Start: 2025-04-09 10:36:10 GMT
Package: python3-mp-api
Source: python-mp-api
Version: 0.45.3-4
Installed-Size: 382
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Architecture: all
Depends: python3-maggma, python3-pymongo, python3-emmet-core (>= 0.54.0~), python3-monty (>= 2021.3.12~), python3-msgpack, python3-pkg-resources, python3-pymatgen (>= 2022.3.7~), python3-requests (>= 2.23.0~), python3-smart-open, python3-typing-extensions (>= 3.7.4.1~), python3:any
Description: Materials Project API for Python
Homepage: https://github.com/materialsproject/api
Description-md5: 2e488f276512b2f52480f676e6cf7568
Section: python
Priority: optional
Filename: pool/main/p/python-mp-api/python3-mp-api_0.45.3-4_all.deb
Size: 48848
MD5sum: 0c681eaa212eb6a49fc36ccc98b9f5d5
SHA256: 150140e180a9b0f6e6b9ff61a62e797e88d55ba80bcece0303b0d4a81cd8892f
Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt python3-mp-api=0.45.3-4
0m0.0s INFO: ------------------------------------------------------------------------------
0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile.
0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ
0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong.
0m0.0s INFO: ------------------------------------------------------------------------------
0m0.0s INFO: piuparts version 1.5.2~202503162239~1.5.1-10-g345d5865 starting up.
0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt python3-mp-api=0.45.3-4
0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-34-amd64 #1 SMP Debian 5.10.234-1 (2025-02-24) x86_64
0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpobmavas9
0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpobmavas9
0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpobmavas9', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz']
0m0.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpobmavas9', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz']
0m0.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpobmavas9/proc']
0m0.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpobmavas9/proc']
0m0.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/pts']
0m0.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/pts']
0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/ptmx']
0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/ptmx']
0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/console']
0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/console']
0m0.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/shm']
0m0.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/shm']
0m0.2s DEBUG: sources.list:
deb http://deb.debian.org/debian/ sid main
0m0.2s DEBUG: Created policy-rc.d and chmodded it.
0m0.2s DEBUG: Created resolv.conf.
0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpobmavas9/tmp/scripts/
0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts-leftovers to /srv/piuparts.debian.org/tmp/tmpobmavas9/tmp/scripts/
0m0.2s INFO: Running scripts post_chroot_unpack
0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated']
0m0.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated']
0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'update']
0m2.1s DUMP:
Get:1 http://deb.debian.org/debian sid InRelease [205 kB]
Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.2 MB]
Get:3 http://deb.debian.org/debian sid/main Translation-en [7416 kB]
Fetched 17.8 MB in 1s (12.5 MB/s)
Reading package lists...
0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'update']
0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-yf', 'dist-upgrade']
0m2.8s DUMP:
Reading package lists...
Building dependency tree...
Calculating upgrade...
The following packages will be upgraded:
libssl3t64 openssl-provider-legacy
2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 2739 kB of archives.
After this operation, 645 kB of additional disk space will be used.
Get:1 http://deb.debian.org/debian sid/main amd64 openssl-provider-legacy amd64 3.5.0-1 [307 kB]
Get:2 http://deb.debian.org/debian sid/main amd64 libssl3t64 amd64 3.5.0-1 [2432 kB]
Fetched 2739 kB in 0s (33.8 MB/s)
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Preparing to unpack .../openssl-provider-legacy_3.5.0-1_amd64.deb ...
Unpacking openssl-provider-legacy (3.5.0-1) over (3.4.1-1) ...
Setting up openssl-provider-legacy (3.5.0-1) ...
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Preparing to unpack .../libssl3t64_3.5.0-1_amd64.deb ...
Unpacking libssl3t64:amd64 (3.5.0-1) over (3.4.1-1) ...
Setting up libssl3t64:amd64 (3.5.0-1) ...
Processing triggers for libc-bin (2.41-6) ...
0m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-yf', 'dist-upgrade']
0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'sh', '-c', 'apt-cache dumpavail | md5sum']
0m3.0s DUMP:
18b305595815f83b09c2fe784f2b4851 -
0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'sh', '-c', 'apt-cache dumpavail | md5sum']
0m3.0s INFO: Running scripts post_setup
0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_dummy_users']
0m3.4s DUMP:
useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999
useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999
useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999
useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999
useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999
useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999
useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999
useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999
useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999
useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999
useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999
0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_dummy_users']
0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_fake-essential']
0m4.2s DUMP:
*** Adding fake essential packages ***
Reading package lists...
Building dependency tree...
Reading state information...
init-system-helpers is already the newest version (1.68).
The following additional packages will be installed:
libncursesw6 libproc2-0 libtext-charwidth-perl libtext-wrapi18n-perl procps
sensible-utils ucf
Suggested packages:
dbconfig-mysql | dbconfig-pgsql | dbconfig-sqlite3 | dbconfig-no-thanks
Recommended packages:
libgpm2 psmisc linux-sysctl-defaults
The following NEW packages will be installed:
dbconfig-common libncursesw6 libproc2-0 libtext-charwidth-perl
libtext-wrapi18n-perl procps sensible-utils ucf
0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded.
Need to get 1757 kB of archives.
After this operation, 4947 kB of additional disk space will be used.
Get:1 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.5+20250216-2 [135 kB]
Get:2 http://deb.debian.org/debian sid/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB]
Get:3 http://deb.debian.org/debian sid/main amd64 procps amd64 2:4.0.4-7 [878 kB]
Get:4 http://deb.debian.org/debian sid/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get:5 http://deb.debian.org/debian sid/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B]
Get:6 http://deb.debian.org/debian sid/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B]
Get:7 http://deb.debian.org/debian sid/main amd64 ucf all 3.0051 [42.8 kB]
Get:8 http://deb.debian.org/debian sid/main amd64 dbconfig-common all 2.0.24 [592 kB]
Preconfiguring packages ...
Fetched 1757 kB in 0s (23.4 MB/s)
Selecting previously unselected package libncursesw6:amd64.
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(Reading database ... 4926 files and directories currently installed.)
Preparing to unpack .../0-libncursesw6_6.5+20250216-2_amd64.deb ...
Unpacking libncursesw6:amd64 (6.5+20250216-2) ...
Selecting previously unselected package libproc2-0:amd64.
Preparing to unpack .../1-libproc2-0_2%3a4.0.4-7_amd64.deb ...
Unpacking libproc2-0:amd64 (2:4.0.4-7) ...
Selecting previously unselected package procps.
Preparing to unpack .../2-procps_2%3a4.0.4-7_amd64.deb ...
Unpacking procps (2:4.0.4-7) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../3-sensible-utils_0.0.24_all.deb ...
Unpacking sensible-utils (0.0.24) ...
Selecting previously unselected package libtext-charwidth-perl:amd64.
Preparing to unpack .../4-libtext-charwidth-perl_0.04-11+b4_amd64.deb ...
Unpacking libtext-charwidth-perl:amd64 (0.04-11+b4) ...
Selecting previously unselected package libtext-wrapi18n-perl.
Preparing to unpack .../5-libtext-wrapi18n-perl_0.06-10_all.deb ...
Unpacking libtext-wrapi18n-perl (0.06-10) ...
Selecting previously unselected package ucf.
Preparing to unpack .../6-ucf_3.0051_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0051) ...
Selecting previously unselected package dbconfig-common.
Preparing to unpack .../7-dbconfig-common_2.0.24_all.deb ...
Unpacking dbconfig-common (2.0.24) ...
Setting up libtext-charwidth-perl:amd64 (0.04-11+b4) ...
Setting up libtext-wrapi18n-perl (0.06-10) ...
Setting up libproc2-0:amd64 (2:4.0.4-7) ...
Setting up libncursesw6:amd64 (6.5+20250216-2) ...
Setting up sensible-utils (0.0.24) ...
Setting up procps (2:4.0.4-7) ...
Setting up ucf (3.0051) ...
Setting up dbconfig-common (2.0.24) ...
Creating config file /etc/dbconfig-common/config with new version
Processing triggers for libc-bin (2.41-6) ...
0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_fake-essential']
0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_forbid_home']
0m4.2s DUMP:
Disabling /home
Adding 'local diversion of /home to /home.distrib'
0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_forbid_home']
0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_force-unsafe-io']
0m4.2s DUMP:
Enabling dpkg --force-unsafe-io.
Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib'
Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged'
'/bin/sync' -> 'true'
0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_force-unsafe-io']
0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_minimize']
0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_minimize']
0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_squeeze-backports']
0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_squeeze-backports']
0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_zz_backports']
0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_setup_zz_backports']
0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'clean']
0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'clean']
0m4.2s DEBUG: Recording chroot state
0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
0m4.5s DUMP:
install ok installed apt apt 3.0.0
install ok installed base-files base-files 13.7
install ok installed base-passwd base-passwd 3.6.7
install ok installed bash bash 5.2.37-1.1+b2
install ok installed bsdutils bsdutils 1:2.41-3
install ok installed coreutils coreutils 9.6-2
install ok installed dash dash 0.5.12-12
install ok installed dbconfig-common dbconfig-common 2.0.24
install ok installed debconf debconf 1.5.91
install ok installed debian-archive-keyring debian-archive-keyring 2023.4
install ok installed debianutils debianutils 5.21
install ok installed diffutils diffutils 1:3.10-3
install ok installed dpkg dpkg 1.22.18
install ok installed findutils findutils 4.10.0-3
install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-19
install ok installed grep grep 3.11-4
install ok installed gzip gzip 1.13-1
install ok installed hostname hostname 3.25
install ok installed init-system-helpers init-system-helpers 1.68
install ok installed libacl1:amd64 libacl1 2.3.2-2+b1
install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.0.0
install ok installed libattr1:amd64 libattr1 1:2.5.2-3
install ok installed libaudit-common libaudit-common 1:4.0.2-2
install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2+b2
install ok installed libblkid1:amd64 libblkid1 2.41-3
install ok installed libbsd0:amd64 libbsd0 0.12.2-2
install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6
install ok installed libc-bin libc-bin 2.41-6
install ok installed libc6:amd64 libc6 2.41-6
install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4+b1
install ok installed libcap2:amd64 libcap2 1:2.75-4
install ok installed libcrypt1:amd64 libcrypt1 1:4.4.38-1
install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9
install ok installed libdebconfclient0:amd64 libdebconfclient0 0.278
install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-19
install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3
install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.1-1
install ok installed liblastlog2-2:amd64 liblastlog2-2 2.41-3
install ok installed liblz4-1:amd64 liblz4-1 1.10.0-4
install ok installed liblzma5:amd64 liblzma5 5.8.1-1
install ok installed libmd0:amd64 libmd0 1.1.0-2+b1
install ok installed libmount1:amd64 libmount1 2.41-3
install ok installed libncursesw6:amd64 libncursesw6 6.5+20250216-2
install ok installed libnettle8t64:amd64 libnettle8t64 3.10.1-1
install ok installed libpam-modules:amd64 libpam-modules 1.7.0-3
install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-3
install ok installed libpam-runtime libpam-runtime 1.7.0-3
install ok installed libpam0g:amd64 libpam0g 1.7.0-3
install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.45-1
install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-7
install ok installed libseccomp2:amd64 libseccomp2 2.6.0-2
install ok installed libselinux1:amd64 libselinux1 3.8.1-1
install ok installed libsemanage-common libsemanage-common 3.8.1-1
install ok installed libsemanage2:amd64 libsemanage2 3.8.1-1
install ok installed libsepol2:amd64 libsepol2 3.8.1-1
install ok installed libsmartcols1:amd64 libsmartcols1 2.41-3
install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-2
install ok installed libssl3t64:amd64 libssl3t64 3.5.0-1
install ok installed libstdc++6:amd64 libstdc++6 14.2.0-19
install ok installed libsystemd0:amd64 libsystemd0 257.5-2
install ok installed libtext-charwidth-perl:amd64 libtext-charwidth-perl 0.04-11+b4
install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-10
install ok installed libtinfo6:amd64 libtinfo6 6.5+20250216-2
install ok installed libudev1:amd64 libudev1 257.5-2
install ok installed libuuid1:amd64 libuuid1 2.41-3
install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2
install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-1
install ok installed login login 1:4.16.0-2+really2.41-3
install ok installed login.defs login.defs 1:4.17.4-1
install ok installed mawk mawk 1.3.4.20250131-1
install ok installed mount mount 2.41-3
install ok installed ncurses-base ncurses-base 6.5+20250216-2
install ok installed ncurses-bin ncurses-bin 6.5+20250216-2
install ok installed openssl-provider-legacy openssl-provider-legacy 3.5.0-1
install ok installed passwd passwd 1:4.17.4-1
install ok installed perl-base perl-base 5.40.1-2
install ok installed procps procps 2:4.0.4-7
install ok installed sed sed 4.9-2
install ok installed sensible-utils sensible-utils 0.0.24
install ok installed sqv sqv 1.3.0-1
install ok installed sysvinit-utils sysvinit-utils 3.14-4
install ok installed tar tar 1.35+dfsg-3.1
install ok installed tzdata tzdata 2025b-1
install ok installed ucf ucf 3.0051
install ok installed usr-is-merged usr-is-merged 39+nmu2
install ok installed util-linux util-linux 2.41-3
install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1
0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-divert', '--list']
0m4.5s DUMP:
local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged
local diversion of /home to /home.distrib
diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6
diversion of /libx32 to /.libx32.usr-is-merged by base-files
local diversion of /usr/bin/sync to /usr/bin/sync.distrib
diversion of /lib32 to /.lib32.usr-is-merged by base-files
diversion of /libo32 to /.libo32.usr-is-merged by base-files
0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-divert', '--list']
0m4.5s INFO: Running scripts is_testable
0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/is_testable_uninstallable']
0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/is_testable_uninstallable']
0m4.5s INFO: apt-cache does not know about any of the requested packages
0m4.5s INFO: Running scripts pre_test
0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_test_exceptions']
0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_test_exceptions']
0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_test_root_password']
0m4.5s DUMP:
New password: Retype new password: passwd: password updated successfully
0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_test_root_password']
0m4.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
0m4.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
0m5.0s DEBUG: No broken symlinks as far as we can find.
0m5.0s INFO: Running scripts pre_install
0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_database-server']
0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_database-server']
0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_exceptions']
0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_exceptions']
0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_extras']
0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_extras']
0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture']
0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture']
0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'show', '--no-all-versions', 'python3-mp-api=0.45.3-4']
0m5.5s DUMP:
Package: python3-mp-api
Source: python-mp-api
Version: 0.45.3-4
Installed-Size: 382
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Architecture: all
Depends: python3-maggma, python3-pymongo, python3-emmet-core (>= 0.54.0~), python3-monty (>= 2021.3.12~), python3-msgpack, python3-pkg-resources, python3-pymatgen (>= 2022.3.7~), python3-requests (>= 2.23.0~), python3-smart-open, python3-typing-extensions (>= 3.7.4.1~), python3:any
Description-en: Materials Project API for Python
The Materials Project API defines a standardized manner in which the
Materials Project database can be accessed by its users. The API is
typically used by scientific researchers who need to retrieve large
amounts of data to support their research.
.
This package installs the library for Python 3.
Description-md5: 2e488f276512b2f52480f676e6cf7568
Homepage: https://github.com/materialsproject/api
Section: python
Priority: optional
Filename: pool/main/p/python-mp-api/python3-mp-api_0.45.3-4_all.deb
Size: 48848
MD5sum: 0c681eaa212eb6a49fc36ccc98b9f5d5
SHA256: 150140e180a9b0f6e6b9ff61a62e797e88d55ba80bcece0303b0d4a81cd8892f
0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'show', '--no-all-versions', 'python3-mp-api=0.45.3-4']
0m5.5s DEBUG: metapackage:
Package: piuparts-depends-dummy
Version: 0.invalid.0
Architecture: all
Maintainer: piuparts developers team <piuparts-devel@alioth-lists.debian.net>
Depends: python3-maggma, python3-pymongo, python3-emmet-core (>= 0.54.0~), python3-monty (>= 2021.3.12~), python3-msgpack, python3-pkg-resources, python3-pymatgen (>= 2022.3.7~), python3-requests (>= 2.23.0~), python3-smart-open, python3-typing-extensions (>= 3.7.4.1~), python3:any
Description: Dummy package to satisfy dependencies - created by piuparts
This package was created automatically by piuparts and can safely be removed
0m5.5s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpoqlq_pgz/piuparts-depends-dummy']
0m5.5s DUMP:
dpkg-deb: warning: not checking contents of control area
dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmpoqlq_pgz/piuparts-depends-dummy.deb'.
0m5.5s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpoqlq_pgz/piuparts-depends-dummy']
0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt']
0m5.5s DUMP:
3.0.0
0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt']
0m5.5s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmpoqlq_pgz/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmpobmavas9/tmp
0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb']
0m42.1s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
blt ca-certificates fontconfig-config fonts-dejavu-core fonts-dejavu-mono
fonts-lyx libatomic1 libblas3 libboost-iostreams1.83.0 libbrotli1 libcairo2
libcom-err2 libdeflate0 libexpat1 libffi8 libfontconfig1 libfreetype6
libfribidi0 libgcrypt20 libgfortran5 libglib2.0-0t64 libgomp1 libgpg-error0
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libimagequant0 libinchi1.07
libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 liblerc4
libmaeparser1 libnorm1t64 libopenbabel7 libopenjp2-7 libopenmm-dev
libopenmm8.1 libpgm-5.3-0t64 libpixman-1-0 libpng16-16t64 libpython3-stdlib
libpython3.13 libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0
libraqm0 libreadline8t64 libsharpyuv0 libsodium23 libsymspg2 libtcl8.6
libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
libxml2 libxrender1 libxslt1.1 libxss1 libyaml-0-2 libzmq5 libzopfli1
media-types netbase openssl python-matplotlib-data python3
python3-aioitertools python3-annotated-types python3-attr
python3-autocommand python3-bcrypt python3-boto3 python3-botocore
python3-brotli python3-bson python3-certifi python3-cffi-backend
python3-chardet python3-charset-normalizer python3-contourpy
python3-cryptography python3-custodian python3-cycler python3-dateutil
python3-decorator python3-dnspython python3-dotenv python3-email-validator
python3-emmet-core python3-fastjsonschema python3-fonttools python3-fs
python3-idna python3-inflect python3-jaraco.context python3-jaraco.functools
python3-jmespath python3-joblib python3-jsonlines python3-jsonschema
python3-jsonschema-specifications python3-jupyter-core python3-kiwisolver
python3-latexcodec python3-lxml python3-lz4 python3-maggma
python3-matplotlib python3-minimal python3-mongomock python3-monty
python3-more-itertools python3-mpmath python3-msgpack python3-nacl
python3-nbformat python3-networkx python3-numpy python3-numpy-dev
python3-openbabel python3-openmm python3-orjson python3-packaging
python3-palettable python3-pandas python3-pandas-lib python3-paramiko
python3-pil python3-pil.imagetk python3-pkg-resources python3-platformdirs
python3-plotly python3-psutil python3-pybtex python3-pydantic
python3-pydantic-core python3-pydantic-settings python3-pydash
python3-pymatgen python3-pymongo python3-pyparsing python3-pytz
python3-referencing python3-requests python3-rpds-py python3-ruamel.yaml
python3-ruamel.yaml.clib python3-s3transfer python3-scipy python3-sentinels
python3-sentry-sdk python3-six python3-smart-open python3-spglib
python3-sshtunnel python3-sympy python3-tabulate python3-tenacity python3-tk
python3-tqdm python3-traitlets python3-typeguard python3-typing-extensions
python3-tz python3-ufolib2 python3-uncertainties python3-unicodedata2
python3-urllib3 python3-wrapt python3-yaml python3-zmq python3-zopfli
python3.13 python3.13-minimal python3.13-tk readline-common tk8.6-blt2.5
unicode-data x11-common
Suggested packages:
blt-demo rng-tools low-memory-monitor krb5-doc krb5-user
libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 python3-doc python3-venv
python-attr-doc python-charset-normalizer-doc python-cryptography-doc
python3-cryptography-vectors python-custodian-doc python-cycler-doc
python3-trio python3-aioquic python-fastjsonschema-doc python-joblib-doc
python-jsonschema-doc python-jupyter-core-doc python3-pip
python-latexcodec-doc python-lxml-doc cm-super-minimal dvipng ffmpeg
fonts-staypuft ghostscript gir1.2-gtk-3.0 gir1.2-gtk-4.0 inkscape ipython3
librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi
python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado
texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2
python-nacl-doc gcc gfortran python-numpy-doc python3-dev python3-pytest
python-pandas-doc python3-statsmodels python3-gssapi python-pil-doc
python3-setuptools python3-ipykernel python-pybtex-doc python-pymatgen-doc
python3-mp-api python-pymongo-doc python-pyparsing-doc python3-openssl
python3-socks python-requests-doc python-scipy-doc python3-azure
python3-azure-storage texlive-fonts-extra python-sympy-doc
python-tenacity-doc tix python3-tk-dbg python-traitlets-doc
python-uncertainties-doc python3.13-venv python3.13-doc binutils
binfmt-support readline-doc
Recommended packages:
libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n
javascript-common krb5-locales python3-bson-ext python3-h2 python3-httpcore
python3-httpx python3-pytest python3-fqdn python3-isoduration
python3-json-pointer python3-rfc3339-validator python3-rfc3986-validator
python3-rfc3987 python3-uritemplate python3-webcolors python3-bs4
python3-cssselect python3-html5lib python-monty-doc python3-torch
python3-gdal python3-pydot python3-pygraphviz python3-bottleneck
python3-numexpr python3-odf python3-openpyxl python3-tables python3-jinja2
python3-numba python3-invoke python3-olefile python3-tomli python3-ase
python3-vtk9 | python3-paraview python3-gridfs python3-pymongo-ext g++
| c++-compiler python3-pooch python3-zstandard isympy-common
The following NEW packages will be installed:
blt ca-certificates fontconfig-config fonts-dejavu-core fonts-dejavu-mono
fonts-lyx libatomic1 libblas3 libboost-iostreams1.83.0 libbrotli1 libcairo2
libcom-err2 libdeflate0 libexpat1 libffi8 libfontconfig1 libfreetype6
libfribidi0 libgcrypt20 libgfortran5 libglib2.0-0t64 libgomp1 libgpg-error0
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libimagequant0 libinchi1.07
libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 liblerc4
libmaeparser1 libnorm1t64 libopenbabel7 libopenjp2-7 libopenmm-dev
libopenmm8.1 libpgm-5.3-0t64 libpixman-1-0 libpng16-16t64 libpython3-stdlib
libpython3.13 libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0
libraqm0 libreadline8t64 libsharpyuv0 libsodium23 libsymspg2 libtcl8.6
libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
libxml2 libxrender1 libxslt1.1 libxss1 libyaml-0-2 libzmq5 libzopfli1
media-types netbase openssl piuparts-depends-dummy python-matplotlib-data
python3 python3-aioitertools python3-annotated-types python3-attr
python3-autocommand python3-bcrypt python3-boto3 python3-botocore
python3-brotli python3-bson python3-certifi python3-cffi-backend
python3-chardet python3-charset-normalizer python3-contourpy
python3-cryptography python3-custodian python3-cycler python3-dateutil
python3-decorator python3-dnspython python3-dotenv python3-email-validator
python3-emmet-core python3-fastjsonschema python3-fonttools python3-fs
python3-idna python3-inflect python3-jaraco.context python3-jaraco.functools
python3-jmespath python3-joblib python3-jsonlines python3-jsonschema
python3-jsonschema-specifications python3-jupyter-core python3-kiwisolver
python3-latexcodec python3-lxml python3-lz4 python3-maggma
python3-matplotlib python3-minimal python3-mongomock python3-monty
python3-more-itertools python3-mpmath python3-msgpack python3-nacl
python3-nbformat python3-networkx python3-numpy python3-numpy-dev
python3-openbabel python3-openmm python3-orjson python3-packaging
python3-palettable python3-pandas python3-pandas-lib python3-paramiko
python3-pil python3-pil.imagetk python3-pkg-resources python3-platformdirs
python3-plotly python3-psutil python3-pybtex python3-pydantic
python3-pydantic-core python3-pydantic-settings python3-pydash
python3-pymatgen python3-pymongo python3-pyparsing python3-pytz
python3-referencing python3-requests python3-rpds-py python3-ruamel.yaml
python3-ruamel.yaml.clib python3-s3transfer python3-scipy python3-sentinels
python3-sentry-sdk python3-six python3-smart-open python3-spglib
python3-sshtunnel python3-sympy python3-tabulate python3-tenacity python3-tk
python3-tqdm python3-traitlets python3-typeguard python3-typing-extensions
python3-tz python3-ufolib2 python3-uncertainties python3-unicodedata2
python3-urllib3 python3-wrapt python3-yaml python3-zmq python3-zopfli
python3.13 python3.13-minimal python3.13-tk readline-common tk8.6-blt2.5
unicode-data x11-common
0 upgraded, 199 newly installed, 0 to remove and 0 not upgraded.
Need to get 151 MB/151 MB of archives.
After this operation, 808 MB of additional disk space will be used.
Get:1 /tmp/piuparts-depends-dummy.deb piuparts-depends-dummy all 0.invalid.0 [754 B]
Get:2 http://deb.debian.org/debian sid/main amd64 libpython3.13-minimal amd64 3.13.3-1 [861 kB]
Get:3 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.7.1-1 [108 kB]
Get:4 http://deb.debian.org/debian sid/main amd64 python3.13-minimal amd64 3.13.3-1 [2210 kB]
Get:5 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.13.2-2 [27.1 kB]
Get:6 http://deb.debian.org/debian sid/main amd64 media-types all 13.0.0 [29.3 kB]
Get:7 http://deb.debian.org/debian sid/main amd64 netbase all 6.5 [12.4 kB]
Get:8 http://deb.debian.org/debian sid/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get:9 http://deb.debian.org/debian sid/main amd64 readline-common all 8.2-6 [69.4 kB]
Get:10 http://deb.debian.org/debian sid/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get:11 http://deb.debian.org/debian sid/main amd64 libpython3.13-stdlib amd64 3.13.3-1 [1954 kB]
Get:12 http://deb.debian.org/debian sid/main amd64 python3.13 amd64 3.13.3-1 [751 kB]
Get:13 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.1 kB]
Get:14 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.13.2-2 [28.1 kB]
Get:15 http://deb.debian.org/debian sid/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1 [139 kB]
Get:16 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.12.1-2 [160 kB]
Get:17 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14.2.0-19 [836 kB]
Get:18 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.12.1-2 [2452 kB]
Get:19 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:2.2.4+ds-1 [5096 kB]
Get:20 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.5.0-1 [1491 kB]
Get:21 http://deb.debian.org/debian sid/main amd64 ca-certificates all 20241223 [164 kB]
Get:22 http://deb.debian.org/debian sid/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1042 kB]
Get:23 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB]
Get:24 http://deb.debian.org/debian sid/main amd64 libpng16-16t64 amd64 1.6.47-1.1 [282 kB]
Get:25 http://deb.debian.org/debian sid/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB]
Get:26 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get:27 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get:28 http://deb.debian.org/debian sid/main amd64 fontconfig-config amd64 2.15.0-2.3 [318 kB]
Get:29 http://deb.debian.org/debian sid/main amd64 libfontconfig1 amd64 2.15.0-2.3 [392 kB]
Get:30 http://deb.debian.org/debian sid/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB]
Get:31 http://deb.debian.org/debian sid/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB]
Get:32 http://deb.debian.org/debian sid/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB]
Get:33 http://deb.debian.org/debian sid/main amd64 libx11-data all 2:1.8.12-1 [343 kB]
Get:34 http://deb.debian.org/debian sid/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB]
Get:35 http://deb.debian.org/debian sid/main amd64 libxrender1 amd64 1:0.9.12-1 [27.9 kB]
Get:36 http://deb.debian.org/debian sid/main amd64 libxft2 amd64 2.3.6-1+b4 [54.5 kB]
Get:37 http://deb.debian.org/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB]
Get:38 http://deb.debian.org/debian sid/main amd64 x11-common all 1:7.7+24 [217 kB]
Get:39 http://deb.debian.org/debian sid/main amd64 libxss1 amd64 1:1.2.3-1+b3 [17.0 kB]
Get:40 http://deb.debian.org/debian sid/main amd64 libtk8.6 amd64 8.6.16-1 [793 kB]
Get:41 http://deb.debian.org/debian sid/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-8 [591 kB]
Get:42 http://deb.debian.org/debian sid/main amd64 blt amd64 2.5.3+dfsg-8 [5984 B]
Get:43 http://deb.debian.org/debian sid/main amd64 fonts-lyx all 2.4.3-1 [190 kB]
Get:44 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 14.2.0-19 [9308 B]
Get:45 http://deb.debian.org/debian sid/main amd64 libboost-iostreams1.83.0 amd64 1.83.0-4.2 [254 kB]
Get:46 http://deb.debian.org/debian sid/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB]
Get:47 http://deb.debian.org/debian sid/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB]
Get:48 http://deb.debian.org/debian sid/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB]
Get:49 http://deb.debian.org/debian sid/main amd64 libcairo2 amd64 1.18.4-1+b1 [538 kB]
Get:50 http://deb.debian.org/debian sid/main amd64 libcom-err2 amd64 1.47.2-1+b1 [24.3 kB]
Get:51 http://deb.debian.org/debian sid/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB]
Get:52 http://deb.debian.org/debian sid/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB]
Get:53 http://deb.debian.org/debian sid/main amd64 libgpg-error0 amd64 1.51-4 [82.1 kB]
Get:54 http://deb.debian.org/debian sid/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB]
Get:55 http://deb.debian.org/debian sid/main amd64 libglib2.0-0t64 amd64 2.84.1-1 [1514 kB]
Get:56 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 14.2.0-19 [137 kB]
Get:57 http://deb.debian.org/debian sid/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB]
Get:58 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB]
Get:59 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB]
Get:60 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-5 [9316 B]
Get:61 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB]
Get:62 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB]
Get:63 http://deb.debian.org/debian sid/main amd64 libharfbuzz0b amd64 10.2.0-1+b1 [479 kB]
Get:64 http://deb.debian.org/debian sid/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB]
Get:65 http://deb.debian.org/debian sid/main amd64 libinchi1.07 amd64 1.07.3+dfsg-1 [557 kB]
Get:66 http://deb.debian.org/debian sid/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB]
Get:67 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo amd64 1:2.1.5-3.1 [168 kB]
Get:68 http://deb.debian.org/debian sid/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:69 http://deb.debian.org/debian sid/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get:70 http://deb.debian.org/debian sid/main amd64 liblcms2-2 amd64 2.16-2 [160 kB]
Get:71 http://deb.debian.org/debian sid/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB]
Get:72 http://deb.debian.org/debian sid/main amd64 libmaeparser1 amd64 1.3.1-1+b2 [94.0 kB]
Get:73 http://deb.debian.org/debian sid/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1+b2 [221 kB]
Get:74 http://deb.debian.org/debian sid/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.4 [698 kB]
Get:75 http://deb.debian.org/debian sid/main amd64 libopenbabel7 amd64 3.1.1+dfsg-12 [3282 kB]
Get:76 http://deb.debian.org/debian sid/main amd64 libopenjp2-7 amd64 2.5.3-2 [204 kB]
Get:77 http://deb.debian.org/debian sid/main amd64 libopenmm8.1 amd64 8.1.2+dfsg-11 [1059 kB]
Get:78 http://deb.debian.org/debian sid/main amd64 libopenmm-dev amd64 8.1.2+dfsg-11 [346 kB]
Get:79 http://deb.debian.org/debian sid/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1+b1 [162 kB]
Get:80 http://deb.debian.org/debian sid/main amd64 libpython3.13 amd64 3.13.3-1 [2156 kB]
Get:81 http://deb.debian.org/debian sid/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB]
Get:82 http://deb.debian.org/debian sid/main amd64 libraqm0 amd64 0.10.2-1 [13.9 kB]
Get:83 http://deb.debian.org/debian sid/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB]
Get:84 http://deb.debian.org/debian sid/main amd64 libsodium23 amd64 1.0.18-1+b2 [165 kB]
Get:85 http://deb.debian.org/debian sid/main amd64 libsymspg2 amd64 2.6.0-1 [194 kB]
Get:86 http://deb.debian.org/debian sid/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB]
Get:87 http://deb.debian.org/debian sid/main amd64 libtiff6 amd64 4.7.0-3 [346 kB]
Get:88 http://deb.debian.org/debian sid/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB]
Get:89 http://deb.debian.org/debian sid/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB]
Get:90 http://deb.debian.org/debian sid/main amd64 libxslt1.1 amd64 1.1.35-1.2 [233 kB]
Get:91 http://deb.debian.org/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-2 [52.5 kB]
Get:92 http://deb.debian.org/debian sid/main amd64 libzmq5 amd64 4.3.5-1+b3 [283 kB]
Get:93 http://deb.debian.org/debian sid/main amd64 libzopfli1 amd64 1.0.3-3 [106 kB]
Get:94 http://deb.debian.org/debian sid/main amd64 python-matplotlib-data all 3.10.1+dfsg1-2 [2736 kB]
Get:95 http://deb.debian.org/debian sid/main amd64 python3-typing-extensions all 4.13.1-1 [90.2 kB]
Get:96 http://deb.debian.org/debian sid/main amd64 python3-aioitertools all 0.12.0-1 [20.6 kB]
Get:97 http://deb.debian.org/debian sid/main amd64 python3-annotated-types all 0.7.0-1 [18.8 kB]
Get:98 http://deb.debian.org/debian sid/main amd64 python3-attr all 25.3.0-1 [69.5 kB]
Get:99 http://deb.debian.org/debian sid/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:100 http://deb.debian.org/debian sid/main amd64 python3-bcrypt amd64 4.2.0-2.1+b1 [211 kB]
Get:101 http://deb.debian.org/debian sid/main amd64 python3-dateutil all 2.9.0-4 [79.4 kB]
Get:102 http://deb.debian.org/debian sid/main amd64 python3-jmespath all 1.0.1-1 [21.1 kB]
Get:103 http://deb.debian.org/debian sid/main amd64 python3-urllib3 all 2.3.0-2 [114 kB]
Get:104 http://deb.debian.org/debian sid/main amd64 python3-certifi all 2025.1.31+ds-1 [9652 B]
Get:105 http://deb.debian.org/debian sid/main amd64 python3-charset-normalizer amd64 3.4.1-1+b1 [125 kB]
Get:106 http://deb.debian.org/debian sid/main amd64 python3-idna all 3.10-1 [42.0 kB]
Get:107 http://deb.debian.org/debian sid/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB]
Get:108 http://deb.debian.org/debian sid/main amd64 python3-requests all 2.32.3+dfsg-5 [72.2 kB]
Get:109 http://deb.debian.org/debian sid/main amd64 python3-six all 1.17.0-1 [16.5 kB]
Get:110 http://deb.debian.org/debian sid/main amd64 python3-botocore all 1.37.9+repack-1 [7311 kB]
Get:111 http://deb.debian.org/debian sid/main amd64 python3-s3transfer all 0.11.4-1 [57.7 kB]
Get:112 http://deb.debian.org/debian sid/main amd64 python3-boto3 all 1.37.9-1 [339 kB]
Get:113 http://deb.debian.org/debian sid/main amd64 python3-brotli amd64 1.1.0-2+b7 [320 kB]
Get:114 http://deb.debian.org/debian sid/main amd64 python3-bson all 4.10.1-5 [87.1 kB]
Get:115 http://deb.debian.org/debian sid/main amd64 python3-cffi-backend amd64 1.17.1-2+b2 [93.6 kB]
Get:116 http://deb.debian.org/debian sid/main amd64 python3-contourpy amd64 1.3.1-1+b1 [216 kB]
Get:117 http://deb.debian.org/debian sid/main amd64 python3-cryptography amd64 43.0.0-2 [941 kB]
Get:118 http://deb.debian.org/debian sid/main amd64 python3-pytz all 2025.2-1 [151 kB]
Get:119 http://deb.debian.org/debian sid/main amd64 python3-pandas-lib amd64 2.2.3+dfsg-9 [4595 kB]
Get:120 http://deb.debian.org/debian sid/main amd64 python3-pandas all 2.2.3+dfsg-9 [3097 kB]
Get:121 http://deb.debian.org/debian sid/main amd64 python3-pydantic-core amd64 2.27.2-2 [1505 kB]
Get:122 http://deb.debian.org/debian sid/main amd64 python3-dnspython all 2.7.0-1 [164 kB]
Get:123 http://deb.debian.org/debian sid/main amd64 python3-email-validator all 2.2.0-1 [31.6 kB]
Get:124 http://deb.debian.org/debian sid/main amd64 python3-pydantic amd64 2.10.6-2 [346 kB]
Get:125 http://deb.debian.org/debian sid/main amd64 python3-tqdm all 4.67.1-3 [90.3 kB]
Get:126 http://deb.debian.org/debian sid/main amd64 python3-ruamel.yaml.clib amd64 0.2.12+ds-1+b1 [135 kB]
Get:127 http://deb.debian.org/debian sid/main amd64 python3-ruamel.yaml all 0.18.10+ds-1 [147 kB]
Get:128 http://deb.debian.org/debian sid/main amd64 python3-monty all 2025.3.3-1 [46.1 kB]
Get:129 http://deb.debian.org/debian sid/main amd64 python3-psutil amd64 7.0.0-1 [220 kB]
Get:130 http://deb.debian.org/debian sid/main amd64 python3-pil amd64 11.1.0-5+b1 [513 kB]
Get:131 http://deb.debian.org/debian sid/main amd64 python3.13-tk amd64 3.13.3-1 [107 kB]
Get:132 http://deb.debian.org/debian sid/main amd64 python3-tk amd64 3.13.3-1 [9548 B]
Get:133 http://deb.debian.org/debian sid/main amd64 python3-pil.imagetk amd64 11.1.0-5+b1 [81.6 kB]
Get:134 http://deb.debian.org/debian sid/main amd64 python3-pyparsing all 3.1.2-1 [146 kB]
Get:135 http://deb.debian.org/debian sid/main amd64 python3-cycler all 0.12.1-1 [9496 B]
Get:136 http://deb.debian.org/debian sid/main amd64 python3-platformdirs all 4.3.7-1 [16.6 kB]
Get:137 http://deb.debian.org/debian sid/main amd64 python3-fs all 2.4.16-7 [95.2 kB]
Get:138 http://deb.debian.org/debian sid/main amd64 python3-lxml amd64 5.3.1-1+b1 [1288 kB]
Get:139 http://deb.debian.org/debian sid/main amd64 python3-lz4 amd64 4.4.0+dfsg-2 [25.3 kB]
Get:140 http://deb.debian.org/debian sid/main amd64 python3-decorator all 5.2.1-1 [32.9 kB]
Get:141 http://deb.debian.org/debian sid/main amd64 python3-scipy amd64 1.15.2-7 [16.3 MB]
Get:142 http://deb.debian.org/debian sid/main amd64 python3-mpmath all 1.3.0-1 [419 kB]
Get:143 http://deb.debian.org/debian sid/main amd64 python3-sympy all 1.13.3-5 [4148 kB]
Get:144 http://deb.debian.org/debian sid/main amd64 python3-ufolib2 all 0.17.1+dfsg1-1 [33.0 kB]
Get:145 http://deb.debian.org/debian sid/main amd64 python3-unicodedata2 amd64 15.1.0+ds-1+b4 [299 kB]
Get:146 http://deb.debian.org/debian sid/main amd64 python3-zopfli amd64 0.2.3.post1-1+b1 [10.5 kB]
Get:147 http://deb.debian.org/debian sid/main amd64 unicode-data all 15.1.0-1 [8547 kB]
Get:148 http://deb.debian.org/debian sid/main amd64 python3-fonttools amd64 4.57.0-1 [1438 kB]
Get:149 http://deb.debian.org/debian sid/main amd64 python3-kiwisolver amd64 1.4.7-3+b1 [62.0 kB]
Get:150 http://deb.debian.org/debian sid/main amd64 python3-packaging all 24.2-1 [55.3 kB]
Get:151 http://deb.debian.org/debian sid/main amd64 python3-matplotlib amd64 3.10.1+dfsg1-2 [23.8 MB]
Get:152 http://deb.debian.org/debian sid/main amd64 python3-sentry-sdk all 2.18.0-1 [236 kB]
Get:153 http://deb.debian.org/debian sid/main amd64 python3-custodian all 2024.10.16-1 [95.9 kB]
Get:154 http://deb.debian.org/debian sid/main amd64 python3-dotenv all 1.0.1-1 [26.6 kB]
Get:155 http://deb.debian.org/debian sid/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB]
Get:156 http://deb.debian.org/debian sid/main amd64 python3-typeguard all 4.4.2-1 [37.3 kB]
Get:157 http://deb.debian.org/debian sid/main amd64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:158 http://deb.debian.org/debian sid/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B]
Get:159 http://deb.debian.org/debian sid/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get:160 http://deb.debian.org/debian sid/main amd64 python3-pkg-resources all 75.8.0-1 [222 kB]
Get:161 http://deb.debian.org/debian sid/main amd64 python3-latexcodec all 3.0.0-1 [17.5 kB]
Get:162 http://deb.debian.org/debian sid/main amd64 python3-yaml amd64 6.0.2-1+b2 [136 kB]
Get:163 http://deb.debian.org/debian sid/main amd64 python3-pybtex all 0.24.0-4 [74.6 kB]
Get:164 http://deb.debian.org/debian sid/main amd64 python3-pydantic-settings all 2.8.1-2 [45.0 kB]
Get:165 http://deb.debian.org/debian sid/main amd64 python3-joblib all 1.4.2-3 [216 kB]
Get:166 http://deb.debian.org/debian sid/main amd64 python3-networkx all 3.2.1-5 [13.0 MB]
Get:167 http://deb.debian.org/debian sid/main amd64 python3-palettable all 3.3.3-1 [69.7 kB]
Get:168 http://deb.debian.org/debian sid/main amd64 python3-tz all 2025.2-1 [4072 B]
Get:169 http://deb.debian.org/debian sid/main amd64 python3-fastjsonschema all 2.21.1-1 [22.4 kB]
Get:170 http://deb.debian.org/debian sid/main amd64 python3-rpds-py amd64 0.21.0-2+b1 [257 kB]
Get:171 http://deb.debian.org/debian sid/main amd64 python3-referencing all 0.36.2-1 [23.7 kB]
Get:172 http://deb.debian.org/debian sid/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B]
Get:173 http://deb.debian.org/debian sid/main amd64 python3-jsonschema all 4.19.2-6 [71.4 kB]
Get:174 http://deb.debian.org/debian sid/main amd64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB]
Get:175 http://deb.debian.org/debian sid/main amd64 python3-jupyter-core all 5.7.2-5 [35.3 kB]
Get:176 http://deb.debian.org/debian sid/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB]
Get:177 http://deb.debian.org/debian sid/main amd64 python3-tenacity all 8.4.2+really8.4.1-2 [46.0 kB]
Get:178 http://deb.debian.org/debian sid/main amd64 python3-plotly all 5.20.0+dfsg-1 [2726 kB]
Get:179 http://deb.debian.org/debian sid/main amd64 python3-spglib amd64 2.6.0-1 [53.5 kB]
Get:180 http://deb.debian.org/debian sid/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB]
Get:181 http://deb.debian.org/debian sid/main amd64 python3-uncertainties all 3.2.2-1 [54.7 kB]
Get:182 http://deb.debian.org/debian sid/main amd64 python3-pymatgen amd64 2025.2.18+dfsg1-4 [2604 kB]
Get:183 http://deb.debian.org/debian sid/main amd64 python3-openbabel amd64 3.1.1+dfsg-12 [578 kB]
Get:184 http://deb.debian.org/debian sid/main amd64 python3-openmm amd64 8.1.2+dfsg-11 [6554 kB]
Get:185 http://deb.debian.org/debian sid/main amd64 python3-emmet-core all 0.84.2-2 [132 kB]
Get:186 http://deb.debian.org/debian sid/main amd64 python3-jsonlines all 4.0.0-3 [9236 B]
Get:187 http://deb.debian.org/debian sid/main amd64 python3-sentinels all 1.0.0-8 [4976 B]
Get:188 http://deb.debian.org/debian sid/main amd64 python3-mongomock all 4.3.0-2 [52.7 kB]
Get:189 http://deb.debian.org/debian sid/main amd64 python3-msgpack amd64 1.0.3-3+b4 [84.5 kB]
Get:190 http://deb.debian.org/debian sid/main amd64 python3-orjson amd64 3.10.7-2+b1 [264 kB]
Get:191 http://deb.debian.org/debian sid/main amd64 python3-pydash all 8.0.3-3 [104 kB]
Get:192 http://deb.debian.org/debian sid/main amd64 python3-pymongo all 4.10.1-5 [272 kB]
Get:193 http://deb.debian.org/debian sid/main amd64 python3-nacl amd64 1.5.0-7 [57.6 kB]
Get:194 http://deb.debian.org/debian sid/main amd64 python3-paramiko all 3.5.1-2 [144 kB]
Get:195 http://deb.debian.org/debian sid/main amd64 python3-sshtunnel all 0.1.4-3 [25.0 kB]
Get:196 http://deb.debian.org/debian sid/main amd64 python3-zmq amd64 26.2.1-1+b1 [182 kB]
Get:197 http://deb.debian.org/debian sid/main amd64 python3-maggma all 0.70.0-4 [84.9 kB]
Get:198 http://deb.debian.org/debian sid/main amd64 python3-wrapt amd64 1.15.0-4+b1 [43.6 kB]
Get:199 http://deb.debian.org/debian sid/main amd64 python3-smart-open all 7.1.0-1 [98.7 kB]
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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
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Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
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update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
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update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
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152 added, 0 removed; done.
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No schema files found: doing nothing.
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Setting up python3-openmm (8.1.2+dfsg-11) ...
/usr/lib/python3/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:426: SyntaxWarning: invalid escape sequence '\S'
r"(?:_(.+?)[.](\S+))" "|" # _category.attribute
/usr/lib/python3/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:444: SyntaxWarning: invalid escape sequence '\S'
"(?:_(.+?)[.](\S+))" "|" # _category.attribute
/usr/lib/python3/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:446: SyntaxWarning: invalid escape sequence '\s'
"(?:['\"](.*?)(?:['\"]\s|['\"]$))" "|" # quoted strings
/usr/lib/python3/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:448: SyntaxWarning: invalid escape sequence '\s'
"(?:\s*#.*$)" "|" # comments (dumped)
/usr/lib/python3/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:450: SyntaxWarning: invalid escape sequence '\S'
"(\S+)" # unquoted words
Setting up python3-lxml:amd64 (5.3.1-1+b1) ...
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Setting up python3-scipy (1.15.2-7) ...
Setting up python3-pydantic-core (2.27.2-2) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-smart-open (7.1.0-1) ...
Setting up python3-jaraco.context (6.0.1-1) ...
Setting up python3-joblib (1.4.2-3) ...
Setting up python3-lz4 (4.4.0+dfsg-2) ...
Setting up python3-jsonlines (4.0.0-3) ...
Setting up python3-charset-normalizer (3.4.1-1+b1) ...
Setting up python3-unicodedata2 (15.1.0+ds-1+b4) ...
Setting up blt (2.5.3+dfsg-8) ...
Setting up python3-tenacity (8.4.2+really8.4.1-2) ...
Setting up python3-bcrypt (4.2.0-2.1+b1) ...
Setting up python3-pandas-lib:amd64 (2.2.3+dfsg-9) ...
Setting up python3-tqdm (4.67.1-3) ...
Setting up python3-typeguard (4.4.2-1) ...
Setting up python3-ruamel.yaml.clib (0.2.12+ds-1+b1) ...
Setting up python3-sentinels (1.0.0-8) ...
Setting up python3-tabulate (0.9.0-1) ...
Setting up python3-latexcodec (3.0.0-1) ...
Setting up libopenbabel7 (3.1.1+dfsg-12) ...
Setting up python3-yaml (6.0.2-1+b2) ...
Setting up python3-tk:amd64 (3.13.3-1) ...
Setting up python3-pytz (2025.2-1) ...
Setting up python3-tz (2025.2-1) ...
Setting up python3-pil:amd64 (11.1.0-5+b1) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-pandas (2.2.3+dfsg-9) ...
Setting up python3-pil.imagetk:amd64 (11.1.0-5+b1) ...
Setting up python3-zmq (26.2.1-1+b1) ...
Setting up python3-cryptography (43.0.0-2) ...
Setting up python3-pydantic (2.10.6-2) ...
Setting up python3-requests (2.32.3+dfsg-5) ...
Setting up python3-sentry-sdk (2.18.0-1) ...
Setting up python3-mongomock (4.3.0-2) ...
Setting up python3-ruamel.yaml (0.18.10+ds-1) ...
Setting up python3-monty (2025.3.3-1) ...
Setting up python3-pydantic-settings (2.8.1-2) ...
Setting up python3-nacl (1.5.0-7) ...
Setting up python3-referencing (0.36.2-1) ...
Setting up python3-pkg-resources (75.8.0-1) ...
Setting up python3-openbabel (3.1.1+dfsg-12) ...
Setting up python3-networkx (3.2.1-5) ...
Setting up python3-palettable (3.3.3-1) ...
Setting up python3-botocore (1.37.9+repack-1) ...
Setting up python3-pybtex (0.24.0-4) ...
Setting up python3-paramiko (3.5.1-2) ...
Setting up python3-jsonschema-specifications (2023.12.1-2) ...
Setting up python3-s3transfer (0.11.4-1) ...
Setting up python3-sshtunnel (0.1.4-3) ...
Setting up python3-jsonschema (4.19.2-6) ...
Setting up python3-boto3 (1.37.9-1) ...
Setting up python3-maggma (0.70.0-4) ...
Setting up python3-nbformat (5.9.1-1) ...
Setting up python3-plotly (5.20.0+dfsg-1) ...
Setting up python3-fonttools (4.57.0-1) ...
Setting up python3-ufolib2 (0.17.1+dfsg1-1) ...
Setting up python3-matplotlib (3.10.1+dfsg1-2) ...
Setting up python3-pymatgen (2025.2.18+dfsg1-4) ...
Setting up python3-custodian (2024.10.16-1) ...
Setting up python3-emmet-core (0.84.2-2) ...
Setting up piuparts-depends-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.41-6) ...
Processing triggers for ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
0m42.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb']
0m42.1s INFO: Installation of ['./tmp/piuparts-depends-dummy.deb'] ok
0m42.1s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmpobmavas9/./tmp/piuparts-depends-dummy.deb
0m42.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy']
0m42.1s DUMP:
piuparts-depends-dummy install ok installed
0m42.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy']
0m42.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--purge', 'piuparts-depends-dummy']
0m42.1s DUMP:
(Reading database ... 43381 files and directories currently installed.)
Removing piuparts-depends-dummy (0.invalid.0) ...
0m42.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--purge', 'piuparts-depends-dummy']
0m42.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'clean']
0m42.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'clean']
0m42.2s DEBUG: Recording chroot state
0m42.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
0m44.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
0m48.1s ERROR: WARN: Broken symlinks:
/usr/share/doc/python3-networkx/html/_static/sphinx_highlight.js -> ../../../../javascript/sphinxdoc/1.0/sphinx_highlight.js
/usr/share/doc/python3-networkx/html/_static/searchtools.js -> ../../../../javascript/sphinxdoc/1.0/searchtools.js
/usr/share/doc/python3-networkx/html/_static/language_data.js -> ../../../../javascript/sphinxdoc/1.0/language_data.js
/usr/share/doc/python3-networkx/html/_static/doctools.js -> ../../../../javascript/sphinxdoc/1.0/doctools.js
0m48.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy']
0m48.6s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian sid/main amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
0m48.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy']
0m48.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy', 'python3-mp-api']
0m48.6s DUMP:
python3-mp-api:
Installed: (none)
Candidate: 0.45.3-4
Version table:
0.45.3-4 500
500 http://deb.debian.org/debian sid/main amd64 Packages
0m48.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy', 'python3-mp-api']
0m48.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-y', 'install', 'python3-mp-api=0.45.3-4']
0m49.4s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
python3-mp-api
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 48.8 kB of archives.
After this operation, 391 kB of additional disk space will be used.
Get:1 http://deb.debian.org/debian sid/main amd64 python3-mp-api all 0.45.3-4 [48.8 kB]
Fetched 48.8 kB in 0s (186 kB/s)
Selecting previously unselected package python3-mp-api.
(Reading database ...
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(Reading database ... 100%
(Reading database ... 43381 files and directories currently installed.)
Preparing to unpack .../python3-mp-api_0.45.3-4_all.deb ...
Unpacking python3-mp-api (0.45.3-4) ...
Setting up python3-mp-api (0.45.3-4) ...
0m49.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-y', 'install', 'python3-mp-api=0.45.3-4']
0m49.4s INFO: Running scripts post_install
0m49.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_install_exceptions']
0m49.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_install_exceptions']
0m49.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'systemd-tmpfiles', '--cat-config']
0m49.4s DUMP:
chroot: failed to run command 'systemd-tmpfiles': No such file or directory
0m49.4s DEBUG: Command failed (status=127), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'systemd-tmpfiles', '--cat-config']
0m49.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'remove', 'python3-mp-api']
0m49.9s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx
libatomic1 libblas3 libboost-iostreams1.83.0 libbrotli1 libcairo2
libcom-err2 libdeflate0 libexpat1 libffi8 libfontconfig1 libfreetype6
libfribidi0 libgfortran5 libglib2.0-0t64 libgomp1 libgraphite2-3
libgssapi-krb5-2 libharfbuzz0b libimagequant0 libinchi1.07 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 liblerc4 libmaeparser1
libnorm1t64 libopenbabel7 libopenjp2-7 libopenmm-dev libopenmm8.1
libpgm-5.3-0t64 libpixman-1-0 libpng16-16t64 libpython3-stdlib libpython3.13
libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libraqm0
libreadline8t64 libsharpyuv0 libsodium23 libsymspg2 libtcl8.6 libtiff6
libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxrender1 libxslt1.1 libxss1 libyaml-0-2 libzmq5 libzopfli1 media-types
netbase python-matplotlib-data python3 python3-aioitertools
python3-annotated-types python3-attr python3-autocommand python3-bcrypt
python3-boto3 python3-botocore python3-brotli python3-bson python3-certifi
python3-cffi-backend python3-chardet python3-charset-normalizer
python3-contourpy python3-cryptography python3-custodian python3-cycler
python3-dateutil python3-decorator python3-dnspython python3-dotenv
python3-email-validator python3-emmet-core python3-fastjsonschema
python3-fonttools python3-fs python3-idna python3-inflect
python3-jaraco.context python3-jaraco.functools python3-jmespath
python3-joblib python3-jsonlines python3-jsonschema
python3-jsonschema-specifications python3-jupyter-core python3-kiwisolver
python3-latexcodec python3-lxml python3-lz4 python3-maggma
python3-matplotlib python3-minimal python3-mongomock python3-monty
python3-more-itertools python3-mpmath python3-msgpack python3-nacl
python3-nbformat python3-networkx python3-numpy python3-numpy-dev
python3-openbabel python3-openmm python3-orjson python3-packaging
python3-palettable python3-pandas python3-pandas-lib python3-paramiko
python3-pil python3-pil.imagetk python3-pkg-resources python3-platformdirs
python3-plotly python3-psutil python3-pybtex python3-pydantic
python3-pydantic-core python3-pydantic-settings python3-pydash
python3-pymatgen python3-pymongo python3-pyparsing python3-pytz
python3-referencing python3-requests python3-rpds-py python3-ruamel.yaml
python3-ruamel.yaml.clib python3-s3transfer python3-scipy python3-sentinels
python3-sentry-sdk python3-six python3-smart-open python3-spglib
python3-sshtunnel python3-sympy python3-tabulate python3-tenacity python3-tk
python3-tqdm python3-traitlets python3-typeguard python3-typing-extensions
python3-tz python3-ufolib2 python3-uncertainties python3-unicodedata2
python3-urllib3 python3-wrapt python3-yaml python3-zmq python3-zopfli
python3.13 python3.13-minimal python3.13-tk readline-common tk8.6-blt2.5
unicode-data x11-common
Use 'sudo apt autoremove' to remove them.
The following packages will be REMOVED:
python3-mp-api
0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
After this operation, 391 kB disk space will be freed.
(Reading database ...
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 43444 files and directories currently installed.)
Removing python3-mp-api (0.45.3-4) ...
0m49.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'remove', 'python3-mp-api']
0m49.9s INFO: Reinstalling after remove
0m49.9s INFO: Running scripts pre_install
0m49.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_database-server']
0m49.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_database-server']
0m49.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_exceptions']
0m49.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_exceptions']
0m49.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_extras']
0m49.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_extras']
0m49.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture']
0m49.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture']
0m49.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m49.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m49.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy']
0m50.0s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian sid/main amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
0m50.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy']
0m50.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy', 'python3-mp-api']
0m50.0s DUMP:
python3-mp-api:
Installed: (none)
Candidate: 0.45.3-4
Version table:
0.45.3-4 500
500 http://deb.debian.org/debian sid/main amd64 Packages
0m50.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy', 'python3-mp-api']
0m50.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-y', 'install', 'python3-mp-api=0.45.3-4']
0m50.5s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
python3-mp-api
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 0 B/48.8 kB of archives.
After this operation, 391 kB of additional disk space will be used.
Selecting previously unselected package python3-mp-api.
(Reading database ...
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 43381 files and directories currently installed.)
Preparing to unpack .../python3-mp-api_0.45.3-4_all.deb ...
Unpacking python3-mp-api (0.45.3-4) ...
Setting up python3-mp-api (0.45.3-4) ...
0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-y', 'install', 'python3-mp-api=0.45.3-4']
0m50.5s INFO: Running scripts post_install
0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_install_exceptions']
0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_install_exceptions']
0m50.5s INFO: Running scripts pre_install
0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_database-server']
0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_database-server']
0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_exceptions']
0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_exceptions']
0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_extras']
0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_extras']
0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture']
0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture']
0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m50.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m50.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy']
0m50.6s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian sid/main amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
0m50.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy']
0m50.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy', 'python3-mp-api']
0m50.6s DUMP:
python3-mp-api:
Installed: 0.45.3-4
Candidate: 0.45.3-4
Version table:
*** 0.45.3-4 500
500 http://deb.debian.org/debian sid/main amd64 Packages
100 /var/lib/dpkg/status
0m50.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-cache', 'policy', 'python3-mp-api']
0m50.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-y', 'install', '--reinstall', 'python3-mp-api=0.45.3-4']
0m51.2s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
0 upgraded, 0 newly installed, 1 reinstalled, 0 to remove and 0 not upgraded.
Need to get 0 B/48.8 kB of archives.
After this operation, 0 B of additional disk space will be used.
(Reading database ...
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 43444 files and directories currently installed.)
Preparing to unpack .../python3-mp-api_0.45.3-4_all.deb ...
Unpacking python3-mp-api (0.45.3-4) over (0.45.3-4) ...
Setting up python3-mp-api (0.45.3-4) ...
0m51.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', '-y', 'install', '--reinstall', 'python3-mp-api=0.45.3-4']
0m51.2s INFO: Running scripts post_install
0m51.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_install_exceptions']
0m51.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_install_exceptions']
0m51.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
0m53.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
0m56.5s ERROR: WARN: Broken symlinks:
/usr/share/doc/python3-networkx/html/_static/sphinx_highlight.js -> ../../../../javascript/sphinxdoc/1.0/sphinx_highlight.js (python3-networkx)
/usr/share/doc/python3-networkx/html/_static/searchtools.js -> ../../../../javascript/sphinxdoc/1.0/searchtools.js (python3-networkx)
/usr/share/doc/python3-networkx/html/_static/language_data.js -> ../../../../javascript/sphinxdoc/1.0/language_data.js (python3-networkx)
/usr/share/doc/python3-networkx/html/_static/doctools.js -> ../../../../javascript/sphinxdoc/1.0/doctools.js (python3-networkx)
0m58.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpobmavas9', '-ac', '--ignore-obsolete']
1m1.0s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpobmavas9', '-ac', '--ignore-obsolete']
1m1.0s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate']
1m1.0s DUMP:
0.15.6
1m1.0s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate']
1m1.0s INFO: Running adequate version 0.15.6 now.
1m1.0s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'python3-mp-api']
1m1.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'python3-mp-api']
1m1.0s INFO: Running scripts pre_remove
1m1.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_40_find_missing_md5sums']
1m1.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_40_find_missing_md5sums']
1m1.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles']
1m1.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles']
1m1.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_40_find_unowned_lib_links']
1m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_40_find_unowned_lib_links']
1m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_50_find_bad_permissions']
1m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_50_find_bad_permissions']
1m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_50_find_missing_copyright']
1m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_50_find_missing_copyright']
1m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_exceptions']
1m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_exceptions']
1m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_preseed_cleanup']
1m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/pre_remove_preseed_cleanup']
1m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
1m3.2s DUMP:
install ok installed apt apt 3.0.0
install ok installed base-files base-files 13.7
install ok installed base-passwd base-passwd 3.6.7
install ok installed bash bash 5.2.37-1.1+b2
install ok installed blt blt 2.5.3+dfsg-8
install ok installed bsdutils bsdutils 1:2.41-3
install ok installed ca-certificates ca-certificates 20241223
install ok installed coreutils coreutils 9.6-2
install ok installed dash dash 0.5.12-12
install ok installed dbconfig-common dbconfig-common 2.0.24
install ok installed debconf debconf 1.5.91
install ok installed debian-archive-keyring debian-archive-keyring 2023.4
install ok installed debianutils debianutils 5.21
install ok installed diffutils diffutils 1:3.10-3
install ok installed dpkg dpkg 1.22.18
install ok installed findutils findutils 4.10.0-3
install ok installed fontconfig-config fontconfig-config 2.15.0-2.3
install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-8
install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-8
install ok installed fonts-lyx fonts-lyx 2.4.3-1
install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-19
install ok installed grep grep 3.11-4
install ok installed gzip gzip 1.13-1
install ok installed hostname hostname 3.25
install ok installed init-system-helpers init-system-helpers 1.68
install ok installed libacl1:amd64 libacl1 2.3.2-2+b1
install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.0.0
install ok installed libatomic1:amd64 libatomic1 14.2.0-19
install ok installed libattr1:amd64 libattr1 1:2.5.2-3
install ok installed libaudit-common libaudit-common 1:4.0.2-2
install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2+b2
install ok installed libblas3:amd64 libblas3 3.12.1-2
install ok installed libblkid1:amd64 libblkid1 2.41-3
install ok installed libboost-iostreams1.83.0:amd64 libboost-iostreams1.83.0 1.83.0-4.2
install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b7
install ok installed libbsd0:amd64 libbsd0 0.12.2-2
install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6
install ok installed libc-bin libc-bin 2.41-6
install ok installed libc6:amd64 libc6 2.41-6
install ok installed libcairo2:amd64 libcairo2 1.18.4-1+b1
install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4+b1
install ok installed libcap2:amd64 libcap2 1:2.75-4
install ok installed libcom-err2:amd64 libcom-err2 1.47.2-1+b1
install ok installed libcrypt1:amd64 libcrypt1 1:4.4.38-1
install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9
install ok installed libdebconfclient0:amd64 libdebconfclient0 0.278
install ok installed libdeflate0:amd64 libdeflate0 1.23-1+b1
install ok installed libexpat1:amd64 libexpat1 2.7.1-1
install ok installed libffi8:amd64 libffi8 3.4.7-1
install ok installed libfontconfig1:amd64 libfontconfig1 2.15.0-2.3
install ok installed libfreetype6:amd64 libfreetype6 2.13.3+dfsg-1
install ok installed libfribidi0:amd64 libfribidi0 1.0.16-1
install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-19
install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-7
install ok installed libgfortran5:amd64 libgfortran5 14.2.0-19
install ok installed libglib2.0-0t64:amd64 libglib2.0-0t64 2.84.1-1
install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3
install ok installed libgomp1:amd64 libgomp1 14.2.0-19
install ok installed libgpg-error0:amd64 libgpg-error0 1.51-4
install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-2+b1
install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-5
install ok installed libharfbuzz0b:amd64 libharfbuzz0b 10.2.0-1+b1
install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.1-1
install ok installed libimagequant0:amd64 libimagequant0 2.18.0-1+b2
install ok installed libinchi1.07 libinchi1.07 1.07.3+dfsg-1
install ok installed libjbig0:amd64 libjbig0 2.1-6.1+b2
install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-3.1
install ok installed libjs-jquery libjs-jquery 3.6.1+dfsg+~3.5.14-1
install ok installed libjs-jquery-ui libjs-jquery-ui 1.13.2+dfsg-1
install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-5
install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-5
install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-5
install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-5
install ok installed liblapack3:amd64 liblapack3 3.12.1-2
install ok installed liblastlog2-2:amd64 liblastlog2-2 2.41-3
install ok installed liblcms2-2:amd64 liblcms2-2 2.16-2
install ok installed liblerc4:amd64 liblerc4 4.0.0+ds-5
install ok installed liblz4-1:amd64 liblz4-1 1.10.0-4
install ok installed liblzma5:amd64 liblzma5 5.8.1-1
install ok installed libmaeparser1:amd64 libmaeparser1 1.3.1-1+b2
install ok installed libmd0:amd64 libmd0 1.1.0-2+b1
install ok installed libmount1:amd64 libmount1 2.41-3
install ok installed libncursesw6:amd64 libncursesw6 6.5+20250216-2
install ok installed libnettle8t64:amd64 libnettle8t64 3.10.1-1
install ok installed libnorm1t64:amd64 libnorm1t64 1.5.9+dfsg-3.1+b2
install ok installed libopenbabel7 libopenbabel7 3.1.1+dfsg-12
install ok installed libopenjp2-7:amd64 libopenjp2-7 2.5.3-2
install ok installed libopenmm-dev libopenmm-dev 8.1.2+dfsg-11
install ok installed libopenmm8.1 libopenmm8.1 8.1.2+dfsg-11
install ok installed libpam-modules:amd64 libpam-modules 1.7.0-3
install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-3
install ok installed libpam-runtime libpam-runtime 1.7.0-3
install ok installed libpam0g:amd64 libpam0g 1.7.0-3
install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.45-1
install ok installed libpgm-5.3-0t64:amd64 libpgm-5.3-0t64 5.3.128~dfsg-2.1+b1
install ok installed libpixman-1-0:amd64 libpixman-1-0 0.44.0-3
install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.47-1.1
install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-7
install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.13.2-2
install ok installed libpython3.13:amd64 libpython3.13 3.13.3-1
install ok installed libpython3.13-minimal:amd64 libpython3.13-minimal 3.13.3-1
install ok installed libpython3.13-stdlib:amd64 libpython3.13-stdlib 3.13.3-1
install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-6+b2
install ok installed libraqm0:amd64 libraqm0 0.10.2-1
install ok installed libreadline8t64:amd64 libreadline8t64 8.2-6
install ok installed libseccomp2:amd64 libseccomp2 2.6.0-2
install ok installed libselinux1:amd64 libselinux1 3.8.1-1
install ok installed libsemanage-common libsemanage-common 3.8.1-1
install ok installed libsemanage2:amd64 libsemanage2 3.8.1-1
install ok installed libsepol2:amd64 libsepol2 3.8.1-1
install ok installed libsharpyuv0:amd64 libsharpyuv0 1.5.0-0.1
install ok installed libsmartcols1:amd64 libsmartcols1 2.41-3
install ok installed libsodium23:amd64 libsodium23 1.0.18-1+b2
install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-2
install ok installed libssl3t64:amd64 libssl3t64 3.5.0-1
install ok installed libstdc++6:amd64 libstdc++6 14.2.0-19
install ok installed libsymspg2:amd64 libsymspg2 2.6.0-1
install ok installed libsystemd0:amd64 libsystemd0 257.5-2
install ok installed libtcl8.6:amd64 libtcl8.6 8.6.16+dfsg-1
install ok installed libtext-charwidth-perl:amd64 libtext-charwidth-perl 0.04-11+b4
install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-10
install ok installed libtiff6:amd64 libtiff6 4.7.0-3
install ok installed libtinfo6:amd64 libtinfo6 6.5+20250216-2
install ok installed libtk8.6:amd64 libtk8.6 8.6.16-1
install ok installed libudev1:amd64 libudev1 257.5-2
install ok installed libuuid1:amd64 libuuid1 2.41-3
install ok installed libwebp7:amd64 libwebp7 1.5.0-0.1
install ok installed libwebpdemux2:amd64 libwebpdemux2 1.5.0-0.1
install ok installed libwebpmux3:amd64 libwebpmux3 1.5.0-0.1
install ok installed libx11-6:amd64 libx11-6 2:1.8.12-1
install ok installed libx11-data libx11-data 2:1.8.12-1
install ok installed libxau6:amd64 libxau6 1:1.0.11-1
install ok installed libxcb-render0:amd64 libxcb-render0 1.17.0-2+b1
install ok installed libxcb-shm0:amd64 libxcb-shm0 1.17.0-2+b1
install ok installed libxcb1:amd64 libxcb1 1.17.0-2+b1
install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.5-1
install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b3
install ok installed libxft2:amd64 libxft2 2.3.6-1+b4
install ok installed libxml2:amd64 libxml2 2.12.7+dfsg+really2.9.14-0.4
install ok installed libxrender1:amd64 libxrender1 1:0.9.12-1
install ok installed libxslt1.1:amd64 libxslt1.1 1.1.35-1.2
install ok installed libxss1:amd64 libxss1 1:1.2.3-1+b3
install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2
install ok installed libyaml-0-2:amd64 libyaml-0-2 0.2.5-2
install ok installed libzmq5:amd64 libzmq5 4.3.5-1+b3
install ok installed libzopfli1 libzopfli1 1.0.3-3
install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-1
install ok installed login login 1:4.16.0-2+really2.41-3
install ok installed login.defs login.defs 1:4.17.4-1
install ok installed mawk mawk 1.3.4.20250131-1
install ok installed media-types media-types 13.0.0
install ok installed mount mount 2.41-3
install ok installed ncurses-base ncurses-base 6.5+20250216-2
install ok installed ncurses-bin ncurses-bin 6.5+20250216-2
install ok installed netbase netbase 6.5
install ok installed openssl openssl 3.5.0-1
install ok installed openssl-provider-legacy openssl-provider-legacy 3.5.0-1
install ok installed passwd passwd 1:4.17.4-1
install ok installed perl-base perl-base 5.40.1-2
install ok installed procps procps 2:4.0.4-7
install ok installed python-matplotlib-data python-matplotlib-data 3.10.1+dfsg1-2
install ok installed python3 python3 3.13.2-2
install ok installed python3-aioitertools python3-aioitertools 0.12.0-1
install ok installed python3-annotated-types python3-annotated-types 0.7.0-1
install ok installed python3-attr python3-attr 25.3.0-1
install ok installed python3-autocommand python3-autocommand 2.2.2-3
install ok installed python3-bcrypt python3-bcrypt 4.2.0-2.1+b1
install ok installed python3-boto3 python3-boto3 1.37.9-1
install ok installed python3-botocore python3-botocore 1.37.9+repack-1
install ok installed python3-brotli python3-brotli 1.1.0-2+b7
install ok installed python3-bson python3-bson 4.10.1-5
install ok installed python3-certifi python3-certifi 2025.1.31+ds-1
install ok installed python3-cffi-backend:amd64 python3-cffi-backend 1.17.1-2+b2
install ok installed python3-chardet python3-chardet 5.2.0+dfsg-2
install ok installed python3-charset-normalizer python3-charset-normalizer 3.4.1-1+b1
install ok installed python3-contourpy python3-contourpy 1.3.1-1+b1
install ok installed python3-cryptography python3-cryptography 43.0.0-2
install ok installed python3-custodian python3-custodian 2024.10.16-1
install ok installed python3-cycler python3-cycler 0.12.1-1
install ok installed python3-dateutil python3-dateutil 2.9.0-4
install ok installed python3-decorator python3-decorator 5.2.1-1
install ok installed python3-dnspython python3-dnspython 2.7.0-1
install ok installed python3-dotenv python3-dotenv 1.0.1-1
install ok installed python3-email-validator python3-email-validator 2.2.0-1
install ok installed python3-emmet-core python3-emmet-core 0.84.2-2
install ok installed python3-fastjsonschema python3-fastjsonschema 2.21.1-1
install ok installed python3-fonttools python3-fonttools 4.57.0-1
install ok installed python3-fs python3-fs 2.4.16-7
install ok installed python3-idna python3-idna 3.10-1
install ok installed python3-inflect python3-inflect 7.3.1-2
install ok installed python3-jaraco.context python3-jaraco.context 6.0.1-1
install ok installed python3-jaraco.functools python3-jaraco.functools 4.1.0-1
install ok installed python3-jmespath python3-jmespath 1.0.1-1
install ok installed python3-joblib python3-joblib 1.4.2-3
install ok installed python3-jsonlines python3-jsonlines 4.0.0-3
install ok installed python3-jsonschema python3-jsonschema 4.19.2-6
install ok installed python3-jsonschema-specifications python3-jsonschema-specifications 2023.12.1-2
install ok installed python3-jupyter-core python3-jupyter-core 5.7.2-5
install ok installed python3-kiwisolver python3-kiwisolver 1.4.7-3+b1
install ok installed python3-latexcodec python3-latexcodec 3.0.0-1
install ok installed python3-lxml:amd64 python3-lxml 5.3.1-1+b1
install ok installed python3-lz4 python3-lz4 4.4.0+dfsg-2
install ok installed python3-maggma python3-maggma 0.70.0-4
install ok installed python3-matplotlib python3-matplotlib 3.10.1+dfsg1-2
install ok installed python3-minimal python3-minimal 3.13.2-2
install ok installed python3-mongomock python3-mongomock 4.3.0-2
install ok installed python3-monty python3-monty 2025.3.3-1
install ok installed python3-more-itertools python3-more-itertools 10.6.0-1
install ok installed python3-mp-api python3-mp-api 0.45.3-4
install ok installed python3-mpmath python3-mpmath 1.3.0-1
install ok installed python3-msgpack python3-msgpack 1.0.3-3+b4
install ok installed python3-nacl python3-nacl 1.5.0-7
install ok installed python3-nbformat python3-nbformat 5.9.1-1
install ok installed python3-networkx python3-networkx 3.2.1-5
install ok installed python3-numpy python3-numpy 1:2.2.4+ds-1
install ok installed python3-numpy-dev:amd64 python3-numpy-dev 1:2.2.4+ds-1
install ok installed python3-openbabel python3-openbabel 3.1.1+dfsg-12
install ok installed python3-openmm python3-openmm 8.1.2+dfsg-11
install ok installed python3-orjson python3-orjson 3.10.7-2+b1
install ok installed python3-packaging python3-packaging 24.2-1
install ok installed python3-palettable python3-palettable 3.3.3-1
install ok installed python3-pandas python3-pandas 2.2.3+dfsg-9
install ok installed python3-pandas-lib:amd64 python3-pandas-lib 2.2.3+dfsg-9
install ok installed python3-paramiko python3-paramiko 3.5.1-2
install ok installed python3-pil:amd64 python3-pil 11.1.0-5+b1
install ok installed python3-pil.imagetk:amd64 python3-pil.imagetk 11.1.0-5+b1
install ok installed python3-pkg-resources python3-pkg-resources 75.8.0-1
install ok installed python3-platformdirs python3-platformdirs 4.3.7-1
install ok installed python3-plotly python3-plotly 5.20.0+dfsg-1
install ok installed python3-psutil python3-psutil 7.0.0-1
install ok installed python3-pybtex python3-pybtex 0.24.0-4
install ok installed python3-pydantic python3-pydantic 2.10.6-2
install ok installed python3-pydantic-core python3-pydantic-core 2.27.2-2
install ok installed python3-pydantic-settings python3-pydantic-settings 2.8.1-2
install ok installed python3-pydash python3-pydash 8.0.3-3
install ok installed python3-pymatgen python3-pymatgen 2025.2.18+dfsg1-4
install ok installed python3-pymongo python3-pymongo 4.10.1-5
install ok installed python3-pyparsing python3-pyparsing 3.1.2-1
install ok installed python3-pytz python3-pytz 2025.2-1
install ok installed python3-referencing python3-referencing 0.36.2-1
install ok installed python3-requests python3-requests 2.32.3+dfsg-5
install ok installed python3-rpds-py python3-rpds-py 0.21.0-2+b1
install ok installed python3-ruamel.yaml python3-ruamel.yaml 0.18.10+ds-1
install ok installed python3-ruamel.yaml.clib python3-ruamel.yaml.clib 0.2.12+ds-1+b1
install ok installed python3-s3transfer python3-s3transfer 0.11.4-1
install ok installed python3-scipy python3-scipy 1.15.2-7
install ok installed python3-sentinels python3-sentinels 1.0.0-8
install ok installed python3-sentry-sdk python3-sentry-sdk 2.18.0-1
install ok installed python3-six python3-six 1.17.0-1
install ok installed python3-smart-open python3-smart-open 7.1.0-1
install ok installed python3-spglib python3-spglib 2.6.0-1
install ok installed python3-sshtunnel python3-sshtunnel 0.1.4-3
install ok installed python3-sympy python3-sympy 1.13.3-5
install ok installed python3-tabulate python3-tabulate 0.9.0-1
install ok installed python3-tenacity python3-tenacity 8.4.2+really8.4.1-2
install ok installed python3-tk:amd64 python3-tk 3.13.3-1
install ok installed python3-tqdm python3-tqdm 4.67.1-3
install ok installed python3-traitlets python3-traitlets 5.14.3+really5.14.3-1
install ok installed python3-typeguard python3-typeguard 4.4.2-1
install ok installed python3-typing-extensions python3-typing-extensions 4.13.1-1
install ok installed python3-tz python3-tz 2025.2-1
install ok installed python3-ufolib2 python3-ufolib2 0.17.1+dfsg1-1
install ok installed python3-uncertainties python3-uncertainties 3.2.2-1
install ok installed python3-unicodedata2 python3-unicodedata2 15.1.0+ds-1+b4
install ok installed python3-urllib3 python3-urllib3 2.3.0-2
install ok installed python3-wrapt python3-wrapt 1.15.0-4+b1
install ok installed python3-yaml python3-yaml 6.0.2-1+b2
install ok installed python3-zmq python3-zmq 26.2.1-1+b1
install ok installed python3-zopfli python3-zopfli 0.2.3.post1-1+b1
install ok installed python3.13 python3.13 3.13.3-1
install ok installed python3.13-minimal python3.13-minimal 3.13.3-1
install ok installed python3.13-tk python3.13-tk 3.13.3-1
install ok installed readline-common readline-common 8.2-6
install ok installed sed sed 4.9-2
install ok installed sensible-utils sensible-utils 0.0.24
install ok installed sqv sqv 1.3.0-1
install ok installed sysvinit-utils sysvinit-utils 3.14-4
install ok installed tar tar 1.35+dfsg-3.1
install ok installed tk8.6-blt2.5 tk8.6-blt2.5 2.5.3+dfsg-8
install ok installed tzdata tzdata 2025b-1
install ok installed ucf ucf 3.0051
install ok installed unicode-data unicode-data 15.1.0-1
install ok installed usr-is-merged usr-is-merged 39+nmu2
install ok installed util-linux util-linux 2.41-3
install ok installed x11-common x11-common 1:7.7+24
install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1
1m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
1m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'remove', '--allow-remove-essential', 'blt', 'ca-certificates', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-lyx', 'libatomic1:amd64', 'libblas3:amd64', 'libboost-iostreams1.83.0:amd64', 'libbrotli1:amd64', 'libcairo2:amd64', 'libcom-err2:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcrypt20:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libimagequant0:amd64', 'libinchi1.07', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'liblerc4:amd64', 'libmaeparser1:amd64', 'libnorm1t64:amd64', 'libopenbabel7', 'libopenjp2-7:amd64', 'libopenmm-dev', 'libopenmm8.1', 'libpgm-5.3-0t64:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libraqm0:amd64', 'libreadline8t64:amd64', 'libsharpyuv0:amd64', 'libsodium23:amd64', 'libsymspg2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libyaml-0-2:amd64', 'libzmq5:amd64', 'libzopfli1', 'media-types', 'netbase', 'openssl', 'python-matplotlib-data', 'python3', 'python3-aioitertools', 'python3-annotated-types', 'python3-attr', 'python3-autocommand', 'python3-bcrypt', 'python3-boto3', 'python3-botocore', 'python3-brotli', 'python3-bson', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cryptography', 'python3-custodian', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-dnspython', 'python3-dotenv', 'python3-email-validator', 'python3-emmet-core', 'python3-fastjsonschema', 'python3-fonttools', 'python3-fs', 'python3-idna', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jmespath', 'python3-joblib', 'python3-jsonlines', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-kiwisolver', 'python3-latexcodec', 'python3-lxml:amd64', 'python3-lz4', 'python3-maggma', 'python3-matplotlib', 'python3-minimal', 'python3-mongomock', 'python3-monty', 'python3-more-itertools', 'python3-mpmath', 'python3-msgpack', 'python3-nacl', 'python3-nbformat', 'python3-networkx', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-openbabel', 'python3-openmm', 'python3-orjson', 'python3-packaging', 'python3-palettable', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-paramiko', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-platformdirs', 'python3-plotly', 'python3-psutil', 'python3-pybtex', 'python3-pydantic', 'python3-pydantic-core', 'python3-pydantic-settings', 'python3-pydash', 'python3-pymatgen', 'python3-pymongo', 'python3-pyparsing', 'python3-pytz', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-ruamel.yaml', 'python3-ruamel.yaml.clib', 'python3-s3transfer', 'python3-scipy', 'python3-sentinels', 'python3-sentry-sdk', 'python3-six', 'python3-smart-open', 'python3-spglib', 'python3-sshtunnel', 'python3-sympy', 'python3-tabulate', 'python3-tenacity', 'python3-tk:amd64', 'python3-tqdm', 'python3-traitlets', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-uncertainties', 'python3-unicodedata2', 'python3-urllib3', 'python3-wrapt', 'python3-yaml', 'python3-zmq', 'python3-zopfli', 'python3.13', 'python3.13-minimal', 'python3.13-tk', 'readline-common', 'tk8.6-blt2.5', 'unicode-data', 'x11-common', 'python3-mp-api']
1m9.8s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
blt ca-certificates fontconfig-config fonts-dejavu-core fonts-dejavu-mono
fonts-lyx libatomic1 libblas3 libboost-iostreams1.83.0 libbrotli1 libcairo2
libcom-err2 libdeflate0 libexpat1 libffi8 libfontconfig1 libfreetype6
libfribidi0 libgcrypt20 libgfortran5 libglib2.0-0t64 libgomp1 libgpg-error0
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libimagequant0 libinchi1.07
libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 liblerc4
libmaeparser1 libnorm1t64 libopenbabel7 libopenjp2-7 libopenmm-dev
libopenmm8.1 libpgm-5.3-0t64 libpixman-1-0 libpng16-16t64 libpython3-stdlib
libpython3.13 libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0
libraqm0 libreadline8t64 libsharpyuv0 libsodium23 libsymspg2 libtcl8.6
libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
libxml2 libxrender1 libxslt1.1 libxss1 libyaml-0-2 libzmq5 libzopfli1
media-types netbase openssl python-matplotlib-data python3
python3-aioitertools python3-annotated-types python3-attr
python3-autocommand python3-bcrypt python3-boto3 python3-botocore
python3-brotli python3-bson python3-certifi python3-cffi-backend
python3-chardet python3-charset-normalizer python3-contourpy
python3-cryptography python3-custodian python3-cycler python3-dateutil
python3-decorator python3-dnspython python3-dotenv python3-email-validator
python3-emmet-core python3-fastjsonschema python3-fonttools python3-fs
python3-idna python3-inflect python3-jaraco.context python3-jaraco.functools
python3-jmespath python3-joblib python3-jsonlines python3-jsonschema
python3-jsonschema-specifications python3-jupyter-core python3-kiwisolver
python3-latexcodec python3-lxml python3-lz4 python3-maggma
python3-matplotlib python3-minimal python3-mongomock python3-monty
python3-more-itertools python3-mp-api python3-mpmath python3-msgpack
python3-nacl python3-nbformat python3-networkx python3-numpy
python3-numpy-dev python3-openbabel python3-openmm python3-orjson
python3-packaging python3-palettable python3-pandas python3-pandas-lib
python3-paramiko python3-pil python3-pil.imagetk python3-pkg-resources
python3-platformdirs python3-plotly python3-psutil python3-pybtex
python3-pydantic python3-pydantic-core python3-pydantic-settings
python3-pydash python3-pymatgen python3-pymongo python3-pyparsing
python3-pytz python3-referencing python3-requests python3-rpds-py
python3-ruamel.yaml python3-ruamel.yaml.clib python3-s3transfer
python3-scipy python3-sentinels python3-sentry-sdk python3-six
python3-smart-open python3-spglib python3-sshtunnel python3-sympy
python3-tabulate python3-tenacity python3-tk python3-tqdm python3-traitlets
python3-typeguard python3-typing-extensions python3-tz python3-ufolib2
python3-uncertainties python3-unicodedata2 python3-urllib3 python3-wrapt
python3-yaml python3-zmq python3-zopfli python3.13 python3.13-minimal
python3.13-tk readline-common tk8.6-blt2.5 unicode-data x11-common
0 upgraded, 0 newly installed, 199 to remove and 0 not upgraded.
After this operation, 808 MB disk space will be freed.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 43444 files and directories currently installed.)
Removing python3-mp-api (0.45.3-4) ...
Removing python3-emmet-core (0.84.2-2) ...
Removing python3-pymatgen (2025.2.18+dfsg1-4) ...
Removing python3-custodian (2024.10.16-1) ...
Removing python3-matplotlib (3.10.1+dfsg1-2) ...
Removing python3-pil.imagetk:amd64 (11.1.0-5+b1) ...
Removing python3-pil:amd64 (11.1.0-5+b1) ...
Removing python3-tk:amd64 (3.13.3-1) ...
Removing blt (2.5.3+dfsg-8) ...
Removing python3-maggma (0.70.0-4) ...
Removing python3-boto3 (1.37.9-1) ...
Removing python3-s3transfer (0.11.4-1) ...
Removing python3-botocore (1.37.9+repack-1) ...
Removing python3-plotly (5.20.0+dfsg-1) ...
Removing python3-requests (2.32.3+dfsg-5) ...
Removing python3-sentry-sdk (2.18.0-1) ...
Removing python3-certifi (2025.1.31+ds-1) ...
Removing ca-certificates (20241223) ...
Removing dangling symlinks from /etc/ssl/certs... done.
Removing tk8.6-blt2.5 (2.5.3+dfsg-8) ...
Removing python3.13-tk (3.13.3-1) ...
Removing libtk8.6:amd64 (8.6.16-1) ...
Removing libxft2:amd64 (2.3.6-1+b4) ...
Removing python3-openbabel (3.1.1+dfsg-12) ...
Removing libopenbabel7 (3.1.1+dfsg-12) ...
Removing libcairo2:amd64 (1.18.4-1+b1) ...
Removing libfontconfig1:amd64 (2.15.0-2.3) ...
Removing fontconfig-config (2.15.0-2.3) ...
Removing python-matplotlib-data (3.10.1+dfsg1-2) ...
Removing fonts-dejavu-core (2.37-8) ...
Removing fonts-dejavu-mono (2.37-8) ...
Removing fonts-lyx (2.4.3-1) ...
Removing libraqm0:amd64 (0.10.2-1) ...
Removing libharfbuzz0b:amd64 (10.2.0-1+b1) ...
Removing libglib2.0-0t64:amd64 (2.84.1-1) ...
Removing libatomic1:amd64 (14.2.0-19) ...
Removing python3-uncertainties (3.2.2-1) ...
Removing python3-spglib (2.6.0-1) ...
Removing python3-monty (2025.3.3-1) ...
Removing python3-pandas (2.2.3+dfsg-9) ...
Removing python3-pandas-lib:amd64 (2.2.3+dfsg-9) ...
Removing libmaeparser1:amd64 (1.3.1-1+b2) ...
Removing libboost-iostreams1.83.0:amd64 (1.83.0-4.2) ...
Removing libfreetype6:amd64 (2.13.3+dfsg-1) ...
Removing libbrotli1:amd64 (1.1.0-2+b7) ...
Removing python3-zmq (26.2.1-1+b1) ...
Removing libzmq5:amd64 (4.3.5-1+b3) ...
Removing libgssapi-krb5-2:amd64 (1.21.3-5) ...
Removing libkrb5-3:amd64 (1.21.3-5) ...
Removing libcom-err2:amd64 (1.47.2-1+b1) ...
Removing libtiff6:amd64 (4.7.0-3) ...
Removing libdeflate0:amd64 (1.23-1+b1) ...
Removing python3-ruamel.yaml (0.18.10+ds-1) ...
Removing python3-ruamel.yaml.clib (0.2.12+ds-1+b1) ...
Removing python3-nbformat (5.9.1-1) ...
Removing python3-jupyter-core (5.7.2-5) ...
Removing python3-traitlets (5.14.3+really5.14.3-1) ...
Removing python3-jsonschema (4.19.2-6) ...
Removing python3-jsonschema-specifications (2023.12.1-2) ...
Removing python3-referencing (0.36.2-1) ...
Removing python3-rpds-py (0.21.0-2+b1) ...
Removing python3-tqdm (4.67.1-3) ...
Removing python3-pybtex (0.24.0-4) ...
Removing libpython3.13:amd64 (3.13.3-1) ...
Removing python3-sshtunnel (0.1.4-3) ...
Removing python3-paramiko (3.5.1-2) ...
Removing python3-nacl (1.5.0-7) ...
Removing python3-cryptography (43.0.0-2) ...
Removing python3-cffi-backend:amd64 (1.17.1-2+b2) ...
Removing libfribidi0:amd64 (1.0.16-1) ...
Removing libimagequant0:amd64 (2.18.0-1+b2) ...
Removing libgomp1:amd64 (14.2.0-19) ...
Removing libgraphite2-3:amd64 (1.3.14-2+b1) ...
Removing libinchi1.07 (1.07.3+dfsg-1) ...
Removing libjbig0:amd64 (2.1-6.1+b2) ...
Removing libjpeg62-turbo:amd64 (1:2.1.5-3.1) ...
Removing libjs-jquery-ui (1.13.2+dfsg-1) ...
Removing libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Removing libk5crypto3:amd64 (1.21.3-5) ...
Removing libkeyutils1:amd64 (1.6.3-5) ...
Removing libkrb5support0:amd64 (1.21.3-5) ...
Removing liblcms2-2:amd64 (2.16-2) ...
Removing liblerc4:amd64 (4.0.0+ds-5) ...
Removing libnorm1t64:amd64 (1.5.9+dfsg-3.1+b2) ...
Removing libopenjp2-7:amd64 (2.5.3-2) ...
Removing python3-openmm (8.1.2+dfsg-11) ...
Removing libopenmm-dev (8.1.2+dfsg-11) ...
Removing libopenmm8.1 (8.1.2+dfsg-11) ...
Removing libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1+b1) ...
Removing libpixman-1-0:amd64 (0.44.0-3) ...
Removing libpng16-16t64:amd64 (1.6.47-1.1) ...
Removing libqhull-r8.0:amd64 (2020.2-6+b2) ...
Removing libwebpmux3:amd64 (1.5.0-0.1) ...
Removing libwebpdemux2:amd64 (1.5.0-0.1) ...
Removing libwebp7:amd64 (1.5.0-0.1) ...
Removing libsharpyuv0:amd64 (1.5.0-0.1) ...
Removing libsodium23:amd64 (1.0.18-1+b2) ...
Removing libsymspg2:amd64 (2.6.0-1) ...
Removing libtcl8.6:amd64 (8.6.16+dfsg-1) ...
Removing libxss1:amd64 (1:1.2.3-1+b3) ...
Removing libxrender1:amd64 (1:0.9.12-1) ...
Removing libxcb-shm0:amd64 (1.17.0-2+b1) ...
Removing libxcb-render0:amd64 (1.17.0-2+b1) ...
Removing libxext6:amd64 (2:1.3.4-1+b3) ...
Removing python3-yaml (6.0.2-1+b2) ...
Removing libyaml-0-2:amd64 (0.2.5-2) ...
Removing python3-pydantic-settings (2.8.1-2) ...
Removing python3-pydantic (2.10.6-2) ...
Removing python3-email-validator (2.2.0-1) ...
Removing python3-pymongo (4.10.1-5) ...
Removing python3-dnspython (2.7.0-1) ...
Removing openssl (3.5.0-1) ...
Removing python3-aioitertools (0.12.0-1) ...
Removing python3-annotated-types (0.7.0-1) ...
Removing python3-jsonlines (4.0.0-3) ...
Removing python3-palettable (3.3.3-1) ...
Removing python3-bcrypt (4.2.0-2.1+b1) ...
Removing python3-bson (4.10.1-5) ...
Removing python3-chardet (5.2.0+dfsg-2) ...
Removing python3-charset-normalizer (3.4.1-1+b1) ...
Removing python3-contourpy (1.3.1-1+b1) ...
Removing python3-cycler (0.12.1-1) ...
Removing python3-dateutil (2.9.0-4) ...
Removing python3-dotenv (1.0.1-1) ...
Removing python3-fastjsonschema (2.21.1-1) ...
Removing python3-idna (3.10-1) ...
Removing python3-jmespath (1.0.1-1) ...
Removing python3-joblib (1.4.2-3) ...
Removing python3-kiwisolver (1.4.7-3+b1) ...
Removing python3-latexcodec (3.0.0-1) ...
Removing python3-mongomock (4.3.0-2) ...
Removing python3-msgpack (1.0.3-3+b4) ...
Removing python3-networkx (3.2.1-5) ...
Removing python3-orjson (3.10.7-2+b1) ...
Removing python3-packaging (24.2-1) ...
Removing python3-psutil (7.0.0-1) ...
Removing python3-pydantic-core (2.27.2-2) ...
Removing python3-pydash (8.0.3-3) ...
Removing python3-pyparsing (3.1.2-1) ...
Removing python3-tz (2025.2-1) ...
Removing python3-pytz (2025.2-1) ...
Removing python3-sentinels (1.0.0-8) ...
Removing python3-six (1.17.0-1) ...
Removing python3-smart-open (7.1.0-1) ...
Removing python3-tabulate (0.9.0-1) ...
Removing python3-tenacity (8.4.2+really8.4.1-2) ...
Removing python3-urllib3 (2.3.0-2) ...
Removing python3-wrapt (1.15.0-4+b1) ...
Removing x11-common (1:7.7+24) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of stop.
Removing python3-pkg-resources (75.8.0-1) ...
Removing python3-inflect (7.3.1-2) ...
Removing python3-typeguard (4.4.2-1) ...
Removing libx11-6:amd64 (2:1.8.12-1) ...
Removing libx11-data (2:1.8.12-1) ...
Removing libxcb1:amd64 (1.17.0-2+b1) ...
Removing libxau6:amd64 (1:1.0.11-1) ...
Removing libxdmcp6:amd64 (1:1.1.5-1) ...
Removing python3-autocommand (2.2.2-3) ...
Removing python3-jaraco.context (6.0.1-1) ...
Removing python3-jaraco.functools (4.1.0-1) ...
Removing python3-more-itertools (10.6.0-1) ...
Removing python3-typing-extensions (4.13.1-1) ...
Removing python3-fonttools (4.57.0-1) ...
Removing python3-ufolib2 (0.17.1+dfsg1-1) ...
Removing python3-scipy (1.15.2-7) ...
Removing python3-numpy (1:2.2.4+ds-1) ...
Removing liblapack3:amd64 (3.12.1-2) ...
Removing libblas3:amd64 (3.12.1-2) ...
Removing python3-lxml:amd64 (5.3.1-1+b1) ...
Removing libxslt1.1:amd64 (1.1.35-1.2) ...
Removing libgcrypt20:amd64 (1.11.0-7) ...
Removing libgfortran5:amd64 (14.2.0-19) ...
Removing libgpg-error0:amd64 (1.51-4) ...
Removing libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ...
Removing python3-zopfli (0.2.3.post1-1+b1) ...
Removing libzopfli1 (1.0.3-3) ...
Removing python3-attr (25.3.0-1) ...
Removing python3-brotli (1.1.0-2+b7) ...
Removing python3-decorator (5.2.1-1) ...
Removing python3-fs (2.4.16-7) ...
Removing python3-lz4 (4.4.0+dfsg-2) ...
Removing python3-sympy (1.13.3-5) ...
Removing python3-mpmath (1.3.0-1) ...
Removing python3-numpy-dev:amd64 (1:2.2.4+ds-1) ...
Removing python3-platformdirs (4.3.7-1) ...
Removing python3-unicodedata2 (15.1.0+ds-1+b4) ...
Removing unicode-data (15.1.0-1) ...
Removing python3 (3.13.2-2) ...
Removing python3.13 (3.13.3-1) ...
Removing python3-minimal (3.13.2-2) ...
Removing python3.13-minimal (3.13.3-1) ...
Removing libexpat1:amd64 (2.7.1-1) ...
Removing libpython3-stdlib:amd64 (3.13.2-2) ...
Removing libpython3.13-stdlib:amd64 (3.13.3-1) ...
find: '/usr/lib/python3': No such file or directory
Removing libffi8:amd64 (3.4.7-1) ...
Removing libpython3.13-minimal:amd64 (3.13.3-1) ...
find: '/usr/lib/python3': No such file or directory
Removing libreadline8t64:amd64 (8.2-6) ...
Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Removing media-types (13.0.0) ...
Removing netbase (6.5) ...
Removing readline-common (8.2-6) ...
Processing triggers for libc-bin (2.41-6) ...
1m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'remove', '--allow-remove-essential', 'blt', 'ca-certificates', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-lyx', 'libatomic1:amd64', 'libblas3:amd64', 'libboost-iostreams1.83.0:amd64', 'libbrotli1:amd64', 'libcairo2:amd64', 'libcom-err2:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcrypt20:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libimagequant0:amd64', 'libinchi1.07', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'liblerc4:amd64', 'libmaeparser1:amd64', 'libnorm1t64:amd64', 'libopenbabel7', 'libopenjp2-7:amd64', 'libopenmm-dev', 'libopenmm8.1', 'libpgm-5.3-0t64:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libraqm0:amd64', 'libreadline8t64:amd64', 'libsharpyuv0:amd64', 'libsodium23:amd64', 'libsymspg2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libyaml-0-2:amd64', 'libzmq5:amd64', 'libzopfli1', 'media-types', 'netbase', 'openssl', 'python-matplotlib-data', 'python3', 'python3-aioitertools', 'python3-annotated-types', 'python3-attr', 'python3-autocommand', 'python3-bcrypt', 'python3-boto3', 'python3-botocore', 'python3-brotli', 'python3-bson', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cryptography', 'python3-custodian', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-dnspython', 'python3-dotenv', 'python3-email-validator', 'python3-emmet-core', 'python3-fastjsonschema', 'python3-fonttools', 'python3-fs', 'python3-idna', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jmespath', 'python3-joblib', 'python3-jsonlines', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-kiwisolver', 'python3-latexcodec', 'python3-lxml:amd64', 'python3-lz4', 'python3-maggma', 'python3-matplotlib', 'python3-minimal', 'python3-mongomock', 'python3-monty', 'python3-more-itertools', 'python3-mpmath', 'python3-msgpack', 'python3-nacl', 'python3-nbformat', 'python3-networkx', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-openbabel', 'python3-openmm', 'python3-orjson', 'python3-packaging', 'python3-palettable', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-paramiko', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-platformdirs', 'python3-plotly', 'python3-psutil', 'python3-pybtex', 'python3-pydantic', 'python3-pydantic-core', 'python3-pydantic-settings', 'python3-pydash', 'python3-pymatgen', 'python3-pymongo', 'python3-pyparsing', 'python3-pytz', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-ruamel.yaml', 'python3-ruamel.yaml.clib', 'python3-s3transfer', 'python3-scipy', 'python3-sentinels', 'python3-sentry-sdk', 'python3-six', 'python3-smart-open', 'python3-spglib', 'python3-sshtunnel', 'python3-sympy', 'python3-tabulate', 'python3-tenacity', 'python3-tk:amd64', 'python3-tqdm', 'python3-traitlets', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-uncertainties', 'python3-unicodedata2', 'python3-urllib3', 'python3-wrapt', 'python3-yaml', 'python3-zmq', 'python3-zopfli', 'python3.13', 'python3.13-minimal', 'python3.13-tk', 'readline-common', 'tk8.6-blt2.5', 'unicode-data', 'x11-common', 'python3-mp-api']
1m9.8s INFO: Running scripts post_remove
1m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_remove_cleanup']
1m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_remove_cleanup']
1m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_remove_exceptions']
1m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_remove_exceptions']
1m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--purge', 'blt', 'ca-certificates', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-lyx', 'libatomic1:amd64', 'libblas3:amd64', 'libboost-iostreams1.83.0:amd64', 'libbrotli1:amd64', 'libcairo2:amd64', 'libcom-err2:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcrypt20:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libimagequant0:amd64', 'libinchi1.07', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'liblerc4:amd64', 'libmaeparser1:amd64', 'libnorm1t64:amd64', 'libopenbabel7', 'libopenjp2-7:amd64', 'libopenmm-dev', 'libopenmm8.1', 'libpgm-5.3-0t64:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libraqm0:amd64', 'libreadline8t64:amd64', 'libsharpyuv0:amd64', 'libsodium23:amd64', 'libsymspg2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libyaml-0-2:amd64', 'libzmq5:amd64', 'libzopfli1', 'media-types', 'netbase', 'openssl', 'python-matplotlib-data', 'python3', 'python3-aioitertools', 'python3-annotated-types', 'python3-attr', 'python3-autocommand', 'python3-bcrypt', 'python3-boto3', 'python3-botocore', 'python3-brotli', 'python3-bson', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cryptography', 'python3-custodian', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-dnspython', 'python3-dotenv', 'python3-email-validator', 'python3-emmet-core', 'python3-fastjsonschema', 'python3-fonttools', 'python3-fs', 'python3-idna', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jmespath', 'python3-joblib', 'python3-jsonlines', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-kiwisolver', 'python3-latexcodec', 'python3-lxml:amd64', 'python3-lz4', 'python3-maggma', 'python3-matplotlib', 'python3-minimal', 'python3-mongomock', 'python3-monty', 'python3-more-itertools', 'python3-mpmath', 'python3-msgpack', 'python3-nacl', 'python3-nbformat', 'python3-networkx', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-openbabel', 'python3-openmm', 'python3-orjson', 'python3-packaging', 'python3-palettable', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-paramiko', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-platformdirs', 'python3-plotly', 'python3-psutil', 'python3-pybtex', 'python3-pydantic', 'python3-pydantic-core', 'python3-pydantic-settings', 'python3-pydash', 'python3-pymatgen', 'python3-pymongo', 'python3-pyparsing', 'python3-pytz', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-ruamel.yaml', 'python3-ruamel.yaml.clib', 'python3-s3transfer', 'python3-scipy', 'python3-sentinels', 'python3-sentry-sdk', 'python3-six', 'python3-smart-open', 'python3-spglib', 'python3-sshtunnel', 'python3-sympy', 'python3-tabulate', 'python3-tenacity', 'python3-tk:amd64', 'python3-tqdm', 'python3-traitlets', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-uncertainties', 'python3-unicodedata2', 'python3-urllib3', 'python3-wrapt', 'python3-yaml', 'python3-zmq', 'python3-zopfli', 'python3.13', 'python3.13-minimal', 'python3.13-tk', 'readline-common', 'tk8.6-blt2.5', 'unicode-data', 'x11-common']
1m10.0s DUMP:
dpkg: warning: ignoring request to remove blt which isn't installed
(Reading database ... 5520 files and directories currently installed.)
Purging configuration files for ca-certificates (20241223) ...
Removing dangling symlinks from /etc/ssl/certs... done.
Purging configuration files for fontconfig-config (2.15.0-2.3) ...
Purging configuration files for fonts-dejavu-core (2.37-8) ...
Purging configuration files for fonts-dejavu-mono (2.37-8) ...
dpkg: warning: ignoring request to remove fonts-lyx which isn't installed
dpkg: warning: ignoring request to remove libatomic1 which isn't installed
dpkg: warning: ignoring request to remove libblas3 which isn't installed
dpkg: warning: ignoring request to remove libboost-iostreams1.83.0 which isn't installed
dpkg: warning: ignoring request to remove libbrotli1 which isn't installed
dpkg: warning: ignoring request to remove libcairo2 which isn't installed
dpkg: warning: ignoring request to remove libcom-err2 which isn't installed
dpkg: warning: ignoring request to remove libdeflate0 which isn't installed
dpkg: warning: ignoring request to remove libexpat1 which isn't installed
dpkg: warning: ignoring request to remove libffi8 which isn't installed
dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed
dpkg: warning: ignoring request to remove libfreetype6 which isn't installed
dpkg: warning: ignoring request to remove libfribidi0 which isn't installed
dpkg: warning: ignoring request to remove libgcrypt20 which isn't installed
dpkg: warning: ignoring request to remove libgfortran5 which isn't installed
Purging configuration files for libglib2.0-0t64:amd64 (2.84.1-1) ...
dpkg: warning: ignoring request to remove libgomp1 which isn't installed
dpkg: warning: ignoring request to remove libgpg-error0 which isn't installed
dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed
Purging configuration files for libgssapi-krb5-2:amd64 (1.21.3-5) ...
dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed
dpkg: warning: ignoring request to remove libimagequant0 which isn't installed
dpkg: warning: ignoring request to remove libinchi1.07 which isn't installed
dpkg: warning: ignoring request to remove libjbig0 which isn't installed
dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed
Purging configuration files for libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
dpkg: warning: ignoring request to remove libjs-jquery-ui which isn't installed
dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed
dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed
dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed
dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed
dpkg: warning: ignoring request to remove liblapack3 which isn't installed
dpkg: warning: ignoring request to remove liblcms2-2 which isn't installed
dpkg: warning: ignoring request to remove liblerc4 which isn't installed
dpkg: warning: ignoring request to remove libmaeparser1 which isn't installed
dpkg: warning: ignoring request to remove libnorm1t64 which isn't installed
dpkg: warning: ignoring request to remove libopenbabel7 which isn't installed
dpkg: warning: ignoring request to remove libopenjp2-7 which isn't installed
dpkg: warning: ignoring request to remove libopenmm-dev which isn't installed
dpkg: warning: ignoring request to remove libopenmm8.1 which isn't installed
dpkg: warning: ignoring request to remove libpgm-5.3-0t64 which isn't installed
dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed
dpkg: warning: ignoring request to remove libpng16-16t64 which isn't installed
dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed
dpkg: warning: ignoring request to remove libpython3.13 which isn't installed
Purging configuration files for libpython3.13-minimal:amd64 (3.13.3-1) ...
dpkg: warning: ignoring request to remove libpython3.13-stdlib which isn't installed
dpkg: warning: ignoring request to remove libqhull-r8.0 which isn't installed
dpkg: warning: ignoring request to remove libraqm0 which isn't installed
Purging configuration files for libreadline8t64:amd64 (8.2-6) ...
dpkg: warning: ignoring request to remove libsharpyuv0 which isn't installed
dpkg: warning: ignoring request to remove libsodium23 which isn't installed
dpkg: warning: ignoring request to remove libsymspg2 which isn't installed
dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed
dpkg: warning: ignoring request to remove libtiff6 which isn't installed
dpkg: warning: ignoring request to remove libtk8.6 which isn't installed
dpkg: warning: ignoring request to remove libwebp7 which isn't installed
dpkg: warning: ignoring request to remove libwebpdemux2 which isn't installed
dpkg: warning: ignoring request to remove libwebpmux3 which isn't installed
dpkg: warning: ignoring request to remove libx11-6 which isn't installed
dpkg: warning: ignoring request to remove libx11-data which isn't installed
dpkg: warning: ignoring request to remove libxau6 which isn't installed
dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed
dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed
dpkg: warning: ignoring request to remove libxcb1 which isn't installed
dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed
dpkg: warning: ignoring request to remove libxext6 which isn't installed
dpkg: warning: ignoring request to remove libxft2 which isn't installed
dpkg: warning: ignoring request to remove libxml2 which isn't installed
dpkg: warning: ignoring request to remove libxrender1 which isn't installed
dpkg: warning: ignoring request to remove libxslt1.1 which isn't installed
dpkg: warning: ignoring request to remove libxss1 which isn't installed
dpkg: warning: ignoring request to remove libyaml-0-2 which isn't installed
dpkg: warning: ignoring request to remove libzmq5 which isn't installed
dpkg: warning: ignoring request to remove libzopfli1 which isn't installed
Purging configuration files for media-types (13.0.0) ...
Purging configuration files for netbase (6.5) ...
Purging configuration files for openssl (3.5.0-1) ...
Purging configuration files for python-matplotlib-data (3.10.1+dfsg1-2) ...
Purging configuration files for python3 (3.13.2-2) ...
dpkg: warning: ignoring request to remove python3-aioitertools which isn't installed
dpkg: warning: ignoring request to remove python3-annotated-types which isn't installed
dpkg: warning: ignoring request to remove python3-attr which isn't installed
dpkg: warning: ignoring request to remove python3-autocommand which isn't installed
dpkg: warning: ignoring request to remove python3-bcrypt which isn't installed
dpkg: warning: ignoring request to remove python3-boto3 which isn't installed
dpkg: warning: ignoring request to remove python3-botocore which isn't installed
dpkg: warning: ignoring request to remove python3-brotli which isn't installed
dpkg: warning: ignoring request to remove python3-bson which isn't installed
dpkg: warning: ignoring request to remove python3-certifi which isn't installed
dpkg: warning: ignoring request to remove python3-cffi-backend which isn't installed
dpkg: warning: ignoring request to remove python3-chardet which isn't installed
dpkg: warning: ignoring request to remove python3-charset-normalizer which isn't installed
dpkg: warning: ignoring request to remove python3-contourpy which isn't installed
dpkg: warning: ignoring request to remove python3-cryptography which isn't installed
dpkg: warning: ignoring request to remove python3-custodian which isn't installed
dpkg: warning: ignoring request to remove python3-cycler which isn't installed
dpkg: warning: ignoring request to remove python3-dateutil which isn't installed
dpkg: warning: ignoring request to remove python3-decorator which isn't installed
dpkg: warning: ignoring request to remove python3-dnspython which isn't installed
dpkg: warning: ignoring request to remove python3-dotenv which isn't installed
dpkg: warning: ignoring request to remove python3-email-validator which isn't installed
dpkg: warning: ignoring request to remove python3-emmet-core which isn't installed
dpkg: warning: ignoring request to remove python3-fastjsonschema which isn't installed
dpkg: warning: ignoring request to remove python3-fonttools which isn't installed
dpkg: warning: ignoring request to remove python3-fs which isn't installed
dpkg: warning: ignoring request to remove python3-idna which isn't installed
dpkg: warning: ignoring request to remove python3-inflect which isn't installed
dpkg: warning: ignoring request to remove python3-jaraco.context which isn't installed
dpkg: warning: ignoring request to remove python3-jaraco.functools which isn't installed
dpkg: warning: ignoring request to remove python3-jmespath which isn't installed
dpkg: warning: ignoring request to remove python3-joblib which isn't installed
dpkg: warning: ignoring request to remove python3-jsonlines which isn't installed
Purging configuration files for python3-jsonschema (4.19.2-6) ...
dpkg: warning: ignoring request to remove python3-jsonschema-specifications which isn't installed
dpkg: warning: ignoring request to remove python3-jupyter-core which isn't installed
dpkg: warning: ignoring request to remove python3-kiwisolver which isn't installed
dpkg: warning: ignoring request to remove python3-latexcodec which isn't installed
dpkg: warning: ignoring request to remove python3-lxml which isn't installed
dpkg: warning: ignoring request to remove python3-lz4 which isn't installed
dpkg: warning: ignoring request to remove python3-maggma which isn't installed
dpkg: warning: ignoring request to remove python3-matplotlib which isn't installed
dpkg: warning: ignoring request to remove python3-minimal which isn't installed
dpkg: warning: ignoring request to remove python3-mongomock which isn't installed
dpkg: warning: ignoring request to remove python3-monty which isn't installed
dpkg: warning: ignoring request to remove python3-more-itertools which isn't installed
dpkg: warning: ignoring request to remove python3-mpmath which isn't installed
dpkg: warning: ignoring request to remove python3-msgpack which isn't installed
dpkg: warning: ignoring request to remove python3-nacl which isn't installed
dpkg: warning: ignoring request to remove python3-nbformat which isn't installed
dpkg: warning: ignoring request to remove python3-networkx which isn't installed
Purging configuration files for python3-numpy (1:2.2.4+ds-1) ...
dpkg: warning: ignoring request to remove python3-numpy-dev which isn't installed
dpkg: warning: ignoring request to remove python3-openbabel which isn't installed
dpkg: warning: ignoring request to remove python3-openmm which isn't installed
dpkg: warning: ignoring request to remove python3-orjson which isn't installed
dpkg: warning: ignoring request to remove python3-packaging which isn't installed
dpkg: warning: ignoring request to remove python3-palettable which isn't installed
dpkg: warning: ignoring request to remove python3-pandas which isn't installed
dpkg: warning: ignoring request to remove python3-pandas-lib which isn't installed
dpkg: warning: ignoring request to remove python3-paramiko which isn't installed
dpkg: warning: ignoring request to remove python3-pil which isn't installed
dpkg: warning: ignoring request to remove python3-pil.imagetk which isn't installed
dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed
dpkg: warning: ignoring request to remove python3-platformdirs which isn't installed
dpkg: warning: ignoring request to remove python3-plotly which isn't installed
dpkg: warning: ignoring request to remove python3-psutil which isn't installed
dpkg: warning: ignoring request to remove python3-pybtex which isn't installed
dpkg: warning: ignoring request to remove python3-pydantic which isn't installed
dpkg: warning: ignoring request to remove python3-pydantic-core which isn't installed
dpkg: warning: ignoring request to remove python3-pydantic-settings which isn't installed
dpkg: warning: ignoring request to remove python3-pydash which isn't installed
dpkg: warning: ignoring request to remove python3-pymatgen which isn't installed
dpkg: warning: ignoring request to remove python3-pymongo which isn't installed
dpkg: warning: ignoring request to remove python3-pyparsing which isn't installed
dpkg: warning: ignoring request to remove python3-pytz which isn't installed
dpkg: warning: ignoring request to remove python3-referencing which isn't installed
dpkg: warning: ignoring request to remove python3-requests which isn't installed
dpkg: warning: ignoring request to remove python3-rpds-py which isn't installed
dpkg: warning: ignoring request to remove python3-ruamel.yaml which isn't installed
dpkg: warning: ignoring request to remove python3-ruamel.yaml.clib which isn't installed
dpkg: warning: ignoring request to remove python3-s3transfer which isn't installed
dpkg: warning: ignoring request to remove python3-scipy which isn't installed
dpkg: warning: ignoring request to remove python3-sentinels which isn't installed
dpkg: warning: ignoring request to remove python3-sentry-sdk which isn't installed
dpkg: warning: ignoring request to remove python3-six which isn't installed
dpkg: warning: ignoring request to remove python3-smart-open which isn't installed
dpkg: warning: ignoring request to remove python3-spglib which isn't installed
dpkg: warning: ignoring request to remove python3-sshtunnel which isn't installed
Purging configuration files for python3-sympy (1.13.3-5) ...
dpkg: warning: ignoring request to remove python3-tabulate which isn't installed
dpkg: warning: ignoring request to remove python3-tenacity which isn't installed
dpkg: warning: ignoring request to remove python3-tk which isn't installed
dpkg: warning: ignoring request to remove python3-tqdm which isn't installed
dpkg: warning: ignoring request to remove python3-traitlets which isn't installed
dpkg: warning: ignoring request to remove python3-typeguard which isn't installed
dpkg: warning: ignoring request to remove python3-typing-extensions which isn't installed
dpkg: warning: ignoring request to remove python3-tz which isn't installed
dpkg: warning: ignoring request to remove python3-ufolib2 which isn't installed
dpkg: warning: ignoring request to remove python3-uncertainties which isn't installed
dpkg: warning: ignoring request to remove python3-unicodedata2 which isn't installed
dpkg: warning: ignoring request to remove python3-urllib3 which isn't installed
dpkg: warning: ignoring request to remove python3-wrapt which isn't installed
dpkg: warning: ignoring request to remove python3-yaml which isn't installed
dpkg: warning: ignoring request to remove python3-zmq which isn't installed
dpkg: warning: ignoring request to remove python3-zopfli which isn't installed
dpkg: warning: ignoring request to remove python3.13 which isn't installed
Purging configuration files for python3.13-minimal (3.13.3-1) ...
dpkg: warning: ignoring request to remove python3.13-tk which isn't installed
Purging configuration files for readline-common (8.2-6) ...
dpkg: warning: ignoring request to remove tk8.6-blt2.5 which isn't installed
dpkg: warning: ignoring request to remove unicode-data which isn't installed
Purging configuration files for x11-common (1:7.7+24) ...
1m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--purge', 'blt', 'ca-certificates', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-lyx', 'libatomic1:amd64', 'libblas3:amd64', 'libboost-iostreams1.83.0:amd64', 'libbrotli1:amd64', 'libcairo2:amd64', 'libcom-err2:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcrypt20:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libimagequant0:amd64', 'libinchi1.07', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblcms2-2:amd64', 'liblerc4:amd64', 'libmaeparser1:amd64', 'libnorm1t64:amd64', 'libopenbabel7', 'libopenjp2-7:amd64', 'libopenmm-dev', 'libopenmm8.1', 'libpgm-5.3-0t64:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.13:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libqhull-r8.0:amd64', 'libraqm0:amd64', 'libreadline8t64:amd64', 'libsharpyuv0:amd64', 'libsodium23:amd64', 'libsymspg2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtk8.6:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libyaml-0-2:amd64', 'libzmq5:amd64', 'libzopfli1', 'media-types', 'netbase', 'openssl', 'python-matplotlib-data', 'python3', 'python3-aioitertools', 'python3-annotated-types', 'python3-attr', 'python3-autocommand', 'python3-bcrypt', 'python3-boto3', 'python3-botocore', 'python3-brotli', 'python3-bson', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cryptography', 'python3-custodian', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-dnspython', 'python3-dotenv', 'python3-email-validator', 'python3-emmet-core', 'python3-fastjsonschema', 'python3-fonttools', 'python3-fs', 'python3-idna', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jmespath', 'python3-joblib', 'python3-jsonlines', 'python3-jsonschema', 'python3-jsonschema-specifications', 'python3-jupyter-core', 'python3-kiwisolver', 'python3-latexcodec', 'python3-lxml:amd64', 'python3-lz4', 'python3-maggma', 'python3-matplotlib', 'python3-minimal', 'python3-mongomock', 'python3-monty', 'python3-more-itertools', 'python3-mpmath', 'python3-msgpack', 'python3-nacl', 'python3-nbformat', 'python3-networkx', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-openbabel', 'python3-openmm', 'python3-orjson', 'python3-packaging', 'python3-palettable', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-paramiko', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-platformdirs', 'python3-plotly', 'python3-psutil', 'python3-pybtex', 'python3-pydantic', 'python3-pydantic-core', 'python3-pydantic-settings', 'python3-pydash', 'python3-pymatgen', 'python3-pymongo', 'python3-pyparsing', 'python3-pytz', 'python3-referencing', 'python3-requests', 'python3-rpds-py', 'python3-ruamel.yaml', 'python3-ruamel.yaml.clib', 'python3-s3transfer', 'python3-scipy', 'python3-sentinels', 'python3-sentry-sdk', 'python3-six', 'python3-smart-open', 'python3-spglib', 'python3-sshtunnel', 'python3-sympy', 'python3-tabulate', 'python3-tenacity', 'python3-tk:amd64', 'python3-tqdm', 'python3-traitlets', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-uncertainties', 'python3-unicodedata2', 'python3-urllib3', 'python3-wrapt', 'python3-yaml', 'python3-zmq', 'python3-zopfli', 'python3.13', 'python3.13-minimal', 'python3.13-tk', 'readline-common', 'tk8.6-blt2.5', 'unicode-data', 'x11-common']
1m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--purge', 'python3-mp-api']
1m10.0s DUMP:
dpkg: warning: ignoring request to remove python3-mp-api which isn't installed
1m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--purge', 'python3-mp-api']
1m10.0s INFO: Running scripts post_purge
1m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_purge_exceptions']
1m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_purge_exceptions']
1m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_purge_manual_cleanup']
1m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_purge_manual_cleanup']
1m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--purge', '--pending']
1m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--purge', '--pending']
1m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--remove', '--pending']
1m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg', '--remove', '--pending']
1m10.0s INFO: Running scripts post_test
1m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_test_exceptions']
1m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'tmp/scripts/post_test_exceptions']
1m10.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
1m10.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
1m10.5s DEBUG: No broken symlinks as far as we can find.
1m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-divert', '--list']
1m10.5s DUMP:
local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged
local diversion of /home to /home.distrib
diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6
diversion of /libx32 to /.libx32.usr-is-merged by base-files
local diversion of /usr/bin/sync to /usr/bin/sync.distrib
diversion of /lib32 to /.lib32.usr-is-merged by base-files
diversion of /libo32 to /.libo32.usr-is-merged by base-files
1m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'dpkg-divert', '--list']
1m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'clean']
1m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpobmavas9', 'apt-get', 'clean']
1m10.5s DEBUG: Recording chroot state
1m11.9s INFO: PASS: Installation and purging test.
1m12.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/shm']
1m12.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/shm']
1m12.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/console']
1m12.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/console']
1m12.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/ptmx']
1m12.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/ptmx']
1m12.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/pts']
1m12.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/dev/pts']
1m12.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/proc']
1m12.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpobmavas9/proc']
1m12.1s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
1m12.2s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpobmavas9']
1m12.2s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpobmavas9
1m12.2s INFO: PASS: All tests.
1m12.2s INFO: piuparts run ends.
ret=0
End: 2025-04-09 10:37:22 GMT