energy_1.7-12-1_amd64.deb ... Unpacking r-cran-energy (1.7-12-1) ... Selecting previously unselected package r-cran-etm. Preparing to unpack .../3318-r-cran-etm_1.1.1-1_amd64.deb ... Unpacking r-cran-etm (1.1.1-1) ... Selecting previously unselected package r-cran-epi. Preparing to unpack .../3319-r-cran-epi_2.59-1_amd64.deb ... Unpacking r-cran-epi (2.59-1) ... Selecting previously unselected package r-cran-pander. Preparing to unpack .../3320-r-cran-pander_0.6.6+dfsg-1_amd64.deb ... Unpacking r-cran-pander (0.6.6+dfsg-1) ... Selecting previously unselected package r-cran-fontbitstreamvera. Preparing to unpack .../3321-r-cran-fontbitstreamvera_0.1.1+dfsg-5_all.deb ... Unpacking r-cran-fontbitstreamvera (0.1.1+dfsg-5) ... Selecting previously unselected package r-cran-fontliberation. Preparing to unpack .../3322-r-cran-fontliberation_0.1.0+dfsg-6_all.deb ... Unpacking r-cran-fontliberation (0.1.0+dfsg-6) ... Selecting previously unselected package r-cran-fontquiver. Preparing to unpack .../3323-r-cran-fontquiver_0.2.1-4_all.deb ... Unpacking r-cran-fontquiver (0.2.1-4) ... Selecting previously unselected package r-cran-gdtools. Preparing to unpack .../3324-r-cran-gdtools_0.4.1-1_amd64.deb ... Unpacking r-cran-gdtools (0.4.1-1) ... Selecting previously unselected package r-cran-officer. Preparing to unpack .../3325-r-cran-officer_0.6.7+dfsg-1_all.deb ... Unpacking r-cran-officer (0.6.7+dfsg-1) ... Selecting previously unselected package r-cran-flextable. Preparing to unpack .../3326-r-cran-flextable_0.9.7-1_all.deb ... Unpacking r-cran-flextable (0.9.7-1) ... Selecting previously unselected package r-cran-epir. Preparing to unpack .../3327-r-cran-epir_2.0.80+dfsg-1_all.deb ... Unpacking r-cran-epir (2.0.80+dfsg-1) ... Selecting previously unselected package r-cran-estimatr. Preparing to unpack .../3328-r-cran-estimatr_1.0.6-1_amd64.deb ... Unpacking r-cran-estimatr (1.0.6-1) ... Selecting previously unselected package r-cran-evd. Preparing to unpack .../3329-r-cran-evd_2.3-7.1-1_amd64.deb ... Unpacking r-cran-evd (2.3-7.1-1) ... Selecting previously unselected package r-cran-terra. Preparing to unpack .../3330-r-cran-terra_1.8-29-1_amd64.deb ... Unpacking r-cran-terra (1.8-29-1) ... Selecting previously unselected package r-cran-raster. Preparing to unpack .../3331-r-cran-raster_3.6-31-1_amd64.deb ... Unpacking r-cran-raster (3.6-31-1) ... Selecting previously unselected package r-cran-exactextractr. Preparing to unpack .../3332-r-cran-exactextractr_0.10.0-1+b1_amd64.deb ... Unpacking r-cran-exactextractr (0.10.0-1+b1) ... Selecting previously unselected package r-cran-expm. Preparing to unpack .../3333-r-cran-expm_1.0-0-1_amd64.deb ... Unpacking r-cran-expm (1.0-0-1) ... Selecting previously unselected package r-cran-extradistr. Preparing to unpack .../3334-r-cran-extradistr_1.10.0-1_amd64.deb ... Unpacking r-cran-extradistr (1.10.0-1) ... Selecting previously unselected package r-cran-flashclust. Preparing to unpack .../3335-r-cran-flashclust_1.01-2-3_amd64.deb ... Unpacking r-cran-flashclust (1.01-2-3) ... Selecting previously unselected package r-cran-leaps. Preparing to unpack .../3336-r-cran-leaps_3.2-1_amd64.deb ... Unpacking r-cran-leaps (3.2-1) ... Selecting previously unselected package r-cran-multcompview. Preparing to unpack .../3337-r-cran-multcompview_0.1-10-1_all.deb ... Unpacking r-cran-multcompview (0.1-10-1) ... Selecting previously unselected package r-cran-scatterplot3d. Preparing to unpack .../3338-r-cran-scatterplot3d_0.3-44-1_all.deb ... Unpacking r-cran-scatterplot3d (0.3-44-1) ... Selecting previously unselected package r-cran-factominer. Preparing to unpack .../3339-r-cran-factominer_2.11-1_amd64.deb ... Unpacking r-cran-factominer (2.11-1) ... Selecting previously unselected package r-cran-factoextra. 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Selecting previously unselected package r-cran-ggthemes. Preparing to unpack .../3382-r-cran-ggthemes_5.1.0-1_all.deb ... Unpacking r-cran-ggthemes (5.1.0-1) ... Selecting previously unselected package r-cran-git2r. Preparing to unpack .../3383-r-cran-git2r_0.35.0-1_amd64.deb ... Unpacking r-cran-git2r (0.35.0-1) ... Selecting previously unselected package r-cran-tmb. Preparing to unpack .../3384-r-cran-tmb_1.9.17-1_amd64.deb ... Unpacking r-cran-tmb (1.9.17-1) ... Selecting previously unselected package r-cran-glmmtmb. Preparing to unpack .../3385-r-cran-glmmtmb_1.1.10+dfsg-1_amd64.deb ... Unpacking r-cran-glmmtmb (1.1.10+dfsg-1) ... Selecting previously unselected package r-cran-gmm. Preparing to unpack .../3386-r-cran-gmm_1.8-1_amd64.deb ... Unpacking r-cran-gmm (1.8-1) ... Selecting previously unselected package r-cran-gmp. Preparing to unpack .../3387-r-cran-gmp_0.7-5-1_amd64.deb ... Unpacking r-cran-gmp (0.7-5-1) ... Selecting previously unselected package r-cran-goftest. 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Unpacking skewer (0.2.2-6+b1) ... Selecting previously unselected package smithwaterman. Preparing to unpack .../3739-smithwaterman_0.0+git20160702.2610e25-12+b2_amd64.deb ... Unpacking smithwaterman (0.0+git20160702.2610e25-12+b2) ... Selecting previously unselected package smrtanalysis. Preparing to unpack .../3740-smrtanalysis_0~20210112_all.deb ... Unpacking smrtanalysis (0~20210112) ... Selecting previously unselected package snap. Preparing to unpack .../3741-snap_2013-11-29-11_amd64.deb ... Unpacking snap (2013-11-29-11) ... Selecting previously unselected package snap-aligner. Preparing to unpack .../3742-snap-aligner_2.0.3+dfsg-2_amd64.deb ... Unpacking snap-aligner (2.0.3+dfsg-2) ... Selecting previously unselected package sniffles. Preparing to unpack .../3743-sniffles_2.6.0-1_all.deb ... Unpacking sniffles (2.6.0-1) ... Selecting previously unselected package snp-sites. Preparing to unpack .../3744-snp-sites_2.5.1-2+b2_amd64.deb ... Unpacking snp-sites (2.5.1-2+b2) ... 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Setting up libgs-common (10.05.0~dfsg-1) ... Setting up libbrotli1:amd64 (1.1.0-2+b7) ... Setting up spaln-data (3.0.2+dfsg-2) ... Setting up libtreelayout-java (1.0.3-2) ... Setting up libfontbox-java (1:1.8.16-5) ... Setting up autodock (4.2.6-9) ... ---------------------------------------------------------------------- ______ / \ / \ / \ \ /\ / \ / \ / \/ /\ \/ / \ /____\ AutoDock and AutoGrid are free software, distributed under the terms of the GNU General Public License 2 or later. This allows us to share the code and to be open for improvement from the whole scientific community. The development of the AutoDock suite is entirely funded by research grants. For that reason, we ask you to register at the AutoDock Registration page http://autodock.scripps.edu/downloads/autodock-registration in order to keep track of number of unique downloads, which we use to support the grant applications. Installing the Debian popularity-contest package is also encouraged. Thank you, and happy docking! The AutoDock Development Team If you plan to use AutoDock for commercial purposes we encourage donations to the Olson laboratory to help support further development of the AutoDock 4 suite of programs. Donation information provided on the download page. ---------------------------------------------------------------------- Setting up libedit2:amd64 (3.1-20250104-1) ... Setting up libsqlite3-0:amd64 (3.46.1-2) ... Setting up libsasl2-modules:amd64 (2.1.28+dfsg1-9) ... Setting up libisal2 (2.31.1-1.1) ... Setting up liblab-gamut1:amd64 (2.42.4-3) ... Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-2) ... Setting up libuv1t64:amd64 (1.50.0-2) ... Setting up libmagic1t64:amd64 (1:5.46-3) ... Setting up swarm (3.1.5+dfsg-2) ... Setting up phylip (1:3.697+dfsg-4) ... Setting up libpicocli-java (4.6.2-2) ... Setting up libasm-java (9.7.1-1) ... Setting up libmysofa1:amd64 (1.3.3+dfsg-1) ... Setting up disulfinder (1.2.11-12) ... Setting up mptp (0.2.5-1) ... 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Setting up node-fortawesome-fontawesome-free (6.7.2+ds1-1) ... Setting up libjemalloc2:amd64 (5.3.0-3) ... Setting up libparasail-dev:amd64 (2.6.2+dfsg-2) ... Setting up libjson-simple-java (2.3.0-2) ... Setting up libccp4-data (8.0.0-4) ... Setting up libsoup-3.0-common (3.6.4-3) ... Setting up libwsdl4j-java (1.6.3-4.1) ... Setting up smithwaterman (0.0+git20160702.2610e25-12+b2) ... Setting up libnewuoa0 (0.1.2-1) ... Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... Setting up king-probe (02.21-1) ... Setting up libmpg123-0t64:amd64 (1.32.10-1) ... Setting up apbs-data (3.4.1-6) ... Setting up sim4db (0~20150903+r2013-9+b1) ... Setting up libregexp-java (1.5+dfsg-1) ... Setting up libcvector2:amd64 (1.0.4.1-2+b2) ... Setting up veryfasttree (4.0.4+dfsg-1) ... Setting up libmotif-common (2.3.8-4) ... Setting up muscle (1:5.1.0-1) ... Setting up rdkit-data (202409.6-2) ... Setting up concavity (0.1+dfsg.1-6) ... Setting up libabsl20240722:amd64 (20240722.0-1.5) ... Setting up libcjson1:amd64 (1.7.18-3+b1) ... Setting up libxvidcore4:amd64 (2:1.3.7-1+b2) ... Setting up kmer-examples (0~20150903+r2013-9) ... Setting up openms-common (2.6.0+cleaned1-4) ... Setting up libmodhmm0:amd64 (1.0+dfsg-7) ... Setting up bzip2 (1.0.8-6) ... Setting up emboss-data (6.6.0+dfsg-15) ... Setting up libphobos2-ldc-shared106:amd64 (1:1.36.0-2.1) ... Setting up libldap-common (2.6.9+dfsg-2) ... Setting up libjs-sizzle (2.3.10+ds+~2.3.6-1) ... Setting up libunwind8:amd64 (1.8.1-0.1) ... Setting up libunivocity-parsers-java (2.9.1-1) ... Setting up libjs-modernizr (3.13.0-0.1) ... Setting up libnucleotidelikelihoodcore0 (1.10.4+dfsg-6) ... Setting up probalign (1.4-10) ... Setting up libwebrtc-audio-processing-1-3:amd64 (1.3-3+b1) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up soapaligner (2.20-5) ... Setting up libfml0:amd64 (0.1+git20221215.85f159e-1) ... Setting up libpostgresql-jdbc-java (42.7.5-1) ... Setting up libmpcdec6:amd64 (2:0.1~r495-3) ... Setting up libjs-angularjs (1.8.3-1) ... Setting up libfastahack0:amd64 (1.0.0+dfsg-11+b2) ... Setting up libqes0 (0.2.8+ds-1) ... Setting up libjbig0:amd64 (2.1-6.1+b2) ... Setting up libmjpegutils-2.1-0t64:amd64 (1:2.1.0+debian-8.1+b1) ... Setting up diamond-aligner (2.1.11-2) ... Setting up libncl2:amd64 (2.1.21+git20210811.b1213a7-6) ... Setting up libnetpbm11t64:amd64 (2:11.09.03-1) ... Setting up fastlink (4.1P-fix100+dfsg-5) ... Setting up mapsembler2 (2.2.4+dfsg1-4) ... Setting up scrm (1.7.4-2) ... Setting up gsort (0.1.4-3+b20) ... Setting up trf (4.09.1-6) ... Setting up libpcre2-16-0:amd64 (10.45-1) ... Setting up roguenarok (1.0.1-3) ... Setting up node-d3-path (1.0.9+~1.0.9-1) ... Setting up libaec0:amd64 (1.1.3-1+b1) ... Setting up libunixsocket-java (0.8.1-4) ... Setting up gdal-data (3.10.2+dfsg-1) ... Setting up xxd (2:9.1.1113-1) ... Setting up libsource-highlight-common (3.1.9-4.3) ... Setting up libsframe1:amd64 (2.44-3) ... Setting up tzdata-legacy (2025a-2) ... Setting up libopengl0:amd64 (1.7.0-1+b2) ... Setting up libfakeroot:amd64 (1.37.1-1) ... Setting up augustus-data (3.5.0+dfsg-4) ... Setting up libssw-java (1.1-15+b2) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up python-babel-localedata (2.17.0-1) ... Setting up dnaclust (3-7+b3) ... Setting up libxcb-util1:amd64 (0.4.1-1) ... Setting up libjansson4:amd64 (2.14-2+b3) ... Setting up dawg (1.2-4+b1) ... Setting up liboro-java (2.0.8a-14) ... Setting up libpthreadpool0:amd64 (0.0~git20240616.560c60d-1) ... Setting up libstax2-api-java (4.1-1) ... Setting up libsnappy1v5:amd64 (1.2.1-1+b1) ... Setting up t-coffee (13.45.0.4846264+really13.41.0.28bdc39+dfsg-1) ... Setting up survivor (1.0.7-4) ... Setting up poppler-data (0.4.12-1) ... Setting up liborc-0.4-0t64:amd64 (1:0.4.41-1) ... Setting up libmultiverse-core-java (0.7.0-6) ... Setting up libmatthew-debug-java (0.8.1-4) ... Setting up mmb-common (4.0.0+dfsg-5) ... Setting up jellyfish1 (1.1.11-10) ... Setting up libxcb-xkb1:amd64 (1.17.0-2+b1) ... Setting up libcharts4j-java (1.3-4) ... Setting up libxcb-image0:amd64 (0.4.0-2+b2) ... Setting up libkrb5support0:amd64 (1.21.3-5) ... Setting up libnumber-compare-perl (0.03-3) ... Setting up libexec-maven-plugin-java (3.1.0-2) ... Setting up libdw1t64:amd64 (0.192-4) ... Setting up libjs-es5-shim (4.6.7-2) ... Setting up provean (1.1.5+ds-2) ... Setting up libvo-aacenc0:amd64 (0.1.3-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-9) ... Setting up wham-align (0.1.5-8) ... Setting up libboost-atomic1.83.0:amd64 (1.83.0-4.1+b2) ... Setting up libcap2-bin (1:2.75-3) ... Setting up refmac-dictionary (5.41-3) ... Setting up fakeroot (1.37.1-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libxcb-present0:amd64 (1.17.0-2+b1) ... Setting up unicode-data (15.1.0-1) ... Setting up sibsim4 (0.20-5) ... Setting up dazzdb (1.0+git20250217.a3eefd4-1) ... Setting up ruby-minitest (5.25.4-2) ... Setting up fastp (0.24.0+dfsg-1) ... Setting up autodock-vina (1.2.7-1) ... Setting up mariadb-common (1:11.8.1-2) ... update-alternatives: using /etc/mysql/mariadb.cnf to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libsymspg2:amd64 (2.6.0-1) ... Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... Setting up libgeronimo-interceptor-3.0-spec-java (1.0.1-5) ... Setting up libcommons-collections3-java (3.2.2-3) ... Setting up libjellyfish-2.0-2:amd64 (2.3.1-4+b1) ... Setting up libasound2-data (1.2.13-1) ... Setting up libboost-serialization1.83.0:amd64 (1.83.0-4.1+b2) ... Setting up qt6-translations-l10n (6.8.2-2) ... Setting up libjs-remark-slide (0.15.0+ds-2) ... Setting up libgkl-jni (0.8.11+dfsg-2) ... Setting up infernal (1.1.5-3) ... Setting up garli (2.1-9) ... Setting up hilive (2.0a-4) ... Setting up lua-filesystem:amd64 (1.8.0-3+b2) ... Setting up libnb-absolutelayout-java (12.1-3) ... Setting up libandroid-json-org-java (20121204-20090211-6) ... Setting up fonts-cmu (0.7.0-5) ... Setting up primer3 (2.6.1-5) ... Setting up libopencore-amrwb0:amd64 (0.1.6-1+b2) ... Setting up libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1+b1) ... Setting up libtheoraenc1:amd64 (1.2.0~alpha1+dfsg-6) ... Setting up xtrans-dev (1.4.0-1) ... Setting up libblosc2-4:amd64 (2.17.0+ds-1) ... Setting up libboost-numpy1.83.0 (1.83.0-4.1+b2) ... Setting up zip (3.0-14) ... Setting up libminimap0:amd64 (0.2-8+b3) ... Setting up libfontenc1:amd64 (1:1.1.8-1+b2) ... Setting up librdp-taxonomy-tree-java (1.2.0-6) ... Setting up librhino-java (1.7.15-1) ... Setting up kalign (1:3.4.0-1+b2) ... Setting up node-clipboard (2.0.11+ds+~cs9.6.11-1) ... Setting up libz3-4:amd64 (4.13.3-1) ... Setting up libpcre2-32-0:amd64 (10.45-1) ... Setting up node-safe-buffer (5.2.1+~cs2.1.2-3) ... Setting up libblas3:amd64 (3.12.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up node-rw (1.3.3-5) ... Setting up libsoundtouch1:amd64 (2.3.3+ds-1+b1) ... Setting up libbsf-java (1:2.4.0-8) ... Setting up libprocessing-core-java (1.2.1-3) ... Setting up libjersey1-core-java (1.19.3-8) ... Setting up libglib2.0-data (2.84.0-2) ... Setting up libxcb-xinerama0:amd64 (1.17.0-2+b1) ... Setting up libunbound8:amd64 (1.22.0-1+b1) ... Setting up libpkgconf3:amd64 (1.8.1-4) ... Setting up node-d3-polygon (1.0.6+~1.0.8-1) ... Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-3) ... Setting up seqprep (1.3.2-9) ... Setting up lucy (1.20-6) ... Setting up gnome-accessibility-themes (3.28-4) ... Setting up rpcsvc-proto (1.4.3-1) ... Setting up linux-sysctl-defaults (4.11) ... Setting up lua-md5:amd64 (1.2+git+1+8d87fee-2+b2) ... Setting up vim-common (2:9.1.1113-1) ... Setting up libtepl-common (6.12.0-2) ... Setting up dialign-tx-data (1.0.2-15) ... Setting up libgles2:amd64 (1.7.0-1+b2) ... Setting up edtsurf (0.2009-10) ... Setting up libasound2t64:amd64 (1.2.13-1+b1) ... Setting up libmunge2:amd64 (0.5.16-1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3.1) ... Setting up lagan (2.0-10) ... Setting up qttranslations5-l10n (5.15.15-2) ... Setting up libjxr0t64:amd64 (1.2~git20170615.f752187-5.3) ... Setting up emacsen-common (3.0.7) ... Setting up libslang2:amd64 (2.3.3-5+b2) ... Setting up mustang (3.2.4-1) ... Setting up libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.1) ... Setting up rampler (2.1.1-1) ... Setting up libva2:amd64 (2.22.0-3) ... Setting up libjaxen-java (1.1.6-5) ... Setting up libapiguardian-java (1.1.2-1) ... Setting up boxshade (3.3.1-14) ... Setting up ruby-test-unit (3.6.2-1) ... Setting up libjs-filesaver (2.0.4+dfsg+~2.0.5-2) ... Setting up libjbcrypt-java (0.4-3) ... Setting up libx11-data (2:1.8.12-1) ... Setting up make (4.4.1-1) ... Setting up libsvtav1enc2:amd64 (2.3.0+dfsg-1) ... Setting up ncbi-seg (0.0.20000620-7) ... Setting up quorum (1.1.2-2) ... Setting up libepoxy0:amd64 (1.5.10-2) ... Setting up node-d3-quadtree (1.0.7+~1.0.9-1) ... Setting up libnspr4:amd64 (2:4.36-1) ... Setting up libboost-chrono1.83.0t64:amd64 (1.83.0-4.1+b2) ... Setting up gnupg-l10n (2.2.46-5) ... Setting up libxcb-sync1:amd64 (1.17.0-2+b1) ... Setting up libjbig2dec0:amd64 (0.20-1+b3) ... Setting up perm (0.4.0-8+b1) ... Setting up node-balanced-match (2.0.0-1) ... Setting up fml-asm (0.1+git20221215.85f159e-1) ... Setting up gnustep-multiarch:amd64 (2.9.3-6) ... Setting up libboost-iostreams1.83.0:amd64 (1.83.0-4.1+b2) ... Setting up unikmer (0.20.0-1+b6) ... Setting up libteckit0:amd64 (2.5.12+ds1-1+b1) ... Setting up libjs-bootswatch (3.3.7+dfsg2-1.1) ... Setting up node-brace-expansion (2.0.1+~1.1.0-1) ... Setting up libjsoncpp26:amd64 (1.9.6-3) ... Setting up bash-completion (1:2.16.0-7) ... Setting up scythe (0.994+git20141017.20d3cff-5) ... Setting up proda (1.0-14) ... Setting up sim4 (0.0.20121010-8) ... Setting up libjansi-java (2.4.1-2) ... Setting up libzxing3:amd64 (2.3.0-3) ... Setting up spaced (1.2.0-201605+dfsg-4) ... Setting up libpathplan4:amd64 (2.42.4-3) ... Setting up aglfn (1.7+git20191031.4036a9c-2) ... Setting up libxcb-cursor0:amd64 (0.1.5-1) ... Setting up libapache-pom-java (33-2) ... Setting up ntcard (1.2.2+dfsg-9) ... Setting up libavahi-common-data:amd64 (0.8-16) ... Setting up libxpp3-java (1.1.4c-4) ... Setting up libann0 (1.1.2+doc-9+b1) ... Setting up libncurses6:amd64 (6.5+20250216-2) ... Setting up libatinject-jsr330-api-java (1.0+ds1-6) ... Setting up libdbus-1-3:amd64 (1.16.2-2) ... Setting up ruby-net-telnet (0.2.0-1) ... Setting up liblzf1:amd64 (3.6-4+b3) ... Setting up xz-utils (5.6.4-1) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libwebsocket-api-java (1.1-2) ... Setting up zenity-common (4.1.90-1) ... Setting up libfribidi0:amd64 (1.0.16-1) ... Setting up libopus0:amd64 (1.5.2-2) ... Setting up t1utils (1.41-4) ... Setting up libquadmath0:amd64 (14.2.0-19) ... Setting up libzeus-jscl-java (1.72-2) ... Setting up libfaad2:amd64 (2.11.2-1) ... Setting up skewer (0.2.2-6+b1) ... Setting up libtexlua53-5:amd64 (2024.20240313.70630+ds-6) ... Setting up fastdnaml (1.2.2-18) ... Setting up libimagequant0:amd64 (2.18.0-1+b2) ... Setting up seqan-apps (2.4.0+dfsg-16) ... Setting up libproc2-0:amd64 (2:4.0.4-7) ... Setting up pymol-data (3.1.0+dfsg-1) ... Setting up libplexus-interpolation-java (1.27-1) ... Setting up libjs-d3 (3.5.17-4) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up lambda-align2 (2.0.1-3) ... Setting up libbambamc0:amd64 (0.0.50-6+b2) ... Setting up intel-media-va-driver:amd64 (25.1.3+dfsg1-1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libssl-dev:amd64 (3.4.1-1) ... Setting up libspoa7.0.0:amd64 (4.1.4-2+b1) ... Setting up assembly-stats (1.0.1+ds-6) ... Setting up libitext5-java (5.5.13.3-4) ... Setting up libpng16-16t64:amd64 (1.6.47-1.1) ... Setting up libhwloc15:amd64 (2.12.0-1) ... Setting up libxml-commons-resolver1.1-java (1.2-11) ... Setting up libcares2:amd64 (1.34.4-2.1) ... Setting up libimath-3-1-29t64:amd64 (3.1.12-1+b3) ... Setting up usb-modeswitch-data (20191128-7) ... Setting up libmpc3:amd64 (1.3.1-1+b3) ... Setting up python3-numpy-dev:amd64 (1:2.2.3+ds-5) ... Setting up libmnl0:amd64 (1.0.5-3) ... Setting up libgumbo3:amd64 (0.13.0+dfsg-2) ... Setting up systemd-timesyncd (257.4-3) ... Creating group 'systemd-timesync' with GID 997. Creating user 'systemd-timesync' (systemd Time Synchronization) with UID 997 and GID 997. Created symlink '/etc/systemd/system/dbus-org.freedesktop.timesync1.service' → '/usr/lib/systemd/system/systemd-timesyncd.service'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-timesyncd.service' → '/usr/lib/systemd/system/systemd-timesyncd.service'. Setting up libatomic1:amd64 (14.2.0-19) ... Setting up libvorbis0a:amd64 (1.3.7-2+b1) ... Setting up paraclu (10-1) ... Setting up libxz-java (1.9-1) ... Setting up libitext1-java (1.4-7) ... Setting up libidn12:amd64 (1.42-3) ... Setting up f2j (0.8.1+dfsg-5) ... Setting up patch (2.7.6-7) ... Setting up libcommons-pool-java (1.6-5) ... Setting up plast (2.3.2+dfsg-10+b5) ... Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... Setting up dwgsim (0.1.14-3) ... Setting up node-d3-collection (1.0.7+~1.0.10-1) ... Setting up libmariadb-java (2.7.6-1) ... Setting up binfmt-support (2.2.2-7) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Created symlink '/etc/systemd/system/multi-user.target.wants/binfmt-support.service' → '/usr/lib/systemd/system/binfmt-support.service'. Setting up libmpfi0:amd64 (1.5.4+ds-4) ... Setting up libslow5-0t64:amd64 (0.7.0+dfsg-3+b6) ... Setting up libmariadb3:amd64 (1:11.8.1-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up unixodbc-common (2.3.12-2) ... Setting up libflac14:amd64 (1.5.0+ds-2) ... Setting up libcqrlib2:amd64 (1.1.4-3+b2) ... Setting up libjbzip2-java (0.9.1-8) ... Setting up libgav1-1:amd64 (0.19.0-3+b1) ... Setting up libdv4t64:amd64 (1.0.0-17.1+b1) ... Setting up libpcsclite1:amd64 (2.3.1-1) ... Setting up libdbus-java (2.8-11) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up kaptive-data (2.0.8-1) ... Setting up fonts-texgyre (20180621-6) ... Setting up libsensors5:amd64 (1:3.6.0-10+b1) ... Setting up tree-puzzle-doc (5.3~rc16+dfsg-12) ... Setting up libopenh264-8:amd64 (2.6.0+dfsg-2) ... Setting up libintervalstorej-java (1.2+dfsg-5) ... Setting up libaacs0:amd64 (0.11.1-4+b1) ... Setting up libmongodb-java (3.6.3-2) ... Setting up libjcsp-java (1.1-rc4-3) ... Setting up libncursesw6:amd64 (6.5+20250216-2) ... Setting up libtinyxml2.6.2v5:amd64 (2.6.2-7) ... Setting up wise-data (2.4.1-25) ... Setting up libk5crypto3:amd64 (1.21.3-5) ... Setting up libjs-prototype (1.7.3-2) ... Setting up pocketsphinx-en-us (0.8+5prealpha+1-15) ... Setting up libminpack1:amd64 (19961126+dfsg1-5+b2) ... Setting up libxtables12:amd64 (1.8.11-2) ... Setting up lynx-common (2.9.2-1) ... Setting up libpal-java (1.5.1+dfsg-9) ... Setting up libjgraph-java (5.12.4.2+dfsg-7) ... Setting up libisorelax-java (20041111-14) ... Setting up libbamtools2.5.2:amd64 (2.5.2+dfsg-6+b1) ... Setting up libgc1:amd64 (1:8.2.8-1) ... Setting up libactivation-java (1.2.0-2) ... Setting up amap-align (2.2+git20080214.600fc29+dfsg-2) ... Setting up libltdl7:amd64 (2.5.4-4) ... Setting up libfftw3-double3:amd64 (3.3.10-2+b1) ... Setting up libhamcrest-java (2.2-2) ... Setting up libcifpp-data (7.0.9-1) ... Setting up libjsp-api-java (2.3.4-3) ... Setting up libkpathsea6:amd64 (2024.20240313.70630+ds-6) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-9) ... Setting up libgfortran5:amd64 (14.2.0-19) ... Setting up berkeley-express (1.5.3+dfsg-3+b3) ... Setting up libraw23t64:amd64 (0.21.3-1+b1) ... Setting up libvulkan1:amd64 (1.4.309.0-1) ... Setting up libgatbcore3:amd64 (1.4.2+dfsg-13+b4) ... Setting up libmimepull-java (1.9.7-2) ... Setting up node-d3-voronoi (1.1.4+~1.1.9-1) ... Setting up libsdsl3:amd64 (2.1.1+dfsg-5) ... Setting up libnghttp3-9:amd64 (1.8.0-1) ... Setting up node-d3-dispatch (1.0.6+~1.0.9-1) ... Setting up libcpuinfo0:amd64 (0.0~git20250203.aaac07e-1) ... Setting up libltc11:amd64 (1.3.2-1+b2) ... Setting up libgzstream0:amd64 (1.5+git20171107.9a20658-3) ... Setting up libapfloat-java (1.14.0-2) ... Setting up nodejs-doc (20.19.0+dfsg-1) ... Setting up savvy-util (2.1.0-3) ... Setting up libwebp7:amd64 (1.5.0-0.1) ... Setting up libmhash2:amd64 (0.9.9.9-10) ... Setting up node-d3-time (1.1.0+~1.1.1-1) ... Setting up libnghttp3-dev:amd64 (1.8.0-1) ... Setting up libcolt-free-java (1.2.0+dfsg-8) ... Setting up ruby-webrick (1.9.1-1) ... Setting up liblzma-dev:amd64 (5.6.4-1) ... Setting up libubsan1:amd64 (14.2.0-19) ... Setting up libavtp0:amd64 (0.2.0-2) ... Setting up libgif7:amd64 (5.2.2-1+b1) ... Setting up libedlib1:amd64 (1.2.7-6+b3) ... Setting up libjfreesvg-java (5.0.6-2) ... Setting up libantlr3-runtime-java (3.5.3-2) ... Setting up mmseqs2 (15-6f452+ds-2+b2) ... Setting up libodbc2:amd64 (2.3.12-2) ... Setting up libgedit-gtksourceview-300-common (299.5.0-1) ... Setting up spoa (4.1.4-2+b1) ... Setting up liburiparser1:amd64 (0.9.8+dfsg-2) ... Setting up node-commander (9.4.1-1) ... Setting up libffi8:amd64 (3.4.7-1) ... Setting up rate4site (3.0.0-8) ... Setting up libxnnpack0.20241108:amd64 (0.0~git20241108.4ea82e5-1) ... Setting up libbdplus0:amd64 (0.2.0-4+b1) ... Setting up fonts-dejavu-extra (2.37-8) ... Setting up libnuma1:amd64 (2.0.18-1+b1) ... Setting up node-undici (7.3.0+dfsg1+~cs24.12.11-1) ... Setting up libpcre2-posix3:amd64 (10.45-1) ... Setting up plink (1.07+dfsg-4+b1) ... Setting up libvidstab1.1:amd64 (1.1.0-2+b2) ... Setting up libfyba0t64:amd64 (4.1.1-11+b1) ... Setting up libvpx9:amd64 (1.15.0-2) ... Setting up profnet-snapfun (1.0.22-8) ... Setting up libtrove3-java (3.0.3-5) ... Setting up librttopo1:amd64 (1.1.0-4) ... Setting up ksh93u+m (1.0.10-2) ... update-alternatives: using /bin/ksh93 to provide /bin/ksh (ksh) in auto mode update-alternatives: using /usr/bin/shcomp93 to provide /usr/bin/shcomp (shcomp) in auto mode Setting up libudunits2-data (2.2.28-7) ... Setting up alsa-topology-conf (1.2.5.1-3) ... Setting up loki (2.4.7.4-12) ... Setting up node-d3-array (3.2.0+~cs5.0.6-2) ... Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... Setting up libflite1:amd64 (2.2-7) ... Setting up libdav1d7:amd64 (1.5.1-1) ... Setting up ksh (20240113-1.0.10-2) ... Setting up libmtdev1t64:amd64 (1.1.7-1) ... Setting up perl-modules-5.40 (5.40.1-2) ... Setting up libfreemarker-java (2.3.32-2) ... Setting up fonts-gfs-baskerville (1.1-6) ... Setting up datamash (1.8-1) ... Setting up libjs-d3-format (1:1.4.5+~1.4.2-2) ... Setting up sensible-utils (0.0.24) ... Setting up libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libngs-c++3:amd64 (3.0.9+dfsg-7.1) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b2) ... Setting up libsuma1 (1.0.36-5) ... Setting up libduktape207:amd64 (2.7.0-2+b2) ... Setting up libasyncns0:amd64 (0.8-6+b5) ... Setting up libwildmidi2:amd64 (0.4.3-1+b3) ... Setting up libxshmfence1:amd64 (1.3-1+b3) ... Setting up libjsoup-java (1.15.3-1) ... Setting up libhwasan0:amd64 (14.2.0-19) ... Setting up pigz (2.8-1) ... Setting up paml (4.9j+dfsg-6) ... Setting up subread (2.0.8+dfsg-1) ... Setting up libmail-java (1.6.5-3) ... Setting up at-spi2-common (2.56.0-3) ... Setting up libcommons-math-java (2.2-9) ... Setting up gpgv (2.2.46-5) ... Setting up libccp4c0t64:amd64 (8.0.0-4) ... Setting up libcrypt-dev:amd64 (1:4.4.38-1) ... Setting up libwavpack1:amd64 (5.8.1-1) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up libbs2b0:amd64 (3.1.0+dfsg-8+b1) ... Setting up bamtools (2.5.2+dfsg-6+b1) ... Setting up dialign-tx (1.0.2-15) ... Setting up libxcb-randr0:amd64 (1.17.0-2+b1) ... Setting up dbus-session-bus-common (1.16.2-2) ... Setting up librav1e0.7:amd64 (0.7.1-9+b1) ... Setting up libasan8:amd64 (14.2.0-19) ... Setting up snpomatic (1.0-7) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up pal2nal (14.1-3) ... Setting up libassuan9:amd64 (3.0.2-2) ... Setting up libxml-commons-external-java (1.4.01-6) ... Setting up procps (2:4.0.4-7) ... Setting up libapr1t64:amd64 (1.7.5-1) ... Setting up libxbean-reflect-java (4.5-9) ... Setting up mira-rfam-12s-rrna (4.9.6-11) ... Will install rfam_rrna-21-12 with kmer size 21 as MIRA default rRNA filter in /usr/bin/../share/mira/mhs Installing. This can take a minute or two, please be patient. Done. MIRA can now use the functionality to filter for rRNA during assemblies. MIRABAIT can now use the '-j rrna' option. Setting up libtingea0:amd64 (21-361-2+b2) ... Setting up sse4.2-support (26) ... Setting up liblua5.1-0:amd64 (5.1.5-11) ... Setting up libblosc1:amd64 (1.21.5+ds-1+b2) ... Setting up fonts-liberation (1:2.1.5-3) ... Setting up libjargs-java (1.0.0-5) ... Setting up libnl-3-200:amd64 (3.7.0-2) ... Setting up kma (1.4.21-1) ... Setting up libservlet-api-java (4.0.1-2) ... Setting up libjim0.83:amd64 (0.83-2) ... Setting up gpgconf (2.2.46-5) ... Setting up seqan-needle (1.0.3+ds-1) ... Setting up libbetter-appframework-java (1.9.2-2) ... Setting up libpsm2-2 (11.2.185-2.1) ... Setting up soapdenovo2 (242+dfsg-4) ... Setting up libopentest4j-java (1.2.0-4) ... Setting up openmpi-common (5.0.7-1) ... Setting up daligner (1.0+git20240119.335105d-3) ... Setting up libopencore-amrnb0:amd64 (0.1.6-1+b2) ... Setting up libtasn1-6:amd64 (4.20.0-2) ... Setting up clustalw (2.1+lgpl-7) ... Setting up r-mathlib (4.4.3-1+b1) ... Setting up libmd4c0:amd64 (0.5.2-2+b1) ... Setting up libjackson2-core-java (2.14.1-1) ... Setting up libdca0:amd64 (0.0.7-2+b2) ... Setting up libc6-i386 (2.41-6) ... Setting up libzimg2:amd64 (3.0.5+ds1-1+b2) ... Setting up fastml (3.11-4) ... Setting up fonts-lmodern (2.005-1) ... Setting up libsuitesparseconfig7:amd64 (1:7.10.1+dfsg-1) ... Setting up libgedit-amtk-5-common (5.9.1-1) ... Setting up liblua5.4-0:amd64 (5.4.7-1+b2) ... Setting up libopenjp2-7:amd64 (2.5.3-2) ... Setting up git-man (1:2.49.0-1) ... Setting up libx11-6:amd64 (2:1.8.12-1) ... Setting up autogrid (4.2.6-9) ... Setting up ncbi-vdb-data (3.0.9+dfsg-2) ... Setting up libopenal-data (1:1.24.2-1) ... Setting up phipack (0.0.20160614-5) ... Setting up libthai-data (0.1.29-2) ... Setting up libpcg-cpp-dev (0.98.1-2) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up libonnx1t64:amd64 (1.17.0-3+b1) ... Setting up fasttree (2.1.11-2) ... Setting up netbase (6.5) ... Setting up node-bootstrap-sass (3.4.3-2) ... Setting up libsnp-sites1:amd64 (2.5.1-2+b2) ... Setting up libngtcp2-16:amd64 (1.11.0-1) ... Setting up libjson-glib-1.0-common (1.10.6+ds-2) ... Setting up acedb-other (4.9.39+dfsg.02-9) ... Setting up libcommons-math3-java (3.6.1-4) ... Setting up sgml-base (1.31) ... Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... Setting up libwildmagic-common (5.17+cleaned1-7) ... Setting up libgtk2.0-common (2.24.33-7) ... Setting up libcapnp-1.1.0:amd64 (1.1.0-2) ... Setting up libcdt5:amd64 (2.42.4-3) ... Setting up libkrb5-3:amd64 (1.21.3-5) ... Setting up libcgraph6:amd64 (2.42.4-3) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1+b3) ... Setting up libunibreak6:amd64 (6.1-2+b1) ... Setting up apache2-data (2.4.63-1) ... Setting up fonts-droid-fallback (1:8.1.0r7-1~1.gbp36536b) ... Setting up libcneartree7t64:amd64 (5.1.1+dfsg1-2.1+b1) ... Setting up libwayland-egl1:amd64 (1.23.1-3) ... Setting up libusb-1.0-0:amd64 (2:1.0.28-1) ... Setting up libstemmer0d:amd64 (2.2.0-4+b2) ... Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... Setting up libicu76:amd64 (76.1-3) ... Setting up node-minimatch (9.0.3-5) ... Setting up libmbedcrypto16:amd64 (3.6.2-3) ... Setting up libxkbfile1:amd64 (1:1.1.0-1+b4) ... Setting up libibatis-java (2.3.4.726-7) ... Setting up libpaper2:amd64 (2.2.5-0.3+b1) ... Setting up libdjvulibre-text (3.5.28-2) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libhttpcore-java (4.4.16-1) ... Setting up pandoc-data (3.1.11.1-3) ... Setting up libmuparser2v5:amd64 (2.3.4-1+b1) ... Setting up indelible (1.03-6) ... Setting up libboost-math1.83.0:amd64 (1.83.0-4.1+b2) ... Setting up libjam-java (0.1.git20240425.aec45be+dfsg-1) ... Setting up libtsan2:amd64 (14.2.0-19) ... Setting up libjoptsimple-java (5.0.4-7) ... Setting up vcfanno (0.3.5+ds-2+b6) ... Setting up libmpeg2encpp-2.1-0t64:amd64 (1:2.1.0+debian-8.1+b1) ... Setting up libopengl-dev:amd64 (1.7.0-1+b2) ... Setting up lambda-align (1.0.3-6) ... Setting up fonts-circos-symbols (0.69.9+dfsg-2) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up dmidecode (3.6-2) ... Setting up libhunspell-1.7-0:amd64 (1.7.2+really1.7.2-10+b4) ... Setting up libcoordgen3:amd64 (3.0.2-1+b2) ... Setting up libfuse3-4:amd64 (3.17.1~rc1-3) ... Setting up ruby-did-you-mean (1.6.3-2) ... Setting up glib-networking-common (2.80.1-1) ... Setting up node-d3-geo (1.12.1+~1.12.4-1) ... Setting up libxerces2-java (2.12.2-1) ... Setting up fonts-liberation-sans-narrow (1:1.07.6-4) ... Setting up libgmbal-java (4.0.0-b002-1.1) ... Setting up libbinutils:amd64 (2.44-3) ... Setting up vim-runtime (2:9.1.1113-1) ... Setting up harvest-tools (1.3-8+b5) ... Setting up lsb-release (12.1-1) ... Setting up dbus-system-bus-common (1.16.2-2) ... Creating group 'messagebus' with GID 996. Creating user 'messagebus' (System Message Bus) with UID 996 and GID 996. Setting up profnet-prof (1.0.22-8) ... Setting up libjheatchart-java (0.6-2) ... Setting up libjaxp1.3-java (1.3.05-6) ... Setting up elph (1.0.1-5) ... Setting up menu (2.1.51) ... Setting up node-xtend (4.0.2-3) ... Setting up libzeep5.1 (5.1.8-1+b1) ... Setting up libfido2-1:amd64 (1.15.0-1+b1) ... Setting up libjs-jquery-hotkeys (0.2.0-1) ... Setting up libisl23:amd64 (0.27-1) ... Setting up seqan-raptor (3.0.1+ds-9) ... Setting up libgsl28:amd64 (2.8+dfsg-5) ... Setting up libde265-0:amd64 (1.0.15-1+b3) ... Setting up libc-dev-bin (2.41-6) ... Setting up libfann2:amd64 (2.2.0+ds-8+b3) ... Setting up libkmlbase1t64:amd64 (1.3.0-12+b2) ... Setting up libx265-215:amd64 (4.1-2) ... Setting up libdaemon0:amd64 (0.14-7.1+b3) ... Setting up librelaxng-datatype-java (1.0+ds1-4) ... Setting up meryl (0~20150903+r2013-9+b1) ... Setting up baitfisher (1.2.7+git20211020.de26d5c+dfsg-2) ... Setting up libdivsufsort3:amd64 (2.0.1-6+b1) ... Setting up libsamplerate0:amd64 (0.2.2-4+b2) ... Setting up timgm6mb-soundfont (1.3-5) ... update-alternatives: using /usr/share/sounds/sf2/TimGM6mb.sf2 to provide /usr/share/sounds/sf2/default-GM.sf2 (default-GM.sf2) in auto mode update-alternatives: using /usr/share/sounds/sf2/TimGM6mb.sf2 to provide /usr/share/sounds/sf3/default-GM.sf3 (default-GM.sf3) in auto mode Setting up libantlr-java (2.7.7+dfsg-14) ... Setting up genometester (4.0+git20200511.91cecb5+dfsg-1) ... Setting up libyaml-snake-java (1.33-2) ... Setting up python-matplotlib-data (3.8.3-7) ... Setting up libtasn1-6-dev:amd64 (4.20.0-2) ... Setting up libnss-mdns:amd64 (0.15.1-4+b1) ... Setting up microbiomeutil-data (20101212+dfsg1-6) ... Setting up openssl (3.4.1-1) ... Setting up libwebpmux3:amd64 (1.5.0-0.1) ... Setting up clonalframeml (1.13-1) ... Setting up parasail (2.6.2+dfsg-2) ... Setting up libgpg-error-l10n (1.51-3) ... Setting up velvet (1.2.10+dfsg1-9) ... Setting up libjsonp-java (1.1.2-4) ... Setting up libinchi1.07 (1.07.3+dfsg-1) ... Setting up libdeflate-dev:amd64 (1.23-1+b1) ... Setting up libopenmm8.1 (8.1.2+dfsg-11) ... Setting up metastudent-data (2.0.1-8) ... Setting up node-normalize.css (8.0.1-5) ... Setting up tabix (1.21+ds-1) ... Setting up node-d3-transition (1.3.2+~1.3.2-1) ... Setting up tigr-glimmer (3.02b-6+b1) ... Setting up libdrm-common (2.4.124-1) ... Setting up libyuv0:amd64 (0.0.1904.20250204-1) ... Setting up libcdi-api-java (1.2-4) ... Setting up libsnappy-jni (1.1.10.7-1) ... Setting up libmplex2-2.1-0t64:amd64 (1:2.1.0+debian-8.1+b1) ... Setting up kmc (3.2.4+dfsg-1+b2) ... Setting up libezmorph-java (1.0.6-4) ... Setting up libhnswlib-dev (0.8.0-1) ... Setting up libxcomposite1:amd64 (1:0.4.6-1) ... Setting up libsm6:amd64 (2:1.2.4-1) ... Setting up libpam-cap:amd64 (1:2.75-3) ... Setting up tantan (51-1) ... Setting up openjfx-source (11.0.11+1-6) ... Setting up libjxl0.11:amd64 (0.11.1-4) ... Setting up dialign (2.2.1-13) ... Setting up libclc-19-dev (1:19.1.7-3) ... Setting up libpython3.13-stdlib:amd64 (3.13.2-2) ... Setting up vmatch (2.3.1+dfsg-9) ... Setting up libssw0:amd64 (1.1-15+b2) ... Setting up libjson-c5:amd64 (0.18+ds-1) ... Setting up libevdev2:amd64 (1.13.3+dfsg-1) ... Setting up ruby-xmlrpc (0.3.3-2) ... Setting up libhawtjni-runtime-java (1.18-1) ... Setting up publicsuffix (20250306.2152-0.1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.3+b1) ... Setting up fonts-noto-core (20201225-2) ... Setting up python-tables-data (3.10.2-2) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up sphinx-rtd-theme-common (3.0.2+dfsg-2) ... Setting up xdg-utils (1.2.1-2) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libjs-mootools (1.4.5~debian1-3) ... Setting up libsquid1t64:amd64 (1.9g+cvs20050121-15.1+b2) ... Setting up bedtools (2.31.1+dfsg-2) ... Setting up tcsh (6.24.13-2) ... update-alternatives: using /bin/tcsh to provide /bin/csh (csh) in auto mode Setting up libcc1-0:amd64 (14.2.0-19) ... Setting up libldap2:amd64 (2.6.9+dfsg-2) ... Setting up iso-codes (4.17.0-1) ... Setting up libpwiz3t64 (3.0.18342-4.1) ... Setting up libxmuu1:amd64 (2:1.1.3-3+b4) ... Setting up dbus-bin (1.16.2-2) ... Setting up libargs4j-java (2.33-2) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up fastq-pair (1.0-3) ... Setting up sqlite3 (3.46.1-2) ... Setting up node-thenby (1.3.4+git20200720.0fd165a+ds-5) ... Setting up libbrotli-dev:amd64 (1.1.0-2+b7) ... Setting up gpg (2.2.46-5) ... Setting up node-d3-random (1.1.2+~1.1.3-1) ... Setting up libfmt10:amd64 (10.1.1+ds1-4) ... Setting up libzvbi-common (0.2.44-1) ... Setting up libbpf1:amd64 (1:1.5.0-2) ... Setting up libsecret-common (0.21.6-3) ... Setting up liblsan0:amd64 (14.2.0-19) ... Setting up libsprng2 (2.0a-16) ... Setting up yelp-xsl (42.1-3) ... Setting up libmp3lame0:amd64 (3.100-6+b3) ... Setting up libblas-dev:amd64 (3.12.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up node-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libsz2:amd64 (1.1.3-1+b1) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libsvm3:amd64 (3.24+ds-6.1) ... Setting up libitm1:amd64 (14.2.0-19) ... Setting up flash (1.2.11-2) ... Setting up libhttp-parser2.9:amd64 (2.9.4-6+b2) ... Setting up libf2j-java (0.8.1+dfsg-5) ... Setting up libvorbisenc2:amd64 (1.3.7-2+b1) ... Setting up libsynctex2:amd64 (2024.20240313.70630+ds-6) ... Setting up libkmod2:amd64 (34.1-2) ... Setting up libgedit-gfls-common (0.3.0-1) ... Setting up libpython3-stdlib:amd64 (3.13.2-2) ... Setting up prank (0.0.170427+dfsg-3) ... Setting up libargtable2-0 (13-3) ... Setting up libpbcopper2.3.0:amd64 (2.3.0+dfsg-2+b2) ... Setting up libdvdnav4:amd64 (6.1.1-3+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libball1.5-data (1.5.0+git20180813.37fc53c-11) ... Setting up libpopt0:amd64 (1.19+dfsg-2) ... Setting up pbsim (1.0.3+git20180330.e014b1d+dfsg-3) ... Setting up maq (0.7.1-10) ... Setting up laptop-detect (0.16+nmu1) ... Setting up libaa1:amd64 (1.4p5-51.1+b1) ... Setting up gwama (2.2.2+dfsg-6) ... Setting up lighter (1.1.3-1) ... Setting up libodbccr2:amd64 (2.3.12-2) ... Setting up libiec61883-0:amd64 (1.2.0-7) ... Setting up libsaaj-java (1.4.0-4) ... Setting up raxml (8.2.13+dfsg-2) ... Setting up libgflags2.2 (2.2.2-2) ... Setting up gdal-plugins:amd64 (3.10.2+dfsg-1+b4) ... Setting up libgclib3:amd64 (0.12.7+ds-6) ... Setting up libserd-0-0:amd64 (0.32.4-1) ... Setting up sickle (1.33+git20150314.f3d6ae3-2) ... Setting up libwacom-common (2.14.0-1) ... Setting up clearcut (1.0.9+git20211013.b799afe-1) ... Setting up lastz (1.04.22-2) ... Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... Setting up libterraces0 (0.0+git20200413.8af2e4c+dfsg-3) ... Setting up libxkbcommon0:amd64 (1.7.0-2) ... Setting up libpotrace0:amd64 (1.16-2+b2) ... Setting up libnaga-java (3.0+svn80-5) ... Setting up libbpp-seq12t64:amd64 (2.4.1-13) ... Setting up ncbi-epcr (2.3.12-1-10) ... Setting up libwayland-client0:amd64 (1.23.1-3) ... Setting up libctf0:amd64 (2.44-3) ... Setting up libpython3.13:amd64 (3.13.2-2) ... Setting up profnet-con (1.0.22-8) ... Setting up libksba8:amd64 (1.6.7-2+b1) ... Setting up pinentry-curses (1.3.1-2) ... Setting up libdom4j-java (2.1.4-1) ... Setting up libjaxb-api-java (2.3.1-1) ... Setting up x11proto-dev (2024.1-1) ... Setting up libavc1394-0:amd64 (0.5.4-5+b2) ... Setting up teckit (2.5.12+ds1-1+b1) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2+b1) ... Setting up libwagon-provider-api-java (3.5.3-1) ... Setting up libcommons-dbcp-java (1.4-8) ... Setting up libjlapack-java (0.8~dfsg-6) ... Setting up gnuplot-data (6.0.2+dfsg1-1) ... Setting up saint (2.5.0+dfsg-4+b3) ... Setting up libllvm19:amd64 (1:19.1.7-3) ... Setting up smalt (0.7.6-13) ... Setting up libwayland-server0:amd64 (1.23.1-3) ... Setting up pscan-chip (1.1-3+b3) ... Setting up libaprutil1t64:amd64 (1.6.3-3+b1) ... Setting up manpages-dev (6.9.1-1) ... Setting up libx11-xcb1:amd64 (2:1.8.12-1) ... Setting up libmysql++3t64:amd64 (3.2.5-2.3+b1) ... Setting up libre2-11:amd64 (20240702-3+b1) ... Setting up gromacs-data (2025.1-1) ... Setting up libxstream-java (1.4.21-1) ... Setting up fonts-dejavu (2.37-8) ... Setting up libodbcinst2:amd64 (2.3.12-2) ... Setting up libavif16:amd64 (1.2.1-1) ... Setting up tree-puzzle (5.3~rc16+dfsg-12+b1) ... Setting up libhpdf-2.3.0:amd64 (2.3.0+dfsg-1+b3) ... Setting up tcl8.6 (8.6.16+dfsg-1) ... Setting up liblapack3:amd64 (3.12.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gff2ps (0.98l-6) ... Setting up libudunits2-0 (2.2.28-7) ... Setting up gffread (0.12.7-8) ... Setting up libgsl-dev (2.8+dfsg-5) ... Setting up libarpack2t64:amd64 (3.9.1-4) ... Setting up libjetty9-java (9.4.57-1) ... Setting up vim (2:9.1.1113-1) ... update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/editor (editor) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/ex (ex) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/rview (rview) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/rvim (rvim) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/vi (vi) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/view (view) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/vim (vim) in auto mode update-alternatives: using /usr/bin/vim.basic to provide /usr/bin/vimdiff (vimdiff) in auto mode Setting up libxdamage1:amd64 (1:1.1.6-1+b2) ... Setting up node-d3-format (1:1.4.5+~1.4.2-2) ... Setting up libopenblas0-pthread:amd64 (0.3.29+ds-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up libopenni2-0:amd64 (2.2.0.33+dfsg-18+b2) ... Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-3) ... Setting up gpg-agent (2.2.46-5) ... Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket' → '/usr/lib/systemd/user/gpg-agent-browser.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket' → '/usr/lib/systemd/user/gpg-agent-extra.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket' → '/usr/lib/systemd/user/gpg-agent-ssh.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent.socket' → '/usr/lib/systemd/user/gpg-agent.socket'. Setting up java-wrappers (0.5) ... Setting up libamd3:amd64 (1:7.10.1+dfsg-1) ... Setting up libssm2:amd64 (1.4.0-2+b3) ... Setting up libpdfbox-java (1:1.8.16-5) ... Setting up libxau-dev:amd64 (1:1.0.11-1) ... Setting up clonalorigin (1.0-8+b1) ... Setting up libjxr-tools (1.2~git20170615.f752187-5.3) ... Setting up libcaca0:amd64 (0.99.beta20-5) ... Setting up sumatra (1.0.36+ds-2) ... Setting up libxpm4:amd64 (1:3.5.17-1+b3) ... Setting up libv4lconvert0t64:amd64 (1.28.1-1) ... Setting up libjersey1-client-java (1.19.3-8) ... Setting up libzvbi0t64:amd64 (0.2.44-1) ... Setting up libstringtemplate4-java (4.3.3-1) ... Setting up libplexus-languages-java (1.1.1-2) ... Setting up garlic (1.6-3+b1) ... Setting up nettle-dev:amd64 (3.10.1-1) ... Setting up libjgrapht0.8-java (0.8.3-7) ... Setting up kraken (1.1.1-4) ... Setting up libwoff1:amd64 (1.0.2-2+b2) ... Setting up libclc-19 (1:19.1.7-3) ... Setting up proftmb (1.1.12-11+b1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b4) ... Setting up libmstoolkit82t64 (82-7.2) ... Setting up jarwrapper (0.80) ... Setting up libice-dev:amd64 (2:1.1.1-1) ... Setting up phybin (0.3-6) ... Setting up dictionaries-common (1.30.10) ... Setting up libpng-tools (1.6.47-1.1) ... Setting up alsa-ucm-conf (1.2.13-2) ... Setting up transrate-tools (1.0.0-5) ... Setting up libcolamd3:amd64 (1:7.10.1+dfsg-1) ... Setting up python3.13 (3.13.2-2) ... Setting up libcglib-java (3.3.0-1) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up fontconfig-config (2.15.0-2.2) ... Setting up node-d3-time-format (2.3.0+~2.3.1-1) ... Setting up aevol (5.0+ds-4) ... Setting up libjs-scriptaculous (1.9.0-4) ... Setting up libjdom1-java (1.1.3-3) ... Setting up libstax-ex-java (1.7.8-3) ... Setting up glam2 (1064-10) ... Setting up kmerresistance (2.2.0-4) ... Setting up libxerial-sqlite-jdbc-java (3.46.1.3+dfsg-1) ... Setting up libwebpdemux2:amd64 (1.5.0-0.1) ... Setting up libbpp-phyl12t64:amd64 (2.4.1-11+b2) ... Setting up terraphast (0.0+git20200413.8af2e4c+dfsg-3) ... Setting up libmaven-parent-java (43-2) ... Setting up libllvmspirvlib19.1:amd64 (19.1.3-1) ... Setting up gpgsm (2.2.46-5) ... Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Setting up libcommons-parent-java (56-1) ... Setting up node-d3-chord (1.0.6+~1.0.11-1) ... Setting up libaec-dev:amd64 (1.1.3-1+b1) ... Setting up profphd-utils (1.0.10-7) ... Setting up libdjvulibre21:amd64 (3.5.28-2+b2) ... Setting up libavahi-common3:amd64 (0.8-16) ... Setting up pplacer (1.1~alpha19-8+b1) ... Setting up profnet-md (1.0.22-8) ... Setting up ssw-align (1.1-15+b2) ... Setting up libcommons-logging-java (1.3.0-1) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up ncl-tools (2.1.21+git20210811.b1213a7-6) ... Setting up fastahack (1.0.0+dfsg-11+b2) ... Setting up libsisu-inject-java (0.3.5-1) ... Setting up libmems1t64:amd64 (1.6.0+4725-11+b1) ... Setting up libobjc4:amd64 (14.2.0-19) ... Setting up clonalframe (1.2-11+b3) ... Setting up python3 (3.13.2-2) ... Setting up libcifpp7:amd64 (7.0.9-1) ... Setting up python3-cigar (0.1.3-2) ... Setting up libidn2-0:amd64 (2.3.8-2) ... Setting up libsource-highlight4t64:amd64 (3.1.9-4.3+b1) ... Setting up libnss3:amd64 (2:3.109-1) ... Setting up libopenal1:amd64 (1:1.24.2-1) ... Setting up libciftools-java (6.0.0-1) ... Setting up dbus-daemon (1.16.2-2) ... Setting up python3-sortedcontainers (2.4.0-2) ... Setting up libpaper-utils (2.2.5-0.3+b1) ... Setting up clustalo (1.2.4-8) ... Setting up simkamin (1.5.3-8) ... Setting up libaprutil1-ldap:amd64 (1.6.3-3+b1) ... Setting up libngtcp2-dev:amd64 (1.11.0-1) ... Setting up tm-align (20190822+dfsg-3) ... Setting up libbpp-popgen8t64:amd64 (2.4.1-11+b2) ... Setting up libxom-java (1.3.9-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-click (8.2.0+0.really.8.1.8-1) ... Setting up art-nextgen-simulation-tools (20160605+dfsg-5+b1) ... Setting up dssp (4.4.10-1) ... Setting up libjaxws-api-java (2.3.0-1.1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up biosquid (1.9g+cvs20050121-15.1+b2) ... Setting up sambamba (1.0.1+dfsg-2) ... Setting up node-d3-shape (1.3.7+~1.3.8-1) ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.6.3-3+b1) ... Setting up libonnxruntime1.21:amd64 (1.21.0+dfsg-1) ... Setting up python3-markupsafe (2.1.5-1+b3) ... Setting up python3-astropy-iers-data (0.2025.1.6.0.33.42-1) ... Setting up libcommons-lang-java (2.6-10) ... Setting up python3-wheel (0.45.1-1) ... Setting up python3-webencodings (0.5.1-5) ... Setting up python3-simpleeval (1.0.3-1) ... Setting up python3-ujson:amd64 (5.10.0-1+b4) ... Setting up python3-plac (1.4.3-2) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-psutil (7.0.0-1) ... Setting up libgbtools0t64:amd64 (4.44.1+dfsg-7.1+b3) ... Setting up python3-multidict (6.1.0-1+b2) ... Setting up libjackson2-databind-java (2.14.0+ds-1) ... Setting up libcamd3:amd64 (1:7.10.1+dfsg-1) ... Setting up libsuperlu7:amd64 (7.0.0+dfsg1-2) ... Setting up python3-natsort (8.0.2-2) ... Setting up last-align (1609-1) ... Setting up libplexus-cipher-java (2.0-1) ... Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b4) ... Setting up python3-frozenlist (1.5.0-1+b2) ... Setting up python3-aiosignal (1.3.2-1) ... Setting up python3-uritemplate (4.1.1-3) ... Setting up libtbbbind-2-5:amd64 (2022.0.0-2) ... Setting up libnl-route-3-200:amd64 (3.7.0-2) ... Setting up python3-ratelimiter (1.2.0.post0-4) ... Setting up libmaeparser1:amd64 (1.3.1-1+b2) ... Setting up profnet-isis (1.0.22-8) ... Setting up axe-demultiplexer (0.3.3+dfsg-4+b1) ... Setting up python3-fs (2.4.16-7) ... Setting up python3-cykhash (2.0.0-3+b3) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b2) ... Setting up fuse3 (3.17.1~rc1-3) ... Removing 'diversion of /bin/fusermount to /bin/fusermount.usr-is-merged by fuse3' Removing 'diversion of /sbin/mount.fuse to /sbin/mount.fuse.usr-is-merged by fuse3' Setting up python3-prefixed (0.7.0-1) ... Setting up librist4:amd64 (0.2.11+dfsg-1) ... Setting up python3-async-timeout (5.0.1-1) ... Setting up libkmldom1t64:amd64 (1.3.0-12+b2) ... Setting up libcastor-core-java (1.3.2-7) ... Setting up wigeon (20101212+dfsg1-6) ... Setting up python3-six (1.17.0-1) ... Setting up python3-bson (4.10.1-5) ... Setting up python3-simplejson (3.19.3-1+b2) ... Setting up igor (1.4.0+dfsg-5+b1) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up coinor-libcoinutils3v5:amd64 (2.11.11+ds-5) ... Setting up cdbfasta (1.00+git20230710.da8f5ba+dfsg-1) ... Setting up libperl5.40:amd64 (5.40.1-2) ... Setting up python3-isodate (0.7.0-1) ... Setting up libthai0:amd64 (0.1.29-2+b1) ... Setting up nast-ier (20101212+dfsg1-6) ... Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. Setting up libsisu-plexus-java (0.3.5-1) ... Setting up libvorbisfile3:amd64 (1.3.7-2+b1) ... Setting up libxdmcp-dev:amd64 (1:1.1.5-1) ... Setting up python3-roman (5.0-1) ... Setting up node-d3-drag (1.2.5+~1.2.5-1) ... Setting up fsm-lite (1.0-8) ... Setting up jags (4.3.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-fqdn (1.5.1-2) ... Setting up node-iconv-lite (0.6.3-3) ... Setting up perl (5.40.1-2) ... Setting up libpackage-stash-xs-perl:amd64 (0.30-1+b4) ... Setting up python3-jinja2 (3.1.5-2) ... Setting up python3-pygtrie (2.2-3) ... Setting up python3-pygments (2.18.0+dfsg-2) ... Setting up phylonium (1.7-3) ... Setting up libglib2.0-0t64:amd64 (2.84.0-2) ... Setting up python3-xopen (1.7.0-3) ... Setting up libsecret-1-0:amd64 (0.21.6-3) ... Setting up libgprofng0:amd64 (2.44-3) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up python3-webcolors (1.13-1) ... Setting up python3-packaging (24.2-1) ... Setting up libjavascriptcoregtk-4.1-0:amd64 (2.48.0-1+b1) ... Setting up tophat-recondition (1.4-3) ... Setting up python3-iso8601 (2.1.0-2) ... Setting up libmbedx509-7:amd64 (3.6.2-3) ... Setting up profphd-net (1.0.22-8) ... Setting up libtmglib3:amd64 (3.12.1-2) ... Setting up libalgorithm-c3-perl (0.11-2) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-configobj (5.0.9-1) ... Setting up libset-object-perl (1.42-1+b5) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libptexenc1:amd64 (2024.20240313.70630+ds-6) ... Setting up liblog-log4perl-perl (1.57-1) ... Setting up libllvm17t64:amd64 (1:17.0.6-21+b1) ... Setting up libqrtr-glib0:amd64 (1.2.2-1+b2) ... Setting up libclass-tiny-perl (1.008-2) ... Setting up pandoc (3.1.11.1+ds-2) ... Setting up python3-wcwidth (0.2.13+dfsg1-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up progressivemauve (1.2.0+4713+dfsg-5+b3) ... Setting up python3-pyu2f (0.1.5-4) ... Setting up fastani (1.33-3+b1) ... Setting up python3-humanfriendly (10.0-6) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libdata-dump-perl (1.25-1) ... Setting up python3-certifi (2025.1.31+ds-1) ... Setting up covtobed (1.3.5+dfsg-2) ... Setting up mcl (1:22-282+ds-4) ... Setting up libstring-crc32-perl (2.100-2+b3) ... Setting up profnet-bval (1.0.22-8) ... Setting up profnet-chop (1.0.22-8) ... Setting up python3-isal (1.7.1-1+b2) ... Setting up python3-spython (0.3.13-2) ... Setting up libglpk40:amd64 (5.0-1+b2) ... Setting up lib32gcc-s1 (14.2.0-19) ... Setting up lib32stdc++6 (14.2.0-19) ... Setting up python3-typeshed (0.0~git20241223.ea91db2-1) ... Setting up libfile-find-rule-perl (0.34-3) ... Setting up metaeuk (7-bba0d80+ds-1+b1) ... Setting up libref-util-perl (0.204-2) ... Setting up ssl-cert (1.1.3) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b4) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up python3-avro (1.12.0+dfsg-1) ... Setting up python3-werkzeug (3.1.3-2) ... Setting up libxml-xpathengine-perl (0.14-2) ... Setting up libcastor-xml-java (1.3.2-7) ... Setting up profnet-norsnet (1.0.22-8) ... Setting up libperlio-utf8-strict-perl (0.010-1+b3) ... Setting up libldap-dev:amd64 (2.6.9+dfsg-2) ... Setting up python3-jmespath (1.0.1-1) ... Setting up libsvmloc0:amd64 (1.0+dfsg-7) ... Setting up python3-dill (0.3.9-1) ... Setting up python3-brotli (1.1.0-2+b7) ... Setting up libjs-jquery-metadata (12-4) ... Setting up libxml-writer-perl (0.900-2) ... Setting up gnustep-base-common (1.31.1-2) ... Setting up bppsuite (2.4.1-7) ... Setting up dbus (1.16.2-2) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libio-compress-brotli-perl (0.004001-2+b3) ... Setting up python3-mdurl (0.1.2-1) ... Setting up libenv-path-perl (0.19-4) ... Setting up libopenexr-3-1-30:amd64 (3.1.13-2) ... Setting up node-d3-scale (2.2.2+~2.2.6-1) ... Setting up python3-rfc3987 (1.3.8-3) ... Setting up python3-greenlet (3.1.0-1+b2) ... Setting up shared-mime-info (2.4-5+b2) ... Setting up python3-cycler (0.12.1-1) ... Setting up python-odf-doc (1.4.2-4) ... Setting up libp11-kit0:amd64 (0.25.5-3) ... Setting up libxinerama1:amd64 (2:1.1.4-3+b3) ... Setting up python3-dpath (2.2.0-1) ... Setting up dnarrange (1.5.3-1.1) ... Setting up python3-connection-pool (0.0.3-2) ... Setting up libdata-dumper-simple-perl (0.11-7) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2+b2) ... Setting up mlv-smile (1.47-8) ... Setting up libplacebo349:amd64 (7.349.0-3) ... Setting up libemail-date-format-perl (1.008-1) ... Setting up racon (1.5.0-3) ... Setting up libxkbcommon-x11-0:amd64 (1.7.0-2) ... Setting up libcrypt-rc4-perl (2.02-5) ... Setting up libdc1394-25:amd64 (2.2.6-4+b2) ... Setting up libxv1:amd64 (2:1.0.11-1.1+b3) ... Setting up python3-rfc3986-validator (0.1.1-2) ... Setting up python3-kiwisolver (1.4.7-3+b1) ... Setting up liblapack-dev:amd64 (3.12.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up python3-bson-ext:amd64 (4.10.1-5+b1) ... Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... Setting up libstreambuffer-java (1.5.4-1.1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-5) ... Setting up libvariable-magic-perl (0.64-1+b1) ... Setting up python3-setproctitle:amd64 (1.3.5-1) ... Setting up udev (257.4-3) ... Creating group 'input' with GID 995. Creating group 'sgx' with GID 994. Creating group 'kvm' with GID 993. Creating group 'render' with GID 992. Setting up libj2ssh-java (0.2.9-6) ... Setting up python3-idna (3.10-1) ... Setting up libio-html-perl (1.004-3) ... Setting up python3-wrapt (1.15.0-4+b1) ... Setting up python3-markdown (3.7-2) ... Setting up python3-throttler (1.2.2-2) ... Setting up libxrandr2:amd64 (2:1.5.4-1+b3) ... Setting up libcommons-collections4-java (4.4-2) ... Setting up libpod-parser-perl (1.67-1) ... Setting up cython3 (3.0.11+dfsg-2+b1) ... Setting up python3-h11 (0.14.0-1) ... Setting up mash (2.3+dfsg-6+b2) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-3+b2) ... Setting up libfile-grep-perl (0.02-3) ... Setting up icu-devtools (76.1-3) ... Setting up cpp-14-x86-64-linux-gnu (14.2.0-19) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up libmath-vecstat-perl (0.08-3) ... Setting up liblist-moreutils-xs-perl (0.430-4+b2) ... Setting up ucf (3.0050) ... Setting up libjswingreader-java (0.3-4) ... Setting up gir1.2-glib-2.0:amd64 (2.84.0-2) ... Setting up python3-aiohappyeyeballs (2.6.1-1) ... Setting up libcommons-discovery-java (0.5-4) ... Setting up aspell (0.60.8.1-4) ... Setting up libmath-derivative-perl (1.01-3) ... Setting up netpbm (2:11.09.03-1) ... Setting up python3-regex (0.1.20241106-1+b1) ... Setting up python3-cpuinfo (9.0.0+git20221119-3) ... Setting up python3-html5lib (1.2-1) ... Setting up python3-numpy (1:2.2.3+ds-5) ... Setting up libidn2-dev:amd64 (2.3.8-2) ... Setting up pscan-tfbs (1.2.2-4+b3) ... Setting up libjs-sphinxdoc (8.1.3-5) ... Setting up node-d3-force (2.1.1+~2.1.4-1) ... Setting up coinor-libosi1v5:amd64 (0.108.10+ds-2) ... Setting up libparams-util-perl (1.102-3+b1) ... Setting up libcommons-lang3-java (3.17.0-1) ... Setting up libdpkg-perl (1.22.18) ... Setting up libspiffy-perl (0.46-1) ... Setting up libssh-4:amd64 (0.11.1-1) ... Setting up pinfish (0.1.0+ds-4+b5) ... Setting up cpp-14 (14.2.0-19) ... Setting up python3-isort (6.0.1-1) ... Setting up node-d3-contour (1.3.2+~1.3.3-1) ... Setting up python3-urllib3 (2.3.0-2) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up python3-pluggy (1.5.0-1) ... Setting up libhdf4-0-alt:amd64 (4.3.0-1+b1) ... Setting up libccolamd3:amd64 (1:7.10.1+dfsg-1) ... Setting up libcapture-tiny-perl (0.50-1) ... Setting up librubberband2:amd64 (3.3.0+dfsg-2+b3) ... Setting up libmbedtls21:amd64 (3.6.2-3) ... Setting up libmath-round-perl (0.08-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up libset-scalar-perl (1.29-3) ... Setting up norsp (1.0.6-7) ... Setting up libv4l-0t64:amd64 (1.28.1-1) ... Setting up python3-rpds-py (0.21.0-2+b1) ... Setting up python3-fastjsonschema (2.21.1-1) ... Setting up python3-legacy-cgi (2.6.2-1) ... Setting up libsub-name-perl:amd64 (0.28-1) ... Setting up libtype-tiny-xs-perl:amd64 (0.025-2+b1) ... Setting up sumaclust (1.0.36+ds-4) ... Setting up libtamuanova-0.2 (0.2-5+b3) ... Setting up python3-pyqt5.sip (12.17.0-1+b1) ... Setting up bedops (2.4.41+dfsg-3) ... Setting up libclang-rt-19-dev:amd64 (1:19.1.7-3) ... Setting up librngom-java (2.3.0.1-11) ... Setting up libspandsp2t64:amd64 (0.0.6+dfsg-2.2) ... Setting up xdg-dbus-proxy (0.1.6-1) ... Setting up python3-pubsub (4.0.3-7) ... Setting up libjack-jackd2-0:amd64 (1.9.22~dfsg-4) ... Setting up libgvpr2:amd64 (2.42.4-3) ... Setting up idba (1.1.3-8) ... Setting up libgetopt-euclid-perl (0.4.8-1) ... Setting up libdrm2:amd64 (2.4.124-1) ... Setting up libjni-inchi-jni (0.8+dfsg-8) ... Setting up libmath-cephes-perl (0.5306-1) ... Setting up patman (1.2.2+dfsg-8+b1) ... Setting up libjansi-native-java (1.8-2) ... Setting up python3-jupyterlab-widgets (8.1.5-6) ... Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... Setting up libparse-recdescent-perl (1.967015+dfsg-4) ... Setting up hisat2 (2.2.1-5+b2) ... Setting up python3-hdmedians (0.14.2-6+b1) ... Setting up libfreecontact0t64:amd64 (1.0.21-14) ... Setting up libfreexl1:amd64 (2.0.0-1+b3) ... Setting up libfile-chdir-perl (0.1008-1.2) ... Setting up liblqr-1-0:amd64 (0.4.2-2.1+b2) ... Setting up libva-drm2:amd64 (2.22.0-3) ... Setting up libopenblas0:amd64 (0.3.29+ds-3) ... Setting up node-d3-brush (1.1.6+~1.1.5-1) ... Setting up python3-astroid (3.3.8-2) ... Setting up snp-sites (2.5.1-2+b2) ... Setting up xauth (1:1.1.2-1.1) ... Setting up libmm-glib0:amd64 (1.23.95-2) ... Setting up groff-base (1.23.0-7) ... Setting up python3-json-pointer (2.4-3) ... Setting up rapmap (0.15.0+dfsg-4+b2) ... Setting up python3-dnspython (2.7.0-1) ... Setting up libvdpau1:amd64 (1.5-3+b1) ... Setting up libmime-charset-perl (1.013.1-2) ... Setting up python3-rdflib (7.1.1-2) ... Setting up libsord-0-0:amd64 (0.16.18-1) ... Setting up python-biopython-doc (1.85+dfsg-2) ... Setting up liblapacke:amd64 (3.12.1-2) ... Setting up ngmlr (0.2.7+git20210816.a2a31fb+dfsg-2+b1) ... Setting up libwayland-cursor0:amd64 (1.23.1-3) ... Setting up xml-core (0.19) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up hunspell-en-gb (1:25.2.1-4) ... Setting up python3-portalocker (2.2.1-1) ... Setting up libsratom-0-0:amd64 (0.6.18-1) ... Setting up libpath-tiny-perl (0.146-1) ... Setting up tcl (8.6.16) ... Setting up source-highlight (3.1.9-4.3+b1) ... Setting up libnl-genl-3-200:amd64 (3.7.0-2) ... Setting up libjson-perl (4.10000-1) ... Setting up libxslt1.1:amd64 (1.1.35-1.2) ... Setting up biosyntax-vim (1.0.0b-6) ... Setting up mummer (3.23+dfsg-8) ... Setting up python3-et-xmlfile (2.0.0-1) ... Setting up hmmer2 (2.3.2+dfsg-12+b2) ... Setting up libtext-format-perl (0.63-1) ... Setting up libswiss-perl (1.80-1) ... Setting up python3-pyasn1 (0.6.1-1) ... Setting up hunspell-en-us (1:2020.12.07-4) ... Setting up libpam-systemd:amd64 (257.4-3) ... Setting up libalgorithm-svm-perl (0.13-4+b2) ... Setting up hmmer (3.4+dfsg-2) ... Setting up libcarp-always-perl (0.16-1) ... Setting up libdecor-0-0:amd64 (0.2.2-2) ... Setting up libcommons-beanutils-java (1.9.4-2) ... Setting up libjansi1-java (1.18-3.1) ... Setting up libfcgi-perl (0.82+ds-3+b2) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up libplexus-sec-dispatcher-java (2.0-3) ... Setting up libc6-dev:amd64 (2.41-6) ... Setting up python3-toolz (1.0.0-2) ... Setting up libharfbuzz0b:amd64 (10.2.0-1+b1) ... Setting up plink2 (2.00~a6.9-250129+dfsg-1) ... Setting up python3-dateutil (2.9.0-4) ... Setting up libgirepository-1.0-1:amd64 (1.84.0-1) ... Setting up libcarp-clan-perl (6.08-2) ... Setting up theseus (3.3.0-14+b1) ... Setting up libdevel-globaldestruction-perl (0.14-4) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-2) ... Setting up libdsdp-5.8t64 (5.8-10.1) ... Setting up libavahi-glib1:amd64 (0.8-16) ... Setting up python3-contourpy (1.3.1-1+b1) ... Setting up python3-mccabe (0.7.0-1) ... Setting up libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2+b1) ... Setting up python3-py2bit (0.3.3-1+b1) ... Setting up libarmadillo14 (1:14.2.3+dfsg-1+b1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up python3-msgpack (1.0.3-3+b4) ... Setting up grabix (0.1.7-5) ... Setting up libclass-xsaccessor-perl (1.19-4+b5) ... Setting up libsnappy-java (1.1.10.7-1) ... Setting up libgraphics-colornames-perl (3.5.0-3.1) ... Setting up libgpgme11t64:amd64 (1.24.2-1+b1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up spaln (3.0.2+dfsg-2+b1) ... Setting up libdevel-symdump-perl (2.18-5) ... Setting up libpwiz-tools (3.0.18342-4.1) ... Setting up usb-modeswitch (2.6.1-4+b2) ... Setting up libxss1:amd64 (1:1.2.3-1+b3) ... Setting up libfontconfig1:amd64 (2.15.0-2.2) ... Setting up cif-tools (1.0.12-4) ... Setting up libsndfile1:amd64 (1.2.2-2+b1) ... Setting up python3-bibtexparser (2.0.0b5+really1.4.3-1) ... Setting up andi (0.14-3+b1) ... Setting up python3-datrie:amd64 (0.8.2-5+b2) ... Setting up node-d3-dsv (1.2.0+~1.2.3-1) ... Setting up python3-multiprocess (0.70.17-1) ... Setting up python3-py-zipkin (1.2.8-2) ... Setting up libxsom-java (2.3.0.1-11) ... Setting up python3-pyasyncore (1.0.2-3) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up coot-data (1.1.14+dfsg-1) ... Setting up eigensoft (8.0.0+dfsg-2+b1) ... Setting up libcommons-configuration-java (1.10-7) ... Setting up libexporter-tiny-perl (1.006002-1) ... Setting up libgcc-14-dev:amd64 (14.2.0-19) ... Setting up libterm-readkey-perl (2.38-2+b4) ... Setting up python3-protobuf (3.21.12-10+b6) ... Setting up plasmidseeker:amd64 (1.3+dfsg-3+b1) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-tzlocal (5.3.1-1) ... Setting up python3-periodictable (2.0.2-1) ... Setting up libcommons-codec-java (1.18.0-1) ... Setting up python3-lzstring (1.0.4-3) ... Setting up libbluray2:amd64 (1:1.3.4-1+b2) ... Setting up libghmm1t64 (0.9~rc3-11) ... Setting up python3-argcomplete (3.5.3-1) ... Setting up libbpp-seq-omics3t64:amd64 (2.4.1-12) ... Setting up python3-pymongo (4.10.1-5) ... Setting up python3-humanize (4.12.1-1) ... Setting up python3-cssselect (1.3.0-1) ... Setting up libavahi-core7:amd64 (0.8-16) ... Setting up python3-prettytable (3.15.1-1) ... Setting up libva-x11-2:amd64 (2.22.0-3) ... Setting up python3-tomlkit (0.13.2-1) ... Setting up python3-pathspec (0.12.1-1) ... Setting up libgoogle-glog0v6t64 (0.6.0-2.1) ... Setting up gff2aplot (2.0-15) ... Setting up python3-dendropy (4.6.1-2) ... Setting up python3-coloredlogs (15.0.1-1) ... Setting up python3-pydash (8.0.3-3) ... Setting up libjline2-java (2.14.6-5) ... Setting up libmath-matrixreal-perl (2.13-2) ... Setting up libstdc++-14-dev:amd64 (14.2.0-19) ... Setting up mailcap (3.74) ... Setting up python3-pymongo-ext:amd64 (4.10.1-5+b1) ... Setting up python3-yarl (1.13.1-1+b2) ... Setting up python3-smmap (6.0.0-1) ... Setting up libguard-perl (1.023-2+b4) ... Setting up libpostscript-perl (0.06-3.1) ... Setting up plink1.9 (1.90~b7.7-241022-1) ... Setting up libarchive13t64:amd64 (3.7.4-1.1) ... Setting up libsys-hostname-long-perl (1.5-3) ... Setting up liblilv-0-0:amd64 (0.24.26-1) ... Setting up python3-mistune (3.0.2-2) ... Setting up libjenkins-json-java (2.4-jenkins-8+dfsg-1) ... Setting up librocksdb9.10 (9.10.0-1+b1) ... Setting up libicu-dev:amd64 (76.1-3) ... Setting up libsort-naturally-perl (1.03-4) ... Setting up sysstat (12.7.5-2) ... Creating config file /etc/default/sysstat with new version update-alternatives: using /usr/bin/sar.sysstat to provide /usr/bin/sar (sar) in auto mode Created symlink '/etc/systemd/system/sysstat.service.wants/sysstat-collect.timer' → '/usr/lib/systemd/system/sysstat-collect.timer'. Created symlink '/etc/systemd/system/sysstat.service.wants/sysstat-rotate.timer' → '/usr/lib/systemd/system/sysstat-rotate.timer'. Created symlink '/etc/systemd/system/sysstat.service.wants/sysstat-summary.timer' → '/usr/lib/systemd/system/sysstat-summary.timer'. Created symlink '/etc/systemd/system/multi-user.target.wants/sysstat.service' → '/usr/lib/systemd/system/sysstat.service'. Setting up python3-soupsieve (2.6-1) ... Setting up exonerate (2.4.0-5+b1) ... Setting up barrnap (0.9+dfsg-4) ... Setting up python3-statsmodels-lib:amd64 (0.14.4+dfsg-1+b4) ... Setting up python3-websocket (1.8.0-2) ... Setting up libinstpatch-1.0-2:amd64 (1.1.6-1+b2) ... Setting up libopenmpt0t64:amd64 (0.7.13-1+b1) ... Setting up libavahi-client3:amd64 (0.8-16) ... Setting up liburi-perl (5.30-1) ... Setting up python3-deprecated (1.2.18-1) ... Setting up libx11-protocol-perl (0.56-9) ... Setting up libgudev-1.0-0:amd64 (238-6) ... Setting up libpolkit-gobject-1-0:amd64 (126-2) ... Setting up python3-jupyter-core (5.7.2-5) ... Setting up libdbi-perl:amd64 (1.647-1) ... Setting up libmbim-glib4:amd64 (1.31.95-2) ... Setting up gmap (2024-11-20+ds-2) ... Setting up libdate-manip-perl (6.97-1) ... Setting up libgstreamer1.0-0:amd64 (1.26.0-1) ... Setcap worked! gst-ptp-helper is not suid! Setting up libp11-kit-dev:amd64 (0.25.5-3) ... Setting up libgraphene-1.0-0:amd64 (1.10.8-5) ... Setting up python3-asgiref (3.8.1-1) ... Setting up python3-cffi-backend:amd64 (1.17.1-2+b2) ... Setting up profbval (1.0.22-8) ... Setting up libfile-sort-perl (1.01-3) ... Setting up python3-edlib:amd64 (1.2.7-6+b3) ... Setting up salmid (0.1.23-5) ... Setting up libmath-vec-perl (1.01-5) ... Setting up python3-dnaio (1.2.3-1+b1) ... Setting up libclang-cpp19 (1:19.1.7-3) ... Setting up gnupg-utils (2.2.46-5) ... Setting up python3-imagesize (1.4.1-1) ... Setting up apache2-utils (2.4.63-1) ... Setting up binutils-x86-64-linux-gnu (2.44-3) ... Setting up python3-ptyprocess (0.7.0-6) ... Setting up python3-yapsy (1.12.2-3) ... Setting up libdrm-amdgpu1:amd64 (2.4.124-1) ... Setting up libtext-csv-perl (2.06-1) ... Setting up python3-uncertainties (3.2.2-1) ... Setting up libbz2-dev:amd64 (1.0.8-6) ... Setting up comet-ms (2019015+cleaned1-4.1) ... Setting up python3-blinker (1.9.0-1) ... Setting up python3-widgetsnbextension (8.1.5-6) ... Setting up libnet-ssleay-perl:amd64 (1.94-3) ... Setting up cpp-x86-64-linux-gnu (4:14.2.0-1) ... Setting up python3-dotenv (1.0.1-1) ... Setting up cd-hit (4.8.1-4) ... Setting up libmath-spline-perl (0.02-4) ... Setting up libgnutls30t64:amd64 (3.8.9-2) ... Setting up gir1.2-graphene-1.0:amd64 (1.10.8-5) ... Setting up python3-prompt-toolkit (3.0.50-1) ... Setting up libgfortran-14-dev:amd64 (14.2.0-19) ... Setting up libsaaj-ri-java (1.4.1-1.1) ... Setting up libarray-utils-perl (0.5-3) ... Setting up python3-toposort (1.10-2) ... Setting up libmodule-pluggable-perl (5.2-5) ... Setting up libanyevent-perl (7.170-2+b7) ... Setting up libjcode-pm-perl (2.06-1.1) ... Setting up sibelia (3.0.7+dfsg-3) ... Setting up python3-geneimpacts (0.3.7-5) ... Setting up libio-sessiondata-perl (1.03-3) ... Setting up python3-more-itertools (10.6.0-1) ... Setting up python3-schedule (1.2.2-1) ... Setting up python3-configargparse (1.7-2) ... Setting up python3-arcp (0.2.1-7) ... Setting up python3-httpcore (1.0.7-1) ... Setting up libgnutls-openssl27t64:amd64 (3.8.9-2) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up libnetlib-java (0.9.3-7) ... Setting up python3-sniffio (1.3.1-1) ... Setting up libberkeleydb-perl:amd64 (0.66-1) ... Setting up libbpp-phyl-omics3t64:amd64 (2.4.1-7+b1) ... Setting up python3-sympy (1.13.3-5) ... Setting up mesa-vulkan-drivers:amd64 (25.0.2-1) ... Setting up python3-orjson (3.10.7-2+b1) ... Setting up vcftools (0.1.16-3+b1) ... Setting up mesa-vdpau-drivers:amd64 (25.0.2-1) ... Setting up phast (1.7+dfsg-2) ... Setting up python3-attr (25.1.0-1) ... Setting up libstring-approx-perl (3.28-2+b5) ... Setting up python3-argh (0.31.3-1) ... Setting up libgpgmepp6t64:amd64 (1.24.2-1+b1) ... Setting up python3-elastic-transport (8.17.1-2) ... Setting up gtk-update-icon-cache (4.18.2+ds-1) ... Setting up libgts-bin (0.7.6+darcs121130-5.2+b1) ... Setting up libnghttp2-dev:amd64 (1.64.0-1) ... Setting up libqt6core6t64:amd64 (6.8.2+dfsg-5+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-slurper-perl (0.014-1) ... Setting up nxtrim (0.4.3+dfsg-4) ... Setting up ghmm (0.9~rc3-11) ... /usr/lib/python3/dist-packages/ghmm/modhmmer.py:185: SyntaxWarning: invalid escape sequence '\s' self.acc = gotoLine(f,re.compile("^NAME\s+([\w+\s*]+)" ) ).group(1) # NAME as unique model identifier Setting up python3-pyspoa (0.2.1-2+b1) ... Setting up iio-sensor-proxy (3.5-2) ... Setting up libfile-which-perl (1.27-2) ... Setting up libibverbs1:amd64 (56.0-3) ... Setting up fontconfig (2.15.0-2.2) ... Regenerating fonts cache... done. Setting up rtax (0.984-8) ... Setting up norsnet (1.0.17-7) ... Setting up python3-pure-eval (0.2.3-1) ... Setting up libcholmod5:amd64 (1:7.10.1+dfsg-1) ... Setting up libxft2:amd64 (2.3.6-1+b4) ... Setting up libboost1.83-dev:amd64 (1.83.0-4.1+b2) ... Setting up python3-filelock (3.17.0-1) ... Setting up libncurses-dev:amd64 (6.5+20250216-2) ... Setting up libneon27t64:amd64 (0.34.0-1) ... Setting up libxmu6:amd64 (2:1.1.3-3+b4) ... Setting up libfile-slurp-perl (9999.32-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up sigma-align (1.1.3-9) ... Setting up libtie-ixhash-perl (1.23-4) ... Setting up libfile-copy-link-perl (0.200-1) ... Setting up python3-ftputil (5.1.0-1) ... Setting up libconfig-general-perl (2.67-1) ... Setting up libtask-weaken-perl (1.06-2) ... Setting up libharfbuzz-icu0:amd64 (10.2.0-1+b1) ... Setting up libunicode-utf8-perl (0.62-2+b3) ... Setting up python3-propka (3.5.1-2) ... Setting up trace2dbest (3.0.1-2) ... Setting up libset-intspan-perl (1.19-3) ... Setting up python3-scipy (1.15.2-6) ... Setting up libxcb1-dev:amd64 (1.17.0-2+b1) ... Setting up libatk1.0-0t64:amd64 (2.56.0-3) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libzmq5:amd64 (4.3.5-1+b3) ... Setting up python3-importlib-metadata (8.6.1-1) ... Setting up python3-hisat2 (2.2.1-5) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up libparse-yapp-perl (1.21-4) ... Setting up python3-html5rdf (1.2.1-2) ... Setting up python3-smart-open (7.1.0-1) ... Setting up python3-distro (1.9.0-1) ... Setting up openjdk-21-jre-headless:amd64 (21.0.7~7ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libconvert-binary-c-perl (0.85-1+b1) ... Setting up porechop (0.2.4+dfsg-6) ... /usr/lib/python3/dist-packages/porechop/misc.py:261: SyntaxWarning: invalid escape sequence '\[' row_str = re.sub('\033\[4m', '', row_str) Setting up libpcre2-dev:amd64 (10.45-1) ... Setting up libxi6:amd64 (2:1.8.2-1) ... Setting up python3-intervaltree (3.0.2-1.1) ... Setting up python3-arrow (1.3.0-1.1) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up python3-tblib (3.0.0-6) ... Setting up libfont-afm-perl (1.20-4) ... Setting up bowtie (1.3.1-3) ... Setting up libwant-perl (0.29-2+b4) ... Setting up python3-py (1.11.0-4) ... Setting up libdynaloader-functions-perl (0.004-1) ... Setting up gir1.2-gdkpixbuf-2.0:amd64 (2.42.12+dfsg-2) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up libcassie1v5 (1.0.9-4+b1) ... Setting up libtest-deep-perl (1.204-1) ... Setting up python3-standard-pipes (3.13.0-5) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up python3-anyio (4.8.0-3) ... Setting up libxml-regexp-perl (0.04-1.1) ... Setting up libref-util-xs-perl (0.117-2+b4) ... Setting up cat-bat (5.3-2) ... Setting up python3-ijson (3.3.0-1+b2) ... Setting up python3-joblib (1.4.2-3) ... Setting up libalgorithm-munkres-perl (0.08-5) ... Setting up python3-parso (0.8.4-1) ... Setting up libtirpc3t64:amd64 (1.3.6+ds-1) ... Setting up python3-hyperframe (6.0.0-1) ... Setting up ibverbs-providers:amd64 (56.0-3) ... Setting up python3-hpack (4.0.0-2) ... Setting up perl-tk (1:804.036+dfsg1-4) ... Setting up python3-jwt (2.10.1-2) ... Setting up libio-pty-perl (1:1.20-1+b3) ... Setting up python3-cachetools (5.3.3-1) ... Setting up python3-asteval (1.0.6-2) ... Setting up libspqr4:amd64 (1:7.10.1+dfsg-1) ... Setting up libogdi4.1:amd64 (4.1.1+ds-5) ... Setting up python3-babel (2.17.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up libmime-types-perl (2.27-1) ... Setting up libpulse0:amd64 (17.0+dfsg1-2+b1) ... Setting up libfile-fcntllock-perl (0.22-4+b4) ... Setting up libenchant-2-2:amd64 (2.8.2+dfsg1-3) ... Setting up python3-deeptoolsintervals (0.1.9-3+b11) ... Setting up obitools (3.0.1~b26+dfsg-4) ... Setting up python3-colorama (0.4.6-4) ... Setting up python3-typechecks (0.1.0+ds-4) ... Setting up python3-memoized-property (1.0.3-2) ... Setting up python3-rich (13.9.4-1) ... Setting up libsombok3:amd64 (2.4.0-2+b2) ... Setting up python3-colorlog (6.9.0-1) ... Setting up python3-lz4 (4.4.0+dfsg-1+b1) ... Setting up python3-public (4.1.0-2) ... Setting up gir1.2-atk-1.0:amd64 (2.56.0-3) ... Setting up libwacom9:amd64 (2.14.0-1) ... Setting up python3-defusedxml (0.7.1-3) ... Setting up mafft (7.505-1) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libsub-identify-perl (0.14-3+b3) ... Setting up python3-asttokens (3.0.0-1) ... Setting up libgetopt-simple-perl (1.52-7) ... Setting up libcommons-io-java (2.18.0-1) ... Setting up physamp (1.1.0-5) ... Setting up python3-charset-normalizer (3.4.1-1+b1) ... Setting up libmaus2-2:amd64 (2.0.813+ds-4) ... Setting up iproute2 (6.13.0-1) ... Setting up python3-pika (1.3.2-1) ... Setting up python3-pytest (8.3.5-1) ... Setting up openssh-client (1:9.9p2-2) ... Setting up wise (2.4.1-25) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up libio-stringy-perl (2.113-2) ... Setting up python3-unicodedata2 (15.1.0+ds-1+b4) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up tortoize (2.0.13-1) ... Setting up libxtst6:amd64 (2:1.2.5-1) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libtest-file-perl (1.994-1) ... Setting up python3-mypy-extensions (1.0.0-1) ... Setting up node-d3-zoom (1.8.3+~1.8.4-1) ... Setting up python3-olefile (0.47-1) ... Setting up libauthen-sasl-perl (2.1700-1) ... Setting up libxmlb2:amd64 (0.3.22-1) ... Setting up python3-tenacity (8.4.2+really8.4.1-2) ... Setting up abacas (1.3.1-9) ... Setting up libmanette-0.2-0:amd64 (0.2.9-2) ... Setting up python3-bcrypt (4.2.0-2.1+b1) ... Setting up libtk8.6:amd64 (8.6.16-1) ... Setting up libdistlib-java (1.0-5) ... Setting up python3-pandas-lib:amd64 (2.2.3+dfsg-8+b1) ... Setting up libxcursor1:amd64 (1:1.2.3-1) ... Setting up python3-hypothesis (6.127.4-1) ... Setting up liblatex-tounicode-perl (0.55-1) ... Setting up libfile-slurp-tiny-perl (0.004-2) ... Setting up libipc-sharelite-perl (0.17-5+b3) ... Setting up libfilesys-df-perl (0.92-7+b4) ... Setting up python3-ply (3.11-9) ... Setting up python3-blessed (1.20.0-2) ... Setting up python3-pyinotify (0.9.6-5) ... Setting up libconvert-binhex-perl (1.125-3) ... Setting up libheap-perl (0.80-5) ... Setting up libpod-coverage-perl (0.23-2) ... Setting up python3-tqdm (4.67.1-3) ... Setting up libperl4-corelibs-perl (0.005-1) ... Setting up libpango-1.0-0:amd64 (1.56.3-1) ... Setting up libsrtp2-1:amd64 (2.5.0-3+b2) ... Setting up python3-typeguard (4.4.2-1) ... Setting up libdrm-intel1:amd64 (2.4.124-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up python3-rfc3339-validator (0.1.4-2) ... Setting up xsltproc (1.1.35-1.2) ... Setting up libyaml-libyaml-perl (0.903.0+ds-1) ... Setting up fasta3 (36.3.8i.14-Nov-2020-3) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up python3-ruamel.yaml.clib (0.2.12+ds-1+b1) ... Setting up cassiopee (1.0.9-4+b1) ... Setting up libtest-pod-perl (1.52-3) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libmupdf25.1 (1.25.1+ds1-5+b2) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libtype-tiny-perl (2.004000-1) ... Setting up aspell-en (2020.12.07-0-1) ... Setting up libncbi-vdb3:amd64 (3.0.9+dfsg-2) ... Setting up python3-pdbx (2.0.1-2) ... Setting up isympy-common (1.13.3-5) ... Setting up libpq5:amd64 (17.4-1+b1) ... Setting up libxxf86dga1:amd64 (2:1.1.5-1+b3) ... Setting up libx11-dev:amd64 (2:1.8.12-1) ... Setting up python3-aiohttp (3.10.11-1+b1) ... Setting up libcloudproviders0:amd64 (0.3.6-1+b1) ... Setting up python3-marshmallow (3.26.1-0.1) ... Setting up perl-doc (5.40.1-2) ... Setting up libgraphics-colorobject-perl (0.5.0-10.1) ... Setting up libcommon-sense-perl:amd64 (3.75-3+b5) ... Setting up libmldbm-perl (2.05-4) ... Setting up python3-sklearn-lib:amd64 (1.4.2+dfsg-8) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libsvg-perl (2.87-1) ... Setting up estscan (3.0.3-6) ... Setting up libzbar0t64:amd64 (0.23.93-7) ... Setting up python3-tabulate (0.9.0-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up enchant-2 (2.8.2+dfsg1-3) ... Setting up libanyevent-http-perl (2.25-2) ... Setting up python3-isoduration (20.11.0+git20211126.ae0bd61-2) ... Setting up python3-itsdangerous (2.2.0-2) ... Setting up python3-all (3.13.2-2) ... Setting up libbsd-resource-perl (1.2911-2+b4) ... Setting up python3-coverage (7.6.0+dfsg1-2+b2) ... Setting up python3-yaml (6.0.2-1+b2) ... Setting up libclass-singleton-perl (1.6-2) ... Setting up python3-mappy (2.27+dfsg-1+b3) ... Setting up libgstreamer-plugins-base1.0-0:amd64 (1.26.0-1) ... Setting up libpadwalker-perl (2.5-1+b6) ... Setting up libencode-locale-perl (1.05-3) ... Setting up node-d3-fetch (1.2.0+~1.2.2-1) ... Setting up any2fasta (0.4.2-2) ... Setting up python3-pytz (2025.1-3) ... Setting up python3-pytest-cov (5.0.0-1) ... Setting up libxmlgraphics-commons-java (2.10-2) ... Setting up libdbd-pg-perl (3.18.0-1+b3) ... Setting up libtext-csv-xs-perl:amd64 (1.60-1) ... Setting up libipc-shareable-perl (1.13-1) ... Setting up rdp-classifier-doc (2.10.2-7) ... Setting up skesa (2.4.0-6+b2) ... Setting up libtbb12:amd64 (2022.0.0-2) ... Setting up rubygems-integration (1.19) ... Setting up fsa (1.15.9+dfsg-6) ... Setting up libvamsas-client-java (0.2+dfsg-2) ... Setting up libnumber-format-perl (1.76-1) ... Setting up libgedit-gfls-1-0:amd64 (0.3.0-1) ... Setting up predictnls (1.0.20-8) ... Setting up python3-tifffile (20250313-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libfindbin-libs-perl (3.0.2-1) ... Setting up libharfbuzz-gobject0:amd64 (10.2.0-1+b1) ... Setting up hhsuite (3.3.0+ds-8+b2) ... Setting up gemma (0.98.5+dfsg-3) ... Setting up libai-fann-perl (0.10-5+b7) ... Setting up binutils (2.44-3) ... Setting up libmbim-proxy (1.31.95-2) ... Setting up libkmlengine1t64:amd64 (1.3.0-12+b2) ... Setting up libxaw7:amd64 (2:1.0.16-1) ... Setting up python3-gitdb (4.0.11-1) ... Setting up libio-all-perl (0.87-2) ... Setting up libclass-c3-perl (0.35-2) ... Setting up black (25.1.0-2) ... Setting up libreadline-dev:amd64 (8.2-6) ... Setting up python3-serializable (0.4.1+ds-2) ... Setting up libxstring-perl:amd64 (0.005-2+b4) ... Setting up libgraph-perl (1:0.9734-1) ... Setting up python3-multipletau (0.4.1+ds-1) ... Setting up node-d3 (5.16.0+~cs5.28.10-2) ... Setting up python3-freetype (2.5.1-1) ... Setting up xfonts-utils (1:7.7+7) ... Setting up mupdf-tools (1.25.1+ds1-5+b2) ... Setting up python3-pytest-arraydiff (0.6.1-3) ... Setting up libhwloc-plugins:amd64 (2.12.0-1) ... Setting up profisis (1.0.11-7) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Setting up man-db (2.13.0-1) ... Building database of manual pages ... Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' → '/usr/lib/systemd/system/man-db.timer'. Setting up sortmerna (4.3.7-2+b2) ... Setting up libyaml-perl (1.31-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up python3-parasail (1.3.3-1) ... Setting up libavutil59:amd64 (7:7.1.1-1+b1) ... Setting up lamassemble (1.7.2-2) ... Setting up libclass-c3-xs-perl (0.15-1+b6) ... Setting up libcairo2:amd64 (1.18.4-1+b1) ... Setting up python3-ldap3 (2.9.1-2) ... Setting up python3.13-tk (3.13.2-2) ... Setting up libregexp-common-perl (2024080801-1) ... Setting up libmath-bezier-perl (0.01-4) ... Setting up samclip (0.4.0-4) ... Setting up libspreadsheet-writeexcel-perl (2.40-4) ... Setting up libcolord2:amd64 (1.4.7-3) ... Setting up libdevel-caller-perl:amd64 (2.07-1+b3) ... Setting up biosyntax-less (1.0.0b-6) ... Setting up libmath-random-mt-perl (1.17-2+b4) ... Setting up python3-tz (2025.1-3) ... Setting up python3-bs4 (4.13.3-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up libtest2-suite-perl (0.000163-1) ... Setting up python3-sqlalchemy (2.0.32+ds1-1) ... Setting up dpkg-dev (1.22.18) ... Setting up biobambam2 (2.0.185+ds-2) ... Setting up libjson-glib-1.0-0:amd64 (1.10.6+ds-2) ... Setting up libpsl-dev:amd64 (0.21.2-1.1+b1) ... Setting up libbit-vector-perl:amd64 (7.4-3+b3) ... Setting up libdata-compare-perl (1.29-1) ... Setting up bowtie2 (2.5.4-1+b1) ... Setting up libinput-bin (1.27.1-1) ... Setting up bali-phy (4.0-1) ... Setting up libfreezethaw-perl (0.5001-3) ... Setting up python3-matplotlib-inline (0.1.7-1) ... Setting up python3-comm (0.2.1-1) ... Setting up libpostproc58:amd64 (7:7.1.1-1+b1) ... Setting up python3-yte (1.5.4-1) ... Setting up sspace (2.1.1+dfsg-7) ... Setting up libmpj-java (0.44+dfsg-4) ... Setting up bolt-lmm (2.4.1+dfsg-2) ... Setting up liberror-perl (0.17030-1) ... Setting up libdconf1:amd64 (0.40.0-5) ... Setting up python3-flufl.lock (8.1.0-2) ... Setting up ncbi-blast+ (2.16.0+ds-6+b1) ... Setting up libncbi6t64:amd64 (6.1.20170106+dfsg2-5) ... Setting up libdigest-perl-md5-perl (1.9-5) ... Setting up libsphinxbase3t64:amd64 (0.8+5prealpha+1-21+b1) ... Setting up bio-rainbow (2.0.4+dfsg-2) ... Setting up wpasupplicant (2:2.10-22) ... Created symlink '/etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service' → '/usr/lib/systemd/system/wpa_supplicant.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/wpa_supplicant.service' → '/usr/lib/systemd/system/wpa_supplicant.service'. Setting up tex-common (6.19) ... update-language: texlive-base not installed and configured, doing nothing! Setting up python3-patsy (1.0.1-1) ... Setting up libmail-sendmail-perl (0.80-3) ... Setting up mecat2 (0.0+git20200428.f54c542+ds-4) ... Setting up dirmngr (2.2.46-5) ... Created symlink '/etc/systemd/user/sockets.target.wants/dirmngr.socket' → '/usr/lib/systemd/user/dirmngr.socket'. Setting up python3-gridfs (4.10.1-5) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-sqlalchemy-ext:amd64 (2.0.32+ds1-1+b2) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up python3-prometheus-client (0.21.1+ds1-1) ... Setting up libio-string-perl (1.08-4) ... Setting up python3-enlighten (1.11.2-1) ... Setting up python3-yamlordereddictloader (0.4.0-1.1) ... Setting up libreadonly-perl (2.050-3) ... Setting up dbus-user-session (1.16.2-2) ... Setting up python3-stone (3.3.8-1) ... Setting up python3-erfa (2.0.1.5+ds-1+b1) ... 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Setting up ncbi-tools-bin (6.1.20170106+dfsg2-5) ... Setting up avahi-daemon (0.8-16) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of force-reload. Created symlink '/etc/systemd/system/dbus-org.freedesktop.Avahi.service' → '/usr/lib/systemd/system/avahi-daemon.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/avahi-daemon.service' → '/usr/lib/systemd/system/avahi-daemon.service'. Created symlink '/etc/systemd/system/sockets.target.wants/avahi-daemon.socket' → '/usr/lib/systemd/system/avahi-daemon.socket'. Setting up libhttpclient-java (4.5.14-1) ... Setting up python3-pytest-mock (3.14.0-2) ... Setting up python3-statsmodels (0.14.4+dfsg-1) ... 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Setting up texlive-base (2024.20250309-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libalgorithm-diff-xs-perl (0.04-9) ... Setting up python3-stack-data (0.6.3-1) ... Setting up libapache-mime4j-java (0.8.12-1) ... Setting up libfltk1.3t64:amd64 (1.3.8-6.1+b1) ... Setting up libpipewire-0.3-0t64:amd64 (1.4.1-1) ... Setting up libcups2t64:amd64 (2.4.10-2+b1) ... Setting up tex-gyre (20180621-6) ... Setting up proteinortho (6.3.1+dfsg-1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.11.0-1) ... Setting up libhsakmt1:amd64 (6.2.4+ds-1) ... Setting up python3-nacl (1.5.0-7) ... 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Setting up python3-irodsclient (3.0.0-1) ... /usr/lib/python3/dist-packages/irods/test/admin_test.py:379: SyntaxWarning: invalid escape sequence '\]' new_password = """abc123!"#$%&'()*+,-./:;<=>?@[\]^_`{|}~Z""" /usr/lib/python3/dist-packages/irods/test/admin_test.py:406: SyntaxWarning: invalid escape sequence '\]' new_comment = """comment-abc123!"#$%&'()*+,-./:;<=>?@[\]^_{|}~Z""" # omitting backtick due to #170 /usr/lib/python3/dist-packages/irods/test/admin_test.py:425: SyntaxWarning: invalid escape sequence '\]' new_info = """info-abc123!"#$%&'()*+,-./:;<=>?@[\]^_{|}~Z""" # omitting backtick due to #170 /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:37: SyntaxWarning: invalid escape sequence '\.' localhost_with_optional_domain_pattern = re.compile("localhost(\.\S\S*)?$") /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:420: SyntaxWarning: invalid escape sequence '\s' NumThreadsRegex = re.compile("^num_threads\s*=\s*(\d+)", re.MULTILINE) /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:604: SyntaxWarning: invalid escape sequence '\s' "No\s+Checksum\s+Available.+\s+Replica\s\[(\d+)\]", re.IGNORECASE /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:1049: SyntaxWarning: invalid escape sequence '\S' re.finditer("redirect_to_host = (\S+)", search_text), /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:1050: SyntaxWarning: invalid escape sequence '\S' re.finditer("target_host = (\S+)", search_text), /usr/lib/python3/dist-packages/irods/test/rule_test.py:423: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches(lines[0], ".*\[Hello world!\]") /usr/lib/python3/dist-packages/irods/test/rule_test.py:445: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches(lines[0], "\[STRING\]\[\]") /usr/lib/python3/dist-packages/irods/test/rule_test.py:446: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches(lines[1], "\[STRING\]\[\]") /usr/lib/python3/dist-packages/irods/test/rule_test.py:455: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches(lines[0], "\[INTEGER\]\[5\]") /usr/lib/python3/dist-packages/irods/test/rule_test.py:456: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches(lines[1], "\[STRING\]\[A String\]") Setting up libasync-interrupt-perl (1.26-1+b6) ... Setting up python3-pkg-resources (75.8.0-1) ... Setting up libqt6concurrent6:amd64 (6.8.2+dfsg-5+b1) ... Setting up reprof (1.0.1-9) ... Setting up gnutls-bin (3.8.9-2) ... Setting up libgnutls28-dev:amd64 (3.8.9-2) ... Setting up libncbi-ngs3:amd64 (3.0.9+dfsg-7.1) ... Setting up libbio-perl-run-perl (1.7.3-13) ... Setting up ncbi-blast+-legacy (2.16.0+ds-6) ... Setting up libcairo-script-interpreter2:amd64 (1.18.4-1+b1) ... Setting up libjson-xs-perl (4.030-2+b5) ... Setting up libatk-bridge2.0-0t64:amd64 (2.56.0-3) ... Setting up python3-elasticsearch (8.17.2-1) ... Setting up mesa-opencl-icd:amd64 (25.0.2-1) ... Setting up tk8.6 (8.6.16-1) ... Setting up python3-pyfaidx (0.8.1.3-1) ... Setting up libfabric1:amd64 (2.0.0-4) ... Setting up libinput10:amd64 (1.27.1-1) ... Setting up placnet (1.04-1) ... Setting up libapbs3t64:amd64 (3.4.1-6+b3) ... Setting up libfile-mimeinfo-perl (0.35-1) ... Setting up kraken2 (2.1.3-1) ... Setting up libfltk-images1.3t64:amd64 (1.3.8-6.1+b1) ... Setting up metaphlan2-data (2.6.0+ds-4) ... Settings: Output files: "/usr/share/metaphlan2/db_v20/mpa_v20_m200.*.bt2" Line rate: 6 (line is 64 bytes) Lines per side: 1 (side is 64 bytes) Offset rate: 4 (one in 16) FTable chars: 10 Strings: unpacked Max bucket size: default Max bucket size, sqrt multiplier: default Max bucket size, len divisor: 4 Difference-cover sample period: 1024 Endianness: little Actual local endianness: little Sanity checking: disabled Assertions: disabled Random seed: 0 Sizeofs: void*:8, int:4, long:8, size_t:8 Input files DNA, FASTA: /var/lib/metaphlan2-data/markers.fasta Building a SMALL index Reading reference sizes Time reading reference sizes: 00:00:12 Calculating joined length Writing header Reserving space for joined string Joining reference sequences Time to join reference sequences: 00:00:02 bmax according to bmaxDivN setting: 177889396 Using parameters --bmax 133417047 --dcv 1024 Doing ahead-of-time memory usage test Passed! Constructing with these parameters: --bmax 133417047 --dcv 1024 Constructing suffix-array element generator Building DifferenceCoverSample Building sPrime Building sPrimeOrder V-Sorting samples V-Sorting samples time: 00:00:07 Allocating rank array Ranking v-sort output Ranking v-sort output time: 00:00:02 Invoking Larsson-Sadakane on ranks Invoking Larsson-Sadakane on ranks time: 00:00:05 Sanity-checking and returning Building samples Reserving space for 12 sample suffixes Generating random suffixes QSorting 12 sample offsets, eliminating duplicates QSorting sample offsets, eliminating duplicates time: 00:00:00 Multikey QSorting 12 samples (Using difference cover) Multikey QSorting samples time: 00:00:00 Calculating bucket sizes Splitting and merging Splitting and merging time: 00:00:00 Split 1, merged 7; iterating... Splitting and merging Splitting and merging time: 00:00:00 Split 1, merged 1; iterating... Splitting and merging Splitting and merging time: 00:00:00 Split 1, merged 0; iterating... Splitting and merging Splitting and merging time: 00:00:00 Avg bucket size: 1.01651e+08 (target: 133417046) Converting suffix-array elements to index image Allocating ftab, absorbFtab Entering Ebwt loop Getting block 1 of 7 Reserving size (133417047) for bucket 1 Calculating Z arrays for bucket 1 Entering block accumulator loop for bucket 1: bucket 1: 10% bucket 1: 20% bucket 1: 30% bucket 1: 40% bucket 1: 50% bucket 1: 60% bucket 1: 70% bucket 1: 80% bucket 1: 90% bucket 1: 100% Sorting block of length 73481450 for bucket 1 (Using difference cover) Sorting block time: 00:00:12 Returning block of 73481451 for bucket 1 Getting block 2 of 7 Reserving size (133417047) for bucket 2 Calculating Z arrays for bucket 2 Entering block accumulator loop for bucket 2: bucket 2: 10% bucket 2: 20% bucket 2: 30% bucket 2: 40% bucket 2: 50% bucket 2: 60% bucket 2: 70% bucket 2: 80% bucket 2: 90% bucket 2: 100% Sorting block of length 112624089 for bucket 2 (Using difference cover) Sorting block time: 00:00:19 Returning block of 112624090 for bucket 2 Getting block 3 of 7 Reserving size (133417047) for bucket 3 Calculating Z arrays for bucket 3 Entering block accumulator loop for bucket 3: bucket 3: 10% bucket 3: 20% bucket 3: 30% bucket 3: 40% bucket 3: 50% bucket 3: 60% bucket 3: 70% bucket 3: 80% bucket 3: 90% bucket 3: 100% Sorting block of length 114872559 for bucket 3 (Using difference cover) Sorting block time: 00:00:18 Returning block of 114872560 for bucket 3 Getting block 4 of 7 Reserving size (133417047) for bucket 4 Calculating Z arrays for bucket 4 Entering block accumulator loop for bucket 4: bucket 4: 10% bucket 4: 20% bucket 4: 30% bucket 4: 40% bucket 4: 50% bucket 4: 60% bucket 4: 70% bucket 4: 80% bucket 4: 90% bucket 4: 100% Sorting block of length 96915131 for bucket 4 (Using difference cover) Sorting block time: 00:00:15 Returning block of 96915132 for bucket 4 Getting block 5 of 7 Reserving size (133417047) for bucket 5 Calculating Z arrays for bucket 5 Entering block accumulator loop for bucket 5: bucket 5: 10% bucket 5: 20% bucket 5: 30% bucket 5: 40% bucket 5: 50% bucket 5: 60% bucket 5: 70% bucket 5: 80% bucket 5: 90% bucket 5: 100% Sorting block of length 110535719 for bucket 5 (Using difference cover) Sorting block time: 00:00:18 Returning block of 110535720 for bucket 5 Getting block 6 of 7 Reserving size (133417047) for bucket 6 Calculating Z arrays for bucket 6 Entering block accumulator loop for bucket 6: bucket 6: 10% bucket 6: 20% bucket 6: 30% bucket 6: 40% bucket 6: 50% bucket 6: 60% bucket 6: 70% bucket 6: 80% bucket 6: 90% bucket 6: 100% Sorting block of length 79173124 for bucket 6 (Using difference cover) Sorting block time: 00:00:13 Returning block of 79173125 for bucket 6 Getting block 7 of 7 Reserving size (133417047) for bucket 7 Calculating Z arrays for bucket 7 Entering block accumulator loop for bucket 7: bucket 7: 10% bucket 7: 20% bucket 7: 30% bucket 7: 40% bucket 7: 50% bucket 7: 60% bucket 7: 70% bucket 7: 80% bucket 7: 90% bucket 7: 100% Sorting block of length 123955509 for bucket 7 (Using difference cover) Sorting block time: 00:00:20 Returning block of 123955510 for bucket 7 Exited Ebwt loop fchr[A]: 0 fchr[C]: 193247476 fchr[G]: 355349181 fchr[T]: 534730948 fchr[$]: 711557587 Exiting Ebwt::buildToDisk() Returning from initFromVector Wrote 304203219 bytes to primary EBWT file: /usr/share/metaphlan2/db_v20/mpa_v20_m200.1.bt2.tmp Wrote 177889404 bytes to secondary EBWT file: /usr/share/metaphlan2/db_v20/mpa_v20_m200.2.bt2.tmp Re-opening _in1 and _in2 as input streams Returning from Ebwt constructor Headers: len: 711557587 bwtLen: 711557588 sz: 177889397 bwtSz: 177889397 lineRate: 6 offRate: 4 offMask: 0xfffffff0 ftabChars: 10 eftabLen: 20 eftabSz: 80 ftabLen: 1048577 ftabSz: 4194308 offsLen: 44472350 offsSz: 177889400 lineSz: 64 sideSz: 64 sideBwtSz: 48 sideBwtLen: 192 numSides: 3706030 numLines: 3706030 ebwtTotLen: 237185920 ebwtTotSz: 237185920 color: 0 reverse: 0 Total time for call to driver() for forward index: 00:04:46 Reading reference sizes Time reading reference sizes: 00:00:05 Calculating joined length Writing header Reserving space for joined string Joining reference sequences Time to join reference sequences: 00:00:02 Time to reverse reference sequence: 00:00:01 bmax according to bmaxDivN setting: 177889396 Using parameters --bmax 133417047 --dcv 1024 Doing ahead-of-time memory usage test Passed! Constructing with these parameters: --bmax 133417047 --dcv 1024 Constructing suffix-array element generator Building DifferenceCoverSample Building sPrime Building sPrimeOrder V-Sorting samples V-Sorting samples time: 00:00:08 Allocating rank array Ranking v-sort output Ranking v-sort output time: 00:00:02 Invoking Larsson-Sadakane on ranks Invoking Larsson-Sadakane on ranks time: 00:00:05 Sanity-checking and returning Building samples Reserving space for 12 sample suffixes Generating random suffixes QSorting 12 sample offsets, eliminating duplicates QSorting sample offsets, eliminating duplicates time: 00:00:00 Multikey QSorting 12 samples (Using difference cover) Multikey QSorting samples time: 00:00:00 Calculating bucket sizes Splitting and merging Splitting and merging time: 00:00:00 Split 1, merged 6; iterating... Splitting and merging Splitting and merging time: 00:00:00 Avg bucket size: 1.01651e+08 (target: 133417046) Converting suffix-array elements to index image Allocating ftab, absorbFtab Entering Ebwt loop Getting block 1 of 7 Reserving size (133417047) for bucket 1 Calculating Z arrays for bucket 1 Entering block accumulator loop for bucket 1: bucket 1: 10% bucket 1: 20% bucket 1: 30% bucket 1: 40% bucket 1: 50% bucket 1: 60% bucket 1: 70% bucket 1: 80% bucket 1: 90% bucket 1: 100% Sorting block of length 91718666 for bucket 1 (Using difference cover) Sorting block time: 00:00:15 Returning block of 91718667 for bucket 1 Getting block 2 of 7 Reserving size (133417047) for bucket 2 Calculating Z arrays for bucket 2 Entering block accumulator loop for bucket 2: bucket 2: 10% bucket 2: 20% bucket 2: 30% bucket 2: 40% bucket 2: 50% bucket 2: 60% bucket 2: 70% bucket 2: 80% bucket 2: 90% bucket 2: 100% Sorting block of length 107401525 for bucket 2 (Using difference cover) Sorting block time: 00:00:18 Returning block of 107401526 for bucket 2 Getting block 3 of 7 Reserving size (133417047) for bucket 3 Calculating Z arrays for bucket 3 Entering block accumulator loop for bucket 3: bucket 3: 10% bucket 3: 20% bucket 3: 30% bucket 3: 40% bucket 3: 50% bucket 3: 60% bucket 3: 70% bucket 3: 80% bucket 3: 90% bucket 3: 100% Sorting block of length 113723363 for bucket 3 (Using difference cover) Sorting block time: 00:00:19 Returning block of 113723364 for bucket 3 Getting block 4 of 7 Reserving size (133417047) for bucket 4 Calculating Z arrays for bucket 4 Entering block accumulator loop for bucket 4: bucket 4: 10% bucket 4: 20% bucket 4: 30% bucket 4: 40% bucket 4: 50% bucket 4: 60% bucket 4: 70% bucket 4: 80% bucket 4: 90% bucket 4: 100% Sorting block of length 95758918 for bucket 4 (Using difference cover) Sorting block time: 00:00:15 Returning block of 95758919 for bucket 4 Getting block 5 of 7 Reserving size (133417047) for bucket 5 Calculating Z arrays for bucket 5 Entering block accumulator loop for bucket 5: bucket 5: 10% bucket 5: 20% bucket 5: 30% bucket 5: 40% bucket 5: 50% bucket 5: 60% bucket 5: 70% bucket 5: 80% bucket 5: 90% bucket 5: 100% Sorting block of length 104659734 for bucket 5 (Using difference cover) Sorting block time: 00:00:17 Returning block of 104659735 for bucket 5 Getting block 6 of 7 Reserving size (133417047) for bucket 6 Calculating Z arrays for bucket 6 Entering block accumulator loop for bucket 6: bucket 6: 10% bucket 6: 20% bucket 6: 30% bucket 6: 40% bucket 6: 50% bucket 6: 60% bucket 6: 70% bucket 6: 80% bucket 6: 90% bucket 6: 100% Sorting block of length 116767199 for bucket 6 (Using difference cover) Sorting block time: 00:00:18 Returning block of 116767200 for bucket 6 Getting block 7 of 7 Reserving size (133417047) for bucket 7 Calculating Z arrays for bucket 7 Entering block accumulator loop for bucket 7: bucket 7: 10% bucket 7: 20% bucket 7: 30% bucket 7: 40% bucket 7: 50% bucket 7: 60% bucket 7: 70% bucket 7: 80% bucket 7: 90% bucket 7: 100% Sorting block of length 81528176 for bucket 7 (Using difference cover) Sorting block time: 00:00:13 Returning block of 81528177 for bucket 7 Exited Ebwt loop fchr[A]: 0 fchr[C]: 193247476 fchr[G]: 355349181 fchr[T]: 534730948 fchr[$]: 711557587 Exiting Ebwt::buildToDisk() Returning from initFromVector Wrote 304203219 bytes to primary EBWT file: /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.1.bt2.tmp Wrote 177889404 bytes to secondary EBWT file: /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.2.bt2.tmp Re-opening _in1 and _in2 as input streams Returning from Ebwt constructor Headers: len: 711557587 bwtLen: 711557588 sz: 177889397 bwtSz: 177889397 lineRate: 6 offRate: 4 offMask: 0xfffffff0 ftabChars: 10 eftabLen: 20 eftabSz: 80 ftabLen: 1048577 ftabSz: 4194308 offsLen: 44472350 offsSz: 177889400 lineSz: 64 sideSz: 64 sideBwtSz: 48 sideBwtLen: 192 numSides: 3706030 numLines: 3706030 ebwtTotLen: 237185920 ebwtTotSz: 237185920 color: 0 reverse: 1 Total time for backward call to driver() for mirror index: 00:04:16 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.3.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.3.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.4.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.4.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.1.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.1.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.2.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.2.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.1.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.1.bt2 Renaming /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.2.bt2.tmp to /usr/share/metaphlan2/db_v20/mpa_v20_m200.rev.2.bt2 Metaphlan2 data are properly created. Setting up libhttp-negotiate-perl (6.01-2) ... Setting up mesa-libgallium:amd64 (25.0.2-1) ... Setting up libngs-jni:amd64 (3.0.9+dfsg-7.1) ... Setting up scoary (1.6.16-10) ... Setting up libparams-validationcompiler-perl (0.31-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... Setting up libqt5dbus5t64:amd64 (5.15.15+dfsg-4+b1) ... Setting up gir1.2-freedesktop:amd64 (1.84.0-1) ... Setting up libplexus-io-java (3.3.1-2) ... Setting up python3-cclib (1.8-1) ... /usr/lib/python3/dist-packages/cclib/method/volume.py:19: SyntaxWarning: invalid escape sequence '\p' \psi (x, y, z) = x^a * y^b * z^c * exp(-\lambda * r^2) Setting up libtext-simpletable-perl (2.07-1) ... Setting up gstreamer1.0-x:amd64 (1.26.0-1) ... Setting up libstatistics-descriptive-perl (3.0801-1) ... Setting up rambo-k (1.21+dfsg-5) ... Setting up python3-cairo (1.27.0-2) ... Setting up libqt5sql5-sqlite:amd64 (5.15.15+dfsg-4+b1) ... Setting up python3-setuptools (75.8.0-1) ... Setting up libdate-calc-perl (6.4-2) ... Setting up libpangoxft-1.0-0:amd64 (1.56.3-1) ... Setting up wget (1.25.0-2) ... Setting up gcc-x86-64-linux-gnu (4:14.2.0-1) ... Setting up libcache-cache-perl (1.08-3) ... Setting up python3-datacache (1.4.1-2) ... Setting up gpg-wks-client (2.2.46-5) ... Setting up altree (1.3.2-2+b4) ... Setting up libcommons-compress-java (1.27.1-2) ... Setting up libcurl4t64:amd64 (8.13.0~rc2-1) ... Setting up librdkit1t64 (202409.6-2) ... Setting up ssake (4.0.1-2) ... Setting up python3-jedi (0.19.1+ds1-1) ... Setting up libkdb5-10t64:amd64 (1.21.3-5) ... Setting up libgbm1:amd64 (25.0.2-1) ... Setting up python3-cvxopt (1.3.0+dfsg-1+b9) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up python3-logilab-common (2.1.0-1) ... Setting up libquazip1-qt6-1t64:amd64 (1.4-1.1+b2) ... Setting up libdate-calc-xs-perl:amd64 (6.4-2+b4) ... Setting up python3-biomaj3-zipkin (0.2.2-3) ... Setting up python3-zope.event (5.0-0.1) ... Setting up libstatistics-pca-perl (0.0.1-2) ... Setting up python3-zope.interface (7.2-1+b1) ... Setting up libsm-dev:amd64 (2:1.2.4-1) ... Setting up cutadapt (4.7-2) ... Setting up python3-influxdb (5.3.2-5) ... Setting up python3-openssl (25.0.0-1) ... Setting up python3-flask (3.1.0-2) ... Setting up python3-watchdog (6.0.0-1) ... Setting up libbatik-java (1.18+dfsg-2) ... Setting up liblog4j2-java (2.19.0-2) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up blt (2.5.3+dfsg-8) ... Setting up preview-latex-style (13.2-1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up python3-hmmlearn (0.3.2-2+b2) ... Setting up libqt5positioning5:amd64 (5.15.15+dfsg-3+b1) ... Setting up q2templates (2024.5.0+ds-3) ... Setting up python3-docker (7.1.0-2) ... Setting up libcgi-pm-perl (4.67-1) ... Setting up libgl1-mesa-dri:amd64 (25.0.2-1) ... Setting up libpng-dev:amd64 (1.6.47-1.1) ... Setting up libqt5network5t64:amd64 (5.15.15+dfsg-4+b1) ... Setting up python3-gtfparse (1.3.0+ds-2) ... Setting up libhmsbeagle1v5:amd64 (4.0.1+dfsg-3) ... Setting up grinder (0.5.4-6) ... Setting up libraptor2-0:amd64 (2.0.16-5+b1) ... Setting up texlive-plain-generic (2024.20250309-2) ... Setting up libqt5script5:amd64 (5.15.15+dfsg-2) ... Setting up python3-schema-salad (8.8.20241206093842-2+b1) ... Setting up python3-pyfastx (2.2.0-1+b1) ... Setting up libtest-differences-perl (0.71-1) ... Setting up staden-common (2.0.0+b11-5) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3.1) ... Setting up libcurl3t64-gnutls:amd64 (8.13.0~rc2-1) ... Setting up python-odf-tools (1.4.2-4) ... Setting up python3-msal (1.32.0-1) ... Setting up mrbayes (3.2.7a-7+b1) ... Setting up libqt5xml5t64:amd64 (5.15.15+dfsg-4+b1) ... Setting up libopenbabel7 (3.1.1+dfsg-11+b3) ... Setting up python3-tk:amd64 (3.13.2-1) ... Setting up libappstream5:amd64 (1.0.4-1) ... Setting up libqmi-glib5:amd64 (1.35.95-2) ... Setting up dconf-service (0.40.0-5) ... Setting up python3-sklearn-pandas (2.2.0-4) ... Setting up texlive-lang-greek (2024.20250309-1) ... Setting up libhtml-format-perl (2.16-2) ... Setting up libngtcp2-crypto-gnutls-dev:amd64 (1.11.0-1) ... Setting up python3-libcloud (3.8.0+repack-4) ... Setting up python3-shasta (0.12.0-1+b2) ... Setting up librasqal3t64:amd64 (0.9.33-2.1+b2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up prinseq-lite (0.20.4-6) ... Setting up python3-gevent (24.11.1-1+b1) ... Setting up libqt5test5t64:amd64 (5.15.15+dfsg-4+b1) ... Setting up libxerces-c3.2t64:amd64 (3.2.4+debian-1.3+b2) ... Setting up librdf0t64:amd64 (1.0.17-4+b1) ... Setting up apache2-bin (2.4.63-1) ... Setting up libbibtex-parser-perl (1.05+dfsg-1) ... Setting up libqt5networkauth5:amd64 (5.15.15-3) ... Setting up x11-xserver-utils (7.7+11) ... Setting up python3-networkx (3.2.1-5) ... Setting up pyfastx (2.2.0-1+b1) ... Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gir1.2-harfbuzz-0.0:amd64 (10.2.0-1+b1) ... Setting up gnome-themes-extra:amd64 (3.28-4) ... Setting up chimeraslayer (20101212+dfsg1-6) ... Setting up gcc-14 (14.2.0-19) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-19) ... Setting up python3-prov (2.0.1-1) ... Setting up ipig (0.0.r5-5) ... Setting up librsvg2-2:amd64 (2.60.0+dfsg-1) ... Setting up libpocketsphinx3:amd64 (0.8+5prealpha+1-15+b4) ... Setting up libgnustep-base1.31:amd64 (1.31.1-2) ... Setting up python3-strictyaml (1.6.1-3) ... Setting up python3-responses (0.25.6-1) ... Setting up python3-pil:amd64 (11.1.0-5+b1) ... Setting up libqt5websockets5:amd64 (5.15.15-2) ... Setting up ragout (2.3-5) ... Setting up gir1.2-pango-1.0:amd64 (1.56.3-1) ... Setting up python3-pycurl (7.45.4-1+b1) ... Setting up libegl-mesa0:amd64 (25.0.2-1) ... Setting up python3-airr (1.5.1-1) ... Setting up python3-flask-cors (5.0.0-1) ... Setting up python3-oauthlib (3.2.2-3) ... Setting up gstreamer1.0-plugins-base:amd64 (1.26.0-1) ... Setting up libcfitsio10t64:amd64 (4.5.0-5) ... Setting up libhttpmime-java (4.5.14-1) ... Setting up libbio-searchio-hmmer-perl (1.7.3-2) ... Setting up libnet-smtp-ssl-perl (1.04-2) ... Setting up python3-biomaj3-core (3.0.28-4) ... Setting up texlive-latex-base (2024.20250309-1) ... Setting up python3-aiodns (3.2.0-2) ... Setting up cwl-upgrader (1.2.12-1) ... Setting up python3-pil.imagetk:amd64 (11.1.0-5+b1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libmailtools-perl (2.22-1) ... Setting up libcgi-session-perl (4.48-4) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up libxt-dev:amd64 (1:1.2.1-1.2+b2) ... Setting up libqt5qml5:amd64 (5.15.15+dfsg-3) ... Setting up python3-pooch (1.8.2-1) ... Setting up python3-openpyxl (3.1.5+dfsg-1) ... Setting up python3-ipython (8.30.0-2) ... Setting up python3-rdkit (202409.6-2) ... Setting up python3-google-auth (2.28.2-3) ... Setting up libpython3.13-dev:amd64 (3.13.2-2) ... Setting up ncbi-entrez-direct (19.2.20230331+dfsg-3+b5) ... Setting up python3-botocore (1.37.9+repack-1) ... Setting up texlive-latex-recommended (2024.20250309-1) ... Setting up r-base-core (4.4.3-1+b1) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.5.3-1) ... Setting up r-cran-squarem (2021.1-1) ... Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libshout3:amd64 (2.4.6-1+b3) ... Setting up python3-biomaj3-cli (3.1.11-5) ... Setting up r-cran-tiff (0.1-12-1) ... Setting up r-cran-fastmatch (1.1-6-1) ... Setting up r-cran-gparotation (2024.3-1-1) ... Setting up r-cran-profilemodel (0.6.1-1) ... Setting up libxml-filter-buffertext-perl (1.01-7) ... Setting up r-cran-labeling (0.4.3-1) ... Setting up r-cran-biasedurn (2.0.12-1) ... Setting up r-cran-rgenoud (5.9-0.11-1) ... Setting up libgtk2.0-0t64:amd64 (2.24.33-7) ... Setting up libavcodec61:amd64 (7:7.1.1-1+b1) ... Setting up libace-perl (1.92-12+b1) ... Setting up coinor-libcbc3.1:amd64 (2.10.12+ds-1) ... Setting up r-cran-rcppprogress (0.4.2-2) ... Setting up r-cran-sourcetools (0.1.7-1-1) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up r-cran-futile.options (1.0.1-3) ... Setting up libqt5webchannel5:amd64 (5.15.15-2) ... Setting up r-cran-argparser (0.7.2-1) ... Setting up git (1:2.49.0-1) ... Setting up r-cran-rsvg (2.6.1-1) ... Setting up python3-biomaj3-download (3.2.12-2) ... Setting up librsvg2-common:amd64 (2.60.0+dfsg-1) ... Setting up r-cran-lattice (0.22-6-1) ... Setting up libssh2-1-dev:amd64 (1.11.1-1) ... Setting up r-cran-tinytest (1.4.1-1) ... Setting up r-cran-ps (1.9.0-1) ... Setting up r-cran-nlme (3.1.167-1) ... Setting up r-cran-modeltools (0.2-23-2) ... Setting up texlive-pictures (2024.20250309-1) ... Setting up python3-colormath (3.0.0-4) ... /usr/lib/python3/dist-packages/colormath/chromatic_adaptation.py:85: SyntaxWarning: invalid escape sequence '\*' logger.debug(" \* Applying adaptation matrix: %s", adaptation) /usr/lib/python3/dist-packages/colormath/color_appearance_models.py:692: SyntaxWarning: invalid escape sequence '\s' :param sigma: Relative luminance parameter :math:`\sigma`. For average surround set :math:`\sigma=1/2.3`, /usr/lib/python3/dist-packages/colormath/color_appearance_models.py:798: SyntaxWarning: invalid escape sequence '\s' :param sigma: :math:`\sigma` /usr/lib/python3/dist-packages/colormath/color_conversions.py:40: SyntaxWarning: invalid escape sequence '\*' logger.debug(" \* Applying RGB conversion matrix: %s->%s", /usr/lib/python3/dist-packages/colormath/color_conversions.py:488: SyntaxWarning: invalid escape sequence '\-' logger.debug(" \- Target RGB space: %s", target_rgb) /usr/lib/python3/dist-packages/colormath/color_conversions.py:490: SyntaxWarning: invalid escape sequence '\-' logger.debug(" \- Target native illuminant: %s", target_illum) /usr/lib/python3/dist-packages/colormath/color_conversions.py:491: SyntaxWarning: invalid escape sequence '\-' logger.debug(" \- XYZ color's illuminant: %s", cobj.illuminant) /usr/lib/python3/dist-packages/colormath/color_conversions.py:497: SyntaxWarning: invalid escape sequence '\*' logger.debug(" \* Applying transformation from %s to %s ", /usr/lib/python3/dist-packages/colormath/color_conversions.py:503: SyntaxWarning: invalid escape sequence '\*' logger.debug(" \* New values: %.3f, %.3f, %.3f", /usr/lib/python3/dist-packages/colormath/color_objects.py:452: SyntaxWarning: invalid escape sequence '\-' logger.debug(" \- Original illuminant: %s", self.illuminant) /usr/lib/python3/dist-packages/colormath/color_objects.py:453: SyntaxWarning: invalid escape sequence '\-' logger.debug(" \- Target illuminant: %s", target_illuminant) /usr/lib/python3/dist-packages/colormath/color_objects.py:459: SyntaxWarning: invalid escape sequence '\*' logger.debug(" \* Applying transformation from %s to %s ", Setting up r-cran-farver (2.1.2-1) ... Setting up r-cran-pls (2.8-5-1) ... Setting up r-cran-poorman (0.2.7+dfsg-1) ... Setting up g++-14-x86-64-linux-gnu (14.2.0-19) ... Setting up r-cran-formatr (1.14-2) ... Setting up r-cran-pbapply (1.7-2-1) ... Setting up r-cran-formula (1.2-5-1) ... Setting up python3-reportlab (4.3.1-1) ... Setting up r-cran-hexbin (1.28.5-1) ... Setting up r-cran-polspline (1.1.25-1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up r-cran-remotes (2.5.0+dfsg-1) ... Setting up libhtml-tableextract-perl (2.15-2) ... Setting up r-cran-zip (2.3.2-1) ... Setting up python3-pytest-astropy (0.11.0-1) ... Setting up r-cran-xml (3.99-0.18-1) ... Setting up gdpc (2.2.5-16+b1) ... Setting up r-cran-gss (2.2-8-1) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libgail18t64:amd64 (2.24.33-7) ... Setting up r-cran-intervals (0.15.5-1) ... Setting up r-cran-spatstat.utils (3.1-3-1) ... Setting up trinityrnaseq-examples (2.15.2+dfsg-1) ... Setting up libhdf5-310:amd64 (1.14.5+repack-3) ... Setting up belvu (4.44.1+dfsg-7.1+b3) ... Setting up r-cran-whisker (0.4.1-1) ... Setting up libhttp-daemon-perl (6.16-1) ... Setting up python3-rpy2 (3.5.17-1) ... Setting up r-cran-viridislite (0.4.2-2) ... Setting up r-cran-locfit (1.5-9.12-1) ... Setting up libgtk2.0-bin (2.24.33-7) ... Setting up python3-stopit (1.1.2-3) ... Setting up r-cran-g.data (2.4.1-1) ... Setting up macsyfinder (2.1.4-1+b1) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-3) ... Setting up r-cran-globaloptions (0.1.2-1) ... Setting up r-cran-pixmap (0.4-13-1) ... Setting up r-cran-cluster (2.1.8.1-1) ... Setting up r-cran-rhpcblasctl (0.23-42-1+b1) ... Setting up r-cran-fontbitstreamvera (0.1.1+dfsg-5) ... Setting up genometools-common (1.6.5+ds-2.2) ... Setting up r-cran-sparsem (1.84-2-1+b1) ... Setting up libkadm5srv-mit12:amd64 (1.21.3-5) ... Setting up libegl1:amd64 (1.7.0-1+b2) ... Setting up texlive-fonts-recommended (2024.20250309-1) ... Setting up r-cran-statmod (1.5.0-1) ... Setting up r-cran-isocodes (2024.02.12-1) ... Setting up g++-x86-64-linux-gnu (4:14.2.0-1) ... Setting up libhts3t64:amd64 (1.21+ds-1) ... Setting up libplexus-archiver-java (4.6.1-1) ... Setting up r-cran-nnet (7.3-20-1) ... Setting up cclib (1.8-1) ... Setting up libbigwig0t64:amd64 (0.4.7+dfsg-3.1+b2) ... Setting up dextractor (1.0-6+b2) ... Setting up r-cran-tensor (1.5-4) ... Setting up r-cran-lazyeval (0.2.2-1+b1) ... Setting up crac (2.5.2+dfsg-6) ... Setting up curl (8.13.0~rc2-1) ... Setting up tipa (2:1.3-21) ... Setting up r-cran-lpsolve (5.6.23-1) ... Setting up python3-ipdb (0.13.13-3) ... Setting up r-cran-insight (1.1.0+dfsg-1) ... Setting up r-cran-wk (0.9.4-1) ... Setting up r-cran-clipr (0.8.0-1) ... Setting up r-cran-polynom (1.4-1+dfsg-1) ... Setting up r-cran-commonmark (1.9.5-1) ... Setting up g++-14 (14.2.0-19) ... Setting up mesa-va-drivers:amd64 (25.0.2-1) ... Setting up r-cran-rjson (0.2.23-1) ... Setting up r-cran-flashclust (1.01-2-3) ... Setting up r-cran-proxy (0.4-27-1) ... Setting up libngs-java:amd64 (3.0.9+dfsg-7.1) ... Setting up r-cran-r6 (2.6.1-1) ... Setting up r-cran-pkgkitten (0.2.4-1) ... Setting up libwxbase3.2-1t64:amd64 (3.2.6+dfsg-2) ... Setting up python3-paramiko (3.5.1-2) ... Setting up r-cran-jpeg (0.1-10-1) ... Setting up r-cran-dfoptim (2023.1.0-1) ... Setting up r-cran-gee (4.13-29-1) ... Setting up r-cran-gsa (1.03.3-1) ... Setting up gfortran-14 (14.2.0-19) ... Setting up r-cran-startupmsg (1.0.0-1) ... Setting up r-cran-pbivnorm (0.6.0-4) ... Setting up r-cran-spatstat.univar (3.1-2-1) ... Setting up libsdl2-2.0-0:amd64 (2.32.2+dfsg-2) ... Setting up r-cran-ca (0.71.1-2) ... Setting up r-cran-chron (2.3-62-1) ... Setting up r-cran-numderiv (2016.8-1.1-3) ... Setting up tk (8.6.16) ... Setting up libhdf5-fortran-310:amd64 (1.14.5+repack-3) ... Setting up python3-gi-cairo (3.50.0-4+b1) ... Setting up python3-flask-sqlalchemy (3.1.1-3) ... Setting up r-cran-fastcluster (1.2.6-2+b1) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up r-cran-git2r (0.35.0-1) ... Setting up r-cran-genabel.data (1.0.0-4) ... Setting up kallisto (0.48.0+dfsg-4+b1) ... Setting up r-cran-coda (0.19-4.1-1) ... Setting up r-cran-rcppparallel (5.1.7+dfsg-5+b2) ... Setting up r-cran-magrittr (2.0.3-1) ... Setting up r-cran-desolve (1.40-1) ... Setting up r-cran-fit.models (0.64-1) ... Setting up ecopcr (1.0.1+dfsg-5) ... Setting up r-cran-testit (0.13-1) ... Setting up r-cran-rappdirs (0.3.3-1) ... Setting up libseqlib2:amd64 (1.2.0+dfsg-11+b3) ... Setting up pylint (3.3.4-1) ... Setting up r-cran-filelock (1.0.3-1) ... Setting up r-cran-deoptim (2.2-8-1) ... Setting up macs (3.0.2-1+b3) ... Setting up libbarclay-java (5.0.0+dfsg-1) ... Setting up python3-requests-oauthlib (1.3.1-1) ... Setting up r-cran-emoa (0.5-3-1) ... Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... Setting up libfluidsynth3:amd64 (2.4.4+dfsg-1) ... Setting up r-cran-evd (2.3-7.1-1) ... Setting up r-cran-microbenchmark (1.5.0-1) ... Setting up r-cran-qvcalc (1.0.4-1) ... Setting up r-cran-datawizard (1.0.1+dfsg-1) ... Setting up seaview (1:5.0.5-2+b1) ... Setting up r-cran-relimp (1.0-5-4) ... Setting up r-cran-gridgraphics (0.5-1-1) ... Setting up python3-astropy (7.0.1-2+b1) ... Setting up r-cran-quadprog (1.5-8-1+b1) ... Setting up r-cran-registry (0.5-1-2) ... Setting up r-cran-ggeffects (2.2.1+dfsg-1) ... Setting up krb5-multidev:amd64 (1.21.3-5) ... Setting up libhdf5-cpp-310:amd64 (1.14.5+repack-3) ... Setting up r-cran-littler (0.3.20-2) ... Setting up r-cran-psychotools (0.7-4-1) ... Setting up r-cran-nleqslv (3.3.5-1) ... Setting up r-cran-permute (0.9-7-1) ... Setting up transdecoder (5.7.1-2) ... Setting up augustus (3.5.0+dfsg-4+b5) ... Setting up r-cran-bh (1.84.0-1) ... Setting up delly (1.1.8-1+b2) ... Setting up libgs10-common (10.05.0~dfsg-1) ... Setting up r-cran-fs (1.6.5+dfsg-1) ... Setting up sra-toolkit (3.0.9+dfsg-7.1) ... Setting up r-cran-rcpp (1.0.14-1) ... Setting up r-cran-palmerpenguins (0.1.1-1) ... Setting up r-cran-optimparallel (1.0-2-2) ... Setting up r-cran-curl (6.2.1+dfsg-1) ... Setting up r-cran-combinat (0.0-8-7) ... Setting up r-cran-profmem (0.6.0+dfsg-1) ... Setting up libxml-sax-writer-perl (0.57-3) ... Setting up libsvg-graph-perl (0.02-4) ... Setting up r-cran-codetools (0.2-20-1) ... Setting up r-cran-brio (1.1.5-1) ... Setting up r-cran-estimability (1.5.1-1) ... Setting up r-cran-nloptr (2.2.1-1) ... Setting up python3-biomaj3-user (3.0.12-2) ... Setting up nanopolish (0.14.0-1+b3) ... Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ... Setting up r-cran-boot (1.3-31-1) ... Setting up ctffind (4.1.14-3) ... Setting up r-cran-inline (0.3.21-1) ... Setting up simka (1.5.3-8+b3) ... Setting up r-cran-diffobj (0.3.5-1+b1) ... Setting up r-cran-rematch (2.0.0-1) ... Setting up r-cran-maps (3.4.2.1-1) ... Setting up r-cran-diptest (0.77-1-1) ... Setting up r-cran-bigmemory.sri (0.1.8-1) ... Setting up libproxy1v5:amd64 (0.5.9-1) ... Setting up r-bioc-biocgenerics (0.52.0-2) ... Setting up r-other-mott-happy.hbrem (2.4-5) ... Setting up libqt5qmlmodels5:amd64 (5.15.15+dfsg-3) ... Setting up r-cran-rlang (1.1.5-1) ... Setting up r-cran-cftime (1.5.1-1) ... Setting up r-cran-minpack.lm (1.2-4-1) ... Setting up libglx-mesa0:amd64 (25.0.2-1) ... Setting up r-cran-matrixstats (1.5.0-1) ... Setting up r-cran-findpython (1.0.9-1) ... Setting up r-cran-gridbase (0.4-7-5) ... Setting up r-cran-gbrd (0.4.12-1) ... Setting up python3-pysam (0.23.0+ds-1+b1) ... Setting up libpython3-dev:amd64 (3.13.2-2) ... Setting up r-cran-listenv (0.9.1+dfsg-1) ... Setting up r-cran-assertthat (0.2.1-2) ... Setting up blixem (4.44.1+dfsg-7.1+b3) ... Setting up r-cran-learnbayes (2.15.1-4) ... Setting up littler (0.3.20-2) ... Setting up libcbf1t64:amd64 (0.9.7+dfsg1-5+b1) ... Setting up r-cran-gap.datasets (0.0.6-1) ... Setting up r-cran-contfrac (1.1-12-2) ... Setting up r-cran-brglm (0.7.2-1+b1) ... Setting up libpoppler147:amd64 (25.03.0-2) ... Setting up r-cran-multicool (1.0.1-1) ... Setting up r-cran-pracma (2.4.4-3) ... Setting up r-cran-rcppdate (0.0.5-1) ... Setting up vt (0.57721+ds-3+b1) ... Setting up shasta (0.12.0-1+b2) ... Setting up libglx0:amd64 (1.7.0-1+b2) ... Setting up dconf-gsettings-backend:amd64 (0.40.0-5) ... Setting up python3-openbabel (3.1.1+dfsg-11+b3) ... Setting up r-cran-uroot (2.1-3-1) ... Setting up r-cran-amap (0.8-20-2) ... Setting up libproj25:amd64 (9.6.0-1) ... Setting up r-cran-bio3d (2.4-5-1) ... Setting up r-cran-pbmcapply (1.5.1-1) ... Setting up python3-spectra (0.1.0-1) ... Setting up r-cran-pvclust (2.2-0-2) ... Setting up r-bioc-matrixgenerics (1.18.1-1) ... Setting up r-cran-dynamictreecut (1.63-1-3) ... Setting up r-cran-uuid (1.2-1-1) ... Setting up libhmsbeagle-java:amd64 (4.0.1+dfsg-3) ... Setting up qtltools (1.3.1+dfsg-4+b3) ... Setting up r-cran-xfun (0.51+dfsg-1) ... Setting up r-cran-vgam (1.1-13-1) ... Setting up libmime-lite-perl (3.033-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up r-cran-rcpphnsw (0.6.0+ds-1) ... Setting up r-cran-urca (1.3-4-1) ... Setting up r-cran-sys (3.4.3-1) ... Setting up r-cran-rwiener (1.3-3-1+b1) ... Setting up r-cran-deoptimr (1.1-3-1-1) ... Setting up r-cran-gclus (1.3.2-2) ... Setting up libgail-common:amd64 (2.24.33-7) ... Setting up populations (1.2.33+svn0120106+dfsg-7) ... Setting up r-bioc-impute (1.80.0-2) ... Setting up trim-galore (0.6.10-1) ... Setting up r-cran-plogr (0.2.0-3) ... Setting up libtest-most-perl (0.38-1) ... Setting up r-cran-withr (3.0.2+dfsg-1) ... Setting up r-cran-backports (1.5.0-2) ... Setting up r-cran-deriv (4.1.6-1) ... Setting up r-cran-mathjaxr (1.6-0-1) ... Setting up python3-kubernetes (30.1.0-2) ... Setting up python3-pbsuite-utils (15.8.24+dfsg-8) ... Setting up libcgi-fast-perl (1:2.17-1) ... Setting up r-cran-rjags (1:4-16-1) ... Setting up r-cran-processx (3.8.6-1) ... Setting up freecontact (1.0.21-14) ... Setting up plasmidomics (0.2.0-10) ... Setting up r-cran-slam (0.1-55-1) ... Setting up r-cran-gsl (2.1-8-1+b1) ... Setting up gatb-core (1.4.2+dfsg-13+b4) ... Setting up r-cran-mime (0.12-2) ... Setting up liblrdf0:amd64 (0.6.1-4+b2) ... Setting up r-cran-qap (0.1-2-1) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up python3.13-dev (3.13.2-2) ... Setting up r-cran-praise (1.0.0-4) ... Setting up r-cran-truncnorm (1.0-9-2) ... Setting up r-cran-pan (1.9-1) ... Setting up r-cran-vipor (0.4.7-1) ... Setting up python3-tables-lib (3.10.2-2+b1) ... Setting up r-cran-gmp (0.7-5-1) ... Setting up r-cran-generics (0.1.3-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up yanosim (0.1-6) ... Setting up r-cran-base64enc (0.1-3-3) ... Setting up r-cran-beeswarm (0.4.0-1+b1) ... Setting up r-cran-iterators (1.0.14-1) ... Setting up r-cran-spatial (7.3-18-1) ... Setting up r-cran-fontliberation (0.1.0+dfsg-6) ... Setting up libmoo-perl (2.005005-1) ... Setting up r-cran-abind (1.4-8-1) ... Setting up atropos (1.1.32+dfsg-2+b2) ... Setting up r-cran-s2 (1.1.7-1) ... Setting up apache2 (2.4.63-1) ... Enabling module mpm_event. Enabling module authz_core. Enabling module authz_host. Enabling module authn_core. Enabling module auth_basic. Enabling module access_compat. Enabling module authn_file. Enabling module authz_user. Enabling module alias. Enabling module dir. Enabling module autoindex. Enabling module env. Enabling module mime. Enabling module negotiation. Enabling module setenvif. Enabling module filter. Enabling module deflate. Enabling module status. Enabling module reqtimeout. Enabling conf charset. Enabling conf localized-error-pages. Enabling conf other-vhosts-access-log. Enabling conf security. Enabling conf serve-cgi-bin. Enabling site 000-default. info: Executing deferred 'a2enconf javascript-common' for package javascript-common Enabling conf javascript-common. Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Created symlink '/etc/systemd/system/multi-user.target.wants/apache2.service' → '/usr/lib/systemd/system/apache2.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/apache-htcacheclean.service' → '/usr/lib/systemd/system/apache-htcacheclean.service'. Setting up r-cran-digest (0.6.37-1) ... Setting up scrappie (1.4.2-8+b7) ... Setting up r-cran-ape (5.8-1-1) ... Setting up r-cran-sfsmisc (1.1-20-1) ... Setting up r-cran-yaml (2.3.10-1) ... Setting up python3-pomegranate (0.15.0-1+b1) ... Setting up bio-eagle (2.4.1-3+b3) ... Setting up r-cran-ica (1.0-3-1) ... Setting up libpbbam2.4.0:amd64 (2.4.0+dfsg-1+b4) ... Setting up r-cran-lambda.r (1.2.4-2) ... Setting up r-cran-webfakes (1.3.2-1) ... Setting up r-cran-rann (2.6.2-1) ... Setting up r-bioc-protgenerics (1.38.0-2) ... Setting up texlive-science (2024.20250309-2) ... Setting up r-cran-gower (1.0.2-1) ... Setting up bcftools (1.21-1) ... Setting up python3-s3transfer (0.11.2-2) ... Setting up r-cran-evaluate (1.0.3-1) ... Setting up r-cran-docopt (0.7.1-2) ... Setting up r-cran-triebeard (0.4.1-1) ... Setting up r-cran-dbi (1.2.3-1) ... Setting up r-cran-bigmemory (4.6.4-1) ... Setting up r-cran-timedate (4041.110-1) ... Setting up uncalled (2.3+ds-3+b3) ... Setting up libnetcdf22:amd64 (1:4.9.3-1) ... Setting up r-cran-highr (0.11+dfsg-1) ... Setting up r-cran-foreach (1.5.2-1) ... Setting up r-cran-bayestestr (0.15.2-1) ... Setting up r-cran-prettyunits (1.2.0-1) ... Setting up r-cran-fansi (1.0.6-1) ... Setting up segemehl (0.3.4-5+b1) ... Setting up r-cran-fastica (1.2-7-1) ... Setting up r-cran-cardata (3.0.5-1) ... Setting up libstaden-read14t64:amd64 (1.15.0-1.1+b2) ... Setting up r-cran-pcict (0.5-4.4-1) ... Setting up pizzly (0.37.3+ds-9) ... Setting up libmaven-archiver-java (3.6.2-1) ... Setting up r-cran-mass (7.3-65-1) ... Setting up r-cran-logspline (2.1.22-1) ... Setting up libball1.5 (1.5.0+git20180813.37fc53c-11+b6) ... Setting up r-cran-sendmailr (1.4-0-1) ... Setting up r-cran-rsolnp (1.16+dfsg-4) ... Setting up r-cran-checkmate (2.3.2-1) ... Setting up python3-h5py-serial (3.13.0-1+b1) ... Setting up proj-bin (9.6.0-1) ... Setting up python3-msal-extensions (1.3.1-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up r-cran-cairo (1.6-2-1) ... Setting up r-cran-acepack (1.6.1-1) ... Setting up r-cran-mclust (6.1.1-1) ... Setting up python3-cwl-utils (0.37-1) ... Setting up r-cran-dicedesign (1.10-1) ... Setting up metabat (2.15-4+b1) ... Setting up texlive-latex-extra (2024.20250309-2) ... Setting up libqmi-proxy (1.35.95-2) ... Setting up python3-ipywidgets (8.1.5-6) ... /usr/lib/python3/dist-packages/ipywidgets/widgets/tests/test_traits.py:61: SyntaxWarning: invalid escape sequence '\.' 'var(--my-color-\.)', # CSS variable with escaped characters Setting up python3-yappi (1.6.10-2+b1) ... Setting up r-cran-setrng (2024.2-1-1) ... Setting up r-cran-packrat (0.9.2-1) ... Setting up seer (1.1.4-8+b1) ... Setting up libmodule-runtime-conflicts-perl (0.003-2) ... Setting up r-cran-nanoarrow (0.6.0-1) ... Setting up microbiomeutil (20101212+dfsg1-6) ... Setting up r-cran-snow (1:0.4.4-2) ... Setting up r-cran-sm (2.2-6.0-1) ... Setting up r-cran-truncdist (1.0-2-4) ... Setting up python3-tables (3.10.2-2) ... Setting up r-cran-gtools (3.9.5-1) ... Setting up r-cran-svunit (1.0.6-2) ... Setting up r-cran-mapdata (2.3.1-1) ... Setting up python3-parsl (2025.01.13+ds-1) ... Setting up r-cran-collapse (2.1.0-1) ... Setting up r-cran-kernlab (0.9-33-1) ... Setting up r-cran-energy (1.7-12-1) ... Setting up r-cran-bdsmatrix (1.3-7-1) ... Setting up r-cran-data.table (1.17.0+dfsg-1) ... Setting up r-cran-xopen (1.0.1+dfsg-1) ... Setting up r-cran-glue (1.8.0-1) ... Setting up r-cran-foreign (0.8.88-1) ... Setting up r-cran-prabclus (2.3-4-1) ... Setting up r-cran-gam (1.22-5-1) ... Setting up r-cran-fracdiff (1.5-3-1) ... Setting up r-cran-writexl (1.5.2-1) ... Setting up r-cran-tensora (0.36.2.1-1) ... Setting up libmime-tools-perl (5.515-1) ... Setting up r-cran-bit (4.6.0+dfsg-1) ... Setting up r-cran-pki (0.1-14-1) ... Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Setting up r-cran-ff (4.5.2+ds-1) ... Setting up r-cran-zeallot (0.1.0-3) ... Setting up r-cran-xtable (1:1.8-4-2) ... Setting up rna-star (2.7.11b+dfsg-2+b1) ... Setting up r-cran-polyclip (1.10-7-1) ... Setting up r-cran-clue (0.3-66-1) ... Setting up libtest-files-perl (0.26-1) ... Setting up r-cran-cli (3.6.4-1) ... Setting up bamkit (0.0.1+git20170413.ccd079d-3) ... Setting up r-cran-rbibutils (2.3-1) ... Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... Setting up r-cran-dotcall64 (1.2-1) ... Setting up r-cran-bitops (1.0-9-1) ... Setting up r-cran-httpcode (0.3.0-2) ... Setting up r-bioc-biocversion (3.20.0-2) ... Setting up r-cran-rprojroot (2.0.4-2) ... Setting up libclass-load-perl (0.25-2) ... Setting up r-cran-fnn (1.1.4.1-1) ... Setting up libavformat61:amd64 (7:7.1.1-1+b1) ... Setting up r-cran-mlbench (2.1-6-1) ... Setting up r-cran-bit64 (4.6.0-1-1) ... Setting up python3-biomaj3-process (3.0.19-3) ... Setting up r-cran-xmlparsedata (1.0.5-2) ... Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... Setting up r-cran-enrichwith (0.3.1+dfsg-2) ... Setting up gcc (4:14.2.0-1) ... Setting up r-cran-progressr (0.15.1-1) ... Setting up r-cran-dichromat (1:2.0-0.1-1) ... Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... Setting up libgeotiff5:amd64 (1.7.4-1) ... Setting up tiddit (3.6.1+dfsg-2+b1) ... Setting up r-cran-hsaur3 (1.0-15-1) ... Setting up samtools (1.21-1) ... Setting up r-cran-pwr (1.3-0+dfsg-1) ... Setting up r-cran-robumeta (2.1-1) ... Setting up sniffles (2.6.0-1) ... Setting up r-cran-deldir (2.0-4-1) ... Setting up python3-vcf (0.6.8+git20170215.476169c-11+b1) ... Setting up libpoppler-cpp2:amd64 (25.03.0-2) ... Setting up libblasr5.3.5:amd64 (5.3.5+dfsg-9+b2) ... Setting up r-cran-renv (1.1.2-1) ... Setting up hdf5-tools (1.14.5+repack-3) ... Setting up r-cran-goftest (1.2-3-1+b1) ... Setting up r-cran-randomforest (4.7-1.2-1) ... Setting up r-cran-ellipse (0.5.0-1) ... Setting up qiime (2024.5.0-1) ... Setting up r-cran-admisc (0.37-1) ... Setting up r-cran-shape (1.4.6.1-1) ... Setting up texlive-bibtex-extra (2024.20250309-2) ... Setting up python3-msrest (0.6.21-5) ... Setting up r-cran-askpass (1.2.1-1) ... Setting up r-cran-fastmap (1.2.0-1) ... Setting up r-cran-png (0.1-8-1+b1) ... Setting up salmon (1.10.2+ds1-1+b4) ... Setting up r-cran-sodium (1.4.0+dfsg-1) ... Setting up r-cran-r.methodss3 (1.8.2-1) ... Setting up bcalm (2.2.3-5+b3) ... Setting up r-bioc-biobase (2.66.0-2) ... Setting up libkrb5-dev:amd64 (1.21.3-5) ... Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... Setting up r-cran-mnormt (2.1.1-2) ... Setting up r-cran-spacefillr (0.4.0-1) ... Setting up r-cran-corrplot (0.95-1) ... Setting up r-cran-rnetcdf (2.9-2-1) ... Setting up r-cran-rstudioapi (0.17.1-1) ... Setting up r-cran-rose (0.0-4-2) ... Setting up libarray-compare-perl (3.0.8-1) ... Setting up r-cran-pkgconfig (2.0.3-2) ... Setting up stringtie (2.2.1+ds-3+b1) ... Setting up libspecio-perl (0.50-1) ... Setting up r-cran-mapproj (1.2.11-1) ... Setting up r-cran-getopt (1.20.4-1) ... Setting up r-cran-quickjsr (1.6.0-1) ... Setting up liblist-someutils-xs-perl:amd64 (0.58-3+b3) ... Setting up r-cran-linprog (0.9-4-1) ... Setting up fitgcp (0.0.20150429-5) ... Setting up r-cran-sp (1:2.2-0+dfsg-1) ... Setting up r-cran-utf8 (1.2.4-1) ... Setting up r-cran-brew (1.0-10-1) ... Setting up liblist-allutils-perl (0.19-1) ... Setting up stacks (2.68+dfsg-2) ... Setting up mindthegap (2.3.0-4+b1) ... Setting up r-cran-colorspace (2.1-1+dfsg-1) ... Setting up r-cran-parallelly (1.42.0-1) ... Setting up libgl1:amd64 (1.7.0-1+b2) ... Setting up r-cran-rcsdp (0.1.57.5-1) ... Setting up libqt6gui6:amd64 (6.8.2+dfsg-5+b1) ... Setting up coinor-cbc (2.10.12+ds-1) ... Setting up python3-cyvcf2 (0.31.1-2+b3) ... Setting up r-base-html (4.4.3-1) ... Setting up r-cran-warp (0.2.1-1) ... Setting up r-cran-tsne (0.1-3.1-1) ... Setting up r-cran-stringi (1.8.4-1+b1) ... Setting up libamdhip64-5 (5.7.1-5+b1) ... Setting up r-cran-elliptic (1.4-0-2) ... Setting up r-cran-spdata (2.3.4-1) ... Setting up r-cran-rex (1.2.1-1) ... Setting up r-cran-hwriter (1.3.2.1-1) ... Setting up r-cran-swagger (5.17.14.1-1) ... Setting up r-cran-markdown (1.13-1) ... Setting up r-cran-gitcreds (0.1.2-1) ... Setting up r-cran-stringdist (0.9.15-1) ... Setting up r-cran-leaps (3.2-1) ... Setting up python3-jsonschema (4.19.2-6) ... Setting up r-cran-s7 (0.2.0-1+b1) ... Setting up va-driver-all:amd64 (2.22.0-3) ... Setting up r-cran-plotrix (3.8-4-1) ... Setting up r-cran-nnls (1.6-1) ... Setting up r-cran-expint (0.1-8-1) ... Setting up ataqv (1.3.1+ds-2+b2) ... Setting up plip (2.4.0+dfsg-2) ... Setting up r-cran-sjlabelled (1.2.0-1) ... Setting up r-bioc-rots (1.34.0-2) ... Setting up r-cran-cpp11 (0.5.2-1) ... Setting up r-cran-mvtnorm (1.3-3-1) ... Setting up libglut3.12:amd64 (3.4.0-4) ... Setting up r-cran-optimx (2024-12.2-1) ... Setting up r-cran-sitmo (2.0.2-1+b1) ... Setting up r-cran-segmented (2.1-4-1) ... Setting up r-cran-plyr (1.8.9-1) ... Setting up r-cran-rcolorbrewer (1.1-3-1) ... Setting up r-cran-ini (0.3.1-2) ... Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... Setting up r-cran-isoband (0.2.7-1) ... Setting up r-cran-stabledist (0.7-2-1) ... Setting up python3-git (3.1.44-1) ... Setting up r-cran-runit (0.4.33-1) ... Setting up r-cran-futile.logger (1.4.3-4) ... Setting up python3-dev (3.13.2-2) ... Setting up r-cran-ucminf (1.2.2-1) ... Setting up r-cran-diagram (1.6.5-2) ... Setting up r-cran-scatterplot3d (0.3-44-1) ... Setting up r-cran-pingr (2.0.5-1) ... Setting up r-cran-multcompview (0.1-10-1) ... Setting up jellyfish (2.3.1-4+b1) ... Setting up r-cran-waldo (0.6.1-2) ... Setting up minia (3.2.6-4+b3) ... Setting up dotter (4.44.1+dfsg-7.1+b3) ... Setting up libparallel-forkmanager-perl (2.03-1) ... Setting up python3-h5py (3.13.0-1) ... Setting up r-bioc-limma (3.62.2+dfsg-1) ... Setting up python3-biomaj3 (3.1.24-2) ... Setting up r-cran-hypergeo (1.2-13-4) ... Setting up megadepth (1.2.0-4+b1) ... Setting up libpbseq:amd64 (5.3.5+dfsg-9+b2) ... Setting up maqview (0.2.5-12) ... Setting up r-bioc-hilbertvis (1.64.0-2) ... Setting up r-cran-irace (4.2.0-1) ... Setting up r-cran-gtable (0.3.6+dfsg-1) ... Setting up r-cran-pscl (1.5.9-1) ... Setting up r-cran-rmysql (0.11.0-1) ... Setting up r-cran-flexmix (2.3-20-1) ... Setting up tklib (0.9-1) ... Setting up r-cran-zoo (1.8-13-1) ... Setting up nanosv (1.2.4+git20190409.c1ae30c-7) ... Setting up libavfilter10:amd64 (7:7.1.1-1+b1) ... Setting up r-cran-geosphere (1.5-20-1) ... Setting up r-cran-pander (0.6.6+dfsg-1) ... Setting up libgenometools0t64 (1.6.5+ds-2.2) ... Setting up libxml-simple-perl (2.25-2) ... Setting up r-cran-units (0.8-7+dfsg-1) ... Setting up r-cran-later (1.4.1+dfsg-1) ... Setting up r-cran-matrix (1.7-3-1) ... Setting up r-cran-circlize (0.4.16+dfsg-1) ... Setting up libpwizlite3t64:amd64 (3.0.8-1+b2) ... Setting up r-cran-spatstat.sparse (3.1-0-1) ... Setting up r-cran-here (1.0.1-2) ... Setting up r-bioc-mergeomics (1.34.0-2) ... Setting up r-cran-doparallel (1.0.17-1) ... Setting up python3-boto3 (1.37.9-1) ... Setting up r-cran-magic (1.6-1-1) ... Setting up libxml-libxslt-perl:amd64 (2.003000-2+b1) ... Setting up libglew2.2:amd64 (2.2.0-4+b2) ... Setting up r-cran-htmltools (0.5.8.1-1) ... Setting up fastqtl (2.184+v7+dfsg-4+b3) ... Setting up genometools (1.6.5+ds-2.2) ... Setting up python3-pybigwig (0.3.23+dfsg-1+b3) ... Setting up r-cran-tinytex (0.56-1) ... Setting up r-cran-irlba (2.3.5.1-4) ... Setting up r-bioc-tximport (1.34.0+dfsg-2) ... Setting up r-cran-urltools (1.7.3+dfsg-2) ... Setting up r-cran-apcluster (1.4.13-1) ... Setting up r-cran-kernsmooth (2.23-26-1) ... Setting up r-cran-knitr (1.50+dfsg-1) ... Setting up r-cran-rcpptoml (0.2.3+dfsg-1) ... Setting up zutty (0.16.2.20241020+dfsg1-1) ... update-alternatives: using /usr/bin/zutty to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode Setting up r-cran-cba (0.2-25-1) ... Setting up r-cran-blockmodeling (1.1.5-1) ... Setting up r-cran-mgcv (1.9-1-1) ... Setting up g++ (4:14.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up r-cran-memisc (0.99.31.8.2+dfsg-1) ... Setting up libpackage-deprecationmanager-perl (0.18-1) ... Setting up r-cran-plotmo (3.6.4-1) ... Setting up r-cran-chk (0.10.0-1) ... Setting up r-bioc-dnacopy (1.80.0-2) ... Setting up r-cran-robustbase (0.99-4-1-1) ... Setting up r-cran-rpostgresql (0.7-7+dfsg-1) ... Setting up r-cran-metadat (1.2-0-2) ... Setting up r-cran-distr (2.9.7+dfsg-1) ... Setting up umis (1.0.9-2+b1) ... Setting up r-cran-dbscan (1.2.2+ds-2) ... Setting up r-cran-domc (1.3.8-1) ... Setting up lumpy-sv (0.3.1+dfsg-7+b1) ... Setting up r-cran-lobstr (1.1.2-1) ... Setting up libqt6network6:amd64 (6.8.2+dfsg-5+b1) ... Setting up libsimbody3.7:amd64 (3.7+dfsg-4) ... Setting up r-cran-powerlaw (1.0.0-1) ... Setting up r-cran-cachem (1.1.0-1) ... Setting up r-bioc-wrench (1.24.0+dfsg-2) ... Setting up r-cran-lmtest (0.9.40-1) ... Setting up rsem (1.3.3+dfsg-3+b1) ... Setting up r-cran-sass (0.4.9+dfsg-1) ... Setting up r-cran-tfmpvalue (0.0.9-1) ... Setting up r-cran-rcpproll (0.3.1-1) ... Setting up r-cran-lhs (1.2.0-1) ... Setting up x11-utils (7.7+7) ... Setting up libtabixpp0t64:amd64 (1.1.2-2.1+b1) ... Setting up r-bioc-biocbaseutils (1.8.0+dfsg-2) ... Setting up libdevel-overloadinfo-perl (0.007-1) ... Setting up build-essential (12.12) ... Setting up r-bioc-preprocesscore (1.68.0+ds-2) ... Setting up texlive-xetex (2024.20250309-1) ... Setting up discosnp (1:2.6.2-4+b2) ... Setting up r-cran-bbmle (1.0.25.1-1) ... Setting up libglx-dev:amd64 (1.7.0-1+b2) ... Setting up spades (4.0.0+dfsg1-2) ... Setting up r-cran-rcppcctz (0.2.13-1) ... Setting up r-cran-catools (1.18.3-1) ... Setting up r-cran-rtsne (0.17-1) ... Setting up libclass-load-xs-perl (0.10-2+b4) ... Setting up r-cran-rcpparmadillo (14.4.0-1-1) ... Setting up r-cran-rmpfr (1.0-0-1) ... Setting up r-cran-pcapp (2.0-5-1) ... Setting up r-cran-hdf5r (1.3.12+dfsg-1) ... Setting up r-bioc-iranges (2.40.1-2) ... Setting up r-cran-dqrng (0.3.2+dfsg-1) ... Setting up r-cran-clustergeneration (1.3.8-1) ... Setting up r-bioc-ctc (1.80.0-2) ... Setting up python3-picopore (1.2.0-3) ... Setting up python3-msrestazure (0.6.4-4) ... Setting up libatk-wrapper-java (0.40.0-3) ... Setting up r-cran-cvst (0.2-3-1) ... Setting up r-bioc-assorthead (1.0.1+ds-2) ... Setting up libgtk-4-common (4.18.2+ds-1) ... Setting up pbbamtools (2.4.0+dfsg-1+b4) ... Setting up r-cran-tzdb (0.5.0-1) ... Setting up r-cran-tsp (1.2-4-1) ... Setting up r-cran-reticulate (1.41.0.1+dfsg-1) ... Setting up r-cran-statnet.common (4.11.0-1) ... Setting up r-cran-parameters (0.24.2-2) ... Setting up pyensembl (2.3.13-2) ... Setting up r-cran-globals (0.16.3-1) ... Setting up libparams-validate-perl:amd64 (1.31-2+b3) ... Setting up r-cran-argparse (2.2.5+dfsg-1) ... Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... Setting up libvdpau-va-gl1:amd64 (0.4.2-2) ... Setting up r-cran-sessioninfo (1.2.3-1) ... Setting up r-bioc-seqlogo (1.72.0+dfsg-2) ... Setting up r-cran-metafor (4.8-0-1) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up r-cran-spam (2.11-1-1) ... Setting up r-cran-unitizer (1.4.22-1) ... Setting up libqmi-utils (1.35.95-2) ... Setting up r-cran-restfulr (0.0.15-1) ... Setting up r-bioc-biocneighbors (2.0.1+ds-2) ... Setting up gstreamer1.0-libav:amd64 (1.26.0-1) ... Setting up r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... Setting up r-cran-optparse (1.7.5-1) ... Setting up python3-htseq (2.0.9+dfsg-1+b2) ... Setting up r-cran-gdata (3.0.1-1) ... Setting up libgl-dev:amd64 (1.7.0-1+b2) ... Setting up r-cran-rcppgsl (0.3.13-1+b1) ... Setting up r-cran-distory (1.4.5-1) ... Setting up r-cran-vctrs (0.6.5-1) ... Setting up r-cran-webutils (1.2.2-1) ... Setting up tombo (1.5.1-7+b2) ... Setting up r-cran-brobdingnag (1.2-9-1) ... Setting up libgtk-3-common (3.24.49-2) ... Setting up r-cran-splines2 (0.5.4-1) ... Setting up r-cran-polycor (0.8-1-1) ... Setting up r-cran-lamw (2.2.4-1) ... Setting up staden-io-lib-utils (1.15.0-1.1+b2) ... Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... Setting up r-cran-bbmisc (1.13-1) ... Setting up r-cran-mitools (2.4-2) ... Setting up r-bioc-graph (1.84.1-1) ... Setting up r-cran-hunspell (3.0.5+dfsg-1) ... Setting up libspatialite8t64:amd64 (5.1.0-3+b2) ... Setting up libgs10:amd64 (10.05.0~dfsg-1) ... Setting up r-cran-pillar (1.10.1+dfsg-1) ... Setting up r-cran-stanheaders (2.32.10-1) ... Setting up bioperl (1.7.8-1) ... Setting up staden (2.0.0+b11-5) ... Setting up r-cran-extradistr (1.10.0-1) ... Setting up gsettings-desktop-schemas (48.0-1) ... Setting up libhdf5-hl-cpp-310:amd64 (1.14.5+repack-3) ... Setting up r-cran-fontquiver (0.2.1-4) ... Setting up r-cran-ellipsis (0.3.2-2) ... Setting up r-cran-rcppannoy (0.0.22-1) ... Setting up r-cran-ncdf4 (1.23-1+b1) ... Setting up centrifuge (1.0.4.2-1) ... Setting up r-cran-minqa (1.2.8-1) ... Setting up r-cran-filehash (2.4-6-1) ... Setting up glib-networking-services (2.80.1-1) ... Setting up r-cran-rngtools (1.5.2-1) ... Setting up r-bioc-rbgl (1.82.0+dfsg-2) ... Setting up r-cran-itertools (0.1-3-3) ... Setting up r-cran-ratelimitr (0.4.1-2) ... Setting up r-cran-reshape (0.8.9-1) ... Setting up libhdf5-hl-fortran-310:amd64 (1.14.5+repack-3) ... Setting up r-cran-openssl (2.3.2+dfsg-1) ... Setting up gedit-common (48.1-2) ... Setting up r-cran-actuar (3.3-5-1) ... Setting up r-cran-base64url (1.4-2+b1) ... Setting up r-bioc-affyio (1.76.0-2) ... Setting up r-cran-libcoin (1.0-10-1) ... Setting up r-cran-fauxpas (0.5.2+dfsg-1) ... Setting up r-cran-fields (16.3.1-1) ... Setting up r-bioc-biocviews (1.74.0-2) ... Setting up btllib-tools (1.4.10+dfsg-1) ... Setting up r-cran-repr (1.1.7-1) ... Setting up libucx0:amd64 (1.18.1+ds-2+b1) ... Setting up python3-pybedtools (0.10.0-4+b1) ... Setting up r-bioc-hsmmsinglecell (1.26.0-2) ... Setting up r-cran-misctools (0.6-28-1) ... Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... Setting up r-cran-stringr (1.5.1-1) ... Setting up bamclipper (1.0.0-3) ... Setting up r-cran-class (7.3-23-1) ... Setting up r-bioc-biocparallel (1.40.0-2) ... Setting up r-cran-performance (0.13.0-2) ... Setting up qt6-qpa-plugins:amd64 (6.8.2+dfsg-5+b1) ... Setting up r-cran-prediction (0.3.18-1) ... Setting up python3-cgelib (0.7.3-3) ... Setting up r-cran-distributional (0.5.0-1) ... Setting up r-cran-modelmetrics (1.2.2.2-1+b1) ... Setting up ltrsift (1.0.2-10) ... Setting up r-cran-googlevis (0.7.3+dfsg-1) ... Setting up r-cran-callr (3.7.6-1) ... Setting up r-cran-openxlsx (4.2.8-1) ... Setting up r-cran-ordinal (2023.12-4.1-1) ... Setting up r-cran-estimatr (1.0.6-1) ... Setting up r-cran-mclogit (0.9.6-2) ... Setting up r-cran-vioplot (0.5.1-1) ... Setting up genomethreader (1.7.3+dfsg-10+b1) ... Setting up r-cran-selectr (0.4-2-2) ... Setting up r-cran-genabel (1.8-0-7) ... Setting up pyvcf (0.6.8+git20170215.476169c-11) ... Setting up python3-pulp (2.7.0+dfsg-4) ... /usr/lib/python3/dist-packages/pulp/apis/xpress_api.py:325: SyntaxWarning: invalid escape sequence '\ ' otherwise be interpreted by the Tcl shell: \ $ " [ Setting up r-cran-matchit (4.7.1-1) ... Setting up r-bioc-edger (4.4.2+dfsg-1) ... Setting up r-cran-matrixmodels (0.5-3-1) ... Setting up r-bioc-biomformat (1.34.0+dfsg-2) ... Setting up libmoose-perl:amd64 (2.2207-1+b3) ... Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... Setting up r-cran-venndiagram (1.7.3-1) ... Setting up r-cran-ks (1.14.3-1) ... Setting up r-cran-desc (1.4.3-1) ... Setting up r-cran-timeseries (4041.111-1) ... Setting up r-cran-nanotime (0.3.11-1) ... Setting up libbio-scf-perl (1.03-7+b3) ... Setting up fastaq (3.17.0-9) ... Setting up r-cran-xml2 (1.3.8-1) ... Setting up r-cran-mda (0.5-5-1) ... Setting up libqt6qml6:amd64 (6.8.2+dfsg-6) ... Setting up python3-biomaj3-daemon (3.0.24-3) ... Setting up libqt6opengl6:amd64 (6.8.2+dfsg-5+b1) ... Setting up r-cran-sparsevctrs (0.2.0-1+b1) ... Setting up r-cran-munsell (0.5.1-1) ... Setting up r-cran-tibble (3.2.1+dfsg-3) ... Setting up r-cran-logcondens (2.1.8-1) ... Setting up dvisvgm (3.4.4+ds-1) ... Setting up r-cran-clock (0.7.2-1) ... Setting up r-cran-gridsvg (1.7-5-1) ... Setting up r-cran-sandwich (3.1-1-1) ... Setting up r-cran-proc (1.18.5-1) ... Setting up blasr (5.3.5+dfsg-7+b1) ... Setting up libwildmagic5:amd64 (5.17+cleaned1-7+b2) ... Setting up r-cran-dorng (1.8.6.1-1) ... Setting up r-cran-fontawesome (0.5.3-1) ... Setting up r-cran-survival (3.8-3-1) ... Setting up r-cran-igraph (2.1.4-1) ... Setting up r-cran-cyclocomp (1.1.1-1) ... Setting up aegean (0.16.0+dfsg-4) ... Setting up libgtkglext1:amd64 (1.2.0-11+b3) ... Setting up kissplice (2.6.7-1) ... Setting up r-cran-lavaan (0.6.19-1) ... Setting up r-cran-xts (0.14.1-1) ... Setting up r-bioc-dirichletmultinomial (1.48.0-2) ... Setting up r-cran-lintr (3.2.0-1) ... Setting up r-cran-qpdf (1.3.4+dfsg-2+b1) ... Setting up r-cran-brglm2 (0.9.2+dfsg-1) ... Setting up libsimtkmolmodel3.1t64:amd64 (3.1.0-4.1+b3) ... Setting up python3-nbformat (5.9.1-1) ... Setting up r-bioc-biocio (1.16.0+dfsg-2) ... Setting up r-cran-expm (1.0-0-1) ... Setting up picopore (1.2.0-3) ... Setting up r-cran-survey (4.4-2-2) ... Setting up r-cran-r.oo (1.27.0-1) ... Setting up r-cran-rdpack (2.6.3-1) ... Setting up python3-opengl (3.1.9+dfsg-1) ... /usr/lib/python3/dist-packages/OpenGL/GL/AMD/vertex_shader_tessellator.py:30: SyntaxWarning: invalid escape sequence '\ ' |\ |\ Setting up ghostscript (10.05.0~dfsg-1) ... Setting up libcurl4-gnutls-dev:amd64 (8.13.0~rc2-1) ... Setting up r-cran-tweenr (2.0.3-1) ... Setting up python3-mofapy (1.6.1+dfsg-15) ... /usr/lib/python3/dist-packages/mofapy/core/entry_point.py:44: SyntaxWarning: invalid escape sequence '\/' ### | \/ |/ _ \| ___/ \ ### /usr/lib/python3/dist-packages/mofapy/core/nongaussian_nodes.py:147: SyntaxWarning: invalid escape sequence '\p' p(y|x) \prop gamma(x) * e^{-gamma(x)} (1) /usr/lib/python3/dist-packages/mofapy/core/utils.py:178: SyntaxWarning: invalid escape sequence '\m' """Diagonal of :math:`\mathrm A\mathrm B^\intercal`. Setting up r-cran-ade4 (1.7-23-1) ... Setting up r-cran-future (1.34.0+dfsg-1) ... Setting up libqt6qmlmodels6:amd64 (6.8.2+dfsg-6) ... Setting up r-cran-vcd (1:1.4-13-1) ... Setting up r-bioc-pcamethods (1.98.0-2) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up r-cran-forcats (1.0.0-1) ... Setting up flye (2.9.5+dfsg-1) ... Setting up r-cran-geometry (0.5.2-1) ... Setting up libatk-wrapper-java-jni:amd64 (0.40.0-3+b3) ... Setting up libvibrant6t64:amd64 (6.1.20170106+dfsg2-5) ... Setting up r-cran-marginaleffects (0.25.0-1) ... Setting up r-cran-bench (1.1.4-1) ... Setting up r-cran-cmprsk (2.2-12-1) ... Setting up r-cran-fpc (2.2-13-1) ... Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... Setting up r-cran-network (1.19.0-1) ... Setting up r-cran-psych (2.4.12-1) ... Setting up r-cran-strucchange (1.5-4-1) ... Setting up libqt6widgets6:amd64 (6.8.2+dfsg-5+b1) ... Setting up python3-pymummer (0.11.0-5) ... Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... Setting up bio-tradis (1.4.5+dfsg2-2) ... Setting up velvetoptimiser (2.2.6-5) ... Setting up pbdagcon (0.3+git20180411.c14c422+dfsg-9) ... Setting up r-cran-leidenbase (0.1.32-1) ... Setting up r-cran-reshape2 (1.4.4-2) ... Setting up r-cran-interp (1.1-6-1) ... Setting up r-cran-av (0.9.0+dfsg-1+b1) ... Setting up r-cran-emmeans (1.10.7+dfsg-1) ... Setting up r-cran-rsvd (1.0.5-1) ... Setting up r-cran-slider (0.3.2-1) ... Setting up libbio-coordinate-perl (1.7.1-4) ... Setting up r-cran-httr2 (1.1.1-1) ... Setting up libqt6qmlworkerscript6:amd64 (6.8.2+dfsg-6) ... Setting up libqt6svg6:amd64 (6.8.2-3) ... Setting up libodsstream0:amd64 (0.9.7-1+b2) ... Setting up r-cran-future.apply (1.11.3+dfsg-1) ... Setting up r-cran-sna (2.8-1) ... Setting up r-cran-tmb (1.9.17-1) ... Setting up libqt5gui5t64:amd64 (5.15.15+dfsg-4+b1) ... Setting up python3-biom-format (2.1.16-1+b5) ... Setting up libgstreamer-gl1.0-0:amd64 (1.26.0-1) ... Setting up r-cran-systemfonts (1.2.1-1) ... Setting up libqt6waylandclient6:amd64 (6.8.2-3) ... Setting up libvcflib2:amd64 (1.0.12+dfsg-1) ... Setting up r-cran-ids (1.0.1-2) ... Setting up r-cran-inum (1.0-5-1) ... Setting up r-cran-timechange (0.3.0-1) ... Setting up r-cran-emdbook (1.3.13+ds-1) ... Setting up r-cran-th.data (1.1-3-1) ... Setting up r-cran-rsconnect (1.3.4-1) ... Setting up r-cran-phangorn (2.12.1+dfsg-1) ... Setting up r-cran-kmi (0.5.5-2) ... Setting up qt6-svg-plugins:amd64 (6.8.2-3) ... Setting up r-cran-httr (1.4.7+dfsg-1) ... Setting up python3-skbio (0.6.2-4+b2) ... Setting up r-cran-snakecase (0.11.1-1) ... Setting up q2-types (2024.5.0-1) ... Setting up r-cran-irdisplay (1.1-1) ... Setting up libgtk-3-0t64:amd64 (3.24.49-2) ... Setting up r-bioc-affy (1.84.0-2) ... Setting up r-cran-gridextra (2.3-3) ... Setting up r-cran-hms (1.1.3-1) ... Setting up r-cran-ddrtree (0.1.5-2) ... Setting up libhdf5-dev (1.14.5+repack-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up r-cran-scales (1.3.0-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up r-cran-memoise (2.0.1-1) ... Setting up r-cran-lava (1.8.1+dfsg-1) ... Setting up r-cran-covr (3.6.4+dfsg-1) ... Setting up libglu1-mesa-dev:amd64 (9.0.2-1.1+b3) ... Setting up r-cran-promises (1.3.2+dfsg-1) ... Setting up r-cran-intergraph (2.0-4-2) ... Setting up r-cran-purrr (1.0.4-1) ... Setting up r-cran-crul (1.5.0+dfsg-1) ... Setting up r-cran-e1071 (1.7-16-1) ... Setting up r-cran-vegan (2.6-10+dfsg-1) ... Setting up r-cran-spatstat.data (3.1-6-1) ... Setting up r-cran-maxlik (1.5-2.1-1) ... Setting up r-cran-fastdummies (1.7.5-1) ... Setting up r-cran-credentials (2.0.2-1) ... Setting up r-cran-multcomp (1.4-28-1) ... Setting up r-cran-rstantools (2.4.0-1) ... Setting up r-cran-svglite (2.1.3-1+b1) ... Setting up r-cran-spacetime (1.3-3-1) ... Setting up r-cran-blob (1.2.4-1) ... Setting up r-cran-qqconf (1.3.2+dfsg-1) ... Setting up python3-plotly (5.20.0+dfsg-1) ... Setting up freebayes (1.3.9-1) ... Setting up r-cran-wikipedir (1.7.1-1) ... Setting up r-cran-urlchecker (1.0.1-2) ... Setting up r-cran-bayesfactor (0.9.12-4.7+dfsg-1) ... Setting up r-cran-seuratobject (5.0.2-1) ... Setting up libqt6svgwidgets6:amd64 (6.8.2-3) ... Setting up r-cran-spatstat.geom (3.3-6-1) ... Setting up xpore (2.1-2) ... Setting up r-cran-psychtools (2.4.2-1) ... Setting up r-bioc-xvector (0.46.0-2) ... Setting up r-cran-gbm (2.2.2-1) ... Setting up r-cran-paramhelpers (1.14.2-1) ... Setting up r-cran-earth (5.3.4-1) ... Setting up vdpau-driver-all:amd64 (1.5-3+b1) ... Setting up r-cran-pkgbuild (1.4.6-1) ... Setting up r-cran-xslt (1.5.1-1) ... Setting up at-spi2-core (2.56.0-3) ... Setting up libmmb4.0t64:amd64 (4.0.0+dfsg-5) ... Setting up r-cran-hardhat (1.4.1+dfsg-1) ... Setting up r-cran-bridgesampling (1.1-2-1) ... Setting up r-cran-rrcov (1.7-6-1) ... Setting up r-cran-lbfgsb3c (2024-3.5-1) ... Setting up r-cran-tikzdevice (0.12.6-1) ... Setting up libpeas-1.0-0:amd64 (1.36.0-3+b4) ... Setting up r-cran-parallelmap (1.5.1-1) ... Setting up r-cran-whoami (1.3.0-2) ... Setting up r-cran-pdftools (3.5.0-1) ... Setting up libgtk-4-1:amd64 (4.18.2+ds-1) ... Setting up r-cran-seriation (1.5.7-1) ... Setting up r-cran-rcppml (0.3.7-2) ... Setting up r-cran-amelia (1.8.3-1) ... Setting up libopenjfx-jni:amd64 (11.0.11+1-6) ... Setting up r-cran-dplyr (1.1.4-4) ... Setting up libgtk-4-bin (4.18.2+ds-1) ... Setting up libgedit-amtk-5-0:amd64 (5.9.1-1) ... Setting up r-cran-rspectra (0.16-2-1) ... Setting up r-cran-drr (0.0.4-2) ... Setting up r-cran-gbutils (0.5-3) ... Setting up glib-networking:amd64 (2.80.1-1) ... Setting up r-cran-cvar (0.5-2) ... Setting up r-cran-gmm (1.8-1) ... Setting up pbjelly (15.8.24+dfsg-8) ... Setting up r-cran-reformulas (0.4.0-1) ... Setting up libnamespace-autoclean-perl (0.31-1) ... Setting up r-cran-gplots (3.2.0-1) ... Setting up libqt6qmlmeta6:amd64 (6.8.2+dfsg-6) ... Setting up r-cran-rsqlite (2.3.9-1) ... Setting up r-cran-uwot (0.2.3-1) ... Setting up r-cran-webmockr (2.0.0-1) ... Setting up libqt5quick5:amd64 (5.15.15+dfsg-3) ... Setting up libqt6openglwidgets6:amd64 (6.8.2+dfsg-5+b1) ... Setting up r-cran-clubsandwich (0.5.11-1) ... Setting up libgedit-gtksourceview-300-3:amd64 (299.5.0-1) ... Setting up r-cran-spelling (2.3.1-1) ... Setting up libglut-dev:amd64 (3.4.0-4) ... Setting up libdatetime-locale-perl (1:1.41-1) ... Setting up r-cran-decor (1.0.2-1) ... Setting up r-cran-gh (1.4.1-1) ... Setting up r-cran-progress (1.2.3-1) ... Setting up q2-quality-filter (2024.5.0-1) ... Setting up ncbi-cn3d (3.0.20170106+dfsg2-5) ... update-alternatives: using /usr/bin/Cn3D-3.0 to provide /usr/bin/Cn3D (Cn3D) in auto mode Setting up libdecor-0-plugin-1-gtk:amd64 (0.2.2-2) ... Setting up r-cran-ttr (0.24.4-1) ... Setting up libqt6wlshellintegration6:amd64 (6.8.2-3) ... Setting up libwxgtk3.2-1t64:amd64 (3.2.6+dfsg-2) ... Setting up r-cran-ranger (0.17.0-1) ... Setting up r-cran-posterior (1.6.1+dfsg-1) ... Setting up deblur (1.1.1-4) ... Setting up libhandy-1-0:amd64 (1.8.3-2) ... Setting up r-cran-smcfcs (1.9.2+dfsg-2) ... Setting up r-cran-cubelyr (1.0.2-1) ... Setting up r-cran-timereg (2.0.6-1) ... Setting up r-cran-glmnet (4.1-8-1) ... Setting up r-bioc-multtest (2.62.0-2) ... Setting up q2-taxa (2024.5.0+dfsg-1) ... Setting up gstreamer1.0-gl:amd64 (1.26.0-1) ... Setting up gir1.2-gtk-4.0:amd64 (4.18.2+ds-1) ... Setting up libgspell-1-3:amd64 (1.14.0-2+b1) ... Setting up r-cran-pheatmap (1.0.12-2) ... Setting up r-cran-pkgmaker (0.32.10-1) ... Setting up r-cran-phytools (2.4-4-1) ... Setting up r-cran-lubridate (1.9.4+dfsg-1) ... Setting up r-cran-genoplotr (0.8.11+dfsg-2) ... Setting up libopenmpi40:amd64 (5.0.7-1) ... Setting up r-cran-pkgload (1.4.0-1) ... Setting up r-cran-r.utils (2.13.0-1) ... Setting up r-cran-gargle (1.5.2-1) ... Setting up libwxgtk-gl3.2-1t64:amd64 (3.2.6+dfsg-2) ... Setting up r-cran-rversions (2.1.2-1) ... Setting up r-cran-rocr (1.0-11-3) ... Setting up r-cran-webshot (0.5.5-1) ... Setting up r-cran-vroom (1.6.5-1) ... Setting up r-cran-rcarb (0.1.6+dfsg-1) ... Setting up libqt6printsupport6:amd64 (6.8.2+dfsg-5+b1) ... Setting up gamgi (0.17.5-1+b1) ... Setting up r-base-dev (4.4.3-1) ... Setting up r-cran-prodlim (2024.06.25-1) ... Setting up r-cran-fitdistrplus (1.2-2-1) ... Setting up r-cran-effectsize (1.0.0+dfsg-1) ... Setting up r-cran-sjstats (0.19.0-1) ... Setting up r-cran-rncl (0.8.7-1) ... Setting up r-cran-conflicted (1.2.0-1.1) ... Setting up r-cran-natserv (1.0.0+dfsg-1) ... Setting up r-cran-seqinr (4.2-36-1) ... Setting up q2-cutadapt (2024.5.0-1) ... Setting up r-cran-mlmetrics (1.1.3-1) ... Setting up vg (1.59.0+ds-0.1) ... Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... Setting up r-cran-etm (1.1.1-1) ... Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-4+b1) ... Setting up r-cran-ddalpha (1.3.16-1) ... Setting up r-cran-lsmeans (2.30-0-2) ... Setting up r-cran-fbasics (4041.97-1) ... Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... Setting up r-cran-ggsignif (0.6.4-1) ... Setting up libdevel-partialdump-perl (0.20-2) ... Setting up r-cran-scattermore (1.2-1) ... Setting up python3-wxgtk4.0 (4.2.2+dfsg-3+b1) ... Setting up r-cran-dimred (0.2.6-4) ... Setting up r-cran-cellranger (1.1.0-3) ... Setting up r-cran-dials (1.2.1-1) ... Setting up r-cran-r.devices (2.17.2+ds-1) ... Setting up r-cran-rentrez (1.2.3+dfsg-1) ... Setting up libgedit-tepl-6-2:amd64 (6.12.0-2+b1) ... Setting up r-cran-httpuv (1.6.15+dfsg-1) ... Setting up r-cran-worrms (0.4.3+dfsg-1) ... Setting up r-cran-rematch2 (2.1.2-2) ... Setting up r-cran-rpart (4.1.24-1) ... Setting up libqt5svg5:amd64 (5.15.15-2) ... Setting up libsoup-3.0-0:amd64 (3.6.4-3) ... Setting up gir1.2-gtk-3.0:amd64 (3.24.49-2) ... Setting up gir1.2-amtk-5:amd64 (5.9.1-1) ... Setting up hyphy-mpi (2.5.69+dfsg-1) ... Setting up libdatetime-timezone-perl (1:2.64-1+2025a) ... Setting up r-bioc-rhdf5lib (1.28.0+dfsg-2) ... Setting up r-cran-publish (2023.01.17-1) ... Setting up sfftw2 (2.1.5-7+b1) ... Setting up ncbi-tools-x11 (6.1.20170106+dfsg2-5) ... Setting up libhts-dev:amd64 (1.21+ds-1) ... Setting up r-cran-eaf (2.5.1-1) ... Setting up r-cran-purrrlyr (0.0.8-1) ... Setting up r-cran-msm (1.8.2-1) ... Setting up r-cran-spatstat.random (3.3-3-1) ... Setting up r-cran-gert (2.1.4+dfsg-1) ... Setting up libgtk-3-bin (3.24.49-2) ... Setting up ampliconnoise (1.29-15+b1) ... Setting up libvcflib-tools (1.0.12+dfsg-1) ... Setting up r-cran-ggsci (3.2.0-1) ... Setting up geoclue-2.0 (2.7.2-2) ... Setting up r-cran-modeldata (1.4.0-1) ... Setting up mapdamage (2.2.2+dfsg-1) ... Setting up r-bioc-savr (1.37.0-6) ... Setting up pycoqc (2.5.2+dfsg-4) ... Setting up njplot (2.4-9+b1) ... Setting up libadwaita-1-0:amd64 (1.7.0-1) ... Setting up r-cran-latticeextra (0.6-30-1) ... Setting up r-cran-gdtools (0.4.1-1) ... Setting up libvte-2.91-0:amd64 (0.80.0-1) ... Setting up r-cran-downlit (0.4.4-1) ... Setting up r-cran-solrium (1.2.0+dfsg-1) ... Setting up r-cran-batchjobs (1.9-1) ... Setting up r-cran-plm (2.6-5-1) ... Setting up r-bioc-rhdf5filters (1.18.1+dfsg-1) ... Setting up zenity (4.1.90-1) ... Setting up r-cran-textshaping (0.3.7-2) ... Setting up iqtree (2.0.7+dfsg-1+b2) ... Setting up libqt5help5:amd64 (5.15.15-6) ... Setting up qt5-gtk-platformtheme:amd64 (5.15.15+dfsg-4+b1) ... Setting up mmb (4.0.0+dfsg-5) ... Setting up smrtanalysis (0~20210112) ... Setting up r-cran-ipred (0.9-15-1) ... Setting up r-cran-rmariadb (1.3.3+ds-1) ... Setting up python3-emperor (1.0.4+ds-1) ... Setting up libqt5waylandclient5:amd64 (5.15.15-2) ... Setting up r-cran-nfactors (2.4.1.1-2) ... Setting up r-cran-lme4 (1.1-36-1) ... Setting up r-cran-luminescence (1.0.1-1) ... Setting up r-cran-furrr (0.3.1-1) ... Setting up treeviewx (0.5.1+git20100823.7e4d0e9-4+b4) ... Setting up libqt5quickwidgets5:amd64 (5.15.15+dfsg-3) ... Setting up r-cran-bradleyterry2 (1.1-2-2) ... Setting up r-cran-viridis (0.6.5-1) ... Setting up libqt5waylandcompositor5:amd64 (5.15.15-2) ... Setting up libavogadro2-1t64:amd64 (1.100.0-1) ... Setting up r-cran-lmertest (3.1-3-2) ... Setting up r-cran-mlmrev (1.0-8-2) ... Setting up r-bioc-metagenomeseq (1.48.1-1) ... Setting up libgssdp-1.6-0:amd64 (1.6.3-1+b3) ... Setting up r-cran-rvest (1.0.4-1) ... Setting up r-cran-testthat (3.2.3-1) ... Setting up r-cran-dtplyr (1.3.1-1) ... Setting up r-bioc-ebseq (2.4.0-2) ... Setting up libopenjfx-java (11.0.11+1-6) ... Setting up r-cran-patrick (0.3.0-1) ... Setting up r-cran-mockery (0.4.4+dfsg-1) ... Setting up r-cran-jomo (2.7-6-1) ... Setting up avogadro (1.100.0-2) ... Setting up r-cran-coin (1.4-3-1) ... Setting up r-cran-bayesfm (0.1.7-1) ... Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... Setting up r-cran-classint (0.4-11+dfsg-1) ... Setting up r-cran-plumber (1.3.0+ds-1) ... Setting up qt6-gtk-platformtheme:amd64 (6.8.2+dfsg-5+b1) ... Setting up r-cran-bslib (0.9.0+dfsg-1) ... Setting up r-cran-ragg (1.3.3-1) ... Setting up r-cran-vcr (1.6.0+dfsg-1) ... Setting up libpappsomspp0:amd64 (0.9.38-1+b2) ... Setting up r-cran-spatstat.explore (3.3-4-1) ... Setting up r-cran-rredlist (1.0.0-1) ... Setting up r-cran-ggthemes (5.1.0-1) ... Setting up libjloda-java (2.1+ds-3) ... Setting up r-cran-nmf (0.28-1) ... Setting up r-cran-readr (2.1.5-1) ... Setting up python3-pbbanana (15.8.24+dfsg-8) ... Setting up r-cran-gamm4 (0.2-6-2) ... Setting up r-cran-ggrepel (0.9.6-1) ... Setting up r-cran-officer (0.6.7+dfsg-1) ... Setting up molequeue (0.9.0-1+b3) ... Setting up r-cran-tcr (2.3.2+ds-1) ... Setting up libqt6quick6:amd64 (6.8.2+dfsg-6) ... Setting up r-cran-mets (1.3.5+dfsg-1) ... Setting up r-cran-tidyr (1.3.1-1) ... Setting up r-cran-ggdendro (0.2.0+dfsg-1) ... Setting up r-cran-rotl (3.1.0-1) ... Setting up libclipper2:amd64 (2.1.20201109-2+b3) ... Setting up r-cran-vdiffr (1.0.8-1) ... Setting up r-cran-rcmdcheck (1.4.0-3) ... Setting up r-cran-maptree (1.4-8-1) ... Setting up r-cran-recipes (1.1.0+dfsg-1) ... Setting up r-cran-rsample (1.2.1+dfsg-1) ... Setting up libqcustomplot2.1-qt6:amd64 (2.1.0+dfsg1-3.1+b5) ... Setting up r-cran-dbitest (1.8.2-1) ... Setting up libpappsomspp-widget0:amd64 (0.9.38-1+b2) ... Setting up r-cran-mutoss (0.1-13-1) ... Setting up r-cran-googledrive (2.1.1-3) ... Setting up r-cran-partykit (1.2-23-1) ... Setting up r-cran-robust (0.7-5-1) ... Setting up libpdb-redo3 (3.2.1-1) ... Setting up libgtk-4-media-gstreamer (4.18.2+ds-1) ... Setting up r-cran-roxygen2 (7.3.2-1) ... Setting up r-cran-rnexml (2.4.11+ds-1) ... Setting up r-cran-batchtools (0.9.17+dfsg-1) ... Setting up r-cran-thematic (0.1.6-1) ... Setting up q2-metadata (2024.5.0+dfsg-1) ... Setting up clustalx (2.1+lgpl-9+b1) ... Setting up libgromacs10:amd64 (2025.1-1) ... Setting up libqt5webenginecore5:amd64 (5.15.18+dfsg-2+b1) ... Setting up r-cran-googlesheets4 (1.1.1-1) ... Setting up openjfx (11.0.11+1-6) ... Setting up r-cran-ggseqlogo (0.2-1) ... Setting up apbs (3.4.1-6+b3) ... Setting up gir1.2-gtksource-300:amd64 (299.5.0-1) ... Setting up liblog-dispatch-perl (2.71-1) ... Setting up r-cran-phylobase (0.8.12-1) ... Setting up qutemol (0.4.1~cvs20081111-15+b3) ... Setting up r-bioc-decontam (1.26.0+dfsg-2) ... Setting up libqt5opengl5t64:amd64 (5.15.15+dfsg-4+b1) ... Setting up libbpp-qt2t64:amd64 (2.4.1-12+b1) ... Setting up gentle (1.9.5~alpha2+dfsg1-2) ... Setting up r-other-rajewsky-dropbead (0.3.1+git20180221.d746c6f+ds-3) ... Setting up r-cran-ggalluvial (0.12.5-2) ... Setting up r-cran-loo (2.8.0-1) ... Setting up r-bioc-qvalue (2.38.0-2) ... Setting up bandage (0.9.0-2+b1) ... Setting up r-cran-mlr (2.19.2+dfsg-1) ... Setting up libboost-mpi1.83.0 (1.83.0-4.1+b2) ... Setting up r-cran-dbplyr (2.5.0+dfsg-1) ... Setting up r-cran-ggridges (0.5.6-1) ... Setting up r-cran-fgarch (4033.92-1) ... Setting up lamarc (2.1.10.1+dfsg-7+b4) ... Setting up r-cran-psychotree (0.16-1-1) ... Setting up r-cran-rlrsim (3.1-8-1) ... Setting up r-cran-ggbeeswarm (0.7.2-1) ... Setting up r-cran-quantmod (0.4.26-1) ... Setting up openmpi-bin (5.0.7-1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up r-recommended (4.4.3-1) ... Setting up r-bioc-aroma.light (3.36.0-2) ... Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... Setting up libdatetime-perl (2:1.65-1+b2) ... Setting up r-cran-rstan (2.32.7-1) ... Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-4+b1) ... Setting up r-cran-r.cache (0.16.0-1) ... Setting up libqt5scripttools5:amd64 (5.15.15+dfsg-2) ... Setting up r-cran-arm (1.14-4-1) ... Setting up r-cran-tgp (2.4-23-1) ... Setting up r-cran-rtdists (0.11-5-1) ... Setting up r-cran-lavasearch2 (2.0.3+dfsg-1) ... Setting up density-fitness (1.1.2-1) ... Setting up r-cran-cards (0.5.1-1) ... Setting up r-cran-epi (2.59-1) ... Setting up r-cran-cowplot (1.1.3+dfsg-1) ... Setting up r-cran-sctransform (0.4.1-1) ... Setting up r-cran-ggforce (0.4.2-1) ... Setting up r-cran-ritis (1.0.0-1) ... Setting up r-cran-sdmtools (1.1-221.2-1+b1) ... Setting up r-cran-patchwork (1.3.0-1) ... Setting up r-cran-readxl (1.4.5-1) ... Setting up rasmol (2.7.6.0-3+b1) ... update-alternatives: using /usr/bin/rasmol-gtk to provide /usr/bin/rasmol (rasmol) in auto mode Setting up r-cran-dendextend (1.19.0+dfsg-1) ... Setting up r-cran-ggstats (0.7.0-2) ... Setting up avogadro-utils (1.100.0-1) ... Setting up r-cran-blme (1.0-6-1) ... Setting up r-cran-httptest2 (1.1.0+ds-2) ... Setting up libqt5designer5:amd64 (5.15.15-6) ... Setting up r-cran-ggfortify (0.4.17+dfsg-1) ... Setting up assemblytics (1.2.1+dfsg-2) ... Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... Setting up libopenms2.6.0:amd64 (2.6.0+cleaned1-4+b5) ... Setting up libqt6waylandcompositor6:amd64 (6.8.2-3) ... Setting up r-cran-spatstat.model (3.3-4-1) ... Setting up r-cran-bayesplot (1.11.1-1) ... Setting up r-cran-kaos (0.1.2-2) ... Setting up mosdepth (0.3.10+ds-1) ... Setting up r-cran-egg (0.4.5-3) ... Setting up r-cran-haven (2.5.4-1) ... Setting up prime-phylo (1.0.11-13+b1) ... Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... Setting up topp (2.6.0+cleaned1-4+b5) ... Setting up r-cran-usethis (3.1.0-1) ... Setting up gstreamer1.0-plugins-good:amd64 (1.26.0-1) ... Setting up qtwayland5:amd64 (5.15.15-2) ... Setting up r-cran-effects (4.2.2-1) ... Setting up r-bioc-rhdf5 (2.50.2+dfsg-1) ... Setting up r-cran-ggally (2.2.1-1) ... Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... Setting up gir1.2-tepl-6:amd64 (6.12.0-2+b1) ... Setting up r-cran-adegraphics (1.0-21-1) ... Setting up mpi-default-bin (1.18) ... Setting up relion (3.1.3-4+b1) ... Setting up r-bioc-delayedmatrixstats (1.28.1+ds-1) ... Setting up libgupnp-1.6-0:amd64 (1.6.8-1) ... Setting up r-bioc-annotationfilter (1.30.0+dfsg-2) ... Setting up r-cran-themis (1.0.3-1) ... Setting up r-cran-caret (7.0-1+dfsg-1) ... Setting up r-cran-shiny (1.10.0+dfsg-2) ... Setting up r-bioc-monocle (2.34.0-2) ... Setting up r-cran-shinyjs (2.1.0-1) ... Setting up libcootapi1.1 (1.1.14+dfsg-1) ... Setting up libxpertmass1:amd64 (1.1.0-1) ... Setting up r-cran-glmmtmb (1.1.10+dfsg-1) ... Setting up gromacs (2025.1-1) ... Setting up r-cran-tseries (0.10-58-1) ... Setting up r-cran-airr (1.5.0+dfsg-1) ... Setting up r-cran-wikidataqueryservicer (1.0.0-2) ... Setting up pbhoney (15.8.24+dfsg-8) ... Setting up r-cran-rmpi (0.7-3.3-1) ... Setting up r-cran-party (1.3-18-1) ... Setting up r-cran-pscbs (0.67.0-3) ... Setting up r-cran-webgestaltr (0.4.6-1) ... Setting up r-base (4.4.3-1) ... Setting up abyss (2.3.10-1+b1) ... Setting up r-cran-miniui (0.1.1.1-3) ... Setting up r-cran-shinyfiles (0.9.3-1) ... Setting up r-cran-broom (1.0.7+dfsg-1) ... Setting up examl (3.0.22-6+b2) ... Setting up r-cran-adegenet (2.1.11-1) ... Setting up r-cran-ncmeta (0.4.0-1) ... Setting up r-cran-mitml (0.4-5-1) ... Setting up r-cran-ggrastr (1.0.2-1) ... Setting up r-cran-rmarkdown (2.29+dfsg-1) ... Setting up libgupnp-igd-1.6-0:amd64 (1.6.0-4) ... Setting up r-cran-projpred (2.8.0+dfsg-1) ... Setting up r-cran-pkgdown (2.1.1-2) ... Setting up r-bioc-beachmat (2.22.0+ds-2) ... Setting up r-cran-goplot (1.0.2-2) ... Setting up bppphyview (0.6.1-5) ... Setting up r-cran-conquer (1.3.3-1) ... Setting up libgenomicsdb1 (1.5.4-5) ... Setting up libdatetime-format-strptime-perl (1.7900-1) ... Setting up r-cran-labelled (2.14.0-1) ... Setting up ray (2.3.1-9) ... Setting up r-cran-samr (3.0-2) ... Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... Setting up r-cran-brms (2.22.0-1) ... Setting up r-cran-r.rsp (0.46.0+ds-1) ... Setting up libqt5webenginewidgets5:amd64 (5.15.18+dfsg-2+b1) ... Setting up r-cran-adephylo (1.1-17-1) ... Setting up r-cran-redland (1.0.17-18-1) ... Setting up coot (1.1.14+dfsg-1) ... Setting up r-cran-spatstat.linnet (3.2-5-1) ... Setting up r-cran-popepi (0.4.13+dfsg-1) ... Setting up r-cran-gfonts (0.2.0-3) ... Setting up r-bioc-scaledmatrix (1.14.0+dfsg-2) ... Setting up r-cran-shinybs (0.61.1-1) ... Setting up pbsuite (15.8.24+dfsg-8) ... Setting up r-cran-rdflib (0.2.9+dfsg-1) ... Setting up r-cran-caic4 (1.0-1) ... Setting up ugene (51.0+dfsg-3) ... Setting up r-cran-forecast (8.23.0-1) ... Setting up r-cran-shinydashboard (0.7.2-1) ... Setting up libxpertmassgui1:amd64 (1.1.0-1) ... Setting up qt6-wayland:amd64 (6.8.2-3) ... Setting up r-cran-bookdown (0.42+dfsg-1) ... Setting up r-bioc-phyloseq (1.50.0+dfsg-2) ... Setting up r-cran-reprex (2.1.1-1) ... Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... Setting up phyml (3:3.3.20220408-4+b1) ... Setting up r-cran-qgam (1.3.4-1+b1) ... Setting up python3-pyqt5 (5.15.11+dfsg-2) ... Setting up r-cran-rio (1.2.3-1) ... Setting up r-cran-broom.mixed (0.2.9.6-3) ... Setting up reapr (1.0.18+dfsg-7) ... Setting up r-cran-stablelearner (0.1-5+ds-1) ... Setting up r-bioc-hdf5array (1.34.0-2) ... Setting up r-cran-spp (1.16.0-2) ... Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... Setting up r-cran-mertools (0.6.2-2) ... Setting up python3-pyqt5.qtopengl (5.15.11+dfsg-2) ... Setting up xdg-desktop-portal (1.20.0+ds-1+b1) ... Created symlink '/etc/systemd/user/graphical-session-pre.target.wants/xdg-desktop-portal-rewrite-launchers.service' → '/usr/lib/systemd/user/xdg-desktop-portal-rewrite-launchers.service'. Setting up r-other-ascat (3.2.0-1) ... Setting up r-bioc-pwalign (1.2.0-2) ... Setting up r-cran-quantreg (6.1-1) ... Setting up r-cran-geepack (1.3.12-1) ... Setting up gedit (48.1-2) ... Setting up r-cran-sn (2.1.1-2) ... Setting up genomicsdb-tools (1.5.4-5) ... Setting up relion-gui (3.1.3-4+b1) ... Setting up openms (2.6.0+cleaned1-4) ... Setting up r-cran-shinythemes (1.2.0+dfsg-1) ... Setting up r-cran-cmdfun (1.0.2-2) ... Setting up r-bioc-keggrest (1.46.0+dfsg-2) ... Setting up r-bioc-biocsingular (1.22.0+ds-2) ... Setting up r-cran-flextable (0.9.7-1) ... Setting up r-bioc-deseq2 (1.46.0+dfsg-2) ... Setting up r-bioc-annotationdbi (1.68.0-2) ... Setting up r-cran-kableextra (1.4.0+dfsg-1) ... Setting up r-bioc-go.db (3.20.0-2) ... Setting up r-cran-spatstat (3.3-1-1) ... Setting up biosyntax-gedit (1.0.0b-6) ... Setting up minexpert2 (9.6.0-1) ... Setting up r-bioc-multiassayexperiment (1.32.0+dfsg-2) ... Setting up r-cran-modelr (0.1.11-1) ... Setting up libballview1.5 (1.5.0+git20180813.37fc53c-11+b6) ... Setting up massxpert2 (8.5.0-2) ... Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... Setting up r-bioc-megadepth (1.16.0+ds-2) ... Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... Setting up pique (1.0-7) ... Setting up r-cran-profvis (0.4.0+dfsg-1) ... Setting up r-cran-mice (3.17.0-1) ... Setting up r-cran-threejs (0.3.3+dfsg-2) ... Setting up r-cran-visnetwork (2.1.2+ds-1) ... Setting up libnice10:amd64 (0.1.22-1) ... Setting up r-bioc-geoquery (2.74.0+dfsg-2) ... Setting up r-cran-tufte (0.13-1) ... Setting up r-bioc-annotate (1.84.0+dfsg-2) ... Setting up r-cran-broom.helpers (1.20.0-1) ... Setting up r-cran-tfisher (0.2.0-3) ... Setting up r-cran-rgl (1.3.17-1) ... Setting up libdatetime-format-builder-perl (0.8300-1) ... Setting up r-bioc-biomart (2.62.1+dfsg-1) ... Setting up massxpert (8.5.0-2) ... Setting up r-bioc-mofa (1.6.1+dfsg-15) ... Setting up r-cran-rhandsontable (0.3.8+dfsg-1) ... Setting up r-cran-doby (4.6.25-1) ... Setting up r-bioc-genefilter (1.88.0-2) ... Setting up r-cran-scatterd3 (1.0.1+dfsg-1) ... Setting up libdatetime-format-iso8601-perl (0.17-1) ... Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... Setting up r-bioc-genomicalignments (1.42.0-2) ... Setting up python3-pymol (3.1.0+dfsg-1) ... Setting up r-bioc-geneplotter (1.84.0+dfsg-2) ... Setting up r-cran-metap (1.12-1) ... Setting up r-cran-formattable (0.2.1+dfsg-1) ... Setting up r-bioc-rtracklayer (1.66.0-2) ... Setting up r-cran-dt (0.33+dfsg-1) ... Setting up xdg-desktop-portal-gtk (1.15.2-2) ... Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ... Setting up r-bioc-htsfilter (1.46.0+dfsg-2) ... Setting up r-cran-devtools (2.4.5-1) ... Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... Setting up r-bioc-glmgampoi (1.18.0+dfsg-2) ... Setting up biosyntax (1.0.0b-6) ... Setting up r-cran-tidyverse (2.0.0+dfsg-2) ... Setting up r-cran-alakazam (1.3.0-1) ... Setting up ballview (1.5.0+git20180813.37fc53c-11+b6) ... Setting up r-cran-tigger (1.1.0-1) ... Setting up r-cran-dygraphs (1.1.1.6+dfsg-4) ... Setting up r-cran-htmltable (2.4.3-1) ... Setting up r-cran-plotly (4.10.4+dfsg-2) ... Setting up r-bioc-dexseq (1.52.0+dfsg-2) ... Setting up r-cran-diagrammer (1.0.11+ds-2) ... Setting up r-cran-pbkrtest (0.5.3-1) ... Setting up libgstreamer-plugins-bad1.0-0:amd64 (1.26.0-1) ... Setting up pymol (3.1.0+dfsg-1) ... Setting up r-bioc-cner (1.42.0+dfsg-2) ... Setting up r-cran-misc3d (0.9-1-1) ... Setting up r-cran-car (3.1-3-1) ... Setting up gstreamer1.0-plugins-bad:amd64 (1.26.0-1) ... Setting up r-cran-mixtools (2.0.0.1-1) ... Setting up r-bioc-scuttle (1.16.0+dfsg-3) ... Setting up r-bioc-bsgenome (1.74.0-2) ... Setting up r-cran-aer (1.2-14-1) ... Setting up r-cran-heatmaply (1.5.0+dfsg-1) ... Setting up r-cran-rlumshiny (0.2.3-1) ... Setting up r-cran-factominer (2.11-1) ... Setting up r-cran-shazam (1.2.0-1) ... Setting up r-bioc-txdbmaker (1.2.1+ds-2) ... Setting up r-cran-gprofiler2 (0.2.3+dfsg-1) ... Setting up r-cran-shinystan (2.6.0-1) ... Setting up r-cran-dynlm (0.3.6-2) ... Setting up r-bioc-ensembldb (2.30.0+dfsg-3) ... Setting up libwebkit2gtk-4.1-0:amd64 (2.48.0-1+b1) ... Setting up r-cran-seurat (5.2.1-4) ... Setting up r-cran-systemfit (1.1-30-1) ... Setting up r-cran-hmisc (5.2-3-1) ... Setting up r-cran-wgcna (1.73-1) ... Setting up r-bioc-variantannotation (1.52.0-2) ... Setting up r-cran-rstatix (0.7.2-1) ... Setting up r-cran-gap (1.6+dfsg-1+b1) ... Setting up libyelp0:amd64 (42.2-2) ... Setting up r-bioc-genelendatabase (1.42.0-3) ... Setting up r-cran-rstanarm (2.32.1-2) ... Setting up r-bioc-scater (1.34.1+ds-1) ... Setting up r-bioc-goseq (1.58.0-2) ... Setting up r-cran-dharma (0.4.7-2) ... Setting up r-cran-plot3d (1.4.1-1) ... Setting up r-cran-afex (1.4-1-3) ... Setting up r-bioc-tfbstools (1.44.0+dfsg-2) ... Setting up r-bioc-mutationalpatterns (3.16.0+dfsg-2) ... Setting up r-cran-ggpubr (0.6.0-1) ... Setting up ea-utils (1.1.2+dfsg-9+b3) ... Setting up r-cran-treespace (1.1.4.3+dfsg-1) ... Setting up r-cran-rms (7.0-0-1) ... Setting up r-cran-wikidatar (2.3.3-1) ... Setting up r-bioc-biovizbase (1.54.0-2) ... Setting up r-cran-factoextra (1.0.7-2) ... Setting up yelp (42.2-2) ... Setting up r-cran-riskregression (2023.12.21+ds-1) ... Setting up r-cran-wikitaxa (0.4.0+dfsg-1) ... Setting up r-bioc-gviz (1.50.0+dfsg-2) ... Setting up r-cran-taxize (0.10.0-1) ... Setting up r-bioc-cummerbund (2.48.0-2) ... Setting up r-cran-pec (2023.04.12-1) ... Setting up r-cran-pammtools (0.5.93-1) ... Setting up r-cran-relsurv (2.3-2-1) ... Setting up libheif-plugin-dav1d:amd64 (1.19.7-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libheif-plugin-libde265:amd64 (1.19.7-1) ... Setting up liberror-prone-java (2.18.0-1) ... Setting up libruby:amd64 (1:3.3+b1) ... Setting up libwww-perl (6.78-1) ... Setting up libheif1:amd64 (1.19.7-1) ... Setting up tasksel (3.79) ... Setting up ruby-rubygems (3.6.3-1) ... Setting up python3-fonttools (4.55.3-2+b1) ... Setting up python3-azure-storage (20250304+git-1) ... Setting up libdigest-md5-file-perl (0.08-1.1) ... Setting up ruby (1:3.3+b1) ... Setting up libguava-java (32.0.1-1) ... Setting up libapache2-mod-perl2 (2.0.13-2+b2) ... apache2_invoke: Enable module perl Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of restart. Setting up libgd3:amd64 (2.3.3-12+b1) ... Setting up libapache2-reload-perl (0.14-1) ... Setting up rake (13.2.1-1) ... Setting up libgvc6 (2.42.4-3) ... Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... Setting up vim-addon-manager (0.5.11) ... Setting up node-acorn (8.8.1+ds+~cs25.17.7-2) ... Setting up libgdal36:amd64 (3.10.2+dfsg-1+b4) ... Setting up r-cran-sf (1.0-19+dfsg-1) ... Setting up libbio-db-biofetch-perl (1.7.3-4) ... Setting up perlprimer (1.2.4-2) ... Setting up r-cran-stars (0.6-8-1) ... Setting up libmagickcore-7.q16-10:amd64 (8:7.1.1.43+dfsg1-1) ... Setting up libbiojava1.9-java (1:1.9.7+dfsg-2) ... Setting up libbio-tools-run-remoteblast-perl (1.7.3-3) ... Setting up tasksel-data (3.79) ... Setting up dmsetup (2:1.02.205-1) ... Setting up python3-azure (20250304+git-1) ... /usr/lib/python3/dist-packages/azure/ai/ml/_vendor/azure_resources/aio/operations/_resources_operations.py:80: SyntaxWarning: invalid escape sequence '\ ' Valid values include ``createdTime``\ , ``changedTime`` and ``provisioningState``. For example, /usr/lib/python3/dist-packages/azure/ai/ml/_vendor/azure_resources/aio/operations/_resources_operations.py:405: SyntaxWarning: invalid escape sequence '\ ' Valid values include ``createdTime``\ , ``changedTime`` and ``provisioningState``. For example, /usr/lib/python3/dist-packages/azure/appconfiguration/_generated/models/_models.py:238: SyntaxWarning: invalid escape sequence '\ ' """An error, available when the status is ``Failed``\ , describing why the operation /usr/lib/python3/dist-packages/azure/batch/models/_models.py:9067: SyntaxWarning: invalid escape sequence '\ ' """The source port ranges to match for the rule. Valid values are '\ *' (for all ports 0 - 65535), /usr/lib/python3/dist-packages/azure/batch/models/_models.py:9235: SyntaxWarning: invalid escape sequence '\ ' using brackets (for example abc[\ *] would match a file named abc*\ ). Note that both and / are /usr/lib/python3/dist-packages/azure/communication/jobrouter/models/_models.py:2326: SyntaxWarning: invalid escape sequence '\ ' payload to scoring rule. If not set, a job's labels (sent in the payload as ``job``\ ) and a /usr/lib/python3/dist-packages/azure/communication/jobrouter/models/_models.py:2346: SyntaxWarning: invalid escape sequence '\ ' If not set, a job's labels (sent in the payload as ``job``\ ) and a job's worker selectors /usr/lib/python3/dist-packages/azure/mgmt/advisor/aio/operations/_recommendations_operations.py:190: SyntaxWarning: invalid escape sequence '\ ' properties ['ResourceId', 'ResourceGroup', 'RecommendationTypeGuid', '\ `Category /usr/lib/python3/dist-packages/azure/mgmt/advisor/operations/_recommendations_operations.py:303: SyntaxWarning: invalid escape sequence '\ ' properties ['ResourceId', 'ResourceGroup', 'RecommendationTypeGuid', '\ `Category /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:3917: SyntaxWarning: invalid escape sequence '\ ' Possible Values::code:`
`:code:`
` **Standard**\ :code:`
`:code:`
` /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:10212: SyntaxWarning: invalid escape sequence '\ ' ``aad://.onmicrosoft.com/groups/``\ ; otherwise the value is null. /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:10255: SyntaxWarning: invalid escape sequence '\ ' ``aad://.onmicrosoft.com/groups/``\ ; otherwise the value is null. /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:10284: SyntaxWarning: invalid escape sequence '\ ' ``aad://.onmicrosoft.com/groups/``\ ; otherwise the value is null. /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:10320: SyntaxWarning: invalid escape sequence '\ ' ``aad://.onmicrosoft.com/groups/``\ ; otherwise the value is null. /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:10342: SyntaxWarning: invalid escape sequence '\ ' ``aad://.onmicrosoft.com/groups/``\ ; otherwise the value is null. /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:10375: SyntaxWarning: invalid escape sequence '\ ' ``aad://.onmicrosoft.com/groups/``\ ; otherwise the value is null. /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:10396: SyntaxWarning: invalid escape sequence '\ ' ``aad://.onmicrosoft.com/groups/``\ ; otherwise the value is null. /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:10429: SyntaxWarning: invalid escape sequence '\ ' ``aad://.onmicrosoft.com/groups/``\ ; otherwise the value is null. /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:14746: SyntaxWarning: invalid escape sequence '\ ' :ivar allowed_sources: Allowed sources, e.g. ``*.trusted.com``\ , ``trusted.com``\ , /usr/lib/python3/dist-packages/azure/mgmt/apimanagement/models/_models_py3.py:14771: SyntaxWarning: invalid escape sequence '\ ' :keyword allowed_sources: Allowed sources, e.g. ``*.trusted.com``\ , ``trusted.com``\ , /usr/lib/python3/dist-packages/azure/mgmt/batchai/models/_models.py:1420: SyntaxWarning: invalid escape sequence '\ ' :param id: Required. The ID for the input directory. The job can use AZ_BATCHAI\ *INPUT*\ /usr/lib/python3/dist-packages/azure/mgmt/batchai/models/_models.py:2310: SyntaxWarning: invalid escape sequence '\ ' :param id: Required. The ID of the output directory. The job can use AZ_BATCHAI\ *OUTPUT*\ /usr/lib/python3/dist-packages/azure/mgmt/batchai/models/_models_py3.py:1547: SyntaxWarning: invalid escape sequence '\ ' :param id: Required. The ID for the input directory. The job can use AZ_BATCHAI\ *INPUT*\ /usr/lib/python3/dist-packages/azure/mgmt/batchai/models/_models_py3.py:2524: SyntaxWarning: invalid escape sequence '\ ' :param id: Required. The ID of the output directory. The job can use AZ_BATCHAI\ *OUTPUT*\ /usr/lib/python3/dist-packages/azure/mgmt/computefleet/models/_models.py:624: SyntaxWarning: invalid escape sequence '\ ' and Screenshot to diagnose VM status. **NOTE**\ : If storageUri is being /usr/lib/python3/dist-packages/azure/mgmt/computefleet/models/_models.py:3707: SyntaxWarning: invalid escape sequence '\W' characters :code:`
` Has a digit :code:`
` Has a special character (Regex match [\W_]) /usr/lib/python3/dist-packages/azure/mgmt/datamigration/models/_models_py3.py:16843: SyntaxWarning: invalid escape sequence '\S' Protocol:MachineName\SQLServerInstanceName,PortNumber. Required. /usr/lib/python3/dist-packages/azure/mgmt/datamigration/models/_models_py3.py:16916: SyntaxWarning: invalid escape sequence '\S' Protocol:MachineName\SQLServerInstanceName,PortNumber. Required. /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:63: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:130: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:224: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:312: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:398: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:543: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:612: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:675: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:738: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/documentdb/operations/database_accounts_operations.py:807: SyntaxWarning: invalid escape sequence '\w' 'resourceGroupName': self._serialize.url("resource_group_name", resource_group_name, 'str', max_length=90, min_length=1, pattern='^[-\w\._\(\)]+$'), /usr/lib/python3/dist-packages/azure/mgmt/hybridnetwork/models/_models_py3.py:6032: SyntaxWarning: invalid escape sequence '\ ' :ivar provisioning_state: The provisioning state of the site resource. **TODO**\ : Confirm if /usr/lib/python3/dist-packages/azure/mgmt/iotoperations/models/_models.py:3866: SyntaxWarning: invalid escape sequence '\ ' pattern set glob-style pattern (e.g., '\ *', 'clients/*\ '). Required.""" /usr/lib/python3/dist-packages/azure/mgmt/iotoperations/models/_models.py:3868: SyntaxWarning: invalid escape sequence '\ ' """Give access for ``Read``\ , ``Write`` and ``ReadWrite`` access level. Required. Known values /usr/lib/python3/dist-packages/azure/mgmt/machinelearningservices/models/_machine_learning_services_mgmt_client_enums.py:169: SyntaxWarning: invalid escape sequence '\ ' #: The "forest"\ it builds, is an ensemble of decision trees, usually trained with the “bagging”\ /usr/lib/python3/dist-packages/azure/mgmt/machinelearningservices/models/_machine_learning_services_mgmt_client_enums.py:1032: SyntaxWarning: invalid escape sequence '\ ' #: The "forest"\ it builds, is an ensemble of decision trees, usually trained with the “bagging”\ /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/aio/operations/_replication_protected_items_operations.py:2542: SyntaxWarning: invalid escape sequence '\R' """Execute Reverse Replication\Reprotect. /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/aio/operations/_replication_protected_items_operations.py:2583: SyntaxWarning: invalid escape sequence '\R' """Execute Reverse Replication\Reprotect. /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/aio/operations/_replication_protected_items_operations.py:2622: SyntaxWarning: invalid escape sequence '\R' """Execute Reverse Replication\Reprotect. /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:5397: SyntaxWarning: invalid escape sequence '\L' :ivar lun_id: Ordinal\LunId of the disk for the Azure VM. /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:5448: SyntaxWarning: invalid escape sequence '\L' :keyword lun_id: Ordinal\LunId of the disk for the Azure VM. /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:8836: SyntaxWarning: invalid escape sequence '\S' :ivar enable_rdp_on_target_option: The selected option to enable RDP\SSH on target vm after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:8978: SyntaxWarning: invalid escape sequence '\S' :keyword enable_rdp_on_target_option: The selected option to enable RDP\SSH on target vm after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:9510: SyntaxWarning: invalid escape sequence '\S' :ivar enable_rdp_on_target_option: The selected option to enable RDP\SSH on target vm after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:9675: SyntaxWarning: invalid escape sequence '\S' :keyword enable_rdp_on_target_option: The selected option to enable RDP\SSH on target vm after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:11412: SyntaxWarning: invalid escape sequence '\S' :ivar enable_rdp_on_target_option: The selected option to enable RDP\SSH on target VM after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:11541: SyntaxWarning: invalid escape sequence '\S' :keyword enable_rdp_on_target_option: The selected option to enable RDP\SSH on target VM after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:12193: SyntaxWarning: invalid escape sequence '\S' :ivar enable_rdp_on_target_option: The selected option to enable RDP\SSH on target vm after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:12516: SyntaxWarning: invalid escape sequence '\S' :keyword enable_rdp_on_target_option: The selected option to enable RDP\SSH on target vm after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:26323: SyntaxWarning: invalid escape sequence '\S' :ivar enable_rdp_on_target_option: The selected option to enable RDP\SSH on target vm after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/models/_models_py3.py:26382: SyntaxWarning: invalid escape sequence '\S' :keyword enable_rdp_on_target_option: The selected option to enable RDP\SSH on target vm after /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/operations/_replication_protected_items_operations.py:3476: SyntaxWarning: invalid escape sequence '\R' """Execute Reverse Replication\Reprotect. /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/operations/_replication_protected_items_operations.py:3517: SyntaxWarning: invalid escape sequence '\R' """Execute Reverse Replication\Reprotect. /usr/lib/python3/dist-packages/azure/mgmt/recoveryservicessiterecovery/operations/_replication_protected_items_operations.py:3556: SyntaxWarning: invalid escape sequence '\R' """Execute Reverse Replication\Reprotect. /usr/lib/python3/dist-packages/azure/mgmt/reservations/aio/operations/_azure_reservation_api_operations.py:163: SyntaxWarning: invalid escape sequence '\ ' """Get list of applicable ``Reservation``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/aio/operations/_reservation_operations.py:377: SyntaxWarning: invalid escape sequence '\ ' Split a ``Reservation`` into two ``Reservation``\ s with specified quantity distribution. /usr/lib/python3/dist-packages/azure/mgmt/reservations/aio/operations/_reservation_operations.py:407: SyntaxWarning: invalid escape sequence '\ ' Split a ``Reservation`` into two ``Reservation``\ s with specified quantity distribution. /usr/lib/python3/dist-packages/azure/mgmt/reservations/aio/operations/_reservation_operations.py:437: SyntaxWarning: invalid escape sequence '\ ' Split a ``Reservation`` into two ``Reservation``\ s with specified quantity distribution. /usr/lib/python3/dist-packages/azure/mgmt/reservations/aio/operations/_reservation_operations.py:583: SyntaxWarning: invalid escape sequence '\ ' """Merges two ``Reservation``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/aio/operations/_reservation_operations.py:614: SyntaxWarning: invalid escape sequence '\ ' """Merges two ``Reservation``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/aio/operations/_reservation_operations.py:645: SyntaxWarning: invalid escape sequence '\ ' """Merges two ``Reservation``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/aio/operations/_reservation_operations.py:721: SyntaxWarning: invalid escape sequence '\ ' """Get ``Reservation``\ s in a given reservation Order. /usr/lib/python3/dist-packages/azure/mgmt/reservations/aio/operations/_reservation_order_operations.py:183: SyntaxWarning: invalid escape sequence '\ ' """Get all ``ReservationOrder``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/models/_models_py3.py:3172: SyntaxWarning: invalid escape sequence '\ ' """List of ``Reservation``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/models/_models_py3.py:3288: SyntaxWarning: invalid escape sequence '\ ' """List of ``ReservationOrder``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/operations/_azure_reservation_api_operations.py:239: SyntaxWarning: invalid escape sequence '\ ' """Get list of applicable ``Reservation``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/operations/_reservation_operations.py:662: SyntaxWarning: invalid escape sequence '\ ' Split a ``Reservation`` into two ``Reservation``\ s with specified quantity distribution. /usr/lib/python3/dist-packages/azure/mgmt/reservations/operations/_reservation_operations.py:692: SyntaxWarning: invalid escape sequence '\ ' Split a ``Reservation`` into two ``Reservation``\ s with specified quantity distribution. /usr/lib/python3/dist-packages/azure/mgmt/reservations/operations/_reservation_operations.py:722: SyntaxWarning: invalid escape sequence '\ ' Split a ``Reservation`` into two ``Reservation``\ s with specified quantity distribution. /usr/lib/python3/dist-packages/azure/mgmt/reservations/operations/_reservation_operations.py:868: SyntaxWarning: invalid escape sequence '\ ' """Merges two ``Reservation``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/operations/_reservation_operations.py:899: SyntaxWarning: invalid escape sequence '\ ' """Merges two ``Reservation``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/operations/_reservation_operations.py:930: SyntaxWarning: invalid escape sequence '\ ' """Merges two ``Reservation``\ s. /usr/lib/python3/dist-packages/azure/mgmt/reservations/operations/_reservation_operations.py:1006: SyntaxWarning: invalid escape sequence '\ ' """Get ``Reservation``\ s in a given reservation Order. /usr/lib/python3/dist-packages/azure/mgmt/reservations/operations/_reservation_order_operations.py:299: SyntaxWarning: invalid escape sequence '\ ' """Get all ``ReservationOrder``\ s. /usr/lib/python3/dist-packages/azure/mgmt/resourcegraph/models/_models_py3.py:68: SyntaxWarning: invalid escape sequence '\ ' **\ ``start``\ **\ ``, end)``. Specifying a ``start`` that occurs chronologically after ``end`` /usr/lib/python3/dist-packages/azure/mgmt/resourcegraph/models/_models_py3.py:90: SyntaxWarning: invalid escape sequence '\ ' ``[``\ **\ ``start``\ **\ ``, end)``. Specifying a ``start`` that occurs chronologically after /usr/lib/python3/dist-packages/azure/mgmt/resourcegraph/models/_models_py3.py:1141: SyntaxWarning: invalid escape sequence '\ ' **\ ``start``\ **\ ``, end)``. Specifying a ``start`` that occurs chronologically after ``end`` /usr/lib/python3/dist-packages/azure/mgmt/resourcegraph/models/_models_py3.py:1163: SyntaxWarning: invalid escape sequence '\ ' ``[``\ **\ ``start``\ **\ ``, end)``. Specifying a ``start`` that occurs chronologically after /usr/lib/python3/dist-packages/azure/mgmt/signalr/models/_models_py3.py:2858: SyntaxWarning: invalid escape sequence '\ ' For example, if the urlTemplate is ``http://example.com/{hub}/api/{event}``\ , with a client /usr/lib/python3/dist-packages/azure/mgmt/signalr/models/_models_py3.py:2925: SyntaxWarning: invalid escape sequence '\ ' For example, if the urlTemplate is ``http://example.com/{hub}/api/{event}``\ , with a client /usr/lib/python3/dist-packages/azure/mgmt/streamanalytics/aio/operations/_functions_operations.py:595: SyntaxWarning: invalid escape sequence '\ ' properties to include in the response, or "\ *" to include all properties. By default, all /usr/lib/python3/dist-packages/azure/mgmt/streamanalytics/aio/operations/_inputs_operations.py:593: SyntaxWarning: invalid escape sequence '\ ' properties to include in the response, or "\ *" to include all properties. By default, all /usr/lib/python3/dist-packages/azure/mgmt/streamanalytics/aio/operations/_outputs_operations.py:593: SyntaxWarning: invalid escape sequence '\ ' properties to include in the response, or "\ *" to include all properties. By default, all /usr/lib/python3/dist-packages/azure/mgmt/streamanalytics/models/_stream_analytics_management_client_enums.py:14: SyntaxWarning: invalid escape sequence '\ ' """Authentication Mode. Valid modes are ``ConnectionString``\ , ``Msi`` and 'UserToken'.""" /usr/lib/python3/dist-packages/azure/mgmt/streamanalytics/operations/_functions_operations.py:859: SyntaxWarning: invalid escape sequence '\ ' properties to include in the response, or "\ *" to include all properties. By default, all /usr/lib/python3/dist-packages/azure/mgmt/streamanalytics/operations/_inputs_operations.py:821: SyntaxWarning: invalid escape sequence '\ ' properties to include in the response, or "\ *" to include all properties. By default, all /usr/lib/python3/dist-packages/azure/mgmt/streamanalytics/operations/_outputs_operations.py:821: SyntaxWarning: invalid escape sequence '\ ' properties to include in the response, or "\ *" to include all properties. By default, all /usr/lib/python3/dist-packages/azure/mgmt/support/aio/operations/_communications_no_subscription_operations.py:193: SyntaxWarning: invalid escape sequence '\ ' a paged result with *nextLink*\ , using which you can retrieve the next set of Communication /usr/lib/python3/dist-packages/azure/mgmt/support/aio/operations/_communications_operations.py:194: SyntaxWarning: invalid escape sequence '\ ' a paged result with *nextLink*\ , using which you can retrieve the next set of Communication /usr/lib/python3/dist-packages/azure/mgmt/support/aio/operations/_support_tickets_operations.py:177: SyntaxWarning: invalid escape sequence '\ ' tickets by *Status*\ , *CreatedDate*\ , *ServiceId*\ , and *ProblemClassificationId* using the /usr/lib/python3/dist-packages/azure/mgmt/support/aio/operations/_support_tickets_operations.py:540: SyntaxWarning: invalid escape sequence '\ ' information from your Azure resources.:code:`
`:code:`
`\ **Creating a support ticket /usr/lib/python3/dist-packages/azure/mgmt/support/aio/operations/_support_tickets_operations.py:582: SyntaxWarning: invalid escape sequence '\ ' information from your Azure resources.:code:`
`:code:`
`\ **Creating a support ticket /usr/lib/python3/dist-packages/azure/mgmt/support/aio/operations/_support_tickets_operations.py:622: SyntaxWarning: invalid escape sequence '\ ' information from your Azure resources.:code:`
`:code:`
`\ **Creating a support ticket /usr/lib/python3/dist-packages/azure/mgmt/support/operations/_communications_no_subscription_operations.py:308: SyntaxWarning: invalid escape sequence '\ ' a paged result with *nextLink*\ , using which you can retrieve the next set of Communication /usr/lib/python3/dist-packages/azure/mgmt/support/operations/_communications_operations.py:326: SyntaxWarning: invalid escape sequence '\ ' a paged result with *nextLink*\ , using which you can retrieve the next set of Communication /usr/lib/python3/dist-packages/azure/mgmt/support/operations/_support_tickets_operations.py:319: SyntaxWarning: invalid escape sequence '\ ' tickets by *Status*\ , *CreatedDate*\ , *ServiceId*\ , and *ProblemClassificationId* using the /usr/lib/python3/dist-packages/azure/mgmt/support/operations/_support_tickets_operations.py:681: SyntaxWarning: invalid escape sequence '\ ' information from your Azure resources.:code:`
`:code:`
`\ **Creating a support ticket /usr/lib/python3/dist-packages/azure/mgmt/support/operations/_support_tickets_operations.py:723: SyntaxWarning: invalid escape sequence '\ ' information from your Azure resources.:code:`
`:code:`
`\ **Creating a support ticket /usr/lib/python3/dist-packages/azure/mgmt/support/operations/_support_tickets_operations.py:763: SyntaxWarning: invalid escape sequence '\ ' information from your Azure resources.:code:`
`:code:`
`\ **Creating a support ticket /usr/lib/python3/dist-packages/azure/mgmt/synapse/models/_models_py3.py:6232: SyntaxWarning: invalid escape sequence '\ ' :ivar maintenance_window_cycles: Available maintenance cycles e.g. {Saturday, 0, 48\ *60}, /usr/lib/python3/dist-packages/azure/mgmt/synapse/models/_models_py3.py:6288: SyntaxWarning: invalid escape sequence '\ ' :keyword maintenance_window_cycles: Available maintenance cycles e.g. {Saturday, 0, 48\ *60}, /usr/lib/python3/dist-packages/azure/mgmt/workloads/models/_models_py3.py:2909: SyntaxWarning: invalid escape sequence '\W' digit :code:`
` Has a special character (Regex match [\W_]) :code:`
`:code:`
` /usr/lib/python3/dist-packages/azure/mgmt/workloads/models/_models_py3.py:2954: SyntaxWarning: invalid escape sequence '\W' digit :code:`
` Has a special character (Regex match [\W_]) :code:`
`:code:`
` /usr/lib/python3/dist-packages/azure/mgmt/workloadssapvirtualinstance/models/_models_py3.py:1980: SyntaxWarning: invalid escape sequence '\W' digit :code:`
` Has a special character (Regex match [\W_]) :code:`
`:code:`
` /usr/lib/python3/dist-packages/azure/mgmt/workloadssapvirtualinstance/models/_models_py3.py:2025: SyntaxWarning: invalid escape sequence '\W' digit :code:`
` Has a special character (Regex match [\W_]) :code:`
`:code:`
` /usr/lib/python3/dist-packages/azure/purview/catalog/aio/operations/_operations.py:2732: SyntaxWarning: invalid escape sequence '\:' attr:\:code:``=:code:``. /usr/lib/python3/dist-packages/azure/purview/catalog/aio/operations/_operations.py:3537: SyntaxWarning: invalid escape sequence '\:' attr:\:code:``=\:code:``. /usr/lib/python3/dist-packages/azure/purview/catalog/aio/operations/_operations.py:4216: SyntaxWarning: invalid escape sequence '\:' typeName=\:code:``&attr_1:\:code:``=\:code:``&attr_2:\:code:``=\:code:``&attr_3:\:code:``=\:code:`` /usr/lib/python3/dist-packages/azure/purview/catalog/operations/_operations.py:6219: SyntaxWarning: invalid escape sequence '\:' attr:\:code:``=:code:``. /usr/lib/python3/dist-packages/azure/purview/catalog/operations/_operations.py:7024: SyntaxWarning: invalid escape sequence '\:' attr:\:code:``=\:code:``. /usr/lib/python3/dist-packages/azure/purview/catalog/operations/_operations.py:7703: SyntaxWarning: invalid escape sequence '\:' typeName=\:code:``&attr_1:\:code:``=\:code:``&attr_2:\:code:``=\:code:``&attr_3:\:code:``=\:code:`` /usr/lib/python3/dist-packages/azure/servicemanagement/schedulermanagementservice.py:59: SyntaxWarning: invalid escape sequence '\m' CURRENT_USER\my\CertificateName format. /usr/lib/python3/dist-packages/azure/servicemanagement/servicebusmanagementservice.py:59: SyntaxWarning: invalid escape sequence '\m' CURRENT_USER\my\CertificateName format. /usr/lib/python3/dist-packages/azure/servicemanagement/servicemanagementservice.py:81: SyntaxWarning: invalid escape sequence '\m' CURRENT_USER\my\CertificateName format. /usr/lib/python3/dist-packages/azure/servicemanagement/sqldatabasemanagementservice.py:55: SyntaxWarning: invalid escape sequence '\m' CURRENT_USER\my\CertificateName format. /usr/lib/python3/dist-packages/azure/servicemanagement/websitemanagementservice.py:55: SyntaxWarning: invalid escape sequence '\m' CURRENT_USER\my\CertificateName format. /usr/lib/python3/dist-packages/azure/synapse/artifacts/models/_models.py:110: SyntaxWarning: invalid escape sequence '\d' ((\d+).)?(\d\d):(60|([0-5][0-9])):(60|([0-5][0-9])). /usr/lib/python3/dist-packages/azure/synapse/artifacts/models/_models.py:1328: SyntaxWarning: invalid escape sequence '\d' string), pattern: ((\d+).)?(\d\d):(60|([0-5][0-9])):(60|([0-5][0-9]))..). /usr/lib/python3/dist-packages/azure/synapse/artifacts/models/_models.py:4218: SyntaxWarning: invalid escape sequence '\d' string), pattern: ((\d+).)?(\d\d):(60|([0-5][0-9])):(60|([0-5][0-9])). /usr/lib/python3/dist-packages/azure/synapse/artifacts/models/_models.py:4280: SyntaxWarning: invalid escape sequence '\d' string), pattern: ((\d+).)?(\d\d):(60|([0-5][0-9])):(60|([0-5][0-9])). /usr/lib/python3/dist-packages/azure/synapse/artifacts/models/_models.py:18198: SyntaxWarning: invalid escape sequence '\d' ((\d+).)?(\d\d):(60|([0-5][0-9])):(60|([0-5][0-9])). /usr/lib/python3/dist-packages/azure/synapse/artifacts/models/_models.py:19096: SyntaxWarning: invalid escape sequence '\d' ((\d+).)?(\d\d):(60|([0-5][0-9])):(60|([0-5][0-9])). Type: string (or Expression with /usr/lib/python3/dist-packages/azure/synapse/artifacts/models/_models.py:19185: SyntaxWarning: invalid escape sequence '\d' ((\d+).)?(\d\d):(60|([0-5][0-9])):(60|([0-5][0-9])). /usr/lib/python3/dist-packages/azure/synapse/artifacts/models/_models.py:19749: SyntaxWarning: invalid escape sequence '\d' ((\d+).)?(\d\d):(60|([0-5][0-9])):(60|([0-5][0-9])). Setting up emboss-lib (6.6.0+dfsg-15) ... Setting up r-cran-spdep (1.3-5+dfsg-1) ... Setting up embassy-domsearch (1:0.1.660-4) ... Setting up python3-gdal (3.10.2+dfsg-1+b4) ... Setting up libprotobuf-java (3.21.12-10) ... Setting up libplexus-container-default-java (2.1.1-1) ... Setting up med-tasks (3.8.2) ... Setting up r-cran-spatialreg (1.3-6+dfsg-1) ... Setting up graphviz (2.42.4-3) ... Setting up r-cran-sftime (0.2-0-6) ... Setting up libg20 (0.72-13) ... Setting up libxml-parser-perl (2.47-1+b3) ... Setting up rnahybrid (2.1.2-8) ... Setting up node-corepack (0.24.0-4) ... Setting up libnode115:amd64 (20.19.0+dfsg-1) ... Setting up python3-matplotlib (3.8.3-7+b1) ... Setting up libbiojava-java (1:1.9.7+dfsg-2) ... Setting up embassy-domalign (0.1.660-5) ... Setting up lefse (1.1.2-2) ... Setting up libvm-ec2-perl (1.28-5) ... Setting up libmagickwand-7.q16-10:amd64 (8:7.1.1.43+dfsg1-1) ... Setting up emboss (6.6.0+dfsg-15) ... Setting up r-cran-epir (2.0.80+dfsg-1) ... Setting up r-cran-qtl (1.70-1) ... Setting up libruby3.3:amd64 (3.3.7-1) ... Setting up libheif-plugin-x265:amd64 (1.19.7-1) ... Setting up libheif-plugin-aomenc:amd64 (1.19.7-1) ... Setting up python3-bioframe (0.4.1-2) ... Setting up python3-pydot (2.0.0-3) ... Setting up svim (2.0.0-3) ... Setting up libgraph-readwrite-perl (2.10-1) ... Setting up dvipng (1.18-1) ... Setting up toppred (1.10-10) ... Setting up libxml-twig-perl (1:3.52-3) ... Setting up libnet-dbus-perl (1.2.0-2+b3) ... Setting up python3-seaborn (0.13.2-5) ... Setting up python3-sqt (0.8.0-9) ... Setting up bio-vcf (0.9.5-3) ... Setting up poretools (0.6.0+dfsg-7) ... Setting up arden (1.0-6) ... Setting up cwltool (3.1.20250110105449-3) ... Setting up gnuplot-qt (6.0.2+dfsg1-1) ... update-alternatives: using /usr/bin/gnuplot-qt to provide /usr/bin/gnuplot (gnuplot) in auto mode Setting up r-cran-areal (0.1.8+dfsg-2) ... Setting up nodejs (20.19.0+dfsg-1) ... update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode Setting up python3-upsetplot (0.9.0-3) ... Setting up libguice-java (5.1.0-1) ... Setting up libxml-xpath-perl (1.48-1) ... Setting up libbio-variation-perl (1.7.5-3) ... Setting up libapache-dbi-perl (1.12-3) ... Setting up libjung-free-java (2.1.1-3) ... Setting up r-cran-gstat (2.1-3-1) ... Setting up gnustep-base-runtime (1.31.1-2) ... Setting up libgd-perl (2.78-1+b3) ... Setting up r-cran-lwgeom (0.2-14-1) ... Setting up r-cran-transformr (0.1.5-1) ... Setting up pyscanfcs (0.3.6+ds-5) ... Setting up toil (8.0.0-3) ... Setting up embassy-domainatrix (0.1.660-5) ... Setting up libmagick++-7.q16-5:amd64 (8:7.1.1.43+dfsg1-1) ... Setting up r-cran-terra (1.8-29-1) ... Setting up q2-demux (2024.5.0+dfsg-1) ... Setting up r-cran-v8 (6.0.2+dfsg-1) ... Setting up libxml-sax-expat-perl (0.51-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::Expat with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libdevmapper1.02.1:amd64 (2:1.02.205-1) ... Setting up librpc-xml-perl (0.82-1) ... Setting up python3-colormap (1.3.0-1) ... Setting up python3-pygraphviz (1.14-1+b2) ... Setting up roary (3.13.0+dfsg-2) ... Setting up pirs (2.0.2+dfsg-12) ... Setting up libxml-perl (0.08-4) ... Setting up libcryptsetup12:amd64 (2:2.7.5-1) ... Setting up libgd-svg-perl (0.33-3) ... Setting up ruby3.3 (3.3.7-1) ... Setting up libbio-db-gff-perl (1.7.4-1) ... Setting up gnuplot (6.0.2+dfsg1-1) ... Setting up abpoa (1.5.3-1+b3) ... Setting up pycorrfit (1.1.7+nopack-3) ... Setting up psortb (3.0.6+dfsg-4+b2) ... Setting up libbio-db-seqfeature-perl (1.7.5-1) ... Setting up adun-core (0.81-15+b1) ... Setting up python3-matplotlib-venn (1.1.1-1) ... Setting up mauve-aligner (2.4.0+4736-6) ... Setting up libbio-graphics-perl (2.40-6) ... Setting up q2-feature-table (2024.5.0+dfsg-1) ... Setting up ruby-sdbm:amd64 (1.0.0-5+b7) ... Setting up python3-ruffus (2.8.4-7) ... /usr/lib/python3/dist-packages/ruffus/test/draw_specified_dependency_tree.py:112: SyntaxWarning: invalid escape sequence '\[' attributes = re.compile("\[.+\]") Setting up libsoap-lite-perl (1.27-3) ... Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ... Setting up multiqc (1.21+dfsg-2) ... Setting up python3-csb (1.2.5+dfsg-10) ... /usr/lib/python3/dist-packages/csb/bio/io/hhpred.py:210: SyntaxWarning: invalid escape sequence '\d' m = re.search('(\d+)\D+(\d+)', line).groups() /usr/lib/python3/dist-packages/csb/bio/io/hhpred.py:260: SyntaxWarning: invalid escape sequence '\s' seq = re.sub('\s+', '', ''.join(lines[1:])) /usr/lib/python3/dist-packages/csb/bio/io/hhpred.py:307: SyntaxWarning: invalid escape sequence '\-' pattern = re.compile('^[A-Z\-]\s[0-9]+\s+') /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:31: SyntaxWarning: invalid escape sequence '\s' input_file_name = re.compile('>>>-----.*?\n.*?\n\s*\|\s*(\S+)\s+') /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:32: SyntaxWarning: invalid escape sequence '\d' residues = re.compile('(\d+)\s*residues\s\|') /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:33: SyntaxWarning: invalid escape sequence '\s' ramachandran_plot = re.compile('Ramachandran\splot:\s*(\d+\.\d+)' + /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:34: SyntaxWarning: invalid escape sequence '\s' '%\s*core\s*(\d+\.\d+)%\s*allow\s*(\d+\.\d+)' + /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:35: SyntaxWarning: invalid escape sequence '\s' '%\s*gener\s*(\d+\.\d+)%\s*disall') /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:36: SyntaxWarning: invalid escape sequence '\s' labelled_all = re.compile('Ramachandrans:\s*(\d+)\s*.*?out\sof\s*(\d+)') /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:37: SyntaxWarning: invalid escape sequence '\s' labelled_chi = re.compile('Chi1-chi2\splots:\s*(\d+)\s*.*?out\sof\s*(\d+)') /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:38: SyntaxWarning: invalid escape sequence '\s' bad_contacts = re.compile('Bad\scontacts:\s*(\d+)') /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:39: SyntaxWarning: invalid escape sequence '\s' g_factors = re.compile('G-factors\s*Dihedrals:\s*([0-9-+.]+)' + /usr/lib/python3/dist-packages/csb/bio/io/procheck.py:40: SyntaxWarning: invalid escape sequence '\s' '\s*Covalent:\s*([0-9-+.]+)\s*Overall:\s*([0-9-+.]+)') /usr/lib/python3/dist-packages/csb/bio/io/whatif.py:32: SyntaxWarning: invalid escape sequence '\s' re_ramachandran = re.compile('Ramachandran\s*Z-score\s*:\s*([0-9.Ee-]+)') /usr/lib/python3/dist-packages/csb/bio/io/whatif.py:33: SyntaxWarning: invalid escape sequence '\s' re_1st = re.compile('1st\s*generation\s*packing\s*quality\s*:\s*([0-9.Ee-]+)') /usr/lib/python3/dist-packages/csb/bio/io/whatif.py:34: SyntaxWarning: invalid escape sequence '\s' re_2nd = re.compile('2nd\s*generation\s*packing\s*quality\s*:\s*([0-9.Ee-]+)') /usr/lib/python3/dist-packages/csb/bio/io/whatif.py:35: SyntaxWarning: invalid escape sequence '\s' re_backbone = re.compile('Backbone\s*conformation\s*Z-score\s*:\s*([0-9.Ee-]+)') /usr/lib/python3/dist-packages/csb/bio/io/whatif.py:36: SyntaxWarning: invalid escape sequence '\S' re_rotamer = re.compile('chi-1\S*chi-2\s*rotamer\s*normality\s*:\s*([0-9.Ee-]+)') /usr/lib/python3/dist-packages/csb/bio/io/wwpdb.py:1222: SyntaxWarning: invalid escape sequence '\d' res = re.search("(\d+(?:\.\d+)?)\s+ANGSTROM", line) /usr/lib/python3/dist-packages/csb/bio/sequence/__init__.py:566: SyntaxWarning: invalid escape sequence '\w' self._residues += re.sub('([^\w\-\.])+', '', string) /usr/lib/python3/dist-packages/csb/bio/structure/__init__.py:2129: SyntaxWarning: invalid escape sequence '\s' string = ''.join(re.split('\s+', string)) /usr/lib/python3/dist-packages/csb/bio/structure/__init__.py:2131: SyntaxWarning: invalid escape sequence '\s' conf_string = ''.join(re.split('\s+', conf_string)) /usr/lib/python3/dist-packages/csb/statistics/__init__.py:343: SyntaxWarning: invalid escape sequence '\s' argmin {\sum w_i |x_i - \mu|} /usr/lib/python3/dist-packages/csb/test/cases/io/__init__.py:482: SyntaxWarning: invalid escape sequence '\w' "([0-9a-zA-Z]([-.\w]*[0-9a-zA-Z])"] Setting up libmagickcore-7.q16-10-extra:amd64 (8:7.1.1.43+dfsg1-1) ... Setting up libgraphviz-perl (2.24-1) ... Setting up tnseq-transit (3.3.12-1) ... Setting up imagemagick-7.q16 (8:7.1.1.43+dfsg1-1) ... update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare-im7 (compare-im7) in auto mode update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate-im7 (animate-im7) in auto mode update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert-im7 (convert-im7) in auto mode update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite-im7 (composite-im7) in auto mode update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure-im7 (conjure-im7) in auto mode update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import-im7 (import-im7) in auto mode update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify-im7 (identify-im7) in auto mode update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream-im7 (stream-im7) in auto mode update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display-im7 (display-im7) in auto mode update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage-im7 (montage-im7) in auto mode update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify-im7 (mogrify-im7) in auto mode update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick (magick) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick) doesn't exist update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick-im7 (magick-im7) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick-im7.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick-im7) doesn't exist update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script (magick-script) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script) doesn't exist update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script-im7 (magick-script-im7) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script-im7.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script-im7) doesn't exist Setting up mipe (1.1-9) ... Setting up sga (0.10.15-7+b1) ... Setting up python3-pairtools (1.1.3-1+b1) ... Setting up circos (0.69.9+dfsg-2) ... Setting up libmaven3-core-java (3.9.9-1) ... Setting up libbio-cluster-perl (1.7.3-6) ... Setting up libmaven-shared-incremental-java (1.1-6) ... Setting up circos-tools (0.23-1) ... Setting up libmaven-shared-io-java (3.0.0-4) ... Setting up libxml-dom-perl (1.46-2) ... Setting up q2-quality-control (2024.5.0-1) ... Setting up libbio-asn1-entrezgene-perl (1.730-3) ... Setting up r-cran-magick (2.8.5+dfsg-1+b1) ... Setting up libgo-perl (0.15-10) ... Setting up gbrowse (2.56+dfsg-12) ... apache2_invoke: Enable configuration gbrowse Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of reload. Setting up atac (0~20150903+r2013-9+b1) ... Setting up r-cran-gganimate (1.0.9-1) ... Setting up libxml-dom-xpath-perl (0.14-4) ... Setting up libxml-checker-perl (0.13-7) ... Setting up r-cran-jsonld (2.2.1+dfsg-1) ... Setting up csb (1.2.5+dfsg-10) ... Setting up libbio-eutilities-perl (1.77-3) ... Setting up r-cran-raster (3.6-31-1) ... Setting up systemd-cryptsetup (257.4-3) ... Setting up libplexus-compiler-java (2.13.0-1) ... Setting up libmaven-compiler-plugin-java (3.13.0-1) ... Setting up beads (1.1.22-1+b3) ... Setting up libjni-inchi-java (0.8+dfsg-8) ... Setting up r-cran-exactextractr (0.10.0-1+b1) ... Setting up murasaki-common (1.68.6-14) ... Setting up imagemagick (8:7.1.1.43+dfsg1-1) ... Setting up libmaven-file-management-java (3.0.0-2) ... Setting up libxmlrpc-lite-perl (0.717-5) ... Setting up microbegps (1.0.0-7) ... Setting up kmer (0~20150903+r2013-9) ... Setting up raster3d (3.0-7-2+b2) ... Setting up runcircos-gui (0.0+git20200528.82dda8c-1+b1) ... Setting up surpyvor (0.5-2) ... Setting up libjmol-java (16.2.33+dfsg-1) ... Setting up murasaki (1.68.6-14+b1) ... Setting up libbio-featureio-perl (1.6.905-2) ... Setting up q2-feature-classifier (2024.2.0-1) ... Setting up libmaven-jar-plugin-java (3.3.0-2) ... Setting up libmsgpack-java (0.9.6-1) ... Setting up libmmtf-java (1.0.11-1) ... Processing triggers for systemd (257.4-3) ... Processing triggers for debianutils (5.21) ... Processing triggers for base-files (13.7) ... Processing triggers for libc-bin (2.41-6) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureSign_Root_CA12.pem Adding debian:SecureSign_Root_CA14.pem Adding debian:SecureSign_Root_CA15.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_CYBER_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up antlr (2.7.7+dfsg-14) ... Setting up openjdk-21-jre:amd64 (21.0.7~7ea-1) ... Setting up ivy (2.5.3-1) ... Setting up javahelp2 (2.0.05.ds1-10) ... Setting up ant (1.10.15-1) ... Setting up libmsv-java (2009.1+dfsg1-6) ... Setting up junit4 (4.13.2-5) ... Setting up melting (5.2.0-2) ... Setting up groovy (2.4.21-10) ... update-alternatives: using /usr/share/groovy/bin/groovy to provide /usr/bin/groovy (groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyc to provide /usr/bin/groovyc (groovyc) in auto mode update-alternatives: using /usr/share/groovy/bin/grape to provide /usr/bin/grape (grape) in auto mode update-alternatives: using /usr/share/groovy/bin/startGroovy to provide /usr/bin/startGroovy (startGroovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovysh to provide /usr/bin/groovysh (groovysh) in auto mode update-alternatives: using /usr/share/groovy/bin/java2groovy to provide /usr/bin/java2groovy (java2groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyConsole to provide /usr/bin/groovyConsole (groovyConsole) in auto mode update-alternatives: using /usr/share/groovy/bin/groovydoc to provide /usr/bin/groovydoc (groovydoc) in auto mode Setting up openjdk-21-jdk-headless:amd64 (21.0.7~7ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up iva (1.0.11+ds-6) ... Setting up bbmap (39.18+dfsg-1) ... Setting up antlr4 (4.9.2-3) ... Setting up jaligner (1.0+dfsg-11) ... Setting up default-jre (2:1.21-76) ... Setting up mhap (2.1.3+dfsg-3) ... Setting up chromimpute (1.0.3+dfsg-5) ... Setting up ant-optional (1.10.15-1) ... Setting up libwoodstox-java (1:6.2.1-1) ... Setting up openjdk-21-jdk:amd64 (21.0.7~7ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up default-jdk-headless (2:1.21-76) ... Setting up libjsap-java (2.1-5) ... Setting up metastudent (2.0.1-10) ... Setting up canu (2.2+dfsg-5) ... Setting up r-cran-rjava (1.0-11-1) ... Setting up beast-mcmc (1.10.4+dfsg-6) ... Setting up bioperl-run (1.7.3-13) ... Setting up beast2-mcmc (2.7.6+dfsg-1) ... Setting up circlator (1.5.6-13) ... Setting up nanook (1.33+dfsg-6) ... Setting up megan-ce (6.21.1+dfsg-4) ... Setting up libdsiutils-java (2.7.3+dfsg-1) ... Setting up malt (0.5.2-3) ... Setting up proalign (0.603-6) ... Setting up thesias (3.1.1-3) ... Setting up libgpars-groovy-java (1.2.1-11) ... Setting up junit5 (5.10.3-1) ... Setting up libbytecode-java (0.92.svn.20090106-3) ... Setting up libjson-java (3.1.0+dfsg-2) ... Setting up libhtsjdk-java (4.1.3+dfsg-2) ... Setting up alter-sequence-alignment (1.3.4-8) ... Setting up trimmomatic (0.39+dfsg-2) ... Setting up sepp (4.5.5+dfsg-1) ... Setting up surankco (0.0.r5+dfsg-4) ... Setting up artfastqgenerator (0.0.20150519-5) ... Setting up prokka (1.14.6+dfsg-6) ... Setting up jmol (16.2.33+dfsg-1) ... Setting up chromhmm (1.26+dfsg-3) ... Setting up libistack-commons-java (3.0.6-5) ... Setting up libgkl-java (0.8.11+dfsg-2) ... Setting up fastqc (0.12.1+dfsg-4) ... Setting up varna (3-93+ds-7) ... Setting up treeview (1.2.0+dfsg-2) ... Setting up alien-hunter (1.7-10) ... Setting up jemboss (6.6.0+dfsg-15) ... Setting up spread-phy (1.0.7+dfsg-5) ... Setting up neobio (0.0.20030929-6) ... Setting up cgview (0.0.20100111-7) ... Setting up brig (0.95+dfsg-3) ... Setting up default-jdk (2:1.21-76) ... Setting up beagle (241217-3) ... Setting up cct (1:1.0.3-1) ... Setting up libpicard-java (3.3.0+dfsg-2) ... Setting up libicb-utils-java (2.0.1+git20161002.afee1d9-5) ... Setting up jmodeltest (2.1.10+dfsg-12) ... Setting up pilon (1.24-4) ... Setting up libcodemodel-java (2.6+jaxb2.3.0.1-11) ... Setting up prottest (3.4.2+dfsg-8) ... Setting up artemis (18.2.0+dfsg-4) ... Setting up tipp (1.0+dfsg-3) ... Setting up unicycler (0.5.1+dfsg-3) ... Setting up shovill (1.1.0-9) ... Setting up libtxw2-java (2.3.0.1-11) ... Setting up trinityrnaseq (2.15.2+dfsg-1) ... Setting up plasmidid (1.6.5+dfsg-2) ... Setting up igv (2.18.5+dfsg-1) ... Setting up libjaxb-java (2.3.0.1-11) ... Setting up libmetro-policy-java (2.7.2-4) ... Setting up libbiojava6-java (6.1.0+dfsg-5) ... Setting up figtree (1.4.4-6) ... Setting up picard-tools (3.3.0+dfsg-2) ... Setting up libjaba-client-java (2.2.0-2) ... Setting up rockhopper (2.0.3+dfsg2-5) ... Setting up libsnpeff-java (5.2.f+dfsg-1) ... Setting up rdp-readseq (2.0.2-9) ... Setting up paleomix (1.3.8-2) ... Setting up libsnpsift-java (5.2.e+dfsg-2) ... Setting up libjaxws-java (2.3.0.2-2) ... Setting up drop-seq-tools (3.0.2+dfsg-1) ... Setting up snpeff (5.2.f+dfsg-1) ... Setting up snpsift (5.2.e+dfsg-2) ... Setting up rdp-classifier (2.10.2-7) ... Setting up snippy (4.6.0+dfsg-5) ... Setting up jalview (2.11.4.1+dfsg-1) ... Setting up rdp-alignment (1.2.0-8) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Setting up sgml-data (2.0.11+nmu1) ... Setting up polkitd (126-2) ... Creating group 'polkitd' with GID 991. Creating user 'polkitd' (User for polkitd) with UID 991 and GID 991. Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of reload. Setting up w3c-sgml-lib (1.3-3) ... Setting up modemmanager (1.23.95-2) ... Created symlink '/etc/systemd/system/dbus-org.freedesktop.ModemManager1.service' → '/usr/lib/systemd/system/ModemManager.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/ModemManager.service' → '/usr/lib/systemd/system/ModemManager.service'. Setting up python3-biopython (1.85+dfsg-2+b1) ... Setting up kaptive (2.0.8-1) ... Setting up parsnp (2.1.3+dfsg-1) ... Setting up ariba (2.14.7+ds-7) ... Setting up metaphlan (4.0.4-1) ... /usr/lib/python3/dist-packages/metaphlan/__init__.py:150: SyntaxWarning: invalid escape sequence '\D' sys.stderr.write('\n\Downloading and uncompressing indexes\n') Setting up python3-nanoget (1.19.3-1) ... Setting up recan (0.5+dfsg-1) ... Setting up python3-cgecore (1.5.6+ds-2) ... Setting up python3-gffutils (0.13-2) ... Setting up srst2 (0.2.0-13) ... Setting up seqsero (1.0.1+dfsg-6) ... Setting up python3-presto (0.7.2-2) ... Setting up python3-treetime (0.11.4-1) ... Setting up virulencefinder (2.0.5-2) ... Setting up seqmagick (0.8.6-3) ... Setting up kleborate (2.4.1-4) ... Setting up gasic (0.0.r19-8) ... Setting up gubbins (3.4-2) ... Setting up busco (5.5.0-3) ... /usr/lib/python3/dist-packages/busco/BuscoPlacer.py:211: SyntaxWarning: invalid escape sequence '\[' "[^0-9][0-9]*:[0-9]*[^0-9]{0,1}[0-9]*[^0-9]{0,2}[0-9]*\[%s\]" Setting up cnvkit (0.9.12-1) ... Setting up optimir (1.2-2) ... Setting up nanofilt (2.8.0-1) ... Setting up cutesv (2.1.1-1) ... Setting up mcaller (1.0.3+git20210624.b415090-3) ... Setting up python3-nanostat (1.4.0-3) ... Setting up changeo (1.3.0-3) ... Setting up nanolyse (1.2.0-4) ... Setting up python3-pbcore (2.1.2+dfsg-11) ... Setting up python3-bcbio-gff (0.7.1-2) ... Setting up graphlan (1.1.3-6) ... Setting up readucks (0.0.3-6) ... Setting up yanagiba (1.0.0-5) ... Setting up insilicoseq (2.0.1-1) ... Setting up python3-mirtop (0.4.28-3) ... Setting up presto (0.7.2-2) ... Setting up augur (24.4.0-1) ... Setting up qcat (1.1.0-7) ... Setting up resfinder (4.4.2-2) ... Setting up python3-kineticstools (0.6.1+git20220223.1326a4d+dfsg-6) ... Setting up hinge (0.5.0-7+b3) ... Setting up nanostat (1.4.0-3) ... Setting up mirtop (0.4.28-3) ... Setting up kineticstools (0.6.1+git20220223.1326a4d+dfsg-6) ... Processing triggers for sgml-base (1.31) ... Setting up docbook-xml (4.5-13) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up snakemake (7.32.4-7) ... Setting up python3-pdb2pqr (3.6.1+dfsg-1) ... Setting up python3-sphinx (8.1.3-5) ... Setting up qcumber (2.3.0-2) ... ************************************************************************* * Minikraken DB is missing. Either move the according files to * * /var/lib/kraken/minikraken_20141208 * or call the script /usr/share/doc/qcumber/get-minikrakendb as root. * ************************************************************************* Setting up pdb2pqr (3.6.1+dfsg-1) ... Setting up python3-numpydoc (1.8.0-1) ... Setting up python3-deeptools (3.5.6+dfsg-1) ... Setting up pigx-rnaseq (0.1.1-1) ... Processing triggers for menu (2.1.51) ... Setting up blends-common (0.7.10) ... Setting up med-config (3.8.2) ... Setting up med-bio (3.8.2) ... Processing triggers for dictionaries-common (1.30.10) ... aspell-autobuildhash: processing: en [en-common]. aspell-autobuildhash: processing: en [en-variant_0]. aspell-autobuildhash: processing: en [en-variant_1]. aspell-autobuildhash: processing: en [en-variant_2]. aspell-autobuildhash: processing: en [en-w_accents-only]. aspell-autobuildhash: processing: en [en-wo_accents-only]. aspell-autobuildhash: processing: en [en_AU-variant_0]. aspell-autobuildhash: processing: en [en_AU-variant_1]. aspell-autobuildhash: processing: en [en_AU-w_accents-only]. aspell-autobuildhash: processing: en [en_AU-wo_accents-only]. aspell-autobuildhash: processing: en [en_CA-variant_0]. aspell-autobuildhash: processing: en [en_CA-variant_1]. aspell-autobuildhash: processing: en [en_CA-w_accents-only]. aspell-autobuildhash: processing: en [en_CA-wo_accents-only]. aspell-autobuildhash: processing: en [en_GB-ise-w_accents-only]. aspell-autobuildhash: processing: en [en_GB-ise-wo_accents-only]. aspell-autobuildhash: processing: en [en_GB-ize-w_accents-only]. aspell-autobuildhash: processing: en [en_GB-ize-wo_accents-only]. aspell-autobuildhash: processing: en [en_GB-variant_0]. aspell-autobuildhash: processing: en [en_GB-variant_1]. aspell-autobuildhash: processing: en [en_US-w_accents-only]. aspell-autobuildhash: processing: en [en_US-wo_accents-only]. Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for tex-common (6.19) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Processing triggers for libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-2) ... Processing triggers for libc-bin (2.41-6) ... Processing triggers for sgml-base (1.31) ... Processing triggers for ca-certificates-java (20240118) ... done. 22m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'apt-get', '-y', 'install', 'med-bio=3.8.2'] 22m18.0s INFO: Running scripts post_install 22m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_install_exceptions'] 22m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_install_exceptions'] 22m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_install_extras_unbreak_symlinks'] 22m20.4s DUMP: Creating empty target /usr/share/color/icc/sRGB_IEC61966-2-1_black_scaled.icc 22m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'tmp/scripts/post_install_extras_unbreak_symlinks'] 22m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'systemd-tmpfiles', '--cat-config'] 22m20.4s DUMP: # /usr/lib/tmpfiles.d/20-systemd-shell-extra.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. L$ /etc/profile.d/70-systemd-shell-extra.sh - - - - /usr/lib/systemd/profile.d/70-systemd-shell-extra.sh # /usr/lib/tmpfiles.d/20-systemd-ssh-generator.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. L$ /etc/ssh/ssh_config.d/20-systemd-ssh-proxy.conf - - - - /usr/lib/systemd/ssh_config.d/20-systemd-ssh-proxy.conf d /run/sshd 0755 # /usr/lib/tmpfiles.d/20-systemd-stub.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Copy systemd-stub provided metadata such as PCR signature and public key file # from initrd into /run/, so that it will survive the initrd stage C /run/systemd/stub/profile 0444 root root - /.extra/profile C /run/systemd/stub/os-release 0444 root root - /.extra/os-release C /run/systemd/tpm2-pcr-signature.json 0444 root root - /.extra/tpm2-pcr-signature.json C /run/systemd/tpm2-pcr-public-key.pem 0444 root root - /.extra/tpm2-pcr-public-key.pem # /usr/lib/tmpfiles.d/credstore.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. d /etc/credstore 0700 root root d /etc/credstore.encrypted 0700 root root z /run/credstore 0700 root root z /run/credstore.encrypted 0700 root root # /usr/lib/tmpfiles.d/dbus.conf # Fields: type; path; mode; uid; gid; age; argument (symlink target) # Make ${localstatedir}/lib/dbus (required for systemd < 237) # Adjust mode and ownership if it already exists. d /var/lib/dbus 0755 - - - # Make ${localstatedir}/lib/dbus/machine-id a symlink to /etc/machine-id # if it does not already exist L /var/lib/dbus/machine-id - - - - /etc/machine-id # /usr/lib/tmpfiles.d/debian.conf # This file is part of the debianisation of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details # Type Path Mode UID GID Age Argument L /run/shm - - - - /dev/shm d /run/sendsigs.omit.d 0755 root root - d /run/lock 1777 root root - - L+ /etc/mtab - - - - ../proc/self/mounts L+ /etc/default/locale - - - - ../locale.conf L+ /etc/vconsole.conf - - - - default/keyboard # /usr/lib/tmpfiles.d/home.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. Q /home 0755 - - - q /srv 0755 - - - # /usr/lib/tmpfiles.d/journal-nocow.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Set the NOCOW attribute for directories of journal files. This flag # is inherited by their new files and sub-directories. Matters only # for btrfs filesystems. # # WARNING: Enabling the NOCOW attribute improves journal performance # substantially, but also disables the btrfs checksum logic. In # btrfs RAID filesystems the checksums are needed for rebuilding # corrupted files. Without checksums such rebuilds are not # possible. # # In a single-disk filesystem (or a filesystem without redundancy) # enabling the NOCOW attribute for journal files is safe, because # they have their own checksums and a rebuilding wouldn't be possible # in any case. h /var/log/journal - - - - +C h /var/log/journal/%m - - - - +C h /var/log/journal/remote - - - - +C # /usr/lib/tmpfiles.d/legacy.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # The functionality provided by these files and directories has been replaced # by newer interfaces. Their use is discouraged on legacy-free systems. This # configuration is provided to maintain backward compatibility. d /run/lock 0755 root root - L /var/lock - - - - ../run/lock L$ /var/log/README - - - - ../../usr/share/doc/systemd/README.logs # /run/lock/subsys is used for serializing SysV service execution, and # hence without use on SysV-less systems. d /run/lock/subsys 0755 root root - # /forcefsck, /fastboot and /forcequotacheck are deprecated in favor of the # kernel command line options 'fsck.mode=force', 'fsck.mode=skip' and # 'quotacheck.mode=force' r! /forcefsck r! /fastboot r! /forcequotacheck # /usr/lib/tmpfiles.d/libselinux1.conf # See tmpfiles.d(5) for details # Type Path Mode UID GID Age Argument d /run/setrans 0755 root root - - # /usr/lib/tmpfiles.d/man-db.conf d /var/cache/man 0755 man man a:1w x /var/cache/man/index* x /var/cache/man/*/index* # /usr/lib/tmpfiles.d/openssh-client.conf x /tmp/ssh-* # /usr/lib/tmpfiles.d/passwd.conf # If a password operation is in progress and we lose power, stale lockfiles # can be left behind. Clear them on boot. r! /etc/gshadow.lock r! /etc/shadow.lock r! /etc/passwd.lock r! /etc/group.lock r! /etc/subuid.lock r! /etc/subgid.lock # /usr/lib/tmpfiles.d/polkit-tmpfiles.conf d /etc/polkit-1/rules.d 0750 root polkitd - - # /usr/lib/tmpfiles.d/provision.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Provision additional login messages from credentials, if they are set. Note # that these lines are NOPs if the credentials are not set or if the files # already exist. f^ /etc/motd.d/50-provision.conf - - - - login.motd f^ /etc/issue.d/50-provision.conf - - - - login.issue # Provision a /etc/hosts file from credentials. f^ /etc/hosts - - - - network.hosts # Provision SSH key for root d- /root :0700 root :root - d- /root/.ssh :0700 root :root - f^ /root/.ssh/authorized_keys :0600 root :root - ssh.authorized_keys.root # /usr/lib/tmpfiles.d/static-nodes-permissions.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # This file adds permissions on top of static-nodes.conf generated by # kmod-static-nodes.service. Rules specified here should match the # permissions specified for udev in 50-udev-default.rules. z /dev/snd/seq 0660 - audio - z /dev/snd/timer 0660 - audio - z /dev/loop-control 0660 - disk - z /dev/net/tun 0666 - - - z /dev/fuse 0666 - - - z /dev/vfio/vfio 0666 - - - z /dev/kvm 0660 - kvm - z /dev/vhost-net 0660 - kvm - z /dev/vhost-vsock 0660 - kvm - # /usr/lib/tmpfiles.d/systemd-network.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. d$ /run/systemd/netif 0755 systemd-network systemd-network - d$ /run/systemd/netif/links 0755 systemd-network systemd-network - d$ /run/systemd/netif/leases 0755 systemd-network systemd-network - d$ /var/lib/systemd/network 0755 systemd-network systemd-network - # /usr/lib/tmpfiles.d/systemd-nologin.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5), systemd-user-sessions.service(8) and pam_nologin(8). f+! /run/nologin 0644 - - - "System is booting up. Unprivileged users are not permitted to log in yet. Please come back later. For technical details, see pam_nologin(8)." # /usr/lib/tmpfiles.d/systemd-pstore.conf # SPDX-License-Identifier: LGPL-2.1-or-later # # The systemd-pstore.service(1) archives the contents of /sys/fs/pstore # upon boot so that there is room for a subsequent dump. This service # is enabled with: # systemctl enable systemd-pstore # # With the service enabled, the kernel still needs to be configured # to write data into the pstore. The kernel has two parameters, # crash_kexec_post_notifiers and printk.always_kmsg_dump, that # control writes into pstore. # # The crash_kexec_post_notifiers parameter enables the kernel to write # dmesg (including stack trace) into pstore upon a panic even if kdump # is loaded, only needed if you want to use pstore with kdump. Without # this parameter, kdump could block writing to pstore for stability # reason. Note this increases the risk of kdump failure even if pstore # is not available. # # The printk.always_kmsg_dump parameter enables the kernel to write dmesg # upon a normal shutdown (shutdown, reboot, halt). # # To configure the kernel parameters, uncomment the appropriate # lines below. The value written is either 'Y' to enable the # kernel parameter, or 'N' to disable the kernel parameter. # # After making a change to this file, do: # systemd-tmpfiles --create path/to/tmpfiles.d/systemd-pstore.conf # # These changes are automatically applied on future re-boots. d /var/lib/systemd/pstore 0755 root root 14d #w- /sys/module/printk/parameters/always_kmsg_dump - - - - Y #w- /sys/module/kernel/parameters/crash_kexec_post_notifiers - - - - Y # /usr/lib/tmpfiles.d/systemd-tmp.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Exclude namespace mountpoints created with PrivateTmp=yes x /tmp/systemd-private-%b-* X /tmp/systemd-private-%b-*/tmp x /var/tmp/systemd-private-%b-* X /var/tmp/systemd-private-%b-*/tmp # Remove top-level private temporary directories on each boot R! /tmp/systemd-private-* R! /var/tmp/systemd-private-* # Handle lost systemd-coredump temp files. They could be lost on old filesystems, # for example, after hard reboot. x /var/lib/systemd/coredump/.#core*.%b* r! /var/lib/systemd/coredump/.#* # /usr/lib/tmpfiles.d/systemd.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. d /run/user 0755 root root - d /run/systemd/ask-password 0755 root root - d$ /run/systemd/seats 0755 root root - d$ /run/systemd/sessions 0755 root root - d$ /run/systemd/users 0755 root root - d /run/systemd/machines 0755 root root - d$ /run/systemd/shutdown 0755 root root - d /run/log 0755 root root - z /run/log/journal 2755 root systemd-journal - - Z /run/log/journal/%m ~2750 root systemd-journal - - a+ /run/log/journal - - - - d:group::r-x,d:group:adm:r-x,group::r-x,group:adm:r-x A+ /run/log/journal/%m - - - - d:group:adm:r-x,group:adm:r-X z /var/log/journal 2755 root systemd-journal - - z /var/log/journal/%m 2755 root systemd-journal - - z /var/log/journal/%m/system.journal 0640 root systemd-journal - - a+ /var/log/journal - - - - d:group::r-x,d:group:adm:r-x,group::r-x,group:adm:r-x a+ /var/log/journal/%m - - - - d:group:adm:r-x,group:adm:r-x a+ /var/log/journal/%m/system.journal - - - - group:adm:r-- d /var/lib/systemd 0755 root root - d /var/lib/systemd/coredump 0755 root root 2w # Files and directories in /var/lib/systemd/ephemeral-trees are locked by pid 1 to prevent tmpfiles from # removing them, and tmpfiles is told to clean up anything in /var/lib/systemd/ephemeral-trees that isn't # locked unconditionally. d /var/lib/systemd/ephemeral-trees 0755 root root 0 d /var/lib/private 0700 root root - d /var/log/private 0700 root root - d /var/cache/private 0700 root root - # /usr/lib/tmpfiles.d/tmp.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Clear tmp directories separately, to make them easier to override q /tmp 1777 root root 10d q /var/tmp 1777 root root 30d # /usr/lib/tmpfiles.d/var.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. q /var 0755 - - - L /var/run - - - - ../run d /var/log 0755 - - - d /var/cache 0755 - - - d /var/lib 0755 - - - d /var/spool 0755 - - - # /usr/lib/tmpfiles.d/x11.conf # This file is part of systemd. # # systemd is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation; either version 2.1 of the License, or # (at your option) any later version. # See tmpfiles.d(5) for details. # Make sure these are created by default so that nobody else can # or empty them at startup D! /tmp/.X11-unix 1777 root root 10d D! /tmp/.ICE-unix 1777 root root 10d D! /tmp/.XIM-unix 1777 root root 10d D! /tmp/.font-unix 1777 root root 10d # Unlink the X11 lock files r! /tmp/.X[0-9]*-lock 22m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi', 'systemd-tmpfiles', '--cat-config'] 22m20.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi'] 22m33.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi'] 22m34.2s INFO: IGNORED broken symlink: /etc/vconsole.conf (flag L+ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 22m34.3s INFO: IGNORED broken symlink: /etc/default/locale (flag L+ systemd-tmpfiles snippet /usr/lib/tmpfiles.d/debian.conf) 22m37.2s INFO: IGNORED broken symlink: /usr/lib/jvm/java-21-openjdk-amd64/lib/src.zip 22m58.2s ERROR: FAIL: Broken symlinks: /usr/lib/transdecoder/util/__pwm_tests/pasa_assemblies.fasta.gz -> ../../sample_data/pasa_example/pasa_assemblies.fasta.gz (transdecoder) /usr/lib/jvm/openjdk-21/src.zip -> lib/src.zip (openjdk-21-jdk:amd64) /usr/lib/x86_64-linux-gnu/qt-default/qtchooser/default.conf -> ../../../../share/qtchooser/qt5-x86_64-linux-gnu.conf (libqt5core5t64:amd64) /usr/share/gbrowse/htdocs/i -> /var/cache/gbrowse/images (gbrowse) /usr/share/BALL-1.5/BALLView/html -> ../../doc/libball1.5-data/BALLView/html (libball1.5-data) /usr/share/nodejs/clipboard/demo -> ../../doc/node-clipboard/demo (node-clipboard) /usr/share/man/man1/rdbg.1.gz -> rdbg3.3.1.gz (ruby) 23m11.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/shm'] 23m11.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/shm'] 23m11.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/console'] 23m11.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/console'] 23m11.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/ptmx'] 23m11.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/ptmx'] 23m11.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/pts'] 23m11.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/dev/pts'] 23m11.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/proc'] 23m11.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi/proc'] 23m11.0s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi'] 23m17.2s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpc1oi4qhi'] 23m17.2s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpc1oi4qhi 23m17.2s ERROR: piuparts run ends. ret=1 End: 2025-03-21 21:26:23 GMT