Start: 2024-11-01 22:34:00 GMT Package: libgenomicsdb-dev Source: genomicsdb Version: 1.5.4-1 Installed-Size: 26440 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libgenomicsdb1 (= 1.5.4-1) Description: sparse array storage library for genomics (development files) Homepage: https://www.genomicsdb.org/ Description-md5: 04821e6557f75dcb327f65199e4b3db3 Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/g/genomicsdb/libgenomicsdb-dev_1.5.4-1_amd64.deb Size: 2242652 MD5sum: 12967c9d89a9ae66ba3b886e460ba023 SHA256: 8fc3e67da229ec10b59f2aecca50deb4e424671c6052e5b95c1cb6e5e4e52417 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt libgenomicsdb-dev=1.5.4-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt libgenomicsdb-dev=1.5.4-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp6mhk1zw6 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp6mhk1zw6 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/proc'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/proc'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/6', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/6', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp6mhk1zw6/tmp/scripts/ 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts-leftovers to /srv/piuparts.debian.org/tmp/tmp6mhk1zw6/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'update'] 0m4.9s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [202 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.0 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7332 kB] Fetched 17.6 MB in 3s (5401 kB/s) Reading package lists... 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'update'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-yf', 'dist-upgrade'] 0m6.3s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: gpgv libsystemd0 libudev1 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 746 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 gpgv amd64 2.2.45-2 [219 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 256.7-3 [382 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 256.7-3 [145 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 746 kB in 0s (15.4 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5154 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.45-2_amd64.deb ... Unpacking gpgv (2.2.45-2) over (2.2.45-1) ... Setting up gpgv (2.2.45-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5154 files and directories currently installed.) Preparing to unpack .../libsystemd0_256.7-3_amd64.deb ... Unpacking libsystemd0:amd64 (256.7-3) over (256.7-2) ... Setting up libsystemd0:amd64 (256.7-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5154 files and directories currently installed.) Preparing to unpack .../libudev1_256.7-3_amd64.deb ... Unpacking libudev1:amd64 (256.7-3) over (256.7-2) ... Setting up libudev1:amd64 (256.7-3) ... Processing triggers for libc-bin (2.40-3) ... 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-yf', 'dist-upgrade'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.8s DUMP: 398d8895c08c7a174457ba2a158f528e - 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.8s INFO: Running scripts post_setup 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_dummy_users'] 0m7.7s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_dummy_users'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_fake-essential'] 0m9.3s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Reading state information... init-system-helpers is already the newest version (1.67). The following additional packages will be installed: sensible-utils ucf Suggested packages: dbconfig-mysql | dbconfig-pgsql | dbconfig-sqlite3 | dbconfig-no-thanks The following NEW packages will be installed: dbconfig-common sensible-utils ucf 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 672 kB of archives. After this operation, 1826 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:2 http://deb.debian.org/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:3 http://deb.debian.org/debian sid/main amd64 dbconfig-common all 2.0.24 [592 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 672 kB in 0s (14.7 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5154 files and directories currently installed.) Preparing to unpack .../sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package ucf. Preparing to unpack .../ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package dbconfig-common. Preparing to unpack .../dbconfig-common_2.0.24_all.deb ... Unpacking dbconfig-common (2.0.24) ... Setting up sensible-utils (0.0.24) ... Setting up ucf (3.0043+nmu1) ... Setting up dbconfig-common (2.0.24) ... Creating config file /etc/dbconfig-common/config with new version 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_fake-essential'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_forbid_home'] 0m9.3s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_forbid_home'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.4s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_minimize'] 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_minimize'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_zz_backports'] 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_setup_zz_backports'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'clean'] 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'clean'] 0m9.4s DEBUG: Recording chroot state 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m10.1s DUMP: install ok installed apt apt 2.9.10 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.32-1+b2 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-9 install ok installed dbconfig-common dbconfig-common 2.0.24 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1+b1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-7 install ok installed gpgv gpgv 2.2.45-2 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.10 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.1-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.1-2 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-3 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272+b1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-7 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b2 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2+b1 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2+b1 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b2 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b2 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libss2:amd64 libss2 1.47.1-1+b1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-7 install ok installed libsystemd0:amd64 libsystemd0 256.7-3 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libudev1:amd64 libudev1 256.7-3 install ok installed libunistring5:amd64 libunistring5 1.2-1+b1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1+b1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.40.0-6 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.24 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-3 install ok installed ucf ucf 3.0043+nmu1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-divert', '--list'] 0m10.1s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-divert', '--list'] 0m10.1s INFO: Running scripts is_testable 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/is_testable_uninstallable'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/is_testable_uninstallable'] 0m10.1s INFO: apt-cache does not know about any of the requested packages 0m10.1s INFO: Running scripts pre_test 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_test_exceptions'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_test_exceptions'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_test_root_password'] 0m10.1s DUMP: New password: Retype new password: passwd: password updated successfully 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_test_root_password'] 0m10.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m10.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m11.3s DEBUG: No broken symlinks as far as we can find. 0m11.3s INFO: Running scripts pre_install 0m11.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_database-server'] 0m11.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_database-server'] 0m11.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_exceptions'] 0m11.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_exceptions'] 0m11.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_extras'] 0m11.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_extras'] 0m11.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture'] 0m11.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture'] 0m11.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m11.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m11.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'show', '--no-all-versions', 'libgenomicsdb-dev=1.5.4-1'] 0m12.4s DUMP: Package: libgenomicsdb-dev Source: genomicsdb Version: 1.5.4-1 Installed-Size: 26440 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libgenomicsdb1 (= 1.5.4-1) Description-en: sparse array storage library for genomics (development files) GenomicsDB is built on top of a htslib fork and an internal array storage system for importing, querying and transforming variant data. Variant data is sparse by nature (sparse relative to the whole genome) and using sparse array data stores is a perfect fit for storing such data. . The GenomicsDB stores variant data in a 2D array where: - Each column corresponds to a genomic position (chromosome + position); - Each row corresponds to a sample in a VCF (or CallSet in the GA4GH terminology); - Each cell contains data for a given sample/CallSet at a given position; data is stored in the form of cell attributes; - Cells are stored in column major order - this makes accessing cells with the same column index (i.e. data for a given genomic position over all samples) fast. - Variant interval/gVCF interval data is stored in a cell at the start of the interval. The END is stored as a cell attribute. For variant intervals (such as deletions and gVCF REF blocks), an additional cell is stored at the END value of the variant interval. When queried for a given genomic position, the query library performs an efficient sweep to determine all intervals that intersect with the queried position. . This package contains the development files and the static library. Description-md5: 04821e6557f75dcb327f65199e4b3db3 Homepage: https://www.genomicsdb.org/ Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/g/genomicsdb/libgenomicsdb-dev_1.5.4-1_amd64.deb Size: 2242652 MD5sum: 12967c9d89a9ae66ba3b886e460ba023 SHA256: 8fc3e67da229ec10b59f2aecca50deb4e424671c6052e5b95c1cb6e5e4e52417 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'show', '--no-all-versions', 'libgenomicsdb-dev=1.5.4-1'] 0m12.4s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: piuparts developers team Depends: libgenomicsdb1 (= 1.5.4-1) Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed 0m12.4s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpk7risltw/piuparts-depends-dummy'] 0m12.5s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmpk7risltw/piuparts-depends-dummy.deb'. 0m12.5s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpk7risltw/piuparts-depends-dummy'] 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m12.5s DUMP: 2.9.10 0m12.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m12.5s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmpk7risltw/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmp6mhk1zw6/tmp 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 0m20.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: adduser ibverbs-providers libamd-comgr2 libamdhip64-5 libatomic1 libbrotli1 libcbor0.10 libcurl4t64 libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libevent-core-2.1-7t64 libevent-pthreads-2.1-7t64 libfabric1 libfido2-1 libfmt9 libgenomicsdb1 libgomp1 libgssapi-krb5-2 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs1 libicu72 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libllvm17t64 libmunge2 libmuparserx4.0.12 libnghttp2-14 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi3t64 libpciaccess0 libpmix2t64 libprotobuf32t64 libpsl5t64 libpsm-infinipath1 libpsm2-2 librdmacm1t64 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1t64 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 libz3-4 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client Suggested packages: liblocale-gettext-perl perl cron quota krb5-doc krb5-user libhwloc-contrib-plugins pciutils opencl-icd gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass Recommended packages: ca-certificates krb5-locales libldap-common publicsuffix libsasl2-modules xauth The following NEW packages will be installed: adduser ibverbs-providers libamd-comgr2 libamdhip64-5 libatomic1 libbrotli1 libcbor0.10 libcurl4t64 libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libevent-core-2.1-7t64 libevent-pthreads-2.1-7t64 libfabric1 libfido2-1 libfmt9 libgenomicsdb1 libgomp1 libgssapi-krb5-2 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs1 libicu72 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libllvm17t64 libmunge2 libmuparserx4.0.12 libnghttp2-14 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi3t64 libpciaccess0 libpmix2t64 libprotobuf32t64 libpsl5t64 libpsm-infinipath1 libpsm2-2 librdmacm1t64 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1t64 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 libz3-4 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client piuparts-depends-dummy 0 upgraded, 69 newly installed, 0 to remove and 0 not upgraded. Need to get 78.4 MB/78.4 MB of archives. After this operation, 332 MB of additional disk space will be used. Get:1 /tmp/piuparts-depends-dummy.deb piuparts-depends-dummy amd64 0.invalid.0 [648 B] Get:2 http://deb.debian.org/debian sid/main amd64 adduser all 3.137 [140 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:9 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:11 http://deb.debian.org/debian sid/main amd64 openssh-client amd64 1:9.9p1-3 [991 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libibverbs1 amd64 52.0-2+b1 [62.2 kB] Get:15 http://deb.debian.org/debian sid/main amd64 ibverbs-providers amd64 52.0-2+b1 [343 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libz3-4 amd64 4.8.12-3.1+b3 [7772 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB] Get:20 http://deb.debian.org/debian sid/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get:21 http://deb.debian.org/debian sid/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get:22 http://deb.debian.org/debian sid/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 14.2.0-7 [9284 B] Get:30 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b5 [307 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:36 http://deb.debian.org/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libcurl4t64 amd64 8.10.1-2 [352 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get:43 http://deb.debian.org/debian sid/main amd64 librdmacm1t64 amd64 52.0-2+b1 [70.4 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libfmt9 amd64 9.1.0+ds1-2 [113 kB] Get:46 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 14.2.0-7 [137 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libmuparserx4.0.12 amd64 4.0.12-2 [198 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libprotobuf32t64 amd64 3.21.12-10 [982 kB] Get:49 http://deb.debian.org/debian sid/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB] Get:51 http://deb.debian.org/debian sid/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get:52 http://deb.debian.org/debian sid/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3+b2 [24.4 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libx11-data all 2:1.8.10-1 [337 kB] Get:56 http://deb.debian.org/debian sid/main amd64 libx11-6 amd64 2:1.8.10-1 [813 kB] Get:57 http://deb.debian.org/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB] Get:59 http://deb.debian.org/debian sid/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get:60 http://deb.debian.org/debian sid/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libpmix2t64 amd64 5.0.3-2+b1 [662 kB] Get:62 http://deb.debian.org/debian sid/main amd64 libibumad3 amd64 52.0-2+b1 [28.2 kB] Get:63 http://deb.debian.org/debian sid/main amd64 libibmad5 amd64 52.0-2+b1 [43.4 kB] Get:64 http://deb.debian.org/debian sid/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get:65 http://deb.debian.org/debian sid/main amd64 libopenmpi3t64 amd64 5.0.5-3 [2007 kB] Get:66 http://deb.debian.org/debian sid/main amd64 openmpi-common all 5.0.5-3 [95.0 kB] Get:67 http://deb.debian.org/debian sid/main amd64 openmpi-bin amd64 5.0.5-3 [168 kB] Get:68 http://deb.debian.org/debian sid/main amd64 mpi-default-bin amd64 1.17 [2372 B] Get:69 http://deb.debian.org/debian sid/main amd64 libgenomicsdb1 amd64 1.5.4-1 [1663 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 78.4 MB in 1s (145 MB/s) Selecting previously unselected package adduser. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5506 files and directories currently installed.) Preparing to unpack .../archives/adduser_3.137_all.deb ... Unpacking adduser (3.137) ... Setting up adduser (3.137) ... Selecting previously unselected package libedit2:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5577 files and directories currently installed.) Preparing to unpack .../00-libedit2_3.1-20240808-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20240808-1) ... Selecting previously unselected package libcbor0.10:amd64. Preparing to unpack .../01-libcbor0.10_0.10.2-2_amd64.deb ... Unpacking libcbor0.10:amd64 (0.10.2-2) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../02-libfido2-1_1.15.0-1+b1_amd64.deb ... Unpacking libfido2-1:amd64 (1.15.0-1+b1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../03-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../04-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../05-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../06-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../07-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package openssh-client. Preparing to unpack .../08-openssh-client_1%3a9.9p1-3_amd64.deb ... Unpacking openssh-client (1:9.9p1-3) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../09-libnl-3-200_3.7.0-0.3+b1_amd64.deb ... Unpacking libnl-3-200:amd64 (3.7.0-0.3+b1) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../10-libnl-route-3-200_3.7.0-0.3+b1_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.7.0-0.3+b1) ... Selecting previously unselected package libibverbs1:amd64. Preparing to unpack .../11-libibverbs1_52.0-2+b1_amd64.deb ... Unpacking libibverbs1:amd64 (52.0-2+b1) ... Selecting previously unselected package ibverbs-providers:amd64. Preparing to unpack .../12-ibverbs-providers_52.0-2+b1_amd64.deb ... Unpacking ibverbs-providers:amd64 (52.0-2+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../13-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... 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Preparing to unpack .../41-libfabric1_1.17.0-3.1_amd64.deb ... Unpacking libfabric1:amd64 (1.17.0-3.1) ... Selecting previously unselected package libfmt9:amd64. Preparing to unpack .../42-libfmt9_9.1.0+ds1-2_amd64.deb ... Unpacking libfmt9:amd64 (9.1.0+ds1-2) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../43-libgomp1_14.2.0-7_amd64.deb ... Unpacking libgomp1:amd64 (14.2.0-7) ... Selecting previously unselected package libmuparserx4.0.12:amd64. Preparing to unpack .../44-libmuparserx4.0.12_4.0.12-2_amd64.deb ... Unpacking libmuparserx4.0.12:amd64 (4.0.12-2) ... Selecting previously unselected package libprotobuf32t64:amd64. Preparing to unpack .../45-libprotobuf32t64_3.21.12-10_amd64.deb ... Unpacking libprotobuf32t64:amd64 (3.21.12-10) ... Selecting previously unselected package libhwloc15:amd64. Preparing to unpack .../46-libhwloc15_2.11.2-1_amd64.deb ... Unpacking libhwloc15:amd64 (2.11.2-1) ... Selecting previously unselected package libmunge2:amd64. Preparing to unpack .../47-libmunge2_0.5.15-4+b1_amd64.deb ... Unpacking libmunge2:amd64 (0.5.15-4+b1) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../48-libpciaccess0_0.17-3+b2_amd64.deb ... Unpacking libpciaccess0:amd64 (0.17-3+b2) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../49-libxau6_1%3a1.0.11-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../50-libxdmcp6_1%3a1.1.2-3+b2_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3+b2) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../51-libxcb1_1.17.0-2+b1_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../52-libx11-data_2%3a1.8.10-1_all.deb ... Unpacking libx11-data (2:1.8.10-1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../53-libx11-6_2%3a1.8.10-1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.10-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../54-libxext6_2%3a1.3.4-1+b2_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b2) ... Selecting previously unselected package libxnvctrl0:amd64. Preparing to unpack .../55-libxnvctrl0_535.171.04-1+b1_amd64.deb ... Unpacking libxnvctrl0:amd64 (535.171.04-1+b1) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../56-ocl-icd-libopencl1_2.3.2-1+b2_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1+b2) ... Selecting previously unselected package libhwloc-plugins:amd64. Preparing to unpack .../57-libhwloc-plugins_2.11.2-1_amd64.deb ... Unpacking libhwloc-plugins:amd64 (2.11.2-1) ... Selecting previously unselected package libpmix2t64:amd64. Preparing to unpack .../58-libpmix2t64_5.0.3-2+b1_amd64.deb ... Unpacking libpmix2t64:amd64 (5.0.3-2+b1) ... Selecting previously unselected package libibumad3:amd64. Preparing to unpack .../59-libibumad3_52.0-2+b1_amd64.deb ... Unpacking libibumad3:amd64 (52.0-2+b1) ... Selecting previously unselected package libibmad5:amd64. Preparing to unpack .../60-libibmad5_52.0-2+b1_amd64.deb ... Unpacking libibmad5:amd64 (52.0-2+b1) ... Selecting previously unselected package libucx0:amd64. Preparing to unpack .../61-libucx0_1.17.0+ds-3_amd64.deb ... Unpacking libucx0:amd64 (1.17.0+ds-3) ... Selecting previously unselected package libopenmpi3t64:amd64. Preparing to unpack .../62-libopenmpi3t64_5.0.5-3_amd64.deb ... Unpacking libopenmpi3t64:amd64 (5.0.5-3) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../63-openmpi-common_5.0.5-3_all.deb ... Unpacking openmpi-common (5.0.5-3) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../64-openmpi-bin_5.0.5-3_amd64.deb ... Unpacking openmpi-bin (5.0.5-3) ... Selecting previously unselected package mpi-default-bin. Preparing to unpack .../65-mpi-default-bin_1.17_amd64.deb ... Unpacking mpi-default-bin (1.17) ... Selecting previously unselected package libgenomicsdb1. Preparing to unpack .../66-libgenomicsdb1_1.5.4-1_amd64.deb ... Unpacking libgenomicsdb1 (1.5.4-1) ... Selecting previously unselected package piuparts-depends-dummy. Preparing to unpack .../67-piuparts-depends-dummy.deb ... Unpacking piuparts-depends-dummy (0.invalid.0) ... Setting up libpciaccess0:amd64 (0.17-3+b2) ... Setting up libprotobuf32t64:amd64 (3.21.12-10) ... Setting up libxau6:amd64 (1:1.0.11-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b2) ... Setting up libkeyutils1:amd64 (1.6.3-4) ... Setting up libxcb1:amd64 (1.17.0-2+b1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up libmuparserx4.0.12:amd64 (4.0.12-2) ... Setting up libcbor0.10:amd64 (0.10.2-2) ... Setting up libbrotli1:amd64 (1.1.0-2+b5) ... Setting up libedit2:amd64 (3.1-20240808-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:amd64 (1.64.0-1) ... Setting up libibumad3:amd64 (52.0-2+b1) ... Setting up libibmad5:amd64 (52.0-2+b1) ... Setting up libgomp1:amd64 (14.2.0-7) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up libz3-4:amd64 (4.8.12-3.1+b3) ... Setting up libmunge2:amd64 (0.5.15-4+b1) ... Setting up libx11-data (2:1.8.10-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libhwloc15:amd64 (2.11.2-1) ... Setting up libatomic1:amd64 (14.2.0-7) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up libfmt9:amd64 (9.1.0+ds1-2) ... Setting up libnuma1:amd64 (2.0.18-1+b1) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b2) ... Setting up libnl-3-200:amd64 (3.7.0-0.3+b1) ... Setting up libpsm2-2 (11.2.185-2.1) ... Setting up openmpi-common (5.0.5-3) ... Setting up libx11-6:amd64 (2:1.8.10-1) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libfido2-1:amd64 (1.15.0-1+b1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b1) ... Setting up libllvm17t64:amd64 (1:17.0.6-18) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libibverbs1:amd64 (52.0-2+b1) ... Setting up libcurl4t64:amd64 (8.10.1-2) ... Setting up ibverbs-providers:amd64 (52.0-2+b1) ... Setting up openssh-client (1:9.9p1-3) ... Setting up libhwloc-plugins:amd64 (2.11.2-1) ... Setting up libpmix2t64:amd64 (5.0.3-2+b1) ... Setting up librdmacm1t64:amd64 (52.0-2+b1) ... Setting up libhsakmt1:amd64 (6.1.2+ds-1) ... Setting up libfabric1:amd64 (1.17.0-3.1) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-2) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up libopenmpi3t64:amd64 (5.0.5-3) ... Setting up openmpi-bin (5.0.5-3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpirun.1.gz because associated file /usr/share/man/man1/mpirun.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up mpi-default-bin (1.17) ... Setting up libgenomicsdb1 (1.5.4-1) ... Setting up piuparts-depends-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... 0m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 0m20.5s INFO: Installation of ['./tmp/piuparts-depends-dummy.deb'] ok 0m20.5s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmp6mhk1zw6/./tmp/piuparts-depends-dummy.deb 0m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m20.5s DUMP: piuparts-depends-dummy install ok installed 0m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m20.5s DUMP: (Reading database ... 6710 files and directories currently installed.) Removing piuparts-depends-dummy (0.invalid.0) ... 0m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'clean'] 0m20.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'clean'] 0m20.6s DEBUG: Recording chroot state 0m21.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m21.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m22.8s ERROR: WARN: Broken symlinks: /usr/share/man/man1/mpirun.openmpi.1 -> mpiexec.openmpi.1 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy'] 0m23.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m23.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy'] 0m23.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy', 'libgenomicsdb-dev'] 0m23.7s DUMP: libgenomicsdb-dev: Installed: (none) Candidate: 1.5.4-1 Version table: 1.5.4-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m23.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy', 'libgenomicsdb-dev'] 0m23.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-y', 'install', 'libgenomicsdb-dev=1.5.4-1'] 0m25.1s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libgenomicsdb-dev 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 2243 kB of archives. After this operation, 27.1 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libgenomicsdb-dev amd64 1.5.4-1 [2243 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2243 kB in 0s (30.0 MB/s) Selecting previously unselected package libgenomicsdb-dev. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6710 files and directories currently installed.) Preparing to unpack .../libgenomicsdb-dev_1.5.4-1_amd64.deb ... Unpacking libgenomicsdb-dev (1.5.4-1) ... Setting up libgenomicsdb-dev (1.5.4-1) ... 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-y', 'install', 'libgenomicsdb-dev=1.5.4-1'] 0m25.1s INFO: Running scripts post_install 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_install_exceptions'] 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_install_exceptions'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'remove', 'libgenomicsdb-dev'] 0m26.3s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: ibverbs-providers libamd-comgr2 libamdhip64-5 libatomic1 libbrotli1 libcbor0.10 libcurl4t64 libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libevent-core-2.1-7t64 libevent-pthreads-2.1-7t64 libfabric1 libfido2-1 libfmt9 libgenomicsdb1 libgomp1 libgssapi-krb5-2 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs1 libicu72 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libllvm17t64 libmunge2 libmuparserx4.0.12 libnghttp2-14 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi3t64 libpciaccess0 libpmix2t64 libprotobuf32t64 libpsl5t64 libpsm-infinipath1 libpsm2-2 librdmacm1t64 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1t64 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 libz3-4 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libgenomicsdb-dev 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. After this operation, 27.1 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6756 files and directories currently installed.) Removing libgenomicsdb-dev (1.5.4-1) ... 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'remove', 'libgenomicsdb-dev'] 0m26.3s INFO: Reinstalling after remove 0m26.3s INFO: Running scripts pre_install 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_database-server'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_database-server'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_exceptions'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_exceptions'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_extras'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_extras'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy'] 0m26.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy'] 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy', 'libgenomicsdb-dev'] 0m26.4s DUMP: libgenomicsdb-dev: Installed: (none) Candidate: 1.5.4-1 Version table: 1.5.4-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy', 'libgenomicsdb-dev'] 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-y', 'install', 'libgenomicsdb-dev=1.5.4-1'] 0m27.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libgenomicsdb-dev debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/2243 kB of archives. After this operation, 27.1 MB of additional disk space will be used. Selecting previously unselected package libgenomicsdb-dev. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6710 files and directories currently installed.) Preparing to unpack .../libgenomicsdb-dev_1.5.4-1_amd64.deb ... Unpacking libgenomicsdb-dev (1.5.4-1) ... Setting up libgenomicsdb-dev (1.5.4-1) ... 0m27.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-y', 'install', 'libgenomicsdb-dev=1.5.4-1'] 0m27.8s INFO: Running scripts post_install 0m27.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_install_exceptions'] 0m27.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_install_exceptions'] 0m27.8s INFO: Running scripts pre_install 0m27.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_database-server'] 0m27.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_database-server'] 0m27.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_exceptions'] 0m27.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_exceptions'] 0m27.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_extras'] 0m27.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_extras'] 0m27.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture'] 0m27.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture'] 0m27.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m27.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m27.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy'] 0m27.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m27.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy'] 0m27.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy', 'libgenomicsdb-dev'] 0m28.0s DUMP: libgenomicsdb-dev: Installed: 1.5.4-1 Candidate: 1.5.4-1 Version table: *** 1.5.4-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m28.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-cache', 'policy', 'libgenomicsdb-dev'] 0m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-y', 'install', '--reinstall', 'libgenomicsdb-dev=1.5.4-1'] 0m29.3s DUMP: Reading package lists... Building dependency tree... Reading state information... debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 0 newly installed, 1 reinstalled, 0 to remove and 0 not upgraded. Need to get 0 B/2243 kB of archives. After this operation, 0 B of additional disk space will be used. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6756 files and directories currently installed.) Preparing to unpack .../libgenomicsdb-dev_1.5.4-1_amd64.deb ... Unpacking libgenomicsdb-dev (1.5.4-1) over (1.5.4-1) ... Setting up libgenomicsdb-dev (1.5.4-1) ... 0m29.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', '-y', 'install', '--reinstall', 'libgenomicsdb-dev=1.5.4-1'] 0m29.3s INFO: Running scripts post_install 0m29.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_install_exceptions'] 0m29.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_install_exceptions'] 0m29.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m29.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m30.7s ERROR: WARN: Broken symlinks: /usr/share/man/man1/mpirun.openmpi.1 -> mpiexec.openmpi.1 (openmpi-bin) 0m31.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', '-ac', '--ignore-obsolete'] 0m32.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', '-ac', '--ignore-obsolete'] 0m32.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m33.0s DUMP: 0.15.6 0m33.0s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m33.0s INFO: Running adequate version 0.15.6 now. 0m33.0s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'libgenomicsdb-dev'] 0m33.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'libgenomicsdb-dev'] 0m33.1s INFO: Running scripts pre_remove 0m33.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m33.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m33.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m33.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m33.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m35.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m35.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m35.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m35.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_exceptions'] 0m35.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_exceptions'] 0m35.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_preseed_cleanup'] 0m35.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/pre_remove_preseed_cleanup'] 0m35.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m35.2s DUMP: install ok installed adduser adduser 3.137 install ok installed apt apt 2.9.10 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.32-1+b2 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-9 install ok installed dbconfig-common dbconfig-common 2.0.24 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1+b1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-7 install ok installed gpgv gpgv 2.2.45-2 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed ibverbs-providers:amd64 ibverbs-providers 52.0-2+b1 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libamd-comgr2:amd64 libamd-comgr2 6.0+git20231212.4510c28+dfsg-3+b2 install ok installed libamdhip64-5 libamdhip64-5 5.7.1-5 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.10 install ok installed libatomic1:amd64 libatomic1 14.2.0-7 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.1-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.1-2 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b5 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-3 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcbor0.10:amd64 libcbor0.10 0.10.2-2 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libcurl4t64:amd64 libcurl4t64 8.10.1-2 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272+b1 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.123-1 install ok installed libdrm-common libdrm-common 2.4.123-1 install ok installed libdrm2:amd64 libdrm2 2.4.123-1 install ok installed libedit2:amd64 libedit2 3.1-20240808-1 install ok installed libelf1t64:amd64 libelf1t64 0.192-4 install ok installed libevent-core-2.1-7t64:amd64 libevent-core-2.1-7t64 2.1.12-stable-10+b1 install ok installed libevent-pthreads-2.1-7t64:amd64 libevent-pthreads-2.1-7t64 2.1.12-stable-10+b1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1+b1 install ok installed libfabric1:amd64 libfabric1 1.17.0-3.1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libfido2-1:amd64 libfido2-1 1.15.0-1+b1 install ok installed libfmt9:amd64 libfmt9 9.1.0+ds1-2 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-7 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgenomicsdb-dev libgenomicsdb-dev 1.5.4-1 install ok installed libgenomicsdb1 libgenomicsdb1 1.5.4-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b2 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2+b1 install ok installed libgomp1:amd64 libgomp1 14.2.0-7 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libhsa-runtime64-1:amd64 libhsa-runtime64-1 6.1.2-2 install ok installed libhsakmt1:amd64 libhsakmt1 6.1.2+ds-1 install ok installed libhwloc-plugins:amd64 libhwloc-plugins 2.11.2-1 install ok installed libhwloc15:amd64 libhwloc15 2.11.2-1 install ok installed libibmad5:amd64 libibmad5 52.0-2+b1 install ok installed libibumad3:amd64 libibumad3 52.0-2+b1 install ok installed libibverbs1:amd64 libibverbs1 52.0-2+b1 install ok installed libicu72:amd64 libicu72 72.1-5+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-4 install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-3 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.18+dfsg-3+b1 install ok installed libllvm17t64:amd64 libllvm17t64 1:17.0.6-18 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libmunge2:amd64 libmunge2 0.5.15-4+b1 install ok installed libmuparserx4.0.12:amd64 libmuparserx4.0.12 4.0.12-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.64.0-1 install ok installed libnl-3-200:amd64 libnl-3-200 3.7.0-0.3+b1 install ok installed libnl-route-3-200:amd64 libnl-route-3-200 3.7.0-0.3+b1 install ok installed libnuma1:amd64 libnuma1 2.0.18-1+b1 install ok installed libopenmpi3t64:amd64 libopenmpi3t64 5.0.5-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2+b1 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpciaccess0:amd64 libpciaccess0 0.17-3+b2 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b2 install ok installed libpmix2t64:amd64 libpmix2t64 5.0.3-2+b1 install ok installed libprotobuf32t64:amd64 libprotobuf32t64 3.21.12-10 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.2-1.1+b1 install ok installed libpsm-infinipath1 libpsm-infinipath1 3.3+20.604758e7-6.3 install ok installed libpsm2-2 libpsm2-2 11.2.185-2.1 install ok installed librdmacm1t64:amd64 librdmacm1t64 52.0-2+b1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b5 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-8 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-8 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b2 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libss2:amd64 libss2 1.47.1-1+b1 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-7 install ok installed libsystemd0:amd64 libsystemd0 256.7-3 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libucx0:amd64 libucx0 1.17.0+ds-3 install ok installed libudev1:amd64 libudev1 256.7-3 install ok installed libunistring5:amd64 libunistring5 1.2-1+b1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libx11-6:amd64 libx11-6 2:1.8.10-1 install ok installed libx11-data libx11-data 2:1.8.10-1 install ok installed libxau6:amd64 libxau6 1:1.0.11-1 install ok installed libxcb1:amd64 libxcb1 1.17.0-2+b1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3+b2 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b2 install ok installed libxml2:amd64 libxml2 2.12.7+dfsg+really2.9.14-0.1 install ok installed libxnvctrl0:amd64 libxnvctrl0 535.171.04-1+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libz3-4:amd64 libz3-4 4.8.12-3.1+b3 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1+b1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-9 install ok installed mpi-default-bin mpi-default-bin 1.17 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.3.2-1+b2 install ok installed openmpi-bin openmpi-bin 5.0.5-3 install ok installed openmpi-common openmpi-common 5.0.5-3 install ok installed openssh-client openssh-client 1:9.9p1-3 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.40.0-6 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.24 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-3 install ok installed ucf ucf 3.0043+nmu1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m35.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m35.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'remove', 'adduser', 'ibverbs-providers:amd64', 'libamd-comgr2:amd64', 'libamdhip64-5', 'libatomic1:amd64', 'libbrotli1:amd64', 'libcbor0.10:amd64', 'libcurl4t64:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libfabric1:amd64', 'libfido2-1:amd64', 'libfmt9:amd64', 'libgenomicsdb1', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'libicu72:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libllvm17t64:amd64', 'libmunge2:amd64', 'libmuparserx4.0.12:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi3t64:amd64', 'libpciaccess0:amd64', 'libpmix2t64:amd64', 'libprotobuf32t64:amd64', 'libpsl5t64:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'librdmacm1t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssh2-1t64:amd64', 'libucx0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'libgenomicsdb-dev'] 0m36.7s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: adduser ibverbs-providers libamd-comgr2 libamdhip64-5 libatomic1 libbrotli1 libcbor0.10 libcurl4t64 libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libevent-core-2.1-7t64 libevent-pthreads-2.1-7t64 libfabric1 libfido2-1 libfmt9 libgenomicsdb-dev libgenomicsdb1 libgomp1 libgssapi-krb5-2 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs1 libicu72 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libllvm17t64 libmunge2 libmuparserx4.0.12 libnghttp2-14 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi3t64 libpciaccess0 libpmix2t64 libprotobuf32t64 libpsl5t64 libpsm-infinipath1 libpsm2-2 librdmacm1t64 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1t64 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 libz3-4 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client 0 upgraded, 0 newly installed, 69 to remove and 0 not upgraded. After this operation, 359 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6756 files and directories currently installed.) Removing libgenomicsdb-dev (1.5.4-1) ... Removing libgenomicsdb1 (1.5.4-1) ... Removing mpi-default-bin (1.17) ... Removing openmpi-bin (5.0.5-3) ... Removing libopenmpi3t64:amd64 (5.0.5-3) ... Removing libucx0:amd64 (1.17.0+ds-3) ... Removing libfabric1:amd64 (1.17.0-3.1) ... Removing librdmacm1t64:amd64 (52.0-2+b1) ... Removing openssh-client (1:9.9p1-3) ... Removing ibverbs-providers:amd64 (52.0-2+b1) ... Removing libamdhip64-5 (5.7.1-5) ... Removing libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Removing libatomic1:amd64 (14.2.0-7) ... Removing libcurl4t64:amd64 (8.10.1-2) ... Removing libbrotli1:amd64 (1.1.0-2+b5) ... Removing libfido2-1:amd64 (1.15.0-1+b1) ... Removing libcbor0.10:amd64 (0.10.2-2) ... Removing libhsa-runtime64-1:amd64 (6.1.2-2) ... Removing libhsakmt1:amd64 (6.1.2+ds-1) ... Removing libdrm-amdgpu1:amd64 (2.4.123-1) ... Removing libdrm2:amd64 (2.4.123-1) ... Removing libdrm-common (2.4.123-1) ... Removing libllvm17t64:amd64 (1:17.0.6-18) ... Removing libedit2:amd64 (3.1-20240808-1) ... Removing libelf1t64:amd64 (0.192-4) ... Removing libpmix2t64:amd64 (5.0.3-2+b1) ... Removing libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Removing libevent-core-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Removing libfmt9:amd64 (9.1.0+ds1-2) ... Removing libgomp1:amd64 (14.2.0-7) ... Removing libgssapi-krb5-2:amd64 (1.21.3-3) ... Removing libhwloc-plugins:amd64 (2.11.2-1) ... Removing libhwloc15:amd64 (2.11.2-1) ... Removing libibmad5:amd64 (52.0-2+b1) ... Removing libibumad3:amd64 (52.0-2+b1) ... Removing libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Removing libicu72:amd64 (72.1-5+b1) ... Removing libkrb5-3:amd64 (1.21.3-3) ... Removing libk5crypto3:amd64 (1.21.3-3) ... Removing libkeyutils1:amd64 (1.6.3-4) ... Removing libkrb5support0:amd64 (1.21.3-3) ... Removing libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Removing libmunge2:amd64 (0.5.15-4+b1) ... Removing libmuparserx4.0.12:amd64 (4.0.12-2) ... Removing libnghttp2-14:amd64 (1.64.0-1) ... Removing libpsm2-2 (11.2.185-2.1) ... Removing libnuma1:amd64 (2.0.18-1+b1) ... Removing libpciaccess0:amd64 (0.17-3+b2) ... Removing libprotobuf32t64:amd64 (3.21.12-10) ... Removing libpsl5t64:amd64 (0.21.2-1.1+b1) ... Removing libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: warning: alternative /usr/lib/libpsm1/libpsm_infinipath.so.1.16 (part of link group libpsm_infinipath.so.1) doesn't exist; removing from list of alternatives update-alternatives: warning: /etc/alternatives/libpsm_infinipath.so.1 is dangling; it will be updated with best choice Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Removing libssh2-1t64:amd64 (1.11.1-1) ... Removing libxnvctrl0:amd64 (535.171.04-1+b1) ... Removing libxext6:amd64 (2:1.3.4-1+b2) ... Removing libx11-6:amd64 (2:1.8.10-1) ... Removing libx11-data (2:1.8.10-1) ... Removing libxcb1:amd64 (1.17.0-2+b1) ... Removing libxau6:amd64 (1:1.0.11-1) ... Removing libxdmcp6:amd64 (1:1.1.2-3+b2) ... Removing libz3-4:amd64 (4.8.12-3.1+b3) ... Removing ocl-icd-libopencl1:amd64 (2.3.2-1+b2) ... Removing openmpi-common (5.0.5-3) ... Removing libibverbs1:amd64 (52.0-2+b1) ... Removing adduser (3.137) ... Removing libnl-route-3-200:amd64 (3.7.0-0.3+b1) ... Removing libnl-3-200:amd64 (3.7.0-0.3+b1) ... Processing triggers for libc-bin (2.40-3) ... 0m36.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'remove', 'adduser', 'ibverbs-providers:amd64', 'libamd-comgr2:amd64', 'libamdhip64-5', 'libatomic1:amd64', 'libbrotli1:amd64', 'libcbor0.10:amd64', 'libcurl4t64:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libfabric1:amd64', 'libfido2-1:amd64', 'libfmt9:amd64', 'libgenomicsdb1', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'libicu72:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libllvm17t64:amd64', 'libmunge2:amd64', 'libmuparserx4.0.12:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi3t64:amd64', 'libpciaccess0:amd64', 'libpmix2t64:amd64', 'libprotobuf32t64:amd64', 'libpsl5t64:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'librdmacm1t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssh2-1t64:amd64', 'libucx0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'libgenomicsdb-dev'] 0m36.7s INFO: Running scripts post_remove 0m36.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_remove_cleanup'] 0m36.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_remove_cleanup'] 0m36.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_remove_exceptions'] 0m36.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_remove_exceptions'] 0m36.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--purge', 'adduser', 'ibverbs-providers:amd64', 'libamd-comgr2:amd64', 'libamdhip64-5', 'libatomic1:amd64', 'libbrotli1:amd64', 'libcbor0.10:amd64', 'libcurl4t64:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libfabric1:amd64', 'libfido2-1:amd64', 'libfmt9:amd64', 'libgenomicsdb1', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'libicu72:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libllvm17t64:amd64', 'libmunge2:amd64', 'libmuparserx4.0.12:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi3t64:amd64', 'libpciaccess0:amd64', 'libpmix2t64:amd64', 'libprotobuf32t64:amd64', 'libpsl5t64:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'librdmacm1t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssh2-1t64:amd64', 'libucx0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client'] 0m36.7s DUMP: (Reading database ... 5537 files and directories currently installed.) Purging configuration files for adduser (3.137) ... Purging configuration files for ibverbs-providers:amd64 (52.0-2+b1) ... dpkg: warning: ignoring request to remove libamd-comgr2 which isn't installed dpkg: warning: ignoring request to remove libamdhip64-5 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libcbor0.10 which isn't installed dpkg: warning: ignoring request to remove libcurl4t64 which isn't installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which isn't installed dpkg: warning: ignoring request to remove libdrm-common which isn't installed dpkg: warning: ignoring request to remove libdrm2 which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libelf1t64 which isn't installed dpkg: warning: ignoring request to remove libevent-core-2.1-7t64 which isn't installed dpkg: warning: ignoring request to remove libevent-pthreads-2.1-7t64 which isn't installed dpkg: warning: ignoring request to remove libfabric1 which isn't installed dpkg: warning: ignoring request to remove libfido2-1 which isn't installed dpkg: warning: ignoring request to remove libfmt9 which isn't installed dpkg: warning: ignoring request to remove libgenomicsdb1 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.21.3-3) ... dpkg: warning: ignoring request to remove libhsa-runtime64-1 which isn't installed dpkg: warning: ignoring request to remove libhsakmt1 which isn't installed dpkg: warning: ignoring request to remove libhwloc-plugins which isn't installed dpkg: warning: ignoring request to remove libhwloc15 which isn't installed dpkg: warning: ignoring request to remove libibmad5 which isn't installed dpkg: warning: ignoring request to remove libibumad3 which isn't installed dpkg: warning: ignoring request to remove libibverbs1 which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove libllvm17t64 which isn't installed dpkg: warning: ignoring request to remove libmunge2 which isn't installed dpkg: warning: ignoring request to remove libmuparserx4.0.12 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed Purging configuration files for libnl-3-200:amd64 (3.7.0-0.3+b1) ... dpkg: warning: ignoring request to remove libnl-route-3-200 which isn't installed dpkg: warning: ignoring request to remove libnuma1 which isn't installed dpkg: warning: ignoring request to remove libopenmpi3t64 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libpmix2t64 which isn't installed dpkg: warning: ignoring request to remove libprotobuf32t64 which isn't installed dpkg: warning: ignoring request to remove libpsl5t64 which isn't installed Purging configuration files for libpsm-infinipath1 (3.3+20.604758e7-6.3) ... dpkg: warning: ignoring request to remove libpsm2-2 which isn't installed dpkg: warning: ignoring request to remove librdmacm1t64 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libssh2-1t64 which isn't installed dpkg: warning: ignoring request to remove libucx0 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxnvctrl0 which isn't installed dpkg: warning: ignoring request to remove libz3-4 which isn't installed dpkg: warning: ignoring request to remove mpi-default-bin which isn't installed dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which isn't installed Purging configuration files for openmpi-bin (5.0.5-3) ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed Purging configuration files for openssh-client (1:9.9p1-3) ... 0m36.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--purge', 'adduser', 'ibverbs-providers:amd64', 'libamd-comgr2:amd64', 'libamdhip64-5', 'libatomic1:amd64', 'libbrotli1:amd64', 'libcbor0.10:amd64', 'libcurl4t64:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libfabric1:amd64', 'libfido2-1:amd64', 'libfmt9:amd64', 'libgenomicsdb1', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'libicu72:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libllvm17t64:amd64', 'libmunge2:amd64', 'libmuparserx4.0.12:amd64', 'libnghttp2-14:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi3t64:amd64', 'libpciaccess0:amd64', 'libpmix2t64:amd64', 'libprotobuf32t64:amd64', 'libpsl5t64:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'librdmacm1t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libssh2-1t64:amd64', 'libucx0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client'] 0m36.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--purge', 'libgenomicsdb-dev'] 0m36.7s DUMP: dpkg: warning: ignoring request to remove libgenomicsdb-dev which isn't installed 0m36.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--purge', 'libgenomicsdb-dev'] 0m36.8s INFO: Running scripts post_purge 0m36.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_purge_exceptions'] 0m36.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_purge_exceptions'] 0m36.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_purge_manual_cleanup'] 0m36.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_purge_manual_cleanup'] 0m36.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--purge', '--pending'] 0m36.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--purge', '--pending'] 0m36.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--remove', '--pending'] 0m36.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg', '--remove', '--pending'] 0m36.8s INFO: Running scripts post_test 0m36.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_test_exceptions'] 0m36.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'tmp/scripts/post_test_exceptions'] 0m36.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m37.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m38.0s DEBUG: No broken symlinks as far as we can find. 0m38.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-divert', '--list'] 0m38.0s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m38.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'dpkg-divert', '--list'] 0m38.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'clean'] 0m38.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6', 'apt-get', 'clean'] 0m38.0s DEBUG: Recording chroot state 0m38.8s INFO: PASS: Installation and purging test. 0m39.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/shm'] 0m39.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/shm'] 0m39.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/console'] 0m39.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/console'] 0m39.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/ptmx'] 0m39.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/ptmx'] 0m39.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/pts'] 0m39.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/dev/pts'] 0m39.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/proc'] 0m39.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6/proc'] 0m39.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m39.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6mhk1zw6'] 0m39.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp6mhk1zw6 0m39.6s INFO: PASS: All tests. 0m39.6s INFO: piuparts run ends. ret=0 End: 2024-11-01 22:34:40 GMT