Start: 2026-02-06 04:22:10 GMT Package: pycoqc Version: 2.5.2+dfsg-5 Installed-Size: 196 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3-h5py, python3-jinja2, python3-numpy, python3-pandas, python3-plotly (>= 4.1.0), python3-pysam, python3-scipy, python3-tqdm, python3:any Description: computes metrics and generates Interactive QC plots Homepage: https://github.com/a-slide/pycoQC Description-md5: 311c31394d7f1c34ec5bf3baa30e71f3 Section: science Priority: optional Filename: pool/main/p/pycoqc/pycoqc_2.5.2+dfsg-5_all.deb Size: 36748 MD5sum: 7978b2c648651657167a089497eafcd9 SHA256: b464604556c4de43629019327cfcb8248ef7e81705dd5d3d77d34a1b953bb62b Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt pycoqc=2.5.2+dfsg-5 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202508211944~1.6.0-10-gffba2cce starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt pycoqc=2.5.2+dfsg-5 0m0.0s INFO: Running on: Linux piu-slave-conova-01 6.1.0-42-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.159-1 (2025-12-30) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp9pnbi08t 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp9pnbi08t 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/pts'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/pts'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/ptmx'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/ptmx'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/console'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/console'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/shm'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/shm'] 0m0.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.3s DEBUG: Created policy-rc.d and chmodded it. 0m0.3s DEBUG: Created resolv.conf. 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp9pnbi08t/tmp/scripts/ 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts-leftovers to /srv/piuparts.debian.org/tmp/tmp9pnbi08t/tmp/scripts/ 0m0.3s INFO: Running scripts post_chroot_unpack 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'update'] 0m2.9s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [187 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.1 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7415 kB] Fetched 17.7 MB in 2s (9563 kB/s) Reading package lists... 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'update'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-yf', 'dist-upgrade'] 0m3.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: mawk 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 143 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 mawk amd64 1.3.4.20260129-1 [143 kB] Fetched 143 kB in 0s (4732 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4908 files and directories currently installed.) Preparing to unpack .../mawk_1.3.4.20260129-1_amd64.deb ... Unpacking mawk (1.3.4.20260129-1) over (1.3.4.20250131-2) ... Setting up mawk (1.3.4.20260129-1) ... 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-yf', 'dist-upgrade'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.3s DUMP: 9c09fbe8cc247f0943c57375d5cfd566 - 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.3s INFO: Running scripts post_setup 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_dummy_users'] 0m5.0s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_dummy_users'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_fake-essential'] 0m6.4s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Reading state information... init-system-helpers is already the newest version (1.69). Solving dependencies... The following additional packages will be installed: libncursesw6 libproc2-0 libtext-charwidth-perl libtext-wrapi18n-perl procps sensible-utils ucf Suggested packages: dbconfig-mysql | dbconfig-pgsql | dbconfig-sqlite3 | dbconfig-no-thanks Recommended packages: libgpm2 psmisc linux-sysctl-defaults The following NEW packages will be installed: dbconfig-common libncursesw6 libproc2-0 libtext-charwidth-perl libtext-wrapi18n-perl procps sensible-utils ucf 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. Need to get 1779 kB of archives. After this operation, 4989 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.6+20251231-1 [137 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libproc2-0 amd64 2:4.0.4-9+b1 [66.1 kB] Get:3 http://deb.debian.org/debian sid/main amd64 procps amd64 2:4.0.4-9+b1 [883 kB] Get:4 http://deb.debian.org/debian sid/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libtext-charwidth-perl amd64 0.04-11+b5 [9532 B] Get:6 http://deb.debian.org/debian sid/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:7 http://deb.debian.org/debian sid/main amd64 ucf all 3.0052 [43.3 kB] Get:8 http://deb.debian.org/debian sid/main amd64 dbconfig-common all 2.0.25 [604 kB] Preconfiguring packages ... Fetched 1779 kB in 0s (24.6 MB/s) Selecting previously unselected package libncursesw6:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4908 files and directories currently installed.) Preparing to unpack .../0-libncursesw6_6.6+20251231-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.6+20251231-1) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../1-libproc2-0_2%3a4.0.4-9+b1_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-9+b1) ... Selecting previously unselected package procps. Preparing to unpack .../2-procps_2%3a4.0.4-9+b1_amd64.deb ... Unpacking procps (2:4.0.4-9+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../3-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libtext-charwidth-perl:amd64. Preparing to unpack .../4-libtext-charwidth-perl_0.04-11+b5_amd64.deb ... Unpacking libtext-charwidth-perl:amd64 (0.04-11+b5) ... Selecting previously unselected package libtext-wrapi18n-perl. Preparing to unpack .../5-libtext-wrapi18n-perl_0.06-10_all.deb ... Unpacking libtext-wrapi18n-perl (0.06-10) ... Selecting previously unselected package ucf. Preparing to unpack .../6-ucf_3.0052_all.deb ... Moving old data out of the way Unpacking ucf (3.0052) ... Selecting previously unselected package dbconfig-common. Preparing to unpack .../7-dbconfig-common_2.0.25_all.deb ... Unpacking dbconfig-common (2.0.25) ... Setting up libtext-charwidth-perl:amd64 (0.04-11+b5) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up libproc2-0:amd64 (2:4.0.4-9+b1) ... Setting up libncursesw6:amd64 (6.6+20251231-1) ... Setting up sensible-utils (0.0.26) ... Setting up procps (2:4.0.4-9+b1) ... Setting up ucf (3.0052) ... Setting up dbconfig-common (2.0.25) ... Creating config file /etc/dbconfig-common/config with new version Processing triggers for libc-bin (2.42-11+b1) ... 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_fake-essential'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_forbid_home'] 0m6.4s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_forbid_home'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.4s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_minimize'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_minimize'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_zz_backports'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_setup_zz_backports'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'clean'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'clean'] 0m6.5s DEBUG: Recording chroot state 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.9s DUMP: install ok installed apt apt 3.1.15 install ok installed base-files base-files 14 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-1 install ok installed bsdutils bsdutils 1:2.41.3-3 install ok installed coreutils coreutils 9.7-3 install ok installed dash dash 0.5.12-12 install ok installed dbconfig-common dbconfig-common 2.0.25 install ok installed debconf debconf 1.5.91 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.23.2 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.5 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-15-base:amd64 gcc-15-base 15.2.0-12 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.13-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69 install ok installed libacl1:amd64 libacl1 2.3.2-2+b2 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.1.15 install ok installed libattr1:amd64 libattr1 1:2.5.2-3+b1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b1 install ok installed libblkid1:amd64 libblkid1 2.41.3-3 install ok installed libbsd0:amd64 libbsd0 0.12.2-2+b1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b1 install ok installed libc-bin libc-bin 2.42-11+b1 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.42-11+b1 install ok installed libc6:amd64 libc6 2.42-11+b1 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4+b2 install ok installed libcap2:amd64 libcap2 1:2.75-10+b5 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.1-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.282+b2 install ok installed libgcc-s1:amd64 libgcc-s1 15.2.0-12 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b1 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-6 install ok installed liblzma5:amd64 liblzma5 5.8.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2+b2 install ok installed libmount1:amd64 libmount1 2.41.3-3 install ok installed libncursesw6:amd64 libncursesw6 6.6+20251231-1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-5+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-5+b1 install ok installed libpam-runtime libpam-runtime 1.7.0-5 install ok installed libpam0g:amd64 libpam0g 1.7.0-5+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.46-1+b1 install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-9+b1 install ok installed libseccomp2:amd64 libseccomp2 2.6.0-2+b1 install ok installed libselinux1:amd64 libselinux1 3.9-4+b1 install ok installed libsemanage-common libsemanage-common 3.9-1 install ok installed libsemanage2:amd64 libsemanage2 3.9-1+b1 install ok installed libsepol2:amd64 libsepol2 3.9-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.41.3-3 install ok installed libssl3t64:amd64 libssl3t64 3.5.5-1 install ok installed libstdc++6:amd64 libstdc++6 15.2.0-12 install ok installed libsystemd0:amd64 libsystemd0 259-1 install ok installed libtext-charwidth-perl:amd64 libtext-charwidth-perl 0.04-11+b5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-10 install ok installed libtinfo6:amd64 libtinfo6 6.6+20251231-1 install ok installed libudev1:amd64 libudev1 259-1 install ok installed libuuid1:amd64 libuuid1 2.41.3-3 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-3+b1 install ok installed login login 1:4.16.0-2+really2.41.3-3 install ok installed login.defs login.defs 1:4.19.2-1 install ok installed mawk mawk 1.3.4.20260129-1 install ok installed mount mount 2.41.3-3 install ok installed ncurses-base ncurses-base 6.6+20251231-1 install ok installed ncurses-bin ncurses-bin 6.6+20251231-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.5.5-1 install ok installed passwd passwd 1:4.19.2-1 install ok installed perl-base perl-base 5.40.1-7 install ok installed procps procps 2:4.0.4-9+b1 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.26 install ok installed sqv sqv 1.3.0-5 install ok installed sysvinit-utils sysvinit-utils 3.15-6 install ok installed tar tar 1.35+dfsg-3.1 install ok installed tzdata tzdata 2025c-3 install ok installed ucf ucf 3.0052 install ok installed util-linux util-linux 2.41.3-3 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-2 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-divert', '--list'] 0m6.9s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-divert', '--list'] 0m6.9s INFO: Running scripts is_testable 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/is_testable_uninstallable'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/is_testable_uninstallable'] 0m6.9s INFO: apt-cache does not know about any of the requested packages 0m6.9s INFO: Running scripts pre_test 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_test_exceptions'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_test_exceptions'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_test_root_password'] 0m6.9s DUMP: New password: Retype new password: passwd: password updated successfully 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_test_root_password'] 0m6.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 0m7.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 0m7.5s DEBUG: No broken symlinks as far as we can find. 0m7.5s INFO: Running scripts pre_install 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_database-server'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_database-server'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_exceptions'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_exceptions'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_extras'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_extras'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'show', '--no-all-versions', 'pycoqc=2.5.2+dfsg-5'] 0m8.3s DUMP: Package: pycoqc Version: 2.5.2+dfsg-5 Installed-Size: 196 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3-h5py, python3-jinja2, python3-numpy, python3-pandas, python3-plotly (>= 4.1.0), python3-pysam, python3-scipy, python3-tqdm, python3:any Description-en: computes metrics and generates Interactive QC plots PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data . PycoQC relies on the sequencing_summary.txt file generated by Albacore and Guppy, but if needed it can also generates a summary file from basecalled fast5 files. The package supports 1D and 1D2 runs generated with Minion, Gridion and Promethion devices and basecalled with Albacore 1.2.1+ or Guppy 2.1.3+ Description-md5: 311c31394d7f1c34ec5bf3baa30e71f3 Homepage: https://github.com/a-slide/pycoQC Section: science Priority: optional Filename: pool/main/p/pycoqc/pycoqc_2.5.2+dfsg-5_all.deb Size: 36748 MD5sum: 7978b2c648651657167a089497eafcd9 SHA256: b464604556c4de43629019327cfcb8248ef7e81705dd5d3d77d34a1b953bb62b 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'show', '--no-all-versions', 'pycoqc=2.5.2+dfsg-5'] 0m8.3s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Depends: python3-h5py, python3-jinja2, python3-numpy, python3-pandas, python3-plotly (>= 4.1.0), python3-pysam, python3-scipy, python3-tqdm, python3:any Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed 0m8.3s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmp_bdq3zyc/piuparts-depends-dummy'] 0m8.3s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmp_bdq3zyc/piuparts-depends-dummy.deb'. 0m8.3s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmp_bdq3zyc/piuparts-depends-dummy'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m8.3s DUMP: 3.1.15 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m8.3s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmp_bdq3zyc/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmp9pnbi08t/tmp 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 0m36.3s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: ca-certificates libblas3 libbrotli1 libcom-err2 libcurl3t64-gnutls libcurl4t64 libdeflate0 libexpat1 libffi8 libgfortran5 libgnutls30t64 libgssapi-krb5-2 libhdf5-310 libhdf5-hl-310 libhts3t64 libhtscodecs2 libidn2-0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap2 liblzf1 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl0 libp11-kit0 libpsl5t64 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libsz2 libtasn1-6 libunistring5 media-types netbase openssl python3 python3-attr python3-certifi python3-chardet python3-charset-normalizer python3-dateutil python3-decorator python3-fastjsonschema python3-h5py python3-h5py-serial python3-idna python3-jinja2 python3-jsonschema python3-jsonschema-specifications python3-jupyter-core python3-markupsafe python3-minimal python3-nbformat python3-numpy python3-numpy-dev python3-pandas python3-pandas-lib python3-platformdirs python3-plotly python3-pysam python3-pytz python3-referencing python3-requests python3-rpds-py python3-scipy python3-tenacity python3-tqdm python3-traitlets python3-urllib3 python3.13 python3.13-minimal readline-common Suggested packages: gnutls-bin krb5-doc krb5-user python3-doc python3-tk python3-venv python-attr-doc python-charset-normalizer-doc python-fastjsonschema-doc python-h5py-doc python-jinja2-doc python-jsonschema-doc python-jupyter-core-doc python3-pip gcc gfortran python-numpy-doc python3-dev python3-pytest python-pandas-doc python3-statsmodels python3-matplotlib ipython3 python3-ipykernel python3-cryptography python3-openssl python3-socks python-requests-doc python-scipy-doc python-tenacity-doc python-traitlets-doc python3-backports.zstd | python3-supported-min python3-brotli python3.13-venv python3.13-doc binutils binfmt-support readline-doc Recommended packages: krb5-locales libldap-common publicsuffix libsasl2-modules python3-babel python3-fqdn python3-isoduration python3-json-pointer python3-rfc3339-validator python3-rfc3986-validator python3-rfc3987 python3-uritemplate python3-webcolors python3-matplotlib python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-bs4 python3-html5lib python3-lxml python3-tables python3-numba g++ | c++-compiler python3-pil python3-pooch python3-yaml The following NEW packages will be installed: ca-certificates libblas3 libbrotli1 libcom-err2 libcurl3t64-gnutls libcurl4t64 libdeflate0 libexpat1 libffi8 libgfortran5 libgnutls30t64 libgssapi-krb5-2 libhdf5-310 libhdf5-hl-310 libhts3t64 libhtscodecs2 libidn2-0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap2 liblzf1 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl0 libp11-kit0 libpsl5t64 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libsz2 libtasn1-6 libunistring5 media-types netbase openssl piuparts-depends-dummy python3 python3-attr python3-certifi python3-chardet python3-charset-normalizer python3-dateutil python3-decorator python3-fastjsonschema python3-h5py python3-h5py-serial python3-idna python3-jinja2 python3-jsonschema python3-jsonschema-specifications python3-jupyter-core python3-markupsafe python3-minimal python3-nbformat python3-numpy python3-numpy-dev python3-pandas python3-pandas-lib python3-platformdirs python3-plotly python3-pysam python3-pytz python3-referencing python3-requests python3-rpds-py python3-scipy python3-tenacity python3-tqdm python3-traitlets python3-urllib3 python3.13 python3.13-minimal readline-common 0 upgraded, 85 newly installed, 0 to remove and 0 not upgraded. Need to get 66.3 MB/66.3 MB of archives. After this operation, 393 MB of additional disk space will be used. Get:1 /tmp/piuparts-depends-dummy.deb piuparts-depends-dummy all 0.invalid.0 [690 B] Get:2 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.7.4-1 [116 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libpython3.13-minimal amd64 3.13.12-1 [866 kB] Get:4 http://deb.debian.org/debian sid/main amd64 python3.13-minimal amd64 3.13.12-1 [2267 kB] Get:5 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.13.9-3 [27.6 kB] Get:6 http://deb.debian.org/debian sid/main amd64 media-types all 14.0.0 [30.8 kB] Get:7 http://deb.debian.org/debian sid/main amd64 netbase all 6.5 [12.4 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libffi8 amd64 3.5.2-3+b1 [26.4 kB] Get:9 http://deb.debian.org/debian sid/main amd64 readline-common all 8.3-3 [74.8 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libreadline8t64 amd64 8.3-3+b1 [181 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.46.1-9 [920 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libpython3.13-stdlib amd64 3.13.12-1 [1974 kB] Get:13 http://deb.debian.org/debian sid/main amd64 python3.13 amd64 3.13.12-1 [776 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.13.9-3 [10.5 kB] Get:15 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.13.9-3 [27.6 kB] Get:16 http://deb.debian.org/debian sid/main amd64 python3-numpy-dev amd64 1:2.3.5+ds-3 [138 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.12.1-7+b1 [209 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 15.2.0-12 [862 kB] Get:19 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.12.1-7+b1 [2550 kB] Get:20 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:2.3.5+ds-3 [7487 kB] Get:21 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.5.5-1 [1500 kB] Get:22 http://deb.debian.org/debian sid/main amd64 ca-certificates all 20250419 [162 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.2.0-2 [319 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libcom-err2 amd64 1.47.2-3+b8 [25.1 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libnghttp3-9 amd64 1.12.0-1 [68.4 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libngtcp2-16 amd64 1.16.0-1 [136 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libunistring5 amd64 1.3-2+b1 [466 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libidn2-0 amd64 2.3.8-4+b1 [110 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libp11-kit0 amd64 0.25.10-1+b1 [444 kB] Get:30 http://deb.debian.org/debian sid/main amd64 libtasn1-6 amd64 4.21.0-2 [50.4 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libgnutls30t64 amd64 3.8.11-3 [1509 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.22.1-2 [33.1 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.22.1-2 [81.1 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-6+b1 [9784 B] Get:35 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.22.1-2 [337 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.22.1-2 [139 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-10 [19.8 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-10 [57.8 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libldap2 amd64 2.6.10+dfsg-1+b1 [195 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.64.0-1.1+b1 [76.2 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libngtcp2-crypto-gnutls8 amd64 1.16.0-1 [25.2 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libpsl5t64 amd64 0.21.2-1.1+b2 [59.8 kB] Get:43 http://deb.debian.org/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-3+b1 [60.7 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libssh2-1t64 amd64 1.11.1-1+b1 [245 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libcurl3t64-gnutls amd64 8.18.0-2 [404 kB] Get:46 http://deb.debian.org/debian sid/main amd64 libngtcp2-crypto-ossl0 amd64 1.16.0-1 [27.5 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libcurl4t64 amd64 8.18.0-2 [412 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libdeflate0 amd64 1.23-2+b1 [49.5 kB] Get:49 http://deb.debian.org/debian sid/main amd64 libsz2 amd64 1.1.5-1 [19.0 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libhdf5-310 amd64 1.14.6+repack-2 [1360 kB] Get:51 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-310 amd64 1.14.6+repack-2 [64.7 kB] Get:52 http://deb.debian.org/debian sid/main amd64 libhtscodecs2 amd64 1.6.1-2+b1 [101 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libhts3t64 amd64 1.22.1+ds2-1+b1 [477 kB] Get:54 http://deb.debian.org/debian sid/main amd64 liblzf1 amd64 3.6-4+b4 [10.1 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libqhull-r8.0 amd64 2020.2-8 [250 kB] Get:56 http://deb.debian.org/debian sid/main amd64 python3-attr all 25.4.0-1 [73.1 kB] Get:57 http://deb.debian.org/debian sid/main amd64 python3-certifi all 2026.1.4+ds-1 [10.1 kB] Get:58 http://deb.debian.org/debian sid/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get:59 http://deb.debian.org/debian sid/main amd64 python3-charset-normalizer amd64 3.4.4-2 [171 kB] Get:60 http://deb.debian.org/debian sid/main amd64 python3-dateutil all 2.9.0-4 [79.4 kB] Get:61 http://deb.debian.org/debian sid/main amd64 python3-decorator all 5.2.1-2 [33.0 kB] Get:62 http://deb.debian.org/debian sid/main amd64 python3-fastjsonschema all 2.21.1-1 [22.4 kB] Get:63 http://deb.debian.org/debian sid/main amd64 python3-h5py-serial amd64 3.15.1-4 [1475 kB] Get:64 http://deb.debian.org/debian sid/main amd64 python3-h5py all 3.15.1-4 [19.0 kB] Get:65 http://deb.debian.org/debian sid/main amd64 python3-idna all 3.10-1 [42.0 kB] Get:66 http://deb.debian.org/debian sid/main amd64 python3-markupsafe amd64 3.0.3-1+b1 [14.3 kB] Get:67 http://deb.debian.org/debian sid/main amd64 python3-jinja2 all 3.1.6-1 [107 kB] Get:68 http://deb.debian.org/debian sid/main amd64 python3-rpds-py amd64 0.28.0-1 [341 kB] Get:69 http://deb.debian.org/debian sid/main amd64 python3-referencing all 0.36.2-2 [23.8 kB] Get:70 http://deb.debian.org/debian sid/main amd64 python3-jsonschema-specifications all 2023.12.1-4 [9092 B] Get:71 http://deb.debian.org/debian sid/main amd64 python3-jsonschema all 4.25.1-2 [75.7 kB] Get:72 http://deb.debian.org/debian sid/main amd64 python3-platformdirs all 4.5.1-1 [16.9 kB] Get:73 http://deb.debian.org/debian sid/main amd64 python3-traitlets all 5.14.3+really5.14.3-3 [71.1 kB] Get:74 http://deb.debian.org/debian sid/main amd64 python3-jupyter-core all 5.9.1-1 [36.5 kB] Get:75 http://deb.debian.org/debian sid/main amd64 python3-nbformat all 5.10.4-1 [44.0 kB] Get:76 http://deb.debian.org/debian sid/main amd64 python3-pytz all 2025.2-5 [31.8 kB] Get:77 http://deb.debian.org/debian sid/main amd64 python3-pandas-lib amd64 2.3.3+dfsg-3 [6583 kB] Get:78 http://deb.debian.org/debian sid/main amd64 python3-pandas all 2.3.3+dfsg-3 [2935 kB] Get:79 http://deb.debian.org/debian sid/main amd64 python3-urllib3 all 2.6.3-1 [120 kB] Get:80 http://deb.debian.org/debian sid/main amd64 python3-requests all 2.32.5+dfsg-1 [72.4 kB] Get:81 http://deb.debian.org/debian sid/main amd64 python3-tenacity all 9.1.2-3 [46.5 kB] Get:82 http://deb.debian.org/debian sid/main amd64 python3-plotly all 5.20.0+dfsg-1.1 [2726 kB] Get:83 http://deb.debian.org/debian sid/main amd64 python3-pysam amd64 0.23.3+ds-2+b1 [4456 kB] Get:84 http://deb.debian.org/debian sid/main amd64 python3-scipy amd64 1.16.3-4 [18.6 MB] Get:85 http://deb.debian.org/debian sid/main amd64 python3-tqdm all 4.67.3-1 [91.8 kB] Preconfiguring packages ... Fetched 66.3 MB in 0s (139 MB/s) Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5449 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.7.4-1) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../libpython3.13-minimal_3.13.12-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.12-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.12-1_amd64.deb ... Unpacking python3.13-minimal (3.13.12-1) ... Setting up libpython3.13-minimal:amd64 (3.13.12-1) ... Setting up libexpat1:amd64 (2.7.4-1) ... Setting up python3.13-minimal (3.13.12-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5783 files and directories currently installed.) 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-3+b1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../6-libsqlite3-0_3.46.1-9_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.1-9) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.12-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.12-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.12-1_amd64.deb ... Unpacking python3.13 (3.13.12-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../9-libpython3-stdlib_3.13.9-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.13.9-3) ... Setting up python3-minimal (3.13.9-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6292 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.9-3_amd64.deb ... Unpacking python3 (3.13.9-3) ... Selecting previously unselected package python3-numpy-dev:amd64. Preparing to unpack .../01-python3-numpy-dev_1%3a2.3.5+ds-3_amd64.deb ... Unpacking python3-numpy-dev:amd64 (1:2.3.5+ds-3) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../02-libblas3_3.12.1-7+b1_amd64.deb ... Unpacking libblas3:amd64 (3.12.1-7+b1) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../03-libgfortran5_15.2.0-12_amd64.deb ... Unpacking libgfortran5:amd64 (15.2.0-12) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../04-liblapack3_3.12.1-7+b1_amd64.deb ... Unpacking liblapack3:amd64 (3.12.1-7+b1) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../05-python3-numpy_1%3a2.3.5+ds-3_amd64.deb ... Unpacking python3-numpy (1:2.3.5+ds-3) ... Selecting previously unselected package openssl. Preparing to unpack .../06-openssl_3.5.5-1_amd64.deb ... Unpacking openssl (3.5.5-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../07-ca-certificates_20250419_all.deb ... Unpacking ca-certificates (20250419) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../08-libbrotli1_1.2.0-2_amd64.deb ... Unpacking libbrotli1:amd64 (1.2.0-2) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../09-libcom-err2_1.47.2-3+b8_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2-3+b8) ... Selecting previously unselected package libnghttp3-9:amd64. Preparing to unpack .../10-libnghttp3-9_1.12.0-1_amd64.deb ... Unpacking libnghttp3-9:amd64 (1.12.0-1) ... Selecting previously unselected package libngtcp2-16:amd64. Preparing to unpack .../11-libngtcp2-16_1.16.0-1_amd64.deb ... Unpacking libngtcp2-16:amd64 (1.16.0-1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../12-libunistring5_1.3-2+b1_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2+b1) ... Selecting previously unselected package libidn2-0:amd64. Preparing to unpack .../13-libidn2-0_2.3.8-4+b1_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.8-4+b1) ... Selecting previously unselected package libp11-kit0:amd64. 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Unpacking python3-traitlets (5.14.3+really5.14.3-3) ... Selecting previously unselected package python3-jupyter-core. Preparing to unpack .../59-python3-jupyter-core_5.9.1-1_all.deb ... Unpacking python3-jupyter-core (5.9.1-1) ... Selecting previously unselected package python3-nbformat. Preparing to unpack .../60-python3-nbformat_5.10.4-1_all.deb ... Unpacking python3-nbformat (5.10.4-1) ... Selecting previously unselected package python3-pytz. Preparing to unpack .../61-python3-pytz_2025.2-5_all.deb ... Unpacking python3-pytz (2025.2-5) ... Selecting previously unselected package python3-pandas-lib:amd64. Preparing to unpack .../62-python3-pandas-lib_2.3.3+dfsg-3_amd64.deb ... Unpacking python3-pandas-lib:amd64 (2.3.3+dfsg-3) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../63-python3-pandas_2.3.3+dfsg-3_all.deb ... Unpacking python3-pandas (2.3.3+dfsg-3) ... Selecting previously unselected package python3-urllib3. 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Preparing to unpack .../70-python3-tqdm_4.67.3-1_all.deb ... Unpacking python3-tqdm (4.67.3-1) ... Selecting previously unselected package piuparts-depends-dummy. Preparing to unpack .../71-piuparts-depends-dummy.deb ... Unpacking piuparts-depends-dummy (0.invalid.0) ... Setting up libhtscodecs2:amd64 (1.6.1-2+b1) ... Setting up media-types (14.0.0) ... Setting up libkeyutils1:amd64 (1.6.3-6+b1) ... Setting up libbrotli1:amd64 (1.2.0-2) ... Setting up libsqlite3-0:amd64 (3.46.1-9) ... Setting up libnghttp2-14:amd64 (1.64.0-1.1+b1) ... Setting up libdeflate0:amd64 (1.23-2+b1) ... Setting up libqhull-r8.0:amd64 (2020.2-8) ... Setting up libcom-err2:amd64 (1.47.2-3+b8) ... Setting up libkrb5support0:amd64 (1.22.1-2) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-10) ... Setting up libblas3:amd64 (3.12.1-7+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up liblzf1:amd64 (3.6-4+b4) ... Setting up libunistring5:amd64 (1.3-2+b1) ... Setting up python3-numpy-dev:amd64 (1:2.3.5+ds-3) ... Setting up libk5crypto3:amd64 (1.22.1-2) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-10) ... Setting up libgfortran5:amd64 (15.2.0-12) ... Setting up libnghttp3-9:amd64 (1.12.0-1) ... Setting up libffi8:amd64 (3.5.2-3+b1) ... Setting up libtasn1-6:amd64 (4.21.0-2) ... Setting up netbase (6.5) ... Setting up libngtcp2-16:amd64 (1.16.0-1) ... Setting up libkrb5-3:amd64 (1.22.1-2) ... Setting up libssh2-1t64:amd64 (1.11.1-1+b1) ... Setting up openssl (3.5.5-1) ... Setting up readline-common (8.3-3) ... Setting up libldap2:amd64 (2.6.10+dfsg-1+b1) ... Setting up libsz2:amd64 (1.1.5-1) ... Setting up liblapack3:amd64 (3.12.1-7+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libidn2-0:amd64 (2.3.8-4+b1) ... Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libp11-kit0:amd64 (0.25.10-1+b1) ... Setting up libgssapi-krb5-2:amd64 (1.22.1-2) ... Setting up libngtcp2-crypto-ossl0:amd64 (1.16.0-1) ... Setting up libreadline8t64:amd64 (8.3-3+b1) ... Setting up libpython3.13-stdlib:amd64 (3.13.12-1) ... Setting up libpython3-stdlib:amd64 (3.13.9-3) ... Setting up libgnutls30t64:amd64 (3.8.11-3) ... Setting up python3.13 (3.13.12-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b2) ... Setting up python3 (3.13.9-3) ... Setting up python3-markupsafe (3.0.3-1+b1) ... Setting up python3-platformdirs (4.5.1-1) ... Setting up python3-decorator (5.2.1-2) ... Setting up python3-jinja2 (3.1.6-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-certifi (2026.1.4+ds-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-3+b1) ... Setting up python3-idna (3.10-1) ... Setting up python3-numpy (1:2.3.5+ds-3) ... Setting up python3-urllib3 (2.6.3-1) ... Setting up python3-rpds-py (0.28.0-1) ... Setting up python3-fastjsonschema (2.21.1-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-3) ... Setting up python3-dateutil (2.9.0-4) ... Setting up python3-jupyter-core (5.9.1-1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.16.0-1) ... Setting up python3-attr (25.4.0-1) ... Setting up python3-scipy (1.16.3-4) ... Setting up libcurl4t64:amd64 (8.18.0-2) ... Setting up python3-charset-normalizer (3.4.4-2) ... Setting up python3-tenacity (9.1.2-3) ... Setting up python3-pandas-lib:amd64 (2.3.3+dfsg-3) ... Setting up python3-tqdm (4.67.3-1) ... Setting up libcurl3t64-gnutls:amd64 (8.18.0-2) ... Setting up python3-pytz (2025.2-5) ... Setting up python3-pandas (2.3.3+dfsg-3) ... Setting up python3-requests (2.32.5+dfsg-1) ... Setting up libhdf5-310:amd64 (1.14.6+repack-2) ... Setting up libhts3t64:amd64 (1.22.1+ds2-1+b1) ... Setting up python3-referencing (0.36.2-2) ... Setting up libhdf5-hl-310:amd64 (1.14.6+repack-2) ... Setting up python3-pysam (0.23.3+ds-2+b1) ... Setting up python3-h5py-serial (3.15.1-4) ... Setting up python3-h5py (3.15.1-4) ... Setting up python3-jsonschema-specifications (2023.12.1-4) ... Setting up python3-jsonschema (4.25.1-2) ... Setting up python3-nbformat (5.10.4-1) ... Setting up python3-plotly (5.20.0+dfsg-1.1) ... Setting up piuparts-depends-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.42-11+b1) ... Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m36.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 0m36.3s INFO: Installation of ['./tmp/piuparts-depends-dummy.deb'] ok 0m36.3s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmp9pnbi08t/./tmp/piuparts-depends-dummy.deb 0m36.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m36.3s DUMP: piuparts-depends-dummy install ok installed 0m36.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m36.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m36.3s DUMP: (Reading database ... 26748 files and directories currently installed.) Removing piuparts-depends-dummy (0.invalid.0) ... 0m36.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m36.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'clean'] 0m36.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'clean'] 0m36.4s DEBUG: Recording chroot state 0m37.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 0m39.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 0m42.1s DEBUG: No broken symlinks as far as we can find. 0m42.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy'] 0m42.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m42.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy'] 0m42.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy', 'pycoqc'] 0m42.8s DUMP: pycoqc: Installed: (none) Candidate: 2.5.2+dfsg-5 Version table: 2.5.2+dfsg-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m42.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy', 'pycoqc'] 0m42.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-y', 'install', 'pycoqc=2.5.2+dfsg-5'] 0m43.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following NEW packages will be installed: pycoqc 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 36.7 kB of archives. After this operation, 201 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 pycoqc all 2.5.2+dfsg-5 [36.7 kB] Fetched 36.7 kB in 0s (927 kB/s) Selecting previously unselected package pycoqc. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 26748 files and directories currently installed.) Preparing to unpack .../pycoqc_2.5.2+dfsg-5_all.deb ... Unpacking pycoqc (2.5.2+dfsg-5) ... Setting up pycoqc (2.5.2+dfsg-5) ... 0m43.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-y', 'install', 'pycoqc=2.5.2+dfsg-5'] 0m43.7s INFO: Running scripts post_install 0m43.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_install_exceptions'] 0m43.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_install_exceptions'] 0m43.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'systemd-tmpfiles', '--cat-config'] 0m43.7s DUMP: chroot: failed to run command 'systemd-tmpfiles': No such file or directory 0m43.7s DEBUG: Command failed (status=127), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'systemd-tmpfiles', '--cat-config'] 0m43.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'remove', 'pycoqc'] 0m44.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages were automatically installed and are no longer required: libblas3 libbrotli1 libcom-err2 libcurl3t64-gnutls libcurl4t64 libdeflate0 libexpat1 libffi8 libgfortran5 libgnutls30t64 libgssapi-krb5-2 libhdf5-310 libhdf5-hl-310 libhts3t64 libhtscodecs2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap2 liblzf1 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl0 libp11-kit0 libpsl5t64 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libsz2 libtasn1-6 media-types netbase python3 python3-attr python3-certifi python3-chardet python3-charset-normalizer python3-dateutil python3-decorator python3-fastjsonschema python3-h5py python3-h5py-serial python3-idna python3-jinja2 python3-jsonschema python3-jsonschema-specifications python3-jupyter-core python3-markupsafe python3-minimal python3-nbformat python3-numpy python3-numpy-dev python3-pandas python3-pandas-lib python3-platformdirs python3-plotly python3-pysam python3-pytz python3-referencing python3-requests python3-rpds-py python3-scipy python3-tenacity python3-tqdm python3-traitlets python3-urllib3 python3.13 python3.13-minimal readline-common Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: pycoqc 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. After this operation, 201 kB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 26777 files and directories currently installed.) Removing pycoqc (2.5.2+dfsg-5) ... 0m44.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'remove', 'pycoqc'] 0m44.5s INFO: Reinstalling after remove 0m44.5s INFO: Running scripts pre_install 0m44.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_database-server'] 0m44.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_database-server'] 0m44.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_exceptions'] 0m44.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_exceptions'] 0m44.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_extras'] 0m44.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_extras'] 0m44.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture'] 0m44.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture'] 0m44.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m44.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m44.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy'] 0m44.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m44.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy'] 0m44.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy', 'pycoqc'] 0m44.7s DUMP: pycoqc: Installed: (none) Candidate: 2.5.2+dfsg-5 Version table: 2.5.2+dfsg-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m44.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy', 'pycoqc'] 0m44.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-y', 'install', 'pycoqc=2.5.2+dfsg-5'] 0m45.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following NEW packages will be installed: pycoqc 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/36.7 kB of archives. After this operation, 201 kB of additional disk space will be used. Selecting previously unselected package pycoqc. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 26748 files and directories currently installed.) Preparing to unpack .../pycoqc_2.5.2+dfsg-5_all.deb ... Unpacking pycoqc (2.5.2+dfsg-5) ... Setting up pycoqc (2.5.2+dfsg-5) ... 0m45.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-y', 'install', 'pycoqc=2.5.2+dfsg-5'] 0m45.5s INFO: Running scripts post_install 0m45.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_install_exceptions'] 0m45.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_install_exceptions'] 0m45.5s INFO: Running scripts pre_install 0m45.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_database-server'] 0m45.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_database-server'] 0m45.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_exceptions'] 0m45.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_exceptions'] 0m45.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_extras'] 0m45.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_extras'] 0m45.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture'] 0m45.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture'] 0m45.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m45.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m45.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy'] 0m45.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m45.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy'] 0m45.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy', 'pycoqc'] 0m45.6s DUMP: pycoqc: Installed: 2.5.2+dfsg-5 Candidate: 2.5.2+dfsg-5 Version table: *** 2.5.2+dfsg-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m45.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-cache', 'policy', 'pycoqc'] 0m45.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-y', 'install', '--reinstall', 'pycoqc=2.5.2+dfsg-5'] 0m46.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... 0 upgraded, 0 newly installed, 1 reinstalled, 0 to remove and 0 not upgraded. Need to get 0 B/36.7 kB of archives. After this operation, 0 B of additional disk space will be used. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 26777 files and directories currently installed.) Preparing to unpack .../pycoqc_2.5.2+dfsg-5_all.deb ... Unpacking pycoqc (2.5.2+dfsg-5) over (2.5.2+dfsg-5) ... Setting up pycoqc (2.5.2+dfsg-5) ... 0m46.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', '-y', 'install', '--reinstall', 'pycoqc=2.5.2+dfsg-5'] 0m46.8s INFO: Running scripts post_install 0m46.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_install_exceptions'] 0m46.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_install_exceptions'] 0m46.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 0m48.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 0m51.7s DEBUG: No broken symlinks as far as we can find. 0m53.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', '-ac', '--ignore-obsolete'] 0m55.4s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', '-ac', '--ignore-obsolete'] 0m55.4s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m55.5s DUMP: 0.15.9~deb12u1 0m55.5s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m55.5s INFO: Running adequate version 0.15.9~deb12u1 now. 0m55.5s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'pycoqc'] 0m55.6s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'pycoqc'] 0m55.6s INFO: Running scripts pre_remove 0m55.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m55.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m55.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m55.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m55.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m57.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m57.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m57.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m57.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m57.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m57.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_exceptions'] 0m57.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_exceptions'] 0m57.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_preseed_cleanup'] 0m57.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/pre_remove_preseed_cleanup'] 0m57.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m57.7s DUMP: install ok installed apt apt 3.1.15 install ok installed base-files base-files 14 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-1 install ok installed bsdutils bsdutils 1:2.41.3-3 install ok installed ca-certificates ca-certificates 20250419 install ok installed coreutils coreutils 9.7-3 install ok installed dash dash 0.5.12-12 install ok installed dbconfig-common dbconfig-common 2.0.25 install ok installed debconf debconf 1.5.91 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.23.2 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.5 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-15-base:amd64 gcc-15-base 15.2.0-12 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.13-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69 install ok installed libacl1:amd64 libacl1 2.3.2-2+b2 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.1.15 install ok installed libattr1:amd64 libattr1 1:2.5.2-3+b1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b1 install ok installed libblas3:amd64 libblas3 3.12.1-7+b1 install ok installed libblkid1:amd64 libblkid1 2.41.3-3 install ok installed libbrotli1:amd64 libbrotli1 1.2.0-2 install ok installed libbsd0:amd64 libbsd0 0.12.2-2+b1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b1 install ok installed libc-bin libc-bin 2.42-11+b1 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.42-11+b1 install ok installed libc6:amd64 libc6 2.42-11+b1 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4+b2 install ok installed libcap2:amd64 libcap2 1:2.75-10+b5 install ok installed libcom-err2:amd64 libcom-err2 1.47.2-3+b8 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.1-1 install ok installed libcurl3t64-gnutls:amd64 libcurl3t64-gnutls 8.18.0-2 install ok installed libcurl4t64:amd64 libcurl4t64 8.18.0-2 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.282+b2 install ok installed libdeflate0:amd64 libdeflate0 1.23-2+b1 install ok installed libexpat1:amd64 libexpat1 2.7.4-1 install ok installed libffi8:amd64 libffi8 3.5.2-3+b1 install ok installed libgcc-s1:amd64 libgcc-s1 15.2.0-12 install ok installed libgfortran5:amd64 libgfortran5 15.2.0-12 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.11-3 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.22.1-2 install ok installed libhdf5-310:amd64 libhdf5-310 1.14.6+repack-2 install ok installed libhdf5-hl-310:amd64 libhdf5-hl-310 1.14.6+repack-2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1 install ok installed libhts3t64:amd64 libhts3t64 1.22.1+ds2-1+b1 install ok installed libhtscodecs2:amd64 libhtscodecs2 1.6.1-2+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.8-4+b1 install ok installed libk5crypto3:amd64 libk5crypto3 1.22.1-2 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-6+b1 install ok installed libkrb5-3:amd64 libkrb5-3 1.22.1-2 install ok installed libkrb5support0:amd64 libkrb5support0 1.22.1-2 install ok installed liblapack3:amd64 liblapack3 3.12.1-7+b1 install ok installed libldap2:amd64 libldap2 2.6.10+dfsg-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-6 install ok installed liblzf1:amd64 liblzf1 3.6-4+b4 install ok installed liblzma5:amd64 liblzma5 5.8.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2+b2 install ok installed libmount1:amd64 libmount1 2.41.3-3 install ok installed libncursesw6:amd64 libncursesw6 6.6+20251231-1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.64.0-1.1+b1 install ok installed libnghttp3-9:amd64 libnghttp3-9 1.12.0-1 install ok installed libngtcp2-16:amd64 libngtcp2-16 1.16.0-1 install ok installed libngtcp2-crypto-gnutls8:amd64 libngtcp2-crypto-gnutls8 1.16.0-1 install ok installed libngtcp2-crypto-ossl0:amd64 libngtcp2-crypto-ossl0 1.16.0-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.10-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-5+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-5+b1 install ok installed libpam-runtime libpam-runtime 1.7.0-5 install ok installed libpam0g:amd64 libpam0g 1.7.0-5+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.46-1+b1 install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-9+b1 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.2-1.1+b2 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.13.9-3 install ok installed libpython3.13-minimal:amd64 libpython3.13-minimal 3.13.12-1 install ok installed libpython3.13-stdlib:amd64 libpython3.13-stdlib 3.13.12-1 install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-8 install ok installed libreadline8t64:amd64 libreadline8t64 8.3-3+b1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-3+b1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-10 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-10 install ok installed libseccomp2:amd64 libseccomp2 2.6.0-2+b1 install ok installed libselinux1:amd64 libselinux1 3.9-4+b1 install ok installed libsemanage-common libsemanage-common 3.9-1 install ok installed libsemanage2:amd64 libsemanage2 3.9-1+b1 install ok installed libsepol2:amd64 libsepol2 3.9-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.41.3-3 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-9 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.1-1+b1 install ok installed libssl3t64:amd64 libssl3t64 3.5.5-1 install ok installed libstdc++6:amd64 libstdc++6 15.2.0-12 install ok installed libsystemd0:amd64 libsystemd0 259-1 install ok installed libsz2:amd64 libsz2 1.1.5-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.21.0-2 install ok installed libtext-charwidth-perl:amd64 libtext-charwidth-perl 0.04-11+b5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-10 install ok installed libtinfo6:amd64 libtinfo6 6.6+20251231-1 install ok installed libudev1:amd64 libudev1 259-1 install ok installed libunistring5:amd64 libunistring5 1.3-2+b1 install ok installed libuuid1:amd64 libuuid1 2.41.3-3 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-3+b1 install ok installed login login 1:4.16.0-2+really2.41.3-3 install ok installed login.defs login.defs 1:4.19.2-1 install ok installed mawk mawk 1.3.4.20260129-1 install ok installed media-types media-types 14.0.0 install ok installed mount mount 2.41.3-3 install ok installed ncurses-base ncurses-base 6.6+20251231-1 install ok installed ncurses-bin ncurses-bin 6.6+20251231-1 install ok installed netbase netbase 6.5 install ok installed openssl openssl 3.5.5-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.5.5-1 install ok installed passwd passwd 1:4.19.2-1 install ok installed perl-base perl-base 5.40.1-7 install ok installed procps procps 2:4.0.4-9+b1 install ok installed pycoqc pycoqc 2.5.2+dfsg-5 install ok installed python3 python3 3.13.9-3 install ok installed python3-attr python3-attr 25.4.0-1 install ok installed python3-certifi python3-certifi 2026.1.4+ds-1 install ok installed python3-chardet python3-chardet 5.2.0+dfsg-2 install ok installed python3-charset-normalizer python3-charset-normalizer 3.4.4-2 install ok installed python3-dateutil python3-dateutil 2.9.0-4 install ok installed python3-decorator python3-decorator 5.2.1-2 install ok installed python3-fastjsonschema python3-fastjsonschema 2.21.1-1 install ok installed python3-h5py python3-h5py 3.15.1-4 install ok installed python3-h5py-serial python3-h5py-serial 3.15.1-4 install ok installed python3-idna python3-idna 3.10-1 install ok installed python3-jinja2 python3-jinja2 3.1.6-1 install ok installed python3-jsonschema python3-jsonschema 4.25.1-2 install ok installed python3-jsonschema-specifications python3-jsonschema-specifications 2023.12.1-4 install ok installed python3-jupyter-core python3-jupyter-core 5.9.1-1 install ok installed python3-markupsafe python3-markupsafe 3.0.3-1+b1 install ok installed python3-minimal python3-minimal 3.13.9-3 install ok installed python3-nbformat python3-nbformat 5.10.4-1 install ok installed python3-numpy python3-numpy 1:2.3.5+ds-3 install ok installed python3-numpy-dev:amd64 python3-numpy-dev 1:2.3.5+ds-3 install ok installed python3-pandas python3-pandas 2.3.3+dfsg-3 install ok installed python3-pandas-lib:amd64 python3-pandas-lib 2.3.3+dfsg-3 install ok installed python3-platformdirs python3-platformdirs 4.5.1-1 install ok installed python3-plotly python3-plotly 5.20.0+dfsg-1.1 install ok installed python3-pysam python3-pysam 0.23.3+ds-2+b1 install ok installed python3-pytz python3-pytz 2025.2-5 install ok installed python3-referencing python3-referencing 0.36.2-2 install ok installed python3-requests python3-requests 2.32.5+dfsg-1 install ok installed python3-rpds-py python3-rpds-py 0.28.0-1 install ok installed python3-scipy python3-scipy 1.16.3-4 install ok installed python3-tenacity python3-tenacity 9.1.2-3 install ok installed python3-tqdm python3-tqdm 4.67.3-1 install ok installed python3-traitlets python3-traitlets 5.14.3+really5.14.3-3 install ok installed python3-urllib3 python3-urllib3 2.6.3-1 install ok installed python3.13 python3.13 3.13.12-1 install ok installed python3.13-minimal python3.13-minimal 3.13.12-1 install ok installed readline-common readline-common 8.3-3 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.26 install ok installed sqv sqv 1.3.0-5 install ok installed sysvinit-utils sysvinit-utils 3.15-6 install ok installed tar tar 1.35+dfsg-3.1 install ok installed tzdata tzdata 2025c-3 install ok installed ucf ucf 3.0052 install ok installed util-linux util-linux 2.41.3-3 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-2 0m57.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m57.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'remove', '--allow-remove-essential', 'ca-certificates', 'libblas3:amd64', 'libbrotli1:amd64', 'libcom-err2:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'libgnutls30t64:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-310:amd64', 'libhdf5-hl-310:amd64', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libidn2-0:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'liblzf1:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libp11-kit0:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libunistring5:amd64', 'media-types', 'netbase', 'openssl', 'python3', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-dateutil', 'python3-decorator', 'python3-fastjsonschema', 'python3-h5py', 'python3-h5py-serial', 'python3-idna', 'python3-jinja2', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-markupsafe', 'python3-minimal', 'python3-nbformat', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-platformdirs', 'python3-plotly', 'python3-pysam', 'python3-pytz', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-scipy', 'python3-tenacity', 'python3-tqdm', 'python3-traitlets', 'python3-urllib3', 'python3.13', 'python3.13-minimal', 'readline-common', 'pycoqc'] 1m3.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: ca-certificates libblas3 libbrotli1 libcom-err2 libcurl3t64-gnutls libcurl4t64 libdeflate0 libexpat1 libffi8 libgfortran5 libgnutls30t64 libgssapi-krb5-2 libhdf5-310 libhdf5-hl-310 libhts3t64 libhtscodecs2 libidn2-0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap2 liblzf1 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl0 libp11-kit0 libpsl5t64 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libsz2 libtasn1-6 libunistring5 media-types netbase openssl pycoqc python3 python3-attr python3-certifi python3-chardet python3-charset-normalizer python3-dateutil python3-decorator python3-fastjsonschema python3-h5py python3-h5py-serial python3-idna python3-jinja2 python3-jsonschema python3-jsonschema-specifications python3-jupyter-core python3-markupsafe python3-minimal python3-nbformat python3-numpy python3-numpy-dev python3-pandas python3-pandas-lib python3-platformdirs python3-plotly python3-pysam python3-pytz python3-referencing python3-requests python3-rpds-py python3-scipy python3-tenacity python3-tqdm python3-traitlets python3-urllib3 python3.13 python3.13-minimal readline-common 0 upgraded, 0 newly installed, 85 to remove and 0 not upgraded. After this operation, 394 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 26777 files and directories currently installed.) Removing pycoqc (2.5.2+dfsg-5) ... Removing python3-plotly (5.20.0+dfsg-1.1) ... Removing python3-requests (2.32.5+dfsg-1) ... Removing python3-certifi (2026.1.4+ds-1) ... Removing ca-certificates (20250419) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing python3-scipy (1.16.3-4) ... Removing python3-pandas (2.3.3+dfsg-3) ... Removing python3-pandas-lib:amd64 (2.3.3+dfsg-3) ... Removing python3-h5py (3.15.1-4) ... Removing python3-h5py-serial (3.15.1-4) ... Removing python3-numpy (1:2.3.5+ds-3) ... Removing liblapack3:amd64 (3.12.1-7+b1) ... Removing libblas3:amd64 (3.12.1-7+b1) ... Removing libhdf5-hl-310:amd64 (1.14.6+repack-2) ... Removing libhdf5-310:amd64 (1.14.6+repack-2) ... Removing libcurl4t64:amd64 (8.18.0-2) ... Removing python3-pysam (0.23.3+ds-2+b1) ... Removing libhts3t64:amd64 (1.22.1+ds2-1+b1) ... Removing libcurl3t64-gnutls:amd64 (8.18.0-2) ... Removing libbrotli1:amd64 (1.2.0-2) ... Removing libgssapi-krb5-2:amd64 (1.22.1-2) ... Removing libkrb5-3:amd64 (1.22.1-2) ... Removing libcom-err2:amd64 (1.47.2-3+b8) ... Removing libdeflate0:amd64 (1.23-2+b1) ... Removing python3-nbformat (5.10.4-1) ... Removing python3-jsonschema (4.25.1-2) ... Removing python3-jsonschema-specifications (2023.12.1-4) ... Removing python3-referencing (0.36.2-2) ... Removing python3-rpds-py (0.28.0-1) ... Removing python3-jupyter-core (5.9.1-1) ... Removing python3-traitlets (5.14.3+really5.14.3-3) ... Removing python3-charset-normalizer (3.4.4-2) ... Removing python3-tqdm (4.67.3-1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-3+b1) ... Removing libgfortran5:amd64 (15.2.0-12) ... Removing libhtscodecs2:amd64 (1.6.1-2+b1) ... Removing libpsl5t64:amd64 (0.21.2-1.1+b2) ... Removing libk5crypto3:amd64 (1.22.1-2) ... Removing libkeyutils1:amd64 (1.6.3-6+b1) ... Removing libkrb5support0:amd64 (1.22.1-2) ... Removing libldap2:amd64 (2.6.10+dfsg-1+b1) ... Removing liblzf1:amd64 (3.6-4+b4) ... Removing libnghttp2-14:amd64 (1.64.0-1.1+b1) ... Removing libnghttp3-9:amd64 (1.12.0-1) ... Removing libngtcp2-crypto-ossl0:amd64 (1.16.0-1) ... Removing libngtcp2-crypto-gnutls8:amd64 (1.16.0-1) ... Removing libngtcp2-16:amd64 (1.16.0-1) ... Removing libqhull-r8.0:amd64 (2020.2-8) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-10) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-10) ... Removing libssh2-1t64:amd64 (1.11.1-1+b1) ... Removing libsz2:amd64 (1.1.5-1) ... Removing openssl (3.5.5-1) ... Removing python3-attr (25.4.0-1) ... Removing python3-chardet (5.2.0+dfsg-2) ... Removing python3-dateutil (2.9.0-4) ... Removing python3-decorator (5.2.1-2) ... Removing python3-fastjsonschema (2.21.1-1) ... Removing python3-idna (3.10-1) ... Removing python3-jinja2 (3.1.6-1) ... Removing python3-markupsafe (3.0.3-1+b1) ... Removing python3-numpy-dev:amd64 (1:2.3.5+ds-3) ... Removing python3-platformdirs (4.5.1-1) ... Removing python3-pytz (2025.2-5) ... Removing python3-tenacity (9.1.2-3) ... Removing python3-urllib3 (2.6.3-1) ... Removing python3 (3.13.9-3) ... Removing python3.13 (3.13.12-1) ... Removing python3-minimal (3.13.9-3) ... Removing python3.13-minimal (3.13.12-1) ... Removing libexpat1:amd64 (2.7.4-1) ... Removing libpython3-stdlib:amd64 (3.13.9-3) ... Removing libpython3.13-stdlib:amd64 (3.13.12-1) ... find: '/usr/lib/python3': No such file or directory Removing libgnutls30t64:amd64 (3.8.11-3) ... Removing libp11-kit0:amd64 (0.25.10-1+b1) ... Removing libffi8:amd64 (3.5.2-3+b1) ... Removing libidn2-0:amd64 (2.3.8-4+b1) ... Removing libpython3.13-minimal:amd64 (3.13.12-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.3-3+b1) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsqlite3-0:amd64 (3.46.1-9) ... Removing libtasn1-6:amd64 (4.21.0-2) ... Removing libunistring5:amd64 (1.3-2+b1) ... Removing media-types (14.0.0) ... Removing netbase (6.5) ... Removing readline-common (8.3-3) ... Processing triggers for libc-bin (2.42-11+b1) ... 1m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'remove', '--allow-remove-essential', 'ca-certificates', 'libblas3:amd64', 'libbrotli1:amd64', 'libcom-err2:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'libgnutls30t64:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-310:amd64', 'libhdf5-hl-310:amd64', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libidn2-0:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'liblzf1:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libp11-kit0:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libunistring5:amd64', 'media-types', 'netbase', 'openssl', 'python3', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-dateutil', 'python3-decorator', 'python3-fastjsonschema', 'python3-h5py', 'python3-h5py-serial', 'python3-idna', 'python3-jinja2', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-markupsafe', 'python3-minimal', 'python3-nbformat', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-platformdirs', 'python3-plotly', 'python3-pysam', 'python3-pytz', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-scipy', 'python3-tenacity', 'python3-tqdm', 'python3-traitlets', 'python3-urllib3', 'python3.13', 'python3.13-minimal', 'readline-common', 'pycoqc'] 1m3.9s INFO: Running scripts post_remove 1m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_remove_cleanup'] 1m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_remove_cleanup'] 1m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_remove_exceptions'] 1m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_remove_exceptions'] 1m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--purge', 'ca-certificates', 'libblas3:amd64', 'libbrotli1:amd64', 'libcom-err2:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'libgnutls30t64:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-310:amd64', 'libhdf5-hl-310:amd64', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libidn2-0:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'liblzf1:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libp11-kit0:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libunistring5:amd64', 'media-types', 'netbase', 'openssl', 'python3', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-dateutil', 'python3-decorator', 'python3-fastjsonschema', 'python3-h5py', 'python3-h5py-serial', 'python3-idna', 'python3-jinja2', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-markupsafe', 'python3-minimal', 'python3-nbformat', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-platformdirs', 'python3-plotly', 'python3-pysam', 'python3-pytz', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-scipy', 'python3-tenacity', 'python3-tqdm', 'python3-traitlets', 'python3-urllib3', 'python3.13', 'python3.13-minimal', 'readline-common'] 1m4.1s DUMP: (Reading database ... 5459 files and directories currently installed.) Purging configuration files for ca-certificates (20250419) ... Removing dangling symlinks from /etc/ssl/certs... done. dpkg: warning: ignoring request to remove libblas3 which is not installed dpkg: warning: ignoring request to remove libbrotli1 which is not installed dpkg: warning: ignoring request to remove libcom-err2 which is not installed dpkg: warning: ignoring request to remove libcurl3t64-gnutls which is not installed dpkg: warning: ignoring request to remove libcurl4t64 which is not installed dpkg: warning: ignoring request to remove libdeflate0 which is not installed dpkg: warning: ignoring request to remove libexpat1 which is not installed dpkg: warning: ignoring request to remove libffi8 which is not installed dpkg: warning: ignoring request to remove libgfortran5 which is not installed dpkg: warning: ignoring request to remove libgnutls30t64 which is not installed Purging configuration files for libgssapi-krb5-2:amd64 (1.22.1-2) ... dpkg: warning: ignoring request to remove libhdf5-310 which is not installed dpkg: warning: ignoring request to remove libhdf5-hl-310 which is not installed dpkg: warning: ignoring request to remove libhts3t64 which is not installed dpkg: warning: ignoring request to remove libhtscodecs2 which is not installed dpkg: warning: ignoring request to remove libidn2-0 which is not installed dpkg: warning: ignoring request to remove libk5crypto3 which is not installed dpkg: warning: ignoring request to remove libkeyutils1 which is not installed dpkg: warning: ignoring request to remove libkrb5-3 which is not installed dpkg: warning: ignoring request to remove libkrb5support0 which is not installed dpkg: warning: ignoring request to remove liblapack3 which is not installed dpkg: warning: ignoring request to remove libldap2 which is not installed dpkg: warning: ignoring request to remove liblzf1 which is not installed dpkg: warning: ignoring request to remove libnghttp2-14 which is not installed dpkg: warning: ignoring request to remove libnghttp3-9 which is not installed dpkg: warning: ignoring request to remove libngtcp2-16 which is not installed dpkg: warning: ignoring request to remove libngtcp2-crypto-gnutls8 which is not installed dpkg: warning: ignoring request to remove libngtcp2-crypto-ossl0 which is not installed dpkg: warning: ignoring request to remove libp11-kit0 which is not installed dpkg: warning: ignoring request to remove libpsl5t64 which is not installed dpkg: warning: ignoring request to remove libpython3-stdlib which is not installed Purging configuration files for libpython3.13-minimal:amd64 (3.13.12-1) ... dpkg: warning: ignoring request to remove libpython3.13-stdlib which is not installed dpkg: warning: ignoring request to remove libqhull-r8.0 which is not installed Purging configuration files for libreadline8t64:amd64 (8.3-3+b1) ... dpkg: warning: ignoring request to remove librtmp1 which is not installed dpkg: warning: ignoring request to remove libsasl2-2 which is not installed dpkg: warning: ignoring request to remove libsasl2-modules-db which is not installed dpkg: warning: ignoring request to remove libsqlite3-0 which is not installed dpkg: warning: ignoring request to remove libssh2-1t64 which is not installed dpkg: warning: ignoring request to remove libsz2 which is not installed dpkg: warning: ignoring request to remove libtasn1-6 which is not installed dpkg: warning: ignoring request to remove libunistring5 which is not installed Purging configuration files for media-types (14.0.0) ... Purging configuration files for netbase (6.5) ... Purging configuration files for openssl (3.5.5-1) ... Purging configuration files for python3 (3.13.9-3) ... dpkg: warning: ignoring request to remove python3-attr which is not installed dpkg: warning: ignoring request to remove python3-certifi which is not installed dpkg: warning: ignoring request to remove python3-chardet which is not installed dpkg: warning: ignoring request to remove python3-charset-normalizer which is not installed dpkg: warning: ignoring request to remove python3-dateutil which is not installed dpkg: warning: ignoring request to remove python3-decorator which is not installed dpkg: warning: ignoring request to remove python3-fastjsonschema which is not installed dpkg: warning: ignoring request to remove python3-h5py which is not installed dpkg: warning: ignoring request to remove python3-h5py-serial which is not installed dpkg: warning: ignoring request to remove python3-idna which is not installed dpkg: warning: ignoring request to remove python3-jinja2 which is not installed Purging configuration files for python3-jsonschema (4.25.1-2) ... dpkg: warning: ignoring request to remove python3-jsonschema-specifications which is not installed dpkg: warning: ignoring request to remove python3-jupyter-core which is not installed dpkg: warning: ignoring request to remove python3-markupsafe which is not installed dpkg: warning: ignoring request to remove python3-minimal which is not installed dpkg: warning: ignoring request to remove python3-nbformat which is not installed Purging configuration files for python3-numpy (1:2.3.5+ds-3) ... dpkg: warning: ignoring request to remove python3-numpy-dev which is not installed dpkg: warning: ignoring request to remove python3-pandas which is not installed dpkg: warning: ignoring request to remove python3-pandas-lib which is not installed dpkg: warning: ignoring request to remove python3-platformdirs which is not installed dpkg: warning: ignoring request to remove python3-plotly which is not installed dpkg: warning: ignoring request to remove python3-pysam which is not installed dpkg: warning: ignoring request to remove python3-pytz which is not installed dpkg: warning: ignoring request to remove python3-referencing which is not installed dpkg: warning: ignoring request to remove python3-requests which is not installed dpkg: warning: ignoring request to remove python3-rpds-py which is not installed dpkg: warning: ignoring request to remove python3-scipy which is not installed dpkg: warning: ignoring request to remove python3-tenacity which is not installed dpkg: warning: ignoring request to remove python3-tqdm which is not installed dpkg: warning: ignoring request to remove python3-traitlets which is not installed dpkg: warning: ignoring request to remove python3-urllib3 which is not installed dpkg: warning: ignoring request to remove python3.13 which is not installed Purging configuration files for python3.13-minimal (3.13.12-1) ... Purging configuration files for readline-common (8.3-3) ... 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--purge', 'ca-certificates', 'libblas3:amd64', 'libbrotli1:amd64', 'libcom-err2:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'libgnutls30t64:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-310:amd64', 'libhdf5-hl-310:amd64', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libidn2-0:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'liblzf1:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libp11-kit0:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libsz2:amd64', 'libtasn1-6:amd64', 'libunistring5:amd64', 'media-types', 'netbase', 'openssl', 'python3', 'python3-attr', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-dateutil', 'python3-decorator', 'python3-fastjsonschema', 'python3-h5py', 'python3-h5py-serial', 'python3-idna', 'python3-jinja2', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-markupsafe', 'python3-minimal', 'python3-nbformat', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-platformdirs', 'python3-plotly', 'python3-pysam', 'python3-pytz', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-scipy', 'python3-tenacity', 'python3-tqdm', 'python3-traitlets', 'python3-urllib3', 'python3.13', 'python3.13-minimal', 'readline-common'] 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--purge', 'pycoqc'] 1m4.1s DUMP: dpkg: warning: ignoring request to remove pycoqc which is not installed 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--purge', 'pycoqc'] 1m4.1s INFO: Running scripts post_purge 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_purge_exceptions'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_purge_exceptions'] 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_purge_manual_cleanup'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_purge_manual_cleanup'] 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--purge', '--pending'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--purge', '--pending'] 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--remove', '--pending'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg', '--remove', '--pending'] 1m4.1s INFO: Running scripts post_test 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_test_exceptions'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'tmp/scripts/post_test_exceptions'] 1m4.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 1m4.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 1m5.0s DEBUG: No broken symlinks as far as we can find. 1m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-divert', '--list'] 1m5.0s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 1m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'dpkg-divert', '--list'] 1m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'clean'] 1m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t', 'apt-get', 'clean'] 1m5.0s DEBUG: Recording chroot state 1m6.9s INFO: PASS: Installation and purging test. 1m7.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/shm'] 1m7.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/shm'] 1m7.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/console'] 1m7.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/console'] 1m7.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/ptmx'] 1m7.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/ptmx'] 1m7.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/pts'] 1m7.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/dev/pts'] 1m7.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/proc'] 1m7.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t/proc'] 1m7.4s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 1m7.4s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp9pnbi08t'] 1m7.4s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp9pnbi08t 1m7.4s INFO: PASS: All tests. 1m7.4s INFO: piuparts run ends. ret=0 End: 2026-02-06 04:23:17 GMT