Start: 2026-10-05 06:03:11 GMT Package: r-bioc-mofa2 Version: 1.22.1+dfsg-1 Installed-Size: 3105 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-api-4.0, r-api-bioc-3.23, r-bioc-rhdf5, r-cran-dplyr, r-cran-tidyr, r-cran-reshape2, r-cran-pheatmap, r-cran-ggplot2, r-cran-rcolorbrewer, r-cran-cowplot, r-cran-ggrepel, r-cran-reticulate, r-bioc-hdf5array, r-cran-magrittr, r-cran-forcats, r-cran-corrplot, r-bioc-delayedarray, r-cran-rtsne, r-cran-uwot, r-cran-stringi, r-pkg-team-core-architecture, python3 Suggests: r-cran-matrix Description: Multi-Omics Factor Analysis v2 Homepage: https://bioconductor.org/packages/MOFA2/ Description-md5: 6532ae5734e21bd743946ad79fd3ed08 Section: gnu-r Priority: optional Filename: pool/main/r/r-bioc-mofa2/r-bioc-mofa2_1.22.1+dfsg-1_all.deb Size: 2474668 MD5sum: d24a0bff0cababff64926252a301db1b SHA256: 4ef2972936a49ea1db0b588ca3bf1e6399d6b158b8d7ada686d15879569c65fd Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt r-bioc-mofa2=1.22.1+dfsg-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202608291514~1.6.0-23-g1172a6e5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --install-remove-install --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-others --scriptsdir /etc/piuparts/scripts-leftovers --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt r-bioc-mofa2=1.22.1+dfsg-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 6.12.111+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.111-1 (2026-09-28) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpr_fiz9mc 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpr_fiz9mc 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/pts'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/pts'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/7', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/7', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpr_fiz9mc/tmp/scripts/ 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts-leftovers to /srv/piuparts.debian.org/tmp/tmpr_fiz9mc/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'update'] 0m4.6s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [193 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.8 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7731 kB] Fetched 18.7 MB in 3s (5894 kB/s) Reading package lists... 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'update'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-yf', 'dist-upgrade'] 0m6.4s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: findutils libc-bin libc-gconv-modules-extra libc6 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4378 kB of archives. After this operation, 8192 B of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 findutils amd64 4.11.0-3 [788 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libc-gconv-modules-extra amd64 2.43-7 [1103 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libc6 amd64 2.43-7 [1866 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libc-bin amd64 2.43-7 [621 kB] Preconfiguring packages ... Fetched 4378 kB in 0s (30.4 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../findutils_4.11.0-3_amd64.deb ... Unpacking findutils (4.11.0-3) over (4.11.0-2) ... Setting up findutils (4.11.0-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../libc-gconv-modules-extra_2.43-7_amd64.deb ... Unpacking libc-gconv-modules-extra:amd64 (2.43-7) over (2.43-6) ... Setting up libc-gconv-modules-extra:amd64 (2.43-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../libc6_2.43-7_amd64.deb ... Unpacking libc6:amd64 (2.43-7) over (2.43-6) ... Setting up libc6:amd64 (2.43-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../libc-bin_2.43-7_amd64.deb ... Unpacking libc-bin (2.43-7) over (2.43-6) ... Setting up libc-bin (2.43-7) ... 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-yf', 'dist-upgrade'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.9s DUMP: 91d121e3aed8d451a9ecc26cabbedd4a - 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.9s INFO: Running scripts post_setup 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_dummy_users'] 0m7.8s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_dummy_users'] 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_fake-essential'] 0m9.5s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Reading state information... init-system-helpers is already the newest version (1.69+nmu3). Solving dependencies... The following additional packages will be installed: libncursesw6 libproc2-1 libtext-charwidth-perl libtext-wrapi18n-perl procps sensible-utils ucf Suggested packages: dbconfig-mariadb | dbconfig-pgsql | dbconfig-sqlite3 | dbconfig-no-thanks Recommended packages: libgpm2 psmisc linux-sysctl-defaults The following NEW packages will be installed: dbconfig-common libncursesw6 libproc2-1 libtext-charwidth-perl libtext-wrapi18n-perl procps sensible-utils ucf 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. Need to get 1917 kB of archives. After this operation, 5465 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.6+20260608-2 [137 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libproc2-1 amd64 2:4.0.7-1 [73.0 kB] Get:3 http://deb.debian.org/debian sid/main amd64 procps amd64 2:4.0.7-1 [989 kB] Get:4 http://deb.debian.org/debian sid/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libtext-charwidth-perl amd64 0.04-12+b1 [9344 B] Get:6 http://deb.debian.org/debian sid/main amd64 libtext-wrapi18n-perl all 0.06-11 [7788 B] Get:7 http://deb.debian.org/debian sid/main amd64 ucf all 3.0056 [47.1 kB] Get:8 http://deb.debian.org/debian sid/main amd64 dbconfig-common all 2.1.0 [627 kB] Preconfiguring packages ... Fetched 1917 kB in 0s (15.8 MB/s) Selecting previously unselected package libncursesw6:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4945 files and directories currently installed.) Preparing to unpack .../0-libncursesw6_6.6+20260608-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.6+20260608-2) ... Selecting previously unselected package libproc2-1:amd64. Preparing to unpack .../1-libproc2-1_2%3a4.0.7-1_amd64.deb ... Unpacking libproc2-1:amd64 (2:4.0.7-1) ... Selecting previously unselected package procps. Preparing to unpack .../2-procps_2%3a4.0.7-1_amd64.deb ... Unpacking procps (2:4.0.7-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../3-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libtext-charwidth-perl:amd64. Preparing to unpack .../4-libtext-charwidth-perl_0.04-12+b1_amd64.deb ... Unpacking libtext-charwidth-perl:amd64 (0.04-12+b1) ... Selecting previously unselected package libtext-wrapi18n-perl. Preparing to unpack .../5-libtext-wrapi18n-perl_0.06-11_all.deb ... Unpacking libtext-wrapi18n-perl (0.06-11) ... Selecting previously unselected package ucf. Preparing to unpack .../6-ucf_3.0056_all.deb ... Moving old data out of the way Unpacking ucf (3.0056) ... Selecting previously unselected package dbconfig-common. Preparing to unpack .../7-dbconfig-common_2.1.0_all.deb ... Unpacking dbconfig-common (2.1.0) ... Setting up libtext-charwidth-perl:amd64 (0.04-12+b1) ... Setting up libtext-wrapi18n-perl (0.06-11) ... Setting up libproc2-1:amd64 (2:4.0.7-1) ... Setting up libncursesw6:amd64 (6.6+20260608-2) ... Setting up sensible-utils (0.0.26) ... Setting up procps (2:4.0.7-1) ... Setting up ucf (3.0056) ... Setting up dbconfig-common (2.1.0) ... Creating config file /etc/dbconfig-common/config with new version Processing triggers for libc-bin (2.43-7) ... 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_fake-essential'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_forbid_home'] 0m9.5s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_forbid_home'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.5s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_minimize'] 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_minimize'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_zz_backports'] 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_setup_zz_backports'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'clean'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'clean'] 0m9.6s DEBUG: Recording chroot state 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m10.2s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed dbconfig-common dbconfig-common 2.1.0 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.11 install ok installed findutils findutils 4.11.0-3 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-3 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.2.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.2.1-1 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-7 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-7 install ok installed libc6:amd64 libc6 2.43-7 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-3 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libncursesw6:amd64 libncursesw6 6.6+20260608-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-3.1 install ok installed libproc2-1:amd64 libproc2-1 2:4.0.7-1 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b1 install ok installed libselinux1:amd64 libselinux1 3.11-2.1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b1 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libssl3t64:amd64 libssl3t64 3.6.5-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 262-1 install ok installed libtext-charwidth-perl:amd64 libtext-charwidth-perl 0.04-12+b1 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-11 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 262-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.2-2 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed mount mount 2.42.4-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.5-1 install ok installed passwd passwd 1:4.20.2-2 install ok installed perl-base perl-base 5.42.3-1 install ok installed procps procps 2:4.0.7-1 install ok installed sed sed 4.9-3 install ok installed sensible-utils sensible-utils 0.0.26 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-6 install ok installed tzdata tzdata 2026e-1 install ok installed ucf ucf 3.0056 install ok installed util-linux util-linux 2.42.4-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-divert', '--list'] 0m10.2s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-divert', '--list'] 0m10.2s INFO: Running scripts is_testable 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/is_testable_uninstallable'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/is_testable_uninstallable'] 0m10.2s INFO: apt-cache does not know about any of the requested packages 0m10.2s INFO: Running scripts pre_test 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_test_exceptions'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_test_exceptions'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_test_root_password'] 0m10.2s DUMP: New password: Retype new password: passwd: password updated successfully 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_test_root_password'] 0m10.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 0m10.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 0m11.1s DEBUG: No broken symlinks as far as we can find. 0m11.1s INFO: Running scripts pre_install 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_database-server'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_database-server'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_exceptions'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_exceptions'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_extras'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_extras'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'show', '--no-all-versions', 'r-bioc-mofa2=1.22.1+dfsg-1'] 0m12.3s DUMP: Package: r-bioc-mofa2 Version: 1.22.1+dfsg-1 Installed-Size: 3105 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-api-4.0, r-api-bioc-3.23, r-bioc-rhdf5, r-cran-dplyr, r-cran-tidyr, r-cran-reshape2, r-cran-pheatmap, r-cran-ggplot2, r-cran-rcolorbrewer, r-cran-cowplot, r-cran-ggrepel, r-cran-reticulate, r-bioc-hdf5array, r-cran-magrittr, r-cran-forcats, r-cran-corrplot, r-bioc-delayedarray, r-cran-rtsne, r-cran-uwot, r-cran-stringi, r-pkg-team-core-architecture, python3 Suggests: r-cran-matrix Description-en: Multi-Omics Factor Analysis v2 The MOFA2 package contains a collection of tools for training and analysing multi-omic factor analysis (MOFA). MOFA is a probabilistic factor model that aims to identify principal axes of variation from data sets that can comprise multiple omic layers and/or groups of samples. Additional time or space information on the samples can be incorporated using the MEFISTO framework, which is part of MOFA2. Downstream analysis functions to inspect molecular features underlying each factor, visualisation, imputation etc are available. Description-md5: 6532ae5734e21bd743946ad79fd3ed08 Homepage: https://bioconductor.org/packages/MOFA2/ Section: gnu-r Priority: optional Filename: pool/main/r/r-bioc-mofa2/r-bioc-mofa2_1.22.1+dfsg-1_all.deb Size: 2474668 MD5sum: d24a0bff0cababff64926252a301db1b SHA256: 4ef2972936a49ea1db0b588ca3bf1e6399d6b158b8d7ada686d15879569c65fd 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'show', '--no-all-versions', 'r-bioc-mofa2=1.22.1+dfsg-1'] 0m12.3s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Depends: r-api-4.0, r-api-bioc-3.23, r-bioc-rhdf5, r-cran-dplyr, r-cran-tidyr, r-cran-reshape2, r-cran-pheatmap, r-cran-ggplot2, r-cran-rcolorbrewer, r-cran-cowplot, r-cran-ggrepel, r-cran-reticulate, r-bioc-hdf5array, r-cran-magrittr, r-cran-forcats, r-cran-corrplot, r-bioc-delayedarray, r-cran-rtsne, r-cran-uwot, r-cran-stringi, r-pkg-team-core-architecture, python3 Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed 0m12.3s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmplr9hd95i/piuparts-depends-dummy'] 0m12.3s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmplr9hd95i/piuparts-depends-dummy.deb'. 0m12.3s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmplr9hd95i/piuparts-depends-dummy'] 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m12.3s DUMP: 3.3.3 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m12.3s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmplr9hd95i/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmpr_fiz9mc/tmp 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 1m30.2s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu build-essential bzip2 ca-certificates cmake cpp cpp-16 cpp-16-x86-64-linux-gnu cpp-x86-64-linux-gnu curl dpkg-dev fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++ g++-16 g++-16-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-16 gcc-16-x86-64-linux-gnu gcc-x86-64-linux-gnu git git-man libarchive13t64 libasan8 libatomic1 libbinutils libblas3 libblosc1 libboost-dev libboost1.90-dev libbrotli1 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcom-err2 libctf-nobfd0 libctf0 libcurl4-gnutls libcurl4t64 libdatrie1 libdeflate0 libdpkg-perl liberror-perl libevent-2.1-7t64 libexpat1 libffi-dev libffi8 libfontconfig1 libfreetype6 libfribidi0 libgcc-16-dev libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgfortran5 libglib2.0-0t64 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls28-dev libgnutls30t64 libgomp1 libgpg-error0 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhwasan0 libice6 libicu78 libidn2-0 libidn2-dev libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjsoncpp26 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap2 liblerc4 liblsan0 liblzma-dev libmpc3 libmpfr6 libncurses-dev libncurses6 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl0 libnspr4 libnspr4-dev libnss3 libnss3-dev libp11-kit-dev libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libperl5.42 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libquadmath0 libreadline-dev libreadline8t64 librhash1 libsasl2-2 libsasl2-modules-db libsframe3 libsharpyuv0 libsm6 libsnappy1v5 libsqlite3-0 libsqlite3-dev libssh2-1t64 libssl-dev libstdc++-16-dev libtasn1-6 libtasn1-6-dev libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libtsan2 libubsan1 libunbound8 libunistring5 libuv1t64 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2-16 libxml2-dev libxmlsec1-10310 libxmlsec1-dev libxmlsec1-gnutls10310 libxmlsec1-nss10310 libxmlsec1-openssl10310 libxrender1 libxslt1-dev libxslt1.1 libxss1 libxt6t64 linux-libc-dev make media-types netbase nettle-dev openssl patch perl perl-modules-5.42 pyenv pyenv-runtime python3 python3-minimal python3.14 python3.14-minimal r-base-core r-bioc-biocgenerics r-bioc-biocmake r-bioc-delayedarray r-bioc-dir.expiry r-bioc-h5mread r-bioc-hdf5array r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray r-bioc-xvector r-cran-abind r-cran-bh r-cran-cli r-cran-corrplot r-cran-cowplot r-cran-cpp11 r-cran-dplyr r-cran-dqrng r-cran-ellipsis r-cran-farver r-cran-filelock r-cran-fnn r-cran-forcats r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-glue r-cran-gtable r-cran-here r-cran-irlba r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-pheatmap r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-png r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcppeigen r-cran-rcppprogress r-cran-rcpptoml r-cran-reshape2 r-cran-reticulate r-cran-rlang r-cran-rprojroot r-cran-rspectra r-cran-rtsne r-cran-s7 r-cran-scales r-cran-sitmo r-cran-stringi r-cran-stringr r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-viridislite r-cran-withr r-pkg-team-core-architecture readline-common unzip wget x11-common xdg-utils xz-utils zip zlib1g-dev Suggested packages: binutils-doc gprofng-gui binutils-gold bzip2-doc cmake-doc cmake-format elpa-cmake-mode ninja-build cpp-doc gcc-16-locales cpp-16-doc debian-keyring debian-tag2upload-keyring g++-multilib g++-16-multilib gcc-16-doc gcc-multilib manpages-dev autoconf automake libtool flex bison gdb gcc-doc gcc-16-multilib gdb-x86-64-linux-gnu gettext-base git-doc git-email git-gui gitk gitweb git-cvs git-svn lrzip libboost-doc libboost1.90-doc libboost-atomic1.90-dev libboost-chrono1.90-dev libboost-container1.90-dev libboost-context1.90-dev libboost-contract1.90-dev libboost-coroutine1.90-dev libboost-date-time1.90-dev libboost-exception1.90-dev libboost-fiber1.90-dev libboost-filesystem1.90-dev libboost-graph-parallel1.90-dev libboost-graph1.90-dev libboost-iostreams1.90-dev libboost-json1.90-dev libboost-locale1.90-dev libboost-log1.90-dev libboost-math1.90-dev libboost-mpi-python1.90-dev libboost-mpi1.90-dev libboost-nowide1.90-dev libboost-numpy1.90-dev libboost-program-options1.90-dev libboost-python1.90-dev libboost-random1.90-dev libboost-regex1.90-dev libboost-serialization1.90-dev libboost-stacktrace1.90-dev libboost-test1.90-dev libboost-thread1.90-dev libboost-timer1.90-dev libboost-type-erasure1.90-dev libboost-url1.90-dev libboost-wave1.90-dev libboost1.90-tools-dev libmpfrc++-dev libntl-dev libc-devtools glibc-doc sq | sqop | rsop | gosop | hopenpgp-tools | pgpainless-cli | gpg-sq | gnupg bzr rng-tools gdbm-l10n low-memory-monitor gmp-doc libgmp10-doc libmpfr-dev dns-root-data gnutls-bin gnutls-doc krb5-doc krb5-user liblzma-doc ncurses-doc p11-kit-doc readline-doc sqlite3-doc libssl-doc libstdc++-16-doc tcl8.6 tk8.6 pkgconf make-doc ed diffutils-doc perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libsecret-1-dev python3-doc python3-tk python3-venv python3.14-venv python3.14-doc binfmt-support elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-getopt r-cran-inline Recommended packages: bash-completion fakeroot sq | sqop | rsop | gosop | hopenpgp-tools | pgpainless-cli | gpg-sq | gnupg libalgorithm-merge-perl less ssh-client bzip2-doc manpages manpages-dev libfile-fcntllock-perl liblocale-gettext-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n krb5-locales libldap-common libgpm2 publicsuffix libsasl2-modules libtasn1-doc llvm tk-dev r-recommended r-base-dev r-doc-html libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu build-essential bzip2 ca-certificates cmake cpp cpp-16 cpp-16-x86-64-linux-gnu cpp-x86-64-linux-gnu curl dpkg-dev fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++ g++-16 g++-16-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-16 gcc-16-x86-64-linux-gnu gcc-x86-64-linux-gnu git git-man libarchive13t64 libasan8 libatomic1 libbinutils libblas3 libblosc1 libboost-dev libboost1.90-dev libbrotli1 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcom-err2 libctf-nobfd0 libctf0 libcurl4-gnutls libcurl4t64 libdatrie1 libdeflate0 libdpkg-perl liberror-perl libevent-2.1-7t64 libexpat1 libffi-dev libffi8 libfontconfig1 libfreetype6 libfribidi0 libgcc-16-dev libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgfortran5 libglib2.0-0t64 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls28-dev libgnutls30t64 libgomp1 libgpg-error0 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhwasan0 libice6 libicu78 libidn2-0 libidn2-dev libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjsoncpp26 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap2 liblerc4 liblsan0 liblzma-dev libmpc3 libmpfr6 libncurses-dev libncurses6 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl0 libnspr4 libnspr4-dev libnss3 libnss3-dev libp11-kit-dev libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libperl5.42 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libquadmath0 libreadline-dev libreadline8t64 librhash1 libsasl2-2 libsasl2-modules-db libsframe3 libsharpyuv0 libsm6 libsnappy1v5 libsqlite3-0 libsqlite3-dev libssh2-1t64 libssl-dev libstdc++-16-dev libtasn1-6 libtasn1-6-dev libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libtsan2 libubsan1 libunbound8 libunistring5 libuv1t64 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2-16 libxml2-dev libxmlsec1-10310 libxmlsec1-dev libxmlsec1-gnutls10310 libxmlsec1-nss10310 libxmlsec1-openssl10310 libxrender1 libxslt1-dev libxslt1.1 libxss1 libxt6t64 linux-libc-dev make media-types netbase nettle-dev openssl patch perl perl-modules-5.42 piuparts-depends-dummy pyenv pyenv-runtime python3 python3-minimal python3.14 python3.14-minimal r-base-core r-bioc-biocgenerics r-bioc-biocmake r-bioc-delayedarray r-bioc-dir.expiry r-bioc-h5mread r-bioc-hdf5array r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray r-bioc-xvector r-cran-abind r-cran-bh r-cran-cli r-cran-corrplot r-cran-cowplot r-cran-cpp11 r-cran-dplyr r-cran-dqrng r-cran-ellipsis r-cran-farver r-cran-filelock r-cran-fnn r-cran-forcats r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-glue r-cran-gtable r-cran-here r-cran-irlba r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-pheatmap r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-png r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcppeigen r-cran-rcppprogress r-cran-rcpptoml r-cran-reshape2 r-cran-reticulate r-cran-rlang r-cran-rprojroot r-cran-rspectra r-cran-rtsne r-cran-s7 r-cran-scales r-cran-sitmo r-cran-stringi r-cran-stringr r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-viridislite r-cran-withr r-pkg-team-core-architecture readline-common unzip wget x11-common xdg-utils xz-utils zip zlib1g-dev 0 upgraded, 276 newly installed, 0 to remove and 0 not upgraded. Need to get 293 MB/293 MB of archives. After this operation, 1059 MB of additional disk space will be used. Get:1 /tmp/piuparts-depends-dummy.deb piuparts-depends-dummy all 0.invalid.0 [782 B] Get:2 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.8.5-2 [132 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libpython3.14-minimal amd64 3.14.8-1 [902 kB] Get:4 http://deb.debian.org/debian sid/main amd64 python3.14-minimal amd64 3.14.8-1 [2715 kB] Get:5 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.14.7-3 [25.3 kB] Get:6 http://deb.debian.org/debian sid/main amd64 media-types all 14.0.0 [30.8 kB] Get:7 http://deb.debian.org/debian sid/main amd64 netbase all 6.6 [10.3 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libffi8 amd64 3.8.0-2 [32.5 kB] Get:9 http://deb.debian.org/debian sid/main amd64 readline-common all 8.3-4 [74.8 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libreadline8t64 amd64 8.3-4 [181 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.53.4-2 [974 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libpython3.14-stdlib amd64 3.14.8-1 [2367 kB] Get:13 http://deb.debian.org/debian sid/main amd64 python3.14 amd64 3.14.8-1 [874 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.14.7-3 [8252 B] Get:15 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.14.7-3 [26.0 kB] Get:16 http://deb.debian.org/debian sid/main amd64 bzip2 amd64 1.0.8-6+b2 [40.4 kB] Get:17 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.6.5-1 [1554 kB] Get:18 http://deb.debian.org/debian sid/main amd64 ca-certificates all 20260816 [134 kB] Get:19 http://deb.debian.org/debian sid/main amd64 perl-modules-5.42 all 5.42.3-1 [3213 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libgdbm6t64 amd64 1.26-1+b2 [77.7 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libgdbm-compat4t64 amd64 1.26-1+b2 [52.0 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libperl5.42 amd64 5.42.3-1 [4272 kB] Get:23 http://deb.debian.org/debian sid/main amd64 perl amd64 5.42.3-1 [266 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libunistring5 amd64 1.4.2-1 [480 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libidn2-0 amd64 2.3.8-5 [109 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libp11-kit0 amd64 0.26.5-1 [482 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libtasn1-6 amd64 4.21.0-2+b1 [49.3 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libgnutls30t64 amd64 3.8.13-1 [1546 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libpsl5t64 amd64 0.23.3-1 [61.7 kB] Get:30 http://deb.debian.org/debian sid/main amd64 wget amd64 1.25.0-3 [985 kB] Get:31 http://deb.debian.org/debian sid/main amd64 xz-utils amd64 5.8.4-1 [761 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libsframe3 amd64 2.47-6 [86.2 kB] Get:33 http://deb.debian.org/debian sid/main amd64 binutils-common amd64 2.47-6 [2686 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libbinutils amd64 2.47-6 [562 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libgprofng0 amd64 2.47-6 [846 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libctf-nobfd0 amd64 2.47-6 [166 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libctf0 amd64 2.47-6 [98.2 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libjansson4 amd64 2.15.1-1 [65.6 kB] Get:39 http://deb.debian.org/debian sid/main amd64 binutils-x86-64-linux-gnu amd64 2.47-6 [1132 kB] Get:40 http://deb.debian.org/debian sid/main amd64 binutils amd64 2.47-6 [288 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libc-dev-bin amd64 2.43-7 [39.7 kB] Get:42 http://deb.debian.org/debian sid/main amd64 linux-libc-dev all 7.2.9-1 [2012 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libc6-dev amd64 2.43-7 [2069 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libisl23 amd64 0.28-1 [667 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libmpfr6 amd64 4.2.2-3 [729 kB] Get:46 http://deb.debian.org/debian sid/main amd64 libmpc3 amd64 1.3.1-3 [52.2 kB] Get:47 http://deb.debian.org/debian sid/main amd64 cpp-16-x86-64-linux-gnu amd64 16.2.0-3 [13.7 MB] Get:48 http://deb.debian.org/debian sid/main amd64 cpp-16 amd64 16.2.0-3 [1272 B] Get:49 http://deb.debian.org/debian sid/main amd64 cpp-x86-64-linux-gnu amd64 4:16.1.0-3 [4472 B] Get:50 http://deb.debian.org/debian sid/main amd64 cpp amd64 4:16.1.0-3 [1568 B] Get:51 http://deb.debian.org/debian sid/main amd64 libcc1-0 amd64 16.2.0-3 [46.1 kB] Get:52 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 16.2.0-3 [151 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libitm1 amd64 16.2.0-3 [26.9 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 16.2.0-3 [10.4 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libasan8 amd64 16.2.0-3 [2888 kB] Get:56 http://deb.debian.org/debian sid/main amd64 liblsan0 amd64 16.2.0-3 [1281 kB] Get:57 http://deb.debian.org/debian sid/main amd64 libtsan2 amd64 16.2.0-3 [2574 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libubsan1 amd64 16.2.0-3 [1136 kB] Get:59 http://deb.debian.org/debian sid/main amd64 libhwasan0 amd64 16.2.0-3 [1580 kB] Get:60 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 16.2.0-3 [148 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libgcc-16-dev amd64 16.2.0-3 [2782 kB] Get:62 http://deb.debian.org/debian sid/main amd64 gcc-16-x86-64-linux-gnu amd64 16.2.0-3 [26.6 MB] Get:63 http://deb.debian.org/debian sid/main amd64 gcc-16 amd64 16.2.0-3 [538 kB] Get:64 http://deb.debian.org/debian sid/main amd64 gcc-x86-64-linux-gnu amd64 4:16.1.0-3 [1432 B] Get:65 http://deb.debian.org/debian sid/main amd64 gcc amd64 4:16.1.0-3 [5148 B] Get:66 http://deb.debian.org/debian sid/main amd64 libstdc++-16-dev amd64 16.2.0-3 [2755 kB] Get:67 http://deb.debian.org/debian sid/main amd64 g++-16-x86-64-linux-gnu amd64 16.2.0-3 [15.1 MB] Get:68 http://deb.debian.org/debian sid/main amd64 g++-16 amd64 16.2.0-3 [35.4 kB] Get:69 http://deb.debian.org/debian sid/main amd64 g++-x86-64-linux-gnu amd64 4:16.1.0-3 [1196 B] Get:70 http://deb.debian.org/debian sid/main amd64 g++ amd64 4:16.1.0-3 [1340 B] Get:71 http://deb.debian.org/debian sid/main amd64 make amd64 4.4.1-3 [463 kB] Get:72 http://deb.debian.org/debian sid/main amd64 libdpkg-perl all 1.23.11 [650 kB] Get:73 http://deb.debian.org/debian sid/main amd64 patch amd64 2.8-2 [134 kB] Get:74 http://deb.debian.org/debian sid/main amd64 dpkg-dev all 1.23.11 [1005 kB] Get:75 http://deb.debian.org/debian sid/main amd64 build-essential amd64 12.12 [4624 B] Get:76 http://deb.debian.org/debian sid/main amd64 libxml2-16 amd64 2.15.4+dfsg-1 [683 kB] Get:77 http://deb.debian.org/debian sid/main amd64 libarchive13t64 amd64 3.8.9-1 [364 kB] Get:78 http://deb.debian.org/debian sid/main amd64 libnghttp3-9 amd64 1.17.0-1 [68.1 kB] Get:79 http://deb.debian.org/debian sid/main amd64 libngtcp2-16 amd64 1.24.0-1 [145 kB] Get:80 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.2.0-4+b1 [312 kB] Get:81 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.22.1-3 [31.1 kB] Get:82 http://deb.debian.org/debian sid/main amd64 libcom-err2 amd64 1.47.4-1+b2 [19.5 kB] Get:83 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.22.1-3 [79.0 kB] Get:84 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-6+b2 [9348 B] Get:85 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.22.1-3 [335 kB] Get:86 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.22.1-3 [137 kB] Get:87 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-11 [17.2 kB] Get:88 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-11 [55.2 kB] Get:89 http://deb.debian.org/debian sid/main amd64 libldap2 amd64 2.6.14+dfsg-2 [200 kB] Get:90 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.70.0-1 [92.7 kB] Get:91 http://deb.debian.org/debian sid/main amd64 libngtcp2-crypto-ossl0 amd64 1.24.0-1 [26.5 kB] Get:92 http://deb.debian.org/debian sid/main amd64 libssh2-1t64 amd64 1.11.1-6 [253 kB] Get:93 http://deb.debian.org/debian sid/main amd64 libcurl4t64 amd64 8.23.0~rc2-1 [467 kB] Get:94 http://deb.debian.org/debian sid/main amd64 libjsoncpp26 amd64 1.9.8-2 [87.5 kB] Get:95 http://deb.debian.org/debian sid/main amd64 librhash1 amd64 1.4.6-1.1+b1 [135 kB] Get:96 http://deb.debian.org/debian sid/main amd64 libuv1t64 amd64 1.52.1-4 [158 kB] Get:97 http://deb.debian.org/debian sid/main amd64 cmake amd64 4.3.4-1 [16.2 MB] Get:98 http://deb.debian.org/debian sid/main amd64 curl amd64 8.23.0~rc2-1 [292 kB] Get:99 http://deb.debian.org/debian sid/main amd64 libpng16-16t64 amd64 1.6.59-1 [293 kB] Get:100 http://deb.debian.org/debian sid/main amd64 libfreetype6 amd64 2.14.3+dfsg-2 [492 kB] Get:101 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-mono all 2.37-9 [488 kB] Get:102 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-core all 2.37-9 [840 kB] Get:103 http://deb.debian.org/debian sid/main amd64 fontconfig-config amd64 2.17.1-5 [56.1 kB] Get:104 http://deb.debian.org/debian sid/main amd64 libfontconfig1 amd64 2.17.1-5 [132 kB] Get:105 http://deb.debian.org/debian sid/main amd64 fontconfig amd64 2.17.1-5 [191 kB] Get:106 http://deb.debian.org/debian sid/main amd64 libngtcp2-crypto-gnutls8 amd64 1.24.0-1 [23.9 kB] Get:107 http://deb.debian.org/debian sid/main amd64 libcurl4-gnutls amd64 8.23.0~rc2-1 [463 kB] Get:108 http://deb.debian.org/debian sid/main amd64 liberror-perl all 0.17030-1 [26.9 kB] Get:109 http://deb.debian.org/debian sid/main amd64 git-man all 1:2.55.0-1 [2381 kB] Get:110 http://deb.debian.org/debian sid/main amd64 git amd64 1:2.55.0-1 [9658 kB] Get:111 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.12.1-8 [206 kB] Get:112 http://deb.debian.org/debian sid/main amd64 libsnappy1v5 amd64 1.3.1-3 [32.1 kB] Get:113 http://deb.debian.org/debian sid/main amd64 libblosc1 amd64 1.21.5+ds-2+b2 [48.0 kB] Get:114 http://deb.debian.org/debian sid/main amd64 libboost1.90-dev amd64 1.90.0-6.1+b1 [11.3 MB] Get:115 http://deb.debian.org/debian sid/main amd64 libboost-dev amd64 1.90.0.2+nmu1 [3200 B] Get:116 http://deb.debian.org/debian sid/main amd64 libbz2-dev amd64 1.0.8-6+b2 [33.6 kB] Get:117 http://deb.debian.org/debian sid/main amd64 libpixman-1-0 amd64 0.46.4-1+b2 [259 kB] Get:118 http://deb.debian.org/debian sid/main amd64 libxau6 amd64 1:1.0.11-1+b2 [20.7 kB] Get:119 http://deb.debian.org/debian sid/main amd64 libxdmcp6 amd64 1:1.1.5-2+b1 [28.2 kB] Get:120 http://deb.debian.org/debian sid/main amd64 libxcb1 amd64 1.17.0-2+b2 [144 kB] Get:121 http://deb.debian.org/debian sid/main amd64 libx11-data all 2:1.8.13-1 [346 kB] Get:122 http://deb.debian.org/debian sid/main amd64 libx11-6 amd64 2:1.8.13-1 [829 kB] Get:123 http://deb.debian.org/debian sid/main amd64 libxcb-render0 amd64 1.17.0-2+b2 [115 kB] Get:124 http://deb.debian.org/debian sid/main amd64 libxcb-shm0 amd64 1.17.0-2+b2 [105 kB] Get:125 http://deb.debian.org/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b4 [50.7 kB] Get:126 http://deb.debian.org/debian sid/main amd64 libxrender1 amd64 1:0.9.12-1+b2 [27.7 kB] Get:127 http://deb.debian.org/debian sid/main amd64 libcairo2 amd64 1.18.4-3+b1 [543 kB] Get:128 http://deb.debian.org/debian sid/main amd64 libdatrie1 amd64 0.2.14-2 [39.1 kB] Get:129 http://deb.debian.org/debian sid/main amd64 libdeflate0 amd64 1.25-1 [48.0 kB] Get:130 http://deb.debian.org/debian sid/main amd64 libevent-2.1-7t64 amd64 2.1.13-stable-1 [183 kB] Get:131 http://deb.debian.org/debian sid/main amd64 libffi-dev amd64 3.8.0-2 [79.2 kB] Get:132 http://deb.debian.org/debian sid/main amd64 libfribidi0 amd64 1.0.16-5+b1 [26.2 kB] Get:133 http://deb.debian.org/debian sid/main amd64 libgpg-error0 amd64 1.61-5 [93.1 kB] Get:134 http://deb.debian.org/debian sid/main amd64 libgcrypt20 amd64 1.12.4-2 [936 kB] Get:135 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 16.2.0-3 [879 kB] Get:136 http://deb.debian.org/debian sid/main amd64 libglib2.0-0t64 amd64 2.90.0-1 [1618 kB] Get:137 http://deb.debian.org/debian sid/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5+b2 [328 kB] Get:138 http://deb.debian.org/debian sid/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5+b2 [641 kB] Get:139 http://deb.debian.org/debian sid/main amd64 libunbound8 amd64 1.26.1-1 [664 kB] Get:140 http://deb.debian.org/debian sid/main amd64 libgnutls-dane0t64 amd64 3.8.13-1 [496 kB] Get:141 http://deb.debian.org/debian sid/main amd64 libidn2-dev amd64 2.3.8-5 [102 kB] Get:142 http://deb.debian.org/debian sid/main amd64 libp11-kit-dev amd64 0.26.5-1 [226 kB] Get:143 http://deb.debian.org/debian sid/main amd64 libtasn1-6-dev amd64 4.21.0-2+b1 [98.6 kB] Get:144 http://deb.debian.org/debian sid/main amd64 nettle-dev amd64 3.10.2-1+b1 [1321 kB] Get:145 http://deb.debian.org/debian sid/main amd64 libgnutls28-dev amd64 3.8.13-1 [1479 kB] Get:146 http://deb.debian.org/debian sid/main amd64 libgraphite2-3 amd64 1.3.15-2 [75.8 kB] Get:147 http://deb.debian.org/debian sid/main amd64 libharfbuzz0b amd64 12.3.2-2+b2 [513 kB] Get:148 http://deb.debian.org/debian sid/main amd64 x11-common all 1:7.7+26 [217 kB] Get:149 http://deb.debian.org/debian sid/main amd64 libice6 amd64 2:1.1.1-1+b2 [66.8 kB] Get:150 http://deb.debian.org/debian sid/main amd64 libicu78 amd64 78.3-2 [10.0 MB] Get:151 http://deb.debian.org/debian sid/main amd64 libjbig0 amd64 2.1-6.1+b3 [32.2 kB] Get:152 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo amd64 1:3.1.3-4 [213 kB] Get:153 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.12.1-8 [2548 kB] Get:154 http://deb.debian.org/debian sid/main amd64 liblerc4 amd64 4.2.0+ds-1 [203 kB] Get:155 http://deb.debian.org/debian sid/main amd64 liblzma-dev amd64 5.8.4-1 [391 kB] Get:156 http://deb.debian.org/debian sid/main amd64 libncurses6 amd64 6.6+20260608-2 [107 kB] Get:157 http://deb.debian.org/debian sid/main amd64 libncurses-dev amd64 6.6+20260608-2 [356 kB] Get:158 http://deb.debian.org/debian sid/main amd64 libnspr4 amd64 2:4.40-1 [116 kB] Get:159 http://deb.debian.org/debian sid/main amd64 libnspr4-dev amd64 2:4.40-1 [212 kB] Get:160 http://deb.debian.org/debian sid/main amd64 libnss3 amd64 2:3.130-1 [1555 kB] Get:161 http://deb.debian.org/debian sid/main amd64 libnss3-dev amd64 2:3.130-1 [211 kB] Get:162 http://deb.debian.org/debian sid/main amd64 libthai-data all 0.1.30-3 [172 kB] Get:163 http://deb.debian.org/debian sid/main amd64 libthai0 amd64 0.1.30-3 [51.7 kB] Get:164 http://deb.debian.org/debian sid/main amd64 libpango-1.0-0 amd64 1.58.2-1 [233 kB] Get:165 http://deb.debian.org/debian sid/main amd64 libpangoft2-1.0-0 amd64 1.58.2-1 [56.0 kB] Get:166 http://deb.debian.org/debian sid/main amd64 libpangocairo-1.0-0 amd64 1.58.2-1 [35.3 kB] Get:167 http://deb.debian.org/debian sid/main amd64 libpaper2 amd64 2.2.5-0.4 [16.6 kB] Get:168 http://deb.debian.org/debian sid/main amd64 libpaper-utils amd64 2.2.5-0.4 [15.8 kB] Get:169 http://deb.debian.org/debian sid/main amd64 libreadline-dev amd64 8.3-4 [163 kB] Get:170 http://deb.debian.org/debian sid/main amd64 libsharpyuv0 amd64 1.6.0-0.1 [116 kB] Get:171 http://deb.debian.org/debian sid/main amd64 libsm6 amd64 2:1.2.6-1+b2 [37.9 kB] Get:172 http://deb.debian.org/debian sid/main amd64 libsqlite3-dev amd64 3.53.4-2 [1166 kB] Get:173 http://deb.debian.org/debian sid/main amd64 libssl-dev amd64 3.6.5-1 [3165 kB] Get:174 http://deb.debian.org/debian sid/main amd64 libtcl8.6 amd64 8.6.18+dfsg-1 [1053 kB] Get:175 http://deb.debian.org/debian sid/main amd64 libwebp7 amd64 1.6.0-0.1 [349 kB] Get:176 http://deb.debian.org/debian sid/main amd64 libtiff6 amd64 4.7.2-1 [383 kB] Get:177 http://deb.debian.org/debian sid/main amd64 libtirpc-common all 1.3.7+ds-1 [10.0 kB] Get:178 http://deb.debian.org/debian sid/main amd64 libtirpc3t64 amd64 1.3.7+ds-1 [82.9 kB] Get:179 http://deb.debian.org/debian sid/main amd64 libxft2 amd64 2.3.6-1+b5 [54.8 kB] Get:180 http://deb.debian.org/debian sid/main amd64 libxss1 amd64 1:1.2.3-1+b4 [17.0 kB] Get:181 http://deb.debian.org/debian sid/main amd64 libtk8.6 amd64 8.6.18-1 [801 kB] Get:182 http://deb.debian.org/debian sid/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.2-3 [918 kB] Get:183 http://deb.debian.org/debian sid/main amd64 libxml2-dev amd64 2.15.4+dfsg-1 [794 kB] Get:184 http://deb.debian.org/debian sid/main amd64 libxslt1.1 amd64 1.1.45-0.1 [158 kB] Get:185 http://deb.debian.org/debian sid/main amd64 libxmlsec1-10310 amd64 1.3.10-2 [165 kB] Get:186 http://deb.debian.org/debian sid/main amd64 libxmlsec1-gnutls10310 amd64 1.3.10-2 [89.1 kB] Get:187 http://deb.debian.org/debian sid/main amd64 libxmlsec1-nss10310 amd64 1.3.10-2 [89.1 kB] Get:188 http://deb.debian.org/debian sid/main amd64 libxmlsec1-openssl10310 amd64 1.3.10-2 [111 kB] Get:189 http://deb.debian.org/debian sid/main amd64 libxslt1-dev amd64 1.1.45-0.1 [119 kB] Get:190 http://deb.debian.org/debian sid/main amd64 libxmlsec1-dev amd64 1.3.10-2 [495 kB] Get:191 http://deb.debian.org/debian sid/main amd64 libxt6t64 amd64 1:1.2.1-1.3+b2 [191 kB] Get:192 http://deb.debian.org/debian sid/main amd64 pyenv-runtime all 2.7.1-1 [46.6 kB] Get:193 http://deb.debian.org/debian sid/main amd64 pyenv all 2.7.1-1 [388 kB] Get:194 http://deb.debian.org/debian sid/main amd64 zip amd64 3.0-16 [239 kB] Get:195 http://deb.debian.org/debian sid/main amd64 unzip amd64 6.0-31 [176 kB] Get:196 http://deb.debian.org/debian sid/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] Get:197 http://deb.debian.org/debian sid/main amd64 r-base-core amd64 4.6.1-6 [28.4 MB] Get:198 http://deb.debian.org/debian sid/main amd64 r-cran-generics all 0.1.4-1 [84.2 kB] Get:199 http://deb.debian.org/debian sid/main amd64 r-pkg-team-core-architecture amd64 20260707 [4764 B] Get:200 http://deb.debian.org/debian sid/main amd64 r-bioc-biocgenerics all 0.58.1-1 [649 kB] Get:201 http://deb.debian.org/debian sid/main amd64 r-cran-filelock amd64 1.0.3-2 [27.9 kB] Get:202 http://deb.debian.org/debian sid/main amd64 r-bioc-dir.expiry all 1.20.0+dfsg-1 [32.5 kB] Get:203 http://deb.debian.org/debian sid/main amd64 r-bioc-biocmake all 1.4.0+dfsg-1 [36.6 kB] Get:204 http://deb.debian.org/debian sid/main amd64 r-cran-lattice amd64 0.23-1-1 [1457 kB] Get:205 http://deb.debian.org/debian sid/main amd64 r-cran-matrix amd64 1.7-6-1 [4192 kB] Get:206 http://deb.debian.org/debian sid/main amd64 r-cran-matrixstats amd64 1.5.0-3 [503 kB] Get:207 http://deb.debian.org/debian sid/main amd64 r-bioc-matrixgenerics all 1.24.0-1 [444 kB] Get:208 http://deb.debian.org/debian sid/main amd64 r-bioc-s4vectors amd64 0.50.3+dfsg-1 [1851 kB] Get:209 http://deb.debian.org/debian sid/main amd64 r-bioc-iranges amd64 2.46.0-1 [2336 kB] Get:210 http://deb.debian.org/debian sid/main amd64 r-cran-abind all 1.4-8-1 [68.1 kB] Get:211 http://deb.debian.org/debian sid/main amd64 r-bioc-s4arrays amd64 1.12.1+dfsg-1 [846 kB] Get:212 http://deb.debian.org/debian sid/main amd64 r-bioc-xvector amd64 0.52.0-1 [629 kB] Get:213 http://deb.debian.org/debian sid/main amd64 r-bioc-sparsearray amd64 1.12.3+dfsg-1 [1386 kB] Get:214 http://deb.debian.org/debian sid/main amd64 r-bioc-delayedarray all 0.38.2+dfsg-1 [1999 kB] Get:215 http://deb.debian.org/debian sid/main amd64 r-bioc-rhdf5lib amd64 2.0.0+dfsg2-1 [2719 kB] Get:216 http://deb.debian.org/debian sid/main amd64 r-bioc-rhdf5filters amd64 1.24.1+dfsg-1 [142 kB] Get:217 http://deb.debian.org/debian sid/main amd64 r-bioc-rhdf5 amd64 2.56.1+dfsg-1 [2507 kB] Get:218 http://deb.debian.org/debian sid/main amd64 r-bioc-h5mread amd64 1.4.1+dfsg-1 [4351 kB] Get:219 http://deb.debian.org/debian sid/main amd64 r-bioc-hdf5array all 1.40.0-1 [8882 kB] Get:220 http://deb.debian.org/debian sid/main amd64 r-cran-bh all 1.90.0-1 [6220 B] Get:221 http://deb.debian.org/debian sid/main amd64 r-cran-cli amd64 3.6.6-1 [1391 kB] Get:222 http://deb.debian.org/debian sid/main amd64 r-cran-corrplot all 0.95-2 [134 kB] Get:223 http://deb.debian.org/debian sid/main amd64 r-cran-glue amd64 1.8.1-2 [172 kB] Get:224 http://deb.debian.org/debian sid/main amd64 r-cran-rlang amd64 1.3.0-1 [1742 kB] Get:225 http://deb.debian.org/debian sid/main amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] Get:226 http://deb.debian.org/debian sid/main amd64 r-cran-gtable all 0.3.6+dfsg-2 [228 kB] Get:227 http://deb.debian.org/debian sid/main amd64 r-cran-cpp11 all 0.5.5-1 [236 kB] Get:228 http://deb.debian.org/debian sid/main amd64 r-cran-isoband amd64 0.3.0-1 [1644 kB] Get:229 http://deb.debian.org/debian sid/main amd64 r-cran-s7 amd64 0.2.2-1 [331 kB] Get:230 http://deb.debian.org/debian sid/main amd64 r-cran-farver amd64 2.1.2-3 [1414 kB] Get:231 http://deb.debian.org/debian sid/main amd64 r-cran-labeling all 0.4.3-2 [63.2 kB] Get:232 http://deb.debian.org/debian sid/main amd64 r-cran-r6 all 2.6.1-2 [106 kB] Get:233 http://deb.debian.org/debian sid/main amd64 r-cran-rcolorbrewer all 1.1-3-2 [54.0 kB] Get:234 http://deb.debian.org/debian sid/main amd64 r-cran-viridislite all 0.4.3-1 [1299 kB] Get:235 http://deb.debian.org/debian sid/main amd64 r-cran-scales all 1.4.0-1 [800 kB] Get:236 http://deb.debian.org/debian sid/main amd64 r-cran-vctrs amd64 0.7.3-2 [1983 kB] Get:237 http://deb.debian.org/debian sid/main amd64 r-cran-withr all 3.0.3+dfsg-1 [229 kB] Get:238 http://deb.debian.org/debian sid/main amd64 r-cran-ggplot2 all 4.0.3+dfsg-1 [4923 kB] Get:239 http://deb.debian.org/debian sid/main amd64 r-cran-cowplot all 1.2.0+dfsg-1 [653 kB] Get:240 http://deb.debian.org/debian sid/main amd64 r-cran-magrittr amd64 2.0.5-1 [209 kB] Get:241 http://deb.debian.org/debian sid/main amd64 r-cran-utf8 amd64 1.2.6-2 [138 kB] Get:242 http://deb.debian.org/debian sid/main amd64 r-cran-pillar all 1.11.1+dfsg-1 [457 kB] Get:243 http://deb.debian.org/debian sid/main amd64 r-cran-pkgconfig all 2.0.3-3 [21.7 kB] Get:244 http://deb.debian.org/debian sid/main amd64 r-cran-tibble amd64 3.3.1+dfsg-2 [452 kB] Get:245 http://deb.debian.org/debian sid/main amd64 r-cran-tidyselect amd64 1.2.1+dfsg-3 [224 kB] Get:246 http://deb.debian.org/debian sid/main amd64 r-cran-dplyr amd64 1.2.1-2 [1574 kB] Get:247 http://deb.debian.org/debian sid/main amd64 r-cran-littler amd64 0.3.23-1 [96.5 kB] Get:248 http://deb.debian.org/debian sid/main amd64 r-cran-pkgkitten all 0.2.4-1 [29.1 kB] Get:249 http://deb.debian.org/debian sid/main amd64 r-cran-rcpp amd64 1.1.2-1 [2168 kB] Get:250 http://deb.debian.org/debian sid/main amd64 r-cran-sitmo amd64 2.0.2-2 [130 kB] Get:251 http://deb.debian.org/debian sid/main amd64 r-cran-dqrng amd64 0.3.2+dfsg-2 [135 kB] Get:252 http://deb.debian.org/debian sid/main amd64 r-cran-ellipsis amd64 0.3.3-1 [26.5 kB] Get:253 http://deb.debian.org/debian sid/main amd64 r-cran-fnn amd64 1.1.4.1-2 [125 kB] Get:254 http://deb.debian.org/debian sid/main amd64 r-cran-forcats all 1.0.1-1 [413 kB] Get:255 http://deb.debian.org/debian sid/main amd64 r-cran-ggrepel amd64 0.9.8-1 [340 kB] Get:256 http://deb.debian.org/debian sid/main amd64 r-cran-rprojroot all 2.1.1-3 [134 kB] Get:257 http://deb.debian.org/debian sid/main amd64 r-cran-here all 1.0.2-1 [50.2 kB] Get:258 http://deb.debian.org/debian sid/main amd64 r-cran-irlba amd64 2.3.7-1 [451 kB] Get:259 http://deb.debian.org/debian sid/main amd64 r-cran-jsonlite amd64 2.0.0+dfsg-2 [447 kB] Get:260 http://deb.debian.org/debian sid/main amd64 r-cran-pheatmap all 1.0.13-1 [80.1 kB] Get:261 http://deb.debian.org/debian sid/main amd64 r-cran-plyr amd64 1.8.9-2 [792 kB] Get:262 http://deb.debian.org/debian sid/main amd64 r-cran-png amd64 0.1-9-1 [42.9 kB] Get:263 http://deb.debian.org/debian sid/main amd64 r-cran-purrr amd64 1.2.2-1 [575 kB] Get:264 http://deb.debian.org/debian sid/main amd64 r-cran-rappdirs amd64 0.3.4-2 [50.4 kB] Get:265 http://deb.debian.org/debian sid/main amd64 r-cran-rcppannoy amd64 0.0.23-1 [267 kB] Get:266 http://deb.debian.org/debian sid/main amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1411 kB] Get:267 http://deb.debian.org/debian sid/main amd64 r-cran-rcppprogress all 0.4.2-3 [22.5 kB] Get:268 http://deb.debian.org/debian sid/main amd64 r-cran-rcpptoml amd64 0.2.3+dfsg-3 [117 kB] Get:269 http://deb.debian.org/debian sid/main amd64 r-cran-stringi amd64 1.8.9-1 [906 kB] Get:270 http://deb.debian.org/debian sid/main amd64 r-cran-stringr all 1.6.0-1 [323 kB] Get:271 http://deb.debian.org/debian sid/main amd64 r-cran-reshape2 amd64 1.4.5-1 [120 kB] Get:272 http://deb.debian.org/debian sid/main amd64 r-cran-reticulate amd64 1.47.0+dfsg-1 [1631 kB] Get:273 http://deb.debian.org/debian sid/main amd64 r-cran-rspectra amd64 0.16-2-2 [427 kB] Get:274 http://deb.debian.org/debian sid/main amd64 r-cran-rtsne amd64 0.17-2 [106 kB] Get:275 http://deb.debian.org/debian sid/main amd64 r-cran-tidyr amd64 1.3.2-3 [1163 kB] Get:276 http://deb.debian.org/debian sid/main amd64 r-cran-uwot amd64 0.2.5-1 [984 kB] Preconfiguring packages ... Fetched 293 MB in 45s (6456 kB/s) Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5486 files and directories currently installed.) Preparing to unpack .../libexpat1_2.8.5-2_amd64.deb ... Unpacking libexpat1:amd64 (2.8.5-2) ... Selecting previously unselected package libpython3.14-minimal:amd64. Preparing to unpack .../libpython3.14-minimal_3.14.8-1_amd64.deb ... Unpacking libpython3.14-minimal:amd64 (3.14.8-1) ... Selecting previously unselected package python3.14-minimal. Preparing to unpack .../python3.14-minimal_3.14.8-1_amd64.deb ... Unpacking python3.14-minimal (3.14.8-1) ... Setting up libpython3.14-minimal:amd64 (3.14.8-1) ... Setting up libexpat1:amd64 (2.8.5-2) ... Setting up python3.14-minimal (3.14.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5842 files and directories currently installed.) 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../6-libsqlite3-0_3.53.4-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.53.4-2) ... Selecting previously unselected package libpython3.14-stdlib:amd64. Preparing to unpack .../7-libpython3.14-stdlib_3.14.8-1_amd64.deb ... Unpacking libpython3.14-stdlib:amd64 (3.14.8-1) ... Selecting previously unselected package python3.14. 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Setting up pyenv-runtime (2.7.1-1) ... Setting up libdatrie1:amd64 (0.2.14-2) ... Setting up libgdbm-compat4t64:amd64 (1.26-1+b2) ... Setting up libxcb-render0:amd64 (1.17.0-2+b2) ... Setting up libxml2-16:amd64 (2.15.4+dfsg-1) ... Setting up libtirpc-common (1.3.7+ds-1) ... Setting up unzip (6.0-31) ... Setting up libbrotli1:amd64 (1.2.0-4+b1) ... Setting up libsqlite3-0:amd64 (3.53.4-2) ... Setting up libuv1t64:amd64 (1.52.1-4) ... Setting up binutils-common:amd64 (2.47-6) ... Setting up x11-common (1:7.7+26) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libnghttp2-14:amd64 (1.70.0-1) ... Setting up libsframe3:amd64 (2.47-6) ... Setting up libdeflate0:amd64 (1.25-1) ... Setting up linux-libc-dev (7.2.9-1) ... Setting up libctf-nobfd0:amd64 (2.47-6) ... Setting up libevent-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up libgcrypt20:amd64 (1.12.4-2) ... Setting up libxcb-shm0:amd64 (1.17.0-2+b2) ... Setting up libcom-err2:amd64 (1.47.4-1+b2) ... Setting up libgomp1:amd64 (16.2.0-3) ... Setting up bzip2 (1.0.8-6+b2) ... Setting up libjbig0:amd64 (2.1-6.1+b3) ... Setting up libjansson4:amd64 (2.15.1-1) ... Setting up libsnappy1v5:amd64 (1.3.1-3) ... Setting up libkrb5support0:amd64 (1.22.1-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-11) ... Setting up libicu78:amd64 (78.3-2) ... Setting up zip (3.0-16) ... Setting up libblas3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libunbound8:amd64 (1.26.1-1) ... Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5+b2) ... Setting up libjpeg62-turbo:amd64 (1:3.1.3-4) ... Setting up libx11-data (2:1.8.13-1) ... Setting up make (4.4.1-3) ... Setting up libmpfr6:amd64 (4.2.2-3) ... Setting up libnspr4:amd64 (2:4.40-1) ... Setting up libjsoncpp26:amd64 (1.9.8-2) ... Setting up libncurses6:amd64 (6.6+20260608-2) ... Setting up xz-utils (5.8.4-1) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode Setting up libfribidi0:amd64 (1.0.16-5+b1) ... Setting up libquadmath0:amd64 (16.2.0-3) ... Setting up libunistring5:amd64 (1.4.2-1) ... Setting up fonts-dejavu-mono (2.37-9) ... Setting up libssl-dev:amd64 (3.6.5-1) ... Setting up r-pkg-team-core-architecture (20260707) ... Setting up libpng16-16t64:amd64 (1.6.59-1) ... Setting up libmpc3:amd64 (1.3.1-3) ... Setting up libatomic1:amd64 (16.2.0-3) ... Setting up patch (2.8-2) ... Setting up libtcl8.6:amd64 (8.6.18+dfsg-1) ... Setting up fonts-dejavu-core (2.37-9) ... Setting up libk5crypto3:amd64 (1.22.1-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-11) ... Setting up libgfortran5:amd64 (16.2.0-3) ... Setting up libnghttp3-9:amd64 (1.17.0-1) ... Setting up libwebp7:amd64 (1.6.0-0.1) ... Setting up liblzma-dev:amd64 (5.8.4-1) ... Setting up libubsan1:amd64 (16.2.0-3) ... Setting up libffi8:amd64 (3.8.0-2) ... Setting up libhwasan0:amd64 (16.2.0-3) ... Setting up libtiff6:amd64 (4.7.2-1) ... Setting up libasan8:amd64 (16.2.0-3) ... Setting up libxslt1.1:amd64 (1.1.45-0.1) ... Setting up libblosc1:amd64 (1.21.5+ds-2+b2) ... Setting up libtasn1-6:amd64 (4.21.0-2+b1) ... Setting up git-man (1:2.55.0-1) ... Setting up libx11-6:amd64 (2:1.8.13-1) ... Setting up libthai-data (0.1.30-3) ... Setting up netbase (6.6) ... Setting up libngtcp2-16:amd64 (1.24.0-1) ... Setting up librhash1:amd64 (1.4.6-1.1+b1) ... Setting up libkrb5-3:amd64 (1.22.1-3) ... Setting up libpaper2:amd64 (2.2.5-0.4) ... Setting up libssh2-1t64:amd64 (1.11.1-6) ... Setting up libtsan2:amd64 (16.2.0-3) ... Setting up libbinutils:amd64 (2.47-6) ... Setting up perl-modules-5.42 (5.42.3-1) ... Setting up libisl23:amd64 (0.28-1) ... Setting up libc-dev-bin (2.43-7) ... Setting up libtasn1-6-dev:amd64 (4.21.0-2+b1) ... Setting up openssl (3.6.5-1) ... Setting up libarchive13t64:amd64 (3.8.9-1) ... Setting up readline-common (8.3-4) ... Setting up xdg-utils (1.2.1-2) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libcc1-0:amd64 (16.2.0-3) ... Setting up libldap2:amd64 (2.6.14+dfsg-2) ... Setting up liblsan0:amd64 (16.2.0-3) ... Setting up libitm1:amd64 (16.2.0-3) ... Setting up libctf0:amd64 (2.47-6) ... Setting up libnspr4-dev (2:4.40-1) ... Setting up libice6:amd64 (2:1.1.1-1+b2) ... Setting up liblapack3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-5+b2) ... Setting up nettle-dev:amd64 (3.10.2-1+b1) ... Setting up libxrender1:amd64 (1:0.9.12-1+b2) ... Setting up libgcc-16-dev:amd64 (16.2.0-3) ... Setting up fontconfig-config (2.17.1-5) ... Setting up libxext6:amd64 (2:1.3.4-1+b4) ... Setting up libidn2-0:amd64 (2.3.8-5) ... Setting up libnss3:amd64 (2:3.130-1) ... Setting up libperl5.42:amd64 (5.42.3-1) ... Setting up libpaper-utils (2.2.5-0.4) ... Setting up libffi-dev:amd64 (3.8.0-2) ... Setting up libxmlsec1-10310:amd64 (1.3.10-2) ... Setting up libthai0:amd64 (0.1.30-3) ... Setting up ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 121 added, 0 removed; done. Setting up perl (5.42.3-1) ... Setting up libglib2.0-0t64:amd64 (2.90.0-1) ... No schema files found: doing nothing. Setting up libgprofng0:amd64 (2.47-6) ... Setting up libfreetype6:amd64 (2.14.3+dfsg-2) ... Setting up libp11-kit0:amd64 (0.26.5-1) ... Setting up libgssapi-krb5-2:amd64 (1.22.1-3) ... Setting up libidn2-dev:amd64 (2.3.8-5) ... Setting up libngtcp2-crypto-ossl0:amd64 (1.24.0-1) ... Setting up libdpkg-perl (1.23.11) ... Setting up libreadline8t64:amd64 (8.3-4) ... Setting up libnss3-dev:amd64 (2:3.130-1) ... Setting up libc6-dev:amd64 (2.43-7) ... Setting up libharfbuzz0b:amd64 (12.3.2-2+b2) ... Setting up cpp-16-x86-64-linux-gnu (16.2.0-3) ... Setting up libxss1:amd64 (1:1.2.3-1+b4) ... Setting up libfontconfig1:amd64 (2.17.1-5) ... Setting up libxmlsec1-openssl10310:amd64 (1.3.10-2) ... Setting up libsm6:amd64 (2:1.2.6-1+b2) ... Setting up libp11-kit-dev:amd64 (0.26.5-1) ... Setting up binutils-x86-64-linux-gnu (2.47-6) ... Setting up libbz2-dev:amd64 (1.0.8-6+b2) ... Setting up cpp-x86-64-linux-gnu (4:16.1.0-3) ... Setting up libgnutls30t64:amd64 (3.8.13-1) ... Setting up fontconfig (2.17.1-5) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.6-1+b5) ... Setting up libncurses-dev:amd64 (6.6+20260608-2) ... Setting up libtirpc3t64:amd64 (1.3.7+ds-1) ... Setting up libpython3.14-stdlib:amd64 (3.14.8-1) ... Setting up libxmlsec1-nss10310:amd64 (1.3.10-2) ... Setting up libtk8.6:amd64 (8.6.18-1) ... Setting up libpango-1.0-0:amd64 (1.58.2-1) ... Setting up libpsl5t64:amd64 (0.23.3-1) ... Setting up gcc-16-x86-64-linux-gnu (16.2.0-3) ... Setting up binutils (2.47-6) ... Setting up libreadline-dev:amd64 (8.3-4) ... Setting up libcairo2:amd64 (1.18.4-3+b1) ... Setting up dpkg-dev (1.23.11) ... Setting up liberror-perl (0.17030-1) ... Setting up libgnutls-dane0t64:amd64 (3.8.13-1) ... Setting up libsqlite3-dev:amd64 (3.53.4-2) ... Setting up libstdc++-16-dev:amd64 (16.2.0-3) ... Setting up libxmlsec1-gnutls10310:amd64 (1.3.10-2) ... Setting up libxt6t64:amd64 (1:1.2.1-1.3+b2) ... Setting up g++-16-x86-64-linux-gnu (16.2.0-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up libboost1.90-dev:amd64 (1.90.0-6.1+b1) ... Setting up cpp-16 (16.2.0-3) ... Setting up libboost-dev:amd64 (1.90.0.2+nmu1) ... Setting up python3.14 (3.14.8-1) ... Setting up libpangoft2-1.0-0:amd64 (1.58.2-1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.24.0-1) ... Setting up libpangocairo-1.0-0:amd64 (1.58.2-1) ... Setting up libpython3-stdlib:amd64 (3.14.7-3) ... Setting up libgnutls28-dev:amd64 (3.8.13-1) ... Setting up libcurl4-gnutls:amd64 (8.23.0~rc2-1) ... Setting up wget (1.25.0-3) ... Setting up gcc-x86-64-linux-gnu (4:16.1.0-3) ... Setting up libcurl4t64:amd64 (8.23.0~rc2-1) ... Setting up gcc-16 (16.2.0-3) ... Setting up python3 (3.14.7-3) ... Setting up libxml2-dev:amd64 (2.15.4+dfsg-1) ... Setting up r-base-core (4.6.1-6) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-labeling (0.4.3-2) ... Setting up r-cran-rcppprogress (0.4.2-3) ... Setting up git (1:2.55.0-1) ... Setting up r-cran-lattice (0.23-1-1) ... Setting up r-cran-farver (2.1.2-3) ... Setting up g++-16 (16.2.0-3) ... Setting up r-cran-viridislite (0.4.3-1) ... Setting up cpp (4:16.1.0-3) ... Setting up g++-x86-64-linux-gnu (4:16.1.0-3) ... Setting up cmake (4.3.4-1) ... Setting up curl (8.23.0~rc2-1) ... Setting up r-cran-r6 (2.6.1-2) ... Setting up r-cran-pkgkitten (0.2.4-1) ... Setting up r-cran-magrittr (2.0.5-1) ... Setting up r-cran-rappdirs (0.3.4-2) ... Setting up r-cran-filelock (1.0.3-2) ... Setting up r-cran-littler (0.3.23-1) ... Setting up r-cran-bh (1.90.0-1) ... Setting up r-cran-rcpp (1.1.2-1) ... Setting up r-cran-rlang (1.3.0-1) ... Setting up r-cran-matrixstats (1.5.0-3) ... Setting up libxslt1-dev:amd64 (1.1.45-0.1) ... Setting up r-cran-withr (3.0.3+dfsg-1) ... Setting up r-cran-generics (0.1.4-1) ... Setting up r-cran-abind (1.4-8-1) ... Setting up r-cran-glue (1.8.1-2) ... Setting up r-cran-cli (3.6.6-1) ... Setting up r-cran-lifecycle (1.0.5+dfsg-1) ... Setting up r-cran-rprojroot (2.1.1-3) ... Setting up r-cran-fnn (1.1.4.1-2) ... Setting up gcc (4:16.1.0-3) ... Setting up r-cran-png (0.1-9-1) ... Setting up r-cran-jsonlite (2.0.0+dfsg-2) ... Setting up r-cran-corrplot (0.95-2) ... Setting up r-cran-pkgconfig (2.0.3-3) ... Setting up r-cran-utf8 (1.2.6-2) ... Setting up r-cran-stringi (1.8.9-1) ... Setting up r-cran-s7 (0.2.2-1) ... Setting up r-cran-cpp11 (0.5.5-1) ... Setting up r-cran-sitmo (2.0.2-2) ... Setting up r-cran-plyr (1.8.9-2) ... Setting up r-cran-rcolorbrewer (1.1-3-2) ... Setting up r-cran-isoband (0.3.0-1) ... Setting up r-cran-scales (1.4.0-1) ... Setting up r-cran-gtable (0.3.6+dfsg-2) ... Setting up r-cran-matrix (1.7-6-1) ... Setting up r-cran-here (1.0.2-1) ... Setting up r-cran-irlba (2.3.7-1) ... Setting up r-cran-rcpptoml (0.2.3+dfsg-3) ... Setting up g++ (4:16.1.0-3) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up libxmlsec1-dev (1.3.10-2) ... Setting up build-essential (12.12) ... Setting up r-cran-rtsne (0.17-2) ... Setting up r-cran-dqrng (0.3.2+dfsg-2) ... Setting up r-cran-vctrs (0.7.3-2) ... Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... Setting up r-cran-pillar (1.11.1+dfsg-1) ... Setting up r-cran-pheatmap (1.0.13-1) ... Setting up r-cran-ellipsis (0.3.3-1) ... Setting up r-cran-rcppannoy (0.0.23-1) ... Setting up r-bioc-biocgenerics (0.58.1-1) ... Setting up r-cran-stringr (1.6.0-1) ... Setting up r-bioc-matrixgenerics (1.24.0-1) ... Setting up r-cran-ggplot2 (4.0.3+dfsg-1) ... Setting up r-cran-tibble (3.3.1+dfsg-2) ... Setting up r-cran-forcats (1.0.1-1) ... Setting up r-cran-tidyselect (1.2.1+dfsg-3) ... Setting up r-cran-reshape2 (1.4.5-1) ... Setting up pyenv (2.7.1-1) ... Setting up r-bioc-s4vectors (0.50.3+dfsg-1) ... Setting up r-cran-purrr (1.2.2-1) ... Setting up r-cran-ggrepel (0.9.8-1) ... Setting up r-cran-dplyr (1.2.1-2) ... Setting up r-cran-rspectra (0.16-2-2) ... Setting up r-bioc-iranges (2.46.0-1) ... Setting up r-cran-reticulate (1.47.0+dfsg-1) ... Setting up r-bioc-dir.expiry (1.20.0+dfsg-1) ... Setting up r-cran-uwot (0.2.5-1) ... Setting up r-bioc-biocmake (1.4.0+dfsg-1) ... Setting up r-cran-cowplot (1.2.0+dfsg-1) ... Setting up r-bioc-s4arrays (1.12.1+dfsg-1) ... Setting up r-bioc-rhdf5lib (2.0.0+dfsg2-1) ... Setting up r-bioc-rhdf5filters (1.24.1+dfsg-1) ... Setting up r-cran-tidyr (1.3.2-3) ... Setting up r-bioc-xvector (0.52.0-1) ... Setting up r-bioc-sparsearray (1.12.3+dfsg-1) ... Setting up r-bioc-rhdf5 (2.56.1+dfsg-1) ... Setting up r-bioc-delayedarray (0.38.2+dfsg-1) ... Setting up r-bioc-h5mread (1.4.1+dfsg-1) ... Setting up r-bioc-hdf5array (1.40.0-1) ... Setting up piuparts-depends-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.43-7) ... Processing triggers for ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 1m30.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-y', '--allow-downgrades', 'install', './tmp/piuparts-depends-dummy.deb'] 1m30.2s INFO: Installation of ['./tmp/piuparts-depends-dummy.deb'] ok 1m30.2s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmpr_fiz9mc/./tmp/piuparts-depends-dummy.deb 1m30.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 1m30.3s DUMP: piuparts-depends-dummy install ok installed 1m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 1m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--purge', 'piuparts-depends-dummy'] 1m30.3s DUMP: (Reading database ... 51554 files and directories currently installed.) Removing piuparts-depends-dummy (0.invalid.0) ... 1m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--purge', 'piuparts-depends-dummy'] 1m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'clean'] 1m30.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'clean'] 1m30.4s DEBUG: Recording chroot state 1m31.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 1m34.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 1m37.8s ERROR: WARN: Broken symlinks: /usr/share/pyenv/plugins/python-build/README.md.gz -> ../../../doc/pyenv/pluglins/python-build/README.md.gz /usr/share/pyenv/plugins/python-build/scripts/README.md -> ../../../../doc/pyenv/pluglins/python-build/scripts/README.md 1m37.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy'] 1m38.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m38.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy'] 1m38.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy', 'r-bioc-mofa2'] 1m38.9s DUMP: r-bioc-mofa2: Installed: (none) Candidate: 1.22.1+dfsg-1 Version table: 1.22.1+dfsg-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 1m38.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy', 'r-bioc-mofa2'] 1m38.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-y', 'install', 'r-bioc-mofa2=1.22.1+dfsg-1'] 1m40.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following NEW packages will be installed: r-bioc-mofa2 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 2475 kB of archives. After this operation, 3180 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 r-bioc-mofa2 all 1.22.1+dfsg-1 [2475 kB] Fetched 2475 kB in 0s (5429 kB/s) Selecting previously unselected package r-bioc-mofa2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51554 files and directories currently installed.) Preparing to unpack .../r-bioc-mofa2_1.22.1+dfsg-1_all.deb ... Unpacking r-bioc-mofa2 (1.22.1+dfsg-1) ... Setting up r-bioc-mofa2 (1.22.1+dfsg-1) ... 1m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-y', 'install', 'r-bioc-mofa2=1.22.1+dfsg-1'] 1m40.5s INFO: Running scripts post_install 1m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_install_exceptions'] 1m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_install_exceptions'] 1m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'systemd-tmpfiles', '--cat-config'] 1m40.5s DUMP: chroot: failed to run command 'systemd-tmpfiles': No such file or directory 1m40.5s DEBUG: Command failed (status=127), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'systemd-tmpfiles', '--cat-config'] 1m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'remove', 'r-bioc-mofa2'] 1m41.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages were automatically installed and are no longer required: cmake curl fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libarchive13t64 libblas3 libblosc1 libboost-dev libboost1.90-dev libbz2-dev libcairo2 libcurl4t64 libdatrie1 libdeflate0 libevent-2.1-7t64 libffi-dev libfontconfig1 libfreetype6 libfribidi0 libgcrypt20 libgfortran5 libglib2.0-0t64 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls28-dev libgpg-error0 libgraphite2-3 libharfbuzz0b libice6 libicu78 libidn2-dev libjbig0 libjpeg62-turbo libjsoncpp26 liblapack3 liblerc4 liblzma-dev libncurses-dev libncurses6 libngtcp2-crypto-ossl0 libnspr4 libnspr4-dev libnss3 libnss3-dev libp11-kit-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libpng16-16t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libreadline-dev libreadline8t64 librhash1 libsharpyuv0 libsm6 libsnappy1v5 libsqlite3-0 libsqlite3-dev libssl-dev libtasn1-6-dev libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libunbound8 libuv1t64 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2-16 libxml2-dev libxmlsec1-10310 libxmlsec1-dev libxmlsec1-gnutls10310 libxmlsec1-nss10310 libxmlsec1-openssl10310 libxrender1 libxslt1-dev libxslt1.1 libxss1 libxt6t64 media-types nettle-dev pyenv pyenv-runtime python3 python3-minimal python3.14 python3.14-minimal r-base-core r-bioc-biocgenerics r-bioc-biocmake r-bioc-delayedarray r-bioc-dir.expiry r-bioc-h5mread r-bioc-hdf5array r-bioc-iranges r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray r-bioc-xvector r-cran-abind r-cran-bh r-cran-cli r-cran-corrplot r-cran-cowplot r-cran-cpp11 r-cran-dplyr r-cran-dqrng r-cran-ellipsis r-cran-farver r-cran-filelock r-cran-fnn r-cran-forcats r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-glue r-cran-gtable r-cran-here r-cran-irlba r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-pheatmap r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-png r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcppeigen r-cran-rcppprogress r-cran-rcpptoml r-cran-reshape2 r-cran-reticulate r-cran-rlang r-cran-rprojroot r-cran-rspectra r-cran-rtsne r-cran-s7 r-cran-scales r-cran-sitmo r-cran-stringi r-cran-stringr r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-viridislite r-cran-withr r-pkg-team-core-architecture readline-common unzip wget x11-common xdg-utils zip zlib1g-dev Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: r-bioc-mofa2 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. After this operation, 3180 kB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51601 files and directories currently installed.) Removing r-bioc-mofa2 (1.22.1+dfsg-1) ... 1m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'remove', 'r-bioc-mofa2'] 1m41.5s INFO: Reinstalling after remove 1m41.5s INFO: Running scripts pre_install 1m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_database-server'] 1m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_database-server'] 1m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_exceptions'] 1m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_exceptions'] 1m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_extras'] 1m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_extras'] 1m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture'] 1m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture'] 1m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy'] 1m41.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy'] 1m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy', 'r-bioc-mofa2'] 1m41.6s DUMP: r-bioc-mofa2: Installed: (none) Candidate: 1.22.1+dfsg-1 Version table: 1.22.1+dfsg-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 1m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy', 'r-bioc-mofa2'] 1m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-y', 'install', 'r-bioc-mofa2=1.22.1+dfsg-1'] 1m42.6s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following NEW packages will be installed: r-bioc-mofa2 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/2475 kB of archives. After this operation, 3180 kB of additional disk space will be used. Selecting previously unselected package r-bioc-mofa2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51554 files and directories currently installed.) Preparing to unpack .../r-bioc-mofa2_1.22.1+dfsg-1_all.deb ... Unpacking r-bioc-mofa2 (1.22.1+dfsg-1) ... Setting up r-bioc-mofa2 (1.22.1+dfsg-1) ... 1m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-y', 'install', 'r-bioc-mofa2=1.22.1+dfsg-1'] 1m42.6s INFO: Running scripts post_install 1m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_install_exceptions'] 1m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_install_exceptions'] 1m42.6s INFO: Running scripts pre_install 1m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_database-server'] 1m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_database-server'] 1m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_exceptions'] 1m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_exceptions'] 1m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_extras'] 1m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_extras'] 1m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture'] 1m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture'] 1m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy'] 1m42.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m42.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy'] 1m42.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy', 'r-bioc-mofa2'] 1m42.7s DUMP: r-bioc-mofa2: Installed: 1.22.1+dfsg-1 Candidate: 1.22.1+dfsg-1 Version table: *** 1.22.1+dfsg-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 1m42.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-cache', 'policy', 'r-bioc-mofa2'] 1m42.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-y', 'install', '--reinstall', 'r-bioc-mofa2=1.22.1+dfsg-1'] 1m43.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... 0 upgraded, 0 newly installed, 1 reinstalled, 0 to remove and 0 not upgraded. Need to get 0 B/2475 kB of archives. After this operation, 0 B of additional disk space will be used. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51601 files and directories currently installed.) Preparing to unpack .../r-bioc-mofa2_1.22.1+dfsg-1_all.deb ... Unpacking r-bioc-mofa2 (1.22.1+dfsg-1) over (1.22.1+dfsg-1) ... Setting up r-bioc-mofa2 (1.22.1+dfsg-1) ... 1m43.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', '-y', 'install', '--reinstall', 'r-bioc-mofa2=1.22.1+dfsg-1'] 1m43.8s INFO: Running scripts post_install 1m43.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_install_exceptions'] 1m43.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_install_exceptions'] 1m43.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 1m46.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 1m50.1s ERROR: WARN: Broken symlinks: /usr/share/pyenv/plugins/python-build/README.md.gz -> ../../../doc/pyenv/pluglins/python-build/README.md.gz (pyenv) /usr/share/pyenv/plugins/python-build/scripts/README.md -> ../../../../doc/pyenv/pluglins/python-build/scripts/README.md (pyenv) 1m52.6s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', '-ac', '--ignore-obsolete'] 1m59.0s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', '-ac', '--ignore-obsolete'] 1m59.0s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m59.0s DUMP: 0.17.5+b5 1m59.0s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m59.0s INFO: Running adequate version 0.17.5+b5 now. 1m59.0s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'r-bioc-mofa2'] 1m59.0s DUMP: r-bioc-mofa2: py-file-not-bytecompiled /usr/lib/R/site-library/MOFA2/scripts/template_script.py r-bioc-mofa2: py-file-not-bytecompiled /usr/lib/R/site-library/MOFA2/scripts/template_script_dataframe.py r-bioc-mofa2: py-file-not-bytecompiled /usr/lib/R/site-library/MOFA2/scripts/template_script_matrix.py 1m59.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'r-bioc-mofa2'] 1m59.0s ERROR: WARN: Inadequate results from running adequate! r-bioc-mofa2: py-file-not-bytecompiled /usr/lib/R/site-library/MOFA2/scripts/template_script.py r-bioc-mofa2: py-file-not-bytecompiled /usr/lib/R/site-library/MOFA2/scripts/template_script_dataframe.py r-bioc-mofa2: py-file-not-bytecompiled /usr/lib/R/site-library/MOFA2/scripts/template_script_matrix.py 1m59.0s ERROR: WARN: Running adequate resulted in inadequate tags found: py-file-not-bytecompiled 1m59.0s INFO: Running scripts pre_remove 1m59.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m59.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m59.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m59.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m59.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 2m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 2m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 2m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 2m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_exceptions'] 2m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_exceptions'] 2m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_preseed_cleanup'] 2m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/pre_remove_preseed_cleanup'] 2m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 2m7.8s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed binutils binutils 2.47-6 install ok installed binutils-common:amd64 binutils-common 2.47-6 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.47-6 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed build-essential build-essential 12.12 install ok installed bzip2 bzip2 1.0.8-6+b2 install ok installed ca-certificates ca-certificates 20260816 install ok installed cmake cmake 4.3.4-1 install ok installed coreutils coreutils 9.10-1 install ok installed cpp cpp 4:16.1.0-3 install ok installed cpp-16 cpp-16 16.2.0-3 install ok installed cpp-16-x86-64-linux-gnu cpp-16-x86-64-linux-gnu 16.2.0-3 install ok installed cpp-x86-64-linux-gnu cpp-x86-64-linux-gnu 4:16.1.0-3 install ok installed curl curl 8.23.0~rc2-1 install ok installed dash dash 0.5.12-12 install ok installed dbconfig-common dbconfig-common 2.1.0 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.11 install ok installed dpkg-dev dpkg-dev 1.23.11 install ok installed findutils findutils 4.11.0-3 install ok installed fontconfig fontconfig 2.17.1-5 install ok installed fontconfig-config fontconfig-config 2.17.1-5 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-9 install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-9 install ok installed g++ g++ 4:16.1.0-3 install ok installed g++-16 g++-16 16.2.0-3 install ok installed g++-16-x86-64-linux-gnu g++-16-x86-64-linux-gnu 16.2.0-3 install ok installed g++-x86-64-linux-gnu g++-x86-64-linux-gnu 4:16.1.0-3 install ok installed gcc gcc 4:16.1.0-3 install ok installed gcc-16 gcc-16 16.2.0-3 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-3 install ok installed gcc-16-x86-64-linux-gnu gcc-16-x86-64-linux-gnu 16.2.0-3 install ok installed gcc-x86-64-linux-gnu gcc-x86-64-linux-gnu 4:16.1.0-3 install ok installed git git 1:2.55.0-1 install ok installed git-man git-man 1:2.55.0-1 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libarchive13t64:amd64 libarchive13t64 3.8.9-1 install ok installed libasan8:amd64 libasan8 16.2.0-3 install ok installed libatomic1:amd64 libatomic1 16.2.0-3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.2.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.2.1-1 install ok installed libbinutils:amd64 libbinutils 2.47-6 install ok installed libblas3:amd64 libblas3 3.12.1-8 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libblosc1:amd64 libblosc1 1.21.5+ds-2+b2 install ok installed libboost-dev:amd64 libboost-dev 1.90.0.2+nmu1 install ok installed libboost1.90-dev:amd64 libboost1.90-dev 1.90.0-6.1+b1 install ok installed libbrotli1:amd64 libbrotli1 1.2.0-4+b1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libbz2-dev:amd64 libbz2-dev 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-7 install ok installed libc-dev-bin libc-dev-bin 2.43-7 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-7 install ok installed libc6:amd64 libc6 2.43-7 install ok installed libc6-dev:amd64 libc6-dev 2.43-7 install ok installed libcairo2:amd64 libcairo2 1.18.4-3+b1 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1 install ok installed libcc1-0:amd64 libcc1-0 16.2.0-3 install ok installed libcom-err2:amd64 libcom-err2 1.47.4-1+b2 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.47-6 install ok installed libctf0:amd64 libctf0 2.47-6 install ok installed libcurl4-gnutls:amd64 libcurl4-gnutls 8.23.0~rc2-1 install ok installed libcurl4t64:amd64 libcurl4t64 8.23.0~rc2-1 install ok installed libdatrie1:amd64 libdatrie1 0.2.14-2 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libdeflate0:amd64 libdeflate0 1.25-1 install ok installed libdpkg-perl libdpkg-perl 1.23.11 install ok installed liberror-perl liberror-perl 0.17030-1 install ok installed libevent-2.1-7t64:amd64 libevent-2.1-7t64 2.1.13-stable-1 install ok installed libexpat1:amd64 libexpat1 2.8.5-2 install ok installed libffi-dev:amd64 libffi-dev 3.8.0-2 install ok installed libffi8:amd64 libffi8 3.8.0-2 install ok installed libfontconfig1:amd64 libfontconfig1 2.17.1-5 install ok installed libfreetype6:amd64 libfreetype6 2.14.3+dfsg-2 install ok installed libfribidi0:amd64 libfribidi0 1.0.16-5+b1 install ok installed libgcc-16-dev:amd64 libgcc-16-dev 16.2.0-3 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.12.4-2 install ok installed libgdbm-compat4t64:amd64 libgdbm-compat4t64 1.26-1+b2 install ok installed libgdbm6t64:amd64 libgdbm6t64 1.26-1+b2 install ok installed libgfortran5:amd64 libgfortran5 16.2.0-3 install ok installed libglib2.0-0t64:amd64 libglib2.0-0t64 2.90.0-1 install ok installed libgmp-dev:amd64 libgmp-dev 2:6.3.0+dfsg-5+b2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libgmpxx4ldbl:amd64 libgmpxx4ldbl 2:6.3.0+dfsg-5+b2 install ok installed libgnutls-dane0t64:amd64 libgnutls-dane0t64 3.8.13-1 install ok installed libgnutls28-dev:amd64 libgnutls28-dev 3.8.13-1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.13-1 install ok installed libgomp1:amd64 libgomp1 16.2.0-3 install ok installed libgpg-error0:amd64 libgpg-error0 1.61-5 install ok installed libgprofng0:amd64 libgprofng0 2.47-6 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.15-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.22.1-3 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 12.3.2-2+b2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed libhwasan0:amd64 libhwasan0 16.2.0-3 install ok installed libice6:amd64 libice6 2:1.1.1-1+b2 install ok installed libicu78:amd64 libicu78 78.3-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.8-5 install ok installed libidn2-dev:amd64 libidn2-dev 2.3.8-5 install ok installed libisl23:amd64 libisl23 0.28-1 install ok installed libitm1:amd64 libitm1 16.2.0-3 install ok installed libjansson4:amd64 libjansson4 2.15.1-1 install ok installed libjbig0:amd64 libjbig0 2.1-6.1+b3 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:3.1.3-4 install ok installed libjsoncpp26:amd64 libjsoncpp26 1.9.8-2 install ok installed libk5crypto3:amd64 libk5crypto3 1.22.1-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-6+b2 install ok installed libkrb5-3:amd64 libkrb5-3 1.22.1-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.22.1-3 install ok installed liblapack3:amd64 liblapack3 3.12.1-8 install ok installed libldap2:amd64 libldap2 2.6.14+dfsg-2 install ok installed liblerc4:amd64 liblerc4 4.2.0+ds-1 install ok installed liblsan0:amd64 liblsan0 16.2.0-3 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma-dev:amd64 liblzma-dev 5.8.4-1 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libmpc3:amd64 libmpc3 1.3.1-3 install ok installed libmpfr6:amd64 libmpfr6 4.2.2-3 install ok installed libncurses-dev:amd64 libncurses-dev 6.6+20260608-2 install ok installed libncurses6:amd64 libncurses6 6.6+20260608-2 install ok installed libncursesw6:amd64 libncursesw6 6.6+20260608-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.70.0-1 install ok installed libnghttp3-9:amd64 libnghttp3-9 1.17.0-1 install ok installed libngtcp2-16:amd64 libngtcp2-16 1.24.0-1 install ok installed libngtcp2-crypto-gnutls8:amd64 libngtcp2-crypto-gnutls8 1.24.0-1 install ok installed libngtcp2-crypto-ossl0:amd64 libngtcp2-crypto-ossl0 1.24.0-1 install ok installed libnspr4:amd64 libnspr4 2:4.40-1 install ok installed libnspr4-dev libnspr4-dev 2:4.40-1 install ok installed libnss3:amd64 libnss3 2:3.130-1 install ok installed libnss3-dev:amd64 libnss3-dev 2:3.130-1 install ok installed libp11-kit-dev:amd64 libp11-kit-dev 0.26.5-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.26.5-1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.58.2-1 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.58.2-1 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.58.2-1 install ok installed libpaper-utils libpaper-utils 2.2.5-0.4 install ok installed libpaper2:amd64 libpaper2 2.2.5-0.4 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-3.1 install ok installed libperl5.42:amd64 libperl5.42 5.42.3-1 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.46.4-1+b2 install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.59-1 install ok installed libproc2-1:amd64 libproc2-1 2:4.0.7-1 install ok installed libpsl5t64:amd64 libpsl5t64 0.23.3-1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.14.7-3 install ok installed libpython3.14-minimal:amd64 libpython3.14-minimal 3.14.8-1 install ok installed libpython3.14-stdlib:amd64 libpython3.14-stdlib 3.14.8-1 install ok installed libquadmath0:amd64 libquadmath0 16.2.0-3 install ok installed libreadline-dev:amd64 libreadline-dev 8.3-4 install ok installed libreadline8t64:amd64 libreadline8t64 8.3-4 install ok installed librhash1:amd64 librhash1 1.4.6-1.1+b1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-11 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-11 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b1 install ok installed libselinux1:amd64 libselinux1 3.11-2.1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b1 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsframe3:amd64 libsframe3 2.47-6 install ok installed libsharpyuv0:amd64 libsharpyuv0 1.6.0-0.1 install ok installed libsm6:amd64 libsm6 2:1.2.6-1+b2 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libsnappy1v5:amd64 libsnappy1v5 1.3.1-3 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.53.4-2 install ok installed libsqlite3-dev:amd64 libsqlite3-dev 3.53.4-2 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.1-6 install ok installed libssl-dev:amd64 libssl-dev 3.6.5-1 install ok installed libssl3t64:amd64 libssl3t64 3.6.5-1 install ok installed libstdc++-16-dev:amd64 libstdc++-16-dev 16.2.0-3 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 262-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.21.0-2+b1 install ok installed libtasn1-6-dev:amd64 libtasn1-6-dev 4.21.0-2+b1 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.18+dfsg-1 install ok installed libtext-charwidth-perl:amd64 libtext-charwidth-perl 0.04-12+b1 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-11 install ok installed libthai-data libthai-data 0.1.30-3 install ok installed libthai0:amd64 libthai0 0.1.30-3 install ok installed libtiff6:amd64 libtiff6 4.7.2-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libtirpc-common libtirpc-common 1.3.7+ds-1 install ok installed libtirpc3t64:amd64 libtirpc3t64 1.3.7+ds-1 install ok installed libtk8.6:amd64 libtk8.6 8.6.18-1 install ok installed libtsan2:amd64 libtsan2 16.2.0-3 install ok installed libubsan1:amd64 libubsan1 16.2.0-3 install ok installed libudev1:amd64 libudev1 262-1 install ok installed libunbound8:amd64 libunbound8 1.26.1-1 install ok installed libunistring5:amd64 libunistring5 1.4.2-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libuv1t64:amd64 libuv1t64 1.52.1-4 install ok installed libwebp7:amd64 libwebp7 1.6.0-0.1 install ok installed libx11-6:amd64 libx11-6 2:1.8.13-1 install ok installed libx11-data libx11-data 2:1.8.13-1 install ok installed libxau6:amd64 libxau6 1:1.0.11-1+b2 install ok installed libxcb-render0:amd64 libxcb-render0 1.17.0-2+b2 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.17.0-2+b2 install ok installed libxcb1:amd64 libxcb1 1.17.0-2+b2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.5-2+b1 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b4 install ok installed libxft2:amd64 libxft2 2.3.6-1+b5 install ok installed libxml2-16:amd64 libxml2-16 2.15.4+dfsg-1 install ok installed libxml2-dev:amd64 libxml2-dev 2.15.4+dfsg-1 install ok installed libxmlsec1-10310:amd64 libxmlsec1-10310 1.3.10-2 install ok installed libxmlsec1-dev libxmlsec1-dev 1.3.10-2 install ok installed libxmlsec1-gnutls10310:amd64 libxmlsec1-gnutls10310 1.3.10-2 install ok installed libxmlsec1-nss10310:amd64 libxmlsec1-nss10310 1.3.10-2 install ok installed libxmlsec1-openssl10310:amd64 libxmlsec1-openssl10310 1.3.10-2 install ok installed libxrender1:amd64 libxrender1 1:0.9.12-1+b2 install ok installed libxslt1-dev:amd64 libxslt1-dev 1.1.45-0.1 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.45-0.1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1+b4 install ok installed libxt6t64:amd64 libxt6t64 1:1.2.1-1.3+b2 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed linux-libc-dev linux-libc-dev 7.2.9-1 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.2-2 install ok installed make make 4.4.1-3 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed media-types media-types 14.0.0 install ok installed mount mount 2.42.4-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed netbase netbase 6.6 install ok installed nettle-dev:amd64 nettle-dev 3.10.2-1+b1 install ok installed openssl openssl 3.6.5-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.5-1 install ok installed passwd passwd 1:4.20.2-2 install ok installed patch patch 2.8-2 install ok installed perl perl 5.42.3-1 install ok installed perl-base perl-base 5.42.3-1 install ok installed perl-modules-5.42 perl-modules-5.42 5.42.3-1 install ok installed procps procps 2:4.0.7-1 install ok installed pyenv pyenv 2.7.1-1 install ok installed pyenv-runtime pyenv-runtime 2.7.1-1 install ok installed python3 python3 3.14.7-3 install ok installed python3-minimal python3-minimal 3.14.7-3 install ok installed python3.14 python3.14 3.14.8-1 install ok installed python3.14-minimal python3.14-minimal 3.14.8-1 install ok installed r-base-core r-base-core 4.6.1-6 install ok installed r-bioc-biocgenerics r-bioc-biocgenerics 0.58.1-1 install ok installed r-bioc-biocmake r-bioc-biocmake 1.4.0+dfsg-1 install ok installed r-bioc-delayedarray r-bioc-delayedarray 0.38.2+dfsg-1 install ok installed r-bioc-dir.expiry r-bioc-dir.expiry 1.20.0+dfsg-1 install ok installed r-bioc-h5mread r-bioc-h5mread 1.4.1+dfsg-1 install ok installed r-bioc-hdf5array r-bioc-hdf5array 1.40.0-1 install ok installed r-bioc-iranges r-bioc-iranges 2.46.0-1 install ok installed r-bioc-matrixgenerics r-bioc-matrixgenerics 1.24.0-1 install ok installed r-bioc-mofa2 r-bioc-mofa2 1.22.1+dfsg-1 install ok installed r-bioc-rhdf5 r-bioc-rhdf5 2.56.1+dfsg-1 install ok installed r-bioc-rhdf5filters r-bioc-rhdf5filters 1.24.1+dfsg-1 install ok installed r-bioc-rhdf5lib r-bioc-rhdf5lib 2.0.0+dfsg2-1 install ok installed r-bioc-s4arrays r-bioc-s4arrays 1.12.1+dfsg-1 install ok installed r-bioc-s4vectors r-bioc-s4vectors 0.50.3+dfsg-1 install ok installed r-bioc-sparsearray r-bioc-sparsearray 1.12.3+dfsg-1 install ok installed r-bioc-xvector r-bioc-xvector 0.52.0-1 install ok installed r-cran-abind r-cran-abind 1.4-8-1 install ok installed r-cran-bh r-cran-bh 1.90.0-1 install ok installed r-cran-cli r-cran-cli 3.6.6-1 install ok installed r-cran-corrplot r-cran-corrplot 0.95-2 install ok installed r-cran-cowplot r-cran-cowplot 1.2.0+dfsg-1 install ok installed r-cran-cpp11 r-cran-cpp11 0.5.5-1 install ok installed r-cran-dplyr r-cran-dplyr 1.2.1-2 install ok installed r-cran-dqrng r-cran-dqrng 0.3.2+dfsg-2 install ok installed r-cran-ellipsis r-cran-ellipsis 0.3.3-1 install ok installed r-cran-farver r-cran-farver 2.1.2-3 install ok installed r-cran-filelock r-cran-filelock 1.0.3-2 install ok installed r-cran-fnn r-cran-fnn 1.1.4.1-2 install ok installed r-cran-forcats r-cran-forcats 1.0.1-1 install ok installed r-cran-generics r-cran-generics 0.1.4-1 install ok installed r-cran-ggplot2 r-cran-ggplot2 4.0.3+dfsg-1 install ok installed r-cran-ggrepel r-cran-ggrepel 0.9.8-1 install ok installed r-cran-glue r-cran-glue 1.8.1-2 install ok installed r-cran-gtable r-cran-gtable 0.3.6+dfsg-2 install ok installed r-cran-here r-cran-here 1.0.2-1 install ok installed r-cran-irlba r-cran-irlba 2.3.7-1 install ok installed r-cran-isoband r-cran-isoband 0.3.0-1 install ok installed r-cran-jsonlite r-cran-jsonlite 2.0.0+dfsg-2 install ok installed r-cran-labeling r-cran-labeling 0.4.3-2 install ok installed r-cran-lattice r-cran-lattice 0.23-1-1 install ok installed r-cran-lifecycle r-cran-lifecycle 1.0.5+dfsg-1 install ok installed r-cran-littler r-cran-littler 0.3.23-1 install ok installed r-cran-magrittr r-cran-magrittr 2.0.5-1 install ok installed r-cran-matrix r-cran-matrix 1.7-6-1 install ok installed r-cran-matrixstats r-cran-matrixstats 1.5.0-3 install ok installed r-cran-pheatmap r-cran-pheatmap 1.0.13-1 install ok installed r-cran-pillar r-cran-pillar 1.11.1+dfsg-1 install ok installed r-cran-pkgconfig r-cran-pkgconfig 2.0.3-3 install ok installed r-cran-pkgkitten r-cran-pkgkitten 0.2.4-1 install ok installed r-cran-plyr r-cran-plyr 1.8.9-2 install ok installed r-cran-png r-cran-png 0.1-9-1 install ok installed r-cran-purrr r-cran-purrr 1.2.2-1 install ok installed r-cran-r6 r-cran-r6 2.6.1-2 install ok installed r-cran-rappdirs r-cran-rappdirs 0.3.4-2 install ok installed r-cran-rcolorbrewer r-cran-rcolorbrewer 1.1-3-2 install ok installed r-cran-rcpp r-cran-rcpp 1.1.2-1 install ok installed r-cran-rcppannoy r-cran-rcppannoy 0.0.23-1 install ok installed r-cran-rcppeigen r-cran-rcppeigen 0.3.4.0.2-1 install ok installed r-cran-rcppprogress r-cran-rcppprogress 0.4.2-3 install ok installed r-cran-rcpptoml r-cran-rcpptoml 0.2.3+dfsg-3 install ok installed r-cran-reshape2 r-cran-reshape2 1.4.5-1 install ok installed r-cran-reticulate r-cran-reticulate 1.47.0+dfsg-1 install ok installed r-cran-rlang r-cran-rlang 1.3.0-1 install ok installed r-cran-rprojroot r-cran-rprojroot 2.1.1-3 install ok installed r-cran-rspectra r-cran-rspectra 0.16-2-2 install ok installed r-cran-rtsne r-cran-rtsne 0.17-2 install ok installed r-cran-s7 r-cran-s7 0.2.2-1 install ok installed r-cran-scales r-cran-scales 1.4.0-1 install ok installed r-cran-sitmo r-cran-sitmo 2.0.2-2 install ok installed r-cran-stringi r-cran-stringi 1.8.9-1 install ok installed r-cran-stringr r-cran-stringr 1.6.0-1 install ok installed r-cran-tibble r-cran-tibble 3.3.1+dfsg-2 install ok installed r-cran-tidyr r-cran-tidyr 1.3.2-3 install ok installed r-cran-tidyselect r-cran-tidyselect 1.2.1+dfsg-3 install ok installed r-cran-utf8 r-cran-utf8 1.2.6-2 install ok installed r-cran-uwot r-cran-uwot 0.2.5-1 install ok installed r-cran-vctrs r-cran-vctrs 0.7.3-2 install ok installed r-cran-viridislite r-cran-viridislite 0.4.3-1 install ok installed r-cran-withr r-cran-withr 3.0.3+dfsg-1 install ok installed r-pkg-team-core-architecture r-pkg-team-core-architecture 20260707 install ok installed readline-common readline-common 8.3-4 install ok installed sed sed 4.9-3 install ok installed sensible-utils sensible-utils 0.0.26 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-6 install ok installed tzdata tzdata 2026e-1 install ok installed ucf ucf 3.0056 install ok installed unzip unzip 6.0-31 install ok installed util-linux util-linux 2.42.4-1 install ok installed wget wget 1.25.0-3 install ok installed x11-common x11-common 1:7.7+26 install ok installed xdg-utils xdg-utils 1.2.1-2 install ok installed xz-utils xz-utils 5.8.4-1 install ok installed zip zip 3.0-16 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.3.dfsg+really1.3.2-3 2m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 2m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'remove', '--allow-remove-essential', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'build-essential', 'bzip2', 'ca-certificates', 'cmake', 'cpp', 'cpp-16', 'cpp-16-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'curl', 'dpkg-dev', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'g++-', 'g++-16', 'g++-16-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-16', 'gcc-16-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'git', 'git-man', 'libarchive13t64:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libboost-dev:amd64', 'libboost1.90-dev:amd64', 'libbrotli1:amd64', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcc1-0:amd64', 'libcom-err2:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4-gnutls:amd64', 'libcurl4t64:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libdpkg-perl', 'liberror-perl', 'libevent-2.1-7t64:amd64', 'libexpat1:amd64', 'libffi-dev:amd64', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-16-dev:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libgmp-dev:amd64', 'libgmpxx4ldbl:amd64', 'libgnutls-dane0t64:amd64', 'libgnutls28-dev:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhwasan0:amd64', 'libice6:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libidn2-dev:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjsoncpp26:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'liblerc4:amd64', 'liblsan0:amd64', 'liblzma-dev:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libnspr4:amd64', 'libnspr4-dev', 'libnss3:amd64', 'libnss3-dev:amd64', 'libp11-kit-dev:amd64', 'libp11-kit0:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper2:amd64', 'libperl5.42:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libquadmath0:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'librhash1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsframe3:amd64', 'libsharpyuv0:amd64', 'libsm6:amd64', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libsqlite3-dev:amd64', 'libssh2-1t64:amd64', 'libssl-dev:amd64', 'libstdc++-16-dev:amd64', 'libtasn1-6:amd64', 'libtasn1-6-dev:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunbound8:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2-16:amd64', 'libxml2-dev:amd64', 'libxmlsec1-10310:amd64', 'libxmlsec1-dev', 'libxmlsec1-gnutls10310:amd64', 'libxmlsec1-nss10310:amd64', 'libxmlsec1-openssl10310:amd64', 'libxrender1:amd64', 'libxslt1-dev:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'linux-libc-dev', 'make', 'media-types', 'netbase', 'nettle-dev:amd64', 'openssl', 'patch', 'perl', 'perl-modules-5.42', 'pyenv', 'pyenv-runtime', 'python3', 'python3-minimal', 'python3.14', 'python3.14-minimal', 'r-base-core', 'r-bioc-biocgenerics', 'r-bioc-biocmake', 'r-bioc-delayedarray', 'r-bioc-dir.expiry', 'r-bioc-h5mread', 'r-bioc-hdf5array', 'r-bioc-iranges', 'r-bioc-matrixgenerics', 'r-bioc-rhdf5', 'r-bioc-rhdf5filters', 'r-bioc-rhdf5lib', 'r-bioc-s4arrays', 'r-bioc-s4vectors', 'r-bioc-sparsearray', 'r-bioc-xvector', 'r-cran-abind', 'r-cran-bh', 'r-cran-cli', 'r-cran-corrplot', 'r-cran-cowplot', 'r-cran-cpp11', 'r-cran-dplyr', 'r-cran-dqrng', 'r-cran-ellipsis', 'r-cran-farver', 'r-cran-filelock', 'r-cran-fnn', 'r-cran-forcats', 'r-cran-generics', 'r-cran-ggplot2', 'r-cran-ggrepel', 'r-cran-glue', 'r-cran-gtable', 'r-cran-here', 'r-cran-irlba', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-matrix', 'r-cran-matrixstats', 'r-cran-pheatmap', 'r-cran-pillar', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-plyr', 'r-cran-png', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rappdirs', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rcppannoy', 'r-cran-rcppeigen', 'r-cran-rcppprogress', 'r-cran-rcpptoml', 'r-cran-reshape2', 'r-cran-reticulate', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rspectra', 'r-cran-rtsne', 'r-cran-s7', 'r-cran-scales', 'r-cran-sitmo', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-utf8', 'r-cran-uwot', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-withr', 'r-pkg-team-core-architecture', 'readline-common', 'unzip', 'wget', 'x11-common', 'xdg-utils', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'r-bioc-mofa2'] 2m12.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: binutils binutils-common binutils-x86-64-linux-gnu build-essential bzip2 ca-certificates cmake cpp cpp-16 cpp-16-x86-64-linux-gnu cpp-x86-64-linux-gnu curl dpkg-dev fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++ g++-16 g++-16-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-16 gcc-16-x86-64-linux-gnu gcc-x86-64-linux-gnu git git-man libarchive13t64 libasan8 libatomic1 libbinutils libblas3 libblosc1 libboost-dev libboost1.90-dev libbrotli1 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcom-err2 libctf-nobfd0 libctf0 libcurl4-gnutls libcurl4t64 libdatrie1 libdeflate0 libdpkg-perl liberror-perl libevent-2.1-7t64 libexpat1 libffi-dev libffi8 libfontconfig1 libfreetype6 libfribidi0 libgcc-16-dev libgcrypt20 libgdbm-compat4t64 libgdbm6t64 libgfortran5 libglib2.0-0t64 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 libgnutls28-dev libgnutls30t64 libgomp1 libgpg-error0 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhwasan0 libice6 libicu78 libidn2-0 libidn2-dev libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjsoncpp26 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap2 liblerc4 liblsan0 liblzma-dev libmpc3 libmpfr6 libncurses-dev libncurses6 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libngtcp2-crypto-ossl0 libnspr4 libnspr4-dev libnss3 libnss3-dev libp11-kit-dev libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libperl5.42 libpixman-1-0 libpng16-16t64 libpsl5t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libquadmath0 libreadline-dev libreadline8t64 librhash1 libsasl2-2 libsasl2-modules-db libsframe3 libsharpyuv0 libsm6 libsnappy1v5 libsqlite3-0 libsqlite3-dev libssh2-1t64 libssl-dev libstdc++-16-dev libtasn1-6 libtasn1-6-dev libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libtsan2 libubsan1 libunbound8 libunistring5 libuv1t64 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2-16 libxml2-dev libxmlsec1-10310 libxmlsec1-dev libxmlsec1-gnutls10310 libxmlsec1-nss10310 libxmlsec1-openssl10310 libxrender1 libxslt1-dev libxslt1.1 libxss1 libxt6t64 linux-libc-dev make media-types netbase nettle-dev openssl patch perl perl-modules-5.42 pyenv pyenv-runtime python3 python3-minimal python3.14 python3.14-minimal r-base-core r-bioc-biocgenerics r-bioc-biocmake r-bioc-delayedarray r-bioc-dir.expiry r-bioc-h5mread r-bioc-hdf5array r-bioc-iranges r-bioc-matrixgenerics r-bioc-mofa2 r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray r-bioc-xvector r-cran-abind r-cran-bh r-cran-cli r-cran-corrplot r-cran-cowplot r-cran-cpp11 r-cran-dplyr r-cran-dqrng r-cran-ellipsis r-cran-farver r-cran-filelock r-cran-fnn r-cran-forcats r-cran-generics r-cran-ggplot2 r-cran-ggrepel r-cran-glue r-cran-gtable r-cran-here r-cran-irlba r-cran-isoband r-cran-jsonlite r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-pheatmap r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-png r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy r-cran-rcppeigen r-cran-rcppprogress r-cran-rcpptoml r-cran-reshape2 r-cran-reticulate r-cran-rlang r-cran-rprojroot r-cran-rspectra r-cran-rtsne r-cran-s7 r-cran-scales r-cran-sitmo r-cran-stringi r-cran-stringr r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-utf8 r-cran-uwot r-cran-vctrs r-cran-viridislite r-cran-withr r-pkg-team-core-architecture readline-common unzip wget x11-common xdg-utils xz-utils zip zlib1g-dev 0 upgraded, 0 newly installed, 276 to remove and 0 not upgraded. After this operation, 1062 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51601 files and directories currently installed.) Removing r-bioc-mofa2 (1.22.1+dfsg-1) ... Removing r-bioc-hdf5array (1.40.0-1) ... Removing r-bioc-h5mread (1.4.1+dfsg-1) ... Removing r-cran-reticulate (1.47.0+dfsg-1) ... Removing pyenv (2.7.1-1) ... Removing r-cran-uwot (0.2.5-1) ... Removing r-cran-rspectra (0.16-2-2) ... Removing r-bioc-delayedarray (0.38.2+dfsg-1) ... Removing r-bioc-sparsearray (1.12.3+dfsg-1) ... Removing r-bioc-s4arrays (1.12.1+dfsg-1) ... Removing r-cran-abind (1.4-8-1) ... Removing r-cran-tidyr (1.3.2-3) ... Removing r-cran-dplyr (1.2.1-2) ... Removing r-cran-tidyselect (1.2.1+dfsg-3) ... Removing r-cran-dqrng (0.3.2+dfsg-2) ... Removing r-cran-sitmo (2.0.2-2) ... Removing curl (8.23.0~rc2-1) ... Removing git (1:2.55.0-1) ... Removing git-man (1:2.55.0-1) ... Removing r-cran-bh (1.90.0-1) ... Removing libboost-dev:amd64 (1.90.0.2+nmu1) ... Removing libboost1.90-dev:amd64 (1.90.0-6.1+b1) ... Removing r-cran-rtsne (0.17-2) ... Removing r-cran-irlba (2.3.7-1) ... Removing r-cran-rcppeigen (0.3.4.0.2-1) ... Removing libbz2-dev:amd64 (1.0.8-6+b2) ... Removing libxmlsec1-dev (1.3.10-2) ... Removing libxslt1-dev:amd64 (1.1.45-0.1) ... Removing libxml2-dev:amd64 (2.15.4+dfsg-1) ... Removing zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Removing libsqlite3-dev:amd64 (3.53.4-2) ... Removing libreadline-dev:amd64 (8.3-4) ... Removing libncurses-dev:amd64 (6.6+20260608-2) ... Removing libgnutls28-dev:amd64 (3.8.13-1) ... Removing libcurl4-gnutls:amd64 (8.23.0~rc2-1) ... Removing liberror-perl (0.17030-1) ... Removing libgnutls-dane0t64:amd64 (3.8.13-1) ... Removing libunbound8:amd64 (1.26.1-1) ... Removing libevent-2.1-7t64:amd64 (2.1.13-stable-1) ... Removing python3 (3.14.7-3) ... Removing python3.14 (3.14.8-1) ... Removing python3-minimal (3.14.7-3) ... Removing python3.14-minimal (3.14.8-1) ... Removing libffi-dev:amd64 (3.8.0-2) ... Removing libpython3-stdlib:amd64 (3.14.7-3) ... Removing libpython3.14-stdlib:amd64 (3.14.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libp11-kit-dev:amd64 (0.26.5-1) ... Removing libxmlsec1-openssl10310:amd64 (1.3.10-2) ... Removing nettle-dev:amd64 (3.10.2-1+b1) ... Removing libgmp-dev:amd64 (2:6.3.0+dfsg-5+b2) ... Removing libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5+b2) ... Removing libxmlsec1-gnutls10310:amd64 (1.3.10-2) ... Removing wget (1.25.0-3) ... Removing r-bioc-xvector (0.52.0-1) ... Removing r-bioc-iranges (2.46.0-1) ... Removing r-cran-reshape2 (1.4.5-1) ... Removing r-cran-stringr (1.6.0-1) ... Removing r-cran-stringi (1.8.9-1) ... Removing libidn2-dev:amd64 (2.3.8-5) ... Removing liblzma-dev:amd64 (5.8.4-1) ... Removing libncurses6:amd64 (6.6+20260608-2) ... Removing libngtcp2-crypto-gnutls8:amd64 (1.24.0-1) ... Removing libxmlsec1-nss10310:amd64 (1.3.10-2) ... Removing libnss3-dev:amd64 (2:3.130-1) ... Removing libnss3:amd64 (2:3.130-1) ... Removing libnspr4-dev (2:4.40-1) ... Removing libnspr4:amd64 (2:4.40-1) ... Removing r-cran-png (0.1-9-1) ... Removing libpython3.14-minimal:amd64 (3.14.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libsqlite3-0:amd64 (3.53.4-2) ... Removing libssl-dev:amd64 (3.6.5-1) ... Removing libtasn1-6-dev:amd64 (4.21.0-2+b1) ... Removing media-types (14.0.0) ... Removing netbase (6.6) ... Removing pyenv-runtime (2.7.1-1) ... Removing r-bioc-s4vectors (0.50.3+dfsg-1) ... Removing r-bioc-matrixgenerics (1.24.0-1) ... Removing r-cran-forcats (1.0.1-1) ... Removing r-cran-tibble (3.3.1+dfsg-2) ... Removing r-cran-corrplot (0.95-2) ... Removing r-cran-cowplot (1.2.0+dfsg-1) ... Removing r-cran-ggrepel (0.9.8-1) ... Removing r-cran-ggplot2 (4.0.3+dfsg-1) ... Removing r-cran-isoband (0.3.0-1) ... Removing r-cran-cpp11 (0.5.5-1) ... Removing r-cran-ellipsis (0.3.3-1) ... Removing r-cran-pheatmap (1.0.13-1) ... Removing r-cran-scales (1.4.0-1) ... Removing r-cran-farver (2.1.2-3) ... Removing r-cran-fnn (1.1.4.1-2) ... Removing r-cran-pillar (1.11.1+dfsg-1) ... Removing r-cran-gtable (0.3.6+dfsg-2) ... Removing r-cran-here (1.0.2-1) ... Removing r-cran-jsonlite (2.0.0+dfsg-2) ... Removing r-cran-labeling (0.4.3-2) ... Removing r-cran-purrr (1.2.2-1) ... Removing r-cran-magrittr (2.0.5-1) ... Removing r-cran-matrixstats (1.5.0-3) ... Removing r-cran-pkgconfig (2.0.3-3) ... Removing r-cran-plyr (1.8.9-2) ... Removing r-cran-r6 (2.6.1-2) ... Removing r-cran-rappdirs (0.3.4-2) ... Removing r-cran-rcolorbrewer (1.1-3-2) ... Removing r-cran-rcppannoy (0.0.23-1) ... Removing r-cran-rcppprogress (0.4.2-3) ... Removing r-cran-rcpptoml (0.2.3+dfsg-3) ... Removing r-cran-rprojroot (2.1.1-3) ... Removing r-cran-s7 (0.2.2-1) ... Removing r-cran-utf8 (1.2.6-2) ... Removing r-cran-viridislite (0.4.3-1) ... Removing r-cran-withr (3.0.3+dfsg-1) ... Removing r-bioc-rhdf5 (2.56.1+dfsg-1) ... Removing r-bioc-rhdf5filters (1.24.1+dfsg-1) ... Removing build-essential (12.12) ... Removing g++ (4:16.1.0-3) ... Removing gcc (4:16.1.0-3) ... Removing dpkg-dev (1.23.11) ... Removing g++-x86-64-linux-gnu (4:16.1.0-3) ... Removing gcc-x86-64-linux-gnu (4:16.1.0-3) ... Removing bzip2 (1.0.8-6+b2) ... Removing r-cran-matrix (1.7-6-1) ... Removing r-cran-vctrs (0.7.3-2) ... Removing r-cran-rcpp (1.1.2-1) ... Removing r-bioc-rhdf5lib (2.0.0+dfsg2-1) ... Removing r-bioc-biocmake (1.4.0+dfsg-1) ... Removing cmake (4.3.4-1) ... Removing cpp (4:16.1.0-3) ... Removing cpp-x86-64-linux-gnu (4:16.1.0-3) ... Removing g++-16 (16.2.0-3) ... Removing g++-16-x86-64-linux-gnu (16.2.0-3) ... Removing libarchive13t64:amd64 (3.8.9-1) ... Removing libstdc++-16-dev:amd64 (16.2.0-3) ... Removing libblosc1:amd64 (1.21.5+ds-2+b2) ... Removing libc6-dev:amd64 (2.43-7) ... Removing libc-dev-bin (2.43-7) ... Removing libdpkg-perl (1.23.11) ... Removing libxmlsec1-10310:amd64 (1.3.10-2) ... Removing libxslt1.1:amd64 (1.1.45-0.1) ... Removing libgcrypt20:amd64 (1.12.4-2) ... Removing perl (5.42.3-1) ... Removing libperl5.42:amd64 (5.42.3-1) ... Removing libgdbm-compat4t64:amd64 (1.26-1+b2) ... Removing libgdbm6t64:amd64 (1.26-1+b2) ... Removing libgnutls30t64:amd64 (3.8.13-1) ... Removing libgpg-error0:amd64 (1.61-5) ... Removing libjsoncpp26:amd64 (1.9.8-2) ... Removing librhash1:amd64 (1.4.6-1.1+b1) ... Removing libsnappy1v5:amd64 (1.3.1-3) ... Removing libtasn1-6:amd64 (4.21.0-2+b1) ... Removing libuv1t64:amd64 (1.52.1-4) ... Removing libxml2-16:amd64 (2.15.4+dfsg-1) ... Removing linux-libc-dev (7.2.9-1) ... Removing make (4.4.1-3) ... Removing patch (2.8-2) ... Removing perl-modules-5.42 (5.42.3-1) ... Removing r-bioc-dir.expiry (1.20.0+dfsg-1) ... Removing r-cran-filelock (1.0.3-2) ... Removing r-cran-glue (1.8.1-2) ... Removing r-cran-lattice (0.23-1-1) ... Removing r-cran-lifecycle (1.0.5+dfsg-1) ... Removing r-cran-littler (0.3.23-1) ... Removing r-cran-pkgkitten (0.2.4-1) ... Removing r-cran-rlang (1.3.0-1) ... Removing xz-utils (5.8.4-1) ... Removing gcc-16 (16.2.0-3) ... Removing binutils (2.47-6) ... Removing libgprofng0:amd64 (2.47-6) ... Removing gcc-16-x86-64-linux-gnu (16.2.0-3) ... Removing binutils-x86-64-linux-gnu (2.47-6) ... Removing libctf0:amd64 (2.47-6) ... Removing libbinutils:amd64 (2.47-6) ... Removing binutils-common:amd64 (2.47-6) ... Removing cpp-16 (16.2.0-3) ... Removing cpp-16-x86-64-linux-gnu (16.2.0-3) ... Removing libgcc-16-dev:amd64 (16.2.0-3) ... Removing libasan8:amd64 (16.2.0-3) ... Removing libcc1-0:amd64 (16.2.0-3) ... Removing libctf-nobfd0:amd64 (2.47-6) ... Removing libp11-kit0:amd64 (0.26.5-1) ... Removing libhwasan0:amd64 (16.2.0-3) ... Removing libisl23:amd64 (0.28-1) ... Removing libitm1:amd64 (16.2.0-3) ... Removing libjansson4:amd64 (2.15.1-1) ... Removing liblsan0:amd64 (16.2.0-3) ... Removing libmpc3:amd64 (1.3.1-3) ... Removing libmpfr6:amd64 (4.2.2-3) ... Removing libquadmath0:amd64 (16.2.0-3) ... Removing libsframe3:amd64 (2.47-6) ... Removing libtsan2:amd64 (16.2.0-3) ... Removing libubsan1:amd64 (16.2.0-3) ... Removing r-bioc-biocgenerics (0.58.1-1) ... Removing r-cran-cli (3.6.6-1) ... Removing r-cran-generics (0.1.4-1) ... Removing r-pkg-team-core-architecture (20260707) ... Removing r-base-core (4.6.1-6) ... Removing ca-certificates (20260816) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libpangocairo-1.0-0:amd64 (1.58.2-1) ... Removing libpangoft2-1.0-0:amd64 (1.58.2-1) ... Removing libpango-1.0-0:amd64 (1.58.2-1) ... Removing fontconfig (2.17.1-5) ... Removing libtk8.6:amd64 (8.6.18-1) ... Removing libxft2:amd64 (2.3.6-1+b5) ... Removing libcairo2:amd64 (1.18.4-3+b1) ... Removing libfontconfig1:amd64 (2.17.1-5) ... Removing fontconfig-config (2.17.1-5) ... Removing fonts-dejavu-core (2.37-9) ... Removing fonts-dejavu-mono (2.37-9) ... Removing libharfbuzz0b:amd64 (12.3.2-2+b2) ... Removing libglib2.0-0t64:amd64 (2.90.0-1) ... Removing libatomic1:amd64 (16.2.0-3) ... Removing liblapack3:amd64 (3.12.1-8) ... Removing libblas3:amd64 (3.12.1-8) ... Removing libfreetype6:amd64 (2.14.3+dfsg-2) ... Removing libcurl4t64:amd64 (8.23.0~rc2-1) ... Removing libbrotli1:amd64 (1.2.0-4+b1) ... Removing libtirpc3t64:amd64 (1.3.7+ds-1) ... Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Removing libgssapi-krb5-2:amd64 (1.22.1-3) ... Removing libkrb5-3:amd64 (1.22.1-3) ... Removing libcom-err2:amd64 (1.47.4-1+b2) ... Removing libthai0:amd64 (0.1.30-3) ... Removing libdatrie1:amd64 (0.2.14-2) ... Removing libtiff6:amd64 (4.7.2-1) ... Removing libdeflate0:amd64 (1.25-1) ... Removing libexpat1:amd64 (2.8.5-2) ... Removing libffi8:amd64 (3.8.0-2) ... Removing libfribidi0:amd64 (1.0.16-5+b1) ... Removing libgfortran5:amd64 (16.2.0-3) ... Removing libgomp1:amd64 (16.2.0-3) ... Removing libgraphite2-3:amd64 (1.3.15-2) ... Removing libxt6t64:amd64 (1:1.2.1-1.3+b2) ... Removing libsm6:amd64 (2:1.2.6-1+b2) ... Removing libice6:amd64 (2:1.1.1-1+b2) ... Removing libicu78:amd64 (78.3-2) ... Removing libpsl5t64:amd64 (0.23.3-1) ... Removing libidn2-0:amd64 (2.3.8-5) ... Removing libjbig0:amd64 (2.1-6.1+b3) ... Removing libjpeg62-turbo:amd64 (1:3.1.3-4) ... Removing libk5crypto3:amd64 (1.22.1-3) ... Removing libkeyutils1:amd64 (1.6.3-6+b2) ... Removing libkrb5support0:amd64 (1.22.1-3) ... Removing libldap2:amd64 (2.6.14+dfsg-2) ... Removing liblerc4:amd64 (4.2.0+ds-1) ... Removing libnghttp2-14:amd64 (1.70.0-1) ... Removing libnghttp3-9:amd64 (1.17.0-1) ... Removing libngtcp2-crypto-ossl0:amd64 (1.24.0-1) ... Removing libngtcp2-16:amd64 (1.24.0-1) ... Removing libpaper-utils (2.2.5-0.4) ... Removing libpaper2:amd64 (2.2.5-0.4) ... Removing libpixman-1-0:amd64 (0.46.4-1+b2) ... Removing libpng16-16t64:amd64 (1.6.59-1) ... Removing libreadline8t64:amd64 (8.3-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsasl2-2:amd64 (2.1.28+dfsg1-11) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-11) ... Removing libwebp7:amd64 (1.6.0-0.1) ... Removing libsharpyuv0:amd64 (1.6.0-0.1) ... Removing libssh2-1t64:amd64 (1.11.1-6) ... Removing libtcl8.6:amd64 (8.6.18+dfsg-1) ... Removing libthai-data (0.1.30-3) ... Removing libtirpc-common (1.3.7+ds-1) ... Removing libunistring5:amd64 (1.4.2-1) ... Removing libxss1:amd64 (1:1.2.3-1+b4) ... Removing libxrender1:amd64 (1:0.9.12-1+b2) ... Removing libxcb-shm0:amd64 (1.17.0-2+b2) ... Removing libxcb-render0:amd64 (1.17.0-2+b2) ... Removing libxext6:amd64 (2:1.3.4-1+b4) ... Removing openssl (3.6.5-1) ... Removing readline-common (8.3-4) ... Removing unzip (6.0-31) ... Removing x11-common (1:7.7+26) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing xdg-utils (1.2.1-2) ... Removing zip (3.0-16) ... Removing libx11-6:amd64 (2:1.8.13-1) ... Removing libx11-data (2:1.8.13-1) ... Removing libxcb1:amd64 (1.17.0-2+b2) ... Removing libxau6:amd64 (1:1.0.11-1+b2) ... Removing libxdmcp6:amd64 (1:1.1.5-2+b1) ... Processing triggers for libc-bin (2.43-7) ... 2m12.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'remove', '--allow-remove-essential', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'build-essential', 'bzip2', 'ca-certificates', 'cmake', 'cpp', 'cpp-16', 'cpp-16-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'curl', 'dpkg-dev', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'g++-', 'g++-16', 'g++-16-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-16', 'gcc-16-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'git', 'git-man', 'libarchive13t64:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libboost-dev:amd64', 'libboost1.90-dev:amd64', 'libbrotli1:amd64', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcc1-0:amd64', 'libcom-err2:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4-gnutls:amd64', 'libcurl4t64:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libdpkg-perl', 'liberror-perl', 'libevent-2.1-7t64:amd64', 'libexpat1:amd64', 'libffi-dev:amd64', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-16-dev:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libgmp-dev:amd64', 'libgmpxx4ldbl:amd64', 'libgnutls-dane0t64:amd64', 'libgnutls28-dev:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhwasan0:amd64', 'libice6:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libidn2-dev:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjsoncpp26:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'liblerc4:amd64', 'liblsan0:amd64', 'liblzma-dev:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libnspr4:amd64', 'libnspr4-dev', 'libnss3:amd64', 'libnss3-dev:amd64', 'libp11-kit-dev:amd64', 'libp11-kit0:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper2:amd64', 'libperl5.42:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libquadmath0:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'librhash1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsframe3:amd64', 'libsharpyuv0:amd64', 'libsm6:amd64', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libsqlite3-dev:amd64', 'libssh2-1t64:amd64', 'libssl-dev:amd64', 'libstdc++-16-dev:amd64', 'libtasn1-6:amd64', 'libtasn1-6-dev:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunbound8:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2-16:amd64', 'libxml2-dev:amd64', 'libxmlsec1-10310:amd64', 'libxmlsec1-dev', 'libxmlsec1-gnutls10310:amd64', 'libxmlsec1-nss10310:amd64', 'libxmlsec1-openssl10310:amd64', 'libxrender1:amd64', 'libxslt1-dev:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'linux-libc-dev', 'make', 'media-types', 'netbase', 'nettle-dev:amd64', 'openssl', 'patch', 'perl', 'perl-modules-5.42', 'pyenv', 'pyenv-runtime', 'python3', 'python3-minimal', 'python3.14', 'python3.14-minimal', 'r-base-core', 'r-bioc-biocgenerics', 'r-bioc-biocmake', 'r-bioc-delayedarray', 'r-bioc-dir.expiry', 'r-bioc-h5mread', 'r-bioc-hdf5array', 'r-bioc-iranges', 'r-bioc-matrixgenerics', 'r-bioc-rhdf5', 'r-bioc-rhdf5filters', 'r-bioc-rhdf5lib', 'r-bioc-s4arrays', 'r-bioc-s4vectors', 'r-bioc-sparsearray', 'r-bioc-xvector', 'r-cran-abind', 'r-cran-bh', 'r-cran-cli', 'r-cran-corrplot', 'r-cran-cowplot', 'r-cran-cpp11', 'r-cran-dplyr', 'r-cran-dqrng', 'r-cran-ellipsis', 'r-cran-farver', 'r-cran-filelock', 'r-cran-fnn', 'r-cran-forcats', 'r-cran-generics', 'r-cran-ggplot2', 'r-cran-ggrepel', 'r-cran-glue', 'r-cran-gtable', 'r-cran-here', 'r-cran-irlba', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-matrix', 'r-cran-matrixstats', 'r-cran-pheatmap', 'r-cran-pillar', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-plyr', 'r-cran-png', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rappdirs', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rcppannoy', 'r-cran-rcppeigen', 'r-cran-rcppprogress', 'r-cran-rcpptoml', 'r-cran-reshape2', 'r-cran-reticulate', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rspectra', 'r-cran-rtsne', 'r-cran-s7', 'r-cran-scales', 'r-cran-sitmo', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-utf8', 'r-cran-uwot', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-withr', 'r-pkg-team-core-architecture', 'readline-common', 'unzip', 'wget', 'x11-common', 'xdg-utils', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'r-bioc-mofa2'] 2m12.5s INFO: Running scripts post_remove 2m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_remove_cleanup'] 2m12.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_remove_cleanup'] 2m12.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_remove_exceptions'] 2m12.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_remove_exceptions'] 2m12.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'build-essential', 'bzip2', 'ca-certificates', 'cmake', 'cpp', 'cpp-16', 'cpp-16-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'curl', 'dpkg-dev', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'g++', 'g++-16', 'g++-16-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-16', 'gcc-16-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'git', 'git-man', 'libarchive13t64:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libboost-dev:amd64', 'libboost1.90-dev:amd64', 'libbrotli1:amd64', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcc1-0:amd64', 'libcom-err2:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4-gnutls:amd64', 'libcurl4t64:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libdpkg-perl', 'liberror-perl', 'libevent-2.1-7t64:amd64', 'libexpat1:amd64', 'libffi-dev:amd64', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-16-dev:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libgmp-dev:amd64', 'libgmpxx4ldbl:amd64', 'libgnutls-dane0t64:amd64', 'libgnutls28-dev:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhwasan0:amd64', 'libice6:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libidn2-dev:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjsoncpp26:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'liblerc4:amd64', 'liblsan0:amd64', 'liblzma-dev:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libnspr4:amd64', 'libnspr4-dev', 'libnss3:amd64', 'libnss3-dev:amd64', 'libp11-kit-dev:amd64', 'libp11-kit0:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper2:amd64', 'libperl5.42:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libquadmath0:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'librhash1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsframe3:amd64', 'libsharpyuv0:amd64', 'libsm6:amd64', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libsqlite3-dev:amd64', 'libssh2-1t64:amd64', 'libssl-dev:amd64', 'libstdc++-16-dev:amd64', 'libtasn1-6:amd64', 'libtasn1-6-dev:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunbound8:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2-16:amd64', 'libxml2-dev:amd64', 'libxmlsec1-10310:amd64', 'libxmlsec1-dev', 'libxmlsec1-gnutls10310:amd64', 'libxmlsec1-nss10310:amd64', 'libxmlsec1-openssl10310:amd64', 'libxrender1:amd64', 'libxslt1-dev:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'linux-libc-dev', 'make', 'media-types', 'netbase', 'nettle-dev:amd64', 'openssl', 'patch', 'perl', 'perl-modules-5.42', 'pyenv', 'pyenv-runtime', 'python3', 'python3-minimal', 'python3.14', 'python3.14-minimal', 'r-base-core', 'r-bioc-biocgenerics', 'r-bioc-biocmake', 'r-bioc-delayedarray', 'r-bioc-dir.expiry', 'r-bioc-h5mread', 'r-bioc-hdf5array', 'r-bioc-iranges', 'r-bioc-matrixgenerics', 'r-bioc-rhdf5', 'r-bioc-rhdf5filters', 'r-bioc-rhdf5lib', 'r-bioc-s4arrays', 'r-bioc-s4vectors', 'r-bioc-sparsearray', 'r-bioc-xvector', 'r-cran-abind', 'r-cran-bh', 'r-cran-cli', 'r-cran-corrplot', 'r-cran-cowplot', 'r-cran-cpp11', 'r-cran-dplyr', 'r-cran-dqrng', 'r-cran-ellipsis', 'r-cran-farver', 'r-cran-filelock', 'r-cran-fnn', 'r-cran-forcats', 'r-cran-generics', 'r-cran-ggplot2', 'r-cran-ggrepel', 'r-cran-glue', 'r-cran-gtable', 'r-cran-here', 'r-cran-irlba', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-matrix', 'r-cran-matrixstats', 'r-cran-pheatmap', 'r-cran-pillar', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-plyr', 'r-cran-png', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rappdirs', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rcppannoy', 'r-cran-rcppeigen', 'r-cran-rcppprogress', 'r-cran-rcpptoml', 'r-cran-reshape2', 'r-cran-reticulate', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rspectra', 'r-cran-rtsne', 'r-cran-s7', 'r-cran-scales', 'r-cran-sitmo', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-utf8', 'r-cran-uwot', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-withr', 'r-pkg-team-core-architecture', 'readline-common', 'unzip', 'wget', 'x11-common', 'xdg-utils', 'xz-utils', 'zip', 'zlib1g-dev:amd64'] 2m13.1s DUMP: (Reading database ... 5549 files and directories currently installed.) Purging configuration files for binutils (2.47-6) ... Purging configuration files for binutils-common:amd64 (2.47-6) ... dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove build-essential which is not installed dpkg: warning: ignoring request to remove bzip2 which is not installed Purging configuration files for ca-certificates (20260816) ... Removing dangling symlinks from /etc/ssl/certs... done. dpkg: warning: ignoring request to remove cmake which is not installed Purging configuration files for cpp (4:16.1.0-3) ... dpkg: warning: ignoring request to remove cpp-16 which is not installed dpkg: warning: ignoring request to remove cpp-16-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove cpp-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove curl which is not installed Purging configuration files for dpkg-dev (1.23.11) ... Purging configuration files for fontconfig (2.17.1-5) ... Purging configuration files for fontconfig-config (2.17.1-5) ... Purging configuration files for fonts-dejavu-core (2.37-9) ... Purging configuration files for fonts-dejavu-mono (2.37-9) ... dpkg: warning: ignoring request to remove g++ which is not installed dpkg: warning: ignoring request to remove g++-16 which is not installed dpkg: warning: ignoring request to remove g++-16-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove g++-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove gcc which is not installed dpkg: warning: ignoring request to remove gcc-16 which is not installed dpkg: warning: ignoring request to remove gcc-16-x86-64-linux-gnu which is not installed dpkg: warning: ignoring request to remove gcc-x86-64-linux-gnu which is not installed Purging configuration files for git (1:2.55.0-1) ... dpkg: warning: ignoring request to remove git-man which is not installed dpkg: warning: ignoring request to remove libarchive13t64 which is not installed dpkg: warning: ignoring request to remove libasan8 which is not installed dpkg: warning: ignoring request to remove libatomic1 which is not installed dpkg: warning: ignoring request to remove libbinutils which is not installed dpkg: warning: ignoring request to remove libblas3 which is not installed dpkg: warning: ignoring request to remove libblosc1 which is not installed dpkg: warning: ignoring request to remove libboost-dev which is not installed dpkg: warning: ignoring request to remove libboost1.90-dev which is not installed dpkg: warning: ignoring request to remove libbrotli1 which is not installed dpkg: warning: ignoring request to remove libbz2-dev which is not installed dpkg: warning: ignoring request to remove libc-dev-bin which is not installed dpkg: warning: ignoring request to remove libc6-dev which is not installed dpkg: warning: ignoring request to remove libcairo2 which is not installed dpkg: warning: ignoring request to remove libcc1-0 which is not installed dpkg: warning: ignoring request to remove libcom-err2 which is not installed dpkg: warning: ignoring request to remove libctf-nobfd0 which is not installed dpkg: warning: ignoring request to remove libctf0 which is not installed dpkg: warning: ignoring request to remove libcurl4-gnutls which is not installed dpkg: warning: ignoring request to remove libcurl4t64 which is not installed dpkg: warning: ignoring request to remove libdatrie1 which is not installed dpkg: warning: ignoring request to remove libdeflate0 which is not installed dpkg: warning: ignoring request to remove libdpkg-perl which is not installed dpkg: warning: ignoring request to remove liberror-perl which is not installed dpkg: warning: ignoring request to remove libevent-2.1-7t64 which is not installed dpkg: warning: ignoring request to remove libexpat1 which is not installed dpkg: warning: ignoring request to remove libffi-dev which is not installed dpkg: warning: ignoring request to remove libffi8 which is not installed dpkg: warning: ignoring request to remove libfontconfig1 which is not installed dpkg: warning: ignoring request to remove libfreetype6 which is not installed dpkg: warning: ignoring request to remove libfribidi0 which is not installed dpkg: warning: ignoring request to remove libgcc-16-dev which is not installed dpkg: warning: ignoring request to remove libgcrypt20 which is not installed dpkg: warning: ignoring request to remove libgdbm-compat4t64 which is not installed dpkg: warning: ignoring request to remove libgdbm6t64 which is not installed dpkg: warning: ignoring request to remove libgfortran5 which is not installed Purging configuration files for libglib2.0-0t64:amd64 (2.90.0-1) ... dpkg: warning: ignoring request to remove libgmp-dev which is not installed dpkg: warning: ignoring request to remove libgmpxx4ldbl which is not installed dpkg: warning: ignoring request to remove libgnutls-dane0t64 which is not installed dpkg: warning: ignoring request to remove libgnutls28-dev which is not installed dpkg: warning: ignoring request to remove libgnutls30t64 which is not installed dpkg: warning: ignoring request to remove libgomp1 which is not installed dpkg: warning: ignoring request to remove libgpg-error0 which is not installed dpkg: warning: ignoring request to remove libgprofng0 which is not installed dpkg: warning: ignoring request to remove libgraphite2-3 which is not installed Purging configuration files for libgssapi-krb5-2:amd64 (1.22.1-3) ... dpkg: warning: ignoring request to remove libharfbuzz0b which is not installed dpkg: warning: ignoring request to remove libhwasan0 which is not installed dpkg: warning: ignoring request to remove libice6 which is not installed dpkg: warning: ignoring request to remove libicu78 which is not installed dpkg: warning: ignoring request to remove libidn2-0 which is not installed dpkg: warning: ignoring request to remove libidn2-dev which is not installed dpkg: warning: ignoring request to remove libisl23 which is not installed dpkg: warning: ignoring request to remove libitm1 which is not installed dpkg: warning: ignoring request to remove libjansson4 which is not installed dpkg: warning: ignoring request to remove libjbig0 which is not installed dpkg: warning: ignoring request to remove libjpeg62-turbo which is not installed dpkg: warning: ignoring request to remove libjsoncpp26 which is not installed dpkg: warning: ignoring request to remove libk5crypto3 which is not installed dpkg: warning: ignoring request to remove libkeyutils1 which is not installed dpkg: warning: ignoring request to remove libkrb5-3 which is not installed dpkg: warning: ignoring request to remove libkrb5support0 which is not installed dpkg: warning: ignoring request to remove liblapack3 which is not installed dpkg: warning: ignoring request to remove libldap2 which is not installed dpkg: warning: ignoring request to remove liblerc4 which is not installed dpkg: warning: ignoring request to remove liblsan0 which is not installed dpkg: warning: ignoring request to remove liblzma-dev which is not installed dpkg: warning: ignoring request to remove libmpc3 which is not installed dpkg: warning: ignoring request to remove libmpfr6 which is not installed dpkg: warning: ignoring request to remove libncurses-dev which is not installed dpkg: warning: ignoring request to remove libncurses6 which is not installed dpkg: warning: ignoring request to remove libnghttp2-14 which is not installed dpkg: warning: ignoring request to remove libnghttp3-9 which is not installed dpkg: warning: ignoring request to remove libngtcp2-16 which is not installed dpkg: warning: ignoring request to remove libngtcp2-crypto-gnutls8 which is not installed dpkg: warning: ignoring request to remove libngtcp2-crypto-ossl0 which is not installed dpkg: warning: ignoring request to remove libnspr4 which is not installed dpkg: warning: ignoring request to remove libnspr4-dev which is not installed dpkg: warning: ignoring request to remove libnss3 which is not installed dpkg: warning: ignoring request to remove libnss3-dev which is not installed dpkg: warning: ignoring request to remove libp11-kit-dev which is not installed dpkg: warning: ignoring request to remove libp11-kit0 which is not installed dpkg: warning: ignoring request to remove libpango-1.0-0 which is not installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which is not installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which is not installed dpkg: warning: ignoring request to remove libpaper-utils which is not installed Purging configuration files for libpaper2:amd64 (2.2.5-0.4) ... dpkg: warning: ignoring request to remove libperl5.42 which is not installed dpkg: warning: ignoring request to remove libpixman-1-0 which is not installed dpkg: warning: ignoring request to remove libpng16-16t64 which is not installed dpkg: warning: ignoring request to remove libpsl5t64 which is not installed dpkg: warning: ignoring request to remove libpython3-stdlib which is not installed Purging configuration files for libpython3.14-minimal:amd64 (3.14.8-1) ... dpkg: warning: ignoring request to remove libpython3.14-stdlib which is not installed dpkg: warning: ignoring request to remove libquadmath0 which is not installed dpkg: warning: ignoring request to remove libreadline-dev which is not installed Purging configuration files for libreadline8t64:amd64 (8.3-4) ... dpkg: warning: ignoring request to remove librhash1 which is not installed dpkg: warning: ignoring request to remove libsasl2-2 which is not installed dpkg: warning: ignoring request to remove libsasl2-modules-db which is not installed dpkg: warning: ignoring request to remove libsframe3 which is not installed dpkg: warning: ignoring request to remove libsharpyuv0 which is not installed dpkg: warning: ignoring request to remove libsm6 which is not installed dpkg: warning: ignoring request to remove libsnappy1v5 which is not installed dpkg: warning: ignoring request to remove libsqlite3-0 which is not installed dpkg: warning: ignoring request to remove libsqlite3-dev which is not installed dpkg: warning: ignoring request to remove libssh2-1t64 which is not installed dpkg: warning: ignoring request to remove libssl-dev which is not installed dpkg: warning: ignoring request to remove libstdc++-16-dev which is not installed dpkg: warning: ignoring request to remove libtasn1-6 which is not installed dpkg: warning: ignoring request to remove libtasn1-6-dev which is not installed dpkg: warning: ignoring request to remove libtcl8.6 which is not installed dpkg: warning: ignoring request to remove libthai-data which is not installed dpkg: warning: ignoring request to remove libthai0 which is not installed dpkg: warning: ignoring request to remove libtiff6 which is not installed Purging configuration files for libtirpc-common (1.3.7+ds-1) ... Purging configuration files for libtirpc3t64:amd64 (1.3.7+ds-1) ... dpkg: warning: ignoring request to remove libtk8.6 which is not installed dpkg: warning: ignoring request to remove libtsan2 which is not installed dpkg: warning: ignoring request to remove libubsan1 which is not installed dpkg: warning: ignoring request to remove libunbound8 which is not installed dpkg: warning: ignoring request to remove libunistring5 which is not installed dpkg: warning: ignoring request to remove libuv1t64 which is not installed dpkg: warning: ignoring request to remove libwebp7 which is not installed dpkg: warning: ignoring request to remove libx11-6 which is not installed dpkg: warning: ignoring request to remove libx11-data which is not installed dpkg: warning: ignoring request to remove libxau6 which is not installed dpkg: warning: ignoring request to remove libxcb-render0 which is not installed dpkg: warning: ignoring request to remove libxcb-shm0 which is not installed dpkg: warning: ignoring request to remove libxcb1 which is not installed dpkg: warning: ignoring request to remove libxdmcp6 which is not installed dpkg: warning: ignoring request to remove libxext6 which is not installed dpkg: warning: ignoring request to remove libxft2 which is not installed dpkg: warning: ignoring request to remove libxml2-16 which is not installed dpkg: warning: ignoring request to remove libxml2-dev which is not installed dpkg: warning: ignoring request to remove libxmlsec1-10310 which is not installed dpkg: warning: ignoring request to remove libxmlsec1-dev which is not installed dpkg: warning: ignoring request to remove libxmlsec1-gnutls10310 which is not installed dpkg: warning: ignoring request to remove libxmlsec1-nss10310 which is not installed dpkg: warning: ignoring request to remove libxmlsec1-openssl10310 which is not installed dpkg: warning: ignoring request to remove libxrender1 which is not installed dpkg: warning: ignoring request to remove libxslt1-dev which is not installed dpkg: warning: ignoring request to remove libxslt1.1 which is not installed dpkg: warning: ignoring request to remove libxss1 which is not installed dpkg: warning: ignoring request to remove libxt6t64 which is not installed dpkg: warning: ignoring request to remove linux-libc-dev which is not installed dpkg: warning: ignoring request to remove make which is not installed Purging configuration files for media-types (14.0.0) ... Purging configuration files for netbase (6.6) ... dpkg: warning: ignoring request to remove nettle-dev which is not installed Purging configuration files for openssl (3.6.5-1) ... dpkg: warning: ignoring request to remove patch which is not installed Purging configuration files for perl (5.42.3-1) ... dpkg: warning: ignoring request to remove perl-modules-5.42 which is not installed dpkg: warning: ignoring request to remove pyenv which is not installed dpkg: warning: ignoring request to remove pyenv-runtime which is not installed Purging configuration files for python3 (3.14.7-3) ... dpkg: warning: ignoring request to remove python3-minimal which is not installed dpkg: warning: ignoring request to remove python3.14 which is not installed Purging configuration files for python3.14-minimal (3.14.8-1) ... Purging configuration files for r-base-core (4.6.1-6) ... dpkg: warning: ignoring request to remove r-bioc-biocgenerics which is not installed dpkg: warning: ignoring request to remove r-bioc-biocmake which is not installed dpkg: warning: ignoring request to remove r-bioc-delayedarray which is not installed dpkg: warning: ignoring request to remove r-bioc-dir.expiry which is not installed dpkg: warning: ignoring request to remove r-bioc-h5mread which is not installed dpkg: warning: ignoring request to remove r-bioc-hdf5array which is not installed dpkg: warning: ignoring request to remove r-bioc-iranges which is not installed dpkg: warning: ignoring request to remove r-bioc-matrixgenerics which is not installed dpkg: warning: ignoring request to remove r-bioc-rhdf5 which is not installed dpkg: warning: ignoring request to remove r-bioc-rhdf5filters which is not installed dpkg: warning: ignoring request to remove r-bioc-rhdf5lib which is not installed dpkg: warning: ignoring request to remove r-bioc-s4arrays which is not installed dpkg: warning: ignoring request to remove r-bioc-s4vectors which is not installed dpkg: warning: ignoring request to remove r-bioc-sparsearray which is not installed dpkg: warning: ignoring request to remove r-bioc-xvector which is not installed dpkg: warning: ignoring request to remove r-cran-abind which is not installed dpkg: warning: ignoring request to remove r-cran-bh which is not installed dpkg: warning: ignoring request to remove r-cran-cli which is not installed dpkg: warning: ignoring request to remove r-cran-corrplot which is not installed dpkg: warning: ignoring request to remove r-cran-cowplot which is not installed dpkg: warning: ignoring request to remove r-cran-cpp11 which is not installed dpkg: warning: ignoring request to remove r-cran-dplyr which is not installed dpkg: warning: ignoring request to remove r-cran-dqrng which is not installed dpkg: warning: ignoring request to remove r-cran-ellipsis which is not installed dpkg: warning: ignoring request to remove r-cran-farver which is not installed dpkg: warning: ignoring request to remove r-cran-filelock which is not installed dpkg: warning: ignoring request to remove r-cran-fnn which is not installed dpkg: warning: ignoring request to remove r-cran-forcats which is not installed dpkg: warning: ignoring request to remove r-cran-generics which is not installed dpkg: warning: ignoring request to remove r-cran-ggplot2 which is not installed dpkg: warning: ignoring request to remove r-cran-ggrepel which is not installed dpkg: warning: ignoring request to remove r-cran-glue which is not installed dpkg: warning: ignoring request to remove r-cran-gtable which is not installed dpkg: warning: ignoring request to remove r-cran-here which is not installed dpkg: warning: ignoring request to remove r-cran-irlba which is not installed dpkg: warning: ignoring request to remove r-cran-isoband which is not installed dpkg: warning: ignoring request to remove r-cran-jsonlite which is not installed dpkg: warning: ignoring request to remove r-cran-labeling which is not installed dpkg: warning: ignoring request to remove r-cran-lattice which is not installed dpkg: warning: ignoring request to remove r-cran-lifecycle which is not installed dpkg: warning: ignoring request to remove r-cran-littler which is not installed dpkg: warning: ignoring request to remove r-cran-magrittr which is not installed dpkg: warning: ignoring request to remove r-cran-matrix which is not installed dpkg: warning: ignoring request to remove r-cran-matrixstats which is not installed dpkg: warning: ignoring request to remove r-cran-pheatmap which is not installed dpkg: warning: ignoring request to remove r-cran-pillar which is not installed dpkg: warning: ignoring request to remove r-cran-pkgconfig which is not installed dpkg: warning: ignoring request to remove r-cran-pkgkitten which is not installed dpkg: warning: ignoring request to remove r-cran-plyr which is not installed dpkg: warning: ignoring request to remove r-cran-png which is not installed dpkg: warning: ignoring request to remove r-cran-purrr which is not installed dpkg: warning: ignoring request to remove r-cran-r6 which is not installed dpkg: warning: ignoring request to remove r-cran-rappdirs which is not installed dpkg: warning: ignoring request to remove r-cran-rcolorbrewer which is not installed dpkg: warning: ignoring request to remove r-cran-rcpp which is not installed dpkg: warning: ignoring request to remove r-cran-rcppannoy which is not installed dpkg: warning: ignoring request to remove r-cran-rcppeigen which is not installed dpkg: warning: ignoring request to remove r-cran-rcppprogress which is not installed dpkg: warning: ignoring request to remove r-cran-rcpptoml which is not installed dpkg: warning: ignoring request to remove r-cran-reshape2 which is not installed dpkg: warning: ignoring request to remove r-cran-reticulate which is not installed dpkg: warning: ignoring request to remove r-cran-rlang which is not installed dpkg: warning: ignoring request to remove r-cran-rprojroot which is not installed dpkg: warning: ignoring request to remove r-cran-rspectra which is not installed dpkg: warning: ignoring request to remove r-cran-rtsne which is not installed dpkg: warning: ignoring request to remove r-cran-s7 which is not installed dpkg: warning: ignoring request to remove r-cran-scales which is not installed dpkg: warning: ignoring request to remove r-cran-sitmo which is not installed dpkg: warning: ignoring request to remove r-cran-stringi which is not installed dpkg: warning: ignoring request to remove r-cran-stringr which is not installed dpkg: warning: ignoring request to remove r-cran-tibble which is not installed dpkg: warning: ignoring request to remove r-cran-tidyr which is not installed dpkg: warning: ignoring request to remove r-cran-tidyselect which is not installed dpkg: warning: ignoring request to remove r-cran-utf8 which is not installed dpkg: warning: ignoring request to remove r-cran-uwot which is not installed dpkg: warning: ignoring request to remove r-cran-vctrs which is not installed dpkg: warning: ignoring request to remove r-cran-viridislite which is not installed dpkg: warning: ignoring request to remove r-cran-withr which is not installed dpkg: warning: ignoring request to remove r-pkg-team-core-architecture which is not installed Purging configuration files for readline-common (8.3-4) ... dpkg: warning: ignoring request to remove unzip which is not installed Purging configuration files for wget (1.25.0-3) ... Purging configuration files for x11-common (1:7.7+26) ... dpkg: warning: ignoring request to remove xdg-utils which is not installed dpkg: warning: ignoring request to remove xz-utils which is not installed dpkg: warning: ignoring request to remove zip which is not installed dpkg: warning: ignoring request to remove zlib1g-dev which is not installed 2m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'build-essential', 'bzip2', 'ca-certificates', 'cmake', 'cpp', 'cpp-16', 'cpp-16-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'curl', 'dpkg-dev', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'g++', 'g++-16', 'g++-16-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-16', 'gcc-16-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'git', 'git-man', 'libarchive13t64:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libboost-dev:amd64', 'libboost1.90-dev:amd64', 'libbrotli1:amd64', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcc1-0:amd64', 'libcom-err2:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4-gnutls:amd64', 'libcurl4t64:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libdpkg-perl', 'liberror-perl', 'libevent-2.1-7t64:amd64', 'libexpat1:amd64', 'libffi-dev:amd64', 'libffi8:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-16-dev:amd64', 'libgcrypt20:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libgmp-dev:amd64', 'libgmpxx4ldbl:amd64', 'libgnutls-dane0t64:amd64', 'libgnutls28-dev:amd64', 'libgnutls30t64:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhwasan0:amd64', 'libice6:amd64', 'libicu78:amd64', 'libidn2-0:amd64', 'libidn2-dev:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjsoncpp26:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'liblerc4:amd64', 'liblsan0:amd64', 'liblzma-dev:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libnspr4:amd64', 'libnspr4-dev', 'libnss3:amd64', 'libnss3-dev:amd64', 'libp11-kit-dev:amd64', 'libp11-kit0:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper2:amd64', 'libperl5.42:amd64', 'libpixman-1-0:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libquadmath0:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'librhash1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsframe3:amd64', 'libsharpyuv0:amd64', 'libsm6:amd64', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libsqlite3-dev:amd64', 'libssh2-1t64:amd64', 'libssl-dev:amd64', 'libstdc++-16-dev:amd64', 'libtasn1-6:amd64', 'libtasn1-6-dev:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libunbound8:amd64', 'libunistring5:amd64', 'libuv1t64:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2-16:amd64', 'libxml2-dev:amd64', 'libxmlsec1-10310:amd64', 'libxmlsec1-dev', 'libxmlsec1-gnutls10310:amd64', 'libxmlsec1-nss10310:amd64', 'libxmlsec1-openssl10310:amd64', 'libxrender1:amd64', 'libxslt1-dev:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6t64:amd64', 'linux-libc-dev', 'make', 'media-types', 'netbase', 'nettle-dev:amd64', 'openssl', 'patch', 'perl', 'perl-modules-5.42', 'pyenv', 'pyenv-runtime', 'python3', 'python3-minimal', 'python3.14', 'python3.14-minimal', 'r-base-core', 'r-bioc-biocgenerics', 'r-bioc-biocmake', 'r-bioc-delayedarray', 'r-bioc-dir.expiry', 'r-bioc-h5mread', 'r-bioc-hdf5array', 'r-bioc-iranges', 'r-bioc-matrixgenerics', 'r-bioc-rhdf5', 'r-bioc-rhdf5filters', 'r-bioc-rhdf5lib', 'r-bioc-s4arrays', 'r-bioc-s4vectors', 'r-bioc-sparsearray', 'r-bioc-xvector', 'r-cran-abind', 'r-cran-bh', 'r-cran-cli', 'r-cran-corrplot', 'r-cran-cowplot', 'r-cran-cpp11', 'r-cran-dplyr', 'r-cran-dqrng', 'r-cran-ellipsis', 'r-cran-farver', 'r-cran-filelock', 'r-cran-fnn', 'r-cran-forcats', 'r-cran-generics', 'r-cran-ggplot2', 'r-cran-ggrepel', 'r-cran-glue', 'r-cran-gtable', 'r-cran-here', 'r-cran-irlba', 'r-cran-isoband', 'r-cran-jsonlite', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-matrix', 'r-cran-matrixstats', 'r-cran-pheatmap', 'r-cran-pillar', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-plyr', 'r-cran-png', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rappdirs', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rcppannoy', 'r-cran-rcppeigen', 'r-cran-rcppprogress', 'r-cran-rcpptoml', 'r-cran-reshape2', 'r-cran-reticulate', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rspectra', 'r-cran-rtsne', 'r-cran-s7', 'r-cran-scales', 'r-cran-sitmo', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-utf8', 'r-cran-uwot', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-withr', 'r-pkg-team-core-architecture', 'readline-common', 'unzip', 'wget', 'x11-common', 'xdg-utils', 'xz-utils', 'zip', 'zlib1g-dev:amd64'] 2m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--purge', 'r-bioc-mofa2'] 2m13.1s DUMP: dpkg: warning: ignoring request to remove r-bioc-mofa2 which is not installed 2m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--purge', 'r-bioc-mofa2'] 2m13.1s INFO: Running scripts post_purge 2m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_purge_exceptions'] 2m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_purge_exceptions'] 2m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_purge_manual_cleanup'] 2m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_purge_manual_cleanup'] 2m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--purge', '--pending'] 2m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--purge', '--pending'] 2m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--remove', '--pending'] 2m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg', '--remove', '--pending'] 2m13.1s INFO: Running scripts post_test 2m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_test_exceptions'] 2m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'tmp/scripts/post_test_exceptions'] 2m13.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 2m13.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 2m13.9s DEBUG: No broken symlinks as far as we can find. 2m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-divert', '--list'] 2m13.9s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 2m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'dpkg-divert', '--list'] 2m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'clean'] 2m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc', 'apt-get', 'clean'] 2m13.9s DEBUG: Recording chroot state 2m15.9s INFO: PASS: Installation and purging test. 2m16.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/shm'] 2m16.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/shm'] 2m16.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/console'] 2m16.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/console'] 2m16.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/ptmx'] 2m16.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/ptmx'] 2m16.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/pts'] 2m16.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/dev/pts'] 2m16.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/proc'] 2m16.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc/proc'] 2m16.4s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 2m16.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpr_fiz9mc'] 2m16.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpr_fiz9mc 2m16.6s INFO: PASS: All tests. 2m16.6s INFO: piuparts run ends. ret=0 End: 2026-10-05 06:05:28 GMT