Start: 2024-01-13 05:11:00 GMT Package: libfast5-dev Source: fast5 Version: 0.6.5-7 Installed-Size: 349 Maintainer: Debian Med Packaging Team Architecture: all Depends: libhdf5-dev | libhdf5-mpich-dev | libhdf5-openmpi-dev Description: library for reading Oxford Nanopore Fast5 files -- headers Homepage: https://github.com/mateidavid/fast5 Description-md5: d4bbcfc228087168e05149e89c443049 Tag: devel::lang:c++, devel::library, implemented-in::c++, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/f/fast5/libfast5-dev_0.6.5-7_all.deb Size: 50188 MD5sum: 97fd0d10ad02c08b52b2dee07b49ee20 SHA256: 1eaacf26fed439b5868fbe1705dea0725dbd1a38d96bba9d89bafc9d3ebb15e8 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-no-usr-share-doc --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt libfast5-dev=0.6.5-7 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.2 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-no-usr-share-doc --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt libfast5-dev=0.6.5-7 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-27-amd64 #1 SMP Debian 5.10.205-2 (2023-12-31) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp4xrscuws 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp4xrscuws 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m1.8s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m1.8s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/proc'] 0m1.8s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/proc'] 0m1.8s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/pts'] 0m1.8s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/pts'] 0m1.8s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/ptmx'] 0m1.8s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/ptmx'] 0m1.8s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/console'] 0m1.8s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/console'] 0m1.8s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/shm'] 0m1.8s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/shm'] 0m1.8s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m1.8s DEBUG: Created policy-rc.d and chmodded it. 0m1.8s DEBUG: Created resolv.conf. 0m1.8s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp4xrscuws/tmp/scripts/ 0m1.8s DEBUG: Copying scriptsdir /etc/piuparts/scripts-no-usr-share-doc to /srv/piuparts.debian.org/tmp/tmp4xrscuws/tmp/scripts/ 0m1.8s INFO: Running scripts post_chroot_unpack 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', 'update'] 0m5.1s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [198 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9653 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7099 kB] Fetched 16.9 MB in 2s (7381 kB/s) Reading package lists... 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', 'update'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', '-yf', 'dist-upgrade'] 0m6.2s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: perl-base tar 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2457 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 perl-base amd64 5.38.2-3 [1643 kB] Get:2 http://deb.debian.org/debian sid/main amd64 tar amd64 1.35+dfsg-3 [813 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2457 kB in 0s (44.5 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5229 files and directories currently installed.) Preparing to unpack .../perl-base_5.38.2-3_amd64.deb ... Unpacking perl-base (5.38.2-3) over (5.38.2-2) ... Setting up perl-base (5.38.2-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5229 files and directories currently installed.) Preparing to unpack .../tar_1.35+dfsg-3_amd64.deb ... Unpacking tar (1.35+dfsg-3) over (1.35+dfsg-2) ... Setting up tar (1.35+dfsg-3) ... 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', '-yf', 'dist-upgrade'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.5s DUMP: 3d94b21b96238444a89c4c4ac0fbb996 - 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.5s INFO: Running scripts post_setup 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_disable_usr_share_doc'] 0m6.5s DUMP: dpkg-query: no packages found matching systemd dpkg-query: no packages found matching systemd-sysv dpkg-query: no packages found matching sysv-rc 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_disable_usr_share_doc'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_dummy_users'] 0m7.2s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_dummy_users'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_forbid_home'] 0m7.2s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_forbid_home'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.2s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_minimize'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_minimize'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_zz_backports'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_setup_zz_backports'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', 'clean'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', 'clean'] 0m7.3s DEBUG: Recording chroot state 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DUMP: install ok installed apt apt 2.7.9 install ok installed base-files base-files 13 install ok installed base-passwd base-passwd 3.6.3 install ok installed bash bash 5.2.21-2 install ok installed bsdutils bsdutils 1:2.39.3-6 install ok installed coreutils coreutils 9.4-3+b1 install ok installed dash dash 0.5.12-6 install ok installed debconf debconf 1.5.83 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.16 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.2 install ok installed e2fsprogs e2fsprogs 1.47.0-2+b1 install ok installed findutils findutils 4.9.0-5 install ok installed gcc-13-base:amd64 gcc-13-base 13.2.0-9 install ok installed gpgv gpgv 2.2.40-1.1+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.1-4 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.7.9 install ok installed libattr1:amd64 libattr1 1:2.5.1-5 install ok installed libaudit-common libaudit-common 1:3.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-1 install ok installed libblkid1:amd64 libblkid1 2.39.3-6 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b2 install ok installed libc-bin libc-bin 2.37-13 install ok installed libc6:amd64 libc6 2.37-13 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.4-1 install ok installed libcap2:amd64 libcap2 1:2.66-4+b2 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-4+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.271 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2+b1 install ok installed libffi8:amd64 libffi8 3.4.4-2 install ok installed libgcc-s1:amd64 libgcc-s1 13.2.0-9 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.3-2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2 install ok installed libgnutls30:amd64 libgnutls30 3.8.2-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.47-3 install ok installed libhogweed6:amd64 libhogweed6 3.9.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.4-1+b2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1+b2 install ok installed liblzma5:amd64 liblzma5 5.4.5-0.3 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.39.3-6 install ok installed libnettle8:amd64 libnettle8 3.9.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.3-4 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-9.1+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-9.1+b1 install ok installed libpam-runtime libpam-runtime 1.5.2-9.1 install ok installed libpam0g:amd64 libpam0g 1.5.2-9.1+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1 install ok installed libselinux1:amd64 libselinux1 3.5-1+b2 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b2 install ok installed libsepol2:amd64 libsepol2 3.5-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.39.3-6 install ok installed libss2:amd64 libss2 1.47.0-2+b1 install ok installed libssl3:amd64 libssl3 3.1.4-2 install ok installed libstdc++6:amd64 libstdc++6 13.2.0-9 install ok installed libsystemd0:amd64 libsystemd0 255.2-4 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.4+20231209-1 install ok installed libudev1:amd64 libudev1 255.2-4 install ok installed libunistring5:amd64 libunistring5 1.1-2 install ok installed libuuid1:amd64 libuuid1 2.39.3-6 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-2 install ok installed login login 1:4.13+dfsg1-3+b1 install ok installed logsave logsave 1.47.0-2+b1 install ok installed mawk mawk 1.3.4.20231126-1 install ok installed mount mount 2.39.3-6 install ok installed ncurses-base ncurses-base 6.4+20231209-1 install ok installed ncurses-bin ncurses-bin 6.4+20231209-1 install ok installed passwd passwd 1:4.13+dfsg1-3+b1 install ok installed perl-base perl-base 5.38.2-3 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.08-5 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2023d-1 install ok installed usr-is-merged usr-is-merged 38 install ok installed util-linux util-linux 2.39.3-6 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg-3 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg-divert', '--list'] 0m7.7s DUMP: local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg-divert', '--list'] 0m7.7s INFO: Running scripts is_testable 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/is_testable_uninstallable'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/is_testable_uninstallable'] 0m7.7s INFO: apt-cache does not know about any of the requested packages 0m7.7s INFO: Running scripts pre_test 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_test_exceptions'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_test_exceptions'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_test_root_password'] 0m7.7s DUMP: New password: Retype new password: passwd: password updated successfully 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_test_root_password'] 0m7.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m8.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m8.5s DEBUG: No broken symlinks as far as we can find. 0m8.5s INFO: Running scripts pre_install 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_database-server'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_database-server'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_exceptions'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_exceptions'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_extras'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_extras'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m8.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m9.2s DEBUG: No broken symlinks as far as we can find. 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-cache', 'policy'] 0m9.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-cache', 'policy'] 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-cache', 'policy', 'libfast5-dev'] 0m9.9s DUMP: libfast5-dev: Installed: (none) Candidate: 0.6.5-7 Version table: 0.6.5-7 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-cache', 'policy', 'libfast5-dev'] 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', '-y', 'install', 'libfast5-dev=0.6.5-7'] 0m13.7s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: hdf5-helpers libaec-dev libaec0 libbrotli1 libc-dev-bin libc6-dev libcrypt-dev libcurl4 libcurl4-openssl-dev libgfortran5 libgssapi-krb5-2 libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libnghttp2-14 libnsl-dev libnsl2 libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1 libssl-dev libsz2 libtirpc-common libtirpc-dev libtirpc3 linux-libc-dev rpcsvc-proto zlib1g-dev Suggested packages: glibc-doc manpages-dev libcurl4-doc libidn-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev pkg-config krb5-doc krb5-user libhdf5-doc libssl-doc Recommended packages: manpages manpages-dev libc-devtools ca-certificates krb5-locales libldap-common publicsuffix libsasl2-modules The following NEW packages will be installed: hdf5-helpers libaec-dev libaec0 libbrotli1 libc-dev-bin libc6-dev libcrypt-dev libcurl4 libcurl4-openssl-dev libfast5-dev libgfortran5 libgssapi-krb5-2 libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libnghttp2-14 libnsl-dev libnsl2 libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1 libssl-dev libsz2 libtirpc-common libtirpc-dev libtirpc3 linux-libc-dev rpcsvc-proto zlib1g-dev 0 upgraded, 43 newly installed, 0 to remove and 0 not upgraded. Need to get 16.3 MB of archives. After this operation, 71.6 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 hdf5-helpers amd64 1.10.10+repack-3 [23.2 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libaec0 amd64 1.1.2-1 [23.4 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libsz2 amd64 1.1.2-1 [7684 B] Get:4 http://deb.debian.org/debian sid/main amd64 libaec-dev amd64 1.1.2-1 [20.9 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libc-dev-bin amd64 2.37-13 [46.6 kB] Get:7 http://deb.debian.org/debian sid/main amd64 linux-libc-dev all 6.6.9-1 [2222 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libcrypt-dev amd64 1:4.4.36-4 [119 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.20.1-5 [32.9 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.20.1-5 [79.6 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-2+b2 [9140 B] Get:12 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.20.1-5 [332 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.20.1-5 [135 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libtirpc-common all 1.3.4+ds-1 [10.7 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libtirpc3 amd64 1.3.4+ds-1 [82.1 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libnsl2 amd64 1.3.0-3 [40.0 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libtirpc-dev amd64 1.3.4+ds-1 [188 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libnsl-dev amd64 1.3.0-3 [66.9 kB] Get:19 http://deb.debian.org/debian sid/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libc6-dev amd64 2.37-13 [1902 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-4+b1 [19.7 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-4+b1 [57.0 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5+b3 [184 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.58.0-1 [74.1 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libpsl5 amd64 0.21.2-1+b1 [59.1 kB] Get:26 http://deb.debian.org/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libssh2-1 amd64 1.11.0-4 [215 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libcurl4 amd64 8.5.0-2 [427 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libcurl4-openssl-dev amd64 8.5.0-2 [531 kB] Get:30 http://deb.debian.org/debian sid/main amd64 libhdf5-103-1 amd64 1.10.10+repack-3 [1243 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 13.2.0-9 [804 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libhdf5-fortran-102 amd64 1.10.10+repack-3 [88.5 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-100 amd64 1.10.10+repack-3 [62.9 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-fortran-100 amd64 1.10.10+repack-3 [40.0 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libhdf5-cpp-103-1 amd64 1.10.10+repack-3 [130 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-cpp-100 amd64 1.10.10+repack-3 [20.9 kB] Get:37 http://deb.debian.org/debian sid/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3 [918 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo amd64 1:2.1.5-2+b2 [167 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-2+b2 [290 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libjpeg-dev amd64 1:2.1.5-2+b2 [72.1 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libssl-dev amd64 3.1.4-2 [2470 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libhdf5-dev amd64 1.10.10+repack-3 [2638 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libfast5-dev all 0.6.5-7 [50.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 16.3 MB in 0s (111 MB/s) Selecting previously unselected package hdf5-helpers. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5231 files and directories currently installed.) Preparing to unpack .../00-hdf5-helpers_1.10.10+repack-3_amd64.deb ... Unpacking hdf5-helpers (1.10.10+repack-3) ... Selecting previously unselected package libaec0:amd64. Preparing to unpack .../01-libaec0_1.1.2-1_amd64.deb ... Unpacking libaec0:amd64 (1.1.2-1) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../02-libsz2_1.1.2-1_amd64.deb ... Unpacking libsz2:amd64 (1.1.2-1) ... Selecting previously unselected package libaec-dev:amd64. Preparing to unpack .../03-libaec-dev_1.1.2-1_amd64.deb ... Unpacking libaec-dev:amd64 (1.1.2-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../04-libbrotli1_1.1.0-2+b3_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b3) ... Selecting previously unselected package libc-dev-bin. Preparing to unpack .../05-libc-dev-bin_2.37-13_amd64.deb ... Unpacking libc-dev-bin (2.37-13) ... Selecting previously unselected package linux-libc-dev. Preparing to unpack .../06-linux-libc-dev_6.6.9-1_all.deb ... Unpacking linux-libc-dev (6.6.9-1) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../07-libcrypt-dev_1%3a4.4.36-4_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.36-4) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../08-libkrb5support0_1.20.1-5_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-5) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../09-libk5crypto3_1.20.1-5_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-5) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../10-libkeyutils1_1.6.3-2+b2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-2+b2) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../11-libkrb5-3_1.20.1-5_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-5) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../12-libgssapi-krb5-2_1.20.1-5_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-5) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../13-libtirpc-common_1.3.4+ds-1_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1) ... Selecting previously unselected package libtirpc3:amd64. Preparing to unpack .../14-libtirpc3_1.3.4+ds-1_amd64.deb ... Unpacking libtirpc3:amd64 (1.3.4+ds-1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../15-libnsl2_1.3.0-3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../16-libtirpc-dev_1.3.4+ds-1_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.4+ds-1) ... Selecting previously unselected package libnsl-dev:amd64. Preparing to unpack .../17-libnsl-dev_1.3.0-3_amd64.deb ... Unpacking libnsl-dev:amd64 (1.3.0-3) ... Selecting previously unselected package rpcsvc-proto. Preparing to unpack .../18-rpcsvc-proto_1.4.3-1_amd64.deb ... Unpacking rpcsvc-proto (1.4.3-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../19-libc6-dev_2.37-13_amd64.deb ... Unpacking libc6-dev:amd64 (2.37-13) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../20-libsasl2-modules-db_2.1.28+dfsg1-4+b1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../21-libsasl2-2_2.1.28+dfsg1-4+b1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../22-libldap-2.5-0_2.5.13+dfsg-5+b3_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../23-libnghttp2-14_1.58.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.58.0-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../24-libpsl5_0.21.2-1+b1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.2-1+b1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../25-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../26-libssh2-1_1.11.0-4_amd64.deb ... Unpacking libssh2-1:amd64 (1.11.0-4) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../27-libcurl4_8.5.0-2_amd64.deb ... Unpacking libcurl4:amd64 (8.5.0-2) ... Selecting previously unselected package libcurl4-openssl-dev:amd64. Preparing to unpack .../28-libcurl4-openssl-dev_8.5.0-2_amd64.deb ... Unpacking libcurl4-openssl-dev:amd64 (8.5.0-2) ... Selecting previously unselected package libhdf5-103-1:amd64. Preparing to unpack .../29-libhdf5-103-1_1.10.10+repack-3_amd64.deb ... Unpacking libhdf5-103-1:amd64 (1.10.10+repack-3) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../30-libgfortran5_13.2.0-9_amd64.deb ... Unpacking libgfortran5:amd64 (13.2.0-9) ... Selecting previously unselected package libhdf5-fortran-102:amd64. Preparing to unpack .../31-libhdf5-fortran-102_1.10.10+repack-3_amd64.deb ... Unpacking libhdf5-fortran-102:amd64 (1.10.10+repack-3) ... Selecting previously unselected package libhdf5-hl-100:amd64. Preparing to unpack .../32-libhdf5-hl-100_1.10.10+repack-3_amd64.deb ... Unpacking libhdf5-hl-100:amd64 (1.10.10+repack-3) ... Selecting previously unselected package libhdf5-hl-fortran-100:amd64. Preparing to unpack .../33-libhdf5-hl-fortran-100_1.10.10+repack-3_amd64.deb ... Unpacking libhdf5-hl-fortran-100:amd64 (1.10.10+repack-3) ... Selecting previously unselected package libhdf5-cpp-103-1:amd64. Preparing to unpack .../34-libhdf5-cpp-103-1_1.10.10+repack-3_amd64.deb ... Unpacking libhdf5-cpp-103-1:amd64 (1.10.10+repack-3) ... Selecting previously unselected package libhdf5-hl-cpp-100:amd64. Preparing to unpack .../35-libhdf5-hl-cpp-100_1.10.10+repack-3_amd64.deb ... Unpacking libhdf5-hl-cpp-100:amd64 (1.10.10+repack-3) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../36-zlib1g-dev_1%3a1.3.dfsg-3_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../37-libjpeg62-turbo_1%3a2.1.5-2+b2_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-2+b2) ... Selecting previously unselected package libjpeg62-turbo-dev:amd64. Preparing to unpack .../38-libjpeg62-turbo-dev_1%3a2.1.5-2+b2_amd64.deb ... Unpacking libjpeg62-turbo-dev:amd64 (1:2.1.5-2+b2) ... Selecting previously unselected package libjpeg-dev:amd64. Preparing to unpack .../39-libjpeg-dev_1%3a2.1.5-2+b2_amd64.deb ... Unpacking libjpeg-dev:amd64 (1:2.1.5-2+b2) ... Selecting previously unselected package libssl-dev:amd64. Preparing to unpack .../40-libssl-dev_3.1.4-2_amd64.deb ... Unpacking libssl-dev:amd64 (3.1.4-2) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../41-libhdf5-dev_1.10.10+repack-3_amd64.deb ... Unpacking libhdf5-dev (1.10.10+repack-3) ... Selecting previously unselected package libfast5-dev. Preparing to unpack .../42-libfast5-dev_0.6.5-7_all.deb ... Unpacking libfast5-dev (0.6.5-7) ... Setting up libkeyutils1:amd64 (1.6.3-2+b2) ... Setting up libpsl5:amd64 (0.21.2-1+b1) ... Setting up hdf5-helpers (1.10.10+repack-3) ... Setting up libtirpc-common (1.3.4+ds-1) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libnghttp2-14:amd64 (1.58.0-1) ... Setting up linux-libc-dev (6.6.9-1) ... Setting up libaec0:amd64 (1.1.2-1) ... Setting up libkrb5support0:amd64 (1.20.1-5) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Setting up rpcsvc-proto (1.4.3-1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-2+b2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libssl-dev:amd64 (3.1.4-2) ... Setting up libk5crypto3:amd64 (1.20.1-5) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Setting up libgfortran5:amd64 (13.2.0-9) ... Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... Setting up libssh2-1:amd64 (1.11.0-4) ... Setting up libkrb5-3:amd64 (1.20.1-5) ... Setting up libc-dev-bin (2.37-13) ... Setting up libsz2:amd64 (1.1.2-1) ... Setting up libaec-dev:amd64 (1.1.2-1) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-5) ... Setting up libcurl4:amd64 (8.5.0-2) ... Setting up libtirpc3:amd64 (1.3.4+ds-1) ... Setting up libtirpc-dev:amd64 (1.3.4+ds-1) ... Setting up libcurl4-openssl-dev:amd64 (8.5.0-2) ... Setting up libhdf5-103-1:amd64 (1.10.10+repack-3) ... Setting up libnsl2:amd64 (1.3.0-3) ... Setting up libhdf5-cpp-103-1:amd64 (1.10.10+repack-3) ... Setting up libhdf5-hl-100:amd64 (1.10.10+repack-3) ... Setting up libhdf5-hl-cpp-100:amd64 (1.10.10+repack-3) ... Setting up libhdf5-fortran-102:amd64 (1.10.10+repack-3) ... Setting up libnsl-dev:amd64 (1.3.0-3) ... Setting up libhdf5-hl-fortran-100:amd64 (1.10.10+repack-3) ... Setting up libc6-dev:amd64 (2.37-13) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-2+b2) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3) ... Setting up libjpeg-dev:amd64 (1:2.1.5-2+b2) ... Setting up libhdf5-dev (1.10.10+repack-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libfast5-dev (0.6.5-7) ... Processing triggers for libc-bin (2.37-13) ... 0m13.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', '-y', 'install', 'libfast5-dev=0.6.5-7'] 0m13.7s INFO: Running scripts post_install 0m13.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_install_exceptions'] 0m13.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_install_exceptions'] 0m13.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m14.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m15.2s ERROR: WARN: Broken symlinks: /usr/share/doc/libhdf5-dev/RELEASE.txt.gz -> changelog.gz (libhdf5-dev) /usr/share/doc/libhdf5-hl-cpp-100/RELEASE.txt.gz -> changelog.gz (libhdf5-hl-cpp-100:amd64) /usr/share/doc/libhdf5-cpp-103-1/RELEASE.txt.gz -> changelog.gz (libhdf5-cpp-103-1:amd64) /usr/share/doc/libhdf5-hl-fortran-100/RELEASE.txt.gz -> changelog.gz (libhdf5-hl-fortran-100:amd64) /usr/share/doc/libhdf5-hl-100/RELEASE.txt.gz -> changelog.gz (libhdf5-hl-100:amd64) /usr/share/doc/libhdf5-fortran-102/RELEASE.txt.gz -> changelog.gz (libhdf5-fortran-102:amd64) /usr/share/doc/libhdf5-103-1/RELEASE.txt.gz -> changelog.gz (libhdf5-103-1:amd64) /usr/share/doc/hdf5-helpers/RELEASE.txt.gz -> changelog.gz (hdf5-helpers) 0m15.2s INFO: /bin converted to /usr/bin by /usr merge 0m15.3s INFO: /lib converted to /usr/lib by /usr merge 0m15.3s INFO: /lib/init converted to /usr/lib/init by /usr merge 0m15.3s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 0m15.3s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 0m15.3s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 0m15.3s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 0m15.3s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 0m15.3s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 0m15.3s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 0m15.3s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 0m15.3s INFO: /lib64 converted to /usr/lib64 by /usr merge 0m15.3s INFO: /sbin converted to /usr/sbin by /usr merge 0m15.6s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', '-ac', '--ignore-obsolete'] 0m16.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', '-ac', '--ignore-obsolete'] 0m16.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m16.9s DUMP: 0.15.6 0m16.9s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m16.9s INFO: Running adequate version 0.15.6 now. 0m16.9s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'libfast5-dev'] 0m17.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'libfast5-dev'] 0m17.0s INFO: Running scripts pre_remove 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m17.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m17.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m17.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m17.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_exceptions'] 0m18.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/pre_remove_exceptions'] 0m18.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m18.6s DUMP: install ok installed apt apt 2.7.9 install ok installed base-files base-files 13 install ok installed base-passwd base-passwd 3.6.3 install ok installed bash bash 5.2.21-2 install ok installed bsdutils bsdutils 1:2.39.3-6 install ok installed coreutils coreutils 9.4-3+b1 install ok installed dash dash 0.5.12-6 install ok installed debconf debconf 1.5.83 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.16 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.2 install ok installed e2fsprogs e2fsprogs 1.47.0-2+b1 install ok installed findutils findutils 4.9.0-5 install ok installed gcc-13-base:amd64 gcc-13-base 13.2.0-9 install ok installed gpgv gpgv 2.2.40-1.1+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1 install ok installed hdf5-helpers hdf5-helpers 1.10.10+repack-3 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.1-4 install ok installed libaec-dev:amd64 libaec-dev 1.1.2-1 install ok installed libaec0:amd64 libaec0 1.1.2-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.7.9 install ok installed libattr1:amd64 libattr1 1:2.5.1-5 install ok installed libaudit-common libaudit-common 1:3.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-1 install ok installed libblkid1:amd64 libblkid1 2.39.3-6 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b2 install ok installed libc-bin libc-bin 2.37-13 install ok installed libc-dev-bin libc-dev-bin 2.37-13 install ok installed libc6:amd64 libc6 2.37-13 install ok installed libc6-dev:amd64 libc6-dev 2.37-13 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.4-1 install ok installed libcap2:amd64 libcap2 1:2.66-4+b2 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2+b1 install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.36-4 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libcurl4:amd64 libcurl4 8.5.0-2 install ok installed libcurl4-openssl-dev:amd64 libcurl4-openssl-dev 8.5.0-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-4+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.271 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2+b1 install ok installed libfast5-dev libfast5-dev 0.6.5-7 install ok installed libffi8:amd64 libffi8 3.4.4-2 install ok installed libgcc-s1:amd64 libgcc-s1 13.2.0-9 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.3-2 install ok installed libgfortran5:amd64 libgfortran5 13.2.0-9 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2 install ok installed libgnutls30:amd64 libgnutls30 3.8.2-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.47-3 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.20.1-5 install ok installed libhdf5-103-1:amd64 libhdf5-103-1 1.10.10+repack-3 install ok installed libhdf5-cpp-103-1:amd64 libhdf5-cpp-103-1 1.10.10+repack-3 install ok installed libhdf5-dev libhdf5-dev 1.10.10+repack-3 install ok installed libhdf5-fortran-102:amd64 libhdf5-fortran-102 1.10.10+repack-3 install ok installed libhdf5-hl-100:amd64 libhdf5-hl-100 1.10.10+repack-3 install ok installed libhdf5-hl-cpp-100:amd64 libhdf5-hl-cpp-100 1.10.10+repack-3 install ok installed libhdf5-hl-fortran-100:amd64 libhdf5-hl-fortran-100 1.10.10+repack-3 install ok installed libhogweed6:amd64 libhogweed6 3.9.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.4-1+b2 install ok installed libjpeg-dev:amd64 libjpeg-dev 1:2.1.5-2+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-2+b2 install ok installed libjpeg62-turbo-dev:amd64 libjpeg62-turbo-dev 1:2.1.5-2+b2 install ok installed libk5crypto3:amd64 libk5crypto3 1.20.1-5 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-2+b2 install ok installed libkrb5-3:amd64 libkrb5-3 1.20.1-5 install ok installed libkrb5support0:amd64 libkrb5support0 1.20.1-5 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.13+dfsg-5+b3 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1+b2 install ok installed liblzma5:amd64 liblzma5 5.4.5-0.3 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.39.3-6 install ok installed libnettle8:amd64 libnettle8 3.9.1-2 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.58.0-1 install ok installed libnsl-dev:amd64 libnsl-dev 1.3.0-3 install ok installed libnsl2:amd64 libnsl2 1.3.0-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.3-4 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-9.1+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-9.1+b1 install ok installed libpam-runtime libpam-runtime 1.5.2-9.1 install ok installed libpam0g:amd64 libpam0g 1.5.2-9.1+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4 install ok installed libpsl5:amd64 libpsl5 0.21.2-1+b1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-4+b1 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1 install ok installed libselinux1:amd64 libselinux1 3.5-1+b2 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b2 install ok installed libsepol2:amd64 libsepol2 3.5-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.39.3-6 install ok installed libss2:amd64 libss2 1.47.0-2+b1 install ok installed libssh2-1:amd64 libssh2-1 1.11.0-4 install ok installed libssl-dev:amd64 libssl-dev 3.1.4-2 install ok installed libssl3:amd64 libssl3 3.1.4-2 install ok installed libstdc++6:amd64 libstdc++6 13.2.0-9 install ok installed libsystemd0:amd64 libsystemd0 255.2-4 install ok installed libsz2:amd64 libsz2 1.1.2-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.4+20231209-1 install ok installed libtirpc-common libtirpc-common 1.3.4+ds-1 install ok installed libtirpc-dev:amd64 libtirpc-dev 1.3.4+ds-1 install ok installed libtirpc3:amd64 libtirpc3 1.3.4+ds-1 install ok installed libudev1:amd64 libudev1 255.2-4 install ok installed libunistring5:amd64 libunistring5 1.1-2 install ok installed libuuid1:amd64 libuuid1 2.39.3-6 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-2 install ok installed linux-libc-dev linux-libc-dev 6.6.9-1 install ok installed login login 1:4.13+dfsg1-3+b1 install ok installed logsave logsave 1.47.0-2+b1 install ok installed mawk mawk 1.3.4.20231126-1 install ok installed mount mount 2.39.3-6 install ok installed ncurses-base ncurses-base 6.4+20231209-1 install ok installed ncurses-bin ncurses-bin 6.4+20231209-1 install ok installed passwd passwd 1:4.13+dfsg1-3+b1 install ok installed perl-base perl-base 5.38.2-3 install ok installed rpcsvc-proto rpcsvc-proto 1.4.3-1 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.08-5 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2023d-1 install ok installed usr-is-merged usr-is-merged 38 install ok installed util-linux util-linux 2.39.3-6 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg-3 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.3.dfsg-3 0m18.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m18.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', 'remove', 'hdf5-helpers', 'libaec-dev:amd64', 'libaec0:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcrypt-dev:amd64', 'libcurl4:amd64', 'libcurl4-openssl-dev:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-103-1:amd64', 'libhdf5-cpp-103-1:amd64', 'libhdf5-dev', 'libhdf5-fortran-102:amd64', 'libhdf5-hl-100:amd64', 'libhdf5-hl-cpp-100:amd64', 'libhdf5-hl-fortran-100:amd64', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssh2-1:amd64', 'libssl-dev:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'linux-libc-dev', 'rpcsvc-proto', 'zlib1g-dev:amd64', 'libfast5-dev'] 0m19.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: hdf5-helpers libaec-dev libaec0 libbrotli1 libc-dev-bin libc6-dev libcrypt-dev libcurl4 libcurl4-openssl-dev libfast5-dev libgfortran5 libgssapi-krb5-2 libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libnghttp2-14 libnsl-dev libnsl2 libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1 libssl-dev libsz2 libtirpc-common libtirpc-dev libtirpc3 linux-libc-dev rpcsvc-proto zlib1g-dev 0 upgraded, 0 newly installed, 43 to remove and 0 not upgraded. After this operation, 71.6 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9213 files and directories currently installed.) Removing libfast5-dev (0.6.5-7) ... Removing libhdf5-dev (1.10.10+repack-3) ... Removing hdf5-helpers (1.10.10+repack-3) ... Removing libaec-dev:amd64 (1.1.2-1) ... Removing libhdf5-hl-fortran-100:amd64 (1.10.10+repack-3) ... Removing libhdf5-hl-cpp-100:amd64 (1.10.10+repack-3) ... Removing libhdf5-hl-100:amd64 (1.10.10+repack-3) ... Removing libhdf5-fortran-102:amd64 (1.10.10+repack-3) ... Removing libcurl4-openssl-dev:amd64 (8.5.0-2) ... Removing zlib1g-dev:amd64 (1:1.3.dfsg-3) ... Removing libjpeg-dev:amd64 (1:2.1.5-2+b2) ... Removing libjpeg62-turbo-dev:amd64 (1:2.1.5-2+b2) ... Removing libc6-dev:amd64 (2.37-13) ... Removing libc-dev-bin (2.37-13) ... Removing libcrypt-dev:amd64 (1:4.4.36-4) ... Removing libgfortran5:amd64 (13.2.0-9) ... Removing libnsl-dev:amd64 (1.3.0-3) ... Removing libtirpc-dev:amd64 (1.3.4+ds-1) ... Removing libnsl2:amd64 (1.3.0-3) ... Removing libtirpc3:amd64 (1.3.4+ds-1) ... Removing libhdf5-cpp-103-1:amd64 (1.10.10+repack-3) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-2+b2) ... Removing libssl-dev:amd64 (3.1.4-2) ... Removing libtirpc-common (1.3.4+ds-1) ... Removing linux-libc-dev (6.6.9-1) ... Removing rpcsvc-proto (1.4.3-1) ... Removing libhdf5-103-1:amd64 (1.10.10+repack-3) ... Removing libsz2:amd64 (1.1.2-1) ... Removing libaec0:amd64 (1.1.2-1) ... Removing libcurl4:amd64 (8.5.0-2) ... Removing libbrotli1:amd64 (1.1.0-2+b3) ... Removing libgssapi-krb5-2:amd64 (1.20.1-5) ... Removing libkrb5-3:amd64 (1.20.1-5) ... Removing libk5crypto3:amd64 (1.20.1-5) ... Removing libkeyutils1:amd64 (1.6.3-2+b2) ... Removing libkrb5support0:amd64 (1.20.1-5) ... Removing libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Removing libnghttp2-14:amd64 (1.58.0-1) ... Removing libpsl5:amd64 (0.21.2-1+b1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Removing libssh2-1:amd64 (1.11.0-4) ... Processing triggers for libc-bin (2.37-13) ... 0m19.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', 'remove', 'hdf5-helpers', 'libaec-dev:amd64', 'libaec0:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcrypt-dev:amd64', 'libcurl4:amd64', 'libcurl4-openssl-dev:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-103-1:amd64', 'libhdf5-cpp-103-1:amd64', 'libhdf5-dev', 'libhdf5-fortran-102:amd64', 'libhdf5-hl-100:amd64', 'libhdf5-hl-cpp-100:amd64', 'libhdf5-hl-fortran-100:amd64', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssh2-1:amd64', 'libssl-dev:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'linux-libc-dev', 'rpcsvc-proto', 'zlib1g-dev:amd64', 'libfast5-dev'] 0m19.6s INFO: Running scripts post_remove 0m19.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_remove_exceptions'] 0m19.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_remove_exceptions'] 0m19.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg', '--purge', 'hdf5-helpers', 'libaec-dev:amd64', 'libaec0:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcrypt-dev:amd64', 'libcurl4:amd64', 'libcurl4-openssl-dev:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-103-1:amd64', 'libhdf5-cpp-103-1:amd64', 'libhdf5-dev', 'libhdf5-fortran-102:amd64', 'libhdf5-hl-100:amd64', 'libhdf5-hl-cpp-100:amd64', 'libhdf5-hl-fortran-100:amd64', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssh2-1:amd64', 'libssl-dev:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'linux-libc-dev', 'rpcsvc-proto', 'zlib1g-dev:amd64'] 0m19.6s DUMP: dpkg: warning: ignoring request to remove hdf5-helpers which isn't installed dpkg: warning: ignoring request to remove libaec-dev which isn't installed dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed (Reading database ... 5232 files and directories currently installed.) Purging configuration files for libcrypt-dev:amd64 (1:4.4.36-4) ... dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libcurl4-openssl-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.20.1-5) ... dpkg: warning: ignoring request to remove libhdf5-103-1 which isn't installed dpkg: warning: ignoring request to remove libhdf5-cpp-103-1 which isn't installed dpkg: warning: ignoring request to remove libhdf5-dev which isn't installed dpkg: warning: ignoring request to remove libhdf5-fortran-102 which isn't installed dpkg: warning: ignoring request to remove libhdf5-hl-100 which isn't installed dpkg: warning: ignoring request to remove libhdf5-hl-cpp-100 which isn't installed dpkg: warning: ignoring request to remove libhdf5-hl-fortran-100 which isn't installed dpkg: warning: ignoring request to remove libjpeg-dev which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo-dev which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnsl-dev which isn't installed dpkg: warning: ignoring request to remove libnsl2 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libssl-dev which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed Purging configuration files for libtirpc-common (1.3.4+ds-1) ... dpkg: warning: ignoring request to remove libtirpc-dev which isn't installed dpkg: warning: ignoring request to remove libtirpc3 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed dpkg: warning: ignoring request to remove rpcsvc-proto which isn't installed dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed 0m19.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg', '--purge', 'hdf5-helpers', 'libaec-dev:amd64', 'libaec0:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcrypt-dev:amd64', 'libcurl4:amd64', 'libcurl4-openssl-dev:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-103-1:amd64', 'libhdf5-cpp-103-1:amd64', 'libhdf5-dev', 'libhdf5-fortran-102:amd64', 'libhdf5-hl-100:amd64', 'libhdf5-hl-cpp-100:amd64', 'libhdf5-hl-fortran-100:amd64', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssh2-1:amd64', 'libssl-dev:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'linux-libc-dev', 'rpcsvc-proto', 'zlib1g-dev:amd64'] 0m19.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg', '--purge', 'libfast5-dev'] 0m19.7s DUMP: dpkg: warning: ignoring request to remove libfast5-dev which isn't installed 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg', '--purge', 'libfast5-dev'] 0m19.7s INFO: Running scripts post_purge 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_purge_exceptions'] 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_purge_exceptions'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg', '--purge', '--pending'] 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg', '--purge', '--pending'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg', '--remove', '--pending'] 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg', '--remove', '--pending'] 0m19.7s INFO: Running scripts post_test 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_test_exceptions'] 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'tmp/scripts/post_test_exceptions'] 0m19.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m20.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m20.5s DEBUG: No broken symlinks as far as we can find. 0m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg-divert', '--list'] 0m20.5s DUMP: local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib 0m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'dpkg-divert', '--list'] 0m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', 'clean'] 0m20.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4xrscuws', 'apt-get', 'clean'] 0m20.6s DEBUG: Recording chroot state 0m21.0s INFO: PASS: Installation and purging test. 0m21.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/shm'] 0m21.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/shm'] 0m21.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/console'] 0m21.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/console'] 0m21.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/ptmx'] 0m21.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/ptmx'] 0m21.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/pts'] 0m21.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/dev/pts'] 0m21.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/proc'] 0m21.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4xrscuws/proc'] 0m21.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m21.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp4xrscuws'] 0m21.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp4xrscuws 0m21.7s INFO: PASS: All tests. 0m21.7s INFO: piuparts run ends. ret=0 End: 2024-01-13 05:11:22 GMT