Start: 2024-02-27 10:52:01 GMT Package: pymol Version: 2.5.0+dfsg-1 Installed-Size: 227 Maintainer: Debichem Team Architecture: all Depends: python3-pymol Recommends: apbs Description: Molecular Graphics System Homepage: https://www.pymol.org Description-md5: bfc8e8676a87c0058529a662aef95313 Tag: field::biology:structural, field::chemistry, implemented-in::python, interface::3d, interface::graphical, interface::x11, role::program, scope::utility, uitoolkit::tk, use::learning, use::viewing, works-with::image, x11::application Section: science Priority: optional Filename: pool/main/p/pymol/pymol_2.5.0+dfsg-1_all.deb Size: 189088 MD5sum: 896fa87d5364a3ab2c7d780337cbf297 SHA256: b0455ca57b384650de5b55f80ada08ab08798646d6692a3add4cc1713a7fae73 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-no-usr-share-doc --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt pymol=2.5.0+dfsg-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.3.1~202401311836~1.3-2-g28295102 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-no-usr-share-doc --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt pymol=2.5.0+dfsg-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-28-amd64 #1 SMP Debian 5.10.209-2 (2024-01-31) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp11d5e13a 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp11d5e13a 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/pts'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/pts'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/ptmx'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/console'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/console'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/shm'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/shm'] 0m0.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.4s DEBUG: Created policy-rc.d and chmodded it. 0m0.4s DEBUG: Created resolv.conf. 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp11d5e13a/tmp/scripts/ 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts-no-usr-share-doc to /srv/piuparts.debian.org/tmp/tmp11d5e13a/tmp/scripts/ 0m0.4s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', 'update'] 0m4.8s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [198 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9751 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7152 kB] Fetched 17.1 MB in 3s (5150 kB/s) Reading package lists... 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', 'update'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', '-yf', 'dist-upgrade'] 0m7.1s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: dpkg gcc-14-base libgcc-s1 liblzma5 libstdc++6 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2588 kB of archives. After this operation, 32.8 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 dpkg amd64 1.22.5 [1510 kB] Get:2 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14-20240221-2.1 [42.8 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14-20240221-2.1 [713 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14-20240221-2.1 [72.2 kB] Get:5 http://deb.debian.org/debian sid/main amd64 liblzma5 amd64 5.6.0-0.1 [250 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2588 kB in 0s (25.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5225 files and directories currently installed.) Preparing to unpack .../archives/dpkg_1.22.5_amd64.deb ... Unpacking dpkg (1.22.5) over (1.22.4) ... Setting up dpkg (1.22.5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5225 files and directories currently installed.) Preparing to unpack .../gcc-14-base_14-20240221-2.1_amd64.deb ... Unpacking gcc-14-base:amd64 (14-20240221-2.1) over (14-20240201-3) ... Setting up gcc-14-base:amd64 (14-20240221-2.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5225 files and directories currently installed.) Preparing to unpack .../libstdc++6_14-20240221-2.1_amd64.deb ... Unpacking libstdc++6:amd64 (14-20240221-2.1) over (14-20240201-3) ... Setting up libstdc++6:amd64 (14-20240221-2.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5225 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14-20240221-2.1_amd64.deb ... Unpacking libgcc-s1:amd64 (14-20240221-2.1) over (14-20240201-3) ... Setting up libgcc-s1:amd64 (14-20240221-2.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5225 files and directories currently installed.) Preparing to unpack .../liblzma5_5.6.0-0.1_amd64.deb ... Unpacking liblzma5:amd64 (5.6.0-0.1) over (5.4.5-0.3) ... Setting up liblzma5:amd64 (5.6.0-0.1) ... Processing triggers for libc-bin (2.37-15) ... 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', '-yf', 'dist-upgrade'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.5s DUMP: 15573bc067d10f702f893f33a4954d2a - 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.5s INFO: Running scripts post_setup 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_disable_usr_share_doc'] 0m7.5s DUMP: dpkg-query: no packages found matching systemd dpkg-query: no packages found matching systemd-sysv dpkg-query: no packages found matching sysv-rc 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_disable_usr_share_doc'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_dummy_users'] 0m8.6s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_dummy_users'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_forbid_home'] 0m8.6s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_forbid_home'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.7s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_minimize'] 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_minimize'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_zz_backports'] 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_setup_zz_backports'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', 'clean'] 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', 'clean'] 0m8.7s DEBUG: Recording chroot state 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.2s DUMP: install ok installed apt apt 2.7.12 install ok installed base-files base-files 13 install ok installed base-passwd base-passwd 3.6.3 install ok installed bash bash 5.2.21-2 install ok installed bsdutils bsdutils 1:2.39.3-6 install ok installed coreutils coreutils 9.4-3+b1 install ok installed dash dash 0.5.12-6 install ok installed debconf debconf 1.5.86 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.16 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.5 install ok installed e2fsprogs e2fsprogs 1.47.0-2+b1 install ok installed findutils findutils 4.9.0-5 install ok installed gcc-14-base:amd64 gcc-14-base 14-20240221-2.1 install ok installed gpgv gpgv 2.2.40-1.1+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.7.12 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-2 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-2 install ok installed libblkid1:amd64 libblkid1 2.39.3-6 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b2 install ok installed libc-bin libc-bin 2.37-15 install ok installed libc6:amd64 libc6 2.37-15 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.4-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-4+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.271+b1 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14-20240221-2.1 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.3-2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30:amd64 libgnutls30 3.8.3-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.47-3 install ok installed libhogweed6:amd64 libhogweed6 3.9.1-2+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1+b2 install ok installed liblzma5:amd64 liblzma5 5.6.0-0.1 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.39.3-6 install ok installed libnettle8:amd64 libnettle8 3.9.1-2+b1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.3-4 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-9.1+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-9.1+b1 install ok installed libpam-runtime libpam-runtime 1.5.2-9.1 install ok installed libpam0g:amd64 libpam0g 1.5.2-9.1+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1 install ok installed libselinux1:amd64 libselinux1 3.5-2 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b2 install ok installed libsepol2:amd64 libsepol2 3.5-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.39.3-6 install ok installed libss2:amd64 libss2 1.47.0-2+b1 install ok installed libssl3:amd64 libssl3 3.1.5-1 install ok installed libstdc++6:amd64 libstdc++6 14-20240221-2.1 install ok installed libsystemd0:amd64 libsystemd0 255.3-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.4+20240113-1 install ok installed libudev1:amd64 libudev1 255.3-2 install ok installed libunistring5:amd64 libunistring5 1.1-2 install ok installed libuuid1:amd64 libuuid1 2.39.3-6 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-2 install ok installed login login 1:4.13+dfsg1-4 install ok installed logsave logsave 1.47.0-2+b1 install ok installed mawk mawk 1.3.4.20240123-1 install ok installed mount mount 2.39.3-6 install ok installed ncurses-base ncurses-base 6.4+20240113-1 install ok installed ncurses-bin ncurses-bin 6.4+20240113-1 install ok installed passwd passwd 1:4.13+dfsg1-4 install ok installed perl-base perl-base 5.38.2-3 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.08-6 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.39.3-6 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg-3+b1 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg-divert', '--list'] 0m9.2s DUMP: local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg-divert', '--list'] 0m9.2s INFO: Running scripts is_testable 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/is_testable_uninstallable'] 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/is_testable_uninstallable'] 0m9.2s INFO: apt-cache does not know about any of the requested packages 0m9.2s INFO: Running scripts pre_test 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_test_exceptions'] 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_test_exceptions'] 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_test_root_password'] 0m9.3s DUMP: New password: Retype new password: passwd: password updated successfully 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_test_root_password'] 0m9.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 0m9.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 0m10.1s DEBUG: No broken symlinks as far as we can find. 0m10.1s INFO: Running scripts pre_install 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_database-server'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_database-server'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_exceptions'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_exceptions'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_extras'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_extras'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 0m10.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 0m10.9s DEBUG: No broken symlinks as far as we can find. 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-cache', 'policy'] 0m12.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-cache', 'policy'] 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-cache', 'policy', 'pymol'] 0m12.3s DUMP: pymol: Installed: (none) Candidate: 2.5.0+dfsg-1 Version table: 2.5.0+dfsg-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-cache', 'policy', 'pymol'] 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', '-y', 'install', 'pymol=2.5.0+dfsg-1'] 0m47.4s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libaec0 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libbrotli1 libbsd0 libcups2 libcurl3-gnutls libcurl4 libdbus-1-3 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-mesa0 libegl1 libelf1 libevdev2 libexpat1 libfontconfig1 libfreetype6 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglew2.2 libglib2.0-0 libglu1-mesa libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libgudev-1.0-0 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libice6 libicu72 libinput-bin libinput10 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 libllvm17 libmd4c0 libmtdev1 libncursesw6 libnetcdf19 libnghttp2-14 libnsl2 libopengl0 libpciaccess0 libpcre2-16-0 libpng16-16 libpsl5 libpython3-stdlib libpython3.11 libpython3.11-minimal libpython3.11-stdlib libpython3.12-minimal libpython3.12-stdlib libqt5core5a libqt5dbus5 libqt5designer5 libqt5gui5 libqt5help5 libqt5network5 libqt5opengl5 libqt5printsupport5 libqt5sql5 libqt5test5 libqt5widgets5 libqt5xml5 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsm6 libsqlite3-0 libssh2-1 libsz2 libtirpc-common libtirpc3 libvulkan1 libwacom-common libwacom9 libwayland-client0 libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxdmcp6 libxext6 libxfixes3 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxrender1 libxshmfence1 libxxf86vm1 libz3-4 media-types netbase pymol-data python3 python3-minimal python3-numpy python3-opengl python3-pkg-resources python3-pymol python3-pyqt5 python3-pyqt5.qtopengl python3-pyqt5.sip python3.11 python3.11-minimal python3.12 python3.12-minimal readline-common shared-mime-info x11-common xkb-data Suggested packages: cups-common glew-utils low-memory-monitor krb5-doc krb5-user pciutils libthai0 qgnomeplatform-qt5 qt5-image-formats-plugins lm-sensors libwacom-bin python3-doc python3-tk python3-venv gcc gfortran python3-dev python3-pytest libgle3 python3-setuptools python3.11-venv python3.11-doc binutils binfmt-support python3.12-venv python3.12-doc readline-doc Recommended packages: ca-certificates dbus libglib2.0-data xdg-user-dirs krb5-locales libldap-common libgpm2 publicsuffix qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme qtwayland5 libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase libsasl2-modules mesa-vulkan-drivers | vulkan-icd apbs libglut-dev The following NEW packages will be installed: fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libaec0 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libbrotli1 libbsd0 libcups2 libcurl3-gnutls libcurl4 libdbus-1-3 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-mesa0 libegl1 libelf1 libevdev2 libexpat1 libfontconfig1 libfreetype6 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglew2.2 libglib2.0-0 libglu1-mesa libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libgudev-1.0-0 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libice6 libicu72 libinput-bin libinput10 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 libllvm17 libmd4c0 libmtdev1 libncursesw6 libnetcdf19 libnghttp2-14 libnsl2 libopengl0 libpciaccess0 libpcre2-16-0 libpng16-16 libpsl5 libpython3-stdlib libpython3.11 libpython3.11-minimal libpython3.11-stdlib libpython3.12-minimal libpython3.12-stdlib libqt5core5a libqt5dbus5 libqt5designer5 libqt5gui5 libqt5help5 libqt5network5 libqt5opengl5 libqt5printsupport5 libqt5sql5 libqt5test5 libqt5widgets5 libqt5xml5 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsm6 libsqlite3-0 libssh2-1 libsz2 libtirpc-common libtirpc3 libvulkan1 libwacom-common libwacom9 libwayland-client0 libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxdmcp6 libxext6 libxfixes3 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxrender1 libxshmfence1 libxxf86vm1 libz3-4 media-types netbase pymol pymol-data python3 python3-minimal python3-numpy python3-opengl python3-pkg-resources python3-pymol python3-pyqt5 python3-pyqt5.qtopengl python3-pyqt5.sip python3.11 python3.11-minimal python3.12 python3.12-minimal readline-common shared-mime-info x11-common xkb-data 0 upgraded, 160 newly installed, 0 to remove and 0 not upgraded. Need to get 118 MB of archives. After this operation, 488 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libpython3.11-minimal amd64 3.11.8-1 [817 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.6.0-1 [101 kB] Get:3 http://deb.debian.org/debian sid/main amd64 python3.11-minimal amd64 3.11.8-1 [2037 kB] Get:4 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.11.6-1 [26.2 kB] Get:5 http://deb.debian.org/debian sid/main amd64 media-types all 10.1.0 [26.9 kB] Get:6 http://deb.debian.org/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.4+20240113-1 [135 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.20.1-5+b1 [33.2 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.20.1-5+b1 [80.0 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:11 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.20.1-5+b1 [333 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.20.1-5+b1 [135 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libtirpc-common all 1.3.4+ds-1 [10.7 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libtirpc3 amd64 1.3.4+ds-1 [82.1 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libnsl2 amd64 1.3.0-3 [40.0 kB] Get:16 http://deb.debian.org/debian sid/main amd64 readline-common all 8.2-3 [69.1 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libreadline8 amd64 8.2-3+b1 [167 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.45.1-1 [894 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libpython3.11-stdlib amd64 3.11.8-1 [1825 kB] Get:20 http://deb.debian.org/debian sid/main amd64 python3.11 amd64 3.11.8-1 [597 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.11.6-1 [9224 B] Get:22 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.11.6-1 [26.2 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libpython3.12-minimal amd64 3.12.2-1 [807 kB] Get:24 http://deb.debian.org/debian sid/main amd64 python3.12-minimal amd64 3.12.2-1 [2186 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libpng16-16 amd64 1.6.43-1 [277 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libfreetype6 amd64 2.13.2+dfsg-1+b1 [439 kB] Get:28 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:29 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:30 http://deb.debian.org/debian sid/main amd64 fontconfig-config amd64 2.15.0-1 [317 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libfontconfig1 amd64 2.15.0-1 [388 kB] Get:32 http://deb.debian.org/debian sid/main amd64 fontconfig amd64 2.15.0-1 [462 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libaec0 amd64 1.1.2-1 [23.4 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libavahi-common-data amd64 0.8-13+b1 [111 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libavahi-common3 amd64 0.8-13+b1 [43.3 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libdbus-1-3 amd64 1.14.10-4 [203 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libavahi-client3 amd64 0.8-13+b1 [47.1 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libbsd0 amd64 0.12.0-1 [129 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libcups2 amd64 2.4.7-1+b1 [247 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-4+b1 [19.7 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-4+b1 [57.0 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5+b3 [184 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.59.0-1 [74.3 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libpsl5 amd64 0.21.2-1+b1 [59.1 kB] Get:46 http://deb.debian.org/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libssh2-1 amd64 1.11.0-4 [215 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libcurl3-gnutls amd64 8.6.0-3 [421 kB] Get:49 http://deb.debian.org/debian sid/main amd64 libcurl4 amd64 8.6.0-3 [430 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libdouble-conversion3 amd64 3.3.0-1+b1 [41.0 kB] Get:51 http://deb.debian.org/debian sid/main amd64 libdrm-common all 2.4.120-2 [7688 B] Get:52 http://deb.debian.org/debian sid/main amd64 libdrm2 amd64 2.4.120-2 [38.1 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libdrm-amdgpu1 amd64 2.4.120-2 [21.4 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libpciaccess0 amd64 0.17-3 [51.6 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libdrm-intel1 amd64 2.4.120-2 [62.7 kB] Get:56 http://deb.debian.org/debian sid/main amd64 libdrm-nouveau2 amd64 2.4.120-2 [19.3 kB] Get:57 http://deb.debian.org/debian sid/main amd64 libdrm-radeon1 amd64 2.4.120-2 [22.2 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libedit2 amd64 3.1-20230828-1 [93.1 kB] Get:59 http://deb.debian.org/debian sid/main amd64 libwayland-server0 amd64 1.22.0-2.1+b1 [33.0 kB] Get:60 http://deb.debian.org/debian sid/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:62 http://deb.debian.org/debian sid/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:63 http://deb.debian.org/debian sid/main amd64 libxcb-randr0 amd64 1.15-1 [117 kB] Get:64 http://deb.debian.org/debian sid/main amd64 libgbm1 amd64 24.0.1-1 [40.5 kB] Get:65 http://deb.debian.org/debian sid/main amd64 libglapi-mesa amd64 24.0.1-1 [36.1 kB] Get:66 http://deb.debian.org/debian sid/main amd64 libwayland-client0 amd64 1.22.0-2.1+b1 [25.7 kB] Get:67 http://deb.debian.org/debian sid/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:68 http://deb.debian.org/debian sid/main amd64 libx11-6 amd64 2:1.8.7-1 [802 kB] Get:69 http://deb.debian.org/debian sid/main amd64 libx11-xcb1 amd64 2:1.8.7-1 [232 kB] Get:70 http://deb.debian.org/debian sid/main amd64 libxcb-dri2-0 amd64 1.15-1 [107 kB] Get:71 http://deb.debian.org/debian sid/main amd64 libxcb-dri3-0 amd64 1.15-1 [107 kB] Get:72 http://deb.debian.org/debian sid/main amd64 libxcb-present0 amd64 1.15-1 [105 kB] Get:73 http://deb.debian.org/debian sid/main amd64 libxcb-sync1 amd64 1.15-1 [109 kB] Get:74 http://deb.debian.org/debian sid/main amd64 libxcb-xfixes0 amd64 1.15-1 [109 kB] Get:75 http://deb.debian.org/debian sid/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get:76 http://deb.debian.org/debian sid/main amd64 libegl-mesa0 amd64 24.0.1-1 [119 kB] Get:77 http://deb.debian.org/debian sid/main amd64 libelf1 amd64 0.190-1+b1 [176 kB] Get:78 http://deb.debian.org/debian sid/main amd64 libevdev2 amd64 1.13.1+dfsg-1 [32.0 kB] Get:79 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14-20240221-2.1 [836 kB] Get:80 http://deb.debian.org/debian sid/main amd64 libglvnd0 amd64 1.7.0-1 [51.3 kB] Get:81 http://deb.debian.org/debian sid/main amd64 libxcb-glx0 amd64 1.15-1 [122 kB] Get:82 http://deb.debian.org/debian sid/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get:83 http://deb.debian.org/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:84 http://deb.debian.org/debian sid/main amd64 libxfixes3 amd64 1:6.0.0-2 [22.7 kB] Get:85 http://deb.debian.org/debian sid/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:86 http://deb.debian.org/debian sid/main amd64 libvulkan1 amd64 1.3.275.0-1 [124 kB] Get:87 http://deb.debian.org/debian sid/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get:88 http://deb.debian.org/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b2 [692 kB] Get:89 http://deb.debian.org/debian sid/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get:90 http://deb.debian.org/debian sid/main amd64 libllvm17 amd64 1:17.0.6-5 [23.7 MB] Get:91 http://deb.debian.org/debian sid/main amd64 libsensors-config all 1:3.6.0-9 [14.6 kB] Get:92 http://deb.debian.org/debian sid/main amd64 libsensors5 amd64 1:3.6.0-9 [34.6 kB] Get:93 http://deb.debian.org/debian sid/main amd64 libgl1-mesa-dri amd64 24.0.1-1 [8278 kB] Get:94 http://deb.debian.org/debian sid/main amd64 libglx-mesa0 amd64 24.0.1-1 [151 kB] Get:95 http://deb.debian.org/debian sid/main amd64 libglx0 amd64 1.7.0-1 [34.7 kB] Get:96 http://deb.debian.org/debian sid/main amd64 libgl1 amd64 1.7.0-1 [89.7 kB] Get:97 http://deb.debian.org/debian sid/main amd64 libglew2.2 amd64 2.2.0-4+b1 [175 kB] Get:98 http://deb.debian.org/debian sid/main amd64 libglib2.0-0 amd64 2.78.4-1 [1452 kB] Get:99 http://deb.debian.org/debian sid/main amd64 libopengl0 amd64 1.7.0-1 [30.8 kB] Get:100 http://deb.debian.org/debian sid/main amd64 libglu1-mesa amd64 9.0.2-1.1 [178 kB] Get:101 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 14-20240221-2.1 [136 kB] Get:102 http://deb.debian.org/debian sid/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get:103 http://deb.debian.org/debian sid/main amd64 libgudev-1.0-0 amd64 238-3 [14.3 kB] Get:104 http://deb.debian.org/debian sid/main amd64 libharfbuzz0b amd64 8.3.0-2 [2213 kB] Get:105 http://deb.debian.org/debian sid/main amd64 libsz2 amd64 1.1.2-1 [7684 B] Get:106 http://deb.debian.org/debian sid/main amd64 libhdf5-103-1 amd64 1.10.10+repack-3+b1 [1243 kB] Get:107 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-100 amd64 1.10.10+repack-3+b1 [63.3 kB] Get:108 http://deb.debian.org/debian sid/main amd64 x11-common all 1:7.7+23 [252 kB] Get:109 http://deb.debian.org/debian sid/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get:110 http://deb.debian.org/debian sid/main amd64 libwacom-common all 2.10.0-1 [62.4 kB] Get:111 http://deb.debian.org/debian sid/main amd64 libwacom9 amd64 2.10.0-1 [22.4 kB] Get:112 http://deb.debian.org/debian sid/main amd64 libinput-bin amd64 1.25.0-1 [24.6 kB] Get:113 http://deb.debian.org/debian sid/main amd64 libmtdev1 amd64 1.1.6-1+b1 [22.2 kB] Get:114 http://deb.debian.org/debian sid/main amd64 libinput10 amd64 1.25.0-1 [128 kB] Get:115 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo amd64 1:2.1.5-2+b2 [167 kB] Get:116 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get:117 http://deb.debian.org/debian sid/main amd64 libmd4c0 amd64 0.4.8-1+b1 [45.1 kB] Get:118 http://deb.debian.org/debian sid/main amd64 libnetcdf19 amd64 1:4.9.2-3+b1 [471 kB] Get:119 http://deb.debian.org/debian sid/main amd64 libpcre2-16-0 amd64 10.42-4+b1 [246 kB] Get:120 http://deb.debian.org/debian sid/main amd64 libpython3.11 amd64 3.11.8-1 [1992 kB] Get:121 http://deb.debian.org/debian sid/main amd64 libpython3.12-stdlib amd64 3.12.2-1 [1929 kB] Get:122 http://deb.debian.org/debian sid/main amd64 shared-mime-info amd64 2.4-1 [751 kB] Get:123 http://deb.debian.org/debian sid/main amd64 libqt5core5a amd64 5.15.10+dfsg-7 [1834 kB] Get:124 http://deb.debian.org/debian sid/main amd64 libqt5dbus5 amd64 5.15.10+dfsg-7 [213 kB] Get:125 http://deb.debian.org/debian sid/main amd64 libegl1 amd64 1.7.0-1 [34.0 kB] Get:126 http://deb.debian.org/debian sid/main amd64 libqt5network5 amd64 5.15.10+dfsg-7 [676 kB] Get:127 http://deb.debian.org/debian sid/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:128 http://deb.debian.org/debian sid/main amd64 libxcb-icccm4 amd64 0.4.1-1.1+b1 [26.8 kB] Get:129 http://deb.debian.org/debian sid/main amd64 libxcb-util1 amd64 0.4.0-1+b1 [23.2 kB] Get:130 http://deb.debian.org/debian sid/main amd64 libxcb-image0 amd64 0.4.0-2+b1 [22.2 kB] Get:131 http://deb.debian.org/debian sid/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b2 [16.4 kB] Get:132 http://deb.debian.org/debian sid/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get:133 http://deb.debian.org/debian sid/main amd64 libxcb-render-util0 amd64 0.3.9-1+b1 [18.3 kB] Get:134 http://deb.debian.org/debian sid/main amd64 libxcb-shape0 amd64 1.15-1 [106 kB] Get:135 http://deb.debian.org/debian sid/main amd64 libxcb-xinerama0 amd64 1.15-1 [105 kB] Get:136 http://deb.debian.org/debian sid/main amd64 libxcb-xinput0 amd64 1.15-1 [130 kB] Get:137 http://deb.debian.org/debian sid/main amd64 libxcb-xkb1 amd64 1.15-1 [129 kB] Get:138 http://deb.debian.org/debian sid/main amd64 xkb-data all 2.41-2 [795 kB] Get:139 http://deb.debian.org/debian sid/main amd64 libxkbcommon0 amd64 1.6.0-1 [108 kB] Get:140 http://deb.debian.org/debian sid/main amd64 libxkbcommon-x11-0 amd64 1.6.0-1 [16.0 kB] Get:141 http://deb.debian.org/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get:142 http://deb.debian.org/debian sid/main amd64 libqt5gui5 amd64 5.15.10+dfsg-7 [3442 kB] Get:143 http://deb.debian.org/debian sid/main amd64 libqt5widgets5 amd64 5.15.10+dfsg-7 [2385 kB] Get:144 http://deb.debian.org/debian sid/main amd64 libqt5xml5 amd64 5.15.10+dfsg-7 [123 kB] Get:145 http://deb.debian.org/debian sid/main amd64 libqt5designer5 amd64 5.15.10-6 [2749 kB] Get:146 http://deb.debian.org/debian sid/main amd64 libqt5sql5 amd64 5.15.10+dfsg-7 [123 kB] Get:147 http://deb.debian.org/debian sid/main amd64 libqt5help5 amd64 5.15.10-6 [149 kB] Get:148 http://deb.debian.org/debian sid/main amd64 libqt5opengl5 amd64 5.15.10+dfsg-7 [149 kB] Get:149 http://deb.debian.org/debian sid/main amd64 libqt5printsupport5 amd64 5.15.10+dfsg-7 [203 kB] Get:150 http://deb.debian.org/debian sid/main amd64 libqt5test5 amd64 5.15.10+dfsg-7 [148 kB] Get:151 http://deb.debian.org/debian sid/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get:152 http://deb.debian.org/debian sid/main amd64 python3.12 amd64 3.12.2-1 [653 kB] Get:153 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:1.24.2-2 [6299 kB] Get:154 http://deb.debian.org/debian sid/main amd64 python3-opengl all 3.1.7+dfsg-1 [604 kB] Get:155 http://deb.debian.org/debian sid/main amd64 python3-pyqt5.sip amd64 12.13.0-1+b1 [79.5 kB] Get:156 http://deb.debian.org/debian sid/main amd64 python3-pyqt5 amd64 5.15.10+dfsg-1 [2503 kB] Get:157 http://deb.debian.org/debian sid/main amd64 python3-pyqt5.qtopengl amd64 5.15.10+dfsg-1 [207 kB] Get:158 http://deb.debian.org/debian sid/main amd64 pymol-data all 2.5.0+dfsg-1 [1401 kB] Get:159 http://deb.debian.org/debian sid/main amd64 python3-pymol amd64 2.5.0+dfsg-1+b4 [6971 kB] Get:160 http://deb.debian.org/debian sid/main amd64 pymol all 2.5.0+dfsg-1 [189 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 118 MB in 2s (53.2 MB/s) Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5227 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.8-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.8-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.8-1_amd64.deb ... Unpacking python3.11-minimal (3.11.8-1) ... Setting up libpython3.11-minimal:amd64 (3.11.8-1) ... Setting up libexpat1:amd64 (2.6.0-1) ... Setting up python3.11-minimal (3.11.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5543 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.11.6-1_amd64.deb ... 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(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6081 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.6-1_amd64.deb ... Unpacking python3 (3.11.6-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../001-libpython3.12-minimal_3.12.2-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.2-1) ... Selecting previously unselected package python3.12-minimal. 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Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../025-libssh2-1_1.11.0-4_amd64.deb ... Unpacking libssh2-1:amd64 (1.11.0-4) ... Selecting previously unselected package libcurl3-gnutls:amd64. Preparing to unpack .../026-libcurl3-gnutls_8.6.0-3_amd64.deb ... Unpacking libcurl3-gnutls:amd64 (8.6.0-3) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../027-libcurl4_8.6.0-3_amd64.deb ... Unpacking libcurl4:amd64 (8.6.0-3) ... Selecting previously unselected package libdouble-conversion3:amd64. Preparing to unpack .../028-libdouble-conversion3_3.3.0-1+b1_amd64.deb ... Unpacking libdouble-conversion3:amd64 (3.3.0-1+b1) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../029-libdrm-common_2.4.120-2_all.deb ... Unpacking libdrm-common (2.4.120-2) ... Selecting previously unselected package libdrm2:amd64. 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Setting up libwayland-server0:amd64 (1.22.0-2.1+b1) ... Setting up libpciaccess0:amd64 (0.17-3) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libdouble-conversion3:amd64 (3.3.0-1+b1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libpsl5:amd64 (0.21.2-1+b1) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up libglib2.0-0:amd64 (2.78.4-1) ... No schema files found: doing nothing. Setting up libglvnd0:amd64 (1.7.0-1) ... Setting up libtirpc-common (1.3.4+ds-1) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libsqlite3-0:amd64 (3.45.1-1) ... Setting up libpython3.12-minimal:amd64 (3.12.2-1) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libsensors-config (1:3.6.0-9) ... Setting up libnghttp2-14:amd64 (1.59.0-1) ... Setting up xkb-data (2.41-2) ... Setting up libgomp1:amd64 (14-20240221-2.1) ... Setting up libpcre2-16-0:amd64 (10.42-4+b1) ... Setting up libaec0:amd64 (1.1.2-1) ... Setting up libopengl0:amd64 (1.7.0-1) ... Setting up libkrb5support0:amd64 (1.20.1-5+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Setting up libz3-4:amd64 (4.8.12-3.1+b2) ... Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.5-2+b2) ... Setting up libx11-data (2:1.8.7-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libavahi-common-data:amd64 (0.8-13+b1) ... Setting up libdbus-1-3:amd64 (1.14.10-4) ... Setting up pymol-data (2.5.0+dfsg-1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16:amd64 (1.6.43-1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libsensors5:amd64 (1:3.6.0-9) ... Setting up libncursesw6:amd64 (6.4+20240113-1) ... Setting up libk5crypto3:amd64 (1.20.1-5+b1) ... Setting up libglapi-mesa:amd64 (24.0.1-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Setting up libgfortran5:amd64 (14-20240221-2.1) ... Setting up libmtdev1:amd64 (1.1.6-1+b1) ... Setting up libvulkan1:amd64 (1.3.275.0-1) ... Setting up libxshmfence1:amd64 (1.3-1) ... Setting up libmd4c0:amd64 (0.4.8-1+b1) ... Setting up libssh2-1:amd64 (1.11.0-4) ... Setting up netbase (6.4) ... Setting up libkrb5-3:amd64 (1.20.1-5+b1) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1) ... Setting up libbsd0:amd64 (0.12.0-1) ... Setting up libdrm-common (2.4.120-2) ... Setting up libelf1:amd64 (0.190-1+b1) ... Setting up libevdev2:amd64 (1.13.1+dfsg-1) ... Setting up readline-common (8.2-3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b2) ... Setting up libgudev-1.0-0:amd64 (238-3) ... Setting up libsz2:amd64 (1.1.2-1) ... Setting up libwacom-common (2.10.0-1) ... Setting up libxkbcommon0:amd64 (1.6.0-1) ... Setting up libwayland-client0:amd64 (1.22.0-2.1+b1) ... Setting up python3.12-minimal (3.12.2-1) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.15-1) ... Setting up libxcb-xfixes0:amd64 (1.15-1) ... Setting up libxcb-xinput0:amd64 (1.15-1) ... Setting up libxcb-render0:amd64 (1.15-1) ... Setting up libwacom9:amd64 (2.10.0-1) ... Setting up fontconfig-config (2.15.0-1) ... Setting up libxcb-glx0:amd64 (1.15-1) ... Setting up libedit2:amd64 (3.1-20230828-1) ... Setting up libreadline8:amd64 (8.2-3+b1) ... Setting up libxcb-keysyms1:amd64 (0.4.0-1+b2) ... Setting up libxcb-shape0:amd64 (1.15-1) ... Setting up libavahi-common3:amd64 (0.8-13+b1) ... Setting up libxcb-render-util0:amd64 (0.3.9-1+b1) ... Setting up libxcb-shm0:amd64 (1.15-1) ... Setting up libxcb-icccm4:amd64 (0.4.1-1.1+b1) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Setting up libxcb-util1:amd64 (0.4.0-1+b1) ... Setting up libinput-bin (1.25.0-1) ... Setting up libxcb-xkb1:amd64 (1.15-1) ... Setting up libxcb-image0:amd64 (0.4.0-2+b1) ... Setting up libxcb-present0:amd64 (1.15-1) ... Setting up libxcb-xinerama0:amd64 (1.15-1) ... Setting up libfreetype6:amd64 (2.13.2+dfsg-1+b1) ... Setting up libxcb-sync1:amd64 (1.15-1) ... Setting up shared-mime-info (2.4-1) ... Setting up libxkbcommon-x11-0:amd64 (1.6.0-1) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... Setting up libqt5core5a:amd64 (5.15.10+dfsg-7) ... Setting up libxcb-dri2-0:amd64 (1.15-1) ... Setting up libdrm2:amd64 (2.4.120-2) ... Setting up libqt5dbus5:amd64 (5.15.10+dfsg-7) ... Setting up libxcb-randr0:amd64 (1.15-1) ... Setting up libcurl4:amd64 (8.6.0-3) ... Setting up libx11-6:amd64 (2:1.8.7-1) ... Setting up libharfbuzz0b:amd64 (8.3.0-2) ... Setting up libfontconfig1:amd64 (2.15.0-1) ... Setting up libqt5test5:amd64 (5.15.10+dfsg-7) ... Setting up libllvm17:amd64 (1:17.0.6-5) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libavahi-client3:amd64 (0.8-13+b1) ... Setting up libdrm-amdgpu1:amd64 (2.4.120-2) ... Setting up libtirpc3:amd64 (1.3.4+ds-1) ... Setting up libxcb-dri3-0:amd64 (1.15-1) ... Setting up libinput10:amd64 (1.25.0-1) ... Setting up libx11-xcb1:amd64 (2:1.8.7-1) ... Setting up fontconfig (2.15.0-1) ... Regenerating fonts cache... done. Setting up libdrm-nouveau2:amd64 (2.4.120-2) ... Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libgbm1:amd64 (24.0.1-1) ... Setting up libdrm-radeon1:amd64 (2.4.120-2) ... Setting up libdrm-intel1:amd64 (2.4.120-2) ... Setting up libgl1-mesa-dri:amd64 (24.0.1-1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libcurl3-gnutls:amd64 (8.6.0-3) ... Setting up libqt5network5:amd64 (5.15.10+dfsg-7) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libqt5sql5:amd64 (5.15.10+dfsg-7) ... Setting up libqt5xml5:amd64 (5.15.10+dfsg-7) ... Setting up libegl-mesa0:amd64 (24.0.1-1) ... Setting up libxfixes3:amd64 (1:6.0.0-2) ... Setting up libcups2:amd64 (2.4.7-1+b1) ... Setting up libhdf5-103-1:amd64 (1.10.10+repack-3+b1) ... Setting up libnsl2:amd64 (1.3.0-3) ... Setting up libegl1:amd64 (1.7.0-1) ... Setting up libhdf5-hl-100:amd64 (1.10.10+repack-3+b1) ... Setting up libglx-mesa0:amd64 (24.0.1-1) ... Setting up libpython3.12-stdlib:amd64 (3.12.2-1) ... Setting up libglx0:amd64 (1.7.0-1) ... Setting up libpython3.11-stdlib:amd64 (3.11.8-1) ... Setting up python3.12 (3.12.2-1) ... Setting up libgl1:amd64 (1.7.0-1) ... Setting up libglew2.2:amd64 (2.2.0-4+b1) ... Setting up libnetcdf19:amd64 (1:4.9.2-3+b1) ... Setting up libpython3-stdlib:amd64 (3.11.6-1) ... Setting up python3.11 (3.11.8-1) ... Setting up libpython3.11:amd64 (3.11.8-1) ... Setting up libqt5gui5:amd64 (5.15.10+dfsg-7) ... Setting up libqt5widgets5:amd64 (5.15.10+dfsg-7) ... Setting up python3 (3.11.6-1) ... Setting up python3-opengl (3.1.7+dfsg-1) ... /usr/lib/python3/dist-packages/OpenGL/GL/AMD/vertex_shader_tessellator.py:1: SyntaxWarning: invalid escape sequence '\ ' '''OpenGL extension AMD.vertex_shader_tessellator Setting up libqt5help5:amd64 (5.15.10-6) ... Setting up libqt5printsupport5:amd64 (5.15.10+dfsg-7) ... Setting up python3-pyqt5.sip (12.13.0-1+b1) ... Setting up libqt5opengl5:amd64 (5.15.10+dfsg-7) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up libqt5designer5:amd64 (5.15.10-6) ... Setting up python3-numpy (1:1.24.2-2) ... Setting up python3-pyqt5 (5.15.10+dfsg-1) ... Setting up python3-pyqt5.qtopengl (5.15.10+dfsg-1) ... Setting up python3-pymol (2.5.0+dfsg-1+b4) ... /usr/lib/python3/dist-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s' getkee = re.compile("^>\s+<([^>]*)>") /usr/lib/python3/dist-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s' gettag = re.compile("^>\s+<[^>]*>\s+\((.*)\)") /usr/lib/python3/dist-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.' g = re.search("(.*)(\..*)$", save_file) /usr/lib/python3/dist-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.' if re.search("\.pym*$|\.PYM*$",ofile): /usr/lib/python3/dist-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.' if re.search("[0-9]*\.png$",fname): # remove numbering, etc. /usr/lib/python3/dist-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.' fname = re.sub("[0-9]*\.png$","",fname) /usr/lib/python3/dist-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.' if re.search("[0-9]*\.ppm$",fname): /usr/lib/python3/dist-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.' fname = re.sub("[0-9]*\.ppm$","",fname) /usr/lib/python3/dist-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W' '''Return full path to executable or None. /usr/lib/python3/dist-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s' input = re.sub("\s"," ",specification) /usr/lib/python3/dist-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\[' remove_lists_re = re.compile("\[[^\]]*\]") /usr/lib/python3/dist-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.' if re.search("\.py$|\.pym$",path) is not None: /usr/lib/python3/dist-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p' ''' /usr/lib/python3/dist-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.' re_pat = re.compile("[0-9]+\.") /usr/lib/python3/dist-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.' new_file = re.sub("\.pse$",".psw",new_file,re.I) /usr/lib/python3/dist-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.' new_file = re.sub("\.psw$",".pse",new_file,re.I) /usr/lib/python3/dist-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8' self.prefix = 'Label text: \888' Setting up pymol (2.5.0+dfsg-1) ... Processing triggers for libc-bin (2.37-15) ... 0m47.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', '-y', 'install', 'pymol=2.5.0+dfsg-1'] 0m47.4s INFO: Running scripts post_install 0m47.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_install_exceptions'] 0m47.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_install_exceptions'] 0m47.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 0m48.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 0m50.2s ERROR: WARN: Broken symlinks: /usr/lib/x86_64-linux-gnu/qt-default/qtchooser/default.conf -> ../../../../share/qtchooser/qt5-x86_64-linux-gnu.conf (libqt5core5a:amd64) /usr/share/doc/python3.12/changelog.gz -> NEWS.gz (python3.12) /usr/share/doc/libhdf5-hl-100/RELEASE.txt.gz -> changelog.gz (libhdf5-hl-100:amd64) /usr/share/doc/libhdf5-103-1/RELEASE.txt.gz -> changelog.gz (libhdf5-103-1:amd64) /usr/share/doc/libxml2/NEWS.gz -> changelog.gz (libxml2:amd64) /usr/share/doc/python3.11/python-policy.txt.gz -> ../python3/python-policy.txt.gz (python3) /usr/share/doc/python3.11/changelog.gz -> NEWS.gz (python3.11) 0m50.2s INFO: /bin converted to /usr/bin by /usr merge 0m50.2s INFO: /lib converted to /usr/lib by /usr merge 0m50.2s INFO: /lib/init converted to /usr/lib/init by /usr merge 0m50.2s INFO: /lib/lsb converted to /usr/lib/lsb by /usr merge 0m50.2s INFO: /lib/lsb/init-functions.d converted to /usr/lib/lsb/init-functions.d by /usr merge 0m50.2s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 0m50.2s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 0m50.2s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 0m50.2s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 0m50.2s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 0m50.2s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 0m50.2s INFO: /lib64 converted to /usr/lib64 by /usr merge 0m50.2s INFO: /sbin converted to /usr/sbin by /usr merge 0m50.9s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', '-ac', '--ignore-obsolete'] 0m54.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', '-ac', '--ignore-obsolete'] 0m54.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m54.1s DUMP: 0.15.6 0m54.1s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m54.1s INFO: Running adequate version 0.15.6 now. 0m54.1s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'pymol'] 0m54.2s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'pymol'] 0m54.2s INFO: Running scripts pre_remove 0m54.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m54.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m54.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m54.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m54.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m59.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m59.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m59.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m59.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m59.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m59.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_exceptions'] 0m59.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/pre_remove_exceptions'] 0m59.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m59.6s DUMP: install ok installed apt apt 2.7.12 install ok installed base-files base-files 13 install ok installed base-passwd base-passwd 3.6.3 install ok installed bash bash 5.2.21-2 install ok installed bsdutils bsdutils 1:2.39.3-6 install ok installed coreutils coreutils 9.4-3+b1 install ok installed dash dash 0.5.12-6 install ok installed debconf debconf 1.5.86 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.16 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.5 install ok installed e2fsprogs e2fsprogs 1.47.0-2+b1 install ok installed findutils findutils 4.9.0-5 install ok installed fontconfig fontconfig 2.15.0-1 install ok installed fontconfig-config fontconfig-config 2.15.0-1 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-8 install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-8 install ok installed gcc-14-base:amd64 gcc-14-base 14-20240221-2.1 install ok installed gpgv gpgv 2.2.40-1.1+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-1 install ok installed libaec0:amd64 libaec0 1.1.2-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.7.12 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-2 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-2 install ok installed libavahi-client3:amd64 libavahi-client3 0.8-13+b1 install ok installed libavahi-common-data:amd64 libavahi-common-data 0.8-13+b1 install ok installed libavahi-common3:amd64 libavahi-common3 0.8-13+b1 install ok installed libblas3:amd64 libblas3 3.12.0-3 install ok installed libblkid1:amd64 libblkid1 2.39.3-6 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b3 install ok installed libbsd0:amd64 libbsd0 0.12.0-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b2 install ok installed libc-bin libc-bin 2.37-15 install ok installed libc6:amd64 libc6 2.37-15 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.4-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libcups2:amd64 libcups2 2.4.7-1+b1 install ok installed libcurl3-gnutls:amd64 libcurl3-gnutls 8.6.0-3 install ok installed libcurl4:amd64 libcurl4 8.6.0-3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-4+b1 install ok installed libdbus-1-3:amd64 libdbus-1-3 1.14.10-4 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.271+b1 install ok installed libdouble-conversion3:amd64 libdouble-conversion3 3.3.0-1+b1 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.120-2 install ok installed libdrm-common libdrm-common 2.4.120-2 install ok installed libdrm-intel1:amd64 libdrm-intel1 2.4.120-2 install ok installed libdrm-nouveau2:amd64 libdrm-nouveau2 2.4.120-2 install ok installed libdrm-radeon1:amd64 libdrm-radeon1 2.4.120-2 install ok installed libdrm2:amd64 libdrm2 2.4.120-2 install ok installed libedit2:amd64 libedit2 3.1-20230828-1 install ok installed libegl-mesa0:amd64 libegl-mesa0 24.0.1-1 install ok installed libegl1:amd64 libegl1 1.7.0-1 install ok installed libelf1:amd64 libelf1 0.190-1+b1 install ok installed libevdev2:amd64 libevdev2 1.13.1+dfsg-1 install ok installed libexpat1:amd64 libexpat1 2.6.0-1 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libfontconfig1:amd64 libfontconfig1 2.15.0-1 install ok installed libfreetype6:amd64 libfreetype6 2.13.2+dfsg-1+b1 install ok installed libgbm1:amd64 libgbm1 24.0.1-1 install ok installed libgcc-s1:amd64 libgcc-s1 14-20240221-2.1 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.3-2 install ok installed libgfortran5:amd64 libgfortran5 14-20240221-2.1 install ok installed libgl1:amd64 libgl1 1.7.0-1 install ok installed libgl1-mesa-dri:amd64 libgl1-mesa-dri 24.0.1-1 install ok installed libglapi-mesa:amd64 libglapi-mesa 24.0.1-1 install ok installed libglew2.2:amd64 libglew2.2 2.2.0-4+b1 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.78.4-1 install ok installed libglu1-mesa:amd64 libglu1-mesa 9.0.2-1.1 install ok installed libglvnd0:amd64 libglvnd0 1.7.0-1 install ok installed libglx-mesa0:amd64 libglx-mesa0 24.0.1-1 install ok installed libglx0:amd64 libglx0 1.7.0-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30:amd64 libgnutls30 3.8.3-1 install ok installed libgomp1:amd64 libgomp1 14-20240221-2.1 install ok installed libgpg-error0:amd64 libgpg-error0 1.47-3 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.20.1-5+b1 install ok installed libgudev-1.0-0:amd64 libgudev-1.0-0 238-3 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 8.3.0-2 install ok installed libhdf5-103-1:amd64 libhdf5-103-1 1.10.10+repack-3+b1 install ok installed libhdf5-hl-100:amd64 libhdf5-hl-100 1.10.10+repack-3+b1 install ok installed libhogweed6:amd64 libhogweed6 3.9.1-2+b1 install ok installed libice6:amd64 libice6 2:1.0.10-1 install ok installed libicu72:amd64 libicu72 72.1-4+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libinput-bin libinput-bin 1.25.0-1 install ok installed libinput10:amd64 libinput10 1.25.0-1 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-2+b2 install ok installed libk5crypto3:amd64 libk5crypto3 1.20.1-5+b1 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-3 install ok installed libkrb5-3:amd64 libkrb5-3 1.20.1-5+b1 install ok installed libkrb5support0:amd64 libkrb5support0 1.20.1-5+b1 install ok installed liblapack3:amd64 liblapack3 3.12.0-3 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.13+dfsg-5+b3 install ok installed libllvm17:amd64 libllvm17 1:17.0.6-5 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1+b2 install ok installed liblzma5:amd64 liblzma5 5.6.0-0.1 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmd4c0:amd64 libmd4c0 0.4.8-1+b1 install ok installed libmount1:amd64 libmount1 2.39.3-6 install ok installed libmtdev1:amd64 libmtdev1 1.1.6-1+b1 install ok installed libncursesw6:amd64 libncursesw6 6.4+20240113-1 install ok installed libnetcdf19:amd64 libnetcdf19 1:4.9.2-3+b1 install ok installed libnettle8:amd64 libnettle8 3.9.1-2+b1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.59.0-1 install ok installed libnsl2:amd64 libnsl2 1.3.0-3 install ok installed libopengl0:amd64 libopengl0 1.7.0-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.3-4 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-9.1+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-9.1+b1 install ok installed libpam-runtime libpam-runtime 1.5.2-9.1 install ok installed libpam0g:amd64 libpam0g 1.5.2-9.1+b1 install ok installed libpciaccess0:amd64 libpciaccess0 0.17-3 install ok installed libpcre2-16-0:amd64 libpcre2-16-0 10.42-4+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libpng16-16:amd64 libpng16-16 1.6.43-1 install ok installed libpsl5:amd64 libpsl5 0.21.2-1+b1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.11.6-1 install ok installed libpython3.11:amd64 libpython3.11 3.11.8-1 install ok installed libpython3.11-minimal:amd64 libpython3.11-minimal 3.11.8-1 install ok installed libpython3.11-stdlib:amd64 libpython3.11-stdlib 3.11.8-1 install ok installed libpython3.12-minimal:amd64 libpython3.12-minimal 3.12.2-1 install ok installed libpython3.12-stdlib:amd64 libpython3.12-stdlib 3.12.2-1 install ok installed libqt5core5a:amd64 libqt5core5a 5.15.10+dfsg-7 install ok installed libqt5dbus5:amd64 libqt5dbus5 5.15.10+dfsg-7 install ok installed libqt5designer5:amd64 libqt5designer5 5.15.10-6 install ok installed libqt5gui5:amd64 libqt5gui5 5.15.10+dfsg-7 install ok installed libqt5help5:amd64 libqt5help5 5.15.10-6 install ok installed libqt5network5:amd64 libqt5network5 5.15.10+dfsg-7 install ok installed libqt5opengl5:amd64 libqt5opengl5 5.15.10+dfsg-7 install ok installed libqt5printsupport5:amd64 libqt5printsupport5 5.15.10+dfsg-7 install ok installed libqt5sql5:amd64 libqt5sql5 5.15.10+dfsg-7 install ok installed libqt5test5:amd64 libqt5test5 5.15.10+dfsg-7 install ok installed libqt5widgets5:amd64 libqt5widgets5 5.15.10+dfsg-7 install ok installed libqt5xml5:amd64 libqt5xml5 5.15.10+dfsg-7 install ok installed libreadline8:amd64 libreadline8 8.2-3+b1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-4+b1 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1 install ok installed libselinux1:amd64 libselinux1 3.5-2 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b2 install ok installed libsensors-config libsensors-config 1:3.6.0-9 install ok installed libsensors5:amd64 libsensors5 1:3.6.0-9 install ok installed libsepol2:amd64 libsepol2 3.5-2 install ok installed libsm6:amd64 libsm6 2:1.2.3-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.39.3-6 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.45.1-1 install ok installed libss2:amd64 libss2 1.47.0-2+b1 install ok installed libssh2-1:amd64 libssh2-1 1.11.0-4 install ok installed libssl3:amd64 libssl3 3.1.5-1 install ok installed libstdc++6:amd64 libstdc++6 14-20240221-2.1 install ok installed libsystemd0:amd64 libsystemd0 255.3-2 install ok installed libsz2:amd64 libsz2 1.1.2-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.4+20240113-1 install ok installed libtirpc-common libtirpc-common 1.3.4+ds-1 install ok installed libtirpc3:amd64 libtirpc3 1.3.4+ds-1 install ok installed libudev1:amd64 libudev1 255.3-2 install ok installed libunistring5:amd64 libunistring5 1.1-2 install ok installed libuuid1:amd64 libuuid1 2.39.3-6 install ok installed libvulkan1:amd64 libvulkan1 1.3.275.0-1 install ok installed libwacom-common libwacom-common 2.10.0-1 install ok installed libwacom9:amd64 libwacom9 2.10.0-1 install ok installed libwayland-client0:amd64 libwayland-client0 1.22.0-2.1+b1 install ok installed libwayland-server0:amd64 libwayland-server0 1.22.0-2.1+b1 install ok installed libx11-6:amd64 libx11-6 2:1.8.7-1 install ok installed libx11-data libx11-data 2:1.8.7-1 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.8.7-1 install ok installed libxau6:amd64 libxau6 1:1.0.9-1 install ok installed libxcb-dri2-0:amd64 libxcb-dri2-0 1.15-1 install ok installed libxcb-dri3-0:amd64 libxcb-dri3-0 1.15-1 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.15-1 install ok installed libxcb-icccm4:amd64 libxcb-icccm4 0.4.1-1.1+b1 install ok installed libxcb-image0:amd64 libxcb-image0 0.4.0-2+b1 install ok installed libxcb-keysyms1:amd64 libxcb-keysyms1 0.4.0-1+b2 install ok installed libxcb-present0:amd64 libxcb-present0 1.15-1 install ok installed libxcb-randr0:amd64 libxcb-randr0 1.15-1 install ok installed libxcb-render-util0:amd64 libxcb-render-util0 0.3.9-1+b1 install ok installed libxcb-render0:amd64 libxcb-render0 1.15-1 install ok installed libxcb-shape0:amd64 libxcb-shape0 1.15-1 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.15-1 install ok installed libxcb-sync1:amd64 libxcb-sync1 1.15-1 install ok installed libxcb-util1:amd64 libxcb-util1 0.4.0-1+b1 install ok installed libxcb-xfixes0:amd64 libxcb-xfixes0 1.15-1 install ok installed libxcb-xinerama0:amd64 libxcb-xinerama0 1.15-1 install ok installed libxcb-xinput0:amd64 libxcb-xinput0 1.15-1 install ok installed libxcb-xkb1:amd64 libxcb-xkb1 1.15-1 install ok installed libxcb1:amd64 libxcb1 1.15-1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b1 install ok installed libxfixes3:amd64 libxfixes3 1:6.0.0-2 install ok installed libxkbcommon-x11-0:amd64 libxkbcommon-x11-0 1.6.0-1 install ok installed libxkbcommon0:amd64 libxkbcommon0 1.6.0-1 install ok installed libxml2:amd64 libxml2 2.9.14+dfsg-1.3+b2 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1.1 install ok installed libxshmfence1:amd64 libxshmfence1 1.3-1 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.4-1+b2 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libz3-4:amd64 libz3-4 4.8.12-3.1+b2 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-2 install ok installed login login 1:4.13+dfsg1-4 install ok installed logsave logsave 1.47.0-2+b1 install ok installed mawk mawk 1.3.4.20240123-1 install ok installed media-types media-types 10.1.0 install ok installed mount mount 2.39.3-6 install ok installed ncurses-base ncurses-base 6.4+20240113-1 install ok installed ncurses-bin ncurses-bin 6.4+20240113-1 install ok installed netbase netbase 6.4 install ok installed passwd passwd 1:4.13+dfsg1-4 install ok installed perl-base perl-base 5.38.2-3 install ok installed pymol pymol 2.5.0+dfsg-1 install ok installed pymol-data pymol-data 2.5.0+dfsg-1 install ok installed python3 python3 3.11.6-1 install ok installed python3-minimal python3-minimal 3.11.6-1 install ok installed python3-numpy python3-numpy 1:1.24.2-2 install ok installed python3-opengl python3-opengl 3.1.7+dfsg-1 install ok installed python3-pkg-resources python3-pkg-resources 68.1.2-2 install ok installed python3-pymol python3-pymol 2.5.0+dfsg-1+b4 install ok installed python3-pyqt5 python3-pyqt5 5.15.10+dfsg-1 install ok installed python3-pyqt5.qtopengl python3-pyqt5.qtopengl 5.15.10+dfsg-1 install ok installed python3-pyqt5.sip python3-pyqt5.sip 12.13.0-1+b1 install ok installed python3.11 python3.11 3.11.8-1 install ok installed python3.11-minimal python3.11-minimal 3.11.8-1 install ok installed python3.12 python3.12 3.12.2-1 install ok installed python3.12-minimal python3.12-minimal 3.12.2-1 install ok installed readline-common readline-common 8.2-3 install ok installed sed sed 4.9-2 install ok installed shared-mime-info shared-mime-info 2.4-1 install ok installed sysvinit-utils sysvinit-utils 3.08-6 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.39.3-6 install ok installed x11-common x11-common 1:7.7+23 install ok installed xkb-data xkb-data 2.41-2 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg-3+b1 0m59.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m59.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', 'remove', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'libaec0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcups2:amd64', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdbus-1-3:amd64', 'libdouble-conversion3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1:amd64', 'libevdev2:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgbm1:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglew2.2:amd64', 'libglib2.0-0:amd64', 'libglu1-mesa:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgudev-1.0-0:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libice6:amd64', 'libicu72:amd64', 'libinput-bin', 'libinput10:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'libllvm17:amd64', 'libmd4c0:amd64', 'libmtdev1:amd64', 'libncursesw6:amd64', 'libnetcdf19:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libopengl0:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqt5core5a:amd64', 'libqt5dbus5:amd64', 'libqt5designer5:amd64', 'libqt5gui5:amd64', 'libqt5help5:amd64', 'libqt5network5:amd64', 'libqt5opengl5:amd64', 'libqt5printsupport5:amd64', 'libqt5sql5:amd64', 'libqt5test5:amd64', 'libqt5widgets5:amd64', 'libqt5xml5:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'libvulkan1:amd64', 'libwacom-common', 'libwacom9:amd64', 'libwayland-client0:amd64', 'libwayland-server0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-icccm4:amd64', 'libxcb-image0:amd64', 'libxcb-keysyms1:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render-util0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-util1:amd64', 'libxcb-xfixes0:amd64', 'libxcb-xinerama0:amd64', 'libxcb-xinput0:amd64', 'libxcb-xkb1:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxkbcommon-x11-0:amd64', 'libxkbcommon0:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'media-types', 'netbase', 'pymol-data', 'python3', 'python3-minimal', 'python3-numpy', 'python3-opengl', 'python3-pkg-resources', 'python3-pymol', 'python3-pyqt5', 'python3-pyqt5.qtopengl', 'python3-pyqt5.sip', 'python3.11', 'python3.11-minimal', 'python3.12', 'python3.12-minimal', 'readline-common', 'shared-mime-info', 'x11-common', 'xkb-data', 'pymol'] 1m4.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libaec0 libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libbrotli1 libbsd0 libcups2 libcurl3-gnutls libcurl4 libdbus-1-3 libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-mesa0 libegl1 libelf1 libevdev2 libexpat1 libfontconfig1 libfreetype6 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglew2.2 libglib2.0-0 libglu1-mesa libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libgudev-1.0-0 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libice6 libicu72 libinput-bin libinput10 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 libllvm17 libmd4c0 libmtdev1 libncursesw6 libnetcdf19 libnghttp2-14 libnsl2 libopengl0 libpciaccess0 libpcre2-16-0 libpng16-16 libpsl5 libpython3-stdlib libpython3.11 libpython3.11-minimal libpython3.11-stdlib libpython3.12-minimal libpython3.12-stdlib libqt5core5a libqt5dbus5 libqt5designer5 libqt5gui5 libqt5help5 libqt5network5 libqt5opengl5 libqt5printsupport5 libqt5sql5 libqt5test5 libqt5widgets5 libqt5xml5 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsm6 libsqlite3-0 libssh2-1 libsz2 libtirpc-common libtirpc3 libvulkan1 libwacom-common libwacom9 libwayland-client0 libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxdmcp6 libxext6 libxfixes3 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxrender1 libxshmfence1 libxxf86vm1 libz3-4 media-types netbase pymol pymol-data python3 python3-minimal python3-numpy python3-opengl python3-pkg-resources python3-pymol python3-pyqt5 python3-pyqt5.qtopengl python3-pyqt5.sip python3.11 python3.11-minimal python3.12 python3.12-minimal readline-common shared-mime-info x11-common xkb-data 0 upgraded, 0 newly installed, 160 to remove and 0 not upgraded. After this operation, 488 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14055 files and directories currently installed.) Removing pymol (2.5.0+dfsg-1) ... Removing python3-pymol (2.5.0+dfsg-1+b4) ... Removing python3-pyqt5.qtopengl (5.15.10+dfsg-1) ... Removing python3-pyqt5 (5.15.10+dfsg-1) ... Removing libqt5help5:amd64 (5.15.10-6) ... Removing libqt5designer5:amd64 (5.15.10-6) ... Removing libnetcdf19:amd64 (1:4.9.2-3+b1) ... Removing libhdf5-hl-100:amd64 (1.10.10+repack-3+b1) ... Removing libhdf5-103-1:amd64 (1.10.10+repack-3+b1) ... Removing libsz2:amd64 (1.1.2-1) ... Removing libaec0:amd64 (1.1.2-1) ... Removing libqt5printsupport5:amd64 (5.15.10+dfsg-7) ... Removing libcups2:amd64 (2.4.7-1+b1) ... Removing libavahi-client3:amd64 (0.8-13+b1) ... Removing libavahi-common3:amd64 (0.8-13+b1) ... Removing libavahi-common-data:amd64 (0.8-13+b1) ... Removing python3-numpy (1:1.24.2-2) ... Removing liblapack3:amd64 (3.12.0-3) ... Removing libblas3:amd64 (3.12.0-3) ... Removing libcurl4:amd64 (8.6.0-3) ... Removing libcurl3-gnutls:amd64 (8.6.0-3) ... Removing libqt5xml5:amd64 (5.15.10+dfsg-7) ... Removing libqt5opengl5:amd64 (5.15.10+dfsg-7) ... Removing libqt5widgets5:amd64 (5.15.10+dfsg-7) ... Removing libqt5test5:amd64 (5.15.10+dfsg-7) ... Removing python3-opengl (3.1.7+dfsg-1) ... Removing libglew2.2:amd64 (2.2.0-4+b1) ... Removing python3.12 (3.12.2-1) ... Removing python3.12-minimal (3.12.2-1) ... Removing python3-pyqt5.sip (12.13.0-1+b1) ... Removing python3-pkg-resources (68.1.2-2) ... Removing python3 (3.11.6-1) ... Removing python3.11 (3.11.8-1) ... Removing libgfortran5:amd64 (14-20240221-2.1) ... Removing libglu1-mesa:amd64 (9.0.2-1.1) ... Removing libopengl0:amd64 (1.7.0-1) ... Removing libgomp1:amd64 (14-20240221-2.1) ... Removing libpython3.12-stdlib:amd64 (3.12.2-1) ... find: '/usr/lib/python3': No such file or directory Removing libpython3.11:amd64 (3.11.8-1) ... Removing libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Removing libnghttp2-14:amd64 (1.59.0-1) ... Removing libpsl5:amd64 (0.21.2-1+b1) ... Removing libpython3-stdlib:amd64 (3.11.6-1) ... Removing libpython3.12-minimal:amd64 (3.12.2-1) ... find: '/usr/lib/python3': No such file or directory Removing libqt5sql5:amd64 (5.15.10+dfsg-7) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Removing libssh2-1:amd64 (1.11.0-4) ... Removing pymol-data (2.5.0+dfsg-1) ... Removing python3-minimal (3.11.6-1) ... Removing libqt5gui5:amd64 (5.15.10+dfsg-7) ... Removing fontconfig (2.15.0-1) ... Removing libfontconfig1:amd64 (2.15.0-1) ... Removing fontconfig-config (2.15.0-1) ... Removing fonts-dejavu-core (2.37-8) ... Removing fonts-dejavu-mono (2.37-8) ... Removing libharfbuzz0b:amd64 (8.3.0-2) ... Removing libfreetype6:amd64 (2.13.2+dfsg-1+b1) ... Removing libbrotli1:amd64 (1.1.0-2+b3) ... Removing libxcb-icccm4:amd64 (0.4.1-1.1+b1) ... Removing libxcb-render-util0:amd64 (0.3.9-1+b1) ... Removing libsm6:amd64 (2:1.2.3-1) ... Removing libice6:amd64 (2:1.0.10-1) ... Removing libqt5network5:amd64 (5.15.10+dfsg-7) ... Removing libqt5dbus5:amd64 (5.15.10+dfsg-7) ... Removing libdbus-1-3:amd64 (1.14.10-4) ... Removing libqt5core5a:amd64 (5.15.10+dfsg-7) ... Removing libdouble-conversion3:amd64 (3.3.0-1+b1) ... Removing libgl1:amd64 (1.7.0-1) ... Removing libglx0:amd64 (1.7.0-1) ... Removing libglx-mesa0:amd64 (24.0.1-1) ... Removing libgl1-mesa-dri:amd64 (24.0.1-1) ... Removing libdrm-amdgpu1:amd64 (2.4.120-2) ... Removing libegl1:amd64 (1.7.0-1) ... Removing libegl-mesa0:amd64 (24.0.1-1) ... Removing libgbm1:amd64 (24.0.1-1) ... Removing libdrm-intel1:amd64 (2.4.120-2) ... Removing libdrm-nouveau2:amd64 (2.4.120-2) ... Removing libdrm-radeon1:amd64 (2.4.120-2) ... Removing libllvm17:amd64 (1:17.0.6-5) ... Removing libedit2:amd64 (3.1-20230828-1) ... Removing libelf1:amd64 (0.190-1+b1) ... Removing libinput10:amd64 (1.25.0-1) ... Removing libinput-bin (1.25.0-1) ... Removing libwacom9:amd64 (2.10.0-1) ... Removing libevdev2:amd64 (1.13.1+dfsg-1) ... Removing python3.11-minimal (3.11.8-1) ... Removing libexpat1:amd64 (2.6.0-1) ... Removing libglapi-mesa:amd64 (24.0.1-1) ... Removing shared-mime-info (2.4-1) ... Removing libgudev-1.0-0:amd64 (238-3) ... Removing libglib2.0-0:amd64 (2.78.4-1) ... Removing libglvnd0:amd64 (1.7.0-1) ... Removing libgraphite2-3:amd64 (1.3.14-2) ... Removing libpython3.11-stdlib:amd64 (3.11.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libxml2:amd64 (2.9.14+dfsg-1.3+b2) ... Removing libicu72:amd64 (72.1-4+b1) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-2+b2) ... Removing libmd4c0:amd64 (0.4.8-1+b1) ... Removing libmtdev1:amd64 (1.1.6-1+b1) ... Removing libncursesw6:amd64 (6.4+20240113-1) ... Removing libnsl2:amd64 (1.3.0-3) ... Removing libpciaccess0:amd64 (0.17-3) ... Removing libpcre2-16-0:amd64 (10.42-4+b1) ... Removing libpng16-16:amd64 (1.6.43-1) ... Removing libpython3.11-minimal:amd64 (3.11.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8:amd64 (8.2-3+b1) ... Removing libsensors5:amd64 (1:3.6.0-9) ... Removing libsensors-config (1:3.6.0-9) ... Removing libsqlite3-0:amd64 (3.45.1-1) ... Removing libvulkan1:amd64 (1.3.275.0-1) ... Removing libwacom-common (2.10.0-1) ... dpkg: warning: while removing libwacom-common, directory '/usr/lib/udev/rules.d' not empty so not removed Removing libwayland-client0:amd64 (1.22.0-2.1+b1) ... Removing libwayland-server0:amd64 (1.22.0-2.1+b1) ... Removing libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Removing libxrender1:amd64 (1:0.9.10-1.1) ... Removing libx11-xcb1:amd64 (2:1.8.7-1) ... Removing libxcb-dri2-0:amd64 (1.15-1) ... Removing libxcb-dri3-0:amd64 (1.15-1) ... Removing libxcb-glx0:amd64 (1.15-1) ... Removing libxcb-image0:amd64 (0.4.0-2+b1) ... Removing libxcb-keysyms1:amd64 (0.4.0-1+b2) ... Removing libxcb-present0:amd64 (1.15-1) ... Removing libxcb-randr0:amd64 (1.15-1) ... Removing libxcb-render0:amd64 (1.15-1) ... Removing libxcb-shape0:amd64 (1.15-1) ... Removing libxcb-shm0:amd64 (1.15-1) ... Removing libxcb-sync1:amd64 (1.15-1) ... Removing libxcb-util1:amd64 (0.4.0-1+b1) ... Removing libxcb-xfixes0:amd64 (1.15-1) ... Removing libxcb-xinerama0:amd64 (1.15-1) ... Removing libxcb-xinput0:amd64 (1.15-1) ... Removing libxkbcommon-x11-0:amd64 (1.6.0-1) ... Removing libxcb-xkb1:amd64 (1.15-1) ... Removing libxext6:amd64 (2:1.3.4-1+b1) ... Removing libxfixes3:amd64 (1:6.0.0-2) ... Removing libxkbcommon0:amd64 (1.6.0-1) ... Removing libxshmfence1:amd64 (1.3-1) ... Removing libz3-4:amd64 (4.8.12-3.1+b2) ... Removing media-types (10.1.0) ... Removing netbase (6.4) ... Removing readline-common (8.2-3) ... Removing x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing xkb-data (2.41-2) ... Removing libdrm2:amd64 (2.4.120-2) ... Removing libdrm-common (2.4.120-2) ... Removing libtirpc3:amd64 (1.3.4+ds-1) ... Removing libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... Removing libkrb5-3:amd64 (1.20.1-5+b1) ... Removing libk5crypto3:amd64 (1.20.1-5+b1) ... Removing libkeyutils1:amd64 (1.6.3-3) ... Removing libkrb5support0:amd64 (1.20.1-5+b1) ... Removing libtirpc-common (1.3.4+ds-1) ... Removing libx11-6:amd64 (2:1.8.7-1) ... Removing libx11-data (2:1.8.7-1) ... Removing libxcb1:amd64 (1.15-1) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.12.0-1) ... Removing libxau6:amd64 (1:1.0.9-1) ... Processing triggers for libc-bin (2.37-15) ... 1m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', 'remove', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'libaec0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcups2:amd64', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdbus-1-3:amd64', 'libdouble-conversion3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1:amd64', 'libevdev2:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgbm1:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglew2.2:amd64', 'libglib2.0-0:amd64', 'libglu1-mesa:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgudev-1.0-0:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libice6:amd64', 'libicu72:amd64', 'libinput-bin', 'libinput10:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'libllvm17:amd64', 'libmd4c0:amd64', 'libmtdev1:amd64', 'libncursesw6:amd64', 'libnetcdf19:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libopengl0:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqt5core5a:amd64', 'libqt5dbus5:amd64', 'libqt5designer5:amd64', 'libqt5gui5:amd64', 'libqt5help5:amd64', 'libqt5network5:amd64', 'libqt5opengl5:amd64', 'libqt5printsupport5:amd64', 'libqt5sql5:amd64', 'libqt5test5:amd64', 'libqt5widgets5:amd64', 'libqt5xml5:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'libvulkan1:amd64', 'libwacom-common', 'libwacom9:amd64', 'libwayland-client0:amd64', 'libwayland-server0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-icccm4:amd64', 'libxcb-image0:amd64', 'libxcb-keysyms1:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render-util0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-util1:amd64', 'libxcb-xfixes0:amd64', 'libxcb-xinerama0:amd64', 'libxcb-xinput0:amd64', 'libxcb-xkb1:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxkbcommon-x11-0:amd64', 'libxkbcommon0:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'media-types', 'netbase', 'pymol-data', 'python3', 'python3-minimal', 'python3-numpy', 'python3-opengl', 'python3-pkg-resources', 'python3-pymol', 'python3-pyqt5', 'python3-pyqt5.qtopengl', 'python3-pyqt5.sip', 'python3.11', 'python3.11-minimal', 'python3.12', 'python3.12-minimal', 'readline-common', 'shared-mime-info', 'x11-common', 'xkb-data', 'pymol'] 1m4.0s INFO: Running scripts post_remove 1m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_remove_exceptions'] 1m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_remove_exceptions'] 1m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg', '--purge', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'libaec0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcups2:amd64', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdbus-1-3:amd64', 'libdouble-conversion3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1:amd64', 'libevdev2:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgbm1:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglew2.2:amd64', 'libglib2.0-0:amd64', 'libglu1-mesa:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgudev-1.0-0:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libice6:amd64', 'libicu72:amd64', 'libinput-bin', 'libinput10:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'libllvm17:amd64', 'libmd4c0:amd64', 'libmtdev1:amd64', 'libncursesw6:amd64', 'libnetcdf19:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libopengl0:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqt5core5a:amd64', 'libqt5dbus5:amd64', 'libqt5designer5:amd64', 'libqt5gui5:amd64', 'libqt5help5:amd64', 'libqt5network5:amd64', 'libqt5opengl5:amd64', 'libqt5printsupport5:amd64', 'libqt5sql5:amd64', 'libqt5test5:amd64', 'libqt5widgets5:amd64', 'libqt5xml5:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'libvulkan1:amd64', 'libwacom-common', 'libwacom9:amd64', 'libwayland-client0:amd64', 'libwayland-server0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-icccm4:amd64', 'libxcb-image0:amd64', 'libxcb-keysyms1:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render-util0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-util1:amd64', 'libxcb-xfixes0:amd64', 'libxcb-xinerama0:amd64', 'libxcb-xinput0:amd64', 'libxcb-xkb1:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxkbcommon-x11-0:amd64', 'libxkbcommon0:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'media-types', 'netbase', 'pymol-data', 'python3', 'python3-minimal', 'python3-numpy', 'python3-opengl', 'python3-pkg-resources', 'python3-pymol', 'python3-pyqt5', 'python3-pyqt5.qtopengl', 'python3-pyqt5.sip', 'python3.11', 'python3.11-minimal', 'python3.12', 'python3.12-minimal', 'readline-common', 'shared-mime-info', 'x11-common', 'xkb-data'] 1m4.3s DUMP: (Reading database ... 5277 files and directories currently installed.) Purging configuration files for fontconfig (2.15.0-1) ... Purging configuration files for fontconfig-config (2.15.0-1) ... Purging configuration files for fonts-dejavu-core (2.37-8) ... Purging configuration files for fonts-dejavu-mono (2.37-8) ... dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libavahi-client3 which isn't installed dpkg: warning: ignoring request to remove libavahi-common-data which isn't installed dpkg: warning: ignoring request to remove libavahi-common3 which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libcups2 which isn't installed dpkg: warning: ignoring request to remove libcurl3-gnutls which isn't installed dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libdbus-1-3 which isn't installed dpkg: warning: ignoring request to remove libdouble-conversion3 which isn't installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which isn't installed dpkg: warning: ignoring request to remove libdrm-common which isn't installed dpkg: warning: ignoring request to remove libdrm-intel1 which isn't installed dpkg: warning: ignoring request to remove libdrm-nouveau2 which isn't installed dpkg: warning: ignoring request to remove libdrm-radeon1 which isn't installed dpkg: warning: ignoring request to remove libdrm2 which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libegl-mesa0 which isn't installed dpkg: warning: ignoring request to remove libegl1 which isn't installed dpkg: warning: ignoring request to remove libelf1 which isn't installed dpkg: warning: ignoring request to remove libevdev2 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libgbm1 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove libgl1 which isn't installed Purging configuration files for libgl1-mesa-dri:amd64 (24.0.1-1) ... dpkg: warning: ignoring request to remove libglapi-mesa which isn't installed dpkg: warning: ignoring request to remove libglew2.2 which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.78.4-1) ... dpkg: warning: ignoring request to remove libglu1-mesa which isn't installed dpkg: warning: ignoring request to remove libglvnd0 which isn't installed dpkg: warning: ignoring request to remove libglx-mesa0 which isn't installed dpkg: warning: ignoring request to remove libglx0 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... dpkg: warning: ignoring request to remove libgudev-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libhdf5-103-1 which isn't installed dpkg: warning: ignoring request to remove libhdf5-hl-100 which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libinput-bin which isn't installed dpkg: warning: ignoring request to remove libinput10 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove libllvm17 which isn't installed dpkg: warning: ignoring request to remove libmd4c0 which isn't installed dpkg: warning: ignoring request to remove libmtdev1 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnetcdf19 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnsl2 which isn't installed dpkg: warning: ignoring request to remove libopengl0 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libpcre2-16-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3.11 which isn't installed Purging configuration files for libpython3.11-minimal:amd64 (3.11.8-1) ... dpkg: warning: ignoring request to remove libpython3.11-stdlib which isn't installed Purging configuration files for libpython3.12-minimal:amd64 (3.12.2-1) ... dpkg: warning: ignoring request to remove libpython3.12-stdlib which isn't installed dpkg: warning: ignoring request to remove libqt5core5a which isn't installed dpkg: warning: ignoring request to remove libqt5dbus5 which isn't installed dpkg: warning: ignoring request to remove libqt5designer5 which isn't installed dpkg: warning: ignoring request to remove libqt5gui5 which isn't installed dpkg: warning: ignoring request to remove libqt5help5 which isn't installed dpkg: warning: ignoring request to remove libqt5network5 which isn't installed dpkg: warning: ignoring request to remove libqt5opengl5 which isn't installed dpkg: warning: ignoring request to remove libqt5printsupport5 which isn't installed dpkg: warning: ignoring request to remove libqt5sql5 which isn't installed dpkg: warning: ignoring request to remove libqt5test5 which isn't installed dpkg: warning: ignoring request to remove libqt5widgets5 which isn't installed dpkg: warning: ignoring request to remove libqt5xml5 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed Purging configuration files for libsensors-config (1:3.6.0-9) ... dpkg: warning: ignoring request to remove libsensors5 which isn't installed dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed Purging configuration files for libtirpc-common (1.3.4+ds-1) ... dpkg: warning: ignoring request to remove libtirpc3 which isn't installed dpkg: warning: ignoring request to remove libvulkan1 which isn't installed dpkg: warning: ignoring request to remove libwacom-common which isn't installed dpkg: warning: ignoring request to remove libwacom9 which isn't installed dpkg: warning: ignoring request to remove libwayland-client0 which isn't installed dpkg: warning: ignoring request to remove libwayland-server0 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libx11-xcb1 which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri2-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri3-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-glx0 which isn't installed dpkg: warning: ignoring request to remove libxcb-icccm4 which isn't installed dpkg: warning: ignoring request to remove libxcb-image0 which isn't installed dpkg: warning: ignoring request to remove libxcb-keysyms1 which isn't installed dpkg: warning: ignoring request to remove libxcb-present0 which isn't installed dpkg: warning: ignoring request to remove libxcb-randr0 which isn't installed dpkg: warning: ignoring request to remove libxcb-render-util0 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shape0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb-sync1 which isn't installed dpkg: warning: ignoring request to remove libxcb-util1 which isn't installed dpkg: warning: ignoring request to remove libxcb-xfixes0 which isn't installed dpkg: warning: ignoring request to remove libxcb-xinerama0 which isn't installed dpkg: warning: ignoring request to remove libxcb-xinput0 which isn't installed dpkg: warning: ignoring request to remove libxcb-xkb1 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxfixes3 which isn't installed dpkg: warning: ignoring request to remove libxkbcommon-x11-0 which isn't installed dpkg: warning: ignoring request to remove libxkbcommon0 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxshmfence1 which isn't installed dpkg: warning: ignoring request to remove libxxf86vm1 which isn't installed dpkg: warning: ignoring request to remove libz3-4 which isn't installed Purging configuration files for media-types (10.1.0) ... Purging configuration files for netbase (6.4) ... dpkg: warning: ignoring request to remove pymol-data which isn't installed Purging configuration files for python3 (3.11.6-1) ... dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-opengl which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-pymol which isn't installed dpkg: warning: ignoring request to remove python3-pyqt5 which isn't installed dpkg: warning: ignoring request to remove python3-pyqt5.qtopengl which isn't installed dpkg: warning: ignoring request to remove python3-pyqt5.sip which isn't installed dpkg: warning: ignoring request to remove python3.11 which isn't installed Purging configuration files for python3.11-minimal (3.11.8-1) ... dpkg: warning: ignoring request to remove python3.12 which isn't installed Purging configuration files for python3.12-minimal (3.12.2-1) ... Purging configuration files for readline-common (8.2-3) ... Purging configuration files for shared-mime-info (2.4-1) ... Purging configuration files for x11-common (1:7.7+23) ... dpkg: warning: ignoring request to remove xkb-data which isn't installed 1m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg', '--purge', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'libaec0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcups2:amd64', 'libcurl3-gnutls:amd64', 'libcurl4:amd64', 'libdbus-1-3:amd64', 'libdouble-conversion3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1:amd64', 'libevdev2:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libgbm1:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglew2.2:amd64', 'libglib2.0-0:amd64', 'libglu1-mesa:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgudev-1.0-0:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libice6:amd64', 'libicu72:amd64', 'libinput-bin', 'libinput10:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'libllvm17:amd64', 'libmd4c0:amd64', 'libmtdev1:amd64', 'libncursesw6:amd64', 'libnetcdf19:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libopengl0:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqt5core5a:amd64', 'libqt5dbus5:amd64', 'libqt5designer5:amd64', 'libqt5gui5:amd64', 'libqt5help5:amd64', 'libqt5network5:amd64', 'libqt5opengl5:amd64', 'libqt5printsupport5:amd64', 'libqt5sql5:amd64', 'libqt5test5:amd64', 'libqt5widgets5:amd64', 'libqt5xml5:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libsz2:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'libvulkan1:amd64', 'libwacom-common', 'libwacom9:amd64', 'libwayland-client0:amd64', 'libwayland-server0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-icccm4:amd64', 'libxcb-image0:amd64', 'libxcb-keysyms1:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render-util0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-util1:amd64', 'libxcb-xfixes0:amd64', 'libxcb-xinerama0:amd64', 'libxcb-xinput0:amd64', 'libxcb-xkb1:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxkbcommon-x11-0:amd64', 'libxkbcommon0:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'media-types', 'netbase', 'pymol-data', 'python3', 'python3-minimal', 'python3-numpy', 'python3-opengl', 'python3-pkg-resources', 'python3-pymol', 'python3-pyqt5', 'python3-pyqt5.qtopengl', 'python3-pyqt5.sip', 'python3.11', 'python3.11-minimal', 'python3.12', 'python3.12-minimal', 'readline-common', 'shared-mime-info', 'x11-common', 'xkb-data'] 1m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg', '--purge', 'pymol'] 1m4.3s DUMP: dpkg: warning: ignoring request to remove pymol which isn't installed 1m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg', '--purge', 'pymol'] 1m4.3s INFO: Running scripts post_purge 1m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_purge_exceptions'] 1m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_purge_exceptions'] 1m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg', '--purge', '--pending'] 1m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg', '--purge', '--pending'] 1m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg', '--remove', '--pending'] 1m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg', '--remove', '--pending'] 1m4.4s INFO: Running scripts post_test 1m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_test_exceptions'] 1m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'tmp/scripts/post_test_exceptions'] 1m4.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 1m4.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 1m5.1s DEBUG: No broken symlinks as far as we can find. 1m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg-divert', '--list'] 1m5.1s DUMP: local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib 1m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'dpkg-divert', '--list'] 1m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', 'clean'] 1m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp11d5e13a', 'apt-get', 'clean'] 1m5.1s DEBUG: Recording chroot state 1m5.7s INFO: PASS: Installation and purging test. 1m5.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/shm'] 1m6.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/shm'] 1m6.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/console'] 1m6.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/console'] 1m6.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/ptmx'] 1m6.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/ptmx'] 1m6.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/pts'] 1m6.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/dev/pts'] 1m6.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/proc'] 1m6.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp11d5e13a/proc'] 1m6.1s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 1m6.1s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp11d5e13a'] 1m6.1s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp11d5e13a 1m6.2s INFO: PASS: All tests. 1m6.2s INFO: piuparts run ends. ret=0 End: 2024-02-27 10:53:07 GMT