Start: 2026-09-02 15:24:20 GMT Package: mrbayes Version: 3.2.7a-8 Installed-Size: 2790 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libhmsbeagle1v5 (>= 4.0.1+dfsg), libreadline8t64 (>= 6.0) Suggests: mrbayes-doc Description: Bayesian Inference of Phylogeny Homepage: http://mrbayes.csit.fsu.edu/ Commands: mb Description-md5: 3042004cf4140cc8d89cbd6d7860f485 Section: science Priority: optional Filename: pool/main/m/mrbayes/mrbayes_3.2.7a-8_amd64.deb Size: 699064 MD5sum: 04a2532a1dfeaa1def6fef852ddbc1ef SHA256: 45eda965fac0edb525d6d36d23a331655d5a6739880250ec7333c79af92cc6ea Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts-log-alternatives --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt mrbayes=3.2.7a-8 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202608291513~1.6.0-23-g1172a6e5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts-log-alternatives --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid --no-upgrade-test --apt mrbayes=3.2.7a-8 0m0.0s INFO: Running on: Linux piu-slave-conova-01 6.12.107+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.107-1 (2026-08-29) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpv6p17oab 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpv6p17oab 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/pts'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/pts'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/ptmx'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/ptmx'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/12', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/console'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/12', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/console'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/shm'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/shm'] 0m0.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.3s DEBUG: Created policy-rc.d and chmodded it. 0m0.3s DEBUG: Created resolv.conf. 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts-log-alternatives to /srv/piuparts.debian.org/tmp/tmpv6p17oab/tmp/scripts/ 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpv6p17oab/tmp/scripts/ 0m0.3s INFO: Running scripts post_chroot_unpack 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', 'update'] 0m3.4s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [193 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.8 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7719 kB] Fetched 18.7 MB in 2s (8978 kB/s) Reading package lists... 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', 'update'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', '-yf', 'dist-upgrade'] 0m4.3s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', '-yf', 'dist-upgrade'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.7s DUMP: 6592e9ef89299125b1d03390f895a5ee - 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.7s INFO: Running scripts post_setup 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_dummy_users'] 0m5.2s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_dummy_users'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_forbid_home'] 0m5.2s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_forbid_home'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.2s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_minimize'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_minimize'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_zz_backports'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_setup_zz_backports'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', 'clean'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', 'clean'] 0m5.3s DEBUG: Recording chroot state 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.7s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-3+b1 install ok installed bsdutils bsdutils 1:2.42.2-4 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.7 install ok installed findutils findutils 4.11.0-2 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-1 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu1 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b1 install ok installed libblkid1:amd64 libblkid1 2.42.2-4 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-4 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-4 install ok installed libc6:amd64 libc6 2.43-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.5-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.3-1 install ok installed libmd0:amd64 libmd0 1.2.0-2 install ok installed libmount1:amd64 libmount1 2.42.2-4 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-2 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1 install ok installed libselinux1:amd64 libselinux1 3.11-2 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.2-4 install ok installed libssl3t64:amd64 libssl3t64 3.6.4-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-1 install ok installed libsystemd0:amd64 libsystemd0 262~rc1-2 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 262~rc1-2 install ok installed libuuid1:amd64 libuuid1 2.42.2-4 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.2-4 install ok installed login.defs login.defs 1:4.19.3-2 install ok installed mawk mawk 1.3.4.20260302-1 install ok installed mount mount 2.42.2-4 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.4-1 install ok installed passwd passwd 1:4.19.3-2 install ok installed perl-base perl-base 5.42.3-1 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.4.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-5 install ok installed tzdata tzdata 2026c-1 install ok installed util-linux util-linux 2.42.2-4 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg-divert', '--list'] 0m5.7s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg-divert', '--list'] 0m5.7s INFO: Running scripts is_testable 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/is_testable_uninstallable'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/is_testable_uninstallable'] 0m5.7s INFO: apt-cache does not know about any of the requested packages 0m5.7s INFO: Running scripts pre_test 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_test_exceptions'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_test_exceptions'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_test_root_password'] 0m5.7s DUMP: New password: Retype new password: passwd: password updated successfully 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_test_root_password'] 0m5.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m6.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m6.2s DEBUG: No broken symlinks as far as we can find. 0m6.2s INFO: Running scripts pre_install 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_database-server'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_database-server'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_exceptions'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_exceptions'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_extras'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_extras'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_log_alternatives'] 0m6.2s DUMP: Adding 'local diversion of /usr/bin/update-alternatives to /usr/bin/update-alternatives.orig' dpkg-divert: warning: diverting file '/usr/bin/update-alternatives' from an Essential package with rename is dangerous, use --no-rename 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_install_log_alternatives'] 0m6.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m6.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m6.8s DEBUG: No broken symlinks as far as we can find. 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-cache', 'policy'] 0m7.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-cache', 'policy'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-cache', 'policy', 'mrbayes'] 0m7.7s DUMP: mrbayes: Installed: (none) Candidate: 3.2.7a-8 Version table: 3.2.7a-8 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-cache', 'policy', 'mrbayes'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', '-y', 'install', 'mrbayes=3.2.7a-8'] 0m12.4s DUMP: Reading package lists... Building dependency tree... Solving dependencies... The following additional packages will be installed: libclang-common-21-dev libclang-cpp21 libclc-21 libclc-21-dev libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libexpat1 libffi8 libhmsbeagle1v5 libllvm21 libllvmspirvlib21.1 libreadline8t64 libxml2-16 libz3-4 mesa-opencl-icd ocl-icd-libopencl1 readline-common Suggested packages: mrbayes-doc readline-doc Recommended packages: libclang-rt-21-dev The following NEW packages will be installed: libclang-common-21-dev libclang-cpp21 libclc-21 libclc-21-dev libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libexpat1 libffi8 libhmsbeagle1v5 libllvm21 libllvmspirvlib21.1 libreadline8t64 libxml2-16 libz3-4 mesa-opencl-icd mrbayes ocl-icd-libopencl1 readline-common 0 upgraded, 21 newly installed, 0 to remove and 0 not upgraded. Need to get 73.0 MB of archives. After this operation, 372 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.8.4-1 [130 kB] Get:2 http://deb.debian.org/debian sid/main amd64 readline-common all 8.3-4 [74.8 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libclang-common-21-dev amd64 1:21.1.8-10 [768 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libedit2 amd64 3.1-20260512-1 [93.6 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libffi8 amd64 3.8.0-2 [32.5 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libxml2-16 amd64 2.15.3+dfsg-1+b1 [682 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libz3-4 amd64 4.13.3-1.1 [8644 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libllvm21 amd64 1:21.1.8-10 [28.2 MB] Get:9 http://deb.debian.org/debian sid/main amd64 libclang-cpp21 amd64 1:21.1.8-10 [12.8 MB] Get:10 http://deb.debian.org/debian sid/main amd64 libclc-21-dev all 1:21.1.8-10 [21.5 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libclc-21 all 1:21.1.8-10 [8511 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libdrm-common all 2.4.134-3 [7860 B] Get:13 http://deb.debian.org/debian sid/main amd64 libdrm2 amd64 2.4.134-3 [38.5 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libdrm-amdgpu1 amd64 2.4.134-3 [23.3 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libelf1t64 amd64 0.196-1 [61.2 kB] Get:16 http://deb.debian.org/debian sid/main amd64 ocl-icd-libopencl1 amd64 2.3.4-1+b1 [42.8 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libllvmspirvlib21.1 amd64 21.1.5-1 [956 kB] Get:18 http://deb.debian.org/debian sid/main amd64 mesa-opencl-icd amd64 26.1.6-1 [10.8 MB] Get:19 http://deb.debian.org/debian sid/main amd64 libhmsbeagle1v5 amd64 4.0.1+dfsg-5 [147 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libreadline8t64 amd64 8.3-4 [181 kB] Get:21 http://deb.debian.org/debian sid/main amd64 mrbayes amd64 3.2.7a-8 [699 kB] Fetched 73.0 MB in 0s (167 MB/s) Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4979 files and directories currently installed.) Preparing to unpack .../00-libexpat1_2.8.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.8.4-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_8.3-4_all.deb ... Unpacking readline-common (8.3-4) ... Selecting previously unselected package libclang-common-21-dev:amd64. Preparing to unpack .../02-libclang-common-21-dev_1%3a21.1.8-10_amd64.deb ... Unpacking libclang-common-21-dev:amd64 (1:21.1.8-10) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../03-libedit2_3.1-20260512-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20260512-1) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../04-libffi8_3.8.0-2_amd64.deb ... Unpacking libffi8:amd64 (3.8.0-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../05-libxml2-16_2.15.3+dfsg-1+b1_amd64.deb ... Unpacking libxml2-16:amd64 (2.15.3+dfsg-1+b1) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../06-libz3-4_4.13.3-1.1_amd64.deb ... Unpacking libz3-4:amd64 (4.13.3-1.1) ... Selecting previously unselected package libllvm21:amd64. Preparing to unpack .../07-libllvm21_1%3a21.1.8-10_amd64.deb ... Unpacking libllvm21:amd64 (1:21.1.8-10) ... Selecting previously unselected package libclang-cpp21. Preparing to unpack .../08-libclang-cpp21_1%3a21.1.8-10_amd64.deb ... Unpacking libclang-cpp21 (1:21.1.8-10) ... Selecting previously unselected package libclc-21-dev. Preparing to unpack .../09-libclc-21-dev_1%3a21.1.8-10_all.deb ... Unpacking libclc-21-dev (1:21.1.8-10) ... Selecting previously unselected package libclc-21. Preparing to unpack .../10-libclc-21_1%3a21.1.8-10_all.deb ... Unpacking libclc-21 (1:21.1.8-10) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../11-libdrm-common_2.4.134-3_all.deb ... Unpacking libdrm-common (2.4.134-3) ... Selecting previously unselected package libdrm2:amd64. Preparing to unpack .../12-libdrm2_2.4.134-3_amd64.deb ... Unpacking libdrm2:amd64 (2.4.134-3) ... Selecting previously unselected package libdrm-amdgpu1:amd64. Preparing to unpack .../13-libdrm-amdgpu1_2.4.134-3_amd64.deb ... Unpacking libdrm-amdgpu1:amd64 (2.4.134-3) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../14-libelf1t64_0.196-1_amd64.deb ... Unpacking libelf1t64:amd64 (0.196-1) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../15-ocl-icd-libopencl1_2.3.4-1+b1_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Selecting previously unselected package libllvmspirvlib21.1:amd64. Preparing to unpack .../16-libllvmspirvlib21.1_21.1.5-1_amd64.deb ... Unpacking libllvmspirvlib21.1:amd64 (21.1.5-1) ... Selecting previously unselected package mesa-opencl-icd:amd64. Preparing to unpack .../17-mesa-opencl-icd_26.1.6-1_amd64.deb ... Unpacking mesa-opencl-icd:amd64 (26.1.6-1) ... Selecting previously unselected package libhmsbeagle1v5:amd64. Preparing to unpack .../18-libhmsbeagle1v5_4.0.1+dfsg-5_amd64.deb ... Unpacking libhmsbeagle1v5:amd64 (4.0.1+dfsg-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../19-libreadline8t64_8.3-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-4) ... Selecting previously unselected package mrbayes. Preparing to unpack .../20-mrbayes_3.2.7a-8_amd64.deb ... Unpacking mrbayes (3.2.7a-8) ... Setting up libexpat1:amd64 (2.8.4-1) ... Setting up libxml2-16:amd64 (2.15.3+dfsg-1+b1) ... Setting up libedit2:amd64 (3.1-20260512-1) ... Setting up libelf1t64:amd64 (0.196-1) ... Setting up libz3-4:amd64 (4.13.3-1.1) ... Setting up libclc-21-dev (1:21.1.8-10) ... Setting up libffi8:amd64 (3.8.0-2) ... Setting up ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Setting up libclang-common-21-dev:amd64 (1:21.1.8-10) ... Setting up libdrm-common (2.4.134-3) ... Setting up readline-common (8.3-4) ... Setting up libllvm21:amd64 (1:21.1.8-10) ... Setting up libclc-21 (1:21.1.8-10) ... Setting up libreadline8t64:amd64 (8.3-4) ... Setting up libdrm2:amd64 (2.4.134-3) ... Setting up libdrm-amdgpu1:amd64 (2.4.134-3) ... Setting up libllvmspirvlib21.1:amd64 (21.1.5-1) ... Setting up libclang-cpp21 (1:21.1.8-10) ... Setting up mesa-opencl-icd:amd64 (26.1.6-1) ... Setting up libhmsbeagle1v5:amd64 (4.0.1+dfsg-5) ... Setting up mrbayes (3.2.7a-8) ... Processing triggers for libc-bin (2.43-4) ... 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', '-y', 'install', 'mrbayes=3.2.7a-8'] 0m12.4s INFO: Running scripts post_install 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_install_exceptions'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_install_exceptions'] 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_install_log_alternatives'] 0m12.4s DUMP: Removing 'local diversion of /usr/bin/update-alternatives to /usr/bin/update-alternatives.orig' 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_install_log_alternatives'] 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'systemd-tmpfiles', '--cat-config'] 0m12.4s DUMP: chroot: failed to run command 'systemd-tmpfiles': No such file or directory 0m12.4s DEBUG: Command failed (status=127), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'systemd-tmpfiles', '--cat-config'] 0m12.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m12.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m13.0s ERROR: WARN: Broken symlinks: /usr/lib/clang/21.1.8/lib -> ../../llvm-21/lib/clang/21/lib (libclang-common-21-dev:amd64) /usr/lib/clang/21/lib -> ../../llvm-21/lib/clang/21/lib (libclang-common-21-dev:amd64) 0m13.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', '-ac', '--ignore-obsolete'] 0m14.6s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', '-ac', '--ignore-obsolete'] 0m14.6s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m14.7s DUMP: 0.17.5+b5 0m14.7s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m14.7s INFO: Running adequate version 0.17.5+b5 now. 0m14.7s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'mrbayes'] 0m14.7s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'mrbayes'] 0m14.7s INFO: Running scripts pre_remove 0m14.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m14.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m14.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_exceptions'] 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/pre_remove_exceptions'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m15.5s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-3+b1 install ok installed bsdutils bsdutils 1:2.42.2-4 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.7 install ok installed findutils findutils 4.11.0-2 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-1 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu1 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b1 install ok installed libblkid1:amd64 libblkid1 2.42.2-4 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-4 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-4 install ok installed libc6:amd64 libc6 2.43-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.5-1 install ok installed libclang-common-21-dev:amd64 libclang-common-21-dev 1:21.1.8-10 install ok installed libclang-cpp21 libclang-cpp21 1:21.1.8-10 install ok installed libclc-21 libclc-21 1:21.1.8-10 install ok installed libclc-21-dev libclc-21-dev 1:21.1.8-10 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.134-3 install ok installed libdrm-common libdrm-common 2.4.134-3 install ok installed libdrm2:amd64 libdrm2 2.4.134-3 install ok installed libedit2:amd64 libedit2 3.1-20260512-1 install ok installed libelf1t64:amd64 libelf1t64 0.196-1 install ok installed libexpat1:amd64 libexpat1 2.8.4-1 install ok installed libffi8:amd64 libffi8 3.8.0-2 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libhmsbeagle1v5:amd64 libhmsbeagle1v5 4.0.1+dfsg-5 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed libllvm21:amd64 libllvm21 1:21.1.8-10 install ok installed libllvmspirvlib21.1:amd64 libllvmspirvlib21.1 21.1.5-1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.3-1 install ok installed libmd0:amd64 libmd0 1.2.0-2 install ok installed libmount1:amd64 libmount1 2.42.2-4 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-2 install ok installed libreadline8t64:amd64 libreadline8t64 8.3-4 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1 install ok installed libselinux1:amd64 libselinux1 3.11-2 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.2-4 install ok installed libssl3t64:amd64 libssl3t64 3.6.4-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-1 install ok installed libsystemd0:amd64 libsystemd0 262~rc1-2 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 262~rc1-2 install ok installed libuuid1:amd64 libuuid1 2.42.2-4 install ok installed libxml2-16:amd64 libxml2-16 2.15.3+dfsg-1+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libz3-4:amd64 libz3-4 4.13.3-1.1 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.2-4 install ok installed login.defs login.defs 1:4.19.3-2 install ok installed mawk mawk 1.3.4.20260302-1 install ok installed mesa-opencl-icd:amd64 mesa-opencl-icd 26.1.6-1 install ok installed mount mount 2.42.2-4 install ok installed mrbayes mrbayes 3.2.7a-8 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.3.4-1+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.4-1 install ok installed passwd passwd 1:4.19.3-2 install ok installed perl-base perl-base 5.42.3-1 install ok installed readline-common readline-common 8.3-4 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.4.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-5 install ok installed tzdata tzdata 2026c-1 install ok installed util-linux util-linux 2.42.2-4 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', 'remove', '--allow-remove-essential', 'libclang-common-21-dev:amd64', 'libclang-cpp21', 'libclc-21', 'libclc-21-dev', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libhmsbeagle1v5:amd64', 'libllvm21:amd64', 'libllvmspirvlib21.1:amd64', 'libreadline8t64:amd64', 'libxml2-16:amd64', 'libz3-4:amd64', 'mesa-opencl-icd:amd64', 'ocl-icd-libopencl1:amd64', 'readline-common', 'mrbayes'] 0m16.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: libclang-common-21-dev libclang-cpp21 libclc-21 libclc-21-dev libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libexpat1 libffi8 libhmsbeagle1v5 libllvm21 libllvmspirvlib21.1 libreadline8t64 libxml2-16 libz3-4 mesa-opencl-icd mrbayes ocl-icd-libopencl1 readline-common 0 upgraded, 0 newly installed, 21 to remove and 0 not upgraded. After this operation, 372 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5591 files and directories currently installed.) Removing mrbayes (3.2.7a-8) ... Removing libhmsbeagle1v5:amd64 (4.0.1+dfsg-5) ... Removing mesa-opencl-icd:amd64 (26.1.6-1) ... Removing libclc-21 (1:21.1.8-10) ... Removing libclang-common-21-dev:amd64 (1:21.1.8-10) ... Removing libclang-cpp21 (1:21.1.8-10) ... Removing libclc-21-dev (1:21.1.8-10) ... Removing libdrm-amdgpu1:amd64 (2.4.134-3) ... Removing libdrm2:amd64 (2.4.134-3) ... Removing libdrm-common (2.4.134-3) ... Removing libllvmspirvlib21.1:amd64 (21.1.5-1) ... Removing libllvm21:amd64 (1:21.1.8-10) ... Removing libedit2:amd64 (3.1-20260512-1) ... Removing libelf1t64:amd64 (0.196-1) ... Removing libexpat1:amd64 (2.8.4-1) ... Removing libffi8:amd64 (3.8.0-2) ... Removing libreadline8t64:amd64 (8.3-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libxml2-16:amd64 (2.15.3+dfsg-1+b1) ... Removing libz3-4:amd64 (4.13.3-1.1) ... Removing ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Removing readline-common (8.3-4) ... Processing triggers for libc-bin (2.43-4) ... 0m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', 'remove', '--allow-remove-essential', 'libclang-common-21-dev:amd64', 'libclang-cpp21', 'libclc-21', 'libclc-21-dev', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libhmsbeagle1v5:amd64', 'libllvm21:amd64', 'libllvmspirvlib21.1:amd64', 'libreadline8t64:amd64', 'libxml2-16:amd64', 'libz3-4:amd64', 'mesa-opencl-icd:amd64', 'ocl-icd-libopencl1:amd64', 'readline-common', 'mrbayes'] 0m16.9s INFO: Running scripts post_remove 0m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_remove_exceptions'] 0m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_remove_exceptions'] 0m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg', '--purge', 'libclang-common-21-dev:amd64', 'libclang-cpp21', 'libclc-21', 'libclc-21-dev', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libhmsbeagle1v5:amd64', 'libllvm21:amd64', 'libllvmspirvlib21.1:amd64', 'libreadline8t64:amd64', 'libxml2-16:amd64', 'libz3-4:amd64', 'mesa-opencl-icd:amd64', 'ocl-icd-libopencl1:amd64', 'readline-common'] 0m16.9s DUMP: dpkg: warning: ignoring request to remove libclang-common-21-dev which is not installed dpkg: warning: ignoring request to remove libclang-cpp21 which is not installed dpkg: warning: ignoring request to remove libclc-21 which is not installed dpkg: warning: ignoring request to remove libclc-21-dev which is not installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which is not installed dpkg: warning: ignoring request to remove libdrm-common which is not installed dpkg: warning: ignoring request to remove libdrm2 which is not installed dpkg: warning: ignoring request to remove libedit2 which is not installed dpkg: warning: ignoring request to remove libelf1t64 which is not installed dpkg: warning: ignoring request to remove libexpat1 which is not installed dpkg: warning: ignoring request to remove libffi8 which is not installed dpkg: warning: ignoring request to remove libhmsbeagle1v5 which is not installed dpkg: warning: ignoring request to remove libllvm21 which is not installed dpkg: warning: ignoring request to remove libllvmspirvlib21.1 which is not installed (Reading database ... 4981 files and directories currently installed.) Purging configuration files for libreadline8t64:amd64 (8.3-4) ... dpkg: warning: ignoring request to remove libxml2-16 which is not installed dpkg: warning: ignoring request to remove libz3-4 which is not installed Purging configuration files for mesa-opencl-icd:amd64 (26.1.6-1) ... dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which is not installed Purging configuration files for readline-common (8.3-4) ... 0m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg', '--purge', 'libclang-common-21-dev:amd64', 'libclang-cpp21', 'libclc-21', 'libclc-21-dev', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libhmsbeagle1v5:amd64', 'libllvm21:amd64', 'libllvmspirvlib21.1:amd64', 'libreadline8t64:amd64', 'libxml2-16:amd64', 'libz3-4:amd64', 'mesa-opencl-icd:amd64', 'ocl-icd-libopencl1:amd64', 'readline-common'] 0m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg', '--purge', 'mrbayes'] 0m16.9s DUMP: dpkg: warning: ignoring request to remove mrbayes which is not installed 0m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg', '--purge', 'mrbayes'] 0m16.9s INFO: Running scripts post_purge 0m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_purge_exceptions'] 0m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_purge_exceptions'] 0m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg', '--purge', '--pending'] 0m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg', '--purge', '--pending'] 0m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg', '--remove', '--pending'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg', '--remove', '--pending'] 0m17.0s INFO: Running scripts post_test 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_test_exceptions'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'tmp/scripts/post_test_exceptions'] 0m17.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m17.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m17.5s DEBUG: No broken symlinks as far as we can find. 0m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg-divert', '--list'] 0m17.5s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'dpkg-divert', '--list'] 0m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', 'clean'] 0m17.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpv6p17oab', 'apt-get', 'clean'] 0m17.6s DEBUG: Recording chroot state 0m18.2s INFO: PASS: Installation and purging test. 0m18.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/shm'] 0m18.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/shm'] 0m18.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/console'] 0m18.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/console'] 0m18.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/ptmx'] 0m18.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/ptmx'] 0m18.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/pts'] 0m18.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/dev/pts'] 0m18.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/proc'] 0m18.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpv6p17oab/proc'] 0m18.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m18.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpv6p17oab'] 0m18.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpv6p17oab 0m18.7s INFO: PASS: All tests. 0m18.7s INFO: piuparts run ends. ret=0 End: 2026-09-02 15:24:39 GMT