Start: 2024-02-23 02:08:17 GMT Package: pycoqc Version: 2.5.2+dfsg-3 Installed-Size: 194 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3-h5py-serial, python3-jinja2, python3-numpy, python3-pandas, python3-plotly (>= 4.1.0), python3-pysam, python3-scipy, python3-tqdm, python3:any, python3-h5py Description: computes metrics and generates Interactive QC plots Homepage: https://github.com/a-slide/pycoQC Description-md5: 311c31394d7f1c34ec5bf3baa30e71f3 Section: science Priority: optional Filename: pool/main/p/pycoqc/pycoqc_2.5.2+dfsg-3_all.deb Size: 36292 MD5sum: 194d696d9a9f86f0f9c78b480b78e21c SHA256: 8c6c0674e144f450a00e804e1f63e8c39c8154168a741e4c5079477f67140fd2 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-no-usr-share-doc --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt pycoqc=2.5.2+dfsg-3 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.3.1~202401311836~1.3-2-g28295102 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-no-usr-share-doc --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt pycoqc=2.5.2+dfsg-3 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-28-amd64 #1 SMP Debian 5.10.209-2 (2024-01-31) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpmf0796r5 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpmf0796r5 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/proc'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/proc'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpmf0796r5/tmp/scripts/ 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts-no-usr-share-doc to /srv/piuparts.debian.org/tmp/tmpmf0796r5/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', 'update'] 0m1.7s DUMP: Hit:1 http://deb.debian.org/debian sid InRelease Reading package lists... 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', 'update'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', '-yf', 'dist-upgrade'] 0m2.4s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', '-yf', 'dist-upgrade'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.7s DUMP: 5aec518637e69ba488c9b37d871bb495 - 0m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.7s INFO: Running scripts post_setup 0m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_disable_usr_share_doc'] 0m2.7s DUMP: dpkg-query: no packages found matching systemd dpkg-query: no packages found matching systemd-sysv dpkg-query: no packages found matching sysv-rc 0m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_disable_usr_share_doc'] 0m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_dummy_users'] 0m3.8s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_dummy_users'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_forbid_home'] 0m3.9s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_forbid_home'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.9s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_minimize'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_minimize'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_zz_backports'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_setup_zz_backports'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', 'clean'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', 'clean'] 0m3.9s DEBUG: Recording chroot state 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.3s DUMP: install ok installed apt apt 2.7.12 install ok installed base-files base-files 13 install ok installed base-passwd base-passwd 3.6.3 install ok installed bash bash 5.2.21-2 install ok installed bsdutils bsdutils 1:2.39.3-6 install ok installed coreutils coreutils 9.4-3+b1 install ok installed dash dash 0.5.12-6 install ok installed debconf debconf 1.5.86 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.16 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.4 install ok installed e2fsprogs e2fsprogs 1.47.0-2+b1 install ok installed findutils findutils 4.9.0-5 install ok installed gcc-14-base:amd64 gcc-14-base 14-20240201-3 install ok installed gpgv gpgv 2.2.40-1.1+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.7.12 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-2 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-2 install ok installed libblkid1:amd64 libblkid1 2.39.3-6 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b2 install ok installed libc-bin libc-bin 2.37-15 install ok installed libc6:amd64 libc6 2.37-15 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.4-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-4+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.271+b1 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14-20240201-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.3-2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30:amd64 libgnutls30 3.8.3-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.47-3 install ok installed libhogweed6:amd64 libhogweed6 3.9.1-2+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1+b2 install ok installed liblzma5:amd64 liblzma5 5.4.5-0.3 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.39.3-6 install ok installed libnettle8:amd64 libnettle8 3.9.1-2+b1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.3-4 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-9.1+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-9.1+b1 install ok installed libpam-runtime libpam-runtime 1.5.2-9.1 install ok installed libpam0g:amd64 libpam0g 1.5.2-9.1+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1 install ok installed libselinux1:amd64 libselinux1 3.5-2 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b2 install ok installed libsepol2:amd64 libsepol2 3.5-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.39.3-6 install ok installed libss2:amd64 libss2 1.47.0-2+b1 install ok installed libssl3:amd64 libssl3 3.1.5-1 install ok installed libstdc++6:amd64 libstdc++6 14-20240201-3 install ok installed libsystemd0:amd64 libsystemd0 255.3-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.4+20240113-1 install ok installed libudev1:amd64 libudev1 255.3-2 install ok installed libunistring5:amd64 libunistring5 1.1-2 install ok installed libuuid1:amd64 libuuid1 2.39.3-6 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-2 install ok installed login login 1:4.13+dfsg1-4 install ok installed logsave logsave 1.47.0-2+b1 install ok installed mawk mawk 1.3.4.20240123-1 install ok installed mount mount 2.39.3-6 install ok installed ncurses-base ncurses-base 6.4+20240113-1 install ok installed ncurses-bin ncurses-bin 6.4+20240113-1 install ok installed passwd passwd 1:4.13+dfsg1-4 install ok installed perl-base perl-base 5.38.2-3 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.08-6 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.39.3-6 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg-3+b1 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg-divert', '--list'] 0m4.3s DUMP: local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg-divert', '--list'] 0m4.3s INFO: Running scripts is_testable 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/is_testable_uninstallable'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/is_testable_uninstallable'] 0m4.3s INFO: apt-cache does not know about any of the requested packages 0m4.3s INFO: Running scripts pre_test 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_test_exceptions'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_test_exceptions'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_test_root_password'] 0m4.4s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_test_root_password'] 0m4.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 0m4.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 0m5.1s DEBUG: No broken symlinks as far as we can find. 0m5.1s INFO: Running scripts pre_install 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_database-server'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_database-server'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_exceptions'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_exceptions'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_extras'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_extras'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 0m5.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 0m6.0s DEBUG: No broken symlinks as far as we can find. 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-cache', 'policy'] 0m7.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-cache', 'policy'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-cache', 'policy', 'pycoqc'] 0m7.1s DUMP: pycoqc: Installed: (none) Candidate: 2.5.2+dfsg-3 Version table: 2.5.2+dfsg-3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-cache', 'policy', 'pycoqc'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', '-y', 'install', 'pycoqc=2.5.2+dfsg-3'] 1m16.7s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: ca-certificates libaec0 libblas3 libbrotli1 libcurl3-gnutls libcurl4 libdeflate0 libexpat1 libgfortran5 libgssapi-krb5-2 libhdf5-103-1 libhdf5-hl-100 libhts3 libhtscodecs2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 libldap-2.5-0 liblzf1 libncursesw6 libnghttp2-14 libnsl2 libpsl5 libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib libpython3.12-minimal libpython3.12-stdlib libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libsz2 libtirpc-common libtirpc3 media-types netbase openssl python3 python3-attr python3-certifi python3-chardet python3-charset-normalizer python3-dateutil python3-decorator python3-distutils python3-editables python3-fastjsonschema python3-h5py python3-h5py-serial python3-hatch-vcs python3-hatchling python3-idna python3-jinja2 python3-jsonschema python3-jsonschema-specifications python3-jupyter-core python3-lib2to3 python3-markupsafe python3-minimal python3-nbformat python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pathspec python3-pkg-resources python3-platformdirs python3-plotly python3-pluggy python3-pysam python3-referencing python3-requests python3-rpds-py python3-scipy python3-setuptools python3-setuptools-scm python3-six python3-tenacity python3-tqdm python3-traitlets python3-trove-classifiers python3-typing-extensions python3-tz python3-urllib3 python3.11 python3.11-minimal python3.12 python3.12-minimal readline-common Suggested packages: krb5-doc krb5-user python3-doc python3-tk python3-venv python-attr-doc python-charset-normalizer-doc python-fastjsonschema-doc python-h5py-doc python-jinja2-doc python-jsonschema-doc python3-pip gcc gfortran python3-dev python3-pytest python-pandas-doc python3-statsmodels python3-matplotlib ipython3 python3-ipykernel python3-cryptography python3-openssl python3-socks python-requests-doc python-scipy-doc python-setuptools-doc python-tenacity-doc python3-brotli python3.11-venv python3.11-doc binutils binfmt-support python3.12-venv python3.12-doc readline-doc Recommended packages: krb5-locales libldap-common libgpm2 publicsuffix libsasl2-modules python3-babel python3-json-pointer python3-rfc3987 python3-uritemplate python3-webcolors python3-matplotlib python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-bs4 python3-html5lib python3-lxml python3-tables python3-numba g++ | c++-compiler python3-pil The following NEW packages will be installed: ca-certificates libaec0 libblas3 libbrotli1 libcurl3-gnutls libcurl4 libdeflate0 libexpat1 libgfortran5 libgssapi-krb5-2 libhdf5-103-1 libhdf5-hl-100 libhts3 libhtscodecs2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 libldap-2.5-0 liblzf1 libncursesw6 libnghttp2-14 libnsl2 libpsl5 libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib libpython3.12-minimal libpython3.12-stdlib libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libsz2 libtirpc-common libtirpc3 media-types netbase openssl pycoqc python3 python3-attr python3-certifi python3-chardet python3-charset-normalizer python3-dateutil python3-decorator python3-distutils python3-editables python3-fastjsonschema python3-h5py python3-h5py-serial python3-hatch-vcs python3-hatchling python3-idna python3-jinja2 python3-jsonschema python3-jsonschema-specifications python3-jupyter-core python3-lib2to3 python3-markupsafe python3-minimal python3-nbformat python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pathspec python3-pkg-resources python3-platformdirs python3-plotly python3-pluggy python3-pysam python3-referencing python3-requests python3-rpds-py python3-scipy python3-setuptools python3-setuptools-scm python3-six python3-tenacity python3-tqdm python3-traitlets python3-trove-classifiers python3-typing-extensions python3-tz python3-urllib3 python3.11 python3.11-minimal python3.12 python3.12-minimal readline-common 0 upgraded, 96 newly installed, 0 to remove and 0 not upgraded. Need to get 68.8 MB of archives. After this operation, 381 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libpython3.11-minimal amd64 3.11.8-1 [817 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.6.0-1 [101 kB] Get:3 http://deb.debian.org/debian sid/main amd64 python3.11-minimal amd64 3.11.8-1 [2037 kB] Get:4 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.11.6-1 [26.2 kB] Get:5 http://deb.debian.org/debian sid/main amd64 media-types all 10.1.0 [26.9 kB] Get:6 http://deb.debian.org/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.4+20240113-1 [135 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.20.1-5+b1 [33.2 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.20.1-5+b1 [80.0 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:11 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.20.1-5+b1 [333 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.20.1-5+b1 [135 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libtirpc-common all 1.3.4+ds-1 [10.7 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libtirpc3 amd64 1.3.4+ds-1 [82.1 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libnsl2 amd64 1.3.0-3 [40.0 kB] Get:16 http://deb.debian.org/debian sid/main amd64 readline-common all 8.2-3 [69.1 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libreadline8 amd64 8.2-3 [167 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.45.1-1 [894 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libpython3.11-stdlib amd64 3.11.8-1 [1825 kB] Get:20 http://deb.debian.org/debian sid/main amd64 python3.11 amd64 3.11.8-1 [597 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.11.6-1 [9224 B] Get:22 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.11.6-1 [26.2 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libpython3.12-minimal amd64 3.12.2-1 [807 kB] Get:24 http://deb.debian.org/debian sid/main amd64 python3.12-minimal amd64 3.12.2-1 [2186 kB] Get:25 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.1.5-1 [1241 kB] Get:26 http://deb.debian.org/debian sid/main amd64 ca-certificates all 20240203 [158 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libaec0 amd64 1.1.2-1 [23.4 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get:30 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-4+b1 [19.7 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-4+b1 [57.0 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5+b3 [184 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.59.0-1 [74.3 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libpsl5 amd64 0.21.2-1+b1 [59.1 kB] Get:35 http://deb.debian.org/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libssh2-1 amd64 1.11.0-4 [215 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libcurl3-gnutls amd64 8.6.0-3 [421 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libcurl4 amd64 8.6.0-3 [430 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libdeflate0 amd64 1.19-1 [41.4 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14-20240201-3 [836 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libsz2 amd64 1.1.2-1 [7684 B] Get:42 http://deb.debian.org/debian sid/main amd64 libhdf5-103-1 amd64 1.10.10+repack-3+b1 [1243 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-100 amd64 1.10.10+repack-3+b1 [63.3 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libhtscodecs2 amd64 1.6.0-1+b1 [93.0 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libhts3 amd64 1.19+ds-1 [447 kB] Get:46 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get:47 http://deb.debian.org/debian sid/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b1 [29.1 kB] Get:48 http://deb.debian.org/debian sid/main amd64 liblzf1 amd64 3.6-4 [10.1 kB] Get:49 http://deb.debian.org/debian sid/main amd64 libpython3.12-stdlib amd64 3.12.2-1 [1929 kB] Get:50 http://deb.debian.org/debian sid/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get:51 http://deb.debian.org/debian sid/main amd64 python3.12 amd64 3.12.2-1 [653 kB] Get:52 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:1.24.2-2 [6299 kB] Get:53 http://deb.debian.org/debian sid/main amd64 python3-h5py-serial amd64 3.10.0-1 [1399 kB] Get:54 http://deb.debian.org/debian sid/main amd64 python3-markupsafe amd64 2.1.5-1 [14.5 kB] Get:55 http://deb.debian.org/debian sid/main amd64 python3-jinja2 all 3.1.2-1 [119 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2.31.0+dfsg-1 [68.6 kB] Get:67 http://deb.debian.org/debian sid/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get:68 http://deb.debian.org/debian sid/main amd64 python3-fastjsonschema all 2.19.0-1 [21.2 kB] Get:69 http://deb.debian.org/debian sid/main amd64 python3-attr all 23.2.0-1 [65.5 kB] Get:70 http://deb.debian.org/debian sid/main amd64 python3-editables all 0.5-1 [14.8 kB] Get:71 http://deb.debian.org/debian sid/main amd64 python3-packaging all 23.2-1 [44.8 kB] Get:72 http://deb.debian.org/debian sid/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get:73 http://deb.debian.org/debian sid/main amd64 python3-pluggy all 1.4.0-1 [26.2 kB] Get:74 http://deb.debian.org/debian sid/main amd64 python3-trove-classifiers all 2024.1.31-1 [9968 B] Get:75 http://deb.debian.org/debian sid/main amd64 python3-hatchling all 1.21.0-1 [48.4 kB] Get:76 http://deb.debian.org/debian sid/main amd64 python3-lib2to3 all 3.11.5-1 [77.5 kB] Get:77 http://deb.debian.org/debian sid/main amd64 python3-distutils all 3.11.5-1 [131 kB] Get:78 http://deb.debian.org/debian sid/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get:79 http://deb.debian.org/debian sid/main amd64 python3-typing-extensions all 4.9.0-1 [63.9 kB] Get:80 http://deb.debian.org/debian sid/main amd64 python3-setuptools-scm all 8.0.4-2 [39.5 kB] Get:81 http://deb.debian.org/debian sid/main amd64 python3-hatch-vcs all 0.4.0-1 [8336 B] Get:82 http://deb.debian.org/debian sid/main amd64 python3-rpds-py amd64 0.12.0-3 [276 kB] Get:83 http://deb.debian.org/debian sid/main amd64 python3-referencing all 0.31.0-1 [22.2 kB] Get:84 http://deb.debian.org/debian sid/main amd64 python3-jsonschema-specifications all 2023.11.1-2 [8448 B] Get:85 http://deb.debian.org/debian sid/main amd64 python3-jsonschema all 4.19.2-2 [71.2 kB] Get:86 http://deb.debian.org/debian sid/main amd64 python3-platformdirs all 4.2.0-1 [15.9 kB] Get:87 http://deb.debian.org/debian sid/main amd64 python3-traitlets all 5.5.0-2 [90.7 kB] Get:88 http://deb.debian.org/debian sid/main amd64 python3-jupyter-core all 5.3.2-1 [31.5 kB] Get:89 http://deb.debian.org/debian sid/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB] Get:90 http://deb.debian.org/debian sid/main amd64 python3-tenacity all 8.2.3-2 [43.8 kB] Get:91 http://deb.debian.org/debian sid/main amd64 python3-plotly all 5.15.0+dfsg1-1 [2213 kB] Get:92 http://deb.debian.org/debian sid/main amd64 python3-pysam amd64 0.22.0+ds-1+b1 [4110 kB] Get:93 http://deb.debian.org/debian sid/main amd64 python3-scipy amd64 1.11.4-5 [19.5 MB] Get:94 http://deb.debian.org/debian sid/main amd64 python3-tqdm all 4.64.1-2 [93.7 kB] Get:95 http://deb.debian.org/debian sid/main amd64 python3-h5py all 3.10.0-1 [14.4 kB] Get:96 http://deb.debian.org/debian sid/main amd64 pycoqc all 2.5.2+dfsg-3 [36.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 68.8 MB in 1s (96.2 MB/s) Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5226 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.8-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.8-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.8-1_amd64.deb ... Unpacking python3.11-minimal (3.11.8-1) ... Setting up libpython3.11-minimal:amd64 (3.11.8-1) ... Setting up libexpat1:amd64 (2.6.0-1) ... Setting up python3.11-minimal (3.11.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5542 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.11.6-1_amd64.deb ... 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(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6079 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.6-1_amd64.deb ... Unpacking python3 (3.11.6-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../01-libpython3.12-minimal_3.12.2-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.2-1) ... Selecting previously unselected package python3.12-minimal. 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Preparing to unpack .../08-libsasl2-modules-db_2.1.28+dfsg1-4+b1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../09-libsasl2-2_2.1.28+dfsg1-4+b1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../10-libldap-2.5-0_2.5.13+dfsg-5+b3_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../11-libnghttp2-14_1.59.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.59.0-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../12-libpsl5_0.21.2-1+b1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.2-1+b1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../13-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../14-libssh2-1_1.11.0-4_amd64.deb ... Unpacking libssh2-1:amd64 (1.11.0-4) ... Selecting previously unselected package libcurl3-gnutls:amd64. Preparing to unpack .../15-libcurl3-gnutls_8.6.0-3_amd64.deb ... Unpacking libcurl3-gnutls:amd64 (8.6.0-3) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../16-libcurl4_8.6.0-3_amd64.deb ... Unpacking libcurl4:amd64 (8.6.0-3) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../17-libdeflate0_1.19-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.19-1) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../18-libgfortran5_14-20240201-3_amd64.deb ... Unpacking libgfortran5:amd64 (14-20240201-3) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../19-libsz2_1.1.2-1_amd64.deb ... Unpacking libsz2:amd64 (1.1.2-1) ... Selecting previously unselected package libhdf5-103-1:amd64. Preparing to unpack .../20-libhdf5-103-1_1.10.10+repack-3+b1_amd64.deb ... Unpacking libhdf5-103-1:amd64 (1.10.10+repack-3+b1) ... Selecting previously unselected package libhdf5-hl-100:amd64. Preparing to unpack .../21-libhdf5-hl-100_1.10.10+repack-3+b1_amd64.deb ... Unpacking libhdf5-hl-100:amd64 (1.10.10+repack-3+b1) ... Selecting previously unselected package libhtscodecs2:amd64. Preparing to unpack .../22-libhtscodecs2_1.6.0-1+b1_amd64.deb ... Unpacking libhtscodecs2:amd64 (1.6.0-1+b1) ... Selecting previously unselected package libhts3:amd64. Preparing to unpack .../23-libhts3_1.19+ds-1_amd64.deb ... Unpacking libhts3:amd64 (1.19+ds-1) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../24-liblapack3_3.12.0-3_amd64.deb ... Unpacking liblapack3:amd64 (3.12.0-3) ... Selecting previously unselected package liblbfgsb0:amd64. 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Selecting previously unselected package python3-pandas-lib:amd64. Preparing to unpack .../37-python3-pandas-lib_2.1.4+dfsg-5_amd64.deb ... Unpacking python3-pandas-lib:amd64 (2.1.4+dfsg-5) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../38-python3-pandas_2.1.4+dfsg-5_all.deb ... Unpacking python3-pandas (2.1.4+dfsg-5) ... Selecting previously unselected package python3-certifi. Preparing to unpack .../39-python3-certifi_2023.11.17-1_all.deb ... Unpacking python3-certifi (2023.11.17-1) ... Selecting previously unselected package python3-charset-normalizer. Preparing to unpack .../40-python3-charset-normalizer_3.3.2-1_all.deb ... Unpacking python3-charset-normalizer (3.3.2-1) ... Selecting previously unselected package python3-idna. Preparing to unpack .../41-python3-idna_3.6-2_all.deb ... Unpacking python3-idna (3.6-2) ... Selecting previously unselected package python3-urllib3. Preparing to unpack .../42-python3-urllib3_1.26.18-2_all.deb ... 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Selecting previously unselected package python3-lib2to3. Preparing to unpack .../54-python3-lib2to3_3.11.5-1_all.deb ... Unpacking python3-lib2to3 (3.11.5-1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../55-python3-distutils_3.11.5-1_all.deb ... Unpacking python3-distutils (3.11.5-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../56-python3-setuptools_68.1.2-2_all.deb ... Unpacking python3-setuptools (68.1.2-2) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../57-python3-typing-extensions_4.9.0-1_all.deb ... Unpacking python3-typing-extensions (4.9.0-1) ... Selecting previously unselected package python3-setuptools-scm. Preparing to unpack .../58-python3-setuptools-scm_8.0.4-2_all.deb ... Unpacking python3-setuptools-scm (8.0.4-2) ... Selecting previously unselected package python3-hatch-vcs. Preparing to unpack .../59-python3-hatch-vcs_0.4.0-1_all.deb ... Unpacking python3-hatch-vcs (0.4.0-1) ... Selecting previously unselected package python3-rpds-py. Preparing to unpack .../60-python3-rpds-py_0.12.0-3_amd64.deb ... Unpacking python3-rpds-py (0.12.0-3) ... Selecting previously unselected package python3-referencing. Preparing to unpack .../61-python3-referencing_0.31.0-1_all.deb ... Unpacking python3-referencing (0.31.0-1) ... Selecting previously unselected package python3-jsonschema-specifications. Preparing to unpack .../62-python3-jsonschema-specifications_2023.11.1-2_all.deb ... Unpacking python3-jsonschema-specifications (2023.11.1-2) ... Selecting previously unselected package python3-jsonschema. Preparing to unpack .../63-python3-jsonschema_4.19.2-2_all.deb ... Unpacking python3-jsonschema (4.19.2-2) ... Selecting previously unselected package python3-platformdirs. Preparing to unpack .../64-python3-platformdirs_4.2.0-1_all.deb ... Unpacking python3-platformdirs (4.2.0-1) ... Selecting previously unselected package python3-traitlets. Preparing to unpack .../65-python3-traitlets_5.5.0-2_all.deb ... Unpacking python3-traitlets (5.5.0-2) ... Selecting previously unselected package python3-jupyter-core. Preparing to unpack .../66-python3-jupyter-core_5.3.2-1_all.deb ... Unpacking python3-jupyter-core (5.3.2-1) ... Selecting previously unselected package python3-nbformat. Preparing to unpack .../67-python3-nbformat_5.9.1-1_all.deb ... Unpacking python3-nbformat (5.9.1-1) ... Selecting previously unselected package python3-tenacity. Preparing to unpack .../68-python3-tenacity_8.2.3-2_all.deb ... Unpacking python3-tenacity (8.2.3-2) ... Selecting previously unselected package python3-plotly. Preparing to unpack .../69-python3-plotly_5.15.0+dfsg1-1_all.deb ... Unpacking python3-plotly (5.15.0+dfsg1-1) ... Selecting previously unselected package python3-pysam. Preparing to unpack .../70-python3-pysam_0.22.0+ds-1+b1_amd64.deb ... Unpacking python3-pysam (0.22.0+ds-1+b1) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../71-python3-scipy_1.11.4-5_amd64.deb ... Unpacking python3-scipy (1.11.4-5) ... Selecting previously unselected package python3-tqdm. Preparing to unpack .../72-python3-tqdm_4.64.1-2_all.deb ... Unpacking python3-tqdm (4.64.1-2) ... Selecting previously unselected package python3-h5py. Preparing to unpack .../73-python3-h5py_3.10.0-1_all.deb ... Unpacking python3-h5py (3.10.0-1) ... Selecting previously unselected package pycoqc. Preparing to unpack .../74-pycoqc_2.5.2+dfsg-3_all.deb ... Unpacking pycoqc (2.5.2+dfsg-3) ... Setting up libhtscodecs2:amd64 (1.6.0-1+b1) ... Setting up media-types (10.1.0) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libpsl5:amd64 (0.21.2-1+b1) ... Setting up libtirpc-common (1.3.4+ds-1) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libsqlite3-0:amd64 (3.45.1-1) ... Setting up libpython3.12-minimal:amd64 (3.12.2-1) ... Setting up libnghttp2-14:amd64 (1.59.0-1) ... Setting up libdeflate0:amd64 (1.19-1) ... Setting up libaec0:amd64 (1.1.2-1) ... Setting up libkrb5support0:amd64 (1.20.1-5+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up liblzf1:amd64 (3.6-4) ... Setting up libncursesw6:amd64 (6.4+20240113-1) ... Setting up libk5crypto3:amd64 (1.20.1-5+b1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Setting up libgfortran5:amd64 (14-20240201-3) ... Setting up libssh2-1:amd64 (1.11.0-4) ... Setting up netbase (6.4) ... Setting up libkrb5-3:amd64 (1.20.1-5+b1) ... Setting up openssl (3.1.5-1) ... Setting up readline-common (8.2-3) ... Setting up libsz2:amd64 (1.1.2-1) ... Setting up python3.12-minimal (3.12.2-1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libreadline8:amd64 (8.2-3) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... Setting up libcurl4:amd64 (8.6.0-3) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Setting up libtirpc3:amd64 (1.3.4+ds-1) ... Setting up libcurl3-gnutls:amd64 (8.6.0-3) ... Setting up libhdf5-103-1:amd64 (1.10.10+repack-3+b1) ... Setting up libnsl2:amd64 (1.3.0-3) ... Setting up libhdf5-hl-100:amd64 (1.10.10+repack-3+b1) ... Setting up libhts3:amd64 (1.19+ds-1) ... Setting up libpython3.12-stdlib:amd64 (3.12.2-1) ... Setting up libpython3.11-stdlib:amd64 (3.11.8-1) ... Setting up python3.12 (3.12.2-1) ... Setting up libpython3-stdlib:amd64 (3.11.6-1) ... Setting up python3.11 (3.11.8-1) ... Setting up python3 (3.11.6-1) ... Setting up python3-editables (0.5-1) ... Setting up python3-markupsafe (2.1.5-1) ... Setting up python3-platformdirs (4.2.0-1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-4) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.2-1) ... Setting up python3-packaging (23.2-1) ... Setting up python3-certifi (2023.11.17-1) ... Setting up python3-idna (3.6-2) ... Setting up python3-typing-extensions (4.9.0-1) ... Setting up python3-urllib3 (1.26.18-2) ... Setting up python3-pluggy (1.4.0-1) ... Setting up python3-rpds-py (0.12.0-3) ... Setting up python3-fastjsonschema (2.19.0-1) ... Setting up python3-trove-classifiers (2024.1.31-1) ... Setting up python3-traitlets (5.5.0-2) ... Setting up python3-dateutil (2.8.2-3) ... Setting up python3-pathspec (0.12.1-1) ... Setting up python3-lib2to3 (3.11.5-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.11.5-1) ... python3.12: can't get files for byte-compilation Setting up python3-attr (23.2.0-1) ... Setting up python3-pysam (0.22.0+ds-1+b1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-charset-normalizer (3.3.2-1) ... Setting up python3-tenacity (8.2.3-2) ... Setting up python3-tqdm (4.64.1-2) ... Setting up python3-setuptools-scm (8.0.4-2) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.31.0+dfsg-1) ... Setting up python3-numpy (1:1.24.2-2) ... Setting up python3-hatchling (1.21.0-1) ... Setting up python3-jupyter-core (5.3.2-1) ... Setting up python3-hatch-vcs (0.4.0-1) ... Setting up python3-referencing (0.31.0-1) ... Setting up python3-scipy (1.11.4-5) ... Setting up python3-pandas-lib:amd64 (2.1.4+dfsg-5) ... Setting up python3-h5py-serial (3.10.0-1) ... Setting up python3-pandas (2.1.4+dfsg-5) ... Setting up python3-h5py (3.10.0-1) ... Setting up python3-jsonschema-specifications (2023.11.1-2) ... Setting up python3-jsonschema (4.19.2-2) ... Setting up python3-nbformat (5.9.1-1) ... Setting up python3-plotly (5.15.0+dfsg1-1) ... Setting up pycoqc (2.5.2+dfsg-3) ... Processing triggers for libc-bin (2.37-15) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 1m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', '-y', 'install', 'pycoqc=2.5.2+dfsg-3'] 1m16.7s INFO: Running scripts post_install 1m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_install_exceptions'] 1m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_install_exceptions'] 1m16.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 1m18.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 1m24.1s ERROR: WARN: Broken symlinks: /usr/share/doc/python3-editables/CHANGELOG.md.gz -> changelog.gz (python3-editables) /usr/share/doc/python3.12/changelog.gz -> NEWS.gz (python3.12) /usr/share/doc/libhdf5-hl-100/RELEASE.txt.gz -> changelog.gz (libhdf5-hl-100:amd64) /usr/share/doc/libhdf5-103-1/RELEASE.txt.gz -> changelog.gz (libhdf5-103-1:amd64) /usr/share/doc/python3.11/python-policy.txt.gz -> ../python3/python-policy.txt.gz (python3) /usr/share/doc/python3.11/changelog.gz -> NEWS.gz (python3.11) 1m24.2s INFO: /bin converted to /usr/bin by /usr merge 1m24.2s INFO: /lib converted to /usr/lib by /usr merge 1m24.2s INFO: /lib/init converted to /usr/lib/init by /usr merge 1m24.2s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 1m24.2s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 1m24.2s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 1m24.2s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 1m24.2s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 1m24.2s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 1m24.2s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 1m24.2s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 1m24.2s INFO: /lib64 converted to /usr/lib64 by /usr merge 1m24.2s INFO: /sbin converted to /usr/sbin by /usr merge 1m26.0s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', '-ac', '--ignore-obsolete'] 1m28.6s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', '-ac', '--ignore-obsolete'] 1m28.6s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m28.7s DUMP: 0.15.6 1m28.7s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m28.7s INFO: Running adequate version 0.15.6 now. 1m28.7s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'pycoqc'] 1m28.8s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'pycoqc'] 1m28.8s INFO: Running scripts pre_remove 1m28.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m28.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m28.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m28.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m28.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m31.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m31.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_exceptions'] 1m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/pre_remove_exceptions'] 1m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m32.0s DUMP: install ok installed apt apt 2.7.12 install ok installed base-files base-files 13 install ok installed base-passwd base-passwd 3.6.3 install ok installed bash bash 5.2.21-2 install ok installed bsdutils bsdutils 1:2.39.3-6 install ok installed ca-certificates ca-certificates 20240203 install ok installed coreutils coreutils 9.4-3+b1 install ok installed dash dash 0.5.12-6 install ok installed debconf debconf 1.5.86 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.16 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.4 install ok installed e2fsprogs e2fsprogs 1.47.0-2+b1 install ok installed findutils findutils 4.9.0-5 install ok installed gcc-14-base:amd64 gcc-14-base 14-20240201-3 install ok installed gpgv gpgv 2.2.40-1.1+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-1 install ok installed libaec0:amd64 libaec0 1.1.2-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.7.12 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-2 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-2 install ok installed libblas3:amd64 libblas3 3.12.0-3 install ok installed libblkid1:amd64 libblkid1 2.39.3-6 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b2 install ok installed libc-bin libc-bin 2.37-15 install ok installed libc6:amd64 libc6 2.37-15 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.4-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libcurl3-gnutls:amd64 libcurl3-gnutls 8.6.0-3 install ok installed libcurl4:amd64 libcurl4 8.6.0-3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-4+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.271+b1 install ok installed libdeflate0:amd64 libdeflate0 1.19-1 install ok installed libexpat1:amd64 libexpat1 2.6.0-1 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14-20240201-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.3-2 install ok installed libgfortran5:amd64 libgfortran5 14-20240201-3 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30:amd64 libgnutls30 3.8.3-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.47-3 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.20.1-5+b1 install ok installed libhdf5-103-1:amd64 libhdf5-103-1 1.10.10+repack-3+b1 install ok installed libhdf5-hl-100:amd64 libhdf5-hl-100 1.10.10+repack-3+b1 install ok installed libhogweed6:amd64 libhogweed6 3.9.1-2+b1 install ok installed libhts3:amd64 libhts3 1.19+ds-1 install ok installed libhtscodecs2:amd64 libhtscodecs2 1.6.0-1+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libk5crypto3:amd64 libk5crypto3 1.20.1-5+b1 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-3 install ok installed libkrb5-3:amd64 libkrb5-3 1.20.1-5+b1 install ok installed libkrb5support0:amd64 libkrb5support0 1.20.1-5+b1 install ok installed liblapack3:amd64 liblapack3 3.12.0-3 install ok installed liblbfgsb0:amd64 liblbfgsb0 3.0+dfsg.4-1+b1 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.13+dfsg-5+b3 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1+b2 install ok installed liblzf1:amd64 liblzf1 3.6-4 install ok installed liblzma5:amd64 liblzma5 5.4.5-0.3 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.39.3-6 install ok installed libncursesw6:amd64 libncursesw6 6.4+20240113-1 install ok installed libnettle8:amd64 libnettle8 3.9.1-2+b1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.59.0-1 install ok installed libnsl2:amd64 libnsl2 1.3.0-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.3-4 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-9.1+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-9.1+b1 install ok installed libpam-runtime libpam-runtime 1.5.2-9.1 install ok installed libpam0g:amd64 libpam0g 1.5.2-9.1+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4 install ok installed libpsl5:amd64 libpsl5 0.21.2-1+b1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.11.6-1 install ok installed libpython3.11-minimal:amd64 libpython3.11-minimal 3.11.8-1 install ok installed libpython3.11-stdlib:amd64 libpython3.11-stdlib 3.11.8-1 install ok installed libpython3.12-minimal:amd64 libpython3.12-minimal 3.12.2-1 install ok installed libpython3.12-stdlib:amd64 libpython3.12-stdlib 3.12.2-1 install ok installed libreadline8:amd64 libreadline8 8.2-3 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-4+b1 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1 install ok installed libselinux1:amd64 libselinux1 3.5-2 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b2 install ok installed libsepol2:amd64 libsepol2 3.5-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.39.3-6 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.45.1-1 install ok installed libss2:amd64 libss2 1.47.0-2+b1 install ok installed libssh2-1:amd64 libssh2-1 1.11.0-4 install ok installed libssl3:amd64 libssl3 3.1.5-1 install ok installed libstdc++6:amd64 libstdc++6 14-20240201-3 install ok installed libsystemd0:amd64 libsystemd0 255.3-2 install ok installed libsz2:amd64 libsz2 1.1.2-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.4+20240113-1 install ok installed libtirpc-common libtirpc-common 1.3.4+ds-1 install ok installed libtirpc3:amd64 libtirpc3 1.3.4+ds-1 install ok installed libudev1:amd64 libudev1 255.3-2 install ok installed libunistring5:amd64 libunistring5 1.1-2 install ok installed libuuid1:amd64 libuuid1 2.39.3-6 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-2 install ok installed login login 1:4.13+dfsg1-4 install ok installed logsave logsave 1.47.0-2+b1 install ok installed mawk mawk 1.3.4.20240123-1 install ok installed media-types media-types 10.1.0 install ok installed mount mount 2.39.3-6 install ok installed ncurses-base ncurses-base 6.4+20240113-1 install ok installed ncurses-bin ncurses-bin 6.4+20240113-1 install ok installed netbase netbase 6.4 install ok installed openssl openssl 3.1.5-1 install ok installed passwd passwd 1:4.13+dfsg1-4 install ok installed perl-base perl-base 5.38.2-3 install ok installed pycoqc pycoqc 2.5.2+dfsg-3 install ok installed python3 python3 3.11.6-1 install ok installed python3-attr python3-attr 23.2.0-1 install ok installed python3-certifi python3-certifi 2023.11.17-1 install ok installed python3-chardet python3-chardet 5.2.0+dfsg-1 install ok installed python3-charset-normalizer python3-charset-normalizer 3.3.2-1 install ok installed python3-dateutil python3-dateutil 2.8.2-3 install ok installed python3-decorator python3-decorator 5.1.1-5 install ok installed python3-distutils python3-distutils 3.11.5-1 install ok installed python3-editables python3-editables 0.5-1 install ok installed python3-fastjsonschema python3-fastjsonschema 2.19.0-1 install ok installed python3-h5py python3-h5py 3.10.0-1 install ok installed python3-h5py-serial python3-h5py-serial 3.10.0-1 install ok installed python3-hatch-vcs python3-hatch-vcs 0.4.0-1 install ok installed python3-hatchling python3-hatchling 1.21.0-1 install ok installed python3-idna python3-idna 3.6-2 install ok installed python3-jinja2 python3-jinja2 3.1.2-1 install ok installed python3-jsonschema python3-jsonschema 4.19.2-2 install ok installed python3-jsonschema-specifications python3-jsonschema-specifications 2023.11.1-2 install ok installed python3-jupyter-core python3-jupyter-core 5.3.2-1 install ok installed python3-lib2to3 python3-lib2to3 3.11.5-1 install ok installed python3-markupsafe python3-markupsafe 2.1.5-1 install ok installed python3-minimal python3-minimal 3.11.6-1 install ok installed python3-nbformat python3-nbformat 5.9.1-1 install ok installed python3-numpy python3-numpy 1:1.24.2-2 install ok installed python3-packaging python3-packaging 23.2-1 install ok installed python3-pandas python3-pandas 2.1.4+dfsg-5 install ok installed python3-pandas-lib:amd64 python3-pandas-lib 2.1.4+dfsg-5 install ok installed python3-pathspec python3-pathspec 0.12.1-1 install ok installed python3-pkg-resources python3-pkg-resources 68.1.2-2 install ok installed python3-platformdirs python3-platformdirs 4.2.0-1 install ok installed python3-plotly python3-plotly 5.15.0+dfsg1-1 install ok installed python3-pluggy python3-pluggy 1.4.0-1 install ok installed python3-pysam python3-pysam 0.22.0+ds-1+b1 install ok installed python3-referencing python3-referencing 0.31.0-1 install ok installed python3-requests python3-requests 2.31.0+dfsg-1 install ok installed python3-rpds-py python3-rpds-py 0.12.0-3 install ok installed python3-scipy python3-scipy 1.11.4-5 install ok installed python3-setuptools python3-setuptools 68.1.2-2 install ok installed python3-setuptools-scm python3-setuptools-scm 8.0.4-2 install ok installed python3-six python3-six 1.16.0-4 install ok installed python3-tenacity python3-tenacity 8.2.3-2 install ok installed python3-tqdm python3-tqdm 4.64.1-2 install ok installed python3-traitlets python3-traitlets 5.5.0-2 install ok installed python3-trove-classifiers python3-trove-classifiers 2024.1.31-1 install ok installed python3-typing-extensions python3-typing-extensions 4.9.0-1 install ok installed python3-tz python3-tz 2024.1-2 install ok installed python3-urllib3 python3-urllib3 1.26.18-2 install ok installed python3.11 python3.11 3.11.8-1 install ok installed python3.11-minimal python3.11-minimal 3.11.8-1 install ok installed python3.12 python3.12 3.12.2-1 install ok installed python3.12-minimal python3.12-minimal 3.12.2-1 install ok installed readline-common readline-common 8.2-3 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.08-6 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.39.3-6 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg-3+b1 1m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', 'remove', 'ca-certificates', 'libaec0:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libhts3:amd64', 'libhtscodecs2:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libldap-2.5-0:amd64', 'liblzf1:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'media-types', 'netbase', 'openssl', 'python3', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-dateutil', 'python3-decorator', 'python3-distutils', 'python3-editables', 'python3-fastjsonschema', 'python3-h5py', 'python3-h5py-serial', 'python3-hatch-vcs', 'python3-hatchling', 'python3-idna', 'python3-jinja2', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-lib2to3', 'python3-markupsafe', 'python3-minimal', 'python3-nbformat', 'python3-numpy', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pathspec', 'python3-pkg-resources', 'python3-platformdirs', 'python3-plotly', 'python3-pluggy', 'python3-pysam', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-scipy', 'python3-setuptools', 'python3-setuptools-scm', 'python3-six', 'python3-tenacity', 'python3-tqdm', 'python3-traitlets', 'python3-trove-classifiers', 'python3-typing-extensions', 'python3-tz', 'python3-urllib3', 'python3.11', 'python3.11-minimal', 'python3.12', 'python3.12-minimal', 'readline-common', 'pycoqc'] 1m43.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: ca-certificates libaec0 libblas3 libbrotli1 libcurl3-gnutls libcurl4 libdeflate0 libexpat1 libgfortran5 libgssapi-krb5-2 libhdf5-103-1 libhdf5-hl-100 libhts3 libhtscodecs2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 libldap-2.5-0 liblzf1 libncursesw6 libnghttp2-14 libnsl2 libpsl5 libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib libpython3.12-minimal libpython3.12-stdlib libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libsz2 libtirpc-common libtirpc3 media-types netbase openssl pycoqc python3 python3-attr python3-certifi python3-chardet python3-charset-normalizer python3-dateutil python3-decorator python3-distutils python3-editables python3-fastjsonschema python3-h5py python3-h5py-serial python3-hatch-vcs python3-hatchling python3-idna python3-jinja2 python3-jsonschema python3-jsonschema-specifications python3-jupyter-core python3-lib2to3 python3-markupsafe python3-minimal python3-nbformat python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pathspec python3-pkg-resources python3-platformdirs python3-plotly python3-pluggy python3-pysam python3-referencing python3-requests python3-rpds-py python3-scipy python3-setuptools python3-setuptools-scm python3-six python3-tenacity python3-tqdm python3-traitlets python3-trove-classifiers python3-typing-extensions python3-tz python3-urllib3 python3.11 python3.11-minimal python3.12 python3.12-minimal readline-common 0 upgraded, 0 newly installed, 96 to remove and 0 not upgraded. After this operation, 381 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27444 files and directories currently installed.) Removing pycoqc (2.5.2+dfsg-3) ... Removing python3-plotly (5.15.0+dfsg1-1) ... Removing python3-requests (2.31.0+dfsg-1) ... Removing python3-certifi (2023.11.17-1) ... Removing ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing python3-h5py (3.10.0-1) ... Removing python3-h5py-serial (3.10.0-1) ... Removing libhdf5-hl-100:amd64 (1.10.10+repack-3+b1) ... Removing libhdf5-103-1:amd64 (1.10.10+repack-3+b1) ... Removing libsz2:amd64 (1.1.2-1) ... Removing libaec0:amd64 (1.1.2-1) ... Removing python3-scipy (1.11.4-5) ... Removing python3-pandas (2.1.4+dfsg-5) ... Removing python3-pandas-lib:amd64 (2.1.4+dfsg-5) ... Removing python3-numpy (1:1.24.2-2) ... Removing liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Removing liblapack3:amd64 (3.12.0-3) ... Removing libblas3:amd64 (3.12.0-3) ... Removing libcurl4:amd64 (8.6.0-3) ... Removing python3-pysam (0.22.0+ds-1+b1) ... Removing libhts3:amd64 (1.19+ds-1) ... Removing libcurl3-gnutls:amd64 (8.6.0-3) ... Removing libbrotli1:amd64 (1.1.0-2+b3) ... Removing libdeflate0:amd64 (1.19-1) ... Removing python3.12 (3.12.2-1) ... Removing python3.12-minimal (3.12.2-1) ... Removing python3-nbformat (5.9.1-1) ... Removing python3-jsonschema (4.19.2-2) ... Removing python3-jsonschema-specifications (2023.11.1-2) ... Removing python3-referencing (0.31.0-1) ... Removing python3-rpds-py (0.12.0-3) ... Removing python3-hatch-vcs (0.4.0-1) ... Removing python3-setuptools-scm (8.0.4-2) ... Removing python3-setuptools (68.1.2-2) ... Removing python3-tqdm (4.64.1-2) ... Removing libgfortran5:amd64 (14-20240201-3) ... Removing libpython3.12-stdlib:amd64 (3.12.2-1) ... Removing libhtscodecs2:amd64 (1.6.0-1+b1) ... Removing libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Removing liblzf1:amd64 (3.6-4) ... Removing libnghttp2-14:amd64 (1.59.0-1) ... Removing libpsl5:amd64 (0.21.2-1+b1) ... Removing libpython3.12-minimal:amd64 (3.12.2-1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Removing libssh2-1:amd64 (1.11.0-4) ... Removing openssl (3.1.5-1) ... Removing python3-attr (23.2.0-1) ... Removing python3-chardet (5.2.0+dfsg-1) ... Removing python3-charset-normalizer (3.3.2-1) ... Removing python3-dateutil (2.8.2-3) ... Removing python3-decorator (5.1.1-5) ... Removing python3-hatchling (1.21.0-1) ... Removing python3-editables (0.5-1) ... Removing python3-fastjsonschema (2.19.0-1) ... Removing python3-idna (3.6-2) ... Removing python3-jinja2 (3.1.2-1) ... Removing python3-jupyter-core (5.3.2-1) ... Removing python3-markupsafe (2.1.5-1) ... Removing python3-packaging (23.2-1) ... Removing python3-pathspec (0.12.1-1) ... Removing python3-pkg-resources (68.1.2-2) ... Removing python3-platformdirs (4.2.0-1) ... Removing python3-pluggy (1.4.0-1) ... Removing python3-urllib3 (1.26.18-2) ... Removing python3-six (1.16.0-4) ... Removing python3-tenacity (8.2.3-2) ... Removing python3-traitlets (5.5.0-2) ... Removing python3-trove-classifiers (2024.1.31-1) ... Removing python3-typing-extensions (4.9.0-1) ... Removing python3-tz (2024.1-2) ... Removing python3-distutils (3.11.5-1) ... Removing python3-lib2to3 (3.11.5-1) ... Removing python3 (3.11.6-1) ... Removing python3.11 (3.11.8-1) ... Removing libpython3-stdlib:amd64 (3.11.6-1) ... Removing libpython3.11-stdlib:amd64 (3.11.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libncursesw6:amd64 (6.4+20240113-1) ... Removing libnsl2:amd64 (1.3.0-3) ... Removing python3-minimal (3.11.6-1) ... Removing libreadline8:amd64 (8.2-3) ... Removing libsqlite3-0:amd64 (3.45.1-1) ... Removing media-types (10.1.0) ... Removing netbase (6.4) ... Removing readline-common (8.2-3) ... Removing python3.11-minimal (3.11.8-1) ... Removing libexpat1:amd64 (2.6.0-1) ... Removing libtirpc3:amd64 (1.3.4+ds-1) ... Removing libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... Removing libkrb5-3:amd64 (1.20.1-5+b1) ... Removing libk5crypto3:amd64 (1.20.1-5+b1) ... Removing libkeyutils1:amd64 (1.6.3-3) ... Removing libkrb5support0:amd64 (1.20.1-5+b1) ... Removing libpython3.11-minimal:amd64 (3.11.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libtirpc-common (1.3.4+ds-1) ... Processing triggers for libc-bin (2.37-15) ... 1m43.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', 'remove', 'ca-certificates', 'libaec0:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libhts3:amd64', 'libhtscodecs2:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libldap-2.5-0:amd64', 'liblzf1:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'media-types', 'netbase', 'openssl', 'python3', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-dateutil', 'python3-decorator', 'python3-distutils', 'python3-editables', 'python3-fastjsonschema', 'python3-h5py', 'python3-h5py-serial', 'python3-hatch-vcs', 'python3-hatchling', 'python3-idna', 'python3-jinja2', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-lib2to3', 'python3-markupsafe', 'python3-minimal', 'python3-nbformat', 'python3-numpy', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pathspec', 'python3-pkg-resources', 'python3-platformdirs', 'python3-plotly', 'python3-pluggy', 'python3-pysam', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-scipy', 'python3-setuptools', 'python3-setuptools-scm', 'python3-six', 'python3-tenacity', 'python3-tqdm', 'python3-traitlets', 'python3-trove-classifiers', 'python3-typing-extensions', 'python3-tz', 'python3-urllib3', 'python3.11', 'python3.11-minimal', 'python3.12', 'python3.12-minimal', 'readline-common', 'pycoqc'] 1m43.2s INFO: Running scripts post_remove 1m43.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_remove_exceptions'] 1m43.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_remove_exceptions'] 1m43.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg', '--purge', 'ca-certificates', 'libaec0:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libhts3:amd64', 'libhtscodecs2:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libldap-2.5-0:amd64', 'liblzf1:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'media-types', 'netbase', 'openssl', 'python3', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-dateutil', 'python3-decorator', 'python3-distutils', 'python3-editables', 'python3-fastjsonschema', 'python3-h5py', 'python3-h5py-serial', 'python3-hatch-vcs', 'python3-hatchling', 'python3-idna', 'python3-jinja2', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-lib2to3', 'python3-markupsafe', 'python3-minimal', 'python3-nbformat', 'python3-numpy', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pathspec', 'python3-pkg-resources', 'python3-platformdirs', 'python3-plotly', 'python3-pluggy', 'python3-pysam', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-scipy', 'python3-setuptools', 'python3-setuptools-scm', 'python3-six', 'python3-tenacity', 'python3-tqdm', 'python3-traitlets', 'python3-trove-classifiers', 'python3-typing-extensions', 'python3-tz', 'python3-urllib3', 'python3.11', 'python3.11-minimal', 'python3.12', 'python3.12-minimal', 'readline-common'] 1m43.5s DUMP: (Reading database ... 5239 files and directories currently installed.) Purging configuration files for ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libcurl3-gnutls which isn't installed dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... dpkg: warning: ignoring request to remove libhdf5-103-1 which isn't installed dpkg: warning: ignoring request to remove libhdf5-hl-100 which isn't installed dpkg: warning: ignoring request to remove libhts3 which isn't installed dpkg: warning: ignoring request to remove libhtscodecs2 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblbfgsb0 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove liblzf1 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnsl2 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed Purging configuration files for libpython3.11-minimal:amd64 (3.11.8-1) ... dpkg: warning: ignoring request to remove libpython3.11-stdlib which isn't installed Purging configuration files for libpython3.12-minimal:amd64 (3.12.2-1) ... dpkg: warning: ignoring request to remove libpython3.12-stdlib which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed Purging configuration files for libtirpc-common (1.3.4+ds-1) ... dpkg: warning: ignoring request to remove libtirpc3 which isn't installed Purging configuration files for media-types (10.1.0) ... Purging configuration files for netbase (6.4) ... Purging configuration files for openssl (3.1.5-1) ... Purging configuration files for python3 (3.11.6-1) ... dpkg: warning: ignoring request to remove python3-attr which isn't installed dpkg: warning: ignoring request to remove python3-certifi which isn't installed dpkg: warning: ignoring request to remove python3-chardet which isn't installed dpkg: warning: ignoring request to remove python3-charset-normalizer which isn't installed dpkg: warning: ignoring request to remove python3-dateutil which isn't installed dpkg: warning: ignoring request to remove python3-decorator which isn't installed dpkg: warning: ignoring request to remove python3-distutils which isn't installed dpkg: warning: ignoring request to remove python3-editables which isn't installed dpkg: warning: ignoring request to remove python3-fastjsonschema which isn't installed dpkg: warning: ignoring request to remove python3-h5py which isn't installed dpkg: warning: ignoring request to remove python3-h5py-serial which isn't installed dpkg: warning: ignoring request to remove python3-hatch-vcs which isn't installed dpkg: warning: ignoring request to remove python3-hatchling which isn't installed dpkg: warning: ignoring request to remove python3-idna which isn't installed dpkg: warning: ignoring request to remove python3-jinja2 which isn't installed Purging configuration files for python3-jsonschema (4.19.2-2) ... dpkg: warning: ignoring request to remove python3-jsonschema-specifications which isn't installed dpkg: warning: ignoring request to remove python3-jupyter-core which isn't installed dpkg: warning: ignoring request to remove python3-lib2to3 which isn't installed dpkg: warning: ignoring request to remove python3-markupsafe which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-nbformat which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-packaging which isn't installed dpkg: warning: ignoring request to remove python3-pandas which isn't installed dpkg: warning: ignoring request to remove python3-pandas-lib which isn't installed dpkg: warning: ignoring request to remove python3-pathspec which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-platformdirs which isn't installed dpkg: warning: ignoring request to remove python3-plotly which isn't installed dpkg: warning: ignoring request to remove python3-pluggy which isn't installed dpkg: warning: ignoring request to remove python3-pysam which isn't installed dpkg: warning: ignoring request to remove python3-referencing which isn't installed dpkg: warning: ignoring request to remove python3-requests which isn't installed dpkg: warning: ignoring request to remove python3-rpds-py which isn't installed dpkg: warning: ignoring request to remove python3-scipy which isn't installed dpkg: warning: ignoring request to remove python3-setuptools which isn't installed dpkg: warning: ignoring request to remove python3-setuptools-scm which isn't installed dpkg: warning: ignoring request to remove python3-six which isn't installed dpkg: warning: ignoring request to remove python3-tenacity which isn't installed dpkg: warning: ignoring request to remove python3-tqdm which isn't installed dpkg: warning: ignoring request to remove python3-traitlets which isn't installed dpkg: warning: ignoring request to remove python3-trove-classifiers which isn't installed dpkg: warning: ignoring request to remove python3-typing-extensions which isn't installed dpkg: warning: ignoring request to remove python3-tz which isn't installed dpkg: warning: ignoring request to remove python3-urllib3 which isn't installed dpkg: warning: ignoring request to remove python3.11 which isn't installed Purging configuration files for python3.11-minimal (3.11.8-1) ... dpkg: warning: ignoring request to remove python3.12 which isn't installed Purging configuration files for python3.12-minimal (3.12.2-1) ... Purging configuration files for readline-common (8.2-3) ... 1m43.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg', '--purge', 'ca-certificates', 'libaec0:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libhts3:amd64', 'libhtscodecs2:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libldap-2.5-0:amd64', 'liblzf1:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'media-types', 'netbase', 'openssl', 'python3', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-dateutil', 'python3-decorator', 'python3-distutils', 'python3-editables', 'python3-fastjsonschema', 'python3-h5py', 'python3-h5py-serial', 'python3-hatch-vcs', 'python3-hatchling', 'python3-idna', 'python3-jinja2', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-lib2to3', 'python3-markupsafe', 'python3-minimal', 'python3-nbformat', 'python3-numpy', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pathspec', 'python3-pkg-resources', 'python3-platformdirs', 'python3-plotly', 'python3-pluggy', 'python3-pysam', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-scipy', 'python3-setuptools', 'python3-setuptools-scm', 'python3-six', 'python3-tenacity', 'python3-tqdm', 'python3-traitlets', 'python3-trove-classifiers', 'python3-typing-extensions', 'python3-tz', 'python3-urllib3', 'python3.11', 'python3.11-minimal', 'python3.12', 'python3.12-minimal', 'readline-common'] 1m43.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg', '--purge', 'pycoqc'] 1m43.5s DUMP: dpkg: warning: ignoring request to remove pycoqc which isn't installed 1m43.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg', '--purge', 'pycoqc'] 1m43.5s INFO: Running scripts post_purge 1m43.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_purge_exceptions'] 1m43.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_purge_exceptions'] 1m43.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg', '--purge', '--pending'] 1m43.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg', '--purge', '--pending'] 1m43.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg', '--remove', '--pending'] 1m43.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg', '--remove', '--pending'] 1m43.5s INFO: Running scripts post_test 1m43.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_test_exceptions'] 1m43.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'tmp/scripts/post_test_exceptions'] 1m43.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 1m43.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 1m44.4s DEBUG: No broken symlinks as far as we can find. 1m44.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg-divert', '--list'] 1m44.4s DUMP: local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib 1m44.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'dpkg-divert', '--list'] 1m44.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', 'clean'] 1m44.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmf0796r5', 'apt-get', 'clean'] 1m44.4s DEBUG: Recording chroot state 1m45.0s INFO: PASS: Installation and purging test. 1m45.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/shm'] 1m45.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/shm'] 1m45.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/console'] 1m45.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/console'] 1m45.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/ptmx'] 1m45.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/ptmx'] 1m45.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/pts'] 1m45.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/dev/pts'] 1m45.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/proc'] 1m45.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmf0796r5/proc'] 1m45.3s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 1m45.4s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpmf0796r5'] 1m45.4s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpmf0796r5 1m45.4s INFO: PASS: All tests. 1m45.4s INFO: piuparts run ends. ret=0 End: 2024-02-23 02:10:02 GMT