Start: 2024-07-30 07:35:19 GMT Package: r-cran-m2r Version: 1.0.2+dfsg-4 Installed-Size: 440 Maintainer: Debian R Packages Maintainers Architecture: amd64 Depends: macaulay2, net-tools, r-api-4.0, r-cran-mpoly (>= 1.0.5), r-cran-stringr, r-cran-memoise, r-cran-gmp, r-cran-usethis, r-cran-rcpp, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1) Recommends: r-cran-testthat Suggests: r-cran-knitr, r-cran-rmarkdown, r-cran-r.rsp Description: Macaulay2 interface for R Homepage: https://cran.r-project.org/package=m2r Description-md5: e40c1071b1b5fb32cc1567183fe240b8 Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-m2r/r-cran-m2r_1.0.2+dfsg-4_amd64.deb Size: 294036 MD5sum: 0eb82d0a7d56bd32cea1b92d8d9b3867 SHA256: 14767f6e38efc1a4ab5be683dfcb62fe76297494268544a579e24e73d8e1072b Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-no-usr-share-doc --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt r-cran-m2r=1.0.2+dfsg-4 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.2 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-no-usr-share-doc --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt r-cran-m2r=1.0.2+dfsg-4 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-31-amd64 #1 SMP Debian 5.10.221-1 (2024-07-14) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpmhs9blkn 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpmhs9blkn 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/pts'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/pts'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/ptmx'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/console'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/console'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/shm'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/shm'] 0m0.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.4s DEBUG: Created policy-rc.d and chmodded it. 0m0.4s DEBUG: Created resolv.conf. 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpmhs9blkn/tmp/scripts/ 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts-no-usr-share-doc to /srv/piuparts.debian.org/tmp/tmpmhs9blkn/tmp/scripts/ 0m0.4s INFO: Running scripts post_chroot_unpack 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', 'update'] 0m4.5s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [198 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9902 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7248 kB] Fetched 17.3 MB in 3s (5699 kB/s) Reading package lists... 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', 'update'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', '-yf', 'dist-upgrade'] 0m5.7s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: libgcrypt20 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 842 kB of archives. After this operation, 24.6 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libgcrypt20 amd64 1.11.0-5 [842 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 842 kB in 0s (12.4 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5175 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.11.0-5_amd64.deb ... Unpacking libgcrypt20:amd64 (1.11.0-5) over (1.11.0-2) ... Setting up libgcrypt20:amd64 (1.11.0-5) ... Processing triggers for libc-bin (2.39-6) ... 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', '-yf', 'dist-upgrade'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.1s DUMP: d0518d5d5a06a7bf516ca3685584d043 - 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.1s INFO: Running scripts post_setup 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_disable_usr_share_doc'] 0m6.1s DUMP: dpkg-query: no packages found matching systemd-sysv dpkg-query: no packages found matching sysv-rc 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_disable_usr_share_doc'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_dummy_users'] 0m7.2s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_dummy_users'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_forbid_home'] 0m7.2s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_forbid_home'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.3s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_minimize'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_minimize'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_zz_backports'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_setup_zz_backports'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', 'clean'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', 'clean'] 0m7.3s DEBUG: Recording chroot state 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DUMP: install ok installed apt apt 2.9.6 install ok installed base-files base-files 13.3 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.21-2.1 install ok installed bsdutils bsdutils 1:2.40.2-1 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.10 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-2 install ok installed gcc-14-base:amd64 gcc-14-base 14.1.0-5 install ok installed gpgv gpgv 2.2.43-8 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.6 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libblkid1:amd64 libblkid1 2.40.2-1 install ok installed libbsd0:amd64 libbsd0 0.12.2-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5.1 install ok installed libc-bin libc-bin 2.39-6 install ok installed libc6:amd64 libc6 2.39-6 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-1+b1 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.1.0-5 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-5 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.49-2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.5-2+b3 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b4 install ok installed libsepol2:amd64 libsepol2 3.5-2+b1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-1 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.2.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.1.0-5 install ok installed libsystemd0:amd64 libsystemd0 256.4-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.4-2 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.15.3-3 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240622-2 install ok installed mount mount 2.40.2-1 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed passwd passwd 1:4.15.3-3 install ok installed perl-base perl-base 5.38.2-5 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.09-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg-divert', '--list'] 0m7.7s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg-divert', '--list'] 0m7.7s INFO: Running scripts is_testable 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/is_testable_uninstallable'] 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/is_testable_uninstallable'] 0m7.8s INFO: apt-cache does not know about any of the requested packages 0m7.8s INFO: Running scripts pre_test 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_test_exceptions'] 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_test_exceptions'] 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_test_root_password'] 0m7.8s DUMP: New password: Retype new password: passwd: password updated successfully 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_test_root_password'] 0m7.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 0m8.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 0m8.5s DEBUG: No broken symlinks as far as we can find. 0m8.5s INFO: Running scripts pre_install 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_database-server'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_database-server'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_exceptions'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_exceptions'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_extras'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_extras'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 0m8.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 0m9.3s DEBUG: No broken symlinks as far as we can find. 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-cache', 'policy'] 0m10.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-cache', 'policy'] 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-cache', 'policy', 'r-cran-m2r'] 0m10.5s DUMP: r-cran-m2r: Installed: (none) Candidate: 1.0.2+dfsg-4 Version table: 1.0.2+dfsg-4 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-cache', 'policy', 'r-cran-m2r'] 0m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', '-y', 'install', 'r-cran-m2r=1.0.2+dfsg-4'] 0m53.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-glyphicons-halflings fonts-katex gdbmtool libblas3 libboost-stacktrace1.83.0 libbrotli1 libcairo2 libcliquer1 libcurl4t64 libdatrie1 libdeflate0 libeantic3 libexpat1 libflint19 libfontconfig1 libfreetype6 libfribidi0 libfrobby0 libgc1 libgdbm6t64 libgf2x3 libgfortran5 libgit2-1.7 libgivaro9 libglib2.0-0t64 libgmpxx4ldbl libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhttp-parser2.9 libhwloc15 libice6 libicu72 libjbig0 libjpeg62-turbo libjs-bootsidemenu libjs-bootstrap libjs-d3 libjs-jquery libjs-katex libjs-nouislider libjs-three libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 liblerc4 libmathic0v5 libmathicgb0t64 libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmemtailor0 libmpfi0 libmpfr6 libmps3t64 libnauty-2.8.8 libncursesw6 libnghttp2-14 libnormaliz3 libntl44 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libquadmath0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsharpyuv0 libsingular4m4n0 libsm6 libsqlite3-0 libssh2-1t64 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtcmalloc-minimal4t64 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libuv1t64 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6t64 littler macaulay2 macaulay2-common media-types net-tools netbase node-clipboard normaliz normaliz-bin openssl r-base-core r-cran-askpass r-cran-cachem r-cran-cli r-cran-clipr r-cran-colorspace r-cran-cpp11 r-cran-crayon r-cran-credentials r-cran-curl r-cran-desc r-cran-dplyr r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fs r-cran-generics r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-gitcreds r-cran-glue r-cran-gmp r-cran-gtable r-cran-httr2 r-cran-ini r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-memoise r-cran-mgcv r-cran-mpoly r-cran-munsell r-cran-nlme r-cran-openssl r-cran-orthopolynom r-cran-partitions r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-polynom r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-sets r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-usethis r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-whisker r-cran-withr r-cran-yaml r-cran-zip readline-common sensible-utils singular-data ucf unzip x11-common xdg-utils zip Suggested packages: gdbm-l10n low-memory-monitor krb5-doc krb5-user libhwloc-contrib-plugins node-nouislider-doc libmpfi-doc nauty nauty-doc tcl8.6 tk8.6 bergman dot2tex fig2dev graphviz pdf-viewer phcpack polymake r-base qepcad sdpa singular normaliz-doc elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-covr r-cran-knitr r-cran-rmarkdown r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs r-cran-png r-cran-jpeg r-cran-viridis r-cran-testthat r-cran-magick r-cran-sf r-cran-getopt r-cran-r.rsp r-cran-digest r-cran-httr r-cran-bit64 r-cran-dbi r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-survival r-cran-units r-cran-vdiffr r-cran-roxygen2 r-cran-inline r-cran-proxy r-cran-spelling r-cran-bench r-cran-blob r-cran-brio r-cran-callr r-cran-evaluate r-cran-here r-cran-hms r-cran-htmltools r-cran-pkgbuild r-cran-pkgload r-cran-markdown readline-doc singular-doc graphicsmagick-imagemagick-compat | imagemagick Recommended packages: libglib2.0-data shared-mime-info xdg-user-dirs libhwloc-plugins fonts-font-awesome javascript-common krb5-locales libldap-common libgpm2 publicsuffix libsasl2-modules 4ti2 cohomcalg coinor-csdp elpa-macaulay2 gfan info lrslib nauty texlive-latex-base topcom www-browser xterm r-recommended r-base-dev r-doc-html r-cran-testthat r-cran-callr r-cran-covr r-cran-digest r-cran-htmltools r-cran-htmlwidgets r-cran-knitr r-cran-mockery r-cran-processx r-cran-ps r-cran-rmarkdown r-cran-whoami r-cran-bench r-cran-brio r-cran-decor r-cran-lobstr r-cran-progress r-cran-spelling r-cran-later r-cran-httpuv r-cran-webutils r-cran-broom r-cran-dbi r-cran-dbplyr r-cran-rmysql r-cran-rpostgresql r-cran-rsqlite r-cran-unitizer r-cran-pkgload r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite r-cran-vdiffr r-cran-xml2 r-cran-codetools r-cran-waldo r-cran-rmpfr r-cran-docopt r-cran-webfakes r-cran-httr r-cran-r.rsp r-cran-lintr r-cran-tidyverse r-cran-sodium r-cran-lubridate r-cran-abind r-cran-doparallel r-cran-foreach r-cran-iterators r-cran-itertools r-cran-gbrd r-cran-mockr r-cran-bit64 r-cran-dichromat r-cran-hms r-cran-data.table r-cran-formattable r-cran-readr r-cran-magick r-cran-roxygen2 r-cran-pkgdown r-cran-zeallot r-cran-runit singular-ui graphviz surf-alggeo libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: ca-certificates fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-glyphicons-halflings fonts-katex gdbmtool libblas3 libboost-stacktrace1.83.0 libbrotli1 libcairo2 libcliquer1 libcurl4t64 libdatrie1 libdeflate0 libeantic3 libexpat1 libflint19 libfontconfig1 libfreetype6 libfribidi0 libfrobby0 libgc1 libgdbm6t64 libgf2x3 libgfortran5 libgit2-1.7 libgivaro9 libglib2.0-0t64 libgmpxx4ldbl libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhttp-parser2.9 libhwloc15 libice6 libicu72 libjbig0 libjpeg62-turbo libjs-bootsidemenu libjs-bootstrap libjs-d3 libjs-jquery libjs-katex libjs-nouislider libjs-three libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 liblerc4 libmathic0v5 libmathicgb0t64 libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmemtailor0 libmpfi0 libmpfr6 libmps3t64 libnauty-2.8.8 libncursesw6 libnghttp2-14 libnormaliz3 libntl44 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libquadmath0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsharpyuv0 libsingular4m4n0 libsm6 libsqlite3-0 libssh2-1t64 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtcmalloc-minimal4t64 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libuv1t64 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6t64 littler macaulay2 macaulay2-common media-types net-tools netbase node-clipboard normaliz normaliz-bin openssl r-base-core r-cran-askpass r-cran-cachem r-cran-cli r-cran-clipr r-cran-colorspace r-cran-cpp11 r-cran-crayon r-cran-credentials r-cran-curl r-cran-desc r-cran-dplyr r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fs r-cran-generics r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-gitcreds r-cran-glue r-cran-gmp r-cran-gtable r-cran-httr2 r-cran-ini r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-m2r r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-memoise r-cran-mgcv r-cran-mpoly r-cran-munsell r-cran-nlme r-cran-openssl r-cran-orthopolynom r-cran-partitions r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-polynom r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-sets r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-usethis r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-whisker r-cran-withr r-cran-yaml r-cran-zip readline-common sensible-utils singular-data ucf unzip x11-common xdg-utils zip 0 upgraded, 211 newly installed, 0 to remove and 0 not upgraded. Need to get 170 MB of archives. After this operation, 640 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:2 http://deb.debian.org/debian sid/main amd64 readline-common all 8.2-4 [69.3 kB] Get:3 http://deb.debian.org/debian sid/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:4 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.2.2-1 [1364 kB] Get:5 http://deb.debian.org/debian sid/main amd64 ca-certificates all 20240203 [158 kB] Get:6 http://deb.debian.org/debian sid/main amd64 media-types all 10.1.0 [26.9 kB] Get:7 http://deb.debian.org/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libpng16-16t64 amd64 1.6.43-5 [278 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libfreetype6 amd64 2.13.2+dfsg-1+b4 [439 kB] Get:12 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:13 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:14 http://deb.debian.org/debian sid/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get:16 http://deb.debian.org/debian sid/main amd64 fontconfig amd64 2.15.0-1.1 [463 kB] Get:17 http://deb.debian.org/debian sid/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get:18 http://deb.debian.org/debian sid/main amd64 fonts-katex all 0.16.10+~cs6.1.0-2 [778 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libgdbm6t64 amd64 1.23-6 [72.8 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get:21 http://deb.debian.org/debian sid/main amd64 gdbmtool amd64 1.23-6 [113 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libboost-stacktrace1.83.0 amd64 1.83.0-3+b2 [280 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get:30 http://deb.debian.org/debian sid/main amd64 libxcb-render0 amd64 1.17.0-2 [115 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libxcb-shm0 amd64 1.17.0-2 [105 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libcairo2 amd64 1.18.0-3+b1 [531 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libcliquer1 amd64 1.21-3+b1 [31.6 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:39 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-2 [186 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.62.1-2 [74.9 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:46 http://deb.debian.org/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libssh2-1t64 amd64 1.11.0-6 [216 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libcurl4t64 amd64 8.9.0-3 [462 kB] Get:49 http://deb.debian.org/debian sid/main amd64 libdatrie1 amd64 0.2.13-3 [37.7 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libdeflate0 amd64 1.20-1 [46.0 kB] Get:51 http://deb.debian.org/debian sid/main amd64 libmpfr6 amd64 4.2.1-1+b1 [714 kB] Get:52 http://deb.debian.org/debian sid/main amd64 libflint19 amd64 3.1.3-1 [3766 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libeantic3 amd64 2.0.2+ds-2 [65.0 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-2+b1 [329 kB] Get:56 http://deb.debian.org/debian sid/main amd64 libfrobby0 amd64 0.9.5-4+b1 [432 kB] Get:57 http://deb.debian.org/debian sid/main amd64 libgc1 amd64 1:8.2.6-2 [245 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libgf2x3 amd64 1.3.0-2+b1 [51.5 kB] Get:59 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14.1.0-5 [836 kB] Get:60 http://deb.debian.org/debian sid/main amd64 libhttp-parser2.9 amd64 2.9.4-6+b1 [21.0 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libmbedcrypto7t64 amd64 2.28.8-1 [284 kB] Get:62 http://deb.debian.org/debian sid/main amd64 libmbedx509-1t64 amd64 2.28.8-1 [131 kB] Get:63 http://deb.debian.org/debian sid/main amd64 libmbedtls14t64 amd64 2.28.8-1 [167 kB] Get:64 http://deb.debian.org/debian sid/main amd64 libgit2-1.7 amd64 1.7.2+ds-1+b2 [518 kB] Get:65 http://deb.debian.org/debian sid/main amd64 libgivaro9 amd64 4.2.0-5 [77.6 kB] Get:66 http://deb.debian.org/debian sid/main amd64 libglib2.0-0t64 amd64 2.80.4-1 [1486 kB] Get:67 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 14.1.0-5 [137 kB] Get:68 http://deb.debian.org/debian sid/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get:69 http://deb.debian.org/debian sid/main amd64 libharfbuzz0b amd64 8.3.0-2+b1 [2214 kB] Get:70 http://deb.debian.org/debian sid/main amd64 libhwloc15 amd64 2.11.0-2 [162 kB] Get:71 http://deb.debian.org/debian sid/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get:72 http://deb.debian.org/debian sid/main amd64 libice6 amd64 2:1.0.10-1+b1 [56.7 kB] Get:73 http://deb.debian.org/debian sid/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:74 http://deb.debian.org/debian sid/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get:75 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:76 http://deb.debian.org/debian sid/main amd64 libjs-bootsidemenu all 1.0.0-3 [54.4 kB] Get:77 http://deb.debian.org/debian sid/main amd64 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get:78 http://deb.debian.org/debian sid/main amd64 libjs-d3 all 3.5.17-4 [132 kB] Get:79 http://deb.debian.org/debian sid/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:80 http://deb.debian.org/debian sid/main amd64 libjs-katex all 0.16.10+~cs6.1.0-2 [231 kB] Get:81 http://deb.debian.org/debian sid/main amd64 libjs-nouislider all 15.8.1+ds-1 [49.1 kB] Get:82 http://deb.debian.org/debian sid/main amd64 libjs-three all 111+dfsg1-3 [1239 kB] Get:83 http://deb.debian.org/debian sid/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get:84 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get:85 http://deb.debian.org/debian sid/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get:86 http://deb.debian.org/debian sid/main amd64 libmathic0v5 amd64 1.0~git20230916-1+b1 [41.1 kB] Get:87 http://deb.debian.org/debian sid/main amd64 libmemtailor0 amd64 1.0~git20230916-1 [7400 B] Get:88 http://deb.debian.org/debian sid/main amd64 libtbbmalloc2 amd64 2021.12.0-1 [48.9 kB] Get:89 http://deb.debian.org/debian sid/main amd64 libtbbbind-2-5 amd64 2021.12.0-1 [14.4 kB] Get:90 http://deb.debian.org/debian sid/main amd64 libtbb12 amd64 2021.12.0-1 [87.8 kB] Get:91 http://deb.debian.org/debian sid/main amd64 libmathicgb0t64 amd64 1.0~git20240206-1.1 [285 kB] Get:92 http://deb.debian.org/debian sid/main amd64 libmpfi0 amd64 1.5.4+ds-3 [35.1 kB] Get:93 http://deb.debian.org/debian sid/main amd64 libtcmalloc-minimal4t64 amd64 2.15-3 [85.8 kB] Get:94 http://deb.debian.org/debian sid/main amd64 libmps3t64 amd64 3.2.1-10.1+b1 [169 kB] Get:95 http://deb.debian.org/debian sid/main amd64 libnauty-2.8.8 amd64 2.8.8+ds-5 [745 kB] Get:96 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.5-2 [135 kB] Get:97 http://deb.debian.org/debian sid/main amd64 libnormaliz3 amd64 3.10.3+ds-1 [1933 kB] Get:98 http://deb.debian.org/debian sid/main amd64 libntl44 amd64 11.5.1-1+b2 [834 kB] Get:99 http://deb.debian.org/debian sid/main amd64 libthai-data all 0.1.29-2 [168 kB] Get:100 http://deb.debian.org/debian sid/main amd64 libthai0 amd64 0.1.29-2 [49.1 kB] Get:101 http://deb.debian.org/debian sid/main amd64 libpango-1.0-0 amd64 1.54.0+ds-1 [219 kB] Get:102 http://deb.debian.org/debian sid/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-1 [48.0 kB] Get:103 http://deb.debian.org/debian sid/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-1 [35.0 kB] Get:104 http://deb.debian.org/debian sid/main amd64 libpaper1 amd64 1.1.29+b1 [12.9 kB] Get:105 http://deb.debian.org/debian sid/main amd64 libpaper-utils amd64 1.1.29+b1 [9176 B] Get:106 http://deb.debian.org/debian sid/main amd64 libpython3.12-minimal amd64 3.12.4-3 [812 kB] Get:107 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.46.0-1 [902 kB] Get:108 http://deb.debian.org/debian sid/main amd64 libpython3.12-stdlib amd64 3.12.4-3 [1950 kB] Get:109 http://deb.debian.org/debian sid/main amd64 libpython3.12t64 amd64 3.12.4-3 [2114 kB] Get:110 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 14.1.0-5 [145 kB] Get:111 http://deb.debian.org/debian sid/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get:112 http://deb.debian.org/debian sid/main amd64 libsingular4m4n0 amd64 1:4.4.0-p3+ds-1 [2781 kB] Get:113 http://deb.debian.org/debian sid/main amd64 libsm6 amd64 2:1.2.3-1+b1 [33.6 kB] Get:114 http://deb.debian.org/debian sid/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1 [1034 kB] Get:115 http://deb.debian.org/debian sid/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get:116 http://deb.debian.org/debian sid/main amd64 libtiff6 amd64 4.5.1+git230720-4 [322 kB] Get:117 http://deb.debian.org/debian sid/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get:118 http://deb.debian.org/debian sid/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3 [82.7 kB] Get:119 http://deb.debian.org/debian sid/main amd64 libxft2 amd64 2.3.6-1+b1 [54.2 kB] Get:120 http://deb.debian.org/debian sid/main amd64 libxss1 amd64 1:1.2.3-1+b1 [17.0 kB] Get:121 http://deb.debian.org/debian sid/main amd64 libtk8.6 amd64 8.6.14-1 [784 kB] Get:122 http://deb.debian.org/debian sid/main amd64 libuv1t64 amd64 1.48.0-5 [148 kB] Get:123 http://deb.debian.org/debian sid/main amd64 libxml2 amd64 2.12.7+dfsg-3+b1 [671 kB] Get:124 http://deb.debian.org/debian sid/main amd64 libxt6t64 amd64 1:1.2.1-1.2 [187 kB] Get:125 http://deb.debian.org/debian sid/main amd64 zip amd64 3.0-14 [233 kB] Get:126 http://deb.debian.org/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:127 http://deb.debian.org/debian sid/main amd64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get:128 http://deb.debian.org/debian sid/main amd64 r-base-core amd64 4.4.1-1 [28.3 MB] Get:129 http://deb.debian.org/debian sid/main amd64 r-cran-littler amd64 0.3.20-1 [102 kB] Get:130 http://deb.debian.org/debian sid/main amd64 littler all 0.3.20-1 [16.0 kB] Get:131 http://deb.debian.org/debian sid/main amd64 node-clipboard all 2.0.11+ds+~cs9.6.11-1 [21.0 kB] Get:132 http://deb.debian.org/debian sid/main amd64 macaulay2-common all 1.24.05+ds-4 [29.6 MB] Get:133 http://deb.debian.org/debian sid/main amd64 normaliz-bin amd64 3.10.3+ds-1 [47.8 kB] Get:134 http://deb.debian.org/debian sid/main amd64 normaliz all 3.10.3+ds-1 [8764 B] Get:135 http://deb.debian.org/debian sid/main amd64 singular-data all 1:4.4.0-p3+ds-1 [4767 kB] Get:136 http://deb.debian.org/debian sid/main amd64 macaulay2 amd64 1.24.05+ds-4 [2566 kB] Get:137 http://deb.debian.org/debian sid/main amd64 net-tools amd64 2.10-1.1 [243 kB] Get:138 http://deb.debian.org/debian sid/main amd64 r-cran-sys amd64 3.4.2-1 [43.7 kB] Get:139 http://deb.debian.org/debian sid/main amd64 r-cran-askpass amd64 1.2.0-1 [24.0 kB] Get:140 http://deb.debian.org/debian sid/main amd64 r-cran-rlang amd64 1.1.4-1 [1712 kB] Get:141 http://deb.debian.org/debian sid/main amd64 r-cran-fastmap amd64 1.1.1-1 [68.9 kB] Get:142 http://deb.debian.org/debian sid/main amd64 r-cran-cachem amd64 1.0.8-1 [72.0 kB] Get:143 http://deb.debian.org/debian sid/main amd64 r-cran-cli amd64 3.6.2-1 [1325 kB] Get:144 http://deb.debian.org/debian sid/main amd64 r-cran-clipr all 0.8.0-1 [53.0 kB] Get:145 http://deb.debian.org/debian sid/main amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1692 kB] Get:146 http://deb.debian.org/debian sid/main amd64 r-cran-cpp11 all 0.4.7-1 [219 kB] Get:147 http://deb.debian.org/debian sid/main amd64 r-cran-crayon all 1.5.2-1 [165 kB] Get:148 http://deb.debian.org/debian sid/main amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [401 kB] Get:149 http://deb.debian.org/debian sid/main amd64 r-cran-curl amd64 5.2.1+dfsg-1 [178 kB] Get:150 http://deb.debian.org/debian sid/main amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [443 kB] Get:151 http://deb.debian.org/debian sid/main amd64 r-cran-credentials all 2.0.1-1 [216 kB] Get:152 http://deb.debian.org/debian sid/main amd64 r-cran-r6 all 2.5.1-1 [105 kB] Get:153 http://deb.debian.org/debian sid/main amd64 r-cran-desc all 1.4.3-1 [351 kB] Get:154 http://deb.debian.org/debian sid/main amd64 r-cran-generics all 0.1.3-1 [81.4 kB] Get:155 http://deb.debian.org/debian sid/main amd64 r-cran-glue amd64 1.7.0-1 [157 kB] Get:156 http://deb.debian.org/debian sid/main amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] Get:157 http://deb.debian.org/debian sid/main amd64 r-cran-magrittr amd64 2.0.3-1 [201 kB] Get:158 http://deb.debian.org/debian sid/main amd64 r-cran-fansi amd64 1.0.5-1 [621 kB] Get:159 http://deb.debian.org/debian sid/main amd64 r-cran-utf8 amd64 1.2.4-1 [133 kB] Get:160 http://deb.debian.org/debian sid/main amd64 r-cran-vctrs amd64 0.6.5-1 [1375 kB] Get:161 http://deb.debian.org/debian sid/main amd64 r-cran-pillar all 1.9.0+dfsg-1 [463 kB] Get:162 http://deb.debian.org/debian sid/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get:163 http://deb.debian.org/debian sid/main amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [420 kB] Get:164 http://deb.debian.org/debian sid/main amd64 r-cran-withr all 3.0.0+dfsg-1 [240 kB] Get:165 http://deb.debian.org/debian sid/main amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [223 kB] Get:166 http://deb.debian.org/debian sid/main amd64 r-cran-dplyr amd64 1.1.4-1 [1524 kB] Get:167 http://deb.debian.org/debian sid/main amd64 r-cran-farver amd64 2.1.2-1 [1411 kB] Get:168 http://deb.debian.org/debian sid/main amd64 r-cran-fs amd64 1.6.4+dfsg-1 [247 kB] Get:169 http://deb.debian.org/debian sid/main amd64 r-cran-rstudioapi all 0.16.0-1 [292 kB] Get:170 http://deb.debian.org/debian sid/main amd64 r-cran-zip amd64 2.3.1-1 [118 kB] Get:171 http://deb.debian.org/debian sid/main amd64 r-cran-gert amd64 2.0.1+dfsg-1 [244 kB] Get:172 http://deb.debian.org/debian sid/main amd64 r-cran-gtable all 0.3.5+dfsg-1 [222 kB] Get:173 http://deb.debian.org/debian sid/main amd64 r-cran-isoband amd64 0.2.7-1 [1614 kB] Get:174 http://deb.debian.org/debian sid/main amd64 r-cran-mass amd64 7.3-61-1 [1112 kB] Get:175 http://deb.debian.org/debian sid/main amd64 r-cran-lattice amd64 0.22-6-1 [1392 kB] Get:176 http://deb.debian.org/debian sid/main amd64 r-cran-nlme amd64 3.1.165-1 [2325 kB] Get:177 http://deb.debian.org/debian sid/main amd64 r-cran-matrix amd64 1.7-0-3 [4127 kB] Get:178 http://deb.debian.org/debian sid/main amd64 r-cran-mgcv amd64 1.9-1-1 [3233 kB] Get:179 http://deb.debian.org/debian sid/main amd64 r-cran-labeling all 0.4.3-1 [62.4 kB] Get:180 http://deb.debian.org/debian sid/main amd64 r-cran-munsell all 0.5.1-1 [237 kB] Get:181 http://deb.debian.org/debian sid/main amd64 r-cran-rcolorbrewer all 1.1-3-1 [54.7 kB] Get:182 http://deb.debian.org/debian sid/main amd64 r-cran-viridislite all 0.4.2-2 [1299 kB] Get:183 http://deb.debian.org/debian sid/main amd64 r-cran-scales all 1.3.0-1 [677 kB] Get:184 http://deb.debian.org/debian sid/main amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3933 kB] Get:185 http://deb.debian.org/debian sid/main amd64 r-cran-gitcreds all 0.1.2-1 [92.7 kB] Get:186 http://deb.debian.org/debian sid/main amd64 r-cran-rappdirs amd64 0.3.3-1 [47.4 kB] Get:187 http://deb.debian.org/debian sid/main amd64 r-cran-httr2 all 1.0.2-1 [582 kB] Get:188 http://deb.debian.org/debian sid/main amd64 r-cran-ini all 0.3.1-2 [15.6 kB] Get:189 http://deb.debian.org/debian sid/main amd64 r-cran-gh all 1.4.1-1 [126 kB] Get:190 http://deb.debian.org/debian sid/main amd64 r-cran-gmp amd64 0.7-4-1 [301 kB] Get:191 http://deb.debian.org/debian sid/main amd64 r-cran-stringi amd64 1.8.3-1 [861 kB] Get:192 http://deb.debian.org/debian sid/main amd64 r-cran-stringr all 1.5.1-1 [296 kB] Get:193 http://deb.debian.org/debian sid/main amd64 r-cran-polynom all 1.4-1+dfsg-1 [92.5 kB] Get:194 http://deb.debian.org/debian sid/main amd64 r-cran-sets amd64 1.0.25+ds-1 [716 kB] Get:195 http://deb.debian.org/debian sid/main amd64 r-cran-mathjaxr all 1.6-0-1 [604 kB] Get:196 http://deb.debian.org/debian sid/main amd64 r-cran-rbibutils amd64 2.2.16-1 [675 kB] Get:197 http://deb.debian.org/debian sid/main amd64 r-cran-rdpack all 2.6-1 [745 kB] Get:198 http://deb.debian.org/debian sid/main amd64 r-cran-partitions amd64 1.10-7+ds-1 [978 kB] Get:199 http://deb.debian.org/debian sid/main amd64 r-cran-pkgkitten all 0.2.3-1 [26.7 kB] Get:200 http://deb.debian.org/debian sid/main amd64 r-cran-rcpp amd64 1.0.13-1 [2082 kB] Get:201 http://deb.debian.org/debian sid/main amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] Get:202 http://deb.debian.org/debian sid/main amd64 r-cran-orthopolynom all 1.0.6.1-1 [332 kB] Get:203 http://deb.debian.org/debian sid/main amd64 r-cran-purrr amd64 1.0.2-1 [507 kB] Get:204 http://deb.debian.org/debian sid/main amd64 r-cran-tidyr amd64 1.3.1-1 [1163 kB] Get:205 http://deb.debian.org/debian sid/main amd64 r-cran-mpoly all 1.1.1-2 [208 kB] Get:206 http://deb.debian.org/debian sid/main amd64 r-cran-memoise all 2.0.1-1 [53.8 kB] Get:207 http://deb.debian.org/debian sid/main amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] Get:208 http://deb.debian.org/debian sid/main amd64 r-cran-whisker all 0.4.1-1 [62.3 kB] Get:209 http://deb.debian.org/debian sid/main amd64 r-cran-yaml amd64 2.3.8-2 [107 kB] Get:210 http://deb.debian.org/debian sid/main amd64 r-cran-usethis all 2.2.3-1 [903 kB] Get:211 http://deb.debian.org/debian sid/main amd64 r-cran-m2r amd64 1.0.2+dfsg-4 [294 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 170 MB in 17s (9839 kB/s) Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5179 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../003-openssl_3.2.2-1_amd64.deb ... Unpacking openssl (3.2.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../004-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package media-types. Preparing to unpack .../005-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package ucf. Preparing to unpack .../006-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../007-libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../008-libbrotli1_1.1.0-2+b4_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b4) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../009-libpng16-16t64_1.6.43-5_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.43-5) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../010-libfreetype6_2.13.2+dfsg-1+b4_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.2+dfsg-1+b4) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../011-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../012-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../013-fontconfig-config_2.15.0-1.1_amd64.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../014-libfontconfig1_2.15.0-1.1_amd64.deb ... Unpacking libfontconfig1:amd64 (2.15.0-1.1) ... Selecting previously unselected package fontconfig. Preparing to unpack .../015-fontconfig_2.15.0-1.1_amd64.deb ... Unpacking fontconfig (2.15.0-1.1) ... Selecting previously unselected package fonts-glyphicons-halflings. Preparing to unpack .../016-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Selecting previously unselected package fonts-katex. Preparing to unpack .../017-fonts-katex_0.16.10+~cs6.1.0-2_all.deb ... Unpacking fonts-katex (0.16.10+~cs6.1.0-2) ... Selecting previously unselected package libgdbm6t64:amd64. Preparing to unpack .../018-libgdbm6t64_1.23-6_amd64.deb ... Unpacking libgdbm6t64:amd64 (1.23-6) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../019-libreadline8t64_8.2-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package gdbmtool. Preparing to unpack .../020-gdbmtool_1.23-6_amd64.deb ... Unpacking gdbmtool (1.23-6) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../021-libblas3_3.12.0-3_amd64.deb ... Unpacking libblas3:amd64 (3.12.0-3) ... Selecting previously unselected package libboost-stacktrace1.83.0:amd64. 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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../118-libxft2_2.3.6-1+b1_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1+b1) ... Selecting previously unselected package libxss1:amd64. Preparing to unpack .../119-libxss1_1%3a1.2.3-1+b1_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1+b1) ... Selecting previously unselected package libtk8.6:amd64. Preparing to unpack .../120-libtk8.6_8.6.14-1_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.14-1) ... Selecting previously unselected package libuv1t64:amd64. Preparing to unpack .../121-libuv1t64_1.48.0-5_amd64.deb ... Unpacking libuv1t64:amd64 (1.48.0-5) ... Selecting previously unselected package libxml2:amd64. 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Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libmbedx509-1t64:amd64 (2.28.8-1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-2) ... Setting up libmps3t64:amd64 (3.2.1-10.1+b1) ... Setting up libtbbbind-2-5:amd64 (2021.12.0-1) ... Setting up libgivaro9:amd64 (4.2.0-5) ... Setting up libeantic3:amd64 (2.0.2+ds-2) ... Setting up libthai0:amd64 (0.1.29-2) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libfreetype6:amd64 (2.13.2+dfsg-1+b4) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libnormaliz3:amd64 (3.10.3+ds-1) ... Setting up ucf (3.0043+nmu1) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up libmbedtls14t64:amd64 (2.28.8-1) ... Setting up libgit2-1.7:amd64 (1.7.2+ds-1+b2) ... Setting up libharfbuzz0b:amd64 (8.3.0-2+b1) ... Setting up libxss1:amd64 (1:1.2.3-1+b1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up libsm6:amd64 (2:1.2.3-1+b1) ... Setting up macaulay2-common (1.24.05+ds-4) ... Setting up libpaper1:amd64 (1.1.29+b1) ... Creating config file /etc/papersize with new version Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.6-1+b1) ... Setting up libpython3.12-stdlib:amd64 (3.12.4-3) ... Setting up libcurl4t64:amd64 (8.9.0-3) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Setting up libtk8.6:amd64 (8.6.14-1) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-1) ... Setting up libtbb12:amd64 (2021.12.0-1) ... Setting up libpaper-utils (1.1.29+b1) ... Setting up normaliz-bin (3.10.3+ds-1) ... Setting up libcairo2:amd64 (1.18.0-3+b1) ... Setting up libpython3.12t64:amd64 (3.12.4-3) ... Setting up gdbmtool (1.23-6) ... Setting up libsingular4m4n0:amd64 (1:4.4.0-p3+ds-1) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2) ... Setting up normaliz (3.10.3+ds-1) ... Setting up libmathicgb0t64:amd64 (1.0~git20240206-1.1) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ... Setting up macaulay2 (1.24.05+ds-4) ... Loading Macaulay2 package documentation databases ... Setting up r-base-core (4.4.1-1) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.5.2-1) ... Setting up r-cran-labeling (0.4.3-1) ... Setting up r-cran-lattice (0.22-6-1) ... Setting up r-cran-nlme (3.1.165-1) ... Setting up r-cran-farver (2.1.2-1) ... Setting up r-cran-zip (2.3.1-1) ... Setting up r-cran-whisker (0.4.1-1) ... Setting up r-cran-viridislite (0.4.2-2) ... Setting up r-cran-clipr (0.8.0-1) ... Setting up r-cran-polynom (1.4-1+dfsg-1) ... Setting up r-cran-r6 (2.5.1-1) ... Setting up r-cran-pkgkitten (0.2.3-1) ... Setting up r-cran-magrittr (2.0.3-1) ... Setting up r-cran-rappdirs (0.3.3-1) ... Setting up r-cran-littler (0.3.20-1) ... Setting up r-cran-fs (1.6.4+dfsg-1) ... Setting up r-cran-rcpp (1.0.13-1) ... Setting up r-cran-curl (5.2.1+dfsg-1) ... Setting up r-cran-rlang (1.1.4-1) ... Setting up r-cran-sets (1.0.25+ds-1) ... Setting up littler (0.3.20-1) ... Setting up r-cran-sys (3.4.2-1) ... Setting up r-cran-withr (3.0.0+dfsg-1) ... Setting up r-cran-mathjaxr (1.6-0-1) ... Setting up r-cran-gmp (0.7-4-1) ... Setting up r-cran-generics (0.1.3-1) ... Setting up r-cran-yaml (2.3.8-2) ... Setting up r-cran-fansi (1.0.5-1) ... Setting up r-cran-mass (7.3-61-1) ... Setting up r-cran-glue (1.7.0-1) ... Setting up r-cran-orthopolynom (1.0.6.1-1) ... Setting up r-cran-cli (3.6.2-1) ... Setting up r-cran-rbibutils (2.2.16-1) ... Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... Setting up r-cran-rprojroot (2.0.4-1) ... Setting up r-cran-askpass (1.2.0-1) ... Setting up r-cran-fastmap (1.1.1-1) ... Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... Setting up r-cran-rstudioapi (0.16.0-1) ... Setting up r-cran-pkgconfig (2.0.3-2) ... Setting up r-cran-utf8 (1.2.4-1) ... Setting up r-cran-colorspace (2.1-0+dfsg-1) ... Setting up r-cran-stringi (1.8.3-1) ... Setting up r-cran-gitcreds (0.1.2-1) ... Setting up r-cran-cpp11 (0.4.7-1) ... Setting up r-cran-plyr (1.8.9-1) ... Setting up r-cran-rcolorbrewer (1.1-3-1) ... Setting up r-cran-ini (0.3.1-2) ... Setting up r-cran-isoband (0.2.7-1) ... Setting up r-cran-gtable (0.3.5+dfsg-1) ... Setting up r-cran-matrix (1.7-0-3) ... Setting up r-cran-mgcv (1.9-1-1) ... Setting up r-cran-cachem (1.0.8-1) ... Setting up r-cran-vctrs (0.6.5-1) ... Setting up r-cran-pillar (1.9.0+dfsg-1) ... Setting up r-cran-openssl (2.2.0+dfsg-1) ... Setting up r-cran-stringr (1.5.1-1) ... Setting up r-cran-desc (1.4.3-1) ... Setting up r-cran-munsell (0.5.1-1) ... Setting up r-cran-tibble (3.2.1+dfsg-2) ... Setting up r-cran-rdpack (2.6-1) ... Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... Setting up r-cran-httr2 (1.0.2-1) ... Setting up r-cran-scales (1.3.0-1) ... Setting up r-cran-memoise (2.0.1-1) ... Setting up r-cran-purrr (1.0.2-1) ... Setting up r-cran-credentials (2.0.1-1) ... Setting up r-cran-dplyr (1.1.4-1) ... Setting up r-cran-gh (1.4.1-1) ... Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... Setting up r-cran-gert (2.0.1+dfsg-1) ... Setting up r-cran-partitions (1.10-7+ds-1) ... Setting up r-cran-tidyr (1.3.1-1) ... Setting up r-cran-usethis (2.2.3-1) ... Setting up r-cran-mpoly (1.1.1-2) ... Setting up r-cran-m2r (1.0.2+dfsg-4) ... Processing triggers for libc-bin (2.39-6) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m53.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', '-y', 'install', 'r-cran-m2r=1.0.2+dfsg-4'] 0m53.9s INFO: Running scripts post_install 0m53.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_install_exceptions'] 0m53.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_install_exceptions'] 0m54.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 0m54.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 0m56.2s ERROR: WARN: Broken symlinks: /usr/share/nodejs/clipboard/demo -> ../../doc/node-clipboard/demo (node-clipboard) /usr/share/doc/Macaulay2/WeylAlgebras/html/.Headline -> ../../Dmodules/html/.Headline (macaulay2-common) /usr/share/doc/Macaulay2/Visualize/example-output/_open__Port.out -> _close__Port.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/html/.Headline -> ../../OldToricVectorBundles/html/.Headline (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/html/.Certification -> ../../OldToricVectorBundles/html/.Certification (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_twist.out -> ../../OldToricVectorBundles/example-output/_twist.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_toric__Vector__Bundle_lp__Z__Z_cm__Fan_cm__List_cm__List_rp.out -> ../../OldToricVectorBundles/example-output/_toric__Vector__Bundle_lp__Z__Z_cm__Fan_cm__List_cm__List_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_toric__Vector__Bundle.out -> ../../OldToricVectorBundles/example-output/_toric__Vector__Bundle.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_tensor_lp__Toric__Vector__Bundle_cm__Toric__Vector__Bundle_rp.out -> ../../OldToricVectorBundles/example-output/_tensor_lp__Toric__Vector__Bundle_cm__Toric__Vector__Bundle_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_symmetric__Power_lp__Z__Z_cm__Toric__Vector__Bundle_rp.out -> ../../OldToricVectorBundles/example-output/_symmetric__Power_lp__Z__Z_cm__Toric__Vector__Bundle_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_ring_lp__Toric__Vector__Bundle_rp.out -> ../../OldToricVectorBundles/example-output/_ring_lp__Toric__Vector__Bundle_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_reg__Check.out -> ../../OldToricVectorBundles/example-output/_reg__Check.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_rays_lp__Toric__Vector__Bundle_rp.out -> ../../OldToricVectorBundles/example-output/_rays_lp__Toric__Vector__Bundle_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_rank_lp__Toric__Vector__Bundle_rp.out -> ../../OldToricVectorBundles/example-output/_rank_lp__Toric__Vector__Bundle_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_random__Deformation.out -> ../../OldToricVectorBundles/example-output/_random__Deformation.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_net_lp__Toric__Vector__Bundle__Klyachko_rp.out -> ../../OldToricVectorBundles/example-output/_net_lp__Toric__Vector__Bundle__Klyachko_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_net_lp__Toric__Vector__Bundle__Kaneyama_rp.out -> ../../OldToricVectorBundles/example-output/_net_lp__Toric__Vector__Bundle__Kaneyama_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_kernel_lp__Toric__Vector__Bundle__Klyachko_cm__Matrix_rp.out -> ../../OldToricVectorBundles/example-output/_kernel_lp__Toric__Vector__Bundle__Klyachko_cm__Matrix_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_is__Vector__Bundle.out -> ../../OldToricVectorBundles/example-output/_is__Vector__Bundle.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_is__General.out -> ../../OldToricVectorBundles/example-output/_is__General.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_image_lp__Toric__Vector__Bundle__Klyachko_cm__Matrix_rp.out -> ../../OldToricVectorBundles/example-output/_image_lp__Toric__Vector__Bundle__Klyachko_cm__Matrix_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_hh^__Z__Z_sp__Toric__Vector__Bundle.out -> ../../OldToricVectorBundles/example-output/_hh^__Z__Z_sp__Toric__Vector__Bundle.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_find__Weights.out -> ../../OldToricVectorBundles/example-output/_find__Weights.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_filtration.out -> ../../OldToricVectorBundles/example-output/_filtration.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_exterior__Power_lp__Z__Z_cm__Toric__Vector__Bundle_rp.out -> ../../OldToricVectorBundles/example-output/_exterior__Power_lp__Z__Z_cm__Toric__Vector__Bundle_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_exists__Decomposition.out -> ../../OldToricVectorBundles/example-output/_exists__Decomposition.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_euler__Chi.out -> ../../OldToricVectorBundles/example-output/_euler__Chi.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_details.out -> ../../OldToricVectorBundles/example-output/_details.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_cokernel_lp__Toric__Vector__Bundle__Klyachko_cm__Matrix_rp.out -> ../../OldToricVectorBundles/example-output/_cokernel_lp__Toric__Vector__Bundle__Klyachko_cm__Matrix_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_cocycle__Check.out -> ../../OldToricVectorBundles/example-output/_cocycle__Check.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_charts.out -> ../../OldToricVectorBundles/example-output/_charts.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_base.out -> ../../OldToricVectorBundles/example-output/_base.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_add__Filtration.out -> ../../OldToricVectorBundles/example-output/_add__Filtration.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_add__Degrees.out -> ../../OldToricVectorBundles/example-output/_add__Degrees.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_add__Base__Change.out -> ../../OldToricVectorBundles/example-output/_add__Base__Change.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/_add__Base.out -> ../../OldToricVectorBundles/example-output/_add__Base.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/___Toric__Vector__Bundle_sp_st_st_sp__Toric__Vector__Bundle.out -> ../../OldToricVectorBundles/example-output/___Toric__Vector__Bundle_sp_st_st_sp__Toric__Vector__Bundle.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/___Toric__Vector__Bundle_sp_pl_pl_sp__Toric__Vector__Bundle.out -> ../../OldToricVectorBundles/example-output/___Toric__Vector__Bundle_sp_pl_pl_sp__Toric__Vector__Bundle.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/___Toric__Vector__Bundle_sp_eq_eq_sp__Toric__Vector__Bundle.out -> ../../OldToricVectorBundles/example-output/___Toric__Vector__Bundle_sp_eq_eq_sp__Toric__Vector__Bundle.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/___Toric__Vector__Bundle__Klyachko.out -> ../../OldToricVectorBundles/example-output/___Toric__Vector__Bundle__Klyachko.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/___Toric__Vector__Bundle__Kaneyama.out -> ../../OldToricVectorBundles/example-output/___Toric__Vector__Bundle__Kaneyama.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/___H__H^__Z__Z_lp__Toric__Vector__Bundle_cm__Matrix_rp.out -> ../../OldToricVectorBundles/example-output/___H__H^__Z__Z_lp__Toric__Vector__Bundle_cm__Matrix_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ToricVectorBundles/example-output/___H__H^__Z__Z_lp__Toric__Vector__Bundle_cm__List_rp.out -> ../../OldToricVectorBundles/example-output/___H__H^__Z__Z_lp__Toric__Vector__Bundle_cm__List_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/TateOnProducts/example-output/_last__Quadrant__Complex.out -> _first__Quadrant__Complex.out (macaulay2-common) /usr/share/doc/Macaulay2/SymmetricPolynomials/example-output/_elementary__Symmetric_lp__Ring__Element_rp.out -> _elementary__Symmetric.out (macaulay2-common) /usr/share/doc/Macaulay2/SymmetricPolynomials/example-output/_build__Symmetric__G__B_lp__Polynomial__Ring_rp.out -> _build__Symmetric__G__B.out (macaulay2-common) /usr/share/doc/Macaulay2/SymbolicPowers/example-output/_asymptotic__Regularity_lp..._cm__Sample__Size_eq_gt..._rp.out -> _asymptotic__Regularity.out (macaulay2-common) /usr/share/doc/Macaulay2/SymbolicPowers/example-output/___Use__Waldschmidt.out -> _lower__Bound__Resurgence_lp..._cm__Use__Waldschmidt_eq_gt..._rp.out (macaulay2-common) /usr/share/doc/Macaulay2/SubalgebraBases/example-output/_force__S__B_lp__Subring_rp.out -> _force__S__B.out (macaulay2-common) /usr/share/doc/Macaulay2/SpectralSequences/example-output/_pruning__Maps_lp__Spectral__Sequence__Page_rp.out -> _pruning__Maps.out (macaulay2-common) /usr/share/doc/Macaulay2/SpectralSequences/example-output/___Spectral__Sequence_sp^_sp__Z__Z.out -> _spectral__Sequence__Page_lp__Filtered__Complex_cm__Z__Z_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/SpectralSequences/example-output/___Page__Map.out -> _pruning__Maps.out (macaulay2-common) /usr/share/doc/Macaulay2/SpectralSequences/example-output/___Edge_sphomomorphisms.out -> _edge__Complex.out (macaulay2-common) /usr/share/doc/Macaulay2/SpechtModule/example-output/_straightening__Algorithm.out -> _garnir__Element.out (macaulay2-common) /usr/share/doc/Macaulay2/Schubert2/example-output/_dim_lp__Abstract__Variety__Map_rp.out -> _dim_lp__Abstract__Variety_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/SRdeformations/example-output/_new__Empty__Complex.out -> _add__Facet__Data__To__Complex.out (macaulay2-common) /usr/share/doc/Macaulay2/SRdeformations/example-output/_link.out -> _closed__Star.out (macaulay2-common) /usr/share/doc/Macaulay2/SRdeformations/example-output/_ideal__To__Complex.out -> _complex__To__Ideal.out (macaulay2-common) /usr/share/doc/Macaulay2/SRdeformations/example-output/_ideal__To__Co__Complex.out -> _complex__To__Ideal.out (macaulay2-common) /usr/share/doc/Macaulay2/SRdeformations/example-output/_fvector.out -> _euler__Characteristic.out (macaulay2-common) /usr/share/doc/Macaulay2/SRdeformations/example-output/_embedding__Complex.out -> _complex__To__Ideal.out (macaulay2-common) /usr/share/doc/Macaulay2/SRdeformations/example-output/_co__Complex__To__Ideal.out -> _complex__To__Ideal.out (macaulay2-common) /usr/share/doc/Macaulay2/RandomMonomialIdeals/example-output/_write__Sample.out -> _sample_lp__String_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/RandomIdeals/example-output/_square__Free_lp__Z__Z_cm__Ring_rp.out -> _square__Free.out (macaulay2-common) /usr/share/doc/Macaulay2/QuadraticIdealExamplesByRoos/example-output/_twodim__Toric__Irrational__Poincare.out -> _onedim__Toric__Irrational__Poincare.out (macaulay2-common) /usr/share/doc/Macaulay2/Polyhedra/html/.Headline -> ../../OldPolyhedra/html/.Headline (macaulay2-common) /usr/share/doc/Macaulay2/Polyhedra/html/.Certification -> ../../OldPolyhedra/html/.Certification (macaulay2-common) /usr/share/doc/Macaulay2/PhylogeneticTrees/example-output/_vertices_lp__Leaf__Tree_rp.out -> _leaves_lp__Leaf__Tree_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/PencilsOfQuadrics/example-output/_mat__Factu2.out -> _mat__Factu1.out (macaulay2-common) /usr/share/doc/Macaulay2/PencilsOfQuadrics/example-output/_mat__Fact2.out -> _mat__Fact1.out (macaulay2-common) /usr/share/doc/Macaulay2/PackageTemplate/html/.Headline -> ../../FirstPackage/html/.Headline (macaulay2-common) /usr/share/doc/Macaulay2/PHCpack/example-output/_real__Slice2__D.out -> _real__Slice1__D.out (macaulay2-common) /usr/share/doc/Macaulay2/PHCpack/example-output/_is__Witness__Set__Member_lp..._cm__Verbose_eq_gt..._rp.out -> _is__Witness__Set__Member.out (macaulay2-common) /usr/share/doc/Macaulay2/OIGroebnerBases/example-output/___Variable__Order.out -> ___Polynomial__O__I__Algebra.out (macaulay2-common) /usr/share/doc/Macaulay2/Normaliz/example-output/_show__Nmz__Options.out -> _set__Nmz__Option.out (macaulay2-common) /usr/share/doc/Macaulay2/Normaliz/example-output/_intcl__Toric__Ring_lp__List_cmall__Computations_eq_gt..._rp.out -> _all__Computations.out (macaulay2-common) /usr/share/doc/Macaulay2/NormalToricVarieties/example-output/_components_lp__Normal__Toric__Variety_rp.out -> _cartesian__Product_lp__Sequence_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/NautyGraphs/example-output/_string__To__Edge__Ideal.out -> ../../Nauty/example-output/_string__To__Edge__Ideal.out (macaulay2-common) /usr/share/doc/Macaulay2/NautyGraphs/example-output/_sparse6__To__Graph6.out -> ../../Nauty/example-output/_sparse6__To__Graph6.out (macaulay2-common) /usr/share/doc/Macaulay2/NautyGraphs/example-output/_graph6__To__Sparse6.out -> ../../Nauty/example-output/_graph6__To__Sparse6.out (macaulay2-common) /usr/share/doc/Macaulay2/NautyGraphs/example-output/_filter__Graphs.out -> ../../Nauty/example-output/_filter__Graphs.out (macaulay2-common) /usr/share/doc/Macaulay2/NautyGraphs/example-output/_count__Graphs.out -> ../../Nauty/example-output/_count__Graphs.out (macaulay2-common) /usr/share/doc/Macaulay2/Macaulay2Doc/example-output/_throw.out -> _catch.out (macaulay2-common) /usr/share/doc/Macaulay2/Macaulay2Doc/example-output/___Stop__Iteration.out -> _next.out (macaulay2-common) /usr/share/doc/Macaulay2/K3Carpets/example-output/_hankel__Matrix.out -> ../../CorrespondenceScrolls/example-output/_hankel__Matrix.out (macaulay2-common) /usr/share/doc/Macaulay2/HolonomicSystems/example-output/_indicial__Ideal.out -> _distraction.out (macaulay2-common) /usr/share/doc/Macaulay2/GraphicalModelsMLE/example-output/_check__P__S__D_lp..._cm__Zero__Tolerance_eq_gt..._rp.out -> _check__P__D_lp..._cm__Zero__Tolerance_eq_gt..._rp.out (macaulay2-common) /usr/share/doc/Macaulay2/GraphicalModels/example-output/_s__Var.out -> _k__Var.out (macaulay2-common) /usr/share/doc/Macaulay2/GraphicalModels/example-output/_p__Var.out -> _k__Var.out (macaulay2-common) /usr/share/doc/Macaulay2/GraphicalModels/example-output/_l__Var.out -> _k__Var.out (macaulay2-common) /usr/share/doc/Macaulay2/GraphicalModels/example-output/_comp__W.out -> _comp__U.out (macaulay2-common) /usr/share/doc/Macaulay2/EquivariantGB/example-output/_priority__Queue.out -> _min_lp__Priority__Queue_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/Complexes/example-output/_resolution__Map.out -> _resolution_lp__Complex_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/CompleteIntersectionResolutions/example-output/_module__As__Ext.out -> _hf__Module__As__Ext.out (macaulay2-common) /usr/share/doc/Macaulay2/CompleteIntersectionResolutions/example-output/_infinite__Betti__Numbers.out -> _finite__Betti__Numbers.out (macaulay2-common) /usr/share/doc/Macaulay2/CoincidentRootLoci/example-output/_random__In__Coisotropic_lp__Coincident__Root__Locus_cm__Z__Z_rp.out -> _is__In__Coisotropic_lp__Ideal_cm__Coincident__Root__Locus_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/ChainComplexExtras/example-output/_nonzero__Min.out -> _nonzero__Max.out (macaulay2-common) /usr/share/doc/Macaulay2/BoijSoederberg/example-output/_decompose__Degrees.out -> _decompose__Betti.out (macaulay2-common) /usr/share/doc/Macaulay2/BernsteinSato/example-output/_prune__Cech__Complex__C__C_lp__Mutable__Hash__Table_rp.out -> _populate__Cech__Complex__C__C_lp__Ideal_cm__List_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/BernsteinSato/example-output/_multiplier__Ideal_lp__Ideal_cm__Q__Q_rp.out -> _has__Rational__Sing_lp__List_rp.out (macaulay2-common) /usr/share/doc/Macaulay2/AdjointIdeal/example-output/_forward__Substitution.out -> _backward__Substitution.out (macaulay2-common) /usr/share/doc/Macaulay2/AdjointIdeal/example-output/_extract__Right__Upper.out -> _extract__Left__Lower.out (macaulay2-common) /usr/share/doc/r-base-core/NEWS.gz -> changelog.gz (r-base-core) /usr/share/doc/unzip/changelog.gz -> History.600.gz (unzip) /usr/share/doc/zip/changelog.gz -> CHANGES.gz (zip) /usr/share/doc/libxml2/NEWS.gz -> changelog.gz (libxml2:amd64) /usr/share/doc/libnauty-2.8.8/changes24-28.txt.gz -> changelog.gz (libnauty-2.8.8:amd64) 0m58.7s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', '-ac', '--ignore-obsolete'] 1m2.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', '-ac', '--ignore-obsolete'] 1m2.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m2.3s DUMP: 0.15.6 1m2.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m2.3s INFO: Running adequate version 0.15.6 now. 1m2.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'r-cran-m2r'] 1m2.4s DUMP: r-cran-m2r: py-file-not-bytecompiled /usr/lib/R/site-library/m2r/server/m2rserver.py 1m2.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'r-cran-m2r'] 1m2.4s ERROR: WARN: Inadequate results from running adequate! r-cran-m2r: py-file-not-bytecompiled /usr/lib/R/site-library/m2r/server/m2rserver.py 1m2.4s ERROR: WARN: Running adequate resulted in inadequate tags found: py-file-not-bytecompiled 1m2.4s INFO: Running scripts pre_remove 1m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m9.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m9.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_exceptions'] 1m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/pre_remove_exceptions'] 1m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m9.4s DUMP: install ok installed apt apt 2.9.6 install ok installed base-files base-files 13.3 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.21-2.1 install ok installed bsdutils bsdutils 1:2.40.2-1 install ok installed ca-certificates ca-certificates 20240203 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.10 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-2 install ok installed fontconfig fontconfig 2.15.0-1.1 install ok installed fontconfig-config fontconfig-config 2.15.0-1.1 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-8 install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-8 install ok installed fonts-glyphicons-halflings fonts-glyphicons-halflings 1.009~3.4.1+dfsg-3 install ok installed fonts-katex fonts-katex 0.16.10+~cs6.1.0-2 install ok installed gcc-14-base:amd64 gcc-14-base 14.1.0-5 install ok installed gdbmtool gdbmtool 1.23-6 install ok installed gpgv gpgv 2.2.43-8 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.6 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libblas3:amd64 libblas3 3.12.0-3 install ok installed libblkid1:amd64 libblkid1 2.40.2-1 install ok installed libboost-stacktrace1.83.0:amd64 libboost-stacktrace1.83.0 1.83.0-3+b2 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b4 install ok installed libbsd0:amd64 libbsd0 0.12.2-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5.1 install ok installed libc-bin libc-bin 2.39-6 install ok installed libc6:amd64 libc6 2.39-6 install ok installed libcairo2:amd64 libcairo2 1.18.0-3+b1 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-1+b1 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcliquer1 libcliquer1 1.21-3+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libcurl4t64:amd64 libcurl4t64 8.9.0-3 install ok installed libdatrie1:amd64 libdatrie1 0.2.13-3 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libdeflate0:amd64 libdeflate0 1.20-1 install ok installed libeantic3:amd64 libeantic3 2.0.2+ds-2 install ok installed libexpat1:amd64 libexpat1 2.6.2-1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libflint19:amd64 libflint19 3.1.3-1 install ok installed libfontconfig1:amd64 libfontconfig1 2.15.0-1.1 install ok installed libfreetype6:amd64 libfreetype6 2.13.2+dfsg-1+b4 install ok installed libfribidi0:amd64 libfribidi0 1.0.15-1 install ok installed libfrobby0:amd64 libfrobby0 0.9.5-4+b1 install ok installed libgc1:amd64 libgc1 1:8.2.6-2 install ok installed libgcc-s1:amd64 libgcc-s1 14.1.0-5 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-5 install ok installed libgdbm6t64:amd64 libgdbm6t64 1.23-6 install ok installed libgf2x3:amd64 libgf2x3 1.3.0-2+b1 install ok installed libgfortran5:amd64 libgfortran5 14.1.0-5 install ok installed libgit2-1.7:amd64 libgit2-1.7 1.7.2+ds-1+b2 install ok installed libgivaro9:amd64 libgivaro9 4.2.0-5 install ok installed libglib2.0-0t64:amd64 libglib2.0-0t64 2.80.4-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgmpxx4ldbl:amd64 libgmpxx4ldbl 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgomp1:amd64 libgomp1 14.1.0-5 install ok installed libgpg-error0:amd64 libgpg-error0 1.49-2 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-3 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 8.3.0-2+b1 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libhttp-parser2.9:amd64 libhttp-parser2.9 2.9.4-6+b1 install ok installed libhwloc15:amd64 libhwloc15 2.11.0-2 install ok installed libice6:amd64 libice6 2:1.0.10-1+b1 install ok installed libicu72:amd64 libicu72 72.1-5 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libjbig0:amd64 libjbig0 2.1-6.1+b1 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-3 install ok installed libjs-bootsidemenu libjs-bootsidemenu 1.0.0-3 install ok installed libjs-bootstrap libjs-bootstrap 3.4.1+dfsg-3 install ok installed libjs-d3 libjs-d3 3.5.17-4 install ok installed libjs-jquery libjs-jquery 3.6.1+dfsg+~3.5.14-1 install ok installed libjs-katex libjs-katex 0.16.10+~cs6.1.0-2 install ok installed libjs-nouislider libjs-nouislider 15.8.1+ds-1 install ok installed libjs-three libjs-three 111+dfsg1-3 install ok installed libjs-underscore libjs-underscore 1.13.4~dfsg+~1.11.4-3 install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-3 install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-3 install ok installed liblapack3:amd64 liblapack3 3.12.0-3 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.18+dfsg-2 install ok installed liblerc4:amd64 liblerc4 4.0.0+ds-4+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmathic0v5:amd64 libmathic0v5 1.0~git20230916-1+b1 install ok installed libmathicgb0t64:amd64 libmathicgb0t64 1.0~git20240206-1.1 install ok installed libmbedcrypto7t64:amd64 libmbedcrypto7t64 2.28.8-1 install ok installed libmbedtls14t64:amd64 libmbedtls14t64 2.28.8-1 install ok installed libmbedx509-1t64:amd64 libmbedx509-1t64 2.28.8-1 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmemtailor0:amd64 libmemtailor0 1.0~git20230916-1 install ok installed libmount1:amd64 libmount1 2.40.2-1 install ok installed libmpfi0:amd64 libmpfi0 1.5.4+ds-3 install ok installed libmpfr6:amd64 libmpfr6 4.2.1-1+b1 install ok installed libmps3t64:amd64 libmps3t64 3.2.1-10.1+b1 install ok installed libnauty-2.8.8:amd64 libnauty-2.8.8 2.8.8+ds-5 install ok installed libncursesw6:amd64 libncursesw6 6.5-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.62.1-2 install ok installed libnormaliz3:amd64 libnormaliz3 3.10.3+ds-1 install ok installed libntl44:amd64 libntl44 11.5.1-1+b2 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.54.0+ds-1 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.54.0+ds-1 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.54.0+ds-1 install ok installed libpaper-utils libpaper-utils 1.1.29+b1 install ok installed libpaper1:amd64 libpaper1 1.1.29+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.42.2-1+b1 install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.43-5 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.2-1.1 install ok installed libpython3.12-minimal:amd64 libpython3.12-minimal 3.12.4-3 install ok installed libpython3.12-stdlib:amd64 libpython3.12-stdlib 3.12.4-3 install ok installed libpython3.12t64:amd64 libpython3.12t64 3.12.4-3 install ok installed libquadmath0:amd64 libquadmath0 14.1.0-5 install ok installed libreadline8t64:amd64 libreadline8t64 8.2-4 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b4 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-6 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-6 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.5-2+b3 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b4 install ok installed libsepol2:amd64 libsepol2 3.5-2+b1 install ok installed libsharpyuv0:amd64 libsharpyuv0 1.4.0-0.1 install ok installed libsingular4m4n0:amd64 libsingular4m4n0 1:4.4.0-p3+ds-1 install ok installed libsm6:amd64 libsm6 2:1.2.3-1+b1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.0-1 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.0-6 install ok installed libssl3t64:amd64 libssl3t64 3.2.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.1.0-5 install ok installed libsystemd0:amd64 libsystemd0 256.4-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtbb12:amd64 libtbb12 2021.12.0-1 install ok installed libtbbbind-2-5:amd64 libtbbbind-2-5 2021.12.0-1 install ok installed libtbbmalloc2:amd64 libtbbmalloc2 2021.12.0-1 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.14+dfsg-1 install ok installed libtcmalloc-minimal4t64:amd64 libtcmalloc-minimal4t64 2.15-3 install ok installed libthai-data libthai-data 0.1.29-2 install ok installed libthai0:amd64 libthai0 0.1.29-2 install ok installed libtiff6:amd64 libtiff6 4.5.1+git230720-4 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libtirpc-common libtirpc-common 1.3.4+ds-1.3 install ok installed libtirpc3t64:amd64 libtirpc3t64 1.3.4+ds-1.3 install ok installed libtk8.6:amd64 libtk8.6 8.6.14-1 install ok installed libudev1:amd64 libudev1 256.4-2 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-1 install ok installed libuv1t64:amd64 libuv1t64 1.48.0-5 install ok installed libwebp7:amd64 libwebp7 1.4.0-0.1 install ok installed libx11-6:amd64 libx11-6 2:1.8.7-1+b1 install ok installed libx11-data libx11-data 2:1.8.7-1 install ok installed libxau6:amd64 libxau6 1:1.0.9-1+b1 install ok installed libxcb-render0:amd64 libxcb-render0 1.17.0-2 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.17.0-2 install ok installed libxcb1:amd64 libxcb1 1.17.0-2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3+b1 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b1 install ok installed libxft2:amd64 libxft2 2.3.6-1+b1 install ok installed libxml2:amd64 libxml2 2.12.7+dfsg-3+b1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1.1+b1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1+b1 install ok installed libxt6t64:amd64 libxt6t64 1:1.2.1-1.2 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed littler littler 0.3.20-1 install ok installed login login 1:4.15.3-3 install ok installed logsave logsave 1.47.1-1 install ok installed macaulay2 macaulay2 1.24.05+ds-4 install ok installed macaulay2-common macaulay2-common 1.24.05+ds-4 install ok installed mawk mawk 1.3.4.20240622-2 install ok installed media-types media-types 10.1.0 install ok installed mount mount 2.40.2-1 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed net-tools net-tools 2.10-1.1 install ok installed netbase netbase 6.4 install ok installed node-clipboard node-clipboard 2.0.11+ds+~cs9.6.11-1 install ok installed normaliz normaliz 3.10.3+ds-1 install ok installed normaliz-bin normaliz-bin 3.10.3+ds-1 install ok installed openssl openssl 3.2.2-1 install ok installed passwd passwd 1:4.15.3-3 install ok installed perl-base perl-base 5.38.2-5 install ok installed r-base-core r-base-core 4.4.1-1 install ok installed r-cran-askpass r-cran-askpass 1.2.0-1 install ok installed r-cran-cachem r-cran-cachem 1.0.8-1 install ok installed r-cran-cli r-cran-cli 3.6.2-1 install ok installed r-cran-clipr r-cran-clipr 0.8.0-1 install ok installed r-cran-colorspace r-cran-colorspace 2.1-0+dfsg-1 install ok installed r-cran-cpp11 r-cran-cpp11 0.4.7-1 install ok installed r-cran-crayon r-cran-crayon 1.5.2-1 install ok installed r-cran-credentials r-cran-credentials 2.0.1-1 install ok installed r-cran-curl r-cran-curl 5.2.1+dfsg-1 install ok installed r-cran-desc r-cran-desc 1.4.3-1 install ok installed r-cran-dplyr r-cran-dplyr 1.1.4-1 install ok installed r-cran-fansi r-cran-fansi 1.0.5-1 install ok installed r-cran-farver r-cran-farver 2.1.2-1 install ok installed r-cran-fastmap r-cran-fastmap 1.1.1-1 install ok installed r-cran-fs r-cran-fs 1.6.4+dfsg-1 install ok installed r-cran-generics r-cran-generics 0.1.3-1 install ok installed r-cran-gert r-cran-gert 2.0.1+dfsg-1 install ok installed r-cran-ggplot2 r-cran-ggplot2 3.5.1+dfsg-1 install ok installed r-cran-gh r-cran-gh 1.4.1-1 install ok installed r-cran-gitcreds r-cran-gitcreds 0.1.2-1 install ok installed r-cran-glue r-cran-glue 1.7.0-1 install ok installed r-cran-gmp r-cran-gmp 0.7-4-1 install ok installed r-cran-gtable r-cran-gtable 0.3.5+dfsg-1 install ok installed r-cran-httr2 r-cran-httr2 1.0.2-1 install ok installed r-cran-ini r-cran-ini 0.3.1-2 install ok installed r-cran-isoband r-cran-isoband 0.2.7-1 install ok installed r-cran-jsonlite r-cran-jsonlite 1.8.8+dfsg-1 install ok installed r-cran-labeling r-cran-labeling 0.4.3-1 install ok installed r-cran-lattice r-cran-lattice 0.22-6-1 install ok installed r-cran-lifecycle r-cran-lifecycle 1.0.4+dfsg-1 install ok installed r-cran-littler r-cran-littler 0.3.20-1 install ok installed r-cran-m2r r-cran-m2r 1.0.2+dfsg-4 install ok installed r-cran-magrittr r-cran-magrittr 2.0.3-1 install ok installed r-cran-mass r-cran-mass 7.3-61-1 install ok installed r-cran-mathjaxr r-cran-mathjaxr 1.6-0-1 install ok installed r-cran-matrix r-cran-matrix 1.7-0-3 install ok installed r-cran-memoise r-cran-memoise 2.0.1-1 install ok installed r-cran-mgcv r-cran-mgcv 1.9-1-1 install ok installed r-cran-mpoly r-cran-mpoly 1.1.1-2 install ok installed r-cran-munsell r-cran-munsell 0.5.1-1 install ok installed r-cran-nlme r-cran-nlme 3.1.165-1 install ok installed r-cran-openssl r-cran-openssl 2.2.0+dfsg-1 install ok installed r-cran-orthopolynom r-cran-orthopolynom 1.0.6.1-1 install ok installed r-cran-partitions r-cran-partitions 1.10-7+ds-1 install ok installed r-cran-pillar r-cran-pillar 1.9.0+dfsg-1 install ok installed r-cran-pkgconfig r-cran-pkgconfig 2.0.3-2 install ok installed r-cran-pkgkitten r-cran-pkgkitten 0.2.3-1 install ok installed r-cran-plyr r-cran-plyr 1.8.9-1 install ok installed r-cran-polynom r-cran-polynom 1.4-1+dfsg-1 install ok installed r-cran-purrr r-cran-purrr 1.0.2-1 install ok installed r-cran-r6 r-cran-r6 2.5.1-1 install ok installed r-cran-rappdirs r-cran-rappdirs 0.3.3-1 install ok installed r-cran-rbibutils r-cran-rbibutils 2.2.16-1 install ok installed r-cran-rcolorbrewer r-cran-rcolorbrewer 1.1-3-1 install ok installed r-cran-rcpp r-cran-rcpp 1.0.13-1 install ok installed r-cran-rdpack r-cran-rdpack 2.6-1 install ok installed r-cran-rlang r-cran-rlang 1.1.4-1 install ok installed r-cran-rprojroot r-cran-rprojroot 2.0.4-1 install ok installed r-cran-rstudioapi r-cran-rstudioapi 0.16.0-1 install ok installed r-cran-scales r-cran-scales 1.3.0-1 install ok installed r-cran-sets r-cran-sets 1.0.25+ds-1 install ok installed r-cran-stringi r-cran-stringi 1.8.3-1 install ok installed r-cran-stringr r-cran-stringr 1.5.1-1 install ok installed r-cran-sys r-cran-sys 3.4.2-1 install ok installed r-cran-tibble r-cran-tibble 3.2.1+dfsg-2 install ok installed r-cran-tidyr r-cran-tidyr 1.3.1-1 install ok installed r-cran-tidyselect r-cran-tidyselect 1.2.1+dfsg-1 install ok installed r-cran-usethis r-cran-usethis 2.2.3-1 install ok installed r-cran-utf8 r-cran-utf8 1.2.4-1 install ok installed r-cran-vctrs r-cran-vctrs 0.6.5-1 install ok installed r-cran-viridislite r-cran-viridislite 0.4.2-2 install ok installed r-cran-whisker r-cran-whisker 0.4.1-1 install ok installed r-cran-withr r-cran-withr 3.0.0+dfsg-1 install ok installed r-cran-yaml r-cran-yaml 2.3.8-2 install ok installed r-cran-zip r-cran-zip 2.3.1-1 install ok installed readline-common readline-common 8.2-4 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.24 install ok installed singular-data singular-data 1:4.4.0-p3+ds-1 install ok installed sysvinit-utils sysvinit-utils 3.09-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed ucf ucf 3.0043+nmu1 install ok installed unzip unzip 6.0-28 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-1 install ok installed x11-common x11-common 1:7.7+23.1 install ok installed xdg-utils xdg-utils 1.1.3-4.1 install ok installed zip zip 3.0-14 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 1m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', 'remove', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-glyphicons-halflings', 'fonts-katex', 'gdbmtool', 'libblas3:amd64', 'libboost-stacktrace1.83.0:amd64', 'libbrotli1:amd64', 'libcairo2:amd64', 'libcliquer1', 'libcurl4t64:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libeantic3:amd64', 'libexpat1:amd64', 'libflint19:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libfrobby0:amd64', 'libgc1:amd64', 'libgdbm6t64:amd64', 'libgf2x3:amd64', 'libgfortran5:amd64', 'libgit2-1.7:amd64', 'libgivaro9:amd64', 'libglib2.0-0t64:amd64', 'libgmpxx4ldbl:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhttp-parser2.9:amd64', 'libhwloc15:amd64', 'libice6:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootsidemenu', 'libjs-bootstrap', 'libjs-d3', 'libjs-jquery', 'libjs-katex', 'libjs-nouislider', 'libjs-three', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'libmathic0v5:amd64', 'libmathicgb0t64:amd64', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmemtailor0:amd64', 'libmpfi0:amd64', 'libmpfr6:amd64', 'libmps3t64:amd64', 'libnauty-2.8.8:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnormaliz3:amd64', 'libntl44:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsharpyuv0:amd64', 'libsingular4m4n0:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libtcmalloc-minimal4t64:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libuv1t64:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'littler', 'macaulay2', 'macaulay2-common', 'media-types', 'net-tools', 'netbase', 'node-clipboard', 'normaliz', 'normaliz-bin', 'openssl', 'r-base-core', 'r-cran-askpass', 'r-cran-cachem', 'r-cran-cli', 'r-cran-clipr', 'r-cran-colorspace', 'r-cran-cpp11', 'r-cran-crayon', 'r-cran-credentials', 'r-cran-curl', 'r-cran-desc', 'r-cran-dplyr', 'r-cran-fansi', 'r-cran-farver', 'r-cran-fastmap', 'r-cran-fs', 'r-cran-generics', 'r-cran-gert', 'r-cran-ggplot2', 'r-cran-gh', 'r-cran-gitcreds', 'r-cran-glue', 'r-cran-gmp', 'r-cran-gtable', 'r-cran-httr2', 'r-cran-ini', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-mathjaxr', 'r-cran-matrix', 'r-cran-memoise', 'r-cran-mgcv', 'r-cran-mpoly', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-openssl', 'r-cran-orthopolynom', 'r-cran-partitions', 'r-cran-pillar', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-plyr', 'r-cran-polynom', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rappdirs', 'r-cran-rbibutils', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rdpack', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-sets', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-sys', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-usethis', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-whisker', 'r-cran-withr', 'r-cran-yaml', 'r-cran-zip', 'readline-common', 'sensible-utils', 'singular-data', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'r-cran-m2r'] 1m13.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: ca-certificates fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-glyphicons-halflings fonts-katex gdbmtool libblas3 libboost-stacktrace1.83.0 libbrotli1 libcairo2 libcliquer1 libcurl4t64 libdatrie1 libdeflate0 libeantic3 libexpat1 libflint19 libfontconfig1 libfreetype6 libfribidi0 libfrobby0 libgc1 libgdbm6t64 libgf2x3 libgfortran5 libgit2-1.7 libgivaro9 libglib2.0-0t64 libgmpxx4ldbl libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhttp-parser2.9 libhwloc15 libice6 libicu72 libjbig0 libjpeg62-turbo libjs-bootsidemenu libjs-bootstrap libjs-d3 libjs-jquery libjs-katex libjs-nouislider libjs-three libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 liblerc4 libmathic0v5 libmathicgb0t64 libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmemtailor0 libmpfi0 libmpfr6 libmps3t64 libnauty-2.8.8 libncursesw6 libnghttp2-14 libnormaliz3 libntl44 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libquadmath0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsharpyuv0 libsingular4m4n0 libsm6 libsqlite3-0 libssh2-1t64 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtcmalloc-minimal4t64 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libuv1t64 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6t64 littler macaulay2 macaulay2-common media-types net-tools netbase node-clipboard normaliz normaliz-bin openssl r-base-core r-cran-askpass r-cran-cachem r-cran-cli r-cran-clipr r-cran-colorspace r-cran-cpp11 r-cran-crayon r-cran-credentials r-cran-curl r-cran-desc r-cran-dplyr r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fs r-cran-generics r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-gitcreds r-cran-glue r-cran-gmp r-cran-gtable r-cran-httr2 r-cran-ini r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-m2r r-cran-magrittr r-cran-mass r-cran-mathjaxr r-cran-matrix r-cran-memoise r-cran-mgcv r-cran-mpoly r-cran-munsell r-cran-nlme r-cran-openssl r-cran-orthopolynom r-cran-partitions r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-polynom r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rdpack r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-sets r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-usethis r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-whisker r-cran-withr r-cran-yaml r-cran-zip readline-common sensible-utils singular-data ucf unzip x11-common xdg-utils zip 0 upgraded, 0 newly installed, 211 to remove and 0 not upgraded. After this operation, 640 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 41001 files and directories currently installed.) Removing r-cran-m2r (1.0.2+dfsg-4) ... Removing r-cran-mpoly (1.1.1-2) ... Removing r-cran-ggplot2 (3.5.1+dfsg-1) ... Removing r-cran-mgcv (1.9-1-1) ... Removing r-cran-matrix (1.7-0-3) ... Removing r-cran-plyr (1.8.9-1) ... Removing r-cran-rcpp (1.0.13-1) ... Removing r-cran-scales (1.3.0-1) ... Removing r-cran-rcolorbrewer (1.1-3-1) ... Removing r-cran-usethis (2.2.3-1) ... Removing r-cran-gert (2.0.1+dfsg-1) ... Removing r-cran-zip (2.3.1-1) ... Removing macaulay2 (1.24.05+ds-4) ... Removing macaulay2-common (1.24.05+ds-4) ... Removing libjs-bootstrap (3.4.1+dfsg-3) ... Removing fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Removing libjs-katex (0.16.10+~cs6.1.0-2) ... Removing fonts-katex (0.16.10+~cs6.1.0-2) ... Removing gdbmtool (1.23-6) ... Removing libboost-stacktrace1.83.0:amd64 (1.83.0-3+b2) ... Removing r-cran-gh (1.4.1-1) ... Removing r-cran-httr2 (1.0.2-1) ... Removing normaliz (3.10.3+ds-1) ... Removing normaliz-bin (3.10.3+ds-1) ... Removing libnormaliz3:amd64 (3.10.3+ds-1) ... Removing libnauty-2.8.8:amd64 (2.8.8+ds-5) ... Removing libcliquer1 (1.21-3+b1) ... Removing libeantic3:amd64 (2.0.2+ds-2) ... Removing libpython3.12t64:amd64 (3.12.4-3) ... Removing libsingular4m4n0:amd64 (1:4.4.0-p3+ds-1) ... Removing libflint19:amd64 (3.1.3-1) ... Removing libfrobby0:amd64 (0.9.5-4+b1) ... Removing libgc1:amd64 (1:8.2.6-2) ... Removing libgdbm6t64:amd64 (1.23-6) ... Removing libntl44:amd64 (11.5.1-1+b2) ... Removing libgf2x3:amd64 (1.3.0-2+b1) ... Removing libgit2-1.7:amd64 (1.7.2+ds-1+b2) ... Removing libgivaro9:amd64 (4.2.0-5) ... Removing libmps3t64:amd64 (3.2.1-10.1+b1) ... Removing libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-2+b1) ... Removing libhttp-parser2.9:amd64 (2.9.4-6+b1) ... Removing libmathicgb0t64:amd64 (1.0~git20240206-1.1) ... Removing libtbb12:amd64 (2021.12.0-1) ... Removing libtbbbind-2-5:amd64 (2021.12.0-1) ... Removing libhwloc15:amd64 (2.11.0-2) ... Removing r-cran-tidyr (1.3.1-1) ... Removing r-cran-stringr (1.5.1-1) ... Removing r-cran-stringi (1.8.3-1) ... Removing libxml2:amd64 (2.12.7+dfsg-3+b1) ... Removing libjs-bootsidemenu (1.0.0-3) ... Removing libjs-d3 (3.5.17-4) ... Removing libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Removing libjs-nouislider (15.8.1+ds-1) ... Removing libjs-three (111+dfsg1-3) ... Removing libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Removing libmathic0v5:amd64 (1.0~git20230916-1+b1) ... Removing libmbedtls14t64:amd64 (2.28.8-1) ... Removing libmbedx509-1t64:amd64 (2.28.8-1) ... Removing libmbedcrypto7t64:amd64 (2.28.8-1) ... Removing libmemtailor0:amd64 (1.0~git20230916-1) ... Removing libmpfi0:amd64 (1.5.4+ds-3) ... Removing libmpfr6:amd64 (4.2.1-1+b1) ... Removing libpython3.12-stdlib:amd64 (3.12.4-3) ... find: '/usr/lib/python3': No such file or directory Removing libncursesw6:amd64 (6.5-2) ... Removing libpython3.12-minimal:amd64 (3.12.4-3) ... find: '/usr/lib/python3': No such file or directory Removing libquadmath0:amd64 (14.1.0-5) ... Removing libsqlite3-0:amd64 (3.46.0-1) ... Removing libtbbmalloc2:amd64 (2021.12.0-1) ... Removing libtcmalloc-minimal4t64:amd64 (2.15-3) ... Removing r-cran-fs (1.6.4+dfsg-1) ... Removing libuv1t64:amd64 (1.48.0-5) ... Removing littler (0.3.20-1) ... Removing media-types (10.1.0) ... Removing net-tools (2.10-1.1) ... Removing netbase (6.4) ... Removing node-clipboard (2.0.11+ds+~cs9.6.11-1) ... Removing r-cran-credentials (2.0.1-1) ... Removing r-cran-openssl (2.2.0+dfsg-1) ... Removing r-cran-askpass (1.2.0-1) ... Removing r-cran-memoise (2.0.1-1) ... Removing r-cran-cachem (1.0.8-1) ... Removing r-cran-dplyr (1.1.4-1) ... Removing r-cran-tidyselect (1.2.1+dfsg-1) ... Removing r-cran-tibble (3.2.1+dfsg-2) ... Removing r-cran-pillar (1.9.0+dfsg-1) ... Removing r-cran-clipr (0.8.0-1) ... Removing r-cran-munsell (0.5.1-1) ... Removing r-cran-colorspace (2.1-0+dfsg-1) ... Removing r-cran-cpp11 (0.4.7-1) ... Removing r-cran-crayon (1.5.2-1) ... Removing r-cran-desc (1.4.3-1) ... Removing r-cran-fansi (1.0.5-1) ... Removing r-cran-farver (2.1.2-1) ... Removing r-cran-fastmap (1.1.1-1) ... Removing r-cran-generics (0.1.3-1) ... Removing r-cran-gitcreds (0.1.2-1) ... Removing r-cran-purrr (1.0.2-1) ... Removing r-cran-partitions (1.10-7+ds-1) ... Removing r-cran-gmp (0.7-4-1) ... Removing r-cran-gtable (0.3.5+dfsg-1) ... Removing r-cran-ini (0.3.1-2) ... Removing r-cran-isoband (0.2.7-1) ... Removing r-cran-jsonlite (1.8.8+dfsg-1) ... Removing r-cran-labeling (0.4.3-1) ... Removing r-cran-nlme (3.1.165-1) ... Removing r-cran-lattice (0.22-6-1) ... Removing r-cran-littler (0.3.20-1) ... Removing r-cran-magrittr (2.0.3-1) ... Removing r-cran-mass (7.3-61-1) ... Removing r-cran-mathjaxr (1.6-0-1) ... Removing r-cran-orthopolynom (1.0.6.1-1) ... Removing r-cran-pkgconfig (2.0.3-2) ... Removing r-cran-pkgkitten (0.2.3-1) ... Removing r-cran-polynom (1.4-1+dfsg-1) ... Removing r-cran-r6 (2.5.1-1) ... Removing r-cran-rappdirs (0.3.3-1) ... Removing r-cran-rdpack (2.6-1) ... Removing r-cran-rbibutils (2.2.16-1) ... Removing r-cran-rprojroot (2.0.4-1) ... Removing r-cran-rstudioapi (0.16.0-1) ... Removing r-cran-sets (1.0.25+ds-1) ... Removing r-cran-sys (3.4.2-1) ... Removing r-cran-utf8 (1.2.4-1) ... Removing r-cran-viridislite (0.4.2-2) ... Removing r-cran-whisker (0.4.1-1) ... Removing r-cran-withr (3.0.0+dfsg-1) ... Removing r-cran-yaml (2.3.8-2) ... Removing singular-data (1:4.4.0-p3+ds-1) ... Removing r-cran-curl (5.2.1+dfsg-1) ... Removing r-cran-vctrs (0.6.5-1) ... Removing r-cran-lifecycle (1.0.4+dfsg-1) ... Removing r-cran-glue (1.7.0-1) ... Removing r-cran-rlang (1.1.4-1) ... Removing r-cran-cli (3.6.2-1) ... Removing r-base-core (4.4.1-1) ... Removing ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ... Removing libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ... Removing libpango-1.0-0:amd64 (1.54.0+ds-1) ... Removing fontconfig (2.15.0-1.1) ... Removing libtk8.6:amd64 (8.6.14-1) ... Removing libxft2:amd64 (2.3.6-1+b1) ... Removing libcairo2:amd64 (1.18.0-3+b1) ... Removing libfontconfig1:amd64 (2.15.0-1.1) ... Removing fontconfig-config (2.15.0-1.1) ... Removing fonts-dejavu-core (2.37-8) ... Removing fonts-dejavu-mono (2.37-8) ... Removing liblapack3:amd64 (3.12.0-3) ... Removing libblas3:amd64 (3.12.0-3) ... Removing libharfbuzz0b:amd64 (8.3.0-2+b1) ... Removing libfreetype6:amd64 (2.13.2+dfsg-1+b4) ... Removing libcurl4t64:amd64 (8.9.0-3) ... Removing libbrotli1:amd64 (1.1.0-2+b4) ... Removing libthai0:amd64 (0.1.29-2) ... Removing libdatrie1:amd64 (0.2.13-3) ... Removing libtiff6:amd64 (4.5.1+git230720-4) ... Removing libdeflate0:amd64 (1.20-1) ... Removing libexpat1:amd64 (2.6.2-1) ... Removing libfribidi0:amd64 (1.0.15-1) ... Removing libgfortran5:amd64 (14.1.0-5) ... Removing libglib2.0-0t64:amd64 (2.80.4-1) ... Removing libgomp1:amd64 (14.1.0-5) ... Removing libgraphite2-3:amd64 (1.3.14-2) ... Removing libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Removing libgssapi-krb5-2:amd64 (1.21.3-3) ... Removing libxt6t64:amd64 (1:1.2.1-1.2) ... Removing libsm6:amd64 (2:1.2.3-1+b1) ... Removing libice6:amd64 (2:1.0.10-1+b1) ... Removing libicu72:amd64 (72.1-5) ... Removing libjbig0:amd64 (2.1-6.1+b1) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-3) ... Removing libkrb5-3:amd64 (1.21.3-3) ... Removing libk5crypto3:amd64 (1.21.3-3) ... Removing libkeyutils1:amd64 (1.6.3-3) ... Removing libkrb5support0:amd64 (1.21.3-3) ... Removing libldap-2.5-0:amd64 (2.5.18+dfsg-2) ... Removing liblerc4:amd64 (4.0.0+ds-4+b1) ... Removing libnghttp2-14:amd64 (1.62.1-2) ... Removing libpaper-utils (1.1.29+b1) ... Removing libpaper1:amd64 (1.1.29+b1) ... Removing libpixman-1-0:amd64 (0.42.2-1+b1) ... Removing libpng16-16t64:amd64 (1.6.43-5) ... Removing libpsl5t64:amd64 (0.21.2-1.1) ... Removing libreadline8t64:amd64 (8.2-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Removing libwebp7:amd64 (1.4.0-0.1) ... Removing libsharpyuv0:amd64 (1.4.0-0.1) ... Removing libssh2-1t64:amd64 (1.11.0-6) ... Removing libtcl8.6:amd64 (8.6.14+dfsg-1) ... Removing libthai-data (0.1.29-2) ... Removing libtirpc-common (1.3.4+ds-1.3) ... Removing libxss1:amd64 (1:1.2.3-1+b1) ... Removing libxrender1:amd64 (1:0.9.10-1.1+b1) ... Removing libxcb-shm0:amd64 (1.17.0-2) ... Removing libxcb-render0:amd64 (1.17.0-2) ... Removing libxext6:amd64 (2:1.3.4-1+b1) ... Removing openssl (3.2.2-1) ... Removing readline-common (8.2-4) ... Removing ucf (3.0043+nmu1) ... Removing sensible-utils (0.0.24) ... Removing unzip (6.0-28) ... Removing x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing xdg-utils (1.1.3-4.1) ... Removing zip (3.0-14) ... Removing libx11-6:amd64 (2:1.8.7-1+b1) ... Removing libx11-data (2:1.8.7-1) ... Removing libxcb1:amd64 (1.17.0-2) ... Removing libxau6:amd64 (1:1.0.9-1+b1) ... Removing libxdmcp6:amd64 (1:1.1.2-3+b1) ... Processing triggers for libc-bin (2.39-6) ... 1m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', 'remove', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-glyphicons-halflings', 'fonts-katex', 'gdbmtool', 'libblas3:amd64', 'libboost-stacktrace1.83.0:amd64', 'libbrotli1:amd64', 'libcairo2:amd64', 'libcliquer1', 'libcurl4t64:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libeantic3:amd64', 'libexpat1:amd64', 'libflint19:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libfrobby0:amd64', 'libgc1:amd64', 'libgdbm6t64:amd64', 'libgf2x3:amd64', 'libgfortran5:amd64', 'libgit2-1.7:amd64', 'libgivaro9:amd64', 'libglib2.0-0t64:amd64', 'libgmpxx4ldbl:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhttp-parser2.9:amd64', 'libhwloc15:amd64', 'libice6:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootsidemenu', 'libjs-bootstrap', 'libjs-d3', 'libjs-jquery', 'libjs-katex', 'libjs-nouislider', 'libjs-three', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'libmathic0v5:amd64', 'libmathicgb0t64:amd64', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmemtailor0:amd64', 'libmpfi0:amd64', 'libmpfr6:amd64', 'libmps3t64:amd64', 'libnauty-2.8.8:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnormaliz3:amd64', 'libntl44:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsharpyuv0:amd64', 'libsingular4m4n0:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libtcmalloc-minimal4t64:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libuv1t64:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'littler', 'macaulay2', 'macaulay2-common', 'media-types', 'net-tools', 'netbase', 'node-clipboard', 'normaliz', 'normaliz-bin', 'openssl', 'r-base-core', 'r-cran-askpass', 'r-cran-cachem', 'r-cran-cli', 'r-cran-clipr', 'r-cran-colorspace', 'r-cran-cpp11', 'r-cran-crayon', 'r-cran-credentials', 'r-cran-curl', 'r-cran-desc', 'r-cran-dplyr', 'r-cran-fansi', 'r-cran-farver', 'r-cran-fastmap', 'r-cran-fs', 'r-cran-generics', 'r-cran-gert', 'r-cran-ggplot2', 'r-cran-gh', 'r-cran-gitcreds', 'r-cran-glue', 'r-cran-gmp', 'r-cran-gtable', 'r-cran-httr2', 'r-cran-ini', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-mathjaxr', 'r-cran-matrix', 'r-cran-memoise', 'r-cran-mgcv', 'r-cran-mpoly', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-openssl', 'r-cran-orthopolynom', 'r-cran-partitions', 'r-cran-pillar', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-plyr', 'r-cran-polynom', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rappdirs', 'r-cran-rbibutils', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rdpack', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-sets', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-sys', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-usethis', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-whisker', 'r-cran-withr', 'r-cran-yaml', 'r-cran-zip', 'readline-common', 'sensible-utils', 'singular-data', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'r-cran-m2r'] 1m13.0s INFO: Running scripts post_remove 1m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_remove_exceptions'] 1m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_remove_exceptions'] 1m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg', '--purge', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-glyphicons-halflings', 'fonts-katex', 'gdbmtool', 'libblas3:amd64', 'libboost-stacktrace1.83.0:amd64', 'libbrotli1:amd64', 'libcairo2:amd64', 'libcliquer1', 'libcurl4t64:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libeantic3:amd64', 'libexpat1:amd64', 'libflint19:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libfrobby0:amd64', 'libgc1:amd64', 'libgdbm6t64:amd64', 'libgf2x3:amd64', 'libgfortran5:amd64', 'libgit2-1.7:amd64', 'libgivaro9:amd64', 'libglib2.0-0t64:amd64', 'libgmpxx4ldbl:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhttp-parser2.9:amd64', 'libhwloc15:amd64', 'libice6:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootsidemenu', 'libjs-bootstrap', 'libjs-d3', 'libjs-jquery', 'libjs-katex', 'libjs-nouislider', 'libjs-three', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'libmathic0v5:amd64', 'libmathicgb0t64:amd64', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmemtailor0:amd64', 'libmpfi0:amd64', 'libmpfr6:amd64', 'libmps3t64:amd64', 'libnauty-2.8.8:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnormaliz3:amd64', 'libntl44:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsharpyuv0:amd64', 'libsingular4m4n0:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libtcmalloc-minimal4t64:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libuv1t64:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'littler', 'macaulay2', 'macaulay2-common', 'media-types', 'net-tools', 'netbase', 'node-clipboard', 'normaliz', 'normaliz-bin', 'openssl', 'r-base-core', 'r-cran-askpass', 'r-cran-cachem', 'r-cran-cli', 'r-cran-clipr', 'r-cran-colorspace', 'r-cran-cpp11', 'r-cran-crayon', 'r-cran-credentials', 'r-cran-curl', 'r-cran-desc', 'r-cran-dplyr', 'r-cran-fansi', 'r-cran-farver', 'r-cran-fastmap', 'r-cran-fs', 'r-cran-generics', 'r-cran-gert', 'r-cran-ggplot2', 'r-cran-gh', 'r-cran-gitcreds', 'r-cran-glue', 'r-cran-gmp', 'r-cran-gtable', 'r-cran-httr2', 'r-cran-ini', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-mathjaxr', 'r-cran-matrix', 'r-cran-memoise', 'r-cran-mgcv', 'r-cran-mpoly', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-openssl', 'r-cran-orthopolynom', 'r-cran-partitions', 'r-cran-pillar', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-plyr', 'r-cran-polynom', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rappdirs', 'r-cran-rbibutils', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rdpack', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-sets', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-sys', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-usethis', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-whisker', 'r-cran-withr', 'r-cran-yaml', 'r-cran-zip', 'readline-common', 'sensible-utils', 'singular-data', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip'] 1m13.9s DUMP: (Reading database ... 5234 files and directories currently installed.) Purging configuration files for ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for fontconfig (2.15.0-1.1) ... Purging configuration files for fontconfig-config (2.15.0-1.1) ... dpkg: warning: while removing fontconfig-config, directory '/etc/fonts/conf.d' not empty so not removed Purging configuration files for fonts-dejavu-core (2.37-8) ... Purging configuration files for fonts-dejavu-mono (2.37-8) ... dpkg: warning: while removing fonts-dejavu-mono, directory '/etc/fonts' not empty so not removed dpkg: warning: ignoring request to remove fonts-glyphicons-halflings which isn't installed dpkg: warning: ignoring request to remove fonts-katex which isn't installed dpkg: warning: ignoring request to remove gdbmtool which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libboost-stacktrace1.83.0 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcliquer1 which isn't installed dpkg: warning: ignoring request to remove libcurl4t64 which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libeantic3 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libflint19 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libfrobby0 which isn't installed dpkg: warning: ignoring request to remove libgc1 which isn't installed dpkg: warning: ignoring request to remove libgdbm6t64 which isn't installed dpkg: warning: ignoring request to remove libgf2x3 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove libgit2-1.7 which isn't installed dpkg: warning: ignoring request to remove libgivaro9 which isn't installed Purging configuration files for libglib2.0-0t64:amd64 (2.80.4-1) ... dpkg: warning: ignoring request to remove libgmpxx4ldbl which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.21.3-3) ... dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libhttp-parser2.9 which isn't installed dpkg: warning: ignoring request to remove libhwloc15 which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjs-bootsidemenu which isn't installed dpkg: warning: ignoring request to remove libjs-bootstrap which isn't installed dpkg: warning: ignoring request to remove libjs-d3 which isn't installed Purging configuration files for libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... dpkg: warning: ignoring request to remove libjs-katex which isn't installed dpkg: warning: ignoring request to remove libjs-nouislider which isn't installed dpkg: warning: ignoring request to remove libjs-three which isn't installed dpkg: warning: ignoring request to remove libjs-underscore which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove liblerc4 which isn't installed dpkg: warning: ignoring request to remove libmathic0v5 which isn't installed dpkg: warning: ignoring request to remove libmathicgb0t64 which isn't installed dpkg: warning: ignoring request to remove libmbedcrypto7t64 which isn't installed dpkg: warning: ignoring request to remove libmbedtls14t64 which isn't installed dpkg: warning: ignoring request to remove libmbedx509-1t64 which isn't installed dpkg: warning: ignoring request to remove libmemtailor0 which isn't installed dpkg: warning: ignoring request to remove libmpfi0 which isn't installed dpkg: warning: ignoring request to remove libmpfr6 which isn't installed dpkg: warning: ignoring request to remove libmps3t64 which isn't installed dpkg: warning: ignoring request to remove libnauty-2.8.8 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnormaliz3 which isn't installed dpkg: warning: ignoring request to remove libntl44 which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpaper-utils which isn't installed Purging configuration files for libpaper1:amd64 (1.1.29+b1) ... dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16t64 which isn't installed dpkg: warning: ignoring request to remove libpsl5t64 which isn't installed Purging configuration files for libpython3.12-minimal:amd64 (3.12.4-3) ... dpkg: warning: ignoring request to remove libpython3.12-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3.12t64 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed Purging configuration files for libreadline8t64:amd64 (8.2-4) ... dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsharpyuv0 which isn't installed dpkg: warning: ignoring request to remove libsingular4m4n0 which isn't installed dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1t64 which isn't installed dpkg: warning: ignoring request to remove libtbb12 which isn't installed dpkg: warning: ignoring request to remove libtbbbind-2-5 which isn't installed dpkg: warning: ignoring request to remove libtbbmalloc2 which isn't installed dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed dpkg: warning: ignoring request to remove libtcmalloc-minimal4t64 which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtiff6 which isn't installed Purging configuration files for libtirpc-common (1.3.4+ds-1.3) ... Purging configuration files for libtirpc3t64:amd64 (1.3.4+ds-1.3) ... dpkg: warning: ignoring request to remove libtk8.6 which isn't installed dpkg: warning: ignoring request to remove libuv1t64 which isn't installed dpkg: warning: ignoring request to remove libwebp7 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxss1 which isn't installed dpkg: warning: ignoring request to remove libxt6t64 which isn't installed dpkg: warning: ignoring request to remove littler which isn't installed dpkg: warning: ignoring request to remove macaulay2 which isn't installed dpkg: warning: ignoring request to remove macaulay2-common which isn't installed Purging configuration files for media-types (10.1.0) ... dpkg: warning: ignoring request to remove net-tools which isn't installed Purging configuration files for netbase (6.4) ... dpkg: warning: ignoring request to remove node-clipboard which isn't installed dpkg: warning: ignoring request to remove normaliz which isn't installed dpkg: warning: ignoring request to remove normaliz-bin which isn't installed Purging configuration files for openssl (3.2.2-1) ... Purging configuration files for r-base-core (4.4.1-1) ... dpkg: warning: ignoring request to remove r-cran-askpass which isn't installed dpkg: warning: ignoring request to remove r-cran-cachem which isn't installed dpkg: warning: ignoring request to remove r-cran-cli which isn't installed dpkg: warning: ignoring request to remove r-cran-clipr which isn't installed dpkg: warning: ignoring request to remove r-cran-colorspace which isn't installed dpkg: warning: ignoring request to remove r-cran-cpp11 which isn't installed dpkg: warning: ignoring request to remove r-cran-crayon which isn't installed dpkg: warning: ignoring request to remove r-cran-credentials which isn't installed dpkg: warning: ignoring request to remove r-cran-curl which isn't installed dpkg: warning: ignoring request to remove r-cran-desc which isn't installed dpkg: warning: ignoring request to remove r-cran-dplyr which isn't installed dpkg: warning: ignoring request to remove r-cran-fansi which isn't installed dpkg: warning: ignoring request to remove r-cran-farver which isn't installed dpkg: warning: ignoring request to remove r-cran-fastmap which isn't installed dpkg: warning: ignoring request to remove r-cran-fs which isn't installed dpkg: warning: ignoring request to remove r-cran-generics which isn't installed dpkg: warning: ignoring request to remove r-cran-gert which isn't installed dpkg: warning: ignoring request to remove r-cran-ggplot2 which isn't installed dpkg: warning: ignoring request to remove r-cran-gh which isn't installed dpkg: warning: ignoring request to remove r-cran-gitcreds which isn't installed dpkg: warning: ignoring request to remove r-cran-glue which isn't installed dpkg: warning: ignoring request to remove r-cran-gmp which isn't installed dpkg: warning: ignoring request to remove r-cran-gtable which isn't installed dpkg: warning: ignoring request to remove r-cran-httr2 which isn't installed dpkg: warning: ignoring request to remove r-cran-ini which isn't installed dpkg: warning: ignoring request to remove r-cran-isoband which isn't installed dpkg: warning: ignoring request to remove r-cran-jsonlite which isn't installed dpkg: warning: ignoring request to remove r-cran-labeling which isn't installed dpkg: warning: ignoring request to remove r-cran-lattice which isn't installed dpkg: warning: ignoring request to remove r-cran-lifecycle which isn't installed dpkg: warning: ignoring request to remove r-cran-littler which isn't installed dpkg: warning: ignoring request to remove r-cran-magrittr which isn't installed dpkg: warning: ignoring request to remove r-cran-mass which isn't installed dpkg: warning: ignoring request to remove r-cran-mathjaxr which isn't installed dpkg: warning: ignoring request to remove r-cran-matrix which isn't installed dpkg: warning: ignoring request to remove r-cran-memoise which isn't installed dpkg: warning: ignoring request to remove r-cran-mgcv which isn't installed dpkg: warning: ignoring request to remove r-cran-mpoly which isn't installed dpkg: warning: ignoring request to remove r-cran-munsell which isn't installed dpkg: warning: ignoring request to remove r-cran-nlme which isn't installed dpkg: warning: ignoring request to remove r-cran-openssl which isn't installed dpkg: warning: ignoring request to remove r-cran-orthopolynom which isn't installed dpkg: warning: ignoring request to remove r-cran-partitions which isn't installed dpkg: warning: ignoring request to remove r-cran-pillar which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgconfig which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgkitten which isn't installed dpkg: warning: ignoring request to remove r-cran-plyr which isn't installed dpkg: warning: ignoring request to remove r-cran-polynom which isn't installed dpkg: warning: ignoring request to remove r-cran-purrr which isn't installed dpkg: warning: ignoring request to remove r-cran-r6 which isn't installed dpkg: warning: ignoring request to remove r-cran-rappdirs which isn't installed dpkg: warning: ignoring request to remove r-cran-rbibutils which isn't installed dpkg: warning: ignoring request to remove r-cran-rcolorbrewer which isn't installed dpkg: warning: ignoring request to remove r-cran-rcpp which isn't installed dpkg: warning: ignoring request to remove r-cran-rdpack which isn't installed dpkg: warning: ignoring request to remove r-cran-rlang which isn't installed dpkg: warning: ignoring request to remove r-cran-rprojroot which isn't installed dpkg: warning: ignoring request to remove r-cran-rstudioapi which isn't installed dpkg: warning: ignoring request to remove r-cran-scales which isn't installed dpkg: warning: ignoring request to remove r-cran-sets which isn't installed dpkg: warning: ignoring request to remove r-cran-stringi which isn't installed dpkg: warning: ignoring request to remove r-cran-stringr which isn't installed dpkg: warning: ignoring request to remove r-cran-sys which isn't installed dpkg: warning: ignoring request to remove r-cran-tibble which isn't installed dpkg: warning: ignoring request to remove r-cran-tidyr which isn't installed dpkg: warning: ignoring request to remove r-cran-tidyselect which isn't installed dpkg: warning: ignoring request to remove r-cran-usethis which isn't installed dpkg: warning: ignoring request to remove r-cran-utf8 which isn't installed dpkg: warning: ignoring request to remove r-cran-vctrs which isn't installed dpkg: warning: ignoring request to remove r-cran-viridislite which isn't installed dpkg: warning: ignoring request to remove r-cran-whisker which isn't installed dpkg: warning: ignoring request to remove r-cran-withr which isn't installed dpkg: warning: ignoring request to remove r-cran-yaml which isn't installed dpkg: warning: ignoring request to remove r-cran-zip which isn't installed Purging configuration files for readline-common (8.2-4) ... dpkg: warning: ignoring request to remove sensible-utils which isn't installed Purging configuration files for singular-data (1:4.4.0-p3+ds-1) ... Purging configuration files for ucf (3.0043+nmu1) ... Purging configuration files for unzip (6.0-28) ... Purging configuration files for x11-common (1:7.7+23.1) ... dpkg: warning: ignoring request to remove xdg-utils which isn't installed dpkg: warning: ignoring request to remove zip which isn't installed 1m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg', '--purge', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-glyphicons-halflings', 'fonts-katex', 'gdbmtool', 'libblas3:amd64', 'libboost-stacktrace1.83.0:amd64', 'libbrotli1:amd64', 'libcairo2:amd64', 'libcliquer1', 'libcurl4t64:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libeantic3:amd64', 'libexpat1:amd64', 'libflint19:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libfrobby0:amd64', 'libgc1:amd64', 'libgdbm6t64:amd64', 'libgf2x3:amd64', 'libgfortran5:amd64', 'libgit2-1.7:amd64', 'libgivaro9:amd64', 'libglib2.0-0t64:amd64', 'libgmpxx4ldbl:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhttp-parser2.9:amd64', 'libhwloc15:amd64', 'libice6:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-bootsidemenu', 'libjs-bootstrap', 'libjs-d3', 'libjs-jquery', 'libjs-katex', 'libjs-nouislider', 'libjs-three', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'libmathic0v5:amd64', 'libmathicgb0t64:amd64', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmemtailor0:amd64', 'libmpfi0:amd64', 'libmpfr6:amd64', 'libmps3t64:amd64', 'libnauty-2.8.8:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnormaliz3:amd64', 'libntl44:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsharpyuv0:amd64', 'libsingular4m4n0:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libtcmalloc-minimal4t64:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libuv1t64:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'littler', 'macaulay2', 'macaulay2-common', 'media-types', 'net-tools', 'netbase', 'node-clipboard', 'normaliz', 'normaliz-bin', 'openssl', 'r-base-core', 'r-cran-askpass', 'r-cran-cachem', 'r-cran-cli', 'r-cran-clipr', 'r-cran-colorspace', 'r-cran-cpp11', 'r-cran-crayon', 'r-cran-credentials', 'r-cran-curl', 'r-cran-desc', 'r-cran-dplyr', 'r-cran-fansi', 'r-cran-farver', 'r-cran-fastmap', 'r-cran-fs', 'r-cran-generics', 'r-cran-gert', 'r-cran-ggplot2', 'r-cran-gh', 'r-cran-gitcreds', 'r-cran-glue', 'r-cran-gmp', 'r-cran-gtable', 'r-cran-httr2', 'r-cran-ini', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-mathjaxr', 'r-cran-matrix', 'r-cran-memoise', 'r-cran-mgcv', 'r-cran-mpoly', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-openssl', 'r-cran-orthopolynom', 'r-cran-partitions', 'r-cran-pillar', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-plyr', 'r-cran-polynom', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rappdirs', 'r-cran-rbibutils', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rdpack', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-sets', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-sys', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-usethis', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-whisker', 'r-cran-withr', 'r-cran-yaml', 'r-cran-zip', 'readline-common', 'sensible-utils', 'singular-data', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip'] 1m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg', '--purge', 'r-cran-m2r'] 1m13.9s DUMP: dpkg: warning: ignoring request to remove r-cran-m2r which isn't installed 1m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg', '--purge', 'r-cran-m2r'] 1m13.9s INFO: Running scripts post_purge 1m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_purge_exceptions'] 1m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_purge_exceptions'] 1m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg', '--purge', '--pending'] 1m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg', '--purge', '--pending'] 1m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg', '--remove', '--pending'] 1m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg', '--remove', '--pending'] 1m13.9s INFO: Running scripts post_test 1m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_test_exceptions'] 1m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'tmp/scripts/post_test_exceptions'] 1m13.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 1m14.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 1m14.7s ERROR: WARN: Broken symlinks: /etc/fonts/conf.d/70-no-bitmaps-except-emoji.conf -> /usr/share/fontconfig/conf.avail/70-no-bitmaps-except-emoji.conf 1m14.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg-divert', '--list'] 1m14.7s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 1m14.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'dpkg-divert', '--list'] 1m14.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', 'clean'] 1m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn', 'apt-get', 'clean'] 1m14.8s DEBUG: Recording chroot state 1m15.3s INFO: Warning: Package purging left files on system: /etc/fonts/ owned by: fontconfig-config, fonts-dejavu-core, fonts-dejavu-mono /etc/fonts/conf.d/ owned by: fontconfig-config, fonts-dejavu-core, fonts-dejavu-mono /etc/fonts/conf.d/70-no-bitmaps-except-emoji.conf -> /usr/share/fontconfig/conf.avail/70-no-bitmaps-except-emoji.conf not owned 1m15.3s INFO: PASS: Installation and purging test. 1m15.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/shm'] 1m15.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/shm'] 1m15.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/console'] 1m15.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/console'] 1m15.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/ptmx'] 1m15.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/ptmx'] 1m15.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/pts'] 1m15.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/dev/pts'] 1m15.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/proc'] 1m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn/proc'] 1m15.7s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 1m15.8s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpmhs9blkn'] 1m15.8s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpmhs9blkn 1m15.8s INFO: PASS: All tests. 1m15.8s INFO: piuparts run ends. ret=0 End: 2024-07-30 07:36:35 GMT