Start: 2024-09-05 04:37:21 GMT Package: libgoby-io-java Source: libgoby-java Version: 3.3.1+dfsg2-11 Installed-Size: 1061 Maintainer: Debian Med Packaging Team Architecture: all Depends: libcommons-cli-java (>= 1.6.0), libcommons-configuration-java, libcommons-exec-java (>= 1.3), libcommons-io-java (>= 2.16.1), libcommons-lang-java (>= 2.6), libcommons-logging-java (>= 1.3.0), libcommons-math-java (>= 2.2), libdsiutils-java, libfastutil-java, libguava-java, libhtsjdk-java (>= 3.0.2), libicb-utils-java, libjsap-java (>= 2.1), libprotobuf-java, libreflections-java, libslf4j-java (>= 1.7.32), libxstream-java (>= 1.4.20), libcommons-collections3-java, libjbzip2-java, libpj-java Description: IO API for goby Homepage: https://campagnelab.org/software/goby/ Description-md5: 6c3e2bddb6329f40650bd9c463399fbd Section: science Priority: optional Filename: pool/main/libg/libgoby-java/libgoby-io-java_3.3.1+dfsg2-11_all.deb Size: 977164 MD5sum: b71b84c9d94277d39e32a609ee873366 SHA256: 735f6111a91aa21361ab2a873347928ff0e2a3aa8e44e9319422335b44c7bfff Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt libgoby-io-java=3.3.1+dfsg2-11 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.4~202408201135~1.4.3-10-g39df1906 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt libgoby-io-java=3.3.1+dfsg2-11 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-32-amd64 #1 SMP Debian 5.10.223-1 (2024-08-10) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpd172eqji 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpd172eqji 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpd172eqji', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpd172eqji', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpd172eqji/proc'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpd172eqji/proc'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/pts'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/pts'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/ptmx'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/ptmx'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/console'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/console'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/shm'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/shm'] 0m0.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.2s DEBUG: Created policy-rc.d and chmodded it. 0m0.2s DEBUG: Created resolv.conf. 0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpd172eqji/tmp/scripts/ 0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts-leftovers to /srv/piuparts.debian.org/tmp/tmpd172eqji/tmp/scripts/ 0m0.2s INFO: Running scripts post_chroot_unpack 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'update'] 0m2.2s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [198 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9946 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7293 kB] Fetched 17.4 MB in 2s (11.4 MB/s) Reading package lists... 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'update'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.7s DUMP: 84505f6d8950408ef5ae95310966878c - 0m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.7s INFO: Running scripts post_setup 0m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_dummy_users'] 0m3.1s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_dummy_users'] 0m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_fake-essential'] 0m3.8s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... init-system-helpers is already the newest version (1.66). The following additional packages will be installed: sensible-utils ucf Suggested packages: dbconfig-mysql | dbconfig-pgsql | dbconfig-sqlite3 | dbconfig-no-thanks The following NEW packages will be installed: dbconfig-common sensible-utils ucf 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 672 kB of archives. After this operation, 1826 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:2 http://deb.debian.org/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:3 http://deb.debian.org/debian sid/main amd64 dbconfig-common all 2.0.24 [592 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 672 kB in 0s (33.1 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5129 files and directories currently installed.) Preparing to unpack .../sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package ucf. Preparing to unpack .../ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package dbconfig-common. Preparing to unpack .../dbconfig-common_2.0.24_all.deb ... Unpacking dbconfig-common (2.0.24) ... Setting up sensible-utils (0.0.24) ... Setting up ucf (3.0043+nmu1) ... Setting up dbconfig-common (2.0.24) ... Creating config file /etc/dbconfig-common/config with new version 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_fake-essential'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_forbid_home'] 0m3.8s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_forbid_home'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.8s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_minimize'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_minimize'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_zz_backports'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_setup_zz_backports'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'clean'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'clean'] 0m3.8s DEBUG: Recording chroot state 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.1s DUMP: install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1 install ok installed bsdutils bsdutils 1:2.40.2-7 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed dbconfig-common dbconfig-common 2.0.24 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-4 install ok installed gpgv gpgv 2.2.43-8 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:4.0.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.0.1-1 install ok installed libblkid1:amd64 libblkid1 2.40.2-7 install ok installed libbsd0:amd64 libbsd0 0.12.2-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-2 install ok installed libc6:amd64 libc6 2.40-2 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-4 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-7 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-7 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-4 install ok installed libsystemd0:amd64 libsystemd0 256.5-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.5-2 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-7 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-7 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240819-3 install ok installed mount mount 2.40.2-7 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.24 install ok installed sysvinit-utils sysvinit-utils 3.10-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed ucf ucf 3.0043+nmu1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-7 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-divert', '--list'] 0m4.1s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-divert', '--list'] 0m4.1s INFO: Running scripts is_testable 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/is_testable_uninstallable'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/is_testable_uninstallable'] 0m4.1s INFO: apt-cache does not know about any of the requested packages 0m4.1s INFO: Running scripts pre_test 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_test_exceptions'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_test_exceptions'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_test_root_password'] 0m4.1s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_test_root_password'] 0m4.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m4.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m4.6s DEBUG: No broken symlinks as far as we can find. 0m4.6s INFO: Running scripts pre_install 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_database-server'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_database-server'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_exceptions'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_exceptions'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_extras'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_extras'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'show', '--no-all-versions', 'libgoby-io-java=3.3.1+dfsg2-11'] 0m5.1s DUMP: Package: libgoby-io-java Source: libgoby-java Version: 3.3.1+dfsg2-11 Installed-Size: 1061 Maintainer: Debian Med Packaging Team Architecture: all Depends: libcommons-cli-java (>= 1.6.0), libcommons-configuration-java, libcommons-exec-java (>= 1.3), libcommons-io-java (>= 2.16.1), libcommons-lang-java (>= 2.6), libcommons-logging-java (>= 1.3.0), libcommons-math-java (>= 2.2), libdsiutils-java, libfastutil-java, libguava-java, libhtsjdk-java (>= 3.0.2), libicb-utils-java, libjsap-java (>= 2.1), libprotobuf-java, libreflections-java, libslf4j-java (>= 1.7.32), libxstream-java (>= 1.4.20), libcommons-collections3-java, libjbzip2-java, libpj-java Description-en: IO API for goby Goby is a next-gen data management framework designed to facilitate the implementation of efficient data analysis pipelines. . Goby provides very efficient file formats to store next-generation sequencing data and intermediary analysis results. . This package contains the Goby IO API, including code necessary to read and write Goby file formats. It is released under the LGPL3 license. Description-md5: 6c3e2bddb6329f40650bd9c463399fbd Homepage: https://campagnelab.org/software/goby/ Section: science Priority: optional Filename: pool/main/libg/libgoby-java/libgoby-io-java_3.3.1+dfsg2-11_all.deb Size: 977164 MD5sum: b71b84c9d94277d39e32a609ee873366 SHA256: 735f6111a91aa21361ab2a873347928ff0e2a3aa8e44e9319422335b44c7bfff 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'show', '--no-all-versions', 'libgoby-io-java=3.3.1+dfsg2-11'] 0m5.1s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Depends: libcommons-cli-java (>= 1.6.0), libcommons-configuration-java, libcommons-exec-java (>= 1.3), libcommons-io-java (>= 2.16.1), libcommons-lang-java (>= 2.6), libcommons-logging-java (>= 1.3.0), libcommons-math-java (>= 2.2), libdsiutils-java, libfastutil-java, libguava-java, libhtsjdk-java (>= 3.0.2), libicb-utils-java, libjsap-java (>= 2.1), libprotobuf-java, libreflections-java, libslf4j-java (>= 1.7.32), libxstream-java (>= 1.4.20), libcommons-collections3-java, libjbzip2-java, libpj-java Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed 0m5.1s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmppm_ezqp7/piuparts-depends-dummy'] 0m5.1s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmppm_ezqp7/piuparts-depends-dummy.deb'. 0m5.1s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmppm_ezqp7/piuparts-depends-dummy'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m5.1s DUMP: 2.9.8 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m5.1s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmppm_ezqp7/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmpd172eqji/tmp 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 0m19.4s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ant ca-certificates ca-certificates-java default-jre-headless java-common libapache-pom-java libatinject-jsr330-api-java libcolt-free-java libcommons-beanutils-java libcommons-cli-java libcommons-collections3-java libcommons-compress-java libcommons-configuration-java libcommons-exec-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-logging-java libcommons-math-java libcommons-math3-java libcommons-parent-java libdom4j-java libdsiutils-java liberror-prone-java libfastutil-java libgoogle-gson-java libguava-java libhamcrest-java libhtsjdk-java libicb-utils-java libicu4j-java libjavassist-java libjaxen-java libjboss-logging-java libjboss-vfs-java libjbzip2-java libjpeg62-turbo libjsap-java libjsr305-java liblcms2-2 liblog4j1.2-java liblogback-java libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmjson-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni libnspr4 libnss3 libpcsclite1 libpj-java libprotobuf-java libreflections-java librhino-java libservlet-api-java libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 libsqlite3-0 libxpp3-java libxstream-java ncbi-vdb-data openjdk-21-jre-headless openssl Suggested packages: ant-doc default-jdk | java-compiler | java-sdk default-jre libatinject-jsr330-api-java-doc libcommons-collections3-java-doc libasm-java libxz-java libcommons-codec-java libcommons-digester-java libcommons-jxpath-java libcommons-vfs-java libxml-commons-resolver1.1-java libcommons-lang-java-doc libavalon-framework-java libexcalibur-logkit-java libmsv-java libxpp2-java libgoogle-gson-java-doc picard-tools python3 libjdom1-java libxom-java libjboss-logging-java-doc libjsap-java-doc libjsr305-java-doc liblcms2-utils liblog4j1.2-java-doc libmail-java libjanino-java libjansi-java libjetty9-java libtomcat9-java libngs-java-doc pcscd rhino libcglib-nodep-java libjdom2-java libjettison-java libjoda-time-java libkxml2-java libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic Recommended packages: ant-optional libcups2t64 libfontconfig1 libfreetype6 libharfbuzz0b libasound2t64 The following NEW packages will be installed: ant ca-certificates ca-certificates-java default-jre-headless java-common libapache-pom-java libatinject-jsr330-api-java libcolt-free-java libcommons-beanutils-java libcommons-cli-java libcommons-collections3-java libcommons-compress-java libcommons-configuration-java libcommons-exec-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-logging-java libcommons-math-java libcommons-math3-java libcommons-parent-java libdom4j-java libdsiutils-java liberror-prone-java libfastutil-java libgoogle-gson-java libguava-java libhamcrest-java libhtsjdk-java libicb-utils-java libicu4j-java libjavassist-java libjaxen-java libjboss-logging-java libjboss-vfs-java libjbzip2-java libjpeg62-turbo libjsap-java libjsr305-java liblcms2-2 liblog4j1.2-java liblogback-java libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmjson-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni libnspr4 libnss3 libpcsclite1 libpj-java libprotobuf-java libreflections-java librhino-java libservlet-api-java libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 libsqlite3-0 libxpp3-java libxstream-java ncbi-vdb-data openjdk-21-jre-headless openssl piuparts-depends-dummy 0 upgraded, 69 newly installed, 0 to remove and 0 not upgraded. Need to get 107 MB/107 MB of archives. After this operation, 290 MB of additional disk space will be used. Get:1 /tmp/piuparts-depends-dummy.deb piuparts-depends-dummy all 0.invalid.0 [808 B] Get:2 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.3.2-1 [1381 kB] Get:3 http://deb.debian.org/debian sid/main amd64 ca-certificates all 20240203 [158 kB] Get:4 http://deb.debian.org/debian sid/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get:5 http://deb.debian.org/debian sid/main amd64 java-common all 0.76 [6776 B] Get:6 http://deb.debian.org/debian sid/main amd64 liblcms2-2 amd64 2.14-2+b1 [154 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libnspr4 amd64 2:4.35-1.1+b1 [109 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libnss3 amd64 2:3.103-1 [1352 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libpcsclite1 amd64 2.3.0-1 [55.4 kB] Get:12 http://deb.debian.org/debian sid/main amd64 openjdk-21-jre-headless amd64 21.0.4+7-3 [42.0 MB] Get:13 http://deb.debian.org/debian sid/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get:14 http://deb.debian.org/debian sid/main amd64 ant all 1.10.14-1 [2162 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libapache-pom-java all 29-2 [5276 B] Get:16 http://deb.debian.org/debian sid/main amd64 libatinject-jsr330-api-java all 1.0+ds1-5 [5312 B] Get:17 http://deb.debian.org/debian sid/main amd64 libcolt-free-java all 1.2.0+dfsg-8 [440 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libcommons-collections3-java all 3.2.2-3 [530 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libcommons-beanutils-java all 1.9.4-2 [233 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB] 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8.5.14+dfsg-1 [19.8 MB] Get:34 http://deb.debian.org/debian sid/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libjsr305-java all 0.1~+svn49-11 [26.9 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libguava-java all 32.0.1-1 [2708 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libxpp3-java all 1.1.4c-3 [292 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libxstream-java all 1.4.20-1 [565 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libjsap-java all 2.1-5 [102 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libslf4j-java all 1.7.32-1 [144 kB] Get:41 http://deb.debian.org/debian sid/main amd64 liblogback-java all 1:1.2.11-5 [701 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libdsiutils-java all 2.7.3+dfsg-1 [524 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libgoogle-gson-java all 2.10.1-1 [262 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libhamcrest-java all 2.2-2 [121 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libmjson-java all 1.4.0-3 [60.4 kB] Get:46 http://deb.debian.org/debian sid/main amd64 libmbedcrypto7t64 amd64 2.28.8-1 [284 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libmbedx509-1t64 amd64 2.28.8-1 [131 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libmbedtls14t64 amd64 2.28.8-1 [167 kB] Get:49 http://deb.debian.org/debian sid/main amd64 ncbi-vdb-data all 3.0.2+dfsg-2 [73.3 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libncbi-vdb3 amd64 3.0.2+dfsg-2+b1 [1049 kB] Get:51 http://deb.debian.org/debian sid/main amd64 libncbi-ngs3 amd64 3.0.3+dfsg-9 [155 kB] Get:52 http://deb.debian.org/debian sid/main amd64 libngs-jni amd64 3.0.3+dfsg-9 [23.8 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libngs-java amd64 3.0.3+dfsg-9 [110 kB] Get:54 http://deb.debian.org/debian sid/main amd64 librhino-java all 1.7.14-2.1 [1357 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libsnappy1v5 amd64 1.2.1-1 [29.1 kB] Get:56 http://deb.debian.org/debian sid/main amd64 libsnappy-jni amd64 1.1.10.5-2 [6396 B] Get:57 http://deb.debian.org/debian sid/main amd64 libsnappy-java all 1.1.10.5-2 [87.5 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libhtsjdk-java all 4.1.0+dfsg-2 [1833 kB] Get:59 http://deb.debian.org/debian sid/main amd64 libicu4j-java all 73.2-1 [16.4 MB] Get:60 http://deb.debian.org/debian sid/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libicb-utils-java all 2.0.1+git20161002.afee1d9-5 [81.5 kB] Get:62 http://deb.debian.org/debian sid/main amd64 libjavassist-java all 1:3.27.0-1 [731 kB] Get:63 http://deb.debian.org/debian sid/main amd64 libjboss-logging-java all 3.5.3-1 [56.2 kB] Get:64 http://deb.debian.org/debian sid/main amd64 libjboss-vfs-java all 3.2.15.Final-3 [130 kB] Get:65 http://deb.debian.org/debian sid/main amd64 libjbzip2-java all 0.9.1-8 [42.7 kB] Get:66 http://deb.debian.org/debian sid/main amd64 libpj-java all 0.0~20150107+dfsg-5 [1389 kB] Get:67 http://deb.debian.org/debian sid/main amd64 libprotobuf-java all 3.21.12-9 [1260 kB] Get:68 http://deb.debian.org/debian sid/main amd64 libservlet-api-java all 4.0.1-2 [81.0 kB] Get:69 http://deb.debian.org/debian sid/main amd64 libreflections-java all 0.10.2+dfsg-2 [125 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 107 MB in 10s (11.2 MB/s) Selecting previously unselected package openssl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5481 files and directories currently installed.) Preparing to unpack .../00-openssl_3.3.2-1_amd64.deb ... Unpacking openssl (3.3.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../01-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package ca-certificates-java. Preparing to unpack .../02-ca-certificates-java_20240118_all.deb ... 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Unpacking libicb-utils-java (2.0.1+git20161002.afee1d9-5) ... Selecting previously unselected package libjavassist-java. Preparing to unpack .../60-libjavassist-java_1%3a3.27.0-1_all.deb ... Unpacking libjavassist-java (1:3.27.0-1) ... Selecting previously unselected package libjboss-logging-java. Preparing to unpack .../61-libjboss-logging-java_3.5.3-1_all.deb ... Unpacking libjboss-logging-java (3.5.3-1) ... Selecting previously unselected package libjboss-vfs-java. Preparing to unpack .../62-libjboss-vfs-java_3.2.15.Final-3_all.deb ... Unpacking libjboss-vfs-java (3.2.15.Final-3) ... Selecting previously unselected package libjbzip2-java. Preparing to unpack .../63-libjbzip2-java_0.9.1-8_all.deb ... Unpacking libjbzip2-java (0.9.1-8) ... Selecting previously unselected package libpj-java. Preparing to unpack .../64-libpj-java_0.0~20150107+dfsg-5_all.deb ... Unpacking libpj-java (0.0~20150107+dfsg-5) ... Selecting previously unselected package libprotobuf-java. Preparing to unpack .../65-libprotobuf-java_3.21.12-9_all.deb ... Unpacking libprotobuf-java (3.21.12-9) ... Selecting previously unselected package libservlet-api-java. Preparing to unpack .../66-libservlet-api-java_4.0.1-2_all.deb ... Unpacking libservlet-api-java (4.0.1-2) ... Selecting previously unselected package libreflections-java. Preparing to unpack .../67-libreflections-java_0.10.2+dfsg-2_all.deb ... Unpacking libreflections-java (0.10.2+dfsg-2) ... Selecting previously unselected package piuparts-depends-dummy. Preparing to unpack .../68-piuparts-depends-dummy.deb ... Unpacking piuparts-depends-dummy (0.invalid.0) ... Setting up liblcms2-2:amd64 (2.14-2+b1) ... Setting up libfastutil-java (8.5.14+dfsg-1) ... Setting up libslf4j-java (1.7.32-1) ... Setting up libjsr305-java (0.1~+svn49-11) ... Setting up libmbedcrypto7t64:amd64 (2.28.8-1) ... Setting up libicu4j-java (73.2-1) ... Setting up java-common (0.76) ... Setting up libcommons-cli-java (1.6.0-1) ... Setting up libcommons-exec-java (1.3-2) ... Setting up liblogback-java (1:1.2.11-5) ... Setting up libgoogle-gson-java (2.10.1-1) ... Setting up libmjson-java (1.4.0-3) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up liblog4j1.2-java (1.2.17-11) ... Setting up libjboss-logging-java (3.5.3-1) ... Setting up libsnappy1v5:amd64 (1.2.1-1) ... Setting up libcommons-collections3-java (3.2.2-3) ... Setting up libjavassist-java (1:3.27.0-1) ... Setting up librhino-java (1.7.14-2.1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3) ... Setting up libjaxen-java (1.1.6-4) ... Setting up libnspr4:amd64 (2:4.35-1.1+b1) ... Setting up libapache-pom-java (29-2) ... Setting up libxpp3-java (1.1.4c-3) ... Setting up libatinject-jsr330-api-java (1.0+ds1-5) ... Setting up libjbzip2-java (0.9.1-8) ... Setting up libpcsclite1:amd64 (2.3.0-1) ... Setting up libhamcrest-java (2.2-2) ... Setting up libcolt-free-java (1.2.0+dfsg-8) ... Setting up libcommons-math-java (2.2-8) ... Setting up libservlet-api-java (4.0.1-2) ... Setting up ncbi-vdb-data (3.0.2+dfsg-2) ... Setting up libcommons-math3-java (3.6.1-3) ... Setting up libpj-java (0.0~20150107+dfsg-5) ... Setting up openssl (3.3.2-1) ... Setting up libsnappy-jni (1.1.10.5-2) ... Setting up libdom4j-java (2.1.4-1) ... Setting up libxstream-java (1.4.20-1) ... Setting up libmbedx509-1t64:amd64 (2.28.8-1) ... Setting up libjboss-vfs-java (3.2.15.Final-3) ... Setting up libcommons-parent-java (56-1) ... Setting up libcommons-logging-java (1.3.0-1) ... Setting up libnss3:amd64 (2:3.103-1) ... Setting up libcommons-lang-java (2.6-10) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libmbedtls14t64:amd64 (2.28.8-1) ... Setting up libcommons-beanutils-java (1.9.4-2) ... Setting up libsnappy-java (1.1.10.5-2) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-configuration-java (1.10-6) ... Setting up libreflections-java (0.10.2+dfsg-2) ... Setting up openjdk-21-jre-headless:amd64 (21.0.4+7-3) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libcommons-compress-java (1.25.0-1) ... Setting up libcommons-io-java (2.16.1-1) ... Setting up libncbi-vdb3:amd64 (3.0.2+dfsg-2+b1) ... Setting up libncbi-ngs3:amd64 (3.0.3+dfsg-9) ... Setting up libngs-jni:amd64 (3.0.3+dfsg-9) ... Setting up libngs-java:amd64 (3.0.3+dfsg-9) ... Setting up libhtsjdk-java (4.1.0+dfsg-2) ... Setting up liberror-prone-java (2.18.0-1) ... Setting up libguava-java (32.0.1-1) ... Setting up libprotobuf-java (3.21.12-9) ... Processing triggers for libc-bin (2.40-2) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up ant (1.10.14-1) ... Setting up default-jre-headless (2:1.21-76) ... Setting up libjsap-java (2.1-5) ... Setting up libdsiutils-java (2.7.3+dfsg-1) ... Setting up libicb-utils-java (2.0.1+git20161002.afee1d9-5) ... Setting up piuparts-depends-dummy (0.invalid.0) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20240118) ... done. 0m19.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 0m19.4s INFO: Installation of ['./tmp/piuparts-depends-dummy.deb'] ok 0m19.4s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmpd172eqji/./tmp/piuparts-depends-dummy.deb 0m19.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m19.4s DUMP: piuparts-depends-dummy install ok installed 0m19.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m19.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m19.4s DUMP: (Reading database ... 7459 files and directories currently installed.) Removing piuparts-depends-dummy (0.invalid.0) ... 0m19.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m19.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'clean'] 0m19.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'clean'] 0m19.5s DEBUG: Recording chroot state 0m19.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m20.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m20.3s DEBUG: No broken symlinks as far as we can find. 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy'] 0m20.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m20.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy'] 0m20.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy', 'libgoby-io-java'] 0m20.8s DUMP: libgoby-io-java: Installed: (none) Candidate: 3.3.1+dfsg2-11 Version table: 3.3.1+dfsg2-11 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m20.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy', 'libgoby-io-java'] 0m20.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-y', 'install', 'libgoby-io-java=3.3.1+dfsg2-11'] 0m21.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libgoby-io-java 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 977 kB of archives. After this operation, 1086 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libgoby-io-java all 3.3.1+dfsg2-11 [977 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 977 kB in 1s (1433 kB/s) Selecting previously unselected package libgoby-io-java. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7459 files and directories currently installed.) Preparing to unpack .../libgoby-io-java_3.3.1+dfsg2-11_all.deb ... Unpacking libgoby-io-java (3.3.1+dfsg2-11) ... Setting up libgoby-io-java (3.3.1+dfsg2-11) ... 0m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-y', 'install', 'libgoby-io-java=3.3.1+dfsg2-11'] 0m21.9s INFO: Running scripts post_install 0m21.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_install_exceptions'] 0m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_install_exceptions'] 0m21.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'remove', 'libgoby-io-java'] 0m22.3s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: ant ca-certificates-java default-jre-headless java-common libapache-pom-java libatinject-jsr330-api-java libcolt-free-java libcommons-beanutils-java libcommons-cli-java libcommons-collections3-java libcommons-compress-java libcommons-configuration-java libcommons-exec-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-logging-java libcommons-math-java libcommons-math3-java libcommons-parent-java libdom4j-java libdsiutils-java liberror-prone-java libfastutil-java libgoogle-gson-java libguava-java libhamcrest-java libhtsjdk-java libicb-utils-java libicu4j-java libjavassist-java libjaxen-java libjboss-logging-java libjboss-vfs-java libjbzip2-java libjpeg62-turbo libjsap-java libjsr305-java liblcms2-2 liblog4j1.2-java liblogback-java libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmjson-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni libnspr4 libnss3 libpcsclite1 libpj-java libprotobuf-java libreflections-java librhino-java libservlet-api-java libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 libsqlite3-0 libxpp3-java libxstream-java ncbi-vdb-data openjdk-21-jre-headless Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libgoby-io-java 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. After this operation, 1086 kB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7479 files and directories currently installed.) Removing libgoby-io-java (3.3.1+dfsg2-11) ... 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'remove', 'libgoby-io-java'] 0m22.3s INFO: Reinstalling after remove 0m22.3s INFO: Running scripts pre_install 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_database-server'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_database-server'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_exceptions'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_exceptions'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_extras'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_extras'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy'] 0m22.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy', 'libgoby-io-java'] 0m22.4s DUMP: libgoby-io-java: Installed: (none) Candidate: 3.3.1+dfsg2-11 Version table: 3.3.1+dfsg2-11 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m22.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy', 'libgoby-io-java'] 0m22.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-y', 'install', 'libgoby-io-java=3.3.1+dfsg2-11'] 0m22.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libgoby-io-java debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/977 kB of archives. After this operation, 1086 kB of additional disk space will be used. Selecting previously unselected package libgoby-io-java. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7459 files and directories currently installed.) Preparing to unpack .../libgoby-io-java_3.3.1+dfsg2-11_all.deb ... Unpacking libgoby-io-java (3.3.1+dfsg2-11) ... Setting up libgoby-io-java (3.3.1+dfsg2-11) ... 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-y', 'install', 'libgoby-io-java=3.3.1+dfsg2-11'] 0m22.8s INFO: Running scripts post_install 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_install_exceptions'] 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_install_exceptions'] 0m22.8s INFO: Running scripts pre_install 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_database-server'] 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_database-server'] 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_exceptions'] 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_exceptions'] 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_extras'] 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_extras'] 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture'] 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture'] 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy'] 0m22.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m22.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy'] 0m22.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy', 'libgoby-io-java'] 0m22.9s DUMP: libgoby-io-java: Installed: 3.3.1+dfsg2-11 Candidate: 3.3.1+dfsg2-11 Version table: *** 3.3.1+dfsg2-11 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m22.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-cache', 'policy', 'libgoby-io-java'] 0m22.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-y', 'install', '--reinstall', 'libgoby-io-java=3.3.1+dfsg2-11'] 0m23.3s DUMP: Reading package lists... Building dependency tree... Reading state information... debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 0 newly installed, 1 reinstalled, 0 to remove and 0 not upgraded. Need to get 0 B/977 kB of archives. After this operation, 0 B of additional disk space will be used. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7479 files and directories currently installed.) Preparing to unpack .../libgoby-io-java_3.3.1+dfsg2-11_all.deb ... Unpacking libgoby-io-java (3.3.1+dfsg2-11) over (3.3.1+dfsg2-11) ... Setting up libgoby-io-java (3.3.1+dfsg2-11) ... 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', '-y', 'install', '--reinstall', 'libgoby-io-java=3.3.1+dfsg2-11'] 0m23.3s INFO: Running scripts post_install 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_install_exceptions'] 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_install_exceptions'] 0m23.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m23.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m23.9s DEBUG: No broken symlinks as far as we can find. 0m24.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpd172eqji', '-ac', '--ignore-obsolete'] 0m24.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpd172eqji', '-ac', '--ignore-obsolete'] 0m24.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m24.9s DUMP: 0.15.6 0m24.9s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m24.9s INFO: Running adequate version 0.15.6 now. 0m24.9s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'libgoby-io-java'] 0m25.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'libgoby-io-java'] 0m25.0s INFO: Running scripts pre_remove 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m25.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m25.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_exceptions'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_exceptions'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_preseed_cleanup'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/pre_remove_preseed_cleanup'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m25.5s DUMP: install ok installed ant ant 1.10.14-1 install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1 install ok installed bsdutils bsdutils 1:2.40.2-7 install ok installed ca-certificates ca-certificates 20240203 install ok installed ca-certificates-java ca-certificates-java 20240118 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed dbconfig-common dbconfig-common 2.0.24 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed default-jre-headless default-jre-headless 2:1.21-76 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-4 install ok installed gpgv gpgv 2.2.43-8 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed java-common java-common 0.76 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapache-pom-java libapache-pom-java 29-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libatinject-jsr330-api-java libatinject-jsr330-api-java 1.0+ds1-5 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:4.0.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.0.1-1 install ok installed libblkid1:amd64 libblkid1 2.40.2-7 install ok installed libbsd0:amd64 libbsd0 0.12.2-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-2 install ok installed libc6:amd64 libc6 2.40-2 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcolt-free-java libcolt-free-java 1.2.0+dfsg-8 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcommons-beanutils-java libcommons-beanutils-java 1.9.4-2 install ok installed libcommons-cli-java libcommons-cli-java 1.6.0-1 install ok installed libcommons-collections3-java libcommons-collections3-java 3.2.2-3 install ok installed libcommons-compress-java libcommons-compress-java 1.25.0-1 install ok installed libcommons-configuration-java libcommons-configuration-java 1.10-6 install ok installed libcommons-exec-java libcommons-exec-java 1.3-2 install ok installed libcommons-io-java libcommons-io-java 2.16.1-1 install ok installed libcommons-jexl2-java libcommons-jexl2-java 2.1.1-6 install ok installed libcommons-lang-java libcommons-lang-java 2.6-10 install ok installed libcommons-logging-java libcommons-logging-java 1.3.0-1 install ok installed libcommons-math-java libcommons-math-java 2.2-8 install ok installed libcommons-math3-java libcommons-math3-java 3.6.1-3 install ok installed libcommons-parent-java libcommons-parent-java 56-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libdom4j-java libdom4j-java 2.1.4-1 install ok installed libdsiutils-java libdsiutils-java 2.7.3+dfsg-1 install ok installed liberror-prone-java liberror-prone-java 2.18.0-1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libfastutil-java libfastutil-java 8.5.14+dfsg-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-4 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgoby-io-java libgoby-io-java 3.3.1+dfsg2-11 install ok installed libgoogle-gson-java libgoogle-gson-java 2.10.1-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-3 install ok installed libguava-java libguava-java 32.0.1-1 install ok installed libhamcrest-java libhamcrest-java 2.2-2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libhtsjdk-java libhtsjdk-java 4.1.0+dfsg-2 install ok installed libicb-utils-java libicb-utils-java 2.0.1+git20161002.afee1d9-5 install ok installed libicu4j-java libicu4j-java 73.2-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libjavassist-java libjavassist-java 1:3.27.0-1 install ok installed libjaxen-java libjaxen-java 1.1.6-4 install ok installed libjboss-logging-java libjboss-logging-java 3.5.3-1 install ok installed libjboss-vfs-java libjboss-vfs-java 3.2.15.Final-3 install ok installed libjbzip2-java libjbzip2-java 0.9.1-8 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-3 install ok installed libjsap-java libjsap-java 2.1-5 install ok installed libjsr305-java libjsr305-java 0.1~+svn49-11 install ok installed liblcms2-2:amd64 liblcms2-2 2.14-2+b1 install ok installed liblog4j1.2-java liblog4j1.2-java 1.2.17-11 install ok installed liblogback-java liblogback-java 1:1.2.11-5 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmbedcrypto7t64:amd64 libmbedcrypto7t64 2.28.8-1 install ok installed libmbedtls14t64:amd64 libmbedtls14t64 2.28.8-1 install ok installed libmbedx509-1t64:amd64 libmbedx509-1t64 2.28.8-1 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmjson-java libmjson-java 1.4.0-3 install ok installed libmount1:amd64 libmount1 2.40.2-7 install ok installed libncbi-ngs3:amd64 libncbi-ngs3 3.0.3+dfsg-9 install ok installed libncbi-vdb3:amd64 libncbi-vdb3 3.0.2+dfsg-2+b1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libngs-java:amd64 libngs-java 3.0.3+dfsg-9 install ok installed libngs-jni:amd64 libngs-jni 3.0.3+dfsg-9 install ok installed libnspr4:amd64 libnspr4 2:4.35-1.1+b1 install ok installed libnss3:amd64 libnss3 2:3.103-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libpcsclite1:amd64 libpcsclite1 2.3.0-1 install ok installed libpj-java libpj-java 0.0~20150107+dfsg-5 install ok installed libprotobuf-java libprotobuf-java 3.21.12-9 install ok installed libreflections-java libreflections-java 0.10.2+dfsg-2 install ok installed librhino-java librhino-java 1.7.14-2.1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libservlet-api-java libservlet-api-java 4.0.1-2 install ok installed libslf4j-java libslf4j-java 1.7.32-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-7 install ok installed libsnappy-java libsnappy-java 1.1.10.5-2 install ok installed libsnappy-jni libsnappy-jni 1.1.10.5-2 install ok installed libsnappy1v5:amd64 libsnappy1v5 1.2.1-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-1 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-4 install ok installed libsystemd0:amd64 libsystemd0 256.5-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.5-2 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-7 install ok installed libxpp3-java libxpp3-java 1.1.4c-3 install ok installed libxstream-java libxstream-java 1.4.20-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-7 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240819-3 install ok installed mount mount 2.40.2-7 install ok installed ncbi-vdb-data ncbi-vdb-data 3.0.2+dfsg-2 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openjdk-21-jre-headless:amd64 openjdk-21-jre-headless 21.0.4+7-3 install ok installed openssl openssl 3.3.2-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.24 install ok installed sysvinit-utils sysvinit-utils 3.10-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed ucf ucf 3.0043+nmu1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-7 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'remove', 'ant', 'ca-certificates', 'ca-certificates-java', 'default-jre-headless', 'java-common', 'libapache-pom-java', 'libatinject-jsr330-api-java', 'libcolt-free-java', 'libcommons-beanutils-java', 'libcommons-cli-java', 'libcommons-collections3-java', 'libcommons-compress-java', 'libcommons-configuration-java', 'libcommons-exec-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-logging-java', 'libcommons-math-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libdom4j-java', 'libdsiutils-java', 'liberror-prone-java', 'libfastutil-java', 'libgoogle-gson-java', 'libguava-java', 'libhamcrest-java', 'libhtsjdk-java', 'libicb-utils-java', 'libicu4j-java', 'libjavassist-java', 'libjaxen-java', 'libjboss-logging-java', 'libjboss-vfs-java', 'libjbzip2-java', 'libjpeg62-turbo:amd64', 'libjsap-java', 'libjsr305-java', 'liblcms2-2:amd64', 'liblog4j1.2-java', 'liblogback-java', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmjson-java', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libpcsclite1:amd64', 'libpj-java', 'libprotobuf-java', 'libreflections-java', 'librhino-java', 'libservlet-api-java', 'libslf4j-java', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libxpp3-java', 'libxstream-java', 'ncbi-vdb-data', 'openjdk-21-jre-headless:amd64', 'openssl', 'libgoby-io-java'] 0m26.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: ant ca-certificates ca-certificates-java default-jre-headless java-common libapache-pom-java libatinject-jsr330-api-java libcolt-free-java libcommons-beanutils-java libcommons-cli-java libcommons-collections3-java libcommons-compress-java libcommons-configuration-java libcommons-exec-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-logging-java libcommons-math-java libcommons-math3-java libcommons-parent-java libdom4j-java libdsiutils-java liberror-prone-java libfastutil-java libgoby-io-java libgoogle-gson-java libguava-java libhamcrest-java libhtsjdk-java libicb-utils-java libicu4j-java libjavassist-java libjaxen-java libjboss-logging-java libjboss-vfs-java libjbzip2-java libjpeg62-turbo libjsap-java libjsr305-java liblcms2-2 liblog4j1.2-java liblogback-java libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmjson-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni libnspr4 libnss3 libpcsclite1 libpj-java libprotobuf-java libreflections-java librhino-java libservlet-api-java libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 libsqlite3-0 libxpp3-java libxstream-java ncbi-vdb-data openjdk-21-jre-headless openssl 0 upgraded, 0 newly installed, 69 to remove and 0 not upgraded. After this operation, 291 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7479 files and directories currently installed.) Removing libgoby-io-java (3.3.1+dfsg2-11) ... Removing libicb-utils-java (2.0.1+git20161002.afee1d9-5) ... Removing libdsiutils-java (2.7.3+dfsg-1) ... Removing libjsap-java (2.1-5) ... Removing ant (1.10.14-1) ... Removing default-jre-headless (2:1.21-76) ... Removing openjdk-21-jre-headless:amd64 (21.0.4+7-3) ... Removing ca-certificates-java (20240118) ... Removing ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing java-common (0.76) ... Removing libhtsjdk-java (4.1.0+dfsg-2) ... Removing libcommons-jexl2-java (2.1.1-6) ... Removing libcommons-configuration-java (1.10-6) ... Removing libcommons-lang-java (2.6-10) ... Removing libprotobuf-java (3.21.12-9) ... Removing libcolt-free-java (1.2.0+dfsg-8) ... Removing libcommons-beanutils-java (1.9.4-2) ... Removing libcommons-cli-java (1.6.0-1) ... Removing libcommons-collections3-java (3.2.2-3) ... Removing libcommons-compress-java (1.25.0-1) ... Removing libcommons-exec-java (1.3-2) ... Removing libcommons-io-java (2.16.1-1) ... Removing libcommons-math-java (2.2-8) ... Removing libcommons-math3-java (3.6.1-3) ... Removing libreflections-java (0.10.2+dfsg-2) ... Removing libdom4j-java (2.1.4-1) ... Removing libfastutil-java (8.5.14+dfsg-1) ... Removing libgoogle-gson-java (2.10.1-1) ... Removing libhamcrest-java (2.2-2) ... Removing libicu4j-java (73.2-1) ... Removing libjavassist-java (1:3.27.0-1) ... Removing libjaxen-java (1.1.6-4) ... Removing libjboss-vfs-java (3.2.15.Final-3) ... Removing libjboss-logging-java (3.5.3-1) ... Removing libjbzip2-java (0.9.1-8) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-3) ... Removing liblcms2-2:amd64 (2.14-2+b1) ... Removing liblog4j1.2-java (1.2.17-11) ... Removing liblogback-java (1:1.2.11-5) ... Removing libngs-java:amd64 (3.0.3+dfsg-9) ... Removing libngs-jni:amd64 (3.0.3+dfsg-9) ... Removing libncbi-ngs3:amd64 (3.0.3+dfsg-9) ... Removing libncbi-vdb3:amd64 (3.0.2+dfsg-2+b1) ... Removing libmbedtls14t64:amd64 (2.28.8-1) ... Removing libmbedx509-1t64:amd64 (2.28.8-1) ... Removing libmbedcrypto7t64:amd64 (2.28.8-1) ... Removing libmjson-java (1.4.0-3) ... Removing libnss3:amd64 (2:3.103-1) ... Removing libnspr4:amd64 (2:4.35-1.1+b1) ... Removing libpcsclite1:amd64 (2.3.0-1) ... Removing libpj-java (0.0~20150107+dfsg-5) ... Removing librhino-java (1.7.14-2.1) ... Removing libservlet-api-java (4.0.1-2) ... Removing libslf4j-java (1.7.32-1) ... Removing libsnappy-java (1.1.10.5-2) ... Removing libsnappy-jni (1.1.10.5-2) ... Removing libsnappy1v5:amd64 (1.2.1-1) ... Removing libsqlite3-0:amd64 (3.46.1-1) ... Removing libxstream-java (1.4.20-1) ... Removing libxpp3-java (1.1.4c-3) ... Removing ncbi-vdb-data (3.0.2+dfsg-2) ... Removing openssl (3.3.2-1) ... Removing libcommons-logging-java (1.3.0-1) ... Removing libcommons-parent-java (56-1) ... Removing libapache-pom-java (29-2) ... Removing liberror-prone-java (2.18.0-1) ... Removing libguava-java (32.0.1-1) ... Removing libatinject-jsr330-api-java (1.0+ds1-5) ... Removing libjsr305-java (0.1~+svn49-11) ... Processing triggers for libc-bin (2.40-2) ... 0m26.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'remove', 'ant', 'ca-certificates', 'ca-certificates-java', 'default-jre-headless', 'java-common', 'libapache-pom-java', 'libatinject-jsr330-api-java', 'libcolt-free-java', 'libcommons-beanutils-java', 'libcommons-cli-java', 'libcommons-collections3-java', 'libcommons-compress-java', 'libcommons-configuration-java', 'libcommons-exec-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-logging-java', 'libcommons-math-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libdom4j-java', 'libdsiutils-java', 'liberror-prone-java', 'libfastutil-java', 'libgoogle-gson-java', 'libguava-java', 'libhamcrest-java', 'libhtsjdk-java', 'libicb-utils-java', 'libicu4j-java', 'libjavassist-java', 'libjaxen-java', 'libjboss-logging-java', 'libjboss-vfs-java', 'libjbzip2-java', 'libjpeg62-turbo:amd64', 'libjsap-java', 'libjsr305-java', 'liblcms2-2:amd64', 'liblog4j1.2-java', 'liblogback-java', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmjson-java', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libpcsclite1:amd64', 'libpj-java', 'libprotobuf-java', 'libreflections-java', 'librhino-java', 'libservlet-api-java', 'libslf4j-java', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libxpp3-java', 'libxstream-java', 'ncbi-vdb-data', 'openjdk-21-jre-headless:amd64', 'openssl', 'libgoby-io-java'] 0m26.2s INFO: Running scripts post_remove 0m26.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_remove_cleanup'] 0m26.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_remove_cleanup'] 0m26.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_remove_exceptions'] 0m26.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_remove_exceptions'] 0m26.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--purge', 'ant', 'ca-certificates', 'ca-certificates-java', 'default-jre-headless', 'java-common', 'libapache-pom-java', 'libatinject-jsr330-api-java', 'libcolt-free-java', 'libcommons-beanutils-java', 'libcommons-cli-java', 'libcommons-collections3-java', 'libcommons-compress-java', 'libcommons-configuration-java', 'libcommons-exec-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-logging-java', 'libcommons-math-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libdom4j-java', 'libdsiutils-java', 'liberror-prone-java', 'libfastutil-java', 'libgoogle-gson-java', 'libguava-java', 'libhamcrest-java', 'libhtsjdk-java', 'libicb-utils-java', 'libicu4j-java', 'libjavassist-java', 'libjaxen-java', 'libjboss-logging-java', 'libjboss-vfs-java', 'libjbzip2-java', 'libjpeg62-turbo:amd64', 'libjsap-java', 'libjsr305-java', 'liblcms2-2:amd64', 'liblog4j1.2-java', 'liblogback-java', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmjson-java', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libpcsclite1:amd64', 'libpj-java', 'libprotobuf-java', 'libreflections-java', 'librhino-java', 'libservlet-api-java', 'libslf4j-java', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libxpp3-java', 'libxstream-java', 'ncbi-vdb-data', 'openjdk-21-jre-headless:amd64', 'openssl'] 0m26.2s DUMP: dpkg: warning: ignoring request to remove ant which isn't installed (Reading database ... 5521 files and directories currently installed.) Purging configuration files for ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for ca-certificates-java (20240118) ... dpkg: warning: ignoring request to remove default-jre-headless which isn't installed Purging configuration files for java-common (0.76) ... dpkg: warning: ignoring request to remove libapache-pom-java which isn't installed dpkg: warning: ignoring request to remove libatinject-jsr330-api-java which isn't installed dpkg: warning: ignoring request to remove libcolt-free-java which isn't installed dpkg: warning: ignoring request to remove libcommons-beanutils-java which isn't installed dpkg: warning: ignoring request to remove libcommons-cli-java which isn't installed dpkg: warning: ignoring request to remove libcommons-collections3-java which isn't installed dpkg: warning: ignoring request to remove libcommons-compress-java which isn't installed dpkg: warning: ignoring request to remove libcommons-configuration-java which isn't installed dpkg: warning: ignoring request to remove libcommons-exec-java which isn't installed dpkg: warning: ignoring request to remove libcommons-io-java which isn't installed dpkg: warning: ignoring request to remove libcommons-jexl2-java which isn't installed dpkg: warning: ignoring request to remove libcommons-lang-java which isn't installed dpkg: warning: ignoring request to remove libcommons-logging-java which isn't installed dpkg: warning: ignoring request to remove libcommons-math-java which isn't installed dpkg: warning: ignoring request to remove libcommons-math3-java which isn't installed dpkg: warning: ignoring request to remove libcommons-parent-java which isn't installed dpkg: warning: ignoring request to remove libdom4j-java which isn't installed dpkg: warning: ignoring request to remove libdsiutils-java which isn't installed dpkg: warning: ignoring request to remove liberror-prone-java which isn't installed dpkg: warning: ignoring request to remove libfastutil-java which isn't installed dpkg: warning: ignoring request to remove libgoogle-gson-java which isn't installed dpkg: warning: ignoring request to remove libguava-java which isn't installed dpkg: warning: ignoring request to remove libhamcrest-java which isn't installed dpkg: warning: ignoring request to remove libhtsjdk-java which isn't installed dpkg: warning: ignoring request to remove libicb-utils-java which isn't installed dpkg: warning: ignoring request to remove libicu4j-java which isn't installed dpkg: warning: ignoring request to remove libjavassist-java which isn't installed dpkg: warning: ignoring request to remove libjaxen-java which isn't installed dpkg: warning: ignoring request to remove libjboss-logging-java which isn't installed dpkg: warning: ignoring request to remove libjboss-vfs-java which isn't installed dpkg: warning: ignoring request to remove libjbzip2-java which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjsap-java which isn't installed dpkg: warning: ignoring request to remove libjsr305-java which isn't installed dpkg: warning: ignoring request to remove liblcms2-2 which isn't installed dpkg: warning: ignoring request to remove liblog4j1.2-java which isn't installed dpkg: warning: ignoring request to remove liblogback-java which isn't installed dpkg: warning: ignoring request to remove libmbedcrypto7t64 which isn't installed dpkg: warning: ignoring request to remove libmbedtls14t64 which isn't installed dpkg: warning: ignoring request to remove libmbedx509-1t64 which isn't installed dpkg: warning: ignoring request to remove libmjson-java which isn't installed dpkg: warning: ignoring request to remove libncbi-ngs3 which isn't installed dpkg: warning: ignoring request to remove libncbi-vdb3 which isn't installed dpkg: warning: ignoring request to remove libngs-java which isn't installed dpkg: warning: ignoring request to remove libngs-jni which isn't installed dpkg: warning: ignoring request to remove libnspr4 which isn't installed dpkg: warning: ignoring request to remove libnss3 which isn't installed dpkg: warning: ignoring request to remove libpcsclite1 which isn't installed dpkg: warning: ignoring request to remove libpj-java which isn't installed dpkg: warning: ignoring request to remove libprotobuf-java which isn't installed dpkg: warning: ignoring request to remove libreflections-java which isn't installed dpkg: warning: ignoring request to remove librhino-java which isn't installed dpkg: warning: ignoring request to remove libservlet-api-java which isn't installed dpkg: warning: ignoring request to remove libslf4j-java which isn't installed dpkg: warning: ignoring request to remove libsnappy-java which isn't installed dpkg: warning: ignoring request to remove libsnappy-jni which isn't installed dpkg: warning: ignoring request to remove libsnappy1v5 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libxpp3-java which isn't installed dpkg: warning: ignoring request to remove libxstream-java which isn't installed dpkg: warning: ignoring request to remove ncbi-vdb-data which isn't installed Purging configuration files for openjdk-21-jre-headless:amd64 (21.0.4+7-3) ... Purging configuration files for openssl (3.3.2-1) ... 0m26.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--purge', 'ant', 'ca-certificates', 'ca-certificates-java', 'default-jre-headless', 'java-common', 'libapache-pom-java', 'libatinject-jsr330-api-java', 'libcolt-free-java', 'libcommons-beanutils-java', 'libcommons-cli-java', 'libcommons-collections3-java', 'libcommons-compress-java', 'libcommons-configuration-java', 'libcommons-exec-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-logging-java', 'libcommons-math-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libdom4j-java', 'libdsiutils-java', 'liberror-prone-java', 'libfastutil-java', 'libgoogle-gson-java', 'libguava-java', 'libhamcrest-java', 'libhtsjdk-java', 'libicb-utils-java', 'libicu4j-java', 'libjavassist-java', 'libjaxen-java', 'libjboss-logging-java', 'libjboss-vfs-java', 'libjbzip2-java', 'libjpeg62-turbo:amd64', 'libjsap-java', 'libjsr305-java', 'liblcms2-2:amd64', 'liblog4j1.2-java', 'liblogback-java', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmjson-java', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libpcsclite1:amd64', 'libpj-java', 'libprotobuf-java', 'libreflections-java', 'librhino-java', 'libservlet-api-java', 'libslf4j-java', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libxpp3-java', 'libxstream-java', 'ncbi-vdb-data', 'openjdk-21-jre-headless:amd64', 'openssl'] 0m26.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--purge', 'libgoby-io-java'] 0m26.2s DUMP: dpkg: warning: ignoring request to remove libgoby-io-java which isn't installed 0m26.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--purge', 'libgoby-io-java'] 0m26.2s INFO: Running scripts post_purge 0m26.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_purge_exceptions'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_purge_exceptions'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_purge_manual_cleanup'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_purge_manual_cleanup'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--purge', '--pending'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--purge', '--pending'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--remove', '--pending'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg', '--remove', '--pending'] 0m26.3s INFO: Running scripts post_test 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_test_exceptions'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'tmp/scripts/post_test_exceptions'] 0m26.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m26.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m26.7s DEBUG: No broken symlinks as far as we can find. 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-divert', '--list'] 0m26.7s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'dpkg-divert', '--list'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'clean'] 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpd172eqji', 'apt-get', 'clean'] 0m26.7s DEBUG: Recording chroot state 0m27.0s INFO: PASS: Installation and purging test. 0m27.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/shm'] 0m27.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/shm'] 0m27.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/console'] 0m27.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/console'] 0m27.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/ptmx'] 0m27.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/ptmx'] 0m27.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/pts'] 0m27.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/dev/pts'] 0m27.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/proc'] 0m27.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpd172eqji/proc'] 0m27.3s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m27.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpd172eqji'] 0m27.4s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpd172eqji 0m27.4s INFO: PASS: All tests. 0m27.4s INFO: piuparts run ends. ret=0 End: 2024-09-05 04:37:48 GMT