Start: 2026-03-17 05:19:43 GMT Package: libcctbx-dev Source: cctbx Version: 2026.2+ds2+~3.27.0+ds1-1 Installed-Size: 8641 Maintainer: Debian Science Maintainers Architecture: amd64 Depends: libann-cctbx-dev, libboost-python-dev, libccp4-dev, libcctbx0 (= 2026.2+ds2+~3.27.0+ds1-1) Description: Computational Crystallography Toolbox - headers Homepage: https://github.com/cctbx/cctbx_project Description-md5: 80927143262a36c2492844dcd04ad8bd Tag: devel::lang:c++, devel::library, implemented-in::c++, role::devel-lib Section: devel Priority: optional Filename: pool/main/c/cctbx/libcctbx-dev_2026.2+ds2+~3.27.0+ds1-1_amd64.deb Size: 1165320 MD5sum: 846961a6b93d5fa33f4f19d166c2f4ca SHA256: 68618481781d8f52eec0c8637ef1532dac9e6a04dcd9bec3e2352945863769f0 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1' 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202508211856~1.6.0-10-gffba2cce starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1' 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 6.1.0-44-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.164-1 (2026-03-09) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp6t0hsf3r 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp6t0hsf3r 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/pts'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/pts'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/ptmx'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/console'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/console'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/shm'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/shm'] 0m0.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.4s DEBUG: Created policy-rc.d and chmodded it. 0m0.4s DEBUG: Created resolv.conf. 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp6t0hsf3r/tmp/scripts/ 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts-leftovers to /srv/piuparts.debian.org/tmp/tmp6t0hsf3r/tmp/scripts/ 0m0.4s INFO: Running scripts post_chroot_unpack 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'update'] 0m4.5s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [187 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.4 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7537 kB] Fetched 18.1 MB in 3s (5569 kB/s) Reading package lists... 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'update'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-yf', 'dist-upgrade'] 0m5.9s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: gcc-16-base libgcc-s1 libstdc++6 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 875 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 gcc-16-base amd64 16-20260315-1 [35.4 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 16-20260315-1 [765 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 16-20260315-1 [74.1 kB] Fetched 875 kB in 0s (2115 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4900 files and directories currently installed.) Preparing to unpack .../gcc-16-base_16-20260315-1_amd64.deb ... Unpacking gcc-16-base:amd64 (16-20260315-1) over (16-20260308-1) ... Setting up gcc-16-base:amd64 (16-20260315-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4900 files and directories currently installed.) Preparing to unpack .../libstdc++6_16-20260315-1_amd64.deb ... Unpacking libstdc++6:amd64 (16-20260315-1) over (16-20260308-1) ... Setting up libstdc++6:amd64 (16-20260315-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4900 files and directories currently installed.) Preparing to unpack .../libgcc-s1_16-20260315-1_amd64.deb ... Unpacking libgcc-s1:amd64 (16-20260315-1) over (16-20260308-1) ... Setting up libgcc-s1:amd64 (16-20260315-1) ... Processing triggers for libc-bin (2.42-13) ... 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-yf', 'dist-upgrade'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s DUMP: 2d6b0d68c0d03f020ca52e207ade78f5 - 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s INFO: Running scripts post_setup 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_dummy_users'] 0m7.3s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_dummy_users'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_fake-essential'] 0m9.2s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Reading state information... init-system-helpers is already the newest version (1.69). Solving dependencies... The following additional packages will be installed: libncursesw6 libproc2-0 libtext-charwidth-perl libtext-wrapi18n-perl procps sensible-utils ucf Suggested packages: dbconfig-mysql | dbconfig-pgsql | dbconfig-sqlite3 | dbconfig-no-thanks Recommended packages: libgpm2 psmisc linux-sysctl-defaults The following NEW packages will be installed: dbconfig-common libncursesw6 libproc2-0 libtext-charwidth-perl libtext-wrapi18n-perl procps sensible-utils ucf 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. Need to get 1777 kB of archives. After this operation, 4988 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.6+20251231-1 [137 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libproc2-0 amd64 2:4.0.4-9+b1 [66.1 kB] Get:3 http://deb.debian.org/debian sid/main amd64 procps amd64 2:4.0.4-9+b1 [883 kB] Get:4 http://deb.debian.org/debian sid/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libtext-charwidth-perl amd64 0.04-11+b5 [9532 B] Get:6 http://deb.debian.org/debian sid/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:7 http://deb.debian.org/debian sid/main amd64 ucf all 3.0053 [41.9 kB] Get:8 http://deb.debian.org/debian sid/main amd64 dbconfig-common all 2.0.25 [604 kB] Preconfiguring packages ... Fetched 1777 kB in 1s (3530 kB/s) Selecting previously unselected package libncursesw6:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4900 files and directories currently installed.) Preparing to unpack .../0-libncursesw6_6.6+20251231-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.6+20251231-1) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../1-libproc2-0_2%3a4.0.4-9+b1_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-9+b1) ... Selecting previously unselected package procps. Preparing to unpack .../2-procps_2%3a4.0.4-9+b1_amd64.deb ... Unpacking procps (2:4.0.4-9+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../3-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libtext-charwidth-perl:amd64. Preparing to unpack .../4-libtext-charwidth-perl_0.04-11+b5_amd64.deb ... Unpacking libtext-charwidth-perl:amd64 (0.04-11+b5) ... Selecting previously unselected package libtext-wrapi18n-perl. Preparing to unpack .../5-libtext-wrapi18n-perl_0.06-10_all.deb ... Unpacking libtext-wrapi18n-perl (0.06-10) ... Selecting previously unselected package ucf. Preparing to unpack .../6-ucf_3.0053_all.deb ... Moving old data out of the way Unpacking ucf (3.0053) ... Selecting previously unselected package dbconfig-common. Preparing to unpack .../7-dbconfig-common_2.0.25_all.deb ... Unpacking dbconfig-common (2.0.25) ... Setting up libtext-charwidth-perl:amd64 (0.04-11+b5) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up libproc2-0:amd64 (2:4.0.4-9+b1) ... Setting up libncursesw6:amd64 (6.6+20251231-1) ... Setting up sensible-utils (0.0.26) ... Setting up procps (2:4.0.4-9+b1) ... Setting up ucf (3.0053) ... Setting up dbconfig-common (2.0.25) ... Creating config file /etc/dbconfig-common/config with new version Processing triggers for libc-bin (2.42-13) ... 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_fake-essential'] 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_forbid_home'] 0m9.2s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_forbid_home'] 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.2s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_minimize'] 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_minimize'] 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_zz_backports'] 0m9.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_setup_zz_backports'] 0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'clean'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'clean'] 0m9.3s DEBUG: Recording chroot state 0m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.8s DUMP: install ok installed apt apt 3.1.16 install ok installed base-files base-files 14 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-2 install ok installed bsdutils bsdutils 1:2.41.3-4 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed dbconfig-common dbconfig-common 2.0.25 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.23.2 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.7 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-16-base:amd64 gcc-16-base 16-20260315-1 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.13-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69 install ok installed libacl1:amd64 libacl1 2.3.2-3 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.1.16 install ok installed libattr1:amd64 libattr1 1:2.5.2-4 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b1 install ok installed libblkid1:amd64 libblkid1 2.41.3-4 install ok installed libbsd0:amd64 libbsd0 0.12.2-2+b1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b1 install ok installed libc-bin libc-bin 2.42-13 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.42-13 install ok installed libc6:amd64 libc6 2.42-13 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.1-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.282+b2 install ok installed libgcc-s1:amd64 libgcc-s1 16-20260315-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b1 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-8 install ok installed liblzma5:amd64 liblzma5 5.8.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2+b2 install ok installed libmount1:amd64 libmount1 2.41.3-4 install ok installed libncursesw6:amd64 libncursesw6 6.6+20251231-1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-5+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-5+b1 install ok installed libpam-runtime libpam-runtime 1.7.0-5 install ok installed libpam0g:amd64 libpam0g 1.7.0-5+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.46-1+b1 install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-9+b1 install ok installed libseccomp2:amd64 libseccomp2 2.6.0-2+b1 install ok installed libselinux1:amd64 libselinux1 3.9-4+b1 install ok installed libsemanage-common libsemanage-common 3.9-1 install ok installed libsemanage2:amd64 libsemanage2 3.9-1+b1 install ok installed libsepol2:amd64 libsepol2 3.9-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.41.3-4 install ok installed libssl3t64:amd64 libssl3t64 3.6.1-2 install ok installed libstdc++6:amd64 libstdc++6 16-20260315-1 install ok installed libsystemd0:amd64 libsystemd0 260~rc4-1 install ok installed libtext-charwidth-perl:amd64 libtext-charwidth-perl 0.04-11+b5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-10 install ok installed libtinfo6:amd64 libtinfo6 6.6+20251231-1 install ok installed libudev1:amd64 libudev1 260~rc4-1 install ok installed libuuid1:amd64 libuuid1 2.41.3-4 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-3+b1 install ok installed login login 1:4.16.0-2+really2.41.3-4 install ok installed login.defs login.defs 1:4.19.3-1 install ok installed mawk mawk 1.3.4.20260302-1 install ok installed mount mount 2.41.3-4 install ok installed ncurses-base ncurses-base 6.6+20251231-1 install ok installed ncurses-bin ncurses-bin 6.6+20251231-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.1-2 install ok installed passwd passwd 1:4.19.3-1 install ok installed perl-base perl-base 5.40.1-7 install ok installed procps procps 2:4.0.4-9+b1 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.26 install ok installed sqv sqv 1.3.0-5 install ok installed sysvinit-utils sysvinit-utils 3.15-6 install ok installed tar tar 1.35+dfsg-4 install ok installed tzdata tzdata 2026a-1 install ok installed ucf ucf 3.0053 install ok installed util-linux util-linux 2.41.3-4 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-3 0m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-divert', '--list'] 0m9.8s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-divert', '--list'] 0m9.8s INFO: Running scripts is_testable 0m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/is_testable_uninstallable'] 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/is_testable_uninstallable'] 0m9.9s INFO: apt-cache does not know about any of the requested packages 0m9.9s INFO: Running scripts pre_test 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_test_exceptions'] 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_test_exceptions'] 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_test_root_password'] 0m9.9s DUMP: New password: Retype new password: passwd: password updated successfully 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_test_root_password'] 0m9.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m10.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m10.7s DEBUG: No broken symlinks as far as we can find. 0m10.7s INFO: Running scripts pre_install 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_database-server'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_database-server'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_exceptions'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_exceptions'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_extras'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_extras'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'show', '--no-all-versions', 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1'] 0m11.7s DUMP: Package: libcctbx-dev Source: cctbx Version: 2026.2+ds2+~3.27.0+ds1-1 Installed-Size: 8641 Maintainer: Debian Science Maintainers Architecture: amd64 Depends: libann-cctbx-dev, libboost-python-dev, libccp4-dev, libcctbx0 (= 2026.2+ds2+~3.27.0+ds1-1) Description-en: Computational Crystallography Toolbox - headers Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . This package provide everythings needed to link against the cctbx libraries. Description-md5: 80927143262a36c2492844dcd04ad8bd Homepage: https://github.com/cctbx/cctbx_project Tag: devel::lang:c++, devel::library, implemented-in::c++, role::devel-lib Section: devel Priority: optional Filename: pool/main/c/cctbx/libcctbx-dev_2026.2+ds2+~3.27.0+ds1-1_amd64.deb Size: 1165320 MD5sum: 846961a6b93d5fa33f4f19d166c2f4ca SHA256: 68618481781d8f52eec0c8637ef1532dac9e6a04dcd9bec3e2352945863769f0 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'show', '--no-all-versions', 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1'] 0m11.7s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: piuparts developers team Depends: libann-cctbx-dev, libboost-python-dev, libccp4-dev, libcctbx0 (= 2026.2+ds2+~3.27.0+ds1-1) Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed 0m11.7s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmps1_dwqmz/piuparts-depends-dummy'] 0m11.7s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmps1_dwqmz/piuparts-depends-dummy.deb'. 0m11.7s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmps1_dwqmz/piuparts-depends-dummy'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m11.7s DUMP: 3.1.16 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m11.7s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmps1_dwqmz/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmp6t0hsf3r/tmp 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 0m26.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: gcc-15-base icu-devtools libann-cctbx-dev libann-cctbx0 libasan8 libatomic1 libboost-container1.90-dev libboost-container1.90.0 libboost-exception1.90-dev libboost-graph1.90-dev libboost-graph1.90.0 libboost-python-dev libboost-python1.90-dev libboost-python1.90.0 libboost-regex1.90-dev libboost-regex1.90.0 libboost-serialization1.90-dev libboost-serialization1.90.0 libboost-test1.90-dev libboost-test1.90.0 libboost1.90-dev libbrotli1 libc-dev-bin libc6-dev libcbf1t64 libccp4-data libccp4-dev libccp4c0t64 libccp4f0t64 libcctbx0 libcom-err2 libcurl4t64 libexpat1 libexpat1-dev libffi8 libgcc-15-dev libgfortran5 libgnutls30t64 libgomp1 libgssapi-krb5-2 libhdf5-310 libhwasan0 libicu-dev libicu78 libidn2-0 libitm1 libjs-sphinxdoc libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap2 liblsan0 libmmdb2-0 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libp11-kit0 libpsl5t64 libpython3-dev libpython3-stdlib libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libquadmath0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libstdc++-15-dev libsz2 libtasn1-6 libtsan2 libubsan1 libunistring5 linux-libc-dev media-types netbase python3 python3-dev python3-minimal python3.13 python3.13-dev python3.13-minimal readline-common rpcsvc-proto zlib1g-dev Suggested packages: graphviz libboost1.90-doc gccxml libboost-atomic1.90-dev libboost-chrono1.90-dev libboost-context1.90-dev libboost-contract1.90-dev libboost-coroutine1.90-dev libboost-date-time1.90-dev libboost-fiber1.90-dev libboost-filesystem1.90-dev libboost-graph-parallel1.90-dev libboost-iostreams1.90-dev libboost-json1.90-dev libboost-locale1.90-dev libboost-log1.90-dev libboost-math1.90-dev libboost-mpi-python1.90-dev libboost-mpi1.90-dev libboost-nowide1.90-dev libboost-numpy1.90-dev libboost-program-options1.90-dev libboost-random1.90-dev libboost-stacktrace1.90-dev libboost-thread1.90-dev libboost-timer1.90-dev libboost-type-erasure1.90-dev libboost-url1.90-dev libboost-wave1.90-dev libboost1.90-tools-dev libmpfrc++-dev libntl-dev libc-devtools glibc-doc manpages-dev gnutls-bin krb5-doc krb5-user icu-doc libstdc++-15-doc python3-doc python3-tk python3-venv python3.13-venv python3.13-doc binutils binfmt-support readline-doc Recommended packages: manpages manpages-dev ca-certificates krb5-locales libldap-common publicsuffix libsasl2-modules The following NEW packages will be installed: gcc-15-base icu-devtools libann-cctbx-dev libann-cctbx0 libasan8 libatomic1 libboost-container1.90-dev libboost-container1.90.0 libboost-exception1.90-dev libboost-graph1.90-dev libboost-graph1.90.0 libboost-python-dev libboost-python1.90-dev libboost-python1.90.0 libboost-regex1.90-dev libboost-regex1.90.0 libboost-serialization1.90-dev libboost-serialization1.90.0 libboost-test1.90-dev libboost-test1.90.0 libboost1.90-dev libbrotli1 libc-dev-bin libc6-dev libcbf1t64 libccp4-data libccp4-dev libccp4c0t64 libccp4f0t64 libcctbx0 libcom-err2 libcurl4t64 libexpat1 libexpat1-dev libffi8 libgcc-15-dev libgfortran5 libgnutls30t64 libgomp1 libgssapi-krb5-2 libhdf5-310 libhwasan0 libicu-dev libicu78 libidn2-0 libitm1 libjs-sphinxdoc libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap2 liblsan0 libmmdb2-0 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libp11-kit0 libpsl5t64 libpython3-dev libpython3-stdlib libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libquadmath0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libstdc++-15-dev libsz2 libtasn1-6 libtsan2 libubsan1 libunistring5 linux-libc-dev media-types netbase piuparts-depends-dummy python3 python3-dev python3-minimal python3.13 python3.13-dev python3.13-minimal readline-common rpcsvc-proto zlib1g-dev 0 upgraded, 92 newly installed, 0 to remove and 0 not upgraded. Need to get 83.7 MB/83.7 MB of archives. After this operation, 501 MB of additional disk space will be used. 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sid/main amd64 libgomp1 amd64 16-20260315-1 [151 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libitm1 amd64 16-20260315-1 [26.9 kB] Get:25 http://deb.debian.org/debian sid/main amd64 liblsan0 amd64 16-20260315-1 [1281 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libtsan2 amd64 16-20260315-1 [2572 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libubsan1 amd64 16-20260315-1 [1136 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libhwasan0 amd64 16-20260315-1 [1580 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 16-20260315-1 [147 kB] Get:30 http://deb.debian.org/debian sid/main amd64 libgcc-15-dev amd64 15.2.0-15 [2719 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libc-dev-bin amd64 2.42-13 [61.5 kB] Get:32 http://deb.debian.org/debian sid/main amd64 linux-libc-dev all 6.19.8-1 [1949 kB] Get:33 http://deb.debian.org/debian sid/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libc6-dev amd64 2.42-13 [2016 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libstdc++-15-dev amd64 15.2.0-15 [2777 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libboost1.90-dev amd64 1.90.0-5+b1 [11.3 MB] Get:37 http://deb.debian.org/debian sid/main amd64 libboost-container1.90.0 amd64 1.90.0-5+b1 [252 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libboost-container1.90-dev amd64 1.90.0-5+b1 [257 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libboost-exception1.90-dev amd64 1.90.0-5+b1 [222 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libboost-graph1.90.0 amd64 1.90.0-5+b1 [355 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libboost-regex1.90.0 amd64 1.90.0-5+b1 [327 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libicu-dev amd64 78.2-2 [11.1 MB] Get:43 http://deb.debian.org/debian sid/main amd64 libboost-regex1.90-dev amd64 1.90.0-5+b1 [343 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libboost-serialization1.90.0 amd64 1.90.0-5+b1 [326 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libboost-serialization1.90-dev amd64 1.90.0-5+b1 [364 kB] Get:46 http://deb.debian.org/debian sid/main amd64 libboost-test1.90.0 amd64 1.90.0-5+b1 [465 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libboost-test1.90-dev amd64 1.90.0-5+b1 [534 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libboost-graph1.90-dev amd64 1.90.0-5+b1 [378 kB] Get:49 http://deb.debian.org/debian sid/main amd64 libboost-python1.90.0 amd64 1.90.0-5+b1 [344 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libpython3.13 amd64 3.13.12-1 [2187 kB] Get:51 http://deb.debian.org/debian sid/main amd64 libexpat1-dev amd64 2.7.4-1 [169 kB] Get:52 http://deb.debian.org/debian sid/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-3 [919 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libpython3.13-dev amd64 3.13.12-1 [5298 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libpython3-dev amd64 3.13.9-3 [10.8 kB] Get:55 http://deb.debian.org/debian sid/main amd64 python3.13-dev amd64 3.13.12-1 [504 kB] Get:56 http://deb.debian.org/debian sid/main amd64 libjs-sphinxdoc all 8.2.3-12 [27.9 kB] Get:57 http://deb.debian.org/debian sid/main amd64 python3-dev amd64 3.13.9-3 [26.0 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libboost-python1.90-dev amd64 1.90.0-5+b1 [359 kB] Get:59 http://deb.debian.org/debian sid/main amd64 libboost-python-dev amd64 1.90.0.1 [3120 B] Get:60 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.2.0-3 [320 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libnghttp3-9 amd64 1.15.0-1 [67.2 kB] Get:62 http://deb.debian.org/debian sid/main amd64 libngtcp2-16 amd64 1.21.0-1 [136 kB] Get:63 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.22.1-2 [33.1 kB] Get:64 http://deb.debian.org/debian sid/main amd64 libcom-err2 amd64 1.47.4-1 [19.2 kB] Get:65 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.22.1-2 [81.1 kB] Get:66 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-6+b1 [9784 B] Get:67 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.22.1-2 [337 kB] Get:68 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.22.1-2 [139 kB] Get:69 http://deb.debian.org/debian sid/main amd64 libunistring5 amd64 1.4.2-1 [480 kB] Get:70 http://deb.debian.org/debian sid/main amd64 libidn2-0 amd64 2.3.8-4+b1 [110 kB] Get:71 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-10 [19.8 kB] Get:72 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-10 [57.8 kB] Get:73 http://deb.debian.org/debian sid/main amd64 libldap2 amd64 2.6.10+dfsg-1+b1 [195 kB] Get:74 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.68.0-2 [79.2 kB] Get:75 http://deb.debian.org/debian sid/main amd64 libngtcp2-crypto-ossl0 amd64 1.21.0-1 [25.9 kB] Get:76 http://deb.debian.org/debian sid/main amd64 libpsl5t64 amd64 0.21.2-1.1+b2 [59.8 kB] Get:77 http://deb.debian.org/debian sid/main amd64 libp11-kit0 amd64 0.26.2-2 [470 kB] Get:78 http://deb.debian.org/debian sid/main amd64 libtasn1-6 amd64 4.21.0-2 [50.4 kB] Get:79 http://deb.debian.org/debian sid/main amd64 libgnutls30t64 amd64 3.8.12-3 [1520 kB] Get:80 http://deb.debian.org/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-3+b1 [60.7 kB] Get:81 http://deb.debian.org/debian sid/main amd64 libssh2-1t64 amd64 1.11.1-1+b1 [245 kB] Get:82 http://deb.debian.org/debian sid/main amd64 libcurl4t64 amd64 8.19.0-1 [408 kB] Get:83 http://deb.debian.org/debian sid/main amd64 libsz2 amd64 1.1.6-1 [18.8 kB] Get:84 http://deb.debian.org/debian sid/main amd64 libhdf5-310 amd64 1.14.6+repack-2 [1360 kB] Get:85 http://deb.debian.org/debian sid/main amd64 libcbf1t64 amd64 0.9.7+dfsg1-5.1+b1 [365 kB] Get:86 http://deb.debian.org/debian sid/main amd64 libccp4-data all 8.0.0-5 [62.5 kB] Get:87 http://deb.debian.org/debian sid/main amd64 libccp4c0t64 amd64 8.0.0-5 [97.6 kB] Get:88 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 16-20260315-1 [884 kB] Get:89 http://deb.debian.org/debian sid/main amd64 libmmdb2-0 amd64 2.0.22-1+b3 [346 kB] Get:90 http://deb.debian.org/debian sid/main amd64 libccp4f0t64 amd64 8.0.0-5 [221 kB] Get:91 http://deb.debian.org/debian sid/main amd64 libccp4-dev amd64 8.0.0-5 [43.0 kB] Get:92 http://deb.debian.org/debian sid/main amd64 libcctbx0 amd64 2026.2+ds2+~3.27.0+ds1-1 [2281 kB] Fetched 83.7 MB in 3s (29.3 MB/s) Selecting previously unselected package libexpat1:amd64. 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../6-libsqlite3-0_3.46.1-9+b1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.1-9+b1) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.12-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.12-1) ... 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Preparing to unpack .../57-libsasl2-2_2.1.28+dfsg1-10_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-10) ... Selecting previously unselected package libldap2:amd64. Preparing to unpack .../58-libldap2_2.6.10+dfsg-1+b1_amd64.deb ... Unpacking libldap2:amd64 (2.6.10+dfsg-1+b1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../59-libnghttp2-14_1.68.0-2_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.68.0-2) ... Selecting previously unselected package libngtcp2-crypto-ossl0:amd64. Preparing to unpack .../60-libngtcp2-crypto-ossl0_1.21.0-1_amd64.deb ... Unpacking libngtcp2-crypto-ossl0:amd64 (1.21.0-1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../61-libpsl5t64_0.21.2-1.1+b2_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1+b2) ... Selecting previously unselected package libp11-kit0:amd64. Preparing to unpack .../62-libp11-kit0_0.26.2-2_amd64.deb ... Unpacking libp11-kit0:amd64 (0.26.2-2) ... Selecting previously unselected package libtasn1-6:amd64. Preparing to unpack .../63-libtasn1-6_4.21.0-2_amd64.deb ... Unpacking libtasn1-6:amd64 (4.21.0-2) ... Selecting previously unselected package libgnutls30t64:amd64. Preparing to unpack .../64-libgnutls30t64_3.8.12-3_amd64.deb ... Unpacking libgnutls30t64:amd64 (3.8.12-3) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../65-librtmp1_2.4+20151223.gitfa8646d.1-3+b1_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-3+b1) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../66-libssh2-1t64_1.11.1-1+b1_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.1-1+b1) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../67-libcurl4t64_8.19.0-1_amd64.deb ... Unpacking libcurl4t64:amd64 (8.19.0-1) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../68-libsz2_1.1.6-1_amd64.deb ... Unpacking libsz2:amd64 (1.1.6-1) ... Selecting previously unselected package libhdf5-310:amd64. Preparing to unpack .../69-libhdf5-310_1.14.6+repack-2_amd64.deb ... Unpacking libhdf5-310:amd64 (1.14.6+repack-2) ... Selecting previously unselected package libcbf1t64:amd64. Preparing to unpack .../70-libcbf1t64_0.9.7+dfsg1-5.1+b1_amd64.deb ... Unpacking libcbf1t64:amd64 (0.9.7+dfsg1-5.1+b1) ... Selecting previously unselected package libccp4-data. Preparing to unpack .../71-libccp4-data_8.0.0-5_all.deb ... Unpacking libccp4-data (8.0.0-5) ... Selecting previously unselected package libccp4c0t64:amd64. Preparing to unpack .../72-libccp4c0t64_8.0.0-5_amd64.deb ... Unpacking libccp4c0t64:amd64 (8.0.0-5) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../73-libgfortran5_16-20260315-1_amd64.deb ... Unpacking libgfortran5:amd64 (16-20260315-1) ... Selecting previously unselected package libmmdb2-0:amd64. Preparing to unpack .../74-libmmdb2-0_2.0.22-1+b3_amd64.deb ... Unpacking libmmdb2-0:amd64 (2.0.22-1+b3) ... Selecting previously unselected package libccp4f0t64:amd64. Preparing to unpack .../75-libccp4f0t64_8.0.0-5_amd64.deb ... Unpacking libccp4f0t64:amd64 (8.0.0-5) ... Selecting previously unselected package libccp4-dev:amd64. Preparing to unpack .../76-libccp4-dev_8.0.0-5_amd64.deb ... Unpacking libccp4-dev:amd64 (8.0.0-5) ... Selecting previously unselected package libcctbx0. Preparing to unpack .../77-libcctbx0_2026.2+ds2+~3.27.0+ds1-1_amd64.deb ... Unpacking libcctbx0 (2026.2+ds2+~3.27.0+ds1-1) ... Selecting previously unselected package piuparts-depends-dummy. Preparing to unpack .../78-piuparts-depends-dummy.deb ... Unpacking piuparts-depends-dummy (0.invalid.0) ... Setting up media-types (14.0.0) ... Setting up libboost-test1.90.0:amd64 (1.90.0-5+b1) ... Setting up libkeyutils1:amd64 (1.6.3-6+b1) ... Setting up libboost-graph1.90.0:amd64 (1.90.0-5+b1) ... Setting up libmmdb2-0:amd64 (2.0.22-1+b3) ... Setting up libbrotli1:amd64 (1.2.0-3) ... Setting up libsqlite3-0:amd64 (3.46.1-9+b1) ... Setting up libnghttp2-14:amd64 (1.68.0-2) ... Setting up linux-libc-dev (6.19.8-1) ... Setting up libcom-err2:amd64 (1.47.4-1) ... Setting up libccp4-data (8.0.0-5) ... Setting up libgomp1:amd64 (16-20260315-1) ... Setting up libkrb5support0:amd64 (1.22.1-2) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-10) ... Setting up libicu78:amd64 (78.2-2) ... Setting up libboost-python1.90.0 (1.90.0-5+b1) ... Setting up rpcsvc-proto (1.4.3-1) ... Setting up libann-cctbx0 (1.1.2+doc-9+b1) ... Setting up libquadmath0:amd64 (16-20260315-1) ... Setting up libunistring5:amd64 (1.4.2-1) ... Setting up libatomic1:amd64 (16-20260315-1) ... Setting up icu-devtools (78.2-2) ... Setting up libk5crypto3:amd64 (1.22.1-2) ... Setting up libjs-sphinxdoc (8.2.3-12) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-10) ... Setting up libgfortran5:amd64 (16-20260315-1) ... Setting up libnghttp3-9:amd64 (1.15.0-1) ... Setting up libubsan1:amd64 (16-20260315-1) ... Setting up libffi8:amd64 (3.5.2-3+b1) ... Setting up libhwasan0:amd64 (16-20260315-1) ... Setting up libccp4c0t64:amd64 (8.0.0-5) ... Setting up libasan8:amd64 (16-20260315-1) ... Setting up libtasn1-6:amd64 (4.21.0-2) ... Setting up netbase (6.5) ... Setting up libngtcp2-16:amd64 (1.21.0-1) ... Setting up libboost-serialization1.90.0:amd64 (1.90.0-5+b1) ... Setting up libkrb5-3:amd64 (1.22.1-2) ... Setting up libboost-regex1.90.0:amd64 (1.90.0-5+b1) ... Setting up libssh2-1t64:amd64 (1.11.1-1+b1) ... Setting up libtsan2:amd64 (16-20260315-1) ... Setting up libc-dev-bin (2.42-13) ... Setting up gcc-15-base:amd64 (15.2.0-15) ... Setting up readline-common (8.3-4) ... Setting up libboost-container1.90.0:amd64 (1.90.0-5+b1) ... Setting up libldap2:amd64 (2.6.10+dfsg-1+b1) ... Setting up liblsan0:amd64 (16-20260315-1) ... Setting up libsz2:amd64 (1.1.6-1) ... Setting up libitm1:amd64 (16-20260315-1) ... Setting up libann-cctbx-dev (1.1.2+doc-9+b1) ... Setting up libgcc-15-dev:amd64 (15.2.0-15) ... Setting up libidn2-0:amd64 (2.3.8-4+b1) ... Setting up libccp4f0t64:amd64 (8.0.0-5) ... Setting up libp11-kit0:amd64 (0.26.2-2) ... Setting up libgssapi-krb5-2:amd64 (1.22.1-2) ... Setting up libngtcp2-crypto-ossl0:amd64 (1.21.0-1) ... Setting up libreadline8t64:amd64 (8.3-4) ... Setting up libc6-dev:amd64 (2.42-13) ... Setting up libpython3.13-stdlib:amd64 (3.13.12-1) ... Setting up libicu-dev:amd64 (78.2-2) ... Setting up libpython3-stdlib:amd64 (3.13.9-3) ... Setting up libpython3.13:amd64 (3.13.12-1) ... Setting up libgnutls30t64:amd64 (3.8.12-3) ... Setting up libccp4-dev:amd64 (8.0.0-5) ... Setting up python3.13 (3.13.12-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b2) ... Setting up python3 (3.13.9-3) ... Setting up libstdc++-15-dev:amd64 (15.2.0-15) ... Setting up libexpat1-dev:amd64 (2.7.4-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-3+b1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-3) ... Setting up libboost1.90-dev:amd64 (1.90.0-5+b1) ... Setting up libboost-serialization1.90-dev:amd64 (1.90.0-5+b1) ... Setting up libcurl4t64:amd64 (8.19.0-1) ... Setting up libboost-container1.90-dev:amd64 (1.90.0-5+b1) ... Setting up libpython3.13-dev:amd64 (3.13.12-1) ... Setting up libboost-exception1.90-dev:amd64 (1.90.0-5+b1) ... Setting up libhdf5-310:amd64 (1.14.6+repack-2) ... Setting up libboost-regex1.90-dev:amd64 (1.90.0-5+b1) ... Setting up libboost-test1.90-dev:amd64 (1.90.0-5+b1) ... Setting up libpython3-dev:amd64 (3.13.9-3) ... Setting up libcbf1t64:amd64 (0.9.7+dfsg1-5.1+b1) ... Setting up python3.13-dev (3.13.12-1) ... Setting up python3-dev (3.13.9-3) ... Setting up libboost-graph1.90-dev:amd64 (1.90.0-5+b1) ... Setting up libcctbx0 (2026.2+ds2+~3.27.0+ds1-1) ... Setting up libboost-python1.90-dev (1.90.0-5+b1) ... Setting up libboost-python-dev (1.90.0.1) ... Setting up piuparts-depends-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.42-13) ... 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 0m26.7s INFO: Installation of ['./tmp/piuparts-depends-dummy.deb'] ok 0m26.7s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmp6t0hsf3r/./tmp/piuparts-depends-dummy.deb 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m26.7s DUMP: piuparts-depends-dummy install ok installed 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m26.7s DUMP: (Reading database ... 29350 files and directories currently installed.) Removing piuparts-depends-dummy (0.invalid.0) ... 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'clean'] 0m26.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'clean'] 0m26.8s DEBUG: Recording chroot state 0m27.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m29.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m31.3s DEBUG: No broken symlinks as far as we can find. 0m31.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy'] 0m32.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m32.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy'] 0m32.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy', 'libcctbx-dev'] 0m32.2s DUMP: libcctbx-dev: Installed: (none) Candidate: 2026.2+ds2+~3.27.0+ds1-1 Version table: 2026.2+ds2+~3.27.0+ds1-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m32.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy', 'libcctbx-dev'] 0m32.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-y', 'install', 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1'] 0m33.6s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following NEW packages will be installed: libcctbx-dev 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 1165 kB of archives. After this operation, 8848 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libcctbx-dev amd64 2026.2+ds2+~3.27.0+ds1-1 [1165 kB] Fetched 1165 kB in 0s (2786 kB/s) Selecting previously unselected package libcctbx-dev. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 29350 files and directories currently installed.) Preparing to unpack .../libcctbx-dev_2026.2+ds2+~3.27.0+ds1-1_amd64.deb ... Unpacking libcctbx-dev (2026.2+ds2+~3.27.0+ds1-1) ... Setting up libcctbx-dev (2026.2+ds2+~3.27.0+ds1-1) ... 0m33.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-y', 'install', 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1'] 0m33.6s INFO: Running scripts post_install 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_install_exceptions'] 0m33.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_install_exceptions'] 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'systemd-tmpfiles', '--cat-config'] 0m33.6s DUMP: chroot: failed to run command 'systemd-tmpfiles': No such file or directory 0m33.6s DEBUG: Command failed (status=127), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'systemd-tmpfiles', '--cat-config'] 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'remove', 'libcctbx-dev'] 0m34.4s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages were automatically installed and are no longer required: gcc-15-base icu-devtools libann-cctbx-dev libann-cctbx0 libasan8 libatomic1 libboost-container1.90-dev libboost-container1.90.0 libboost-exception1.90-dev libboost-graph1.90-dev libboost-graph1.90.0 libboost-python-dev libboost-python1.90-dev libboost-python1.90.0 libboost-regex1.90-dev libboost-regex1.90.0 libboost-serialization1.90-dev libboost-serialization1.90.0 libboost-test1.90-dev libboost-test1.90.0 libboost1.90-dev libbrotli1 libc-dev-bin libc6-dev libcbf1t64 libccp4-data libccp4-dev libccp4c0t64 libccp4f0t64 libcctbx0 libcom-err2 libcurl4t64 libexpat1 libexpat1-dev libffi8 libgcc-15-dev libgfortran5 libgnutls30t64 libgomp1 libgssapi-krb5-2 libhdf5-310 libhwasan0 libicu-dev libicu78 libitm1 libjs-sphinxdoc libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap2 liblsan0 libmmdb2-0 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libp11-kit0 libpsl5t64 libpython3-dev libpython3-stdlib libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libquadmath0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libstdc++-15-dev libsz2 libtasn1-6 libtsan2 libubsan1 linux-libc-dev media-types netbase python3 python3-dev python3-minimal python3.13 python3.13-dev python3.13-minimal readline-common rpcsvc-proto zlib1g-dev Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libcctbx-dev 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. After this operation, 8848 kB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 30354 files and directories currently installed.) Removing libcctbx-dev (2026.2+ds2+~3.27.0+ds1-1) ... 0m34.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'remove', 'libcctbx-dev'] 0m34.4s INFO: Reinstalling after remove 0m34.4s INFO: Running scripts pre_install 0m34.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_database-server'] 0m34.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_database-server'] 0m34.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_exceptions'] 0m34.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_exceptions'] 0m34.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_extras'] 0m34.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_extras'] 0m34.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture'] 0m34.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture'] 0m34.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m34.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m34.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy'] 0m34.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m34.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy'] 0m34.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy', 'libcctbx-dev'] 0m34.6s DUMP: libcctbx-dev: Installed: (none) Candidate: 2026.2+ds2+~3.27.0+ds1-1 Version table: 2026.2+ds2+~3.27.0+ds1-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy', 'libcctbx-dev'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-y', 'install', 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1'] 0m35.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following NEW packages will be installed: libcctbx-dev 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/1165 kB of archives. After this operation, 8848 kB of additional disk space will be used. Selecting previously unselected package libcctbx-dev. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 29350 files and directories currently installed.) Preparing to unpack .../libcctbx-dev_2026.2+ds2+~3.27.0+ds1-1_amd64.deb ... Unpacking libcctbx-dev (2026.2+ds2+~3.27.0+ds1-1) ... Setting up libcctbx-dev (2026.2+ds2+~3.27.0+ds1-1) ... 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-y', 'install', 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1'] 0m35.5s INFO: Running scripts post_install 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_install_exceptions'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_install_exceptions'] 0m35.5s INFO: Running scripts pre_install 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_database-server'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_database-server'] 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_exceptions'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_exceptions'] 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_extras'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_extras'] 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture'] 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m35.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m35.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy'] 0m35.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m35.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy'] 0m35.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy', 'libcctbx-dev'] 0m35.7s DUMP: libcctbx-dev: Installed: 2026.2+ds2+~3.27.0+ds1-1 Candidate: 2026.2+ds2+~3.27.0+ds1-1 Version table: *** 2026.2+ds2+~3.27.0+ds1-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m35.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-cache', 'policy', 'libcctbx-dev'] 0m35.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-y', 'install', '--reinstall', 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1'] 0m36.6s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... 0 upgraded, 0 newly installed, 1 reinstalled, 0 to remove and 0 not upgraded. Need to get 0 B/1165 kB of archives. After this operation, 0 B of additional disk space will be used. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 30354 files and directories currently installed.) Preparing to unpack .../libcctbx-dev_2026.2+ds2+~3.27.0+ds1-1_amd64.deb ... Unpacking libcctbx-dev (2026.2+ds2+~3.27.0+ds1-1) over (2026.2+ds2+~3.27.0+ds1-1) ... Setting up libcctbx-dev (2026.2+ds2+~3.27.0+ds1-1) ... 0m36.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', '-y', 'install', '--reinstall', 'libcctbx-dev=2026.2+ds2+~3.27.0+ds1-1'] 0m36.6s INFO: Running scripts post_install 0m36.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_install_exceptions'] 0m36.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_install_exceptions'] 0m36.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m38.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m40.5s DEBUG: No broken symlinks as far as we can find. 0m41.8s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', '-ac', '--ignore-obsolete'] 0m45.3s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', '-ac', '--ignore-obsolete'] 0m45.3s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m45.3s DUMP: 0.15.9~deb12u1 0m45.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m45.3s INFO: Running adequate version 0.15.9~deb12u1 now. 0m45.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'libcctbx-dev'] 0m45.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'libcctbx-dev'] 0m45.4s INFO: Running scripts pre_remove 0m45.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m45.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m45.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m45.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m45.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m50.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m50.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_exceptions'] 0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_exceptions'] 0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_preseed_cleanup'] 0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/pre_remove_preseed_cleanup'] 0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m50.5s DUMP: install ok installed apt apt 3.1.16 install ok installed base-files base-files 14 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-2 install ok installed bsdutils bsdutils 1:2.41.3-4 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed dbconfig-common dbconfig-common 2.0.25 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.23.2 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.7 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-15-base:amd64 gcc-15-base 15.2.0-15 install ok installed gcc-16-base:amd64 gcc-16-base 16-20260315-1 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.13-1 install ok installed hostname hostname 3.25 install ok installed icu-devtools icu-devtools 78.2-2 install ok installed init-system-helpers init-system-helpers 1.69 install ok installed libacl1:amd64 libacl1 2.3.2-3 install ok installed libann-cctbx-dev libann-cctbx-dev 1.1.2+doc-9+b1 install ok installed libann-cctbx0 libann-cctbx0 1.1.2+doc-9+b1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.1.16 install ok installed libasan8:amd64 libasan8 16-20260315-1 install ok installed libatomic1:amd64 libatomic1 16-20260315-1 install ok installed libattr1:amd64 libattr1 1:2.5.2-4 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b1 install ok installed libblkid1:amd64 libblkid1 2.41.3-4 install ok installed libboost-container1.90-dev:amd64 libboost-container1.90-dev 1.90.0-5+b1 install ok installed libboost-container1.90.0:amd64 libboost-container1.90.0 1.90.0-5+b1 install ok installed libboost-exception1.90-dev:amd64 libboost-exception1.90-dev 1.90.0-5+b1 install ok installed libboost-graph1.90-dev:amd64 libboost-graph1.90-dev 1.90.0-5+b1 install ok installed libboost-graph1.90.0:amd64 libboost-graph1.90.0 1.90.0-5+b1 install ok installed libboost-python-dev libboost-python-dev 1.90.0.1 install ok installed libboost-python1.90-dev libboost-python1.90-dev 1.90.0-5+b1 install ok installed libboost-python1.90.0 libboost-python1.90.0 1.90.0-5+b1 install ok installed libboost-regex1.90-dev:amd64 libboost-regex1.90-dev 1.90.0-5+b1 install ok installed libboost-regex1.90.0:amd64 libboost-regex1.90.0 1.90.0-5+b1 install ok installed libboost-serialization1.90-dev:amd64 libboost-serialization1.90-dev 1.90.0-5+b1 install ok installed libboost-serialization1.90.0:amd64 libboost-serialization1.90.0 1.90.0-5+b1 install ok installed libboost-test1.90-dev:amd64 libboost-test1.90-dev 1.90.0-5+b1 install ok installed libboost-test1.90.0:amd64 libboost-test1.90.0 1.90.0-5+b1 install ok installed libboost1.90-dev:amd64 libboost1.90-dev 1.90.0-5+b1 install ok installed libbrotli1:amd64 libbrotli1 1.2.0-3 install ok installed libbsd0:amd64 libbsd0 0.12.2-2+b1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b1 install ok installed libc-bin libc-bin 2.42-13 install ok installed libc-dev-bin libc-dev-bin 2.42-13 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.42-13 install ok installed libc6:amd64 libc6 2.42-13 install ok installed libc6-dev:amd64 libc6-dev 2.42-13 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.1-1 install ok installed libcbf1t64:amd64 libcbf1t64 0.9.7+dfsg1-5.1+b1 install ok installed libccp4-data libccp4-data 8.0.0-5 install ok installed libccp4-dev:amd64 libccp4-dev 8.0.0-5 install ok installed libccp4c0t64:amd64 libccp4c0t64 8.0.0-5 install ok installed libccp4f0t64:amd64 libccp4f0t64 8.0.0-5 install ok installed libcctbx-dev libcctbx-dev 2026.2+ds2+~3.27.0+ds1-1 install ok installed libcctbx0 libcctbx0 2026.2+ds2+~3.27.0+ds1-1 install ok installed libcom-err2:amd64 libcom-err2 1.47.4-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.1-1 install ok installed libcurl4t64:amd64 libcurl4t64 8.19.0-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.282+b2 install ok installed libexpat1:amd64 libexpat1 2.7.4-1 install ok installed libexpat1-dev:amd64 libexpat1-dev 2.7.4-1 install ok installed libffi8:amd64 libffi8 3.5.2-3+b1 install ok installed libgcc-15-dev:amd64 libgcc-15-dev 15.2.0-15 install ok installed libgcc-s1:amd64 libgcc-s1 16-20260315-1 install ok installed libgfortran5:amd64 libgfortran5 16-20260315-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.12-3 install ok installed libgomp1:amd64 libgomp1 16-20260315-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.22.1-2 install ok installed libhdf5-310:amd64 libhdf5-310 1.14.6+repack-2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1 install ok installed libhwasan0:amd64 libhwasan0 16-20260315-1 install ok installed libicu-dev:amd64 libicu-dev 78.2-2 install ok installed libicu78:amd64 libicu78 78.2-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.8-4+b1 install ok installed libitm1:amd64 libitm1 16-20260315-1 install ok installed libjs-sphinxdoc libjs-sphinxdoc 8.2.3-12 install ok installed libk5crypto3:amd64 libk5crypto3 1.22.1-2 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-6+b1 install ok installed libkrb5-3:amd64 libkrb5-3 1.22.1-2 install ok installed libkrb5support0:amd64 libkrb5support0 1.22.1-2 install ok installed libldap2:amd64 libldap2 2.6.10+dfsg-1+b1 install ok installed liblsan0:amd64 liblsan0 16-20260315-1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-8 install ok installed liblzma5:amd64 liblzma5 5.8.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2+b2 install ok installed libmmdb2-0:amd64 libmmdb2-0 2.0.22-1+b3 install ok installed libmount1:amd64 libmount1 2.41.3-4 install ok installed libncursesw6:amd64 libncursesw6 6.6+20251231-1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.68.0-2 install ok installed libnghttp3-9:amd64 libnghttp3-9 1.15.0-1 install ok installed libngtcp2-16:amd64 libngtcp2-16 1.21.0-1 install ok installed libngtcp2-crypto-ossl0:amd64 libngtcp2-crypto-ossl0 1.21.0-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.26.2-2 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-5+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-5+b1 install ok installed libpam-runtime libpam-runtime 1.7.0-5 install ok installed libpam0g:amd64 libpam0g 1.7.0-5+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.46-1+b1 install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-9+b1 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.2-1.1+b2 install ok installed libpython3-dev:amd64 libpython3-dev 3.13.9-3 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.13.9-3 install ok installed libpython3.13:amd64 libpython3.13 3.13.12-1 install ok installed libpython3.13-dev:amd64 libpython3.13-dev 3.13.12-1 install ok installed libpython3.13-minimal:amd64 libpython3.13-minimal 3.13.12-1 install ok installed libpython3.13-stdlib:amd64 libpython3.13-stdlib 3.13.12-1 install ok installed libquadmath0:amd64 libquadmath0 16-20260315-1 install ok installed libreadline8t64:amd64 libreadline8t64 8.3-4 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-3+b1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-10 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-10 install ok installed libseccomp2:amd64 libseccomp2 2.6.0-2+b1 install ok installed libselinux1:amd64 libselinux1 3.9-4+b1 install ok installed libsemanage-common libsemanage-common 3.9-1 install ok installed libsemanage2:amd64 libsemanage2 3.9-1+b1 install ok installed libsepol2:amd64 libsepol2 3.9-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.41.3-4 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-9+b1 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.1-1+b1 install ok installed libssl3t64:amd64 libssl3t64 3.6.1-2 install ok installed libstdc++-15-dev:amd64 libstdc++-15-dev 15.2.0-15 install ok installed libstdc++6:amd64 libstdc++6 16-20260315-1 install ok installed libsystemd0:amd64 libsystemd0 260~rc4-1 install ok installed libsz2:amd64 libsz2 1.1.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.21.0-2 install ok installed libtext-charwidth-perl:amd64 libtext-charwidth-perl 0.04-11+b5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-10 install ok installed libtinfo6:amd64 libtinfo6 6.6+20251231-1 install ok installed libtsan2:amd64 libtsan2 16-20260315-1 install ok installed libubsan1:amd64 libubsan1 16-20260315-1 install ok installed libudev1:amd64 libudev1 260~rc4-1 install ok installed libunistring5:amd64 libunistring5 1.4.2-1 install ok installed libuuid1:amd64 libuuid1 2.41.3-4 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-3+b1 install ok installed linux-libc-dev linux-libc-dev 6.19.8-1 install ok installed login login 1:4.16.0-2+really2.41.3-4 install ok installed login.defs login.defs 1:4.19.3-1 install ok installed mawk mawk 1.3.4.20260302-1 install ok installed media-types media-types 14.0.0 install ok installed mount mount 2.41.3-4 install ok installed ncurses-base ncurses-base 6.6+20251231-1 install ok installed ncurses-bin ncurses-bin 6.6+20251231-1 install ok installed netbase netbase 6.5 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.1-2 install ok installed passwd passwd 1:4.19.3-1 install ok installed perl-base perl-base 5.40.1-7 install ok installed procps procps 2:4.0.4-9+b1 install ok installed python3 python3 3.13.9-3 install ok installed python3-dev python3-dev 3.13.9-3 install ok installed python3-minimal python3-minimal 3.13.9-3 install ok installed python3.13 python3.13 3.13.12-1 install ok installed python3.13-dev python3.13-dev 3.13.12-1 install ok installed python3.13-minimal python3.13-minimal 3.13.12-1 install ok installed readline-common readline-common 8.3-4 install ok installed rpcsvc-proto rpcsvc-proto 1.4.3-1 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.26 install ok installed sqv sqv 1.3.0-5 install ok installed sysvinit-utils sysvinit-utils 3.15-6 install ok installed tar tar 1.35+dfsg-4 install ok installed tzdata tzdata 2026a-1 install ok installed ucf ucf 3.0053 install ok installed util-linux util-linux 2.41.3-4 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-3 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.3.dfsg+really1.3.1-3 0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'remove', '--allow-remove-essential', 'gcc-15-base:amd64', 'icu-devtools', 'libann-cctbx-dev', 'libann-cctbx0', 'libasan8:amd64', 'libatomic1:amd64', 'libboost-container1.90-dev:amd64', 'libboost-container1.90.0:amd64', 'libboost-exception1.90-dev:amd64', 'libboost-graph1.90-dev:amd64', 'libboost-graph1.90.0:amd64', 'libboost-python-dev', 'libboost-python1.90-dev', 'libboost-python1.90.0', 'libboost-regex1.90-dev:amd64', 'libboost-regex1.90.0:amd64', 'libboost-serialization1.90-dev:amd64', 'libboost-serialization1.90.0:amd64', 'libboost-test1.90-dev:amd64', 'libboost-test1.90.0:amd64', 'libboost1.90-dev:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcbf1t64:amd64', 'libccp4-data', 'libccp4-dev:amd64', 'libccp4c0t64:amd64', 'libccp4f0t64:amd64', 'libcctbx0', 'libcom-err2:amd64', 'libcurl4t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libffi8:amd64', 'libgcc-15-dev:amd64', 'libgfortran5:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-310:amd64', 'libhwasan0:amd64', 'libicu-dev:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libitm1:amd64', 'libjs-sphinxdoc', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap2:amd64', 'liblsan0:amd64', 'libmmdb2-0:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libp11-kit0:amd64', 'libpsl5t64:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-15-dev:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunistring5:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'python3', 'python3-dev', 'python3-minimal', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'readline-common', 'rpcsvc-proto', 'zlib1g-dev:amd64', 'libcctbx-dev'] 0m52.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: gcc-15-base icu-devtools libann-cctbx-dev libann-cctbx0 libasan8 libatomic1 libboost-container1.90-dev libboost-container1.90.0 libboost-exception1.90-dev libboost-graph1.90-dev libboost-graph1.90.0 libboost-python-dev libboost-python1.90-dev libboost-python1.90.0 libboost-regex1.90-dev libboost-regex1.90.0 libboost-serialization1.90-dev libboost-serialization1.90.0 libboost-test1.90-dev libboost-test1.90.0 libboost1.90-dev libbrotli1 libc-dev-bin libc6-dev libcbf1t64 libccp4-data libccp4-dev libccp4c0t64 libccp4f0t64 libcctbx-dev libcctbx0 libcom-err2 libcurl4t64 libexpat1 libexpat1-dev libffi8 libgcc-15-dev libgfortran5 libgnutls30t64 libgomp1 libgssapi-krb5-2 libhdf5-310 libhwasan0 libicu-dev libicu78 libidn2-0 libitm1 libjs-sphinxdoc libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap2 liblsan0 libmmdb2-0 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libp11-kit0 libpsl5t64 libpython3-dev libpython3-stdlib libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libquadmath0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libstdc++-15-dev libsz2 libtasn1-6 libtsan2 libubsan1 libunistring5 linux-libc-dev media-types netbase python3 python3-dev python3-minimal python3.13 python3.13-dev python3.13-minimal readline-common rpcsvc-proto zlib1g-dev 0 upgraded, 0 newly installed, 92 to remove and 0 not upgraded. After this operation, 510 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 30354 files and directories currently installed.) Removing libcctbx-dev (2026.2+ds2+~3.27.0+ds1-1) ... Removing libboost-python-dev (1.90.0.1) ... Removing libboost-python1.90-dev (1.90.0-5+b1) ... Removing libboost-graph1.90-dev:amd64 (1.90.0-5+b1) ... Removing libboost-test1.90-dev:amd64 (1.90.0-5+b1) ... Removing libboost-serialization1.90-dev:amd64 (1.90.0-5+b1) ... Removing libboost-regex1.90-dev:amd64 (1.90.0-5+b1) ... Removing libicu-dev:amd64 (78.2-2) ... Removing icu-devtools (78.2-2) ... Removing libann-cctbx-dev (1.1.2+doc-9+b1) ... Removing libcctbx0 (2026.2+ds2+~3.27.0+ds1-1) ... Removing libann-cctbx0 (1.1.2+doc-9+b1) ... Removing libboost-container1.90-dev:amd64 (1.90.0-5+b1) ... Removing libboost-container1.90.0:amd64 (1.90.0-5+b1) ... Removing libboost-exception1.90-dev:amd64 (1.90.0-5+b1) ... Removing libboost-graph1.90.0:amd64 (1.90.0-5+b1) ... Removing libboost-python1.90.0 (1.90.0-5+b1) ... Removing libboost-regex1.90.0:amd64 (1.90.0-5+b1) ... Removing libboost-serialization1.90.0:amd64 (1.90.0-5+b1) ... Removing libboost-test1.90.0:amd64 (1.90.0-5+b1) ... Removing libcbf1t64:amd64 (0.9.7+dfsg1-5.1+b1) ... Removing libhdf5-310:amd64 (1.14.6+repack-2) ... Removing libcurl4t64:amd64 (8.19.0-1) ... Removing libbrotli1:amd64 (1.2.0-3) ... Removing python3-dev (3.13.9-3) ... Removing python3.13-dev (3.13.12-1) ... Removing libpython3-dev:amd64 (3.13.9-3) ... Removing libpython3.13-dev:amd64 (3.13.12-1) ... Removing zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-3) ... Removing libexpat1-dev:amd64 (2.7.4-1) ... Removing libccp4-dev:amd64 (8.0.0-5) ... Removing libccp4f0t64:amd64 (8.0.0-5) ... Removing libccp4c0t64:amd64 (8.0.0-5) ... Removing libccp4-data (8.0.0-5) ... Removing libgssapi-krb5-2:amd64 (1.22.1-2) ... Removing libkrb5-3:amd64 (1.22.1-2) ... Removing libcom-err2:amd64 (1.47.4-1) ... Removing python3 (3.13.9-3) ... Removing python3.13 (3.13.12-1) ... Removing python3-minimal (3.13.9-3) ... Removing python3.13-minimal (3.13.12-1) ... Removing libpython3.13:amd64 (3.13.12-1) ... Removing libexpat1:amd64 (2.7.4-1) ... Removing libpython3-stdlib:amd64 (3.13.9-3) ... Removing libpython3.13-stdlib:amd64 (3.13.12-1) ... find: '/usr/lib/python3': No such file or directory Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-3+b1) ... Removing libgnutls30t64:amd64 (3.8.12-3) ... Removing libp11-kit0:amd64 (0.26.2-2) ... Removing libffi8:amd64 (3.5.2-3+b1) ... Removing libgfortran5:amd64 (16-20260315-1) ... Removing libicu78:amd64 (78.2-2) ... Removing libpsl5t64:amd64 (0.21.2-1.1+b2) ... Removing libidn2-0:amd64 (2.3.8-4+b1) ... Removing libjs-sphinxdoc (8.2.3-12) ... Removing libk5crypto3:amd64 (1.22.1-2) ... Removing libkeyutils1:amd64 (1.6.3-6+b1) ... Removing libkrb5support0:amd64 (1.22.1-2) ... Removing libldap2:amd64 (2.6.10+dfsg-1+b1) ... Removing libmmdb2-0:amd64 (2.0.22-1+b3) ... Removing libnghttp2-14:amd64 (1.68.0-2) ... Removing libnghttp3-9:amd64 (1.15.0-1) ... Removing libngtcp2-crypto-ossl0:amd64 (1.21.0-1) ... Removing libngtcp2-16:amd64 (1.21.0-1) ... Removing libpython3.13-minimal:amd64 (3.13.12-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.3-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsasl2-2:amd64 (2.1.28+dfsg1-10) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-10) ... Removing libsqlite3-0:amd64 (3.46.1-9+b1) ... Removing libssh2-1t64:amd64 (1.11.1-1+b1) ... Removing libsz2:amd64 (1.1.6-1) ... Removing libtasn1-6:amd64 (4.21.0-2) ... Removing libunistring5:amd64 (1.4.2-1) ... Removing media-types (14.0.0) ... Removing netbase (6.5) ... Removing readline-common (8.3-4) ... Removing libboost1.90-dev:amd64 (1.90.0-5+b1) ... Removing libstdc++-15-dev:amd64 (15.2.0-15) ... Removing libgcc-15-dev:amd64 (15.2.0-15) ... Removing gcc-15-base:amd64 (15.2.0-15) ... Removing libasan8:amd64 (16-20260315-1) ... Removing libatomic1:amd64 (16-20260315-1) ... Removing libc6-dev:amd64 (2.42-13) ... Removing libc-dev-bin (2.42-13) ... Removing libgomp1:amd64 (16-20260315-1) ... Removing libhwasan0:amd64 (16-20260315-1) ... Removing libitm1:amd64 (16-20260315-1) ... Removing liblsan0:amd64 (16-20260315-1) ... Removing libquadmath0:amd64 (16-20260315-1) ... Removing libtsan2:amd64 (16-20260315-1) ... Removing libubsan1:amd64 (16-20260315-1) ... Removing linux-libc-dev (6.19.8-1) ... Removing rpcsvc-proto (1.4.3-1) ... Processing triggers for libc-bin (2.42-13) ... 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'remove', '--allow-remove-essential', 'gcc-15-base:amd64', 'icu-devtools', 'libann-cctbx-dev', 'libann-cctbx0', 'libasan8:amd64', 'libatomic1:amd64', 'libboost-container1.90-dev:amd64', 'libboost-container1.90.0:amd64', 'libboost-exception1.90-dev:amd64', 'libboost-graph1.90-dev:amd64', 'libboost-graph1.90.0:amd64', 'libboost-python-dev', 'libboost-python1.90-dev', 'libboost-python1.90.0', 'libboost-regex1.90-dev:amd64', 'libboost-regex1.90.0:amd64', 'libboost-serialization1.90-dev:amd64', 'libboost-serialization1.90.0:amd64', 'libboost-test1.90-dev:amd64', 'libboost-test1.90.0:amd64', 'libboost1.90-dev:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcbf1t64:amd64', 'libccp4-data', 'libccp4-dev:amd64', 'libccp4c0t64:amd64', 'libccp4f0t64:amd64', 'libcctbx0', 'libcom-err2:amd64', 'libcurl4t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libffi8:amd64', 'libgcc-15-dev:amd64', 'libgfortran5:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-310:amd64', 'libhwasan0:amd64', 'libicu-dev:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libitm1:amd64', 'libjs-sphinxdoc', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap2:amd64', 'liblsan0:amd64', 'libmmdb2-0:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libp11-kit0:amd64', 'libpsl5t64:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-15-dev:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunistring5:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'python3', 'python3-dev', 'python3-minimal', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'readline-common', 'rpcsvc-proto', 'zlib1g-dev:amd64', 'libcctbx-dev'] 0m52.8s INFO: Running scripts post_remove 0m52.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_remove_cleanup'] 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_remove_cleanup'] 0m52.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_remove_exceptions'] 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_remove_exceptions'] 0m52.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--purge', 'gcc-15-base:amd64', 'icu-devtools', 'libann-cctbx-dev', 'libann-cctbx0', 'libasan8:amd64', 'libatomic1:amd64', 'libboost-container1.90-dev:amd64', 'libboost-container1.90.0:amd64', 'libboost-exception1.90-dev:amd64', 'libboost-graph1.90-dev:amd64', 'libboost-graph1.90.0:amd64', 'libboost-python-dev', 'libboost-python1.90-dev', 'libboost-python1.90.0', 'libboost-regex1.90-dev:amd64', 'libboost-regex1.90.0:amd64', 'libboost-serialization1.90-dev:amd64', 'libboost-serialization1.90.0:amd64', 'libboost-test1.90-dev:amd64', 'libboost-test1.90.0:amd64', 'libboost1.90-dev:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcbf1t64:amd64', 'libccp4-data', 'libccp4-dev:amd64', 'libccp4c0t64:amd64', 'libccp4f0t64:amd64', 'libcctbx0', 'libcom-err2:amd64', 'libcurl4t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libffi8:amd64', 'libgcc-15-dev:amd64', 'libgfortran5:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-310:amd64', 'libhwasan0:amd64', 'libicu-dev:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libitm1:amd64', 'libjs-sphinxdoc', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap2:amd64', 'liblsan0:amd64', 'libmmdb2-0:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libp11-kit0:amd64', 'libpsl5t64:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-15-dev:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunistring5:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'python3', 'python3-dev', 'python3-minimal', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'readline-common', 'rpcsvc-proto', 'zlib1g-dev:amd64'] 0m52.8s DUMP: dpkg: warning: ignoring request to remove gcc-15-base which is not installed dpkg: warning: ignoring request to remove icu-devtools which is not installed dpkg: warning: ignoring request to remove libann-cctbx-dev which is not installed dpkg: warning: ignoring request to remove libann-cctbx0 which is not installed dpkg: warning: ignoring request to remove libasan8 which is not installed dpkg: warning: ignoring request to remove libatomic1 which is not installed dpkg: warning: ignoring request to remove libboost-container1.90-dev which is not installed dpkg: warning: ignoring request to remove libboost-container1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-exception1.90-dev which is not installed dpkg: warning: ignoring request to remove libboost-graph1.90-dev which is not installed dpkg: warning: ignoring request to remove libboost-graph1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-python-dev which is not installed dpkg: warning: ignoring request to remove libboost-python1.90-dev which is not installed dpkg: warning: ignoring request to remove libboost-python1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-regex1.90-dev which is not installed dpkg: warning: ignoring request to remove libboost-regex1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-serialization1.90-dev which is not installed dpkg: warning: ignoring request to remove libboost-serialization1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-test1.90-dev which is not installed dpkg: warning: ignoring request to remove libboost-test1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost1.90-dev which is not installed dpkg: warning: ignoring request to remove libbrotli1 which is not installed dpkg: warning: ignoring request to remove libc-dev-bin which is not installed dpkg: warning: ignoring request to remove libc6-dev which is not installed dpkg: warning: ignoring request to remove libcbf1t64 which is not installed dpkg: warning: ignoring request to remove libccp4-data which is not installed dpkg: warning: ignoring request to remove libccp4-dev which is not installed dpkg: warning: ignoring request to remove libccp4c0t64 which is not installed dpkg: warning: ignoring request to remove libccp4f0t64 which is not installed dpkg: warning: ignoring request to remove libcctbx0 which is not installed dpkg: warning: ignoring request to remove libcom-err2 which is not installed dpkg: warning: ignoring request to remove libcurl4t64 which is not installed dpkg: warning: ignoring request to remove libexpat1 which is not installed dpkg: warning: ignoring request to remove libexpat1-dev which is not installed dpkg: warning: ignoring request to remove libffi8 which is not installed dpkg: warning: ignoring request to remove libgcc-15-dev which is not installed dpkg: warning: ignoring request to remove libgfortran5 which is not installed dpkg: warning: ignoring request to remove libgnutls30t64 which is not installed dpkg: warning: ignoring request to remove libgomp1 which is not installed (Reading database ... 5448 files and directories currently installed.) Purging configuration files for libgssapi-krb5-2:amd64 (1.22.1-2) ... dpkg: warning: ignoring request to remove libhdf5-310 which is not installed dpkg: warning: ignoring request to remove libhwasan0 which is not installed dpkg: warning: ignoring request to remove libicu-dev which is not installed dpkg: warning: ignoring request to remove libicu78 which is not installed dpkg: warning: ignoring request to remove libidn2-0 which is not installed dpkg: warning: ignoring request to remove libitm1 which is not installed dpkg: warning: ignoring request to remove libjs-sphinxdoc which is not installed dpkg: warning: ignoring request to remove libk5crypto3 which is not installed dpkg: warning: ignoring request to remove libkeyutils1 which is not installed dpkg: warning: ignoring request to remove libkrb5-3 which is not installed dpkg: warning: ignoring request to remove libkrb5support0 which is not installed dpkg: warning: ignoring request to remove libldap2 which is not installed dpkg: warning: ignoring request to remove liblsan0 which is not installed dpkg: warning: ignoring request to remove libmmdb2-0 which is not installed dpkg: warning: ignoring request to remove libnghttp2-14 which is not installed dpkg: warning: ignoring request to remove libnghttp3-9 which is not installed dpkg: warning: ignoring request to remove libngtcp2-16 which is not installed dpkg: warning: ignoring request to remove libngtcp2-crypto-ossl0 which is not installed dpkg: warning: ignoring request to remove libp11-kit0 which is not installed dpkg: warning: ignoring request to remove libpsl5t64 which is not installed dpkg: warning: ignoring request to remove libpython3-dev which is not installed dpkg: warning: ignoring request to remove libpython3-stdlib which is not installed dpkg: warning: ignoring request to remove libpython3.13 which is not installed dpkg: warning: ignoring request to remove libpython3.13-dev which is not installed Purging configuration files for libpython3.13-minimal:amd64 (3.13.12-1) ... dpkg: warning: ignoring request to remove libpython3.13-stdlib which is not installed dpkg: warning: ignoring request to remove libquadmath0 which is not installed Purging configuration files for libreadline8t64:amd64 (8.3-4) ... dpkg: warning: ignoring request to remove librtmp1 which is not installed dpkg: warning: ignoring request to remove libsasl2-2 which is not installed dpkg: warning: ignoring request to remove libsasl2-modules-db which is not installed dpkg: warning: ignoring request to remove libsqlite3-0 which is not installed dpkg: warning: ignoring request to remove libssh2-1t64 which is not installed dpkg: warning: ignoring request to remove libstdc++-15-dev which is not installed dpkg: warning: ignoring request to remove libsz2 which is not installed dpkg: warning: ignoring request to remove libtasn1-6 which is not installed dpkg: warning: ignoring request to remove libtsan2 which is not installed dpkg: warning: ignoring request to remove libubsan1 which is not installed dpkg: warning: ignoring request to remove libunistring5 which is not installed dpkg: warning: ignoring request to remove linux-libc-dev which is not installed Purging configuration files for media-types (14.0.0) ... Purging configuration files for netbase (6.5) ... Purging configuration files for python3 (3.13.9-3) ... dpkg: warning: ignoring request to remove python3-dev which is not installed dpkg: warning: ignoring request to remove python3-minimal which is not installed dpkg: warning: ignoring request to remove python3.13 which is not installed dpkg: warning: ignoring request to remove python3.13-dev which is not installed Purging configuration files for python3.13-minimal (3.13.12-1) ... Purging configuration files for readline-common (8.3-4) ... dpkg: warning: ignoring request to remove rpcsvc-proto which is not installed dpkg: warning: ignoring request to remove zlib1g-dev which is not installed 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--purge', 'gcc-15-base:amd64', 'icu-devtools', 'libann-cctbx-dev', 'libann-cctbx0', 'libasan8:amd64', 'libatomic1:amd64', 'libboost-container1.90-dev:amd64', 'libboost-container1.90.0:amd64', 'libboost-exception1.90-dev:amd64', 'libboost-graph1.90-dev:amd64', 'libboost-graph1.90.0:amd64', 'libboost-python-dev', 'libboost-python1.90-dev', 'libboost-python1.90.0', 'libboost-regex1.90-dev:amd64', 'libboost-regex1.90.0:amd64', 'libboost-serialization1.90-dev:amd64', 'libboost-serialization1.90.0:amd64', 'libboost-test1.90-dev:amd64', 'libboost-test1.90.0:amd64', 'libboost1.90-dev:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcbf1t64:amd64', 'libccp4-data', 'libccp4-dev:amd64', 'libccp4c0t64:amd64', 'libccp4f0t64:amd64', 'libcctbx0', 'libcom-err2:amd64', 'libcurl4t64:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libffi8:amd64', 'libgcc-15-dev:amd64', 'libgfortran5:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-310:amd64', 'libhwasan0:amd64', 'libicu-dev:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libitm1:amd64', 'libjs-sphinxdoc', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap2:amd64', 'liblsan0:amd64', 'libmmdb2-0:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libp11-kit0:amd64', 'libpsl5t64:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-15-dev:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunistring5:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'python3', 'python3-dev', 'python3-minimal', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'readline-common', 'rpcsvc-proto', 'zlib1g-dev:amd64'] 0m52.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--purge', 'libcctbx-dev'] 0m52.8s DUMP: dpkg: warning: ignoring request to remove libcctbx-dev which is not installed 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--purge', 'libcctbx-dev'] 0m52.8s INFO: Running scripts post_purge 0m52.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_purge_exceptions'] 0m52.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_purge_exceptions'] 0m52.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_purge_manual_cleanup'] 0m52.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_purge_manual_cleanup'] 0m52.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--purge', '--pending'] 0m52.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--purge', '--pending'] 0m52.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--remove', '--pending'] 0m52.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg', '--remove', '--pending'] 0m52.9s INFO: Running scripts post_test 0m52.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_test_exceptions'] 0m52.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'tmp/scripts/post_test_exceptions'] 0m52.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m53.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m53.7s DEBUG: No broken symlinks as far as we can find. 0m53.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-divert', '--list'] 0m53.7s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m53.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'dpkg-divert', '--list'] 0m53.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'clean'] 0m53.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r', 'apt-get', 'clean'] 0m53.7s DEBUG: Recording chroot state 0m55.1s INFO: PASS: Installation and purging test. 0m55.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/shm'] 0m55.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/shm'] 0m55.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/console'] 0m55.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/console'] 0m55.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/ptmx'] 0m55.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/ptmx'] 0m55.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/pts'] 0m55.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/dev/pts'] 0m55.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/proc'] 0m55.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r/proc'] 0m55.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m55.8s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6t0hsf3r'] 0m55.8s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp6t0hsf3r 0m55.8s INFO: PASS: All tests. 0m55.8s INFO: piuparts run ends. ret=0 End: 2026-03-17 05:20:39 GMT