Start: 2026-11-14 03:19:36 GMT [sid] Package: q2-types Version: 2024.5.0-1 Installed-Size: 50878 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3:any, python3-setuptools, python3-skbio, python3-numpy, python3-pandas, python3-biom-format, python3-ijson, python3-h5py, libopenblas0, qiime (>= 2024.5) Description: QIIME 2 plugin defining types for microbiome analysis Homepage: https://qiime2.org/ Description-md5: 598b2941d3b1cd43d3c10ff16a71fbef Section: science Priority: optional Filename: pool/main/q/q2-types/q2-types_2024.5.0-1_all.deb Size: 5531308 MD5sum: 6dc2a0f27bc7db26a8a908546973c8c8 SHA256: 951ae37ee10d2aa31c826c968cffa88b4c64447c643266b49d0dd7f19575c085 [experimental] Package: q2-types Version: 2026.10.0+dfsg-1 Installed-Size: 7735 Maintainer: Debian Med Packaging Team Architecture: all Depends: libopenblas0, python3-biom-format, python3-h5py, python3-ijson, python3-numpy, python3-pandas, python3-skbio, qiime (>= 2026.10), python3:any Description: QIIME 2 plugin defining types for microbiome analysis Homepage: https://qiime2.org/ Description-md5: 9e1c7ebcaea2dba02eee7928a88a617c Section: science Priority: optional Filename: pool/main/q/q2-types/q2-types_2026.10.0+dfsg-1_all.deb Size: 964752 MD5sum: 22a1f347af3cae57927ee5e7bdc958ee SHA256: ca70bcd80755d6e92227c76a8a68b9808f6f14f54704661f1552eae1ff675be8 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid -d experimental -B /srv/piuparts.debian.org/slave/refchroot/sid2experimental/reference-chroot-metadata.dat --apt q2-types=2026.10.0+dfsg-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202608291513~1.6.0-23-g1172a6e5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz -d sid -d experimental -B /srv/piuparts.debian.org/slave/refchroot/sid2experimental/reference-chroot-metadata.dat --apt q2-types=2026.10.0+dfsg-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 6.12.116+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.116-1 (2026-11-07) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpsbj_e5p3 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpsbj_e5p3 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/sid-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/proc'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/proc'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/15', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/15', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpsbj_e5p3/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', 'update'] 0m3.4s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [193 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.9 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7790 kB] Fetched 18.9 MB in 2s (9451 kB/s) Reading package lists... 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', 'update'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-yf', 'dist-upgrade'] 0m4.2s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-yf', 'dist-upgrade'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.9s DUMP: 49356bd05a626d6c35d8673fd96b7eea - 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.9s INFO: Running scripts post_setup 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_dummy_users'] 0m5.5s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_dummy_users'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_forbid_home'] 0m5.5s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_forbid_home'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.5s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_minimize'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_minimize'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_zz_backports'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_setup_zz_backports'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.5s DUMP: install ok installed apt apt 3.3.7 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4+b1 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed coreutils coreutils 9.12-0.3 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.12 install ok installed findutils findutils 4.11.0-3 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-4 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.7 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.2.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.2.1-1+b1 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-7 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-7 install ok installed libc6:amd64 libc6 2.43-7 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1+b1 install ok installed libcap2:amd64 libcap2 1:2.78-1+b2 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-12 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-4 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.49-1 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b2 install ok installed libselinux1:amd64 libselinux1 3.11-2.1+b1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b2 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libssl3t64:amd64 libssl3t64 3.6.5-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-4 install ok installed libsystemd0:amd64 libsystemd0 262.2-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 262.2-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.3-1 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed mount mount 2.42.4-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.5-1 install ok installed passwd passwd 1:4.20.3-1 install ok installed perl-base perl-base 5.44.0-3 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-2 install ok installed tar tar 1.35+dfsg-7 install ok installed tzdata tzdata 2026f-1 install ok installed util-linux util-linux 2.42.4-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-4 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.5s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/sid2experimental/reference-chroot-metadata.dat 0m5.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 0m5.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 0m5.9s INFO: Running scripts is_testable 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/is_testable_uninstallable'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/is_testable_uninstallable'] 0m5.9s INFO: Running scripts pre_test 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_test_exceptions'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_test_exceptions'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_test_root_password'] 0m5.9s DUMP: New password: Retype new password: passwd: password updated successfully 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_test_root_password'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'show', '--no-all-versions', 'q2-types'] 0m6.2s DUMP: Package: q2-types Version: 2024.5.0-1 Installed-Size: 50878 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3:any, python3-setuptools, python3-skbio, python3-numpy, python3-pandas, python3-biom-format, python3-ijson, python3-h5py, libopenblas0, qiime (>= 2024.5) Description-en: QIIME 2 plugin defining types for microbiome analysis QIIME 2 is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results. Key features: * Integrated and automatic tracking of data provenance * Semantic type system * Plugin system for extending microbiome analysis functionality * Support for multiple types of user interfaces (e.g. API, command line, graphical) . QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis pipeline. QIIME 2 will address many of the limitations of QIIME 1, while retaining the features that makes QIIME 1 a powerful and widely-used analysis pipeline. . QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline. New functionality will regularly become available through QIIME 2 plugins. You can view a list of plugins that are currently available on the QIIME 2 plugin availability page. The future plugins page lists plugins that are being developed. Description-md5: 598b2941d3b1cd43d3c10ff16a71fbef Homepage: https://qiime2.org/ Section: science Priority: optional Filename: pool/main/q/q2-types/q2-types_2024.5.0-1_all.deb Size: 5531308 MD5sum: 6dc2a0f27bc7db26a8a908546973c8c8 SHA256: 951ae37ee10d2aa31c826c968cffa88b4c64447c643266b49d0dd7f19575c085 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'show', '--no-all-versions', 'q2-types'] 0m6.2s INFO: apt-cache knows about the following packages: q2-types 0m6.2s INFO: Running scripts pre_install 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_database-server'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_database-server'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_exceptions'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_exceptions'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_extras'] 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_extras'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy'] 0m6.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy', 'q2-types'] 0m6.3s DUMP: q2-types: Installed: (none) Candidate: 2024.5.0-1 Version table: 2024.5.0-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy', 'q2-types'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-y', 'install', 'q2-types'] 0m48.9s DUMP: Reading package lists... Building dependency tree... Solving dependencies... The following additional packages will be installed: ca-certificates javascript-common libblas3 libcom-err2 libexpat1 libffi8 libgcrypt20 libgfortran5 libgomp1 libgpg-error0 libgssapi-krb5-2 libhdf5-320 libhdf5-hl-320 libjs-bootstrap4 libjs-jquery libjs-popper.js libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblzf1 libncursesw6 libnorm1t64 libopenblas0 libopenblas0-pthread libpgm-5.3-0t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libqhull-r8.0 libreadline8t64 libsodium26 libsqlite3-0 libsz2 libxml2-16 libxslt1.1 libyajl2 libyaml-0-2 libzmq5 media-types netbase node-fortawesome-fontawesome-free openssl python3 python3-array-api-compat python3-bibtexparser python3-biom-format python3-blinker python3-certifi python3-cffi-backend python3-chardet python3-charset-normalizer python3-click python3-dateutil python3-decorator python3-dill python3-filelock python3-flask python3-flask-sqlalchemy python3-flufl.lock python3-greenlet python3-h5py python3-h5py-serial python3-hdmedians python3-idna python3-ijson python3-itsdangerous python3-jinja2 python3-lxml python3-markupsafe python3-minimal python3-networkx python3-numpy python3-numpy-dev python3-packaging python3-pandas python3-pandas-lib python3-parsl python3-patsy python3-platformdirs python3-psutil python3-public python3-pyparsing python3-pytz python3-requests python3-scipy python3-setproctitle python3-setuptools python3-skbio python3-sortedcontainers python3-sqlalchemy python3-statsmodels python3-statsmodels-lib python3-tblib python3-tomlkit python3-typeguard python3-typing-extensions python3-tzlocal python3-urllib3 python3-werkzeug python3-yaml python3-zmq python3.14 python3.14-minimal qiime readline-common Suggested packages: apache2 | lighttpd | httpd rng-tools krb5-doc krb5-user python3-doc python3-tk python3-venv python-biom-format-doc python-blinker-doc python-charset-normalizer-doc python3-objgraph python-flask-doc python-flufl.lock-doc python-greenlet-dev python-greenlet-doc python-h5py-doc python-jinja2-doc python-lxml-doc gcc gfortran python-numpy-doc python3-dev python3-pytest python-pandas-doc python-patsy-doc python-public-doc python-pyparsing-doc python3-cryptography python3-openssl python3-socks python-requests-doc python-scipy-doc python-setuptools-doc python-skbio-doc python-sortedcontainers-doc python-sqlalchemy-doc python3-asyncpg python3-pg8000 python3-psycopg2 python3-psycopg2cffi python3-aiosqlite python3-mariadb-connector python3-mysqldb python3-mysql.connector python3-pyodbc python3-pymssql python3-cx-oracle python3-oracledb python-statsmodels-doc python-typing-extensions-doc python3-brotli ipython3 python-werkzeug-doc python3-watchdog python3.14-venv python3.14-doc binutils binfmt-support readline-doc Recommended packages: libgpg-error-l10n node-jquery krb5-locales libgpm2 python3-asgiref python3-dotenv python3-babel python3-bs4 python3-cssselect python3-html5lib python3-gdal python3-matplotlib python3-pydot python3-pygraphviz python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-tables python3-numba r-cran-plotly g++ | c++-compiler python3-pil python3-pooch python3-sqlalchemy-ext python3-joblib python3-colorama python3-cvxopt python3-openssl python3-pyinotify q2cli q2templates q2-cutadapt q2-metadata q2-demux q2-quality-filter q2-feature-classifier q2-feature-table The following NEW packages will be installed: ca-certificates javascript-common libblas3 libcom-err2 libexpat1 libffi8 libgcrypt20 libgfortran5 libgomp1 libgpg-error0 libgssapi-krb5-2 libhdf5-320 libhdf5-hl-320 libjs-bootstrap4 libjs-jquery libjs-popper.js libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblzf1 libncursesw6 libnorm1t64 libopenblas0 libopenblas0-pthread libpgm-5.3-0t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libqhull-r8.0 libreadline8t64 libsodium26 libsqlite3-0 libsz2 libxml2-16 libxslt1.1 libyajl2 libyaml-0-2 libzmq5 media-types netbase node-fortawesome-fontawesome-free openssl python3 python3-array-api-compat python3-bibtexparser python3-biom-format python3-blinker python3-certifi python3-cffi-backend python3-chardet python3-charset-normalizer python3-click python3-dateutil python3-decorator python3-dill python3-filelock python3-flask python3-flask-sqlalchemy python3-flufl.lock python3-greenlet python3-h5py python3-h5py-serial python3-hdmedians python3-idna python3-ijson python3-itsdangerous python3-jinja2 python3-lxml python3-markupsafe python3-minimal python3-networkx python3-numpy python3-numpy-dev python3-packaging python3-pandas python3-pandas-lib python3-parsl python3-patsy python3-platformdirs python3-psutil python3-public python3-pyparsing python3-pytz python3-requests python3-scipy python3-setproctitle python3-setuptools python3-skbio python3-sortedcontainers python3-sqlalchemy python3-statsmodels python3-statsmodels-lib python3-tblib python3-tomlkit python3-typeguard python3-typing-extensions python3-tzlocal python3-urllib3 python3-werkzeug python3-yaml python3-zmq python3.14 python3.14-minimal q2-types qiime readline-common 0 upgraded, 108 newly installed, 0 to remove and 0 not upgraded. Need to get 112 MB of archives. After this operation, 654 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.10.0-1 [135 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libpython3.14-minimal amd64 3.14.10-1 [905 kB] Get:3 http://deb.debian.org/debian sid/main amd64 python3.14-minimal amd64 3.14.10-1 [2734 kB] Get:4 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.14.8-1 [25.8 kB] Get:5 http://deb.debian.org/debian sid/main amd64 media-types all 14.0.0 [30.8 kB] Get:6 http://deb.debian.org/debian sid/main amd64 netbase all 6.6 [10.3 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libffi8 amd64 3.8.0-2 [32.5 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.6+20260608-2 [137 kB] Get:9 http://deb.debian.org/debian sid/main amd64 readline-common all 8.3-4 [74.8 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libreadline8t64 amd64 8.3-4 [181 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.54.1-2 [1020 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libpython3.14-stdlib amd64 3.14.10-1 [2360 kB] Get:13 http://deb.debian.org/debian sid/main amd64 python3.14 amd64 3.14.10-1 [884 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.14.8-1 [8520 B] Get:15 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.14.8-1 [26.3 kB] Get:16 http://deb.debian.org/debian sid/main amd64 python3-numpy-dev amd64 1:2.4.6+ds-5+b1 [137 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.12.1-8 [206 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 16.2.0-4 [877 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libopenblas0-pthread amd64 0.3.34+ds-2 [7074 kB] Get:20 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.12.1-8 [2548 kB] Get:21 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:2.4.6+ds-5+b1 [7252 kB] Get:22 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.6.5-1 [1554 kB] Get:23 http://deb.debian.org/debian sid/main amd64 ca-certificates all 20260816+nmu1 [134 kB] Get:24 http://deb.debian.org/debian sid/main amd64 javascript-common all 12+nmu1 [4864 B] Get:25 http://deb.debian.org/debian sid/main amd64 libcom-err2 amd64 1.47.4-1+b3 [19.6 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libgpg-error0 amd64 1.61-5 [93.1 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libgcrypt20 amd64 1.12.4-2 [936 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 16.2.0-4 [151 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.22.1-3 [31.1 kB] Get:30 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.22.1-3 [79.0 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-6+b2 [9348 B] Get:32 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.22.1-3 [335 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.22.1-3 [137 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libsz2 amd64 1.1.8-1 [20.0 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libhdf5-320 amd64 2.2.0+repack-6 [2175 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-320 amd64 2.2.0+repack-6 [82.3 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libjs-popper.js all 1.16.1+ds-7 [52.3 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libjs-bootstrap4 all 4.6.2+dfsg-3 [485 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Get:40 http://deb.debian.org/debian sid/main amd64 liblzf1 amd64 3.6-4+b4 [10.1 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libnorm1t64 amd64 1.5.9+dfsg-4+b1 [225 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libopenblas0 amd64 0.3.34+ds-2 [47.1 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-3 [163 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libqhull-r8.0 amd64 2020.2-9 [248 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libsodium26 amd64 1.0.22-2 [210 kB] Get:46 http://deb.debian.org/debian sid/main amd64 libxml2-16 amd64 2.15.4+dfsg-1+b1 [684 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libxslt1.1 amd64 1.1.45-0.1 [158 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libyajl2 amd64 2.1.0-7 [23.9 kB] Get:49 http://deb.debian.org/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-2+b1 [53.8 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libzmq5 amd64 4.3.5-1+b8 [312 kB] Get:51 http://deb.debian.org/debian sid/main amd64 node-fortawesome-fontawesome-free all 7.3.1+ds1-1 [2654 kB] Get:52 http://deb.debian.org/debian sid/main amd64 python3-array-api-compat all 1.11.2-1 [37.8 kB] Get:53 http://deb.debian.org/debian sid/main amd64 python3-pyparsing all 3.3.3-2 [168 kB] Get:54 http://deb.debian.org/debian sid/main amd64 python3-bibtexparser all 2.0.0b5+really1.4.4-1 [33.9 kB] Get:55 http://deb.debian.org/debian sid/main amd64 python3-h5py-serial amd64 3.16.0-8 [1517 kB] 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[9956 B] Get:67 http://deb.debian.org/debian sid/main amd64 python3-cffi-backend amd64 2.1.1-2 [107 kB] Get:68 http://deb.debian.org/debian sid/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get:69 http://deb.debian.org/debian sid/main amd64 python3-charset-normalizer amd64 3.4.7-2+b3 [224 kB] Get:70 http://deb.debian.org/debian sid/main amd64 python3-dill all 0.4.1-2 [83.4 kB] Get:71 http://deb.debian.org/debian sid/main amd64 python3-filelock all 4.2.8-1 [141 kB] Get:72 http://deb.debian.org/debian sid/main amd64 python3-itsdangerous all 2.2.0-4 [17.5 kB] Get:73 http://deb.debian.org/debian sid/main amd64 python3-markupsafe amd64 3.0.3-2+b2 [14.0 kB] Get:74 http://deb.debian.org/debian sid/main amd64 python3-jinja2 all 3.1.6-4 [106 kB] Get:75 http://deb.debian.org/debian sid/main amd64 python3-werkzeug all 3.1.9-1 [210 kB] Get:76 http://deb.debian.org/debian sid/main amd64 python3-flask all 3.1.3-4 [106 kB] Get:77 http://deb.debian.org/debian sid/main amd64 python3-greenlet amd64 3.3.2-5 [181 kB] Get:78 http://deb.debian.org/debian sid/main amd64 python3-typing-extensions all 4.16.0-5 [95.2 kB] Get:79 http://deb.debian.org/debian sid/main amd64 python3-sqlalchemy all 2.0.52+ds1-1 [1240 kB] Get:80 http://deb.debian.org/debian sid/main amd64 python3-flask-sqlalchemy all 3.1.1-5 [34.5 kB] Get:81 http://deb.debian.org/debian sid/main amd64 python3-psutil amd64 7.2.2-3 [140 kB] Get:82 http://deb.debian.org/debian sid/main amd64 python3-public all 7.0.0-1 [7464 B] Get:83 http://deb.debian.org/debian sid/main amd64 python3-flufl.lock all 9.1.0-1 [15.1 kB] Get:84 http://deb.debian.org/debian sid/main amd64 python3-hdmedians amd64 0.14.2-6+b4 [167 kB] Get:85 http://deb.debian.org/debian sid/main amd64 python3-idna all 3.20-1 [45.8 kB] Get:86 http://deb.debian.org/debian sid/main amd64 python3-ijson amd64 3.6.0-1 [46.2 kB] Get:87 http://deb.debian.org/debian sid/main amd64 python3-lxml amd64 6.1.3-1.1 [1949 kB] Get:88 http://deb.debian.org/debian sid/main amd64 python3-networkx all 3.4.2-7 [23.9 MB] Get:89 http://deb.debian.org/debian sid/main amd64 python3-packaging all 26.3-1 [110 kB] Get:90 http://deb.debian.org/debian sid/main amd64 python3-urllib3 all 2.8.0-2 [125 kB] Get:91 http://deb.debian.org/debian sid/main amd64 python3-requests all 2.34.2-1 [77.6 kB] Get:92 http://deb.debian.org/debian sid/main amd64 python3-setproctitle amd64 1.3.8-1+b1 [18.7 kB] Get:93 http://deb.debian.org/debian sid/main amd64 python3-sortedcontainers all 2.4.0-3 [31.3 kB] Get:94 http://deb.debian.org/debian sid/main amd64 python3-tblib all 3.2.2-1 [15.1 kB] Get:95 http://deb.debian.org/debian sid/main amd64 python3-typeguard all 4.6.0-1 [39.9 kB] Get:96 http://deb.debian.org/debian sid/main amd64 python3-zmq amd64 27.1.0-1+b3 [198 kB] Get:97 http://deb.debian.org/debian sid/main amd64 python3-parsl all 2026.08.10+ds-1 [294 kB] Get:98 http://deb.debian.org/debian sid/main amd64 python3-patsy all 1.0.3-1 [172 kB] Get:99 http://deb.debian.org/debian sid/main amd64 python3-platformdirs all 4.14.5-1 [27.2 kB] Get:100 http://deb.debian.org/debian sid/main amd64 python3-setuptools all 84.2.0-1 [602 kB] Get:101 http://deb.debian.org/debian sid/main amd64 python3-statsmodels-lib amd64 0.15.0+dfsg-2 [1829 kB] Get:102 http://deb.debian.org/debian sid/main amd64 python3-statsmodels all 0.15.0+dfsg-2 [5943 kB] Get:103 http://deb.debian.org/debian sid/main amd64 python3-skbio amd64 0.7.4-2+b1 [1611 kB] Get:104 http://deb.debian.org/debian sid/main amd64 python3-tomlkit all 0.13.3-3 [44.1 kB] Get:105 http://deb.debian.org/debian sid/main amd64 python3-tzlocal all 5.4.5-1 [24.1 kB] Get:106 http://deb.debian.org/debian sid/main amd64 python3-yaml amd64 6.0.3-1+b2 [161 kB] Get:107 http://deb.debian.org/debian sid/main amd64 qiime all 2024.5.0-1 [304 kB] Get:108 http://deb.debian.org/debian sid/main amd64 q2-types all 2024.5.0-1 [5531 kB] Preconfiguring packages ... Fetched 112 MB in 1s (118 MB/s) Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4983 files and directories currently installed.) Preparing to unpack .../libexpat1_2.10.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.10.0-1) ... Selecting previously unselected package libpython3.14-minimal:amd64. Preparing to unpack .../libpython3.14-minimal_3.14.10-1_amd64.deb ... Unpacking libpython3.14-minimal:amd64 (3.14.10-1) ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../07-libsqlite3-0_3.54.1-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.54.1-2) ... Selecting previously unselected package libpython3.14-stdlib:amd64. Preparing to unpack .../08-libpython3.14-stdlib_3.14.10-1_amd64.deb ... Unpacking libpython3.14-stdlib:amd64 (3.14.10-1) ... Selecting previously unselected package python3.14. Preparing to unpack .../09-python3.14_3.14.10-1_amd64.deb ... Unpacking python3.14 (3.14.10-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../10-libpython3-stdlib_3.14.8-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.14.8-1) ... Setting up python3-minimal (3.14.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5869 files and directories currently installed.) Preparing to unpack .../00-python3_3.14.8-1_amd64.deb ... Unpacking python3 (3.14.8-1) ... Selecting previously unselected package python3-numpy-dev:amd64. Preparing to unpack .../01-python3-numpy-dev_1%3a2.4.6+ds-5+b1_amd64.deb ... Unpacking python3-numpy-dev:amd64 (1:2.4.6+ds-5+b1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../02-libblas3_3.12.1-8_amd64.deb ... Unpacking libblas3:amd64 (3.12.1-8) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../03-libgfortran5_16.2.0-4_amd64.deb ... Unpacking libgfortran5:amd64 (16.2.0-4) ... Selecting previously unselected package libopenblas0-pthread:amd64. Preparing to unpack .../04-libopenblas0-pthread_0.3.34+ds-2_amd64.deb ... Unpacking libopenblas0-pthread:amd64 (0.3.34+ds-2) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../05-liblapack3_3.12.1-8_amd64.deb ... Unpacking liblapack3:amd64 (3.12.1-8) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../06-python3-numpy_1%3a2.4.6+ds-5+b1_amd64.deb ... Unpacking python3-numpy (1:2.4.6+ds-5+b1) ... Selecting previously unselected package openssl. Preparing to unpack .../07-openssl_3.6.5-1_amd64.deb ... Unpacking openssl (3.6.5-1) ... Selecting previously unselected package ca-certificates. 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Unpacking python3-setproctitle:amd64 (1.3.8-1+b1) ... Selecting previously unselected package python3-sortedcontainers. Preparing to unpack .../78-python3-sortedcontainers_2.4.0-3_all.deb ... Unpacking python3-sortedcontainers (2.4.0-3) ... Selecting previously unselected package python3-tblib. Preparing to unpack .../79-python3-tblib_3.2.2-1_all.deb ... Unpacking python3-tblib (3.2.2-1) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../80-python3-typeguard_4.6.0-1_all.deb ... Unpacking python3-typeguard (4.6.0-1) ... Selecting previously unselected package python3-zmq. Preparing to unpack .../81-python3-zmq_27.1.0-1+b3_amd64.deb ... Unpacking python3-zmq (27.1.0-1+b3) ... Selecting previously unselected package python3-parsl. Preparing to unpack .../82-python3-parsl_2026.08.10+ds-1_all.deb ... Unpacking python3-parsl (2026.08.10+ds-1) ... Selecting previously unselected package python3-patsy. 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Unpacking python3-skbio (0.7.4-2+b1) ... Selecting previously unselected package python3-tomlkit. Preparing to unpack .../89-python3-tomlkit_0.13.3-3_all.deb ... Unpacking python3-tomlkit (0.13.3-3) ... Selecting previously unselected package python3-tzlocal. Preparing to unpack .../90-python3-tzlocal_5.4.5-1_all.deb ... Unpacking python3-tzlocal (5.4.5-1) ... Selecting previously unselected package python3-yaml. Preparing to unpack .../91-python3-yaml_6.0.3-1+b2_amd64.deb ... Unpacking python3-yaml (6.0.3-1+b2) ... Selecting previously unselected package qiime. Preparing to unpack .../92-qiime_2024.5.0-1_all.deb ... Unpacking qiime (2024.5.0-1) ... Selecting previously unselected package q2-types. Preparing to unpack .../93-q2-types_2024.5.0-1_all.deb ... Unpacking q2-types (2024.5.0-1) ... Setting up media-types (14.0.0) ... Setting up javascript-common (12+nmu1) ... Setting up libnorm1t64:amd64 (1.5.9+dfsg-4+b1) ... Setting up libkeyutils1:amd64 (1.6.3-6+b2) ... Setting up libgpg-error0:amd64 (1.61-5) ... Setting up libjs-popper.js (1.16.1+ds-7) ... Setting up libyaml-0-2:amd64 (0.2.5-2+b1) ... Setting up libxml2-16:amd64 (2.15.4+dfsg-1+b1) ... Setting up libsqlite3-0:amd64 (3.54.1-2) ... Setting up libyajl2:amd64 (2.1.0-7) ... Setting up libgcrypt20:amd64 (1.12.4-2) ... Setting up libqhull-r8.0:amd64 (2020.2-9) ... Setting up libcom-err2:amd64 (1.47.4-1+b3) ... Setting up node-fortawesome-fontawesome-free (7.3.1+ds1-1) ... Setting up libgomp1:amd64 (16.2.0-4) ... Setting up libkrb5support0:amd64 (1.22.1-3) ... Setting up libpgm-5.3-0t64:amd64 (5.3.128~dfsg-3) ... Setting up libblas3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up liblzf1:amd64 (3.6-4+b4) ... Setting up python3-numpy-dev:amd64 (1:2.4.6+ds-5+b1) ... Setting up libncursesw6:amd64 (6.6+20260608-2) ... Setting up libk5crypto3:amd64 (1.22.1-3) ... Setting up libgfortran5:amd64 (16.2.0-4) ... Setting up libffi8:amd64 (3.8.0-2) ... Setting up libxslt1.1:amd64 (1.1.45-0.1) ... Setting up netbase (6.6) ... Setting up libkrb5-3:amd64 (1.22.1-3) ... Setting up libjs-bootstrap4 (4.6.2+dfsg-3) ... Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... Setting up openssl (3.6.5-1) ... Setting up libsodium26:amd64 (1.0.22-2) ... Setting up readline-common (8.3-4) ... Setting up libsz2:amd64 (1.1.8-1) ... Setting up liblapack3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libopenblas0-pthread:amd64 (0.3.34+ds-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up ca-certificates (20260816+nmu1) ... Updating certificates in /etc/ssl/certs... 120 added, 0 removed; done. Setting up libgssapi-krb5-2:amd64 (1.22.1-3) ... Setting up libreadline8t64:amd64 (8.3-4) ... Setting up libopenblas0:amd64 (0.3.34+ds-2) ... Setting up libhdf5-320:amd64 (2.2.0+repack-6) ... Setting up libzmq5:amd64 (4.3.5-1+b8) ... Setting up libpython3.14-stdlib:amd64 (3.14.10-1) ... Setting up libhdf5-hl-320:amd64 (2.2.0+repack-6) ... Setting up python3.14 (3.14.10-1) ... Setting up libpython3-stdlib:amd64 (3.14.8-1) ... Setting up python3 (3.14.8-1) ... Setting up python3-sortedcontainers (2.4.0-3) ... Setting up python3-click (8.3.3-3) ... Setting up python3-networkx (3.4.2-7) ... Setting up python3-markupsafe (3.0.3-2+b2) ... Setting up python3-platformdirs (4.14.5-1) ... Setting up python3-psutil (7.2.2-3) ... Setting up python3-decorator (5.3.1-1) ... Setting up python3-jinja2 (3.1.6-4) ... Setting up python3-packaging (26.3-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-pyparsing (3.3.3-2) ... Setting up python3-certifi (2026.10.23+ds-1) ... Setting up python3-werkzeug (3.1.9-1) ... Setting up python3-dill (0.4.1-2) ... Setting up python3-greenlet (3.3.2-5) ... Setting up python3-setproctitle:amd64 (1.3.8-1+b1) ... Setting up python3-idna (3.20-1) ... Setting up python3-typing-extensions (4.16.0-5) ... Setting up python3-numpy (1:2.4.6+ds-5+b1) ... Setting up python3-urllib3 (2.8.0-2) ... Setting up python3-hdmedians (0.14.2-6+b4) ... Setting up python3-lxml:amd64 (6.1.3-1.1) ... Setting up python3-dateutil (4.0.0-1) ... Setting up python3-bibtexparser (2.0.0b5+really1.4.4-1) ... Setting up python3-tzlocal (5.4.5-1) ... Setting up python3-tomlkit (0.13.3-3) ... Setting up python3-statsmodels-lib:amd64 (0.15.0+dfsg-2) ... Setting up python3-cffi-backend:amd64 (2.1.1-2) ... Setting up python3-blinker (1.9.0-2) ... Setting up python3-filelock (4.2.8-1) ... Setting up python3-scipy (1.17.1-5+b2) ... Setting up python3-setuptools (84.2.0-1) ... Setting up python3-tblib (3.2.2-1) ... Setting up python3-ijson (3.6.0-1) ... Setting up python3-public (7.0.0-1) ... Setting up python3-charset-normalizer (3.4.7-2+b3) ... Setting up python3-pandas-lib:amd64 (2.3.3+dfsg-6) ... Setting up python3-typeguard (4.6.0-1) ... Setting up python3-array-api-compat (1.11.2-1) ... Setting up python3-h5py-serial (3.16.0-8) ... Setting up python3-itsdangerous (2.2.0-4) ... Setting up python3-yaml (6.0.3-1+b2) ... Setting up python3-pytz (2026.6-1) ... Setting up python3-sqlalchemy (2.0.52+ds1-1) ... Setting up python3-flufl.lock (9.1.0-1) ... Setting up python3-patsy (1.0.3-1) ... Setting up python3-pandas (2.3.3+dfsg-6) ... Setting up python3-zmq (27.1.0-1+b3) ... Setting up python3-requests (2.34.2-1) ... Setting up python3-h5py (3.16.0-8) ... Setting up python3-statsmodels (0.15.0+dfsg-2) ... Setting up python3-flask (3.1.3-4) ... Setting up python3-biom-format (2.1.18-1+b1) ... Setting up python3-skbio (0.7.4-2+b1) ... Setting up python3-flask-sqlalchemy (3.1.1-5) ... Setting up python3-parsl (2026.08.10+ds-1) ... Setting up qiime (2024.5.0-1) ... Setting up q2-types (2024.5.0-1) ... Processing triggers for libc-bin (2.43-7) ... Processing triggers for ca-certificates (20260816+nmu1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m48.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-y', 'install', 'q2-types'] 0m48.9s INFO: Running scripts post_install 0m48.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_install_exceptions'] 0m48.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_install_exceptions'] 0m48.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 0m50.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 0m50.4s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpsbj_e5p3 to experimental 0m50.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main deb http://deb.debian.org/debian/ experimental main 0m50.4s INFO: Running scripts pre_distupgrade 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_exceptions'] 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_exceptions'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m50.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m50.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', 'update'] 0m51.5s DUMP: Hit:1 http://deb.debian.org/debian sid InRelease Get:2 http://deb.debian.org/debian experimental InRelease [91.7 kB] Get:3 http://deb.debian.org/debian experimental/main amd64 Packages [341 kB] Get:4 http://deb.debian.org/debian experimental/main Translation-en [214 kB] Fetched 647 kB in 0s (3774 kB/s) Reading package lists... 0m51.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', 'update'] 0m51.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-yf', 'dist-upgrade'] 0m52.4s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m52.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-yf', 'dist-upgrade'] 0m52.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m53.4s DUMP: 2498790543e5552b3d74ace60f739f1e - 0m53.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m53.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'show', '--no-all-versions', 'q2-types'] 0m53.7s DUMP: Package: q2-types Version: 2024.5.0-1 Installed-Size: 50878 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3:any, python3-setuptools, python3-skbio, python3-numpy, python3-pandas, python3-biom-format, python3-ijson, python3-h5py, libopenblas0, qiime (>= 2024.5) Description-en: QIIME 2 plugin defining types for microbiome analysis QIIME 2 is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results. Key features: * Integrated and automatic tracking of data provenance * Semantic type system * Plugin system for extending microbiome analysis functionality * Support for multiple types of user interfaces (e.g. API, command line, graphical) . QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis pipeline. QIIME 2 will address many of the limitations of QIIME 1, while retaining the features that makes QIIME 1 a powerful and widely-used analysis pipeline. . QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline. New functionality will regularly become available through QIIME 2 plugins. You can view a list of plugins that are currently available on the QIIME 2 plugin availability page. The future plugins page lists plugins that are being developed. Description-md5: 598b2941d3b1cd43d3c10ff16a71fbef Homepage: https://qiime2.org/ Section: science Priority: optional Filename: pool/main/q/q2-types/q2-types_2024.5.0-1_all.deb Size: 5531308 MD5sum: 6dc2a0f27bc7db26a8a908546973c8c8 SHA256: 951ae37ee10d2aa31c826c968cffa88b4c64447c643266b49d0dd7f19575c085 0m53.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'show', '--no-all-versions', 'q2-types'] 0m53.7s INFO: apt-cache knows about the following packages: q2-types 0m53.7s INFO: Running scripts pre_install 0m53.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_database-server'] 0m53.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_database-server'] 0m53.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_exceptions'] 0m53.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_exceptions'] 0m53.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_extras'] 0m53.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_extras'] 0m53.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture'] 0m53.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture'] 0m53.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m53.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m53.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy'] 0m53.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 1 http://deb.debian.org/debian experimental/main amd64 Packages release o=Debian,a=experimental,n=rc-buggy,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m53.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy'] 0m53.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy', 'q2-types'] 0m53.8s DUMP: q2-types: Installed: 2024.5.0-1 Candidate: 2024.5.0-1 Version table: 2026.10.0+dfsg-1 1 1 http://deb.debian.org/debian experimental/main amd64 Packages 2026.10.0-1 1 1 http://deb.debian.org/debian experimental/main amd64 Packages *** 2024.5.0-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m53.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy', 'q2-types'] 0m53.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-y', '-t', 'experimental', 'install', 'q2-types'] 0m56.4s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: qiime rachis Recommended packages: q2-cutadapt q2-demux q2-feature-classifier q2-feature-table q2-metadata q2-quality-filter q2cli q2templates The following NEW packages will be installed: rachis The following packages will be upgraded: q2-types qiime 2 upgraded, 1 newly installed, 0 to remove and 9 not upgraded. Need to get 1363 kB of archives. After this operation, 43.7 MB disk space will be freed. Get:1 http://deb.debian.org/debian experimental/main amd64 qiime all 2026.10.0-1 [8868 B] Get:2 http://deb.debian.org/debian experimental/main amd64 rachis all 2026.10.0-1 [390 kB] Get:3 http://deb.debian.org/debian experimental/main amd64 q2-types all 2026.10.0+dfsg-1 [965 kB] Fetched 1363 kB in 0s (7419 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 26613 files and directories currently installed.) Preparing to unpack .../qiime_2026.10.0-1_all.deb ... Unpacking qiime (2026.10.0-1) over (2024.5.0-1) ... Selecting previously unselected package rachis. Preparing to unpack .../rachis_2026.10.0-1_all.deb ... Unpacking rachis (2026.10.0-1) ... Preparing to unpack .../q2-types_2026.10.0+dfsg-1_all.deb ... Unpacking q2-types (2026.10.0+dfsg-1) over (2024.5.0-1) ... Setting up rachis (2026.10.0-1) ... Setting up qiime (2026.10.0-1) ... Setting up q2-types (2026.10.0+dfsg-1) ... 0m56.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-y', '-t', 'experimental', 'install', 'q2-types'] 0m56.4s INFO: Running scripts post_install 0m56.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_install_exceptions'] 0m56.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_install_exceptions'] 0m56.4s INFO: Running scripts post_distupgrade 0m56.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m56.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m56.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_exceptions'] 0m56.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_exceptions'] 0m56.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m56.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m56.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m56.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m56.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_zz_backports'] 0m56.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_distupgrade_zz_backports'] 0m56.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 0m57.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 0m57.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 0m59.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 0m59.5s INFO: Running scripts pre_install 0m59.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_database-server'] 0m59.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_database-server'] 0m59.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_exceptions'] 0m59.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_exceptions'] 0m59.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_extras'] 0m59.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_extras'] 0m59.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture'] 0m59.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture'] 0m59.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m59.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m59.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy'] 0m59.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 1 http://deb.debian.org/debian experimental/main amd64 Packages release o=Debian,a=experimental,n=rc-buggy,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m59.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy'] 0m59.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy', 'q2-types'] 0m59.7s DUMP: q2-types: Installed: 2026.10.0+dfsg-1 Candidate: 2026.10.0+dfsg-1 Version table: *** 2026.10.0+dfsg-1 100 1 http://deb.debian.org/debian experimental/main amd64 Packages 100 /var/lib/dpkg/status 2026.10.0-1 1 1 http://deb.debian.org/debian experimental/main amd64 Packages 2024.5.0-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m59.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-cache', 'policy', 'q2-types'] 0m59.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-y', '-t', 'experimental', 'install', 'q2-types=2026.10.0+dfsg-1'] 1m0.6s DUMP: Reading package lists... Building dependency tree... Reading state information... q2-types is already the newest version (2026.10.0+dfsg-1). Solving dependencies... 0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded. 1m0.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', '-y', '-t', 'experimental', 'install', 'q2-types=2026.10.0+dfsg-1'] 1m0.6s INFO: Running scripts post_install 1m0.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_install_exceptions'] 1m0.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_install_exceptions'] 1m0.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 1m2.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 1m4.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', '-ac', '--ignore-obsolete'] 1m8.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', '-ac', '--ignore-obsolete'] 1m8.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m8.2s DUMP: 0.17.5+b5 1m8.2s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m8.2s INFO: Running adequate version 0.17.5+b5 now. 1m8.2s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'q2-types'] 1m8.2s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'q2-types'] 1m8.2s INFO: Running scripts pre_remove 1m8.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m10.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m10.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m10.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m10.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_exceptions'] 1m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/pre_remove_exceptions'] 1m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m10.4s DUMP: install ok installed apt apt 3.3.7 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4+b1 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed ca-certificates ca-certificates 20260816+nmu1 install ok installed coreutils coreutils 9.12-0.3 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.12 install ok installed findutils findutils 4.11.0-3 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-4 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed javascript-common javascript-common 12+nmu1 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.7 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.2.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.2.1-1+b1 install ok installed libblas3:amd64 libblas3 3.12.1-8 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-7 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-7 install ok installed libc6:amd64 libc6 2.43-7 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1+b1 install ok installed libcap2:amd64 libcap2 1:2.78-1+b2 install ok installed libcom-err2:amd64 libcom-err2 1.47.4-1+b3 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-12 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libexpat1:amd64 libexpat1 2.10.0-1 install ok installed libffi8:amd64 libffi8 3.8.0-2 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-4 install ok installed libgcrypt20:amd64 libgcrypt20 1.12.4-2 install ok installed libgfortran5:amd64 libgfortran5 16.2.0-4 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libgomp1:amd64 libgomp1 16.2.0-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.61-5 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.22.1-3 install ok installed libhdf5-320:amd64 libhdf5-320 2.2.0+repack-6 install ok installed libhdf5-hl-320:amd64 libhdf5-hl-320 2.2.0+repack-6 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed libjs-bootstrap4 libjs-bootstrap4 4.6.2+dfsg-3 install ok installed libjs-jquery libjs-jquery 3.7.1+dfsg+~3.5.33-1 install ok installed libjs-popper.js libjs-popper.js 1.16.1+ds-7 install ok installed libk5crypto3:amd64 libk5crypto3 1.22.1-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-6+b2 install ok installed libkrb5-3:amd64 libkrb5-3 1.22.1-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.22.1-3 install ok installed liblapack3:amd64 liblapack3 3.12.1-8 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzf1:amd64 liblzf1 3.6-4+b4 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libncursesw6:amd64 libncursesw6 6.6+20260608-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libnorm1t64:amd64 libnorm1t64 1.5.9+dfsg-4+b1 install ok installed libopenblas0:amd64 libopenblas0 0.3.34+ds-2 install ok installed libopenblas0-pthread:amd64 libopenblas0-pthread 0.3.34+ds-2 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.49-1 install ok installed libpgm-5.3-0t64:amd64 libpgm-5.3-0t64 5.3.128~dfsg-3 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.14.8-1 install ok installed libpython3.14-minimal:amd64 libpython3.14-minimal 3.14.10-1 install ok installed libpython3.14-stdlib:amd64 libpython3.14-stdlib 3.14.10-1 install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-9 install ok installed libreadline8t64:amd64 libreadline8t64 8.3-4 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b2 install ok installed libselinux1:amd64 libselinux1 3.11-2.1+b1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b2 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libsodium26:amd64 libsodium26 1.0.22-2 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.54.1-2 install ok installed libssl3t64:amd64 libssl3t64 3.6.5-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-4 install ok installed libsystemd0:amd64 libsystemd0 262.2-1 install ok installed libsz2:amd64 libsz2 1.1.8-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 262.2-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libxml2-16:amd64 libxml2-16 2.15.4+dfsg-1+b1 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.45-0.1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libyajl2:amd64 libyajl2 2.1.0-7 install ok installed libyaml-0-2:amd64 libyaml-0-2 0.2.5-2+b1 install ok installed libzmq5:amd64 libzmq5 4.3.5-1+b8 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.3-1 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed media-types media-types 14.0.0 install ok installed mount mount 2.42.4-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed netbase netbase 6.6 install ok installed node-fortawesome-fontawesome-free node-fortawesome-fontawesome-free 7.3.1+ds1-1 install ok installed openssl openssl 3.6.5-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.5-1 install ok installed passwd passwd 1:4.20.3-1 install ok installed perl-base perl-base 5.44.0-3 install ok installed python3 python3 3.14.8-1 install ok installed python3-array-api-compat python3-array-api-compat 1.11.2-1 install ok installed python3-bibtexparser python3-bibtexparser 2.0.0b5+really1.4.4-1 install ok installed python3-biom-format python3-biom-format 2.1.18-1+b1 install ok installed python3-blinker python3-blinker 1.9.0-2 install ok installed python3-certifi python3-certifi 2026.10.23+ds-1 install ok installed python3-cffi-backend:amd64 python3-cffi-backend 2.1.1-2 install ok installed python3-chardet python3-chardet 5.2.0+dfsg-2 install ok installed python3-charset-normalizer python3-charset-normalizer 3.4.7-2+b3 install ok installed python3-click python3-click 8.3.3-3 install ok installed python3-dateutil python3-dateutil 4.0.0-1 install ok installed python3-decorator python3-decorator 5.3.1-1 install ok installed python3-dill python3-dill 0.4.1-2 install ok installed python3-filelock python3-filelock 4.2.8-1 install ok installed python3-flask python3-flask 3.1.3-4 install ok installed python3-flask-sqlalchemy python3-flask-sqlalchemy 3.1.1-5 install ok installed python3-flufl.lock python3-flufl.lock 9.1.0-1 install ok installed python3-greenlet python3-greenlet 3.3.2-5 install ok installed python3-h5py python3-h5py 3.16.0-8 install ok installed python3-h5py-serial python3-h5py-serial 3.16.0-8 install ok installed python3-hdmedians python3-hdmedians 0.14.2-6+b4 install ok installed python3-idna python3-idna 3.20-1 install ok installed python3-ijson python3-ijson 3.6.0-1 install ok installed python3-itsdangerous python3-itsdangerous 2.2.0-4 install ok installed python3-jinja2 python3-jinja2 3.1.6-4 install ok installed python3-lxml:amd64 python3-lxml 6.1.3-1.1 install ok installed python3-markupsafe python3-markupsafe 3.0.3-2+b2 install ok installed python3-minimal python3-minimal 3.14.8-1 install ok installed python3-networkx python3-networkx 3.4.2-7 install ok installed python3-numpy python3-numpy 1:2.4.6+ds-5+b1 install ok installed python3-numpy-dev:amd64 python3-numpy-dev 1:2.4.6+ds-5+b1 install ok installed python3-packaging python3-packaging 26.3-1 install ok installed python3-pandas python3-pandas 2.3.3+dfsg-6 install ok installed python3-pandas-lib:amd64 python3-pandas-lib 2.3.3+dfsg-6 install ok installed python3-parsl python3-parsl 2026.08.10+ds-1 install ok installed python3-patsy python3-patsy 1.0.3-1 install ok installed python3-platformdirs python3-platformdirs 4.14.5-1 install ok installed python3-psutil python3-psutil 7.2.2-3 install ok installed python3-public python3-public 7.0.0-1 install ok installed python3-pyparsing python3-pyparsing 3.3.3-2 install ok installed python3-pytz python3-pytz 2026.6-1 install ok installed python3-requests python3-requests 2.34.2-1 install ok installed python3-scipy python3-scipy 1.17.1-5+b2 install ok installed python3-setproctitle:amd64 python3-setproctitle 1.3.8-1+b1 install ok installed python3-setuptools python3-setuptools 84.2.0-1 install ok installed python3-skbio python3-skbio 0.7.4-2+b1 install ok installed python3-sortedcontainers python3-sortedcontainers 2.4.0-3 install ok installed python3-sqlalchemy python3-sqlalchemy 2.0.52+ds1-1 install ok installed python3-statsmodels python3-statsmodels 0.15.0+dfsg-2 install ok installed python3-statsmodels-lib:amd64 python3-statsmodels-lib 0.15.0+dfsg-2 install ok installed python3-tblib python3-tblib 3.2.2-1 install ok installed python3-tomlkit python3-tomlkit 0.13.3-3 install ok installed python3-typeguard python3-typeguard 4.6.0-1 install ok installed python3-typing-extensions python3-typing-extensions 4.16.0-5 install ok installed python3-tzlocal python3-tzlocal 5.4.5-1 install ok installed python3-urllib3 python3-urllib3 2.8.0-2 install ok installed python3-werkzeug python3-werkzeug 3.1.9-1 install ok installed python3-yaml python3-yaml 6.0.3-1+b2 install ok installed python3-zmq python3-zmq 27.1.0-1+b3 install ok installed python3.14 python3.14 3.14.10-1 install ok installed python3.14-minimal python3.14-minimal 3.14.10-1 install ok installed q2-types q2-types 2026.10.0+dfsg-1 install ok installed qiime qiime 2026.10.0-1 install ok installed rachis rachis 2026.10.0-1 install ok installed readline-common readline-common 8.3-4 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-2 install ok installed tar tar 1.35+dfsg-7 install ok installed tzdata tzdata 2026f-1 install ok installed util-linux util-linux 2.42.4-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-4 1m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', 'remove', '--allow-remove-essential', 'ca-certificates', 'javascript-common', 'libblas3:amd64', 'libcom-err2:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgcrypt20:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-320:amd64', 'libhdf5-hl-320:amd64', 'libjs-bootstrap4', 'libjs-jquery', 'libjs-popper.js', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblzf1:amd64', 'libncursesw6:amd64', 'libnorm1t64:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpgm-5.3-0t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'libsodium26:amd64', 'libsqlite3-0:amd64', 'libsz2:amd64', 'libxml2-16:amd64', 'libxslt1.1:amd64', 'libyajl2:amd64', 'libyaml-0-2:amd64', 'libzmq5:amd64', 'media-types', 'netbase', 'node-fortawesome-fontawesome-free', 'openssl', 'python3', 'python3-array-api-compat', 'python3-bibtexparser', 'python3-biom-format', 'python3-blinker', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-click', 'python3-dateutil', 'python3-decorator', 'python3-dill', 'python3-filelock', 'python3-flask', 'python3-flask-sqlalchemy', 'python3-flufl.lock', 'python3-greenlet', 'python3-h5py', 'python3-h5py-serial', 'python3-hdmedians', 'python3-idna', 'python3-ijson', 'python3-itsdangerous', 'python3-jinja2', 'python3-lxml:amd64', 'python3-markupsafe', 'python3-minimal', 'python3-networkx', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-parsl', 'python3-patsy', 'python3-platformdirs', 'python3-psutil', 'python3-public', 'python3-pyparsing', 'python3-pytz', 'python3-requests', 'python3-scipy', 'python3-setproctitle:amd64', 'python3-setuptools', 'python3-skbio', 'python3-sortedcontainers', 'python3-sqlalchemy', 'python3-statsmodels', 'python3-statsmodels-lib:amd64', 'python3-tblib', 'python3-tomlkit', 'python3-typeguard', 'python3-typing-extensions', 'python3-tzlocal', 'python3-urllib3', 'python3-werkzeug', 'python3-yaml', 'python3-zmq', 'python3.14', 'python3.14-minimal', 'qiime', 'rachis', 'readline-common', 'q2-types'] 1m19.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: ca-certificates javascript-common libblas3 libcom-err2 libexpat1 libffi8 libgcrypt20 libgfortran5 libgomp1 libgpg-error0 libgssapi-krb5-2 libhdf5-320 libhdf5-hl-320 libjs-bootstrap4 libjs-jquery libjs-popper.js libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblzf1 libncursesw6 libnorm1t64 libopenblas0 libopenblas0-pthread libpgm-5.3-0t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libqhull-r8.0 libreadline8t64 libsodium26 libsqlite3-0 libsz2 libxml2-16 libxslt1.1 libyajl2 libyaml-0-2 libzmq5 media-types netbase node-fortawesome-fontawesome-free openssl python3 python3-array-api-compat python3-bibtexparser python3-biom-format python3-blinker python3-certifi python3-cffi-backend python3-chardet python3-charset-normalizer python3-click python3-dateutil python3-decorator python3-dill python3-filelock python3-flask python3-flask-sqlalchemy python3-flufl.lock python3-greenlet python3-h5py python3-h5py-serial python3-hdmedians python3-idna python3-ijson python3-itsdangerous python3-jinja2 python3-lxml python3-markupsafe python3-minimal python3-networkx python3-numpy python3-numpy-dev python3-packaging python3-pandas python3-pandas-lib python3-parsl python3-patsy python3-platformdirs python3-psutil python3-public python3-pyparsing python3-pytz python3-requests python3-scipy python3-setproctitle python3-setuptools python3-skbio python3-sortedcontainers python3-sqlalchemy python3-statsmodels python3-statsmodels-lib python3-tblib python3-tomlkit python3-typeguard python3-typing-extensions python3-tzlocal python3-urllib3 python3-werkzeug python3-yaml python3-zmq python3.14 python3.14-minimal q2-types qiime rachis readline-common 0 upgraded, 0 newly installed, 109 to remove and 0 not upgraded. After this operation, 610 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 26926 files and directories currently installed.) Removing q2-types (2026.10.0+dfsg-1) ... Removing python3-skbio (0.7.4-2+b1) ... Removing qiime (2026.10.0-1) ... Removing rachis (2026.10.0-1) ... Removing python3-parsl (2026.08.10+ds-1) ... Removing python3-requests (2.34.2-1) ... Removing python3-certifi (2026.10.23+ds-1) ... Removing ca-certificates (20260816+nmu1) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libjs-bootstrap4 (4.6.2+dfsg-3) ... Removing libjs-popper.js (1.16.1+ds-7) ... Removing javascript-common (12+nmu1) ... Removing python3-statsmodels (0.15.0+dfsg-2) ... Removing python3-biom-format (2.1.18-1+b1) ... Removing python3-scipy (1.17.1-5+b2) ... Removing python3-pandas (2.3.3+dfsg-6) ... Removing python3-patsy (1.0.3-1) ... Removing python3-pandas-lib:amd64 (2.3.3+dfsg-6) ... Removing python3-statsmodels-lib:amd64 (0.15.0+dfsg-2) ... Removing python3-hdmedians (0.14.2-6+b4) ... Removing liblapack3:amd64 (3.12.1-8) ... Removing libblas3:amd64 (3.12.1-8) ... Removing python3-zmq (27.1.0-1+b3) ... Removing libzmq5:amd64 (4.3.5-1+b8) ... Removing libgssapi-krb5-2:amd64 (1.22.1-3) ... Removing libkrb5-3:amd64 (1.22.1-3) ... Removing libcom-err2:amd64 (1.47.4-1+b3) ... Removing python3-lxml:amd64 (6.1.3-1.1) ... Removing python3-flask-sqlalchemy (3.1.1-5) ... Removing python3-sqlalchemy (2.0.52+ds1-1) ... Removing python3-yaml (6.0.3-1+b2) ... Removing python3-sortedcontainers (2.4.0-3) ... Removing python3-cffi-backend:amd64 (2.1.1-2) ... Removing libxslt1.1:amd64 (1.1.45-0.1) ... Removing libgcrypt20:amd64 (1.12.4-2) ... Removing libopenblas0:amd64 (0.3.34+ds-2) ... Removing libgomp1:amd64 (16.2.0-4) ... Removing libgpg-error0:amd64 (1.61-5) ... Removing python3-h5py (3.16.0-8) ... Removing python3-h5py-serial (3.16.0-8) ... Removing libhdf5-hl-320:amd64 (2.2.0+repack-6) ... Removing libhdf5-320:amd64 (2.2.0+repack-6) ... Removing libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... Removing libk5crypto3:amd64 (1.22.1-3) ... Removing libkeyutils1:amd64 (1.6.3-6+b2) ... Removing libkrb5support0:amd64 (1.22.1-3) ... Removing liblzf1:amd64 (3.6-4+b4) ... Removing libnorm1t64:amd64 (1.5.9+dfsg-4+b1) ... Removing libpgm-5.3-0t64:amd64 (5.3.128~dfsg-3) ... Removing libqhull-r8.0:amd64 (2020.2-9) ... Removing libsodium26:amd64 (1.0.22-2) ... Removing libsz2:amd64 (1.1.8-1) ... Removing libxml2-16:amd64 (2.15.4+dfsg-1+b1) ... Removing python3-ijson (3.6.0-1) ... Removing libyajl2:amd64 (2.1.0-7) ... Removing libyaml-0-2:amd64 (0.2.5-2+b1) ... Removing node-fortawesome-fontawesome-free (7.3.1+ds1-1) ... Removing openssl (3.6.5-1) ... Removing python3-array-api-compat (1.11.2-1) ... Removing python3-bibtexparser (2.0.0b5+really1.4.4-1) ... Removing python3-flask (3.1.3-4) ... Removing python3-blinker (1.9.0-2) ... Removing python3-chardet (5.2.0+dfsg-2) ... Removing python3-charset-normalizer (3.4.7-2+b3) ... Removing python3-click (8.3.3-3) ... Removing python3-dateutil (4.0.0-1) ... Removing python3-decorator (5.3.1-1) ... Removing python3-dill (0.4.1-2) ... Removing python3-filelock (4.2.8-1) ... Removing python3-flufl.lock (9.1.0-1) ... Removing python3-greenlet (3.3.2-5) ... Removing python3-idna (3.20-1) ... Removing python3-itsdangerous (2.2.0-4) ... Removing python3-jinja2 (3.1.6-4) ... Removing python3-werkzeug (3.1.9-1) ... Removing python3-markupsafe (3.0.3-2+b2) ... Removing python3-networkx (3.4.2-7) ... Removing python3-packaging (26.3-1) ... Removing python3-platformdirs (4.14.5-1) ... Removing python3-psutil (7.2.2-3) ... Removing python3-public (7.0.0-1) ... Removing python3-pyparsing (3.3.3-2) ... Removing python3-pytz (2026.6-1) ... Removing python3-setproctitle:amd64 (1.3.8-1+b1) ... Removing python3-setuptools (84.2.0-1) ... Removing python3-tblib (3.2.2-1) ... Removing python3-tomlkit (0.13.3-3) ... Removing python3-typeguard (4.6.0-1) ... Removing python3-typing-extensions (4.16.0-5) ... Removing python3-tzlocal (5.4.5-1) ... Removing python3-urllib3 (2.8.0-2) ... Removing python3-numpy (1:2.4.6+ds-5+b1) ... Removing python3 (3.14.8-1) ... Removing python3.14 (3.14.10-1) ... Removing python3-minimal (3.14.8-1) ... Removing python3.14-minimal (3.14.10-1) ... Removing libexpat1:amd64 (2.10.0-1) ... Removing libpython3-stdlib:amd64 (3.14.8-1) ... Removing libpython3.14-stdlib:amd64 (3.14.10-1) ... find: '/usr/lib/python3': No such file or directory Removing libffi8:amd64 (3.8.0-2) ... Removing libopenblas0-pthread:amd64 (0.3.34+ds-2) ... Removing libgfortran5:amd64 (16.2.0-4) ... Removing libncursesw6:amd64 (6.6+20260608-2) ... Removing libpython3.14-minimal:amd64 (3.14.10-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.3-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsqlite3-0:amd64 (3.54.1-2) ... Removing media-types (14.0.0) ... Removing netbase (6.6) ... Removing python3-numpy-dev:amd64 (1:2.4.6+ds-5+b1) ... Removing readline-common (8.3-4) ... Processing triggers for libc-bin (2.43-7) ... 1m19.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', 'remove', '--allow-remove-essential', 'ca-certificates', 'javascript-common', 'libblas3:amd64', 'libcom-err2:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgcrypt20:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-320:amd64', 'libhdf5-hl-320:amd64', 'libjs-bootstrap4', 'libjs-jquery', 'libjs-popper.js', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblzf1:amd64', 'libncursesw6:amd64', 'libnorm1t64:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpgm-5.3-0t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'libsodium26:amd64', 'libsqlite3-0:amd64', 'libsz2:amd64', 'libxml2-16:amd64', 'libxslt1.1:amd64', 'libyajl2:amd64', 'libyaml-0-2:amd64', 'libzmq5:amd64', 'media-types', 'netbase', 'node-fortawesome-fontawesome-free', 'openssl', 'python3', 'python3-array-api-compat', 'python3-bibtexparser', 'python3-biom-format', 'python3-blinker', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-click', 'python3-dateutil', 'python3-decorator', 'python3-dill', 'python3-filelock', 'python3-flask', 'python3-flask-sqlalchemy', 'python3-flufl.lock', 'python3-greenlet', 'python3-h5py', 'python3-h5py-serial', 'python3-hdmedians', 'python3-idna', 'python3-ijson', 'python3-itsdangerous', 'python3-jinja2', 'python3-lxml:amd64', 'python3-markupsafe', 'python3-minimal', 'python3-networkx', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-parsl', 'python3-patsy', 'python3-platformdirs', 'python3-psutil', 'python3-public', 'python3-pyparsing', 'python3-pytz', 'python3-requests', 'python3-scipy', 'python3-setproctitle:amd64', 'python3-setuptools', 'python3-skbio', 'python3-sortedcontainers', 'python3-sqlalchemy', 'python3-statsmodels', 'python3-statsmodels-lib:amd64', 'python3-tblib', 'python3-tomlkit', 'python3-typeguard', 'python3-typing-extensions', 'python3-tzlocal', 'python3-urllib3', 'python3-werkzeug', 'python3-yaml', 'python3-zmq', 'python3.14', 'python3.14-minimal', 'qiime', 'rachis', 'readline-common', 'q2-types'] 1m19.8s INFO: Running scripts post_remove 1m19.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_remove_exceptions'] 1m19.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_remove_exceptions'] 1m19.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg', '--purge', 'ca-certificates', 'javascript-common', 'libblas3:amd64', 'libcom-err2:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgcrypt20:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-320:amd64', 'libhdf5-hl-320:amd64', 'libjs-bootstrap4', 'libjs-jquery', 'libjs-popper.js', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblzf1:amd64', 'libncursesw6:amd64', 'libnorm1t64:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpgm-5.3-0t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'libsodium26:amd64', 'libsqlite3-0:amd64', 'libsz2:amd64', 'libxml2-16:amd64', 'libxslt1.1:amd64', 'libyajl2:amd64', 'libyaml-0-2:amd64', 'libzmq5:amd64', 'media-types', 'netbase', 'node-fortawesome-fontawesome-free', 'openssl', 'python3', 'python3-array-api-compat', 'python3-bibtexparser', 'python3-biom-format', 'python3-blinker', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-click', 'python3-dateutil', 'python3-decorator', 'python3-dill', 'python3-filelock', 'python3-flask', 'python3-flask-sqlalchemy', 'python3-flufl.lock', 'python3-greenlet', 'python3-h5py', 'python3-h5py-serial', 'python3-hdmedians', 'python3-idna', 'python3-ijson', 'python3-itsdangerous', 'python3-jinja2', 'python3-lxml:amd64', 'python3-markupsafe', 'python3-minimal', 'python3-networkx', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-parsl', 'python3-patsy', 'python3-platformdirs', 'python3-psutil', 'python3-public', 'python3-pyparsing', 'python3-pytz', 'python3-requests', 'python3-scipy', 'python3-setproctitle:amd64', 'python3-setuptools', 'python3-skbio', 'python3-sortedcontainers', 'python3-sqlalchemy', 'python3-statsmodels', 'python3-statsmodels-lib:amd64', 'python3-tblib', 'python3-tomlkit', 'python3-typeguard', 'python3-typing-extensions', 'python3-tzlocal', 'python3-urllib3', 'python3-werkzeug', 'python3-yaml', 'python3-zmq', 'python3.14', 'python3.14-minimal', 'qiime', 'rachis', 'readline-common'] 1m20.0s DUMP: (Reading database ... 4999 files and directories currently installed.) Purging configuration files for ca-certificates (20260816+nmu1) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for javascript-common (12+nmu1) ... dpkg: warning: ignoring request to remove libblas3 which is not installed dpkg: warning: ignoring request to remove libcom-err2 which is not installed dpkg: warning: ignoring request to remove libexpat1 which is not installed dpkg: warning: ignoring request to remove libffi8 which is not installed dpkg: warning: ignoring request to remove libgcrypt20 which is not installed dpkg: warning: ignoring request to remove libgfortran5 which is not installed dpkg: warning: ignoring request to remove libgomp1 which is not installed dpkg: warning: ignoring request to remove libgpg-error0 which is not installed Purging configuration files for libgssapi-krb5-2:amd64 (1.22.1-3) ... dpkg: warning: ignoring request to remove libhdf5-320 which is not installed dpkg: warning: ignoring request to remove libhdf5-hl-320 which is not installed Purging configuration files for libjs-bootstrap4 (4.6.2+dfsg-3) ... Purging configuration files for libjs-jquery (3.7.1+dfsg+~3.5.33-1) ... Purging configuration files for libjs-popper.js (1.16.1+ds-7) ... dpkg: warning: ignoring request to remove libk5crypto3 which is not installed dpkg: warning: ignoring request to remove libkeyutils1 which is not installed dpkg: warning: ignoring request to remove libkrb5-3 which is not installed dpkg: warning: ignoring request to remove libkrb5support0 which is not installed dpkg: warning: ignoring request to remove liblapack3 which is not installed dpkg: warning: ignoring request to remove liblzf1 which is not installed dpkg: warning: ignoring request to remove libncursesw6 which is not installed dpkg: warning: ignoring request to remove libnorm1t64 which is not installed dpkg: warning: ignoring request to remove libopenblas0 which is not installed dpkg: warning: ignoring request to remove libopenblas0-pthread which is not installed dpkg: warning: ignoring request to remove libpgm-5.3-0t64 which is not installed dpkg: warning: ignoring request to remove libpython3-stdlib which is not installed Purging configuration files for libpython3.14-minimal:amd64 (3.14.10-1) ... dpkg: warning: ignoring request to remove libpython3.14-stdlib which is not installed dpkg: warning: ignoring request to remove libqhull-r8.0 which is not installed Purging configuration files for libreadline8t64:amd64 (8.3-4) ... dpkg: warning: ignoring request to remove libsodium26 which is not installed dpkg: warning: ignoring request to remove libsqlite3-0 which is not installed dpkg: warning: ignoring request to remove libsz2 which is not installed dpkg: warning: ignoring request to remove libxml2-16 which is not installed dpkg: warning: ignoring request to remove libxslt1.1 which is not installed dpkg: warning: ignoring request to remove libyajl2 which is not installed dpkg: warning: ignoring request to remove libyaml-0-2 which is not installed dpkg: warning: ignoring request to remove libzmq5 which is not installed Purging configuration files for media-types (14.0.0) ... Purging configuration files for netbase (6.6) ... dpkg: warning: ignoring request to remove node-fortawesome-fontawesome-free which is not installed Purging configuration files for openssl (3.6.5-1) ... Purging configuration files for python3 (3.14.8-1) ... dpkg: warning: ignoring request to remove python3-array-api-compat which is not installed dpkg: warning: ignoring request to remove python3-bibtexparser which is not installed dpkg: warning: ignoring request to remove python3-biom-format which is not installed dpkg: warning: ignoring request to remove python3-blinker which is not installed dpkg: warning: ignoring request to remove python3-certifi which is not installed dpkg: warning: ignoring request to remove python3-cffi-backend which is not installed dpkg: warning: ignoring request to remove python3-chardet which is not installed dpkg: warning: ignoring request to remove python3-charset-normalizer which is not installed dpkg: warning: ignoring request to remove python3-click which is not installed dpkg: warning: ignoring request to remove python3-dateutil which is not installed dpkg: warning: ignoring request to remove python3-decorator which is not installed dpkg: warning: ignoring request to remove python3-dill which is not installed dpkg: warning: ignoring request to remove python3-filelock which is not installed dpkg: warning: ignoring request to remove python3-flask which is not installed dpkg: warning: ignoring request to remove python3-flask-sqlalchemy which is not installed dpkg: warning: ignoring request to remove python3-flufl.lock which is not installed dpkg: warning: ignoring request to remove python3-greenlet which is not installed dpkg: warning: ignoring request to remove python3-h5py which is not installed dpkg: warning: ignoring request to remove python3-h5py-serial which is not installed dpkg: warning: ignoring request to remove python3-hdmedians which is not installed dpkg: warning: ignoring request to remove python3-idna which is not installed dpkg: warning: ignoring request to remove python3-ijson which is not installed dpkg: warning: ignoring request to remove python3-itsdangerous which is not installed dpkg: warning: ignoring request to remove python3-jinja2 which is not installed dpkg: warning: ignoring request to remove python3-lxml which is not installed dpkg: warning: ignoring request to remove python3-markupsafe which is not installed dpkg: warning: ignoring request to remove python3-minimal which is not installed dpkg: warning: ignoring request to remove python3-networkx which is not installed Purging configuration files for python3-numpy (1:2.4.6+ds-5+b1) ... dpkg: warning: ignoring request to remove python3-numpy-dev which is not installed dpkg: warning: ignoring request to remove python3-packaging which is not installed dpkg: warning: ignoring request to remove python3-pandas which is not installed dpkg: warning: ignoring request to remove python3-pandas-lib which is not installed dpkg: warning: ignoring request to remove python3-parsl which is not installed dpkg: warning: ignoring request to remove python3-patsy which is not installed dpkg: warning: ignoring request to remove python3-platformdirs which is not installed dpkg: warning: ignoring request to remove python3-psutil which is not installed dpkg: warning: ignoring request to remove python3-public which is not installed dpkg: warning: ignoring request to remove python3-pyparsing which is not installed dpkg: warning: ignoring request to remove python3-pytz which is not installed dpkg: warning: ignoring request to remove python3-requests which is not installed dpkg: warning: ignoring request to remove python3-scipy which is not installed dpkg: warning: ignoring request to remove python3-setproctitle which is not installed dpkg: warning: ignoring request to remove python3-setuptools which is not installed dpkg: warning: ignoring request to remove python3-skbio which is not installed dpkg: warning: ignoring request to remove python3-sortedcontainers which is not installed dpkg: warning: ignoring request to remove python3-sqlalchemy which is not installed dpkg: warning: ignoring request to remove python3-statsmodels which is not installed dpkg: warning: ignoring request to remove python3-statsmodels-lib which is not installed dpkg: warning: ignoring request to remove python3-tblib which is not installed dpkg: warning: ignoring request to remove python3-tomlkit which is not installed dpkg: warning: ignoring request to remove python3-typeguard which is not installed dpkg: warning: ignoring request to remove python3-typing-extensions which is not installed dpkg: warning: ignoring request to remove python3-tzlocal which is not installed dpkg: warning: ignoring request to remove python3-urllib3 which is not installed dpkg: warning: ignoring request to remove python3-werkzeug which is not installed dpkg: warning: ignoring request to remove python3-yaml which is not installed dpkg: warning: ignoring request to remove python3-zmq which is not installed dpkg: warning: ignoring request to remove python3.14 which is not installed Purging configuration files for python3.14-minimal (3.14.10-1) ... dpkg: warning: ignoring request to remove qiime which is not installed dpkg: warning: ignoring request to remove rachis which is not installed Purging configuration files for readline-common (8.3-4) ... 1m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg', '--purge', 'ca-certificates', 'javascript-common', 'libblas3:amd64', 'libcom-err2:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgcrypt20:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgpg-error0:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-320:amd64', 'libhdf5-hl-320:amd64', 'libjs-bootstrap4', 'libjs-jquery', 'libjs-popper.js', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblzf1:amd64', 'libncursesw6:amd64', 'libnorm1t64:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpgm-5.3-0t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'libsodium26:amd64', 'libsqlite3-0:amd64', 'libsz2:amd64', 'libxml2-16:amd64', 'libxslt1.1:amd64', 'libyajl2:amd64', 'libyaml-0-2:amd64', 'libzmq5:amd64', 'media-types', 'netbase', 'node-fortawesome-fontawesome-free', 'openssl', 'python3', 'python3-array-api-compat', 'python3-bibtexparser', 'python3-biom-format', 'python3-blinker', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-click', 'python3-dateutil', 'python3-decorator', 'python3-dill', 'python3-filelock', 'python3-flask', 'python3-flask-sqlalchemy', 'python3-flufl.lock', 'python3-greenlet', 'python3-h5py', 'python3-h5py-serial', 'python3-hdmedians', 'python3-idna', 'python3-ijson', 'python3-itsdangerous', 'python3-jinja2', 'python3-lxml:amd64', 'python3-markupsafe', 'python3-minimal', 'python3-networkx', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-parsl', 'python3-patsy', 'python3-platformdirs', 'python3-psutil', 'python3-public', 'python3-pyparsing', 'python3-pytz', 'python3-requests', 'python3-scipy', 'python3-setproctitle:amd64', 'python3-setuptools', 'python3-skbio', 'python3-sortedcontainers', 'python3-sqlalchemy', 'python3-statsmodels', 'python3-statsmodels-lib:amd64', 'python3-tblib', 'python3-tomlkit', 'python3-typeguard', 'python3-typing-extensions', 'python3-tzlocal', 'python3-urllib3', 'python3-werkzeug', 'python3-yaml', 'python3-zmq', 'python3.14', 'python3.14-minimal', 'qiime', 'rachis', 'readline-common'] 1m20.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg', '--purge', 'q2-types'] 1m20.0s DUMP: dpkg: warning: ignoring request to remove q2-types which is not installed 1m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg', '--purge', 'q2-types'] 1m20.0s INFO: Running scripts post_purge 1m20.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_purge_exceptions'] 1m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_purge_exceptions'] 1m20.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg', '--purge', '--pending'] 1m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg', '--purge', '--pending'] 1m20.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg', '--remove', '--pending'] 1m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg', '--remove', '--pending'] 1m20.0s INFO: Running scripts post_test 1m20.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_test_exceptions'] 1m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'tmp/scripts/post_test_exceptions'] 1m20.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 1m20.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 1m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg-divert', '--list'] 1m20.3s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 1m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'dpkg-divert', '--list'] 1m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', 'clean'] 1m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3', 'apt-get', 'clean'] 1m20.4s DEBUG: Recording chroot state 1m21.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/shm'] 1m21.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/shm'] 1m21.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/console'] 1m21.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/console'] 1m21.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/ptmx'] 1m21.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/ptmx'] 1m21.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/pts'] 1m21.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/dev/pts'] 1m21.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/proc'] 1m21.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3/proc'] 1m21.4s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 1m21.5s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpsbj_e5p3'] 1m21.5s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpsbj_e5p3 1m21.5s INFO: PASS: Upgrading between Debian distributions. 1m21.5s INFO: PASS: All tests. 1m21.5s INFO: piuparts run ends. ret=0 End: 2026-11-14 03:20:58 GMT