Start: 2023-06-26 11:10:47 GMT [sid] Package: staden-common Source: staden Version: 2.0.0+b11-4 Installed-Size: 6097 Maintainer: Debian Med Packaging Team Architecture: all Depends: tk8.6 | wish Recommends: ksh | zsh Description: Architecture independent files for Staden Homepage: https://sourceforge.net/projects/staden/ Description-md5: 368671f3c5301070f6dd5064e174b05f Section: science Priority: optional Filename: pool/main/s/staden/staden-common_2.0.0+b11-4_all.deb Size: 1971660 MD5sum: 3b61f227398e2b5768817726083ba803 SHA256: a6d6da5232b7340702c4669cf79e74292929351a7a6ca288f8b712d786fdeb21 [experimental] Package: staden-common Source: staden Version: 2.0.0+b11-5~rc1 Installed-Size: 6097 Maintainer: Debian Med Packaging Team Architecture: all Depends: tk8.6 | wish Recommends: ksh | zsh Description: Architecture independent files for Staden Multi-Arch: foreign Homepage: https://sourceforge.net/projects/staden/ Description-md5: 368671f3c5301070f6dd5064e174b05f Section: science Priority: optional Filename: pool/main/s/staden/staden-common_2.0.0+b11-5~rc1_all.deb Size: 1971708 MD5sum: fc94660d8713c5a4f47d6b817895fe12 SHA256: dfaecd2269135afe4f7da57228094764a961ff4aa53654b2470c234681391c7d Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid_amd64.tar.gz -d sid -d experimental -B /srv/piuparts.debian.org/slave/refchroot/sid2experimental/reference-chroot-metadata.dat --apt 'staden-common=2.0.0+b11-5~rc1' 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.8~202306121314~1.1.7-9-g57dfbde6 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/sid_amd64.tar.gz -d sid -d experimental -B /srv/piuparts.debian.org/slave/refchroot/sid2experimental/reference-chroot-metadata.dat --apt 'staden-common=2.0.0+b11-5~rc1' 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-23-amd64 #1 SMP Debian 5.10.179-1 (2023-05-12) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp4okqpv49 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/sid_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp4okqpv49 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/sid_amd64.tar.gz'] 0m2.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/sid_amd64.tar.gz'] 0m2.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/proc'] 0m2.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/proc'] 0m2.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/pts'] 0m2.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/pts'] 0m2.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/ptmx'] 0m2.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/ptmx'] 0m2.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/console'] 0m2.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/console'] 0m2.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/shm'] 0m2.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/shm'] 0m2.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m2.2s DEBUG: Created policy-rc.d and chmodded it. 0m2.2s DEBUG: Created resolv.conf. 0m2.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp4okqpv49/tmp/scripts/ 0m2.2s INFO: Running scripts post_chroot_unpack 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', 'update'] 0m5.8s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [199 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9505 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6989 kB] Fetched 16.7 MB in 2s (6679 kB/s) Reading package lists... 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', 'update'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-yf', 'dist-upgrade'] 0m6.4s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-yf', 'dist-upgrade'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.9s DUMP: ad1a74445a807048317fd97791d35f70 - 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.9s INFO: Running scripts post_setup 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_dummy_users'] 0m7.7s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_dummy_users'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_forbid_home'] 0m7.7s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_forbid_home'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.7s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_minimize'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_minimize'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_zz_backports'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_setup_zz_backports'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DUMP: install ok installed adduser adduser 3.134 install ok installed apt apt 2.6.1 install ok installed base-files base-files 13 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2+b2 install ok installed bsdutils bsdutils 1:2.38.1-5+b1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-6 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2023.3 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-4 install ok installed dpkg dpkg 1.21.22 install ok installed e2fsprogs e2fsprogs 1.47.0-2 install ok installed findutils findutils 4.9.0-4 install ok installed gcc-13-base:amd64 gcc-13-base 13.1.0-6 install ok installed gpgv gpgv 2.2.40-1.1 install ok installed grep grep 3.8-5 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.6.1 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.9-1 install ok installed libaudit1:amd64 libaudit1 1:3.0.9-1 install ok installed libblkid1:amd64 libblkid1 2.38.1-5+b1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-9 install ok installed libc6:amd64 libc6 2.36-9 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b3 install ok installed libcap2:amd64 libcap2 1:2.66-4 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.35-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.270 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libgcc-s1:amd64 libgcc-s1 13.1.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.2-2 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.9-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.2 install ok installed libmd0:amd64 libmd0 1.1.0-1 install ok installed libmount1:amd64 libmount1 2.38.1-5+b1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6 install ok installed libpam-runtime libpam-runtime 1.5.2-6 install ok installed libpam0g:amd64 libpam0g 1.5.2-6 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b3 install ok installed libselinux1:amd64 libselinux1 3.4-1+b6 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b5 install ok installed libsepol2:amd64 libsepol2 3.4-2.1 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-5+b1 install ok installed libss2:amd64 libss2 1.47.0-2 install ok installed libstdc++6:amd64 libstdc++6 13.1.0-6 install ok installed libsystemd0:amd64 libsystemd0 253-4 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.4-4 install ok installed libudev1:amd64 libudev1 253-4 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-5+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-1 install ok installed login login 1:4.13+dfsg1-1+b1 install ok installed logsave logsave 1.47.0-2 install ok installed mawk mawk 1.3.4.20230525-1 install ok installed mount mount 2.38.1-5+b1 install ok installed ncurses-base ncurses-base 6.4-4 install ok installed ncurses-bin ncurses-bin 6.4-4 install ok installed passwd passwd 1:4.13+dfsg1-1+b1 install ok installed perl-base perl-base 5.36.0-7 install ok installed sed sed 4.9-1 install ok installed sysvinit-utils sysvinit-utils 3.06-4 install ok installed tar tar 1.34+dfsg-1.2 install ok installed tzdata tzdata 2023c-6 install ok installed usr-is-merged usr-is-merged 35 install ok installed util-linux util-linux 2.38.1-5+b1 install ok installed util-linux-extra util-linux-extra 2.38.1-5+b1 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/sid2experimental/reference-chroot-metadata.dat 0m7.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m8.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m8.2s INFO: Running scripts is_testable 0m8.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/is_testable_uninstallable'] 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/is_testable_uninstallable'] 0m8.3s INFO: Running scripts pre_test 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_test_exceptions'] 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_test_exceptions'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_test_root_password'] 0m8.3s DUMP: New password: Retype new password: passwd: password updated successfully 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_test_root_password'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'show', '--no-all-versions', 'staden-common'] 0m8.6s DUMP: Package: staden-common Source: staden Version: 2.0.0+b11-4 Installed-Size: 6097 Maintainer: Debian Med Packaging Team Architecture: all Depends: tk8.6 | wish Recommends: ksh | zsh Description-en: Architecture independent files for Staden Staden is a fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin). . Gap4 performs sequence assembly, contig ordering based on read pair data, contig joining based on sequence comparisons, assembly checking, repeat searching, experiment suggestion, read pair analysis and contig editing. It has graphical views of contigs, templates, readings and traces which all scroll in register. Contig editor searches and experiment suggestion routines use confidence values to calculate the confidence of the consensus sequence and hence identify only places requiring visual trace inspection or extra data. The result is extremely rapid finishing and a consensus of known accuracy. . Pregap4 provides a graphical user interface to set up the processing required to prepare trace data for assembly or analysis, and automates these processes. . Trev is a rapid and flexible viewer and editor for ABI, ALF, SCF and ZTR trace files. . Prefinish analyses partially completed sequence assemblies and suggests the most efficient set of experiments to help finish the project. . Tracediff and hetscan automatically locate mutations by comparing trace data against reference traces. They annotate the mutations found ready for viewing in gap4. . Spin analyses nucleotide sequences to find genes, restriction sites, motifs, etc. It can perform translations, find open reading frames, count codons, etc. Many results are presented graphically and a sliding sequence window is linked to the graphics cursor. Spin also compares pairs of sequences in many ways. It has very rapid dot matrix analysis, global and local alignment algorithms, plus a sliding sequence window linked to the graphical plots. It can compare nucleic acid against nucleic acid, protein against protein, and protein against nucleic acid. . This package contains the architecture independent data files and scripts that come with the Staden package. Description-md5: 368671f3c5301070f6dd5064e174b05f Homepage: https://sourceforge.net/projects/staden/ Section: science Priority: optional Filename: pool/main/s/staden/staden-common_2.0.0+b11-4_all.deb Size: 1971660 MD5sum: 3b61f227398e2b5768817726083ba803 SHA256: a6d6da5232b7340702c4669cf79e74292929351a7a6ca288f8b712d786fdeb21 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'show', '--no-all-versions', 'staden-common'] 0m8.6s INFO: apt-cache knows about the following packages: staden-common 0m8.6s INFO: Running scripts pre_install 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_database-server'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_database-server'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_exceptions'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_exceptions'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_extras'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_extras'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy'] 0m8.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy', 'staden-common'] 0m8.7s DUMP: staden-common: Installed: (none) Candidate: 2.0.0+b11-4 Version table: 2.0.0+b11-4 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy', 'staden-common'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-y', 'install', 'staden-common'] 0m11.9s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: fontconfig-config fonts-dejavu-core libbrotli1 libbsd0 libexpat1 libfontconfig1 libfreetype6 libpng16-16 libtcl8.6 libtk8.6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1 libxss1 tk8.6 x11-common Suggested packages: tcl8.6 Recommended packages: ksh | zsh The following NEW packages will be installed: fontconfig-config fonts-dejavu-core libbrotli1 libbsd0 libexpat1 libfontconfig1 libfreetype6 libpng16-16 libtcl8.6 libtk8.6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1 libxss1 staden-common tk8.6 x11-common 0 upgraded, 22 newly installed, 0 to remove and 0 not upgraded. Need to get 8513 kB of archives. After this operation, 24.4 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get:2 http://deb.debian.org/debian sid/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libbsd0 amd64 0.11.7-4 [115 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.5.0-2 [99.0 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libpng16-16 amd64 1.6.40-1 [275 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libfreetype6 amd64 2.12.1+dfsg-5 [399 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libtcl8.6 amd64 8.6.13+dfsg-2 [1035 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libx11-data all 2:1.8.6-1 [323 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libx11-6 amd64 2:1.8.6-1 [793 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libxft2 amd64 2.3.6-1 [61.8 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:18 http://deb.debian.org/debian sid/main amd64 x11-common all 1:7.7+23 [252 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libtk8.6 amd64 8.6.13-2 [781 kB] Get:21 http://deb.debian.org/debian sid/main amd64 tk8.6 amd64 8.6.13-2 [69.4 kB] Get:22 http://deb.debian.org/debian sid/main amd64 staden-common all 2.0.0+b11-4 [1972 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 8513 kB in 0s (66.7 MB/s) Selecting previously unselected package fonts-dejavu-core. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5418 files and directories currently installed.) Preparing to unpack .../00-fonts-dejavu-core_2.37-6_all.deb ... Unpacking fonts-dejavu-core (2.37-6) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../01-fontconfig-config_2.14.1-4_amd64.deb ... Unpacking fontconfig-config (2.14.1-4) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../02-libbrotli1_1.0.9-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b6) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../03-libbsd0_0.11.7-4_amd64.deb ... Unpacking libbsd0:amd64 (0.11.7-4) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../04-libexpat1_2.5.0-2_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-2) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../05-libpng16-16_1.6.40-1_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.40-1) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../06-libfreetype6_2.12.1+dfsg-5_amd64.deb ... Unpacking libfreetype6:amd64 (2.12.1+dfsg-5) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../07-libfontconfig1_2.14.1-4_amd64.deb ... Unpacking libfontconfig1:amd64 (2.14.1-4) ... Selecting previously unselected package libtcl8.6:amd64. Preparing to unpack .../08-libtcl8.6_8.6.13+dfsg-2_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.13+dfsg-2) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../09-libxau6_1%3a1.0.9-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../10-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../11-libxcb1_1.15-1_amd64.deb ... Unpacking libxcb1:amd64 (1.15-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../12-libx11-data_2%3a1.8.6-1_all.deb ... Unpacking libx11-data (2:1.8.6-1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../13-libx11-6_2%3a1.8.6-1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.6-1) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../14-libxrender1_1%3a0.9.10-1.1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../15-libxft2_2.3.6-1_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../16-libxext6_2%3a1.3.4-1+b1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b1) ... Selecting previously unselected package x11-common. Preparing to unpack .../17-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package libxss1:amd64. Preparing to unpack .../18-libxss1_1%3a1.2.3-1_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:amd64. Preparing to unpack .../19-libtk8.6_8.6.13-2_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.13-2) ... Selecting previously unselected package tk8.6. Preparing to unpack .../20-tk8.6_8.6.13-2_amd64.deb ... Unpacking tk8.6 (8.6.13-2) ... Selecting previously unselected package staden-common. Preparing to unpack .../21-staden-common_2.0.0+b11-4_all.deb ... Unpacking staden-common (2.0.0+b11-4) ... Setting up libexpat1:amd64 (2.5.0-2) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libx11-data (2:1.8.6-1) ... Setting up libpng16-16:amd64 (1.6.40-1) ... Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ... Setting up fonts-dejavu-core (2.37-6) ... Setting up libbsd0:amd64 (0.11.7-4) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up fontconfig-config (2.14.1-4) ... Setting up libfreetype6:amd64 (2.12.1+dfsg-5) ... Setting up libx11-6:amd64 (2:1.8.6-1) ... Setting up libfontconfig1:amd64 (2.14.1-4) ... Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libxft2:amd64 (2.3.6-1) ... Setting up libtk8.6:amd64 (8.6.13-2) ... Setting up tk8.6 (8.6.13-2) ... Setting up staden-common (2.0.0+b11-4) ... Processing triggers for libc-bin (2.36-9) ... 0m11.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-y', 'install', 'staden-common'] 0m11.9s INFO: Running scripts post_install 0m11.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_install_exceptions'] 0m11.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_install_exceptions'] 0m11.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m12.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m12.5s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp4okqpv49 to experimental 0m12.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main deb http://deb.debian.org/debian/ experimental main 0m12.5s INFO: Running scripts pre_distupgrade 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m12.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_exceptions'] 0m12.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_exceptions'] 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m12.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m12.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m12.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m12.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', 'update'] 0m14.3s DUMP: Hit:1 http://deb.debian.org/debian sid InRelease Get:2 http://deb.debian.org/debian experimental InRelease [101 kB] Get:3 http://deb.debian.org/debian experimental/main amd64 Packages [537 kB] Get:4 http://deb.debian.org/debian experimental/main Translation-en [332 kB] Fetched 970 kB in 1s (1491 kB/s) Reading package lists... 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', 'update'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-yf', 'dist-upgrade'] 0m14.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-yf', 'dist-upgrade'] 0m14.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m15.3s DUMP: 45e6a0cca9bbd0dc5e19f7fe90c102bd - 0m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m15.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'show', '--no-all-versions', 'staden-common'] 0m15.6s DUMP: Package: staden-common Source: staden Version: 2.0.0+b11-4 Installed-Size: 6097 Maintainer: Debian Med Packaging Team Architecture: all Depends: tk8.6 | wish Recommends: ksh | zsh Description-en: Architecture independent files for Staden Staden is a fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin). . Gap4 performs sequence assembly, contig ordering based on read pair data, contig joining based on sequence comparisons, assembly checking, repeat searching, experiment suggestion, read pair analysis and contig editing. It has graphical views of contigs, templates, readings and traces which all scroll in register. Contig editor searches and experiment suggestion routines use confidence values to calculate the confidence of the consensus sequence and hence identify only places requiring visual trace inspection or extra data. The result is extremely rapid finishing and a consensus of known accuracy. . Pregap4 provides a graphical user interface to set up the processing required to prepare trace data for assembly or analysis, and automates these processes. . Trev is a rapid and flexible viewer and editor for ABI, ALF, SCF and ZTR trace files. . Prefinish analyses partially completed sequence assemblies and suggests the most efficient set of experiments to help finish the project. . Tracediff and hetscan automatically locate mutations by comparing trace data against reference traces. They annotate the mutations found ready for viewing in gap4. . Spin analyses nucleotide sequences to find genes, restriction sites, motifs, etc. It can perform translations, find open reading frames, count codons, etc. Many results are presented graphically and a sliding sequence window is linked to the graphics cursor. Spin also compares pairs of sequences in many ways. It has very rapid dot matrix analysis, global and local alignment algorithms, plus a sliding sequence window linked to the graphical plots. It can compare nucleic acid against nucleic acid, protein against protein, and protein against nucleic acid. . This package contains the architecture independent data files and scripts that come with the Staden package. Description-md5: 368671f3c5301070f6dd5064e174b05f Homepage: https://sourceforge.net/projects/staden/ Section: science Priority: optional Filename: pool/main/s/staden/staden-common_2.0.0+b11-4_all.deb Size: 1971660 MD5sum: 3b61f227398e2b5768817726083ba803 SHA256: a6d6da5232b7340702c4669cf79e74292929351a7a6ca288f8b712d786fdeb21 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'show', '--no-all-versions', 'staden-common'] 0m15.6s INFO: apt-cache knows about the following packages: staden-common 0m15.6s INFO: Running scripts pre_install 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_database-server'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_database-server'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_exceptions'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_exceptions'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_extras'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_extras'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m15.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy'] 0m15.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 1 http://deb.debian.org/debian experimental/main amd64 Packages release o=Debian,a=experimental,n=rc-buggy,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m15.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy'] 0m15.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy', 'staden-common'] 0m15.8s DUMP: staden-common: Installed: 2.0.0+b11-4 Candidate: 2.0.0+b11-4 Version table: 2.0.0+b11-5~rc1 1 1 http://deb.debian.org/debian experimental/main amd64 Packages *** 2.0.0+b11-4 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m15.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy', 'staden-common'] 0m15.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-y', '-t', 'experimental', 'install', 'staden-common'] 0m17.0s DUMP: Reading package lists... Building dependency tree... Reading state information... Recommended packages: ksh | zsh The following packages will be upgraded: staden-common 1 upgraded, 0 newly installed, 0 to remove and 12 not upgraded. Need to get 1972 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://deb.debian.org/debian experimental/main amd64 staden-common all 2.0.0+b11-5~rc1 [1972 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1972 kB in 0s (36.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6840 files and directories currently installed.) Preparing to unpack .../staden-common_2.0.0+b11-5~rc1_all.deb ... Unpacking staden-common (2.0.0+b11-5~rc1) over (2.0.0+b11-4) ... Setting up staden-common (2.0.0+b11-5~rc1) ... 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-y', '-t', 'experimental', 'install', 'staden-common'] 0m17.0s INFO: Running scripts post_install 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_install_exceptions'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_install_exceptions'] 0m17.0s INFO: Running scripts post_distupgrade 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_exceptions'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_exceptions'] 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_zz_backports'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_distupgrade_zz_backports'] 0m17.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m17.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m17.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m17.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m17.9s INFO: Running scripts pre_install 0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_database-server'] 0m17.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_database-server'] 0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_exceptions'] 0m17.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_exceptions'] 0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_extras'] 0m17.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_extras'] 0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture'] 0m17.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture'] 0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m17.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy'] 0m17.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 1 http://deb.debian.org/debian experimental/main amd64 Packages release o=Debian,a=experimental,n=rc-buggy,l=Debian,c=main,b=amd64 origin deb.debian.org 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m17.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy'] 0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy', 'staden-common'] 0m18.0s DUMP: staden-common: Installed: 2.0.0+b11-5~rc1 Candidate: 2.0.0+b11-5~rc1 Version table: *** 2.0.0+b11-5~rc1 100 1 http://deb.debian.org/debian experimental/main amd64 Packages 100 /var/lib/dpkg/status 2.0.0+b11-4 500 500 http://deb.debian.org/debian sid/main amd64 Packages 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-cache', 'policy', 'staden-common'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-y', '-t', 'experimental', 'install', 'staden-common=2.0.0+b11-5~rc1'] 0m18.4s DUMP: Reading package lists... Building dependency tree... Reading state information... staden-common is already the newest version (2.0.0+b11-5~rc1). 0 upgraded, 0 newly installed, 0 to remove and 12 not upgraded. 0m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', '-y', '-t', 'experimental', 'install', 'staden-common=2.0.0+b11-5~rc1'] 0m18.4s INFO: Running scripts post_install 0m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_install_exceptions'] 0m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_install_exceptions'] 0m18.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m18.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m19.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', '-ac', '--ignore-obsolete'] 0m20.3s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', '-ac', '--ignore-obsolete'] 0m20.3s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m20.3s DUMP: 0.15.6 0m20.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m20.3s INFO: Running adequate version 0.15.6 now. 0m20.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'staden-common'] 0m20.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'staden-common'] 0m20.4s INFO: Running scripts pre_remove 0m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m21.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m21.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m21.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m21.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m21.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m21.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_exceptions'] 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/pre_remove_exceptions'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m21.6s DUMP: install ok installed adduser adduser 3.134 install ok installed apt apt 2.6.1 install ok installed base-files base-files 13 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2+b2 install ok installed bsdutils bsdutils 1:2.38.1-5+b1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-6 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2023.3 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-4 install ok installed dpkg dpkg 1.21.22 install ok installed e2fsprogs e2fsprogs 1.47.0-2 install ok installed findutils findutils 4.9.0-4 install ok installed fontconfig-config fontconfig-config 2.14.1-4 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-6 install ok installed gcc-13-base:amd64 gcc-13-base 13.1.0-6 install ok installed gpgv gpgv 2.2.40-1.1 install ok installed grep grep 3.8-5 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.6.1 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.9-1 install ok installed libaudit1:amd64 libaudit1 1:3.0.9-1 install ok installed libblkid1:amd64 libblkid1 2.38.1-5+b1 install ok installed libbrotli1:amd64 libbrotli1 1.0.9-2+b6 install ok installed libbsd0:amd64 libbsd0 0.11.7-4 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-9 install ok installed libc6:amd64 libc6 2.36-9 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b3 install ok installed libcap2:amd64 libcap2 1:2.66-4 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.35-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.270 install ok installed libexpat1:amd64 libexpat1 2.5.0-2 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfontconfig1:amd64 libfontconfig1 2.14.1-4 install ok installed libfreetype6:amd64 libfreetype6 2.12.1+dfsg-5 install ok installed libgcc-s1:amd64 libgcc-s1 13.1.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.2-2 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.9-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.2 install ok installed libmd0:amd64 libmd0 1.1.0-1 install ok installed libmount1:amd64 libmount1 2.38.1-5+b1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6 install ok installed libpam-runtime libpam-runtime 1.5.2-6 install ok installed libpam0g:amd64 libpam0g 1.5.2-6 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libpng16-16:amd64 libpng16-16 1.6.40-1 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b3 install ok installed libselinux1:amd64 libselinux1 3.4-1+b6 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b5 install ok installed libsepol2:amd64 libsepol2 3.4-2.1 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-5+b1 install ok installed libss2:amd64 libss2 1.47.0-2 install ok installed libstdc++6:amd64 libstdc++6 13.1.0-6 install ok installed libsystemd0:amd64 libsystemd0 253-4 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.13+dfsg-2 install ok installed libtinfo6:amd64 libtinfo6 6.4-4 install ok installed libtk8.6:amd64 libtk8.6 8.6.13-2 install ok installed libudev1:amd64 libudev1 253-4 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-5+b1 install ok installed libx11-6:amd64 libx11-6 2:1.8.6-1 install ok installed libx11-data libx11-data 2:1.8.6-1 install ok installed libxau6:amd64 libxau6 1:1.0.9-1 install ok installed libxcb1:amd64 libxcb1 1.15-1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b1 install ok installed libxft2:amd64 libxft2 2.3.6-1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1.1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-1 install ok installed login login 1:4.13+dfsg1-1+b1 install ok installed logsave logsave 1.47.0-2 install ok installed mawk mawk 1.3.4.20230525-1 install ok installed mount mount 2.38.1-5+b1 install ok installed ncurses-base ncurses-base 6.4-4 install ok installed ncurses-bin ncurses-bin 6.4-4 install ok installed passwd passwd 1:4.13+dfsg1-1+b1 install ok installed perl-base perl-base 5.36.0-7 install ok installed sed sed 4.9-1 install ok installed staden-common staden-common 2.0.0+b11-5~rc1 install ok installed sysvinit-utils sysvinit-utils 3.06-4 install ok installed tar tar 1.34+dfsg-1.2 install ok installed tk8.6 tk8.6 8.6.13-2 install ok installed tzdata tzdata 2023c-6 install ok installed usr-is-merged usr-is-merged 35 install ok installed util-linux util-linux 2.38.1-5+b1 install ok installed util-linux-extra util-linux-extra 2.38.1-5+b1 install ok installed x11-common x11-common 1:7.7+23 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', 'remove', 'fontconfig-config', 'fonts-dejavu-core', 'libbrotli1:amd64', 'libbsd0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libpng16-16:amd64', 'libtcl8.6:amd64', 'libtk8.6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'tk8.6', 'x11-common', 'staden-common'] 0m23.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: fontconfig-config fonts-dejavu-core libbrotli1 libbsd0 libexpat1 libfontconfig1 libfreetype6 libpng16-16 libtcl8.6 libtk8.6 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1 libxss1 staden-common tk8.6 x11-common 0 upgraded, 0 newly installed, 22 to remove and 0 not upgraded. After this operation, 24.4 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6840 files and directories currently installed.) Removing staden-common (2.0.0+b11-5~rc1) ... Removing tk8.6 (8.6.13-2) ... Removing libtk8.6:amd64 (8.6.13-2) ... Removing libxft2:amd64 (2.3.6-1) ... Removing libfontconfig1:amd64 (2.14.1-4) ... Removing fontconfig-config (2.14.1-4) ... Removing fonts-dejavu-core (2.37-6) ... Removing libfreetype6:amd64 (2.12.1+dfsg-5) ... Removing libbrotli1:amd64 (1.0.9-2+b6) ... Removing libxss1:amd64 (1:1.2.3-1) ... Removing libxrender1:amd64 (1:0.9.10-1.1) ... Removing libexpat1:amd64 (2.5.0-2) ... Removing libpng16-16:amd64 (1.6.40-1) ... Removing libtcl8.6:amd64 (8.6.13+dfsg-2) ... Removing libxext6:amd64 (2:1.3.4-1+b1) ... Removing x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libx11-6:amd64 (2:1.8.6-1) ... Removing libxcb1:amd64 (1.15-1) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.11.7-4) ... Removing libx11-data (2:1.8.6-1) ... Removing libxau6:amd64 (1:1.0.9-1) ... Processing triggers for libc-bin (2.36-9) ... 0m23.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', 'remove', 'fontconfig-config', 'fonts-dejavu-core', 'libbrotli1:amd64', 'libbsd0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libpng16-16:amd64', 'libtcl8.6:amd64', 'libtk8.6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'tk8.6', 'x11-common', 'staden-common'] 0m23.0s INFO: Running scripts post_remove 0m23.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_remove_exceptions'] 0m23.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_remove_exceptions'] 0m23.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg', '--purge', 'fontconfig-config', 'fonts-dejavu-core', 'libbrotli1:amd64', 'libbsd0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libpng16-16:amd64', 'libtcl8.6:amd64', 'libtk8.6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'tk8.6', 'x11-common'] 0m23.4s DUMP: (Reading database ... 5453 files and directories currently installed.) Purging configuration files for fontconfig-config (2.14.1-4) ... Purging configuration files for fonts-dejavu-core (2.37-6) ... dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed dpkg: warning: ignoring request to remove libtk8.6 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxss1 which isn't installed dpkg: warning: ignoring request to remove tk8.6 which isn't installed Purging configuration files for x11-common (1:7.7+23) ... 0m23.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg', '--purge', 'fontconfig-config', 'fonts-dejavu-core', 'libbrotli1:amd64', 'libbsd0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libpng16-16:amd64', 'libtcl8.6:amd64', 'libtk8.6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'tk8.6', 'x11-common'] 0m23.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg', '--purge', 'staden-common'] 0m23.4s DUMP: dpkg: warning: ignoring request to remove staden-common which isn't installed 0m23.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg', '--purge', 'staden-common'] 0m23.4s INFO: Running scripts post_purge 0m23.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_purge_exceptions'] 0m23.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_purge_exceptions'] 0m23.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg', '--purge', '--pending'] 0m23.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg', '--purge', '--pending'] 0m23.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg', '--remove', '--pending'] 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg', '--remove', '--pending'] 0m23.5s INFO: Running scripts post_test 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_test_exceptions'] 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'tmp/scripts/post_test_exceptions'] 0m23.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m23.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg-divert', '--list'] 0m24.0s DUMP: local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib 0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'dpkg-divert', '--list'] 0m24.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', 'clean'] 0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp4okqpv49', 'apt-get', 'clean'] 0m24.0s DEBUG: Recording chroot state 0m25.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/shm'] 0m25.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/shm'] 0m25.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/console'] 0m25.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/console'] 0m25.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/ptmx'] 0m25.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/ptmx'] 0m25.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/pts'] 0m25.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/dev/pts'] 0m25.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/proc'] 0m25.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp4okqpv49/proc'] 0m25.4s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m25.5s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp4okqpv49'] 0m25.5s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp4okqpv49 0m25.5s INFO: PASS: Upgrading between Debian distributions. 0m25.5s INFO: PASS: All tests. 0m25.5s INFO: piuparts run ends. ret=0 End: 2023-06-26 11:11:13 GMT