Start: 2014-04-21 17:34:54 UTC Package: libdeal.ii-dev Priority: extra Section: libdevel Installed-Size: 7752 Maintainer: Debian Science Maintainers Architecture: all Source: deal.ii Version: 6.3.1-1 Depends: libdeal.ii6.3.1 (>= 6.3.1), libblas-dev, liblapack-dev, libpetsc3.1-dev, libslepc3.0.0-dev, libtrilinos-dev (>= 9.0.2.dfsg-3), libscotchmetis-dev (>= 5.1.4.dfsg-2), libsuitesparse-dev, libnetcdf-dev, libboost-dev, libtbb-dev Suggests: libdeal.ii-dbg, deal.ii-doc, deal.ii-examples Filename: pool/main/d/deal.ii/libdeal.ii-dev_6.3.1-1_all.deb Size: 1280928 MD5sum: 03ed7a65c35ffc49ae4f87c09ac7cb18 SHA1: 1691c564add2fc3413dd32c1aeac2944868e4032 SHA256: dd987a2c557676ec7c4b179b99b90f3e5d9e5b70dac85a4a7bcba39dbc5169ae Description: Finite element library - development files deal.II is a C++ program library targeted at the computational solution of partial differential equations using adaptive finite elements. It uses state-of-the-art programming techniques to offer you a modern interface to the complex data structures and algorithms required. The main aim of deal.II is to enable rapid development of modern finite element codes, using among other aspects adaptive meshes and a wide array of tools classes often used in a finite element program. . This package contains development files for using optimized shared libraries. Homepage: http://www.dealii.org/ Tag: devel::library, qa::low-popcon Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 35m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt libdeal.ii-dev=6.3.1-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at http://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.58~201404171043~0.57-36-g04ccef9 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt libdeal.ii-dev=6.3.1-1 0m0.0s INFO: Running on: Linux piu-slave-bm-a 3.2.0-4-amd64 #1 SMP Debian 3.2.54-2 x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp3x_mos 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp3x_mos 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp3x_mos', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.7s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp3x_mos', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ squeeze main 0m1.8s DEBUG: Created policy-rc.d and chmodded it. 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'update'] 0m1.8s DUMP: Hit http://mirror.bm.debian.org squeeze Release.gpg Ign http://mirror.bm.debian.org/debian/ squeeze/main Translation-en Hit http://mirror.bm.debian.org squeeze Release Hit http://mirror.bm.debian.org squeeze/main amd64 Packages Reading package lists... 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'update'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', '-yf', 'dist-upgrade'] 0m2.1s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', '-yf', 'dist-upgrade'] 0m2.1s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp3x_mos/tmp/scripts/ 0m2.1s DEBUG: Copying scriptsdir /etc/piuparts/scripts-squeeze to /srv/piuparts.debian.org/tmp/tmp3x_mos/tmp/scripts/ 0m2.1s INFO: Running scripts post_setup 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_experimental'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_experimental'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_forbid_home'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_forbid_home'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m2.9s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (14.7 MB/s) Selecting previously deselected package adduser. (Reading database ... 6135 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'clean'] 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'clean'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--get-selections', '*'] 0m3.5s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install liblocale-gettext-perl install liblzma2 install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install ncurses-base install ncurses-bin install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--get-selections', '*'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg-divert', '--list'] 0m3.5s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg-divert', '--list'] 0m3.5s INFO: apt-cache does not know about any of the requested packages 0m3.5s INFO: Running scripts pre_test 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_test_root_password'] 0m3.5s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_test_root_password'] 0m3.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m3.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m4.5s DEBUG: No broken symlinks as far as we can find. 0m4.5s INFO: Running scripts pre_install 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_install_database-server'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_install_database-server'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_install_exceptions'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_install_exceptions'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_install_extras'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_install_extras'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-cache', 'show', 'libdeal.ii-dev=6.3.1-1'] 0m4.7s DUMP: Package: libdeal.ii-dev Priority: extra Section: libdevel Installed-Size: 7752 Maintainer: Debian Science Maintainers Architecture: all Source: deal.ii Version: 6.3.1-1 Depends: libdeal.ii6.3.1 (>= 6.3.1), libblas-dev, liblapack-dev, libpetsc3.1-dev, libslepc3.0.0-dev, libtrilinos-dev (>= 9.0.2.dfsg-3), libscotchmetis-dev (>= 5.1.4.dfsg-2), libsuitesparse-dev, libnetcdf-dev, libboost-dev, libtbb-dev Suggests: libdeal.ii-dbg, deal.ii-doc, deal.ii-examples Filename: pool/main/d/deal.ii/libdeal.ii-dev_6.3.1-1_all.deb Size: 1280928 MD5sum: 03ed7a65c35ffc49ae4f87c09ac7cb18 SHA1: 1691c564add2fc3413dd32c1aeac2944868e4032 SHA256: dd987a2c557676ec7c4b179b99b90f3e5d9e5b70dac85a4a7bcba39dbc5169ae Description: Finite element library - development files deal.II is a C++ program library targeted at the computational solution of partial differential equations using adaptive finite elements. It uses state-of-the-art programming techniques to offer you a modern interface to the complex data structures and algorithms required. The main aim of deal.II is to enable rapid development of modern finite element codes, using among other aspects adaptive meshes and a wide array of tools classes often used in a finite element program. . This package contains development files for using optimized shared libraries. Homepage: http://www.dealii.org/ Tag: devel::library, qa::low-popcon 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-cache', 'show', 'libdeal.ii-dev=6.3.1-1'] 0m4.7s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed Depends: libdeal.ii6.3.1 (>= 6.3.1), libblas-dev, liblapack-dev, libpetsc3.1-dev, libslepc3.0.0-dev, libtrilinos-dev (>= 9.0.2.dfsg-3), libscotchmetis-dev (>= 5.1.4.dfsg-2), libsuitesparse-dev, libnetcdf-dev, libboost-dev, libtbb-dev 0m4.7s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpv7SsBn/piuparts-depends-dummy'] 0m4.7s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmpv7SsBn/piuparts-depends-dummy.deb'. 0m4.7s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpv7SsBn/piuparts-depends-dummy'] 0m4.7s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmpv7SsBn/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmp3x_mos/tmp 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m4.7s DUMP: Selecting previously deselected package piuparts-depends-dummy. (Reading database ... 6258 files and directories currently installed.) Unpacking piuparts-depends-dummy (from tmp/piuparts-depends-dummy.deb) ... dpkg: dependency problems prevent configuration of piuparts-depends-dummy: piuparts-depends-dummy depends on libdeal.ii6.3.1 (>= 6.3.1); however: Package libdeal.ii6.3.1 is not installed. piuparts-depends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. piuparts-depends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. piuparts-depends-dummy depends on libpetsc3.1-dev; however: Package libpetsc3.1-dev is not installed. piuparts-depends-dummy depends on libslepc3.0.0-dev; however: Package libslepc3.0.0-dev is not installed. piuparts-depends-dummy depends on libtrilinos-dev (>= 9.0.2.dfsg-3); however: Package libtrilinos-dev is not installed. piuparts-depends-dummy depends on libscotchmetis-dev (>= 5.1.4.dfsg-2); however: Package libscotchmetis-dev is not installed. piuparts-depends-dummy depends on libsuitesparse-dev; however: Package libsuitesparse-dev is not installed. piuparts-depends-dummy depends on libnetcdf-dev; however: Package libnetcdf-dev is not installed. piuparts-depends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. piuparts-depends-dummy depends on libtbb-dev; however: Package libtbb-dev is not installed. dpkg: error processing piuparts-depends-dummy (--install): dependency problems - leaving unconfigured Errors were encountered while processing: piuparts-depends-dummy 0m4.7s DEBUG: Command failed (status=1), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', '-yf', 'install'] 0m21.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Correcting dependencies... Done The following extra packages will be installed: binutils ca-certificates cpp cpp-4.4 g++-4.4 gcc gcc-4.4 gfortran gfortran-4.4 libamd2.2.0 libarpack2 libarpack2-dev libblas-dev libblas3gf libboost-dev libboost1.42-dev libbtf1.1.0 libc-dev-bin libc6-dev libcamd2.2.0 libccolamd2.7.1 libcholmod1.7.1 libcolamd2.7.1 libcsparse2.2.3 libcurl3-gnutls libcxsparse2.2.3 libdeal.ii6.3.1 libexpat1 libexpat1-dev libgcrypt11 libgfortran3 libgmp3c2 libgnutls26 libgomp1 libgpg-error0 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-1.8.4 libhdf5-openmpi-dev libhypre-2.4.0 libhypre-dev libibverbs-dev libibverbs1 libicu44 libidn11 libjpeg62 libjpeg62-dev libk5crypto3 libkeyutils1 libklu1.1.0 libkrb5-3 libkrb5support0 liblapack-dev liblapack3gf libldap-2.4-2 libldl2.0.1 libmpfr4 libnetcdf-dev libnetcdf6 libnuma1 libopenmpi-dev libopenmpi1.3 libpetsc3.1 libpetsc3.1-dev libpthread-stubs0 libpthread-stubs0-dev libsasl2-2 libscotch-5.1 libscotch-dev libscotchmetis-dev libslepc3.0.0 libslepc3.0.0-dev libspooles-dev libspooles2.2 libssl0.9.8 libstdc++6-4.4-dev libsuitesparse-dev libsuperlu3 libsuperlu3-dev libtasn1-3 libtbb-dev libtbb2 libtorque2 libtrilinos libtrilinos-dev libumfpack5.4.0 libx11-6 libx11-data libx11-dev libxau-dev libxau6 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 linux-libc-dev mpi-default-dev openmpi-bin openmpi-common openssl x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev xtrans-dev zlib1g-dev Suggested packages: binutils-doc cpp-doc gcc-4.4-locales g++-4.4-multilib gcc-4.4-doc libstdc++6-4.4-dbg gcc-multilib make manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc gcc-4.4-multilib libmudflap0-4.4-dev libgcc1-dbg libgomp1-dbg libmudflap0-dbg libcloog-ppl0 libppl-c2 libppl7 gfortran-multilib gfortran-doc gfortran-4.4-multilib gfortran-4.4-doc libgfortran3-dbg libboost1.42-doc libboost-date-time1.42-dev libboost-filesystem1.42-dev libboost-graph-parallel1.42-dev libboost-graph1.42-dev libboost-iostreams1.42-dev libboost-math1.42-dev libboost-mpi1.42-dev libboost-program-options1.42-dev libboost-python1.42-dev libboost-regex1.42-dev libboost-serialization1.42-dev libboost-signals1.42-dev libboost-system1.42-dev libboost-test1.42-dev libboost-thread1.42-dev libboost-wave1.42-dev xsltproc doxygen docbook-xml docbook-xsl default-jdk fop glibc-doc rng-tools gnutls-bin krb5-doc krb5-user libhdf5-doc hypre-doc netcdf-bin netcdf-doc petsc-dev libpetsc3.1-dbg petsc3.1-doc libluminate-dev libslepc3.0.0-dbg slepc3.0.0-doc spooles-doc libstdc++6-4.4-doc tbb-examples libtbb-doc libtrilinos-doc Recommended packages: atlas3-base pkg-config libsasl2-modules openmpi-checkpoint The following NEW packages will be installed: binutils ca-certificates cpp cpp-4.4 g++-4.4 gcc gcc-4.4 gfortran gfortran-4.4 libamd2.2.0 libarpack2 libarpack2-dev libblas-dev libblas3gf libboost-dev libboost1.42-dev libbtf1.1.0 libc-dev-bin libc6-dev libcamd2.2.0 libccolamd2.7.1 libcholmod1.7.1 libcolamd2.7.1 libcsparse2.2.3 libcurl3-gnutls libcxsparse2.2.3 libdeal.ii6.3.1 libexpat1 libexpat1-dev libgcrypt11 libgfortran3 libgmp3c2 libgnutls26 libgomp1 libgpg-error0 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-1.8.4 libhdf5-openmpi-dev libhypre-2.4.0 libhypre-dev libibverbs-dev libibverbs1 libicu44 libidn11 libjpeg62 libjpeg62-dev libk5crypto3 libkeyutils1 libklu1.1.0 libkrb5-3 libkrb5support0 liblapack-dev liblapack3gf libldap-2.4-2 libldl2.0.1 libmpfr4 libnetcdf-dev libnetcdf6 libnuma1 libopenmpi-dev libopenmpi1.3 libpetsc3.1 libpetsc3.1-dev libpthread-stubs0 libpthread-stubs0-dev libsasl2-2 libscotch-5.1 libscotch-dev libscotchmetis-dev libslepc3.0.0 libslepc3.0.0-dev libspooles-dev libspooles2.2 libssl0.9.8 libstdc++6-4.4-dev libsuitesparse-dev libsuperlu3 libsuperlu3-dev libtasn1-3 libtbb-dev libtbb2 libtorque2 libtrilinos libtrilinos-dev libumfpack5.4.0 libx11-6 libx11-data libx11-dev libxau-dev libxau6 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 linux-libc-dev mpi-default-dev openmpi-bin openmpi-common openssl x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev xtrans-dev zlib1g-dev 0 upgraded, 106 newly installed, 0 to remove and 0 not upgraded. 1 not fully installed or removed. Need to get 133 MB of archives. After this operation, 546 MB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libgfortran3 amd64 4.4.5-8 [291 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main libibverbs1 amd64 1.1.3-2 [33.7 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main libnuma1 amd64 2.0.5-1 [26.7 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main libtorque2 amd64 2.4.8+dfsg-9squeeze3 [115 kB] Get:5 http://mirror.bm.debian.org/debian/ squeeze/main libopenmpi1.3 amd64 1.4.2-4 [1400 kB] Get:6 http://mirror.bm.debian.org/debian/ squeeze/main libamd2.2.0 amd64 1:3.4.0-2 [29.2 kB] Get:7 http://mirror.bm.debian.org/debian/ squeeze/main libblas3gf amd64 1.2-8 [229 kB] Get:8 http://mirror.bm.debian.org/debian/ squeeze/main libhdf5-openmpi-1.8.4 amd64 1.8.4-patch1-2 [1357 kB] Get:9 http://mirror.bm.debian.org/debian/ squeeze/main liblapack3gf amd64 3.2.1-8 [4434 kB] Get:10 http://mirror.bm.debian.org/debian/ squeeze/main libsuperlu3 amd64 3.0+20070106-3 [170 kB] Get:11 http://mirror.bm.debian.org/debian/ squeeze/main libhypre-2.4.0 amd64 2.4.0b-7 [1752 kB] Get:12 http://mirror.bm.debian.org/debian/ squeeze/main libscotch-5.1 amd64 5.1.8a.dfsg-2 [198 kB] Get:13 http://mirror.bm.debian.org/debian/ squeeze/main libspooles2.2 amd64 2.2-8 [566 kB] Get:14 http://mirror.bm.debian.org/debian/ squeeze/main libumfpack5.4.0 amd64 1:3.4.0-2 [388 kB] Get:15 http://mirror.bm.debian.org/debian/ squeeze/main libxau6 amd64 1:1.0.6-1 [16.8 kB] Get:16 http://mirror.bm.debian.org/debian/ squeeze/main libxdmcp6 amd64 1:1.0.3-2 [19.3 kB] Get:17 http://mirror.bm.debian.org/debian/ squeeze/main libxcb1 amd64 1.6-1+squeeze1 [44.3 kB] Get:18 http://mirror.bm.debian.org/debian/ squeeze/main libx11-data all 2:1.3.3-4+squeeze1 [184 kB] Get:19 http://mirror.bm.debian.org/debian/ squeeze/main libx11-6 amd64 2:1.3.3-4+squeeze1 [847 kB] Get:20 http://mirror.bm.debian.org/debian/ squeeze/main openmpi-common all 1.4.2-4 [89.5 kB] Get:21 http://mirror.bm.debian.org/debian/ squeeze/main openmpi-bin amd64 1.4.2-4 [165 kB] Get:22 http://mirror.bm.debian.org/debian/ squeeze/main libpetsc3.1 amd64 3.1.dfsg-7 [2192 kB] Get:23 http://mirror.bm.debian.org/debian/ squeeze/main libarpack2 amd64 2.1+parpack96.dfsg-3+b1 [289 kB] Get:24 http://mirror.bm.debian.org/debian/ squeeze/main libslepc3.0.0 amd64 3.0.0-p7.dfsg-7.1 [178 kB] Get:25 http://mirror.bm.debian.org/debian/ squeeze/main libtbb2 amd64 3.0+r035-1 [99.9 kB] Get:26 http://mirror.bm.debian.org/debian/ squeeze/main libexpat1 amd64 2.0.1-7+squeeze1 [138 kB] Get:27 http://mirror.bm.debian.org/debian/ squeeze/main libtrilinos amd64 10.0.4.dfsg-1.1+b1 [27.1 MB] Get:28 http://mirror.bm.debian.org/debian/ squeeze/main libdeal.ii6.3.1 amd64 6.3.1-1 [15.0 MB] Get:29 http://mirror.bm.debian.org/debian/ squeeze/main libblas-dev amd64 1.2-8 [252 kB] Get:30 http://mirror.bm.debian.org/debian/ squeeze/main liblapack-dev amd64 3.2.1-8 [4817 kB] Get:31 http://mirror.bm.debian.org/debian/ squeeze/main libibverbs-dev amd64 1.1.3-2 [83.3 kB] Get:32 http://mirror.bm.debian.org/debian/ squeeze/main libopenmpi-dev amd64 1.4.2-4 [2726 kB] Get:33 http://mirror.bm.debian.org/debian/ squeeze/main libgmp3c2 amd64 2:4.3.2+dfsg-1 [313 kB] Get:34 http://mirror.bm.debian.org/debian/ squeeze/main libmpfr4 amd64 3.0.0-2 [474 kB] Get:35 http://mirror.bm.debian.org/debian/ squeeze/main cpp-4.4 amd64 4.4.5-8 [3873 kB] Get:36 http://mirror.bm.debian.org/debian/ squeeze/main cpp amd64 4:4.4.5-1 [15.0 kB] Get:37 http://mirror.bm.debian.org/debian/ squeeze/main binutils amd64 2.20.1-16 [3993 kB] Get:38 http://mirror.bm.debian.org/debian/ squeeze/main libgomp1 amd64 4.4.5-8 [25.3 kB] Get:39 http://mirror.bm.debian.org/debian/ squeeze/main gcc-4.4 amd64 4.4.5-8 [2688 kB] Get:40 http://mirror.bm.debian.org/debian/ squeeze/main gcc amd64 4:4.4.5-1 [4970 B] Get:41 http://mirror.bm.debian.org/debian/ squeeze/main libc-dev-bin amd64 2.11.3-4 [210 kB] Get:42 http://mirror.bm.debian.org/debian/ squeeze/main linux-libc-dev amd64 2.6.32-48squeeze4 [839 kB] Get:43 http://mirror.bm.debian.org/debian/ squeeze/main libc6-dev amd64 2.11.3-4 [2593 kB] Get:44 http://mirror.bm.debian.org/debian/ squeeze/main gfortran-4.4 amd64 4.4.5-8 [4441 kB] Get:45 http://mirror.bm.debian.org/debian/ squeeze/main gfortran amd64 4:4.4.5-1 [1130 B] Get:46 http://mirror.bm.debian.org/debian/ squeeze/main x11-common all 1:7.5+8+squeeze1 [279 kB] Get:47 http://mirror.bm.debian.org/debian/ squeeze/main x11proto-core-dev all 7.0.16-1 [92.2 kB] Get:48 http://mirror.bm.debian.org/debian/ squeeze/main libxau-dev amd64 1:1.0.6-1 [20.2 kB] Get:49 http://mirror.bm.debian.org/debian/ squeeze/main libxdmcp-dev amd64 1:1.0.3-2 [22.9 kB] Get:50 http://mirror.bm.debian.org/debian/ squeeze/main x11proto-input-dev all 2.0-2 [63.1 kB] Get:51 http://mirror.bm.debian.org/debian/ squeeze/main x11proto-kb-dev all 1.0.4-1 [27.3 kB] Get:52 http://mirror.bm.debian.org/debian/ squeeze/main xtrans-dev all 1.2.5-1 [68.4 kB] Get:53 http://mirror.bm.debian.org/debian/ squeeze/main libpthread-stubs0 amd64 0.3-2 [3172 B] Get:54 http://mirror.bm.debian.org/debian/ squeeze/main libpthread-stubs0-dev amd64 0.3-2 [3504 B] Get:55 http://mirror.bm.debian.org/debian/ squeeze/main libxcb1-dev amd64 1.6-1+squeeze1 [80.9 kB] Get:56 http://mirror.bm.debian.org/debian/ squeeze/main libx11-dev amd64 2:1.3.3-4+squeeze1 [3516 kB] Get:57 http://mirror.bm.debian.org/debian/ squeeze/main libcamd2.2.0 amd64 1:3.4.0-2 [27.7 kB] Get:58 http://mirror.bm.debian.org/debian/ squeeze/main libbtf1.1.0 amd64 1:3.4.0-2 [13.9 kB] Get:59 http://mirror.bm.debian.org/debian/ squeeze/main libcolamd2.7.1 amd64 1:3.4.0-2 [22.2 kB] Get:60 http://mirror.bm.debian.org/debian/ squeeze/main libccolamd2.7.1 amd64 1:3.4.0-2 [31.0 kB] Get:61 http://mirror.bm.debian.org/debian/ squeeze/main libcholmod1.7.1 amd64 1:3.4.0-2 [456 kB] Get:62 http://mirror.bm.debian.org/debian/ squeeze/main libcsparse2.2.3 amd64 1:3.4.0-2 [29.8 kB] Get:63 http://mirror.bm.debian.org/debian/ squeeze/main libcxsparse2.2.3 amd64 1:3.4.0-2 [110 kB] Get:64 http://mirror.bm.debian.org/debian/ squeeze/main libklu1.1.0 amd64 1:3.4.0-2 [109 kB] Get:65 http://mirror.bm.debian.org/debian/ squeeze/main libldl2.0.1 amd64 1:3.4.0-2 [12.5 kB] Get:66 http://mirror.bm.debian.org/debian/ squeeze/main libsuitesparse-dev amd64 1:3.4.0-2 [1578 kB] Get:67 http://mirror.bm.debian.org/debian/ squeeze/main libsuperlu3-dev amd64 3.0+20070106-3 [573 kB] Get:68 http://mirror.bm.debian.org/debian/ squeeze/main mpi-default-dev amd64 0.6 [3202 B] Get:69 http://mirror.bm.debian.org/debian/ squeeze/main libspooles-dev amd64 2.2-8 [799 kB] Get:70 http://mirror.bm.debian.org/debian/ squeeze/main libhypre-dev all 2.4.0b-7 [160 kB] Get:71 http://mirror.bm.debian.org/debian/ squeeze/main zlib1g-dev amd64 1:1.2.3.4.dfsg-3 [192 kB] Get:72 http://mirror.bm.debian.org/debian/ squeeze/main libscotch-dev amd64 5.1.8a.dfsg-2 [331 kB] Get:73 http://mirror.bm.debian.org/debian/ squeeze/main libjpeg62 amd64 6b1-1 [94.0 kB] Get:74 http://mirror.bm.debian.org/debian/ squeeze/main libjpeg62-dev amd64 6b1-1 [201 kB] Get:75 http://mirror.bm.debian.org/debian/ squeeze/main libhdf5-openmpi-dev amd64 1.8.4-patch1-2 [2190 kB] Get:76 http://mirror.bm.debian.org/debian/ squeeze/main libhdf5-mpi-dev amd64 1.8.4-patch1-2 [18.3 kB] Get:77 http://mirror.bm.debian.org/debian/ squeeze/main libpetsc3.1-dev amd64 3.1.dfsg-7 [5181 kB] Get:78 http://mirror.bm.debian.org/debian/ squeeze/main libarpack2-dev amd64 2.1+parpack96.dfsg-3+b1 [719 kB] Get:79 http://mirror.bm.debian.org/debian/ squeeze/main libslepc3.0.0-dev amd64 3.0.0-p7.dfsg-7.1 [986 kB] Get:80 http://mirror.bm.debian.org/debian/ squeeze/main libexpat1-dev amd64 2.0.1-7+squeeze1 [223 kB] Get:81 http://mirror.bm.debian.org/debian/ squeeze/main libtrilinos-dev amd64 10.0.4.dfsg-1.1+b1 [3901 kB] Get:82 http://mirror.bm.debian.org/debian/ squeeze/main libscotchmetis-dev amd64 5.1.8a.dfsg-2 [28.5 kB] Get:83 http://mirror.bm.debian.org/debian/ squeeze/main libgpg-error0 amd64 1.6-1 [43.9 kB] Get:84 http://mirror.bm.debian.org/debian/ squeeze/main libgcrypt11 amd64 1.4.5-2+squeeze1 [282 kB] Get:85 http://mirror.bm.debian.org/debian/ squeeze/main libtasn1-3 amd64 2.7-1+squeeze+1 [63.1 kB] Get:86 http://mirror.bm.debian.org/debian/ squeeze/main libgnutls26 amd64 2.8.6-1+squeeze2 [564 kB] Get:87 http://mirror.bm.debian.org/debian/ squeeze/main libkeyutils1 amd64 1.4-1 [6942 B] Get:88 http://mirror.bm.debian.org/debian/ squeeze/main libkrb5support0 amd64 1.8.3+dfsg-4squeeze7 [46.5 kB] Get:89 http://mirror.bm.debian.org/debian/ squeeze/main libk5crypto3 amd64 1.8.3+dfsg-4squeeze7 [106 kB] Get:90 http://mirror.bm.debian.org/debian/ squeeze/main libkrb5-3 amd64 1.8.3+dfsg-4squeeze7 [374 kB] Get:91 http://mirror.bm.debian.org/debian/ squeeze/main libgssapi-krb5-2 amd64 1.8.3+dfsg-4squeeze7 [131 kB] Get:92 http://mirror.bm.debian.org/debian/ squeeze/main libidn11 amd64 1.15-2 [158 kB] Get:93 http://mirror.bm.debian.org/debian/ squeeze/main libsasl2-2 amd64 2.1.23.dfsg1-7 [115 kB] Get:94 http://mirror.bm.debian.org/debian/ squeeze/main libldap-2.4-2 amd64 2.4.23-7.3 [211 kB] Get:95 http://mirror.bm.debian.org/debian/ squeeze/main libssl0.9.8 amd64 0.9.8o-4squeeze14 [1002 kB] Get:96 http://mirror.bm.debian.org/debian/ squeeze/main openssl amd64 0.9.8o-4squeeze14 [1060 kB] Get:97 http://mirror.bm.debian.org/debian/ squeeze/main ca-certificates all 20090814+nmu3squeeze1 [146 kB] Get:98 http://mirror.bm.debian.org/debian/ squeeze/main libcurl3-gnutls amd64 7.21.0-2.1+squeeze7 [266 kB] Get:99 http://mirror.bm.debian.org/debian/ squeeze/main libnetcdf6 amd64 1:4.1.1-5 [520 kB] Get:100 http://mirror.bm.debian.org/debian/ squeeze/main libnetcdf-dev amd64 1:4.1.1-5 [660 kB] Get:101 http://mirror.bm.debian.org/debian/ squeeze/main libicu44 amd64 4.4.1-8+squeeze2 [7065 kB] Get:102 http://mirror.bm.debian.org/debian/ squeeze/main g++-4.4 amd64 4.4.5-8 [5515 kB] Get:103 http://mirror.bm.debian.org/debian/ squeeze/main libstdc++6-4.4-dev amd64 4.4.5-8 [1526 kB] Get:104 http://mirror.bm.debian.org/debian/ squeeze/main libboost1.42-dev amd64 1.42.0-4 [6441 kB] Get:105 http://mirror.bm.debian.org/debian/ squeeze/main libboost-dev amd64 1.42.0.1 [1958 B] Get:106 http://mirror.bm.debian.org/debian/ squeeze/main libtbb-dev amd64 3.0+r035-1 [144 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 133 MB in 4s (27.8 MB/s) Selecting previously deselected package libgfortran3. (Reading database ... 6258 files and directories currently installed.) Unpacking libgfortran3 (from .../libgfortran3_4.4.5-8_amd64.deb) ... Selecting previously deselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.3-2_amd64.deb) ... Selecting previously deselected package libnuma1. Unpacking libnuma1 (from .../libnuma1_2.0.5-1_amd64.deb) ... Selecting previously deselected package libtorque2. Unpacking libtorque2 (from .../libtorque2_2.4.8+dfsg-9squeeze3_amd64.deb) ... Selecting previously deselected package libopenmpi1.3. Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.2-4_amd64.deb) ... Selecting previously deselected package libamd2.2.0. Unpacking libamd2.2.0 (from .../libamd2.2.0_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libblas3gf. Unpacking libblas3gf (from .../libblas3gf_1.2-8_amd64.deb) ... Selecting previously deselected package libhdf5-openmpi-1.8.4. Unpacking libhdf5-openmpi-1.8.4 (from .../libhdf5-openmpi-1.8.4_1.8.4-patch1-2_amd64.deb) ... Selecting previously deselected package liblapack3gf. Unpacking liblapack3gf (from .../liblapack3gf_3.2.1-8_amd64.deb) ... Selecting previously deselected package libsuperlu3. Unpacking libsuperlu3 (from .../libsuperlu3_3.0+20070106-3_amd64.deb) ... Selecting previously deselected package libhypre-2.4.0. Unpacking libhypre-2.4.0 (from .../libhypre-2.4.0_2.4.0b-7_amd64.deb) ... Selecting previously deselected package libscotch-5.1. Unpacking libscotch-5.1 (from .../libscotch-5.1_5.1.8a.dfsg-2_amd64.deb) ... Selecting previously deselected package libspooles2.2. Unpacking libspooles2.2 (from .../libspooles2.2_2.2-8_amd64.deb) ... Selecting previously deselected package libumfpack5.4.0. Unpacking libumfpack5.4.0 (from .../libumfpack5.4.0_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.6-1_amd64.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.3-2_amd64.deb) ... Selecting previously deselected package libxcb1. Unpacking libxcb1 (from .../libxcb1_1.6-1+squeeze1_amd64.deb) ... Selecting previously deselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.3.3-4+squeeze1_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.3.3-4+squeeze1_amd64.deb) ... Selecting previously deselected package openmpi-common. Unpacking openmpi-common (from .../openmpi-common_1.4.2-4_all.deb) ... Selecting previously deselected package openmpi-bin. Unpacking openmpi-bin (from .../openmpi-bin_1.4.2-4_amd64.deb) ... Selecting previously deselected package libpetsc3.1. Unpacking libpetsc3.1 (from .../libpetsc3.1_3.1.dfsg-7_amd64.deb) ... Selecting previously deselected package libarpack2. Unpacking libarpack2 (from .../libarpack2_2.1+parpack96.dfsg-3+b1_amd64.deb) ... Selecting previously deselected package libslepc3.0.0. Unpacking libslepc3.0.0 (from .../libslepc3.0.0_3.0.0-p7.dfsg-7.1_amd64.deb) ... Selecting previously deselected package libtbb2. Unpacking libtbb2 (from .../libtbb2_3.0+r035-1_amd64.deb) ... Selecting previously deselected package libexpat1. Unpacking libexpat1 (from .../libexpat1_2.0.1-7+squeeze1_amd64.deb) ... Selecting previously deselected package libtrilinos. Unpacking libtrilinos (from .../libtrilinos_10.0.4.dfsg-1.1+b1_amd64.deb) ... Selecting previously deselected package libdeal.ii6.3.1. Unpacking libdeal.ii6.3.1 (from .../libdeal.ii6.3.1_6.3.1-1_amd64.deb) ... Selecting previously deselected package libblas-dev. Unpacking libblas-dev (from .../libblas-dev_1.2-8_amd64.deb) ... Selecting previously deselected package liblapack-dev. Unpacking liblapack-dev (from .../liblapack-dev_3.2.1-8_amd64.deb) ... Selecting previously deselected package libibverbs-dev. Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.3-2_amd64.deb) ... Selecting previously deselected package libopenmpi-dev. Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.4.2-4_amd64.deb) ... Selecting previously deselected package libgmp3c2. Unpacking libgmp3c2 (from .../libgmp3c2_2%3a4.3.2+dfsg-1_amd64.deb) ... Selecting previously deselected package libmpfr4. Unpacking libmpfr4 (from .../libmpfr4_3.0.0-2_amd64.deb) ... Selecting previously deselected package cpp-4.4. Unpacking cpp-4.4 (from .../cpp-4.4_4.4.5-8_amd64.deb) ... Selecting previously deselected package cpp. Unpacking cpp (from .../cpp_4%3a4.4.5-1_amd64.deb) ... Selecting previously deselected package binutils. Unpacking binutils (from .../binutils_2.20.1-16_amd64.deb) ... Selecting previously deselected package libgomp1. Unpacking libgomp1 (from .../libgomp1_4.4.5-8_amd64.deb) ... Selecting previously deselected package gcc-4.4. Unpacking gcc-4.4 (from .../gcc-4.4_4.4.5-8_amd64.deb) ... Selecting previously deselected package gcc. Unpacking gcc (from .../gcc_4%3a4.4.5-1_amd64.deb) ... Selecting previously deselected package libc-dev-bin. Unpacking libc-dev-bin (from .../libc-dev-bin_2.11.3-4_amd64.deb) ... Selecting previously deselected package linux-libc-dev. Unpacking linux-libc-dev (from .../linux-libc-dev_2.6.32-48squeeze4_amd64.deb) ... Selecting previously deselected package libc6-dev. Unpacking libc6-dev (from .../libc6-dev_2.11.3-4_amd64.deb) ... Selecting previously deselected package gfortran-4.4. Unpacking gfortran-4.4 (from .../gfortran-4.4_4.4.5-8_amd64.deb) ... Selecting previously deselected package gfortran. Unpacking gfortran (from .../gfortran_4%3a4.4.5-1_amd64.deb) ... Selecting previously deselected package x11-common. Unpacking x11-common (from .../x11-common_1%3a7.5+8+squeeze1_all.deb) ... Selecting previously deselected package x11proto-core-dev. Unpacking x11proto-core-dev (from .../x11proto-core-dev_7.0.16-1_all.deb) ... Selecting previously deselected package libxau-dev. Unpacking libxau-dev (from .../libxau-dev_1%3a1.0.6-1_amd64.deb) ... Selecting previously deselected package libxdmcp-dev. Unpacking libxdmcp-dev (from .../libxdmcp-dev_1%3a1.0.3-2_amd64.deb) ... Selecting previously deselected package x11proto-input-dev. Unpacking x11proto-input-dev (from .../x11proto-input-dev_2.0-2_all.deb) ... Selecting previously deselected package x11proto-kb-dev. Unpacking x11proto-kb-dev (from .../x11proto-kb-dev_1.0.4-1_all.deb) ... Setting up x11-common (1:7.5+8+squeeze1) ... invoke-rc.d: policy-rc.d denied execution of start. Selecting previously deselected package xtrans-dev. (Reading database ... 9242 files and directories currently installed.) Unpacking xtrans-dev (from .../xtrans-dev_1.2.5-1_all.deb) ... Selecting previously deselected package libpthread-stubs0. Unpacking libpthread-stubs0 (from .../libpthread-stubs0_0.3-2_amd64.deb) ... Selecting previously deselected package libpthread-stubs0-dev. Unpacking libpthread-stubs0-dev (from .../libpthread-stubs0-dev_0.3-2_amd64.deb) ... Selecting previously deselected package libxcb1-dev. Unpacking libxcb1-dev (from .../libxcb1-dev_1.6-1+squeeze1_amd64.deb) ... Selecting previously deselected package libx11-dev. Unpacking libx11-dev (from .../libx11-dev_2%3a1.3.3-4+squeeze1_amd64.deb) ... Selecting previously deselected package libcamd2.2.0. Unpacking libcamd2.2.0 (from .../libcamd2.2.0_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libbtf1.1.0. Unpacking libbtf1.1.0 (from .../libbtf1.1.0_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libcolamd2.7.1. Unpacking libcolamd2.7.1 (from .../libcolamd2.7.1_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libccolamd2.7.1. Unpacking libccolamd2.7.1 (from .../libccolamd2.7.1_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libcholmod1.7.1. Unpacking libcholmod1.7.1 (from .../libcholmod1.7.1_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libcsparse2.2.3. Unpacking libcsparse2.2.3 (from .../libcsparse2.2.3_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libcxsparse2.2.3. Unpacking libcxsparse2.2.3 (from .../libcxsparse2.2.3_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libklu1.1.0. Unpacking libklu1.1.0 (from .../libklu1.1.0_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libldl2.0.1. Unpacking libldl2.0.1 (from .../libldl2.0.1_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libsuitesparse-dev. Unpacking libsuitesparse-dev (from .../libsuitesparse-dev_1%3a3.4.0-2_amd64.deb) ... Selecting previously deselected package libsuperlu3-dev. Unpacking libsuperlu3-dev (from .../libsuperlu3-dev_3.0+20070106-3_amd64.deb) ... Selecting previously deselected package mpi-default-dev. Unpacking mpi-default-dev (from .../mpi-default-dev_0.6_amd64.deb) ... Selecting previously deselected package libspooles-dev. 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Selecting previously deselected package libpetsc3.1-dev. Unpacking libpetsc3.1-dev (from .../libpetsc3.1-dev_3.1.dfsg-7_amd64.deb) ... Selecting previously deselected package libarpack2-dev. Unpacking libarpack2-dev (from .../libarpack2-dev_2.1+parpack96.dfsg-3+b1_amd64.deb) ... Selecting previously deselected package libslepc3.0.0-dev. Unpacking libslepc3.0.0-dev (from .../libslepc3.0.0-dev_3.0.0-p7.dfsg-7.1_amd64.deb) ... Selecting previously deselected package libexpat1-dev. Unpacking libexpat1-dev (from .../libexpat1-dev_2.0.1-7+squeeze1_amd64.deb) ... Selecting previously deselected package libtrilinos-dev. Unpacking libtrilinos-dev (from .../libtrilinos-dev_10.0.4.dfsg-1.1+b1_amd64.deb) ... Selecting previously deselected package libscotchmetis-dev. Unpacking libscotchmetis-dev (from .../libscotchmetis-dev_5.1.8a.dfsg-2_amd64.deb) ... Selecting previously deselected package libgpg-error0. Unpacking libgpg-error0 (from .../libgpg-error0_1.6-1_amd64.deb) ... Selecting previously deselected package libgcrypt11. Unpacking libgcrypt11 (from .../libgcrypt11_1.4.5-2+squeeze1_amd64.deb) ... Selecting previously deselected package libtasn1-3. Unpacking libtasn1-3 (from .../libtasn1-3_2.7-1+squeeze+1_amd64.deb) ... Selecting previously deselected package libgnutls26. Unpacking libgnutls26 (from .../libgnutls26_2.8.6-1+squeeze2_amd64.deb) ... Selecting previously deselected package libkeyutils1. Unpacking libkeyutils1 (from .../libkeyutils1_1.4-1_amd64.deb) ... Selecting previously deselected package libkrb5support0. Unpacking libkrb5support0 (from .../libkrb5support0_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libk5crypto3. Unpacking libk5crypto3 (from .../libk5crypto3_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libkrb5-3. Unpacking libkrb5-3 (from .../libkrb5-3_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libgssapi-krb5-2. Unpacking libgssapi-krb5-2 (from .../libgssapi-krb5-2_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libidn11. Unpacking libidn11 (from .../libidn11_1.15-2_amd64.deb) ... Selecting previously deselected package libsasl2-2. Unpacking libsasl2-2 (from .../libsasl2-2_2.1.23.dfsg1-7_amd64.deb) ... Selecting previously deselected package libldap-2.4-2. Unpacking libldap-2.4-2 (from .../libldap-2.4-2_2.4.23-7.3_amd64.deb) ... Selecting previously deselected package libssl0.9.8. Unpacking libssl0.9.8 (from .../libssl0.9.8_0.9.8o-4squeeze14_amd64.deb) ... Selecting previously deselected package openssl. Unpacking openssl (from .../openssl_0.9.8o-4squeeze14_amd64.deb) ... Selecting previously deselected package ca-certificates. Unpacking ca-certificates (from .../ca-certificates_20090814+nmu3squeeze1_all.deb) ... Selecting previously deselected package libcurl3-gnutls. Unpacking libcurl3-gnutls (from .../libcurl3-gnutls_7.21.0-2.1+squeeze7_amd64.deb) ... Selecting previously deselected package libnetcdf6. Unpacking libnetcdf6 (from .../libnetcdf6_1%3a4.1.1-5_amd64.deb) ... Selecting previously deselected package libnetcdf-dev. Unpacking libnetcdf-dev (from .../libnetcdf-dev_1%3a4.1.1-5_amd64.deb) ... Selecting previously deselected package libicu44. Unpacking libicu44 (from .../libicu44_4.4.1-8+squeeze2_amd64.deb) ... Selecting previously deselected package g++-4.4. Unpacking g++-4.4 (from .../g++-4.4_4.4.5-8_amd64.deb) ... Selecting previously deselected package libstdc++6-4.4-dev. Unpacking libstdc++6-4.4-dev (from .../libstdc++6-4.4-dev_4.4.5-8_amd64.deb) ... Selecting previously deselected package libboost1.42-dev. Unpacking libboost1.42-dev (from .../libboost1.42-dev_1.42.0-4_amd64.deb) ... Selecting previously deselected package libboost-dev. Unpacking libboost-dev (from .../libboost-dev_1.42.0.1_amd64.deb) ... Selecting previously deselected package libtbb-dev. Unpacking libtbb-dev (from .../libtbb-dev_3.0+r035-1_amd64.deb) ... Setting up libgfortran3 (4.4.5-8) ... Setting up libibverbs1 (1.1.3-2) ... Setting up libnuma1 (2.0.5-1) ... Setting up libtorque2 (2.4.8+dfsg-9squeeze3) ... Setting up libopenmpi1.3 (1.4.2-4) ... Setting up libamd2.2.0 (1:3.4.0-2) ... Setting up libblas3gf (1.2-8) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up libhdf5-openmpi-1.8.4 (1.8.4-patch1-2) ... Setting up liblapack3gf (3.2.1-8) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up libsuperlu3 (3.0+20070106-3) ... Setting up libhypre-2.4.0 (2.4.0b-7) ... Setting up libscotch-5.1 (5.1.8a.dfsg-2) ... Setting up libspooles2.2 (2.2-8) ... Setting up libumfpack5.4.0 (1:3.4.0-2) ... Setting up libxau6 (1:1.0.6-1) ... Setting up libxdmcp6 (1:1.0.3-2) ... Setting up libxcb1 (1.6-1+squeeze1) ... Setting up libx11-data (2:1.3.3-4+squeeze1) ... Setting up libx11-6 (2:1.3.3-4+squeeze1) ... Setting up openmpi-common (1.4.2-4) ... Setting up openmpi-bin (1.4.2-4) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode. Setting up libpetsc3.1 (3.1.dfsg-7) ... Setting up libarpack2 (2.1+parpack96.dfsg-3+b1) ... Setting up libslepc3.0.0 (3.0.0-p7.dfsg-7.1) ... Setting up libtbb2 (3.0+r035-1) ... Setting up libexpat1 (2.0.1-7+squeeze1) ... Setting up libtrilinos (10.0.4.dfsg-1.1+b1) ... Setting up libdeal.ii6.3.1 (6.3.1-1) ... Setting up libblas-dev (1.2-8) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode. Setting up liblapack-dev (3.2.1-8) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode. Setting up libibverbs-dev (1.1.3-2) ... Setting up libopenmpi-dev (1.4.2-4) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode. Setting up libgmp3c2 (2:4.3.2+dfsg-1) ... Setting up libmpfr4 (3.0.0-2) ... Setting up cpp-4.4 (4.4.5-8) ... Setting up cpp (4:4.4.5-1) ... Setting up binutils (2.20.1-16) ... Setting up libgomp1 (4.4.5-8) ... Setting up gcc-4.4 (4.4.5-8) ... Setting up gcc (4:4.4.5-1) ... Setting up libc-dev-bin (2.11.3-4) ... Setting up linux-libc-dev (2.6.32-48squeeze4) ... Setting up libc6-dev (2.11.3-4) ... Setting up gfortran-4.4 (4.4.5-8) ... Setting up gfortran (4:4.4.5-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode. Setting up x11proto-core-dev (7.0.16-1) ... Setting up libxau-dev (1:1.0.6-1) ... Setting up libxdmcp-dev (1:1.0.3-2) ... Setting up x11proto-input-dev (2.0-2) ... Setting up x11proto-kb-dev (1.0.4-1) ... Setting up xtrans-dev (1.2.5-1) ... Setting up libpthread-stubs0 (0.3-2) ... Setting up libpthread-stubs0-dev (0.3-2) ... Setting up libxcb1-dev (1.6-1+squeeze1) ... Setting up libx11-dev (2:1.3.3-4+squeeze1) ... Setting up libcamd2.2.0 (1:3.4.0-2) ... Setting up libbtf1.1.0 (1:3.4.0-2) ... Setting up libcolamd2.7.1 (1:3.4.0-2) ... Setting up libccolamd2.7.1 (1:3.4.0-2) ... Setting up libcholmod1.7.1 (1:3.4.0-2) ... Setting up libcsparse2.2.3 (1:3.4.0-2) ... Setting up libcxsparse2.2.3 (1:3.4.0-2) ... Setting up libklu1.1.0 (1:3.4.0-2) ... Setting up libldl2.0.1 (1:3.4.0-2) ... Setting up libsuitesparse-dev (1:3.4.0-2) ... Setting up libsuperlu3-dev (3.0+20070106-3) ... Setting up mpi-default-dev (0.6) ... Setting up libspooles-dev (2.2-8) ... Setting up libhypre-dev (2.4.0b-7) ... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ... Setting up libscotch-dev (5.1.8a.dfsg-2) ... Setting up libjpeg62 (6b1-1) ... Setting up libjpeg62-dev (6b1-1) ... Setting up libhdf5-openmpi-dev (1.8.4-patch1-2) ... Setting up libhdf5-mpi-dev (1.8.4-patch1-2) ... Setting up libpetsc3.1-dev (3.1.dfsg-7) ... update-alternatives: using /usr/lib/petscdir/3.1 to provide /usr/lib/petsc (petsc) in auto mode. update-alternatives: using /usr/lib/petscdir/3.1/aclocal/math-blaslapack.m4 to provide /usr/share/aclocal/math-blaslapack.m4 (math-blaslapack.m4) in auto mode. Setting up libarpack2-dev (2.1+parpack96.dfsg-3+b1) ... Setting up libslepc3.0.0-dev (3.0.0-p7.dfsg-7.1) ... update-alternatives: using /usr/lib/slepcdir/3.0.0 to provide /usr/lib/slepc (slepc) in auto mode. Setting up libexpat1-dev (2.0.1-7+squeeze1) ... Setting up libtrilinos-dev (10.0.4.dfsg-1.1+b1) ... Setting up libscotchmetis-dev (5.1.8a.dfsg-2) ... Setting up libgpg-error0 (1.6-1) ... Setting up libgcrypt11 (1.4.5-2+squeeze1) ... Setting up libtasn1-3 (2.7-1+squeeze+1) ... Setting up libgnutls26 (2.8.6-1+squeeze2) ... Setting up libkeyutils1 (1.4-1) ... Setting up libkrb5support0 (1.8.3+dfsg-4squeeze7) ... Setting up libk5crypto3 (1.8.3+dfsg-4squeeze7) ... Setting up libkrb5-3 (1.8.3+dfsg-4squeeze7) ... Setting up libgssapi-krb5-2 (1.8.3+dfsg-4squeeze7) ... Setting up libidn11 (1.15-2) ... Setting up libsasl2-2 (2.1.23.dfsg1-7) ... Setting up libldap-2.4-2 (2.4.23-7.3) ... Setting up libssl0.9.8 (0.9.8o-4squeeze14) ... Setting up openssl (0.9.8o-4squeeze14) ... Setting up ca-certificates (20090814+nmu3squeeze1) ... Updating certificates in /etc/ssl/certs... WARNING: Skipping duplicate certificate brasil.gov.br.pem 140 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d....done. Setting up libcurl3-gnutls (7.21.0-2.1+squeeze7) ... Setting up libnetcdf6 (1:4.1.1-5) ... Setting up libnetcdf-dev (1:4.1.1-5) ... Setting up libicu44 (4.4.1-8+squeeze2) ... Setting up libtbb-dev (3.0+r035-1) ... Setting up g++-4.4 (4.4.5-8) ... Setting up libstdc++6-4.4-dev (4.4.5-8) ... Setting up libboost1.42-dev (1.42.0-4) ... Setting up libboost-dev (1.42.0.1) ... Setting up piuparts-depends-dummy (0.invalid.0) ... 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', '-yf', 'install'] 0m21.8s INFO: Installation of ['tmp/piuparts-depends-dummy.deb'] ok 0m21.8s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmp3x_mos/tmp/piuparts-depends-dummy.deb 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m21.9s DUMP: piuparts-depends-dummy install ok installed 0m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m21.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m21.9s DUMP: (Reading database ... 24107 files and directories currently installed.) Removing piuparts-depends-dummy ... 0m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m21.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'clean'] 0m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'clean'] 0m22.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m23.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m26.6s ERROR: WARN: Broken symlinks: /usr/share/doc/libsuperlu-dev/tests/MATGEN/slu_Cnames.h -> ../../SRC/slu_Cnames.h 0m26.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-cache', 'policy'] 0m26.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages release v=6.0.9,o=Debian,a=oldstable,n=squeeze,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-cache', 'policy'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-cache', 'policy', 'libdeal.ii-dev'] 0m26.7s DUMP: libdeal.ii-dev: Installed: (none) Candidate: 6.3.1-1 Version table: 6.3.1-1 0 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-cache', 'policy', 'libdeal.ii-dev'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', '-y', 'install', 'libdeal.ii-dev=6.3.1-1'] 0m28.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Suggested packages: libdeal.ii-dbg deal.ii-doc deal.ii-examples The following NEW packages will be installed: libdeal.ii-dev 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 1281 kB of archives. After this operation, 7938 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libdeal.ii-dev all 6.3.1-1 [1281 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1281 kB in 1s (879 kB/s) Selecting previously deselected package libdeal.ii-dev. (Reading database ... 24107 files and directories currently installed.) Unpacking libdeal.ii-dev (from .../libdeal.ii-dev_6.3.1-1_all.deb) ... Setting up libdeal.ii-dev (6.3.1-1) ... 0m28.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', '-y', 'install', 'libdeal.ii-dev=6.3.1-1'] 0m28.8s INFO: Running scripts post_install 0m28.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m29.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m32.7s ERROR: WARN: Broken symlinks: /usr/share/doc/libsuperlu-dev/tests/MATGEN/slu_Cnames.h -> ../../SRC/slu_Cnames.h 0m32.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--get-selections', '*'] 0m32.8s DUMP: adduser install apt install base-files install base-passwd install bash install binutils install bsdutils install ca-certificates install coreutils install cpp install cpp-4.4 install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install g++-4.4 install gcc install gcc-4.4 install gcc-4.4-base install gfortran install gfortran-4.4 install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libamd2.2.0 install libarpack2 install libarpack2-dev install libattr1 install libblas-dev install libblas3gf install libblkid1 install libboost-dev install libboost1.42-dev install libbtf1.1.0 install libbz2-1.0 install libc-bin install libc-dev-bin install libc6 install libc6-dev install libcamd2.2.0 install libccolamd2.7.1 install libcholmod1.7.1 install libcolamd2.7.1 install libcomerr2 install libcsparse2.2.3 install libcurl3-gnutls install libcxsparse2.2.3 install libdb4.8 install libdeal.ii-dev install libdeal.ii6.3.1 install libexpat1 install libexpat1-dev install libgcc1 install libgcrypt11 install libgfortran3 install libgmp3c2 install libgnutls26 install libgomp1 install libgpg-error0 install libgssapi-krb5-2 install libhdf5-mpi-dev install libhdf5-openmpi-1.8.4 install libhdf5-openmpi-dev install libhypre-2.4.0 install libhypre-dev install libibverbs-dev install libibverbs1 install libicu44 install libidn11 install libjpeg62 install libjpeg62-dev install libk5crypto3 install libkeyutils1 install libklu1.1.0 install libkrb5-3 install libkrb5support0 install liblapack-dev install liblapack3gf install libldap-2.4-2 install libldl2.0.1 install liblocale-gettext-perl install liblzma2 install libmpfr4 install libncurses5 install libnetcdf-dev install libnetcdf6 install libnuma1 install libopenmpi-dev install libopenmpi1.3 install libpam-modules install libpam-runtime install libpam0g install libpetsc3.1 install libpetsc3.1-dev install libpthread-stubs0 install libpthread-stubs0-dev install libreadline6 install libsasl2-2 install libscotch-5.1 install libscotch-dev install libscotchmetis-dev install libselinux1 install libsepol1 install libslang2 install libslepc3.0.0 install libslepc3.0.0-dev install libspooles-dev install libspooles2.2 install libss2 install libssl0.9.8 install libstdc++6 install libstdc++6-4.4-dev install libsuitesparse-dev install libsuperlu3 install libsuperlu3-dev install libtasn1-3 install libtbb-dev install libtbb2 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libtorque2 install libtrilinos install libtrilinos-dev install libumfpack5.4.0 install libusb-0.1-4 install libuuid1 install libx11-6 install libx11-data install libx11-dev install libxau-dev install libxau6 install libxcb1 install libxcb1-dev install libxdmcp-dev install libxdmcp6 install linux-libc-dev install login install lsb-base install mawk install mount install mpi-default-dev install ncurses-base install ncurses-bin install openmpi-bin install openmpi-common install openssl install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install x11-common install x11proto-core-dev install x11proto-input-dev install x11proto-kb-dev install xtrans-dev install xz-utils install zlib1g install zlib1g-dev install 0m32.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--get-selections', '*'] 0m35.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp3x_mos', '-ac'] 0m38.0s DUMP: debsums: no md5sums for binutils debsums: no md5sums for gfortran debsums: no md5sums for mawk 0m38.0s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp3x_mos', '-ac'] 0m38.0s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m38.0s DUMP: 0.11.3~bpo70+1 0m38.0s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m38.0s INFO: Running adequate version 0.11.3~bpo70+1 now. 0m38.0s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'libdeal.ii-dev'] 0m38.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'libdeal.ii-dev'] 0m38.1s INFO: Running scripts pre_remove 0m38.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m38.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m38.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m38.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m38.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m38.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m38.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m38.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m38.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_exceptions'] 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/pre_remove_exceptions'] 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'remove', 'libamd2.2.0', 'libboost1.42-dev', 'libsuitesparse-dev', 'liblapack-dev', 'libsuperlu3-dev', 'libklu1.1.0', 'libxdmcp-dev', 'libxau6', 'libx11-dev', 'libkeyutils1', 'libopenmpi-dev', 'libtrilinos', 'libxau-dev', 'libjpeg62', 'libjpeg62-dev', 'ca-certificates', 'libtorque2', 'gfortran', 'libgpg-error0', 'libscotch-5.1', 'x11proto-input-dev', 'libcolamd2.7.1', 'libdeal.ii6.3.1', 'libarpack2', 'libhdf5-openmpi-1.8.4', 'g++-4.4', 'libgomp1', 'libsuperlu3', 'libk5crypto3', 'libidn11', 'openmpi-common', 'libnetcdf-dev', 'libumfpack5.4.0', 'linux-libc-dev', 'libslepc3.0.0', 'libnuma1', 'libhypre-2.4.0', 'libbtf1.1.0', 'libkrb5-3', 'libhdf5-openmpi-dev', 'libccolamd2.7.1', 'libhypre-dev', 'libtasn1-3', 'libtrilinos-dev', 'libscotchmetis-dev', 'openssl', 'libxcb1-dev', 'libnetcdf6', 'libcholmod1.7.1', 'libslepc3.0.0-dev', 'libpthread-stubs0-dev', 'binutils', 'libxcb1', 'libldl2.0.1', 'cpp-4.4', 'libspooles-dev', 'libgcrypt11', 'libtbb-dev', 'libldap-2.4-2', 'libgmp3c2', 'libgfortran3', 'x11-common', 'gfortran-4.4', 'libssl0.9.8', 'libpthread-stubs0', 'mpi-default-dev', 'libpetsc3.1', 'xtrans-dev', 'libgssapi-krb5-2', 'libcurl3-gnutls', 'libarpack2-dev', 'libicu44', 'gcc-4.4', 'libscotch-dev', 'libpetsc3.1-dev', 'libgnutls26', 'libcamd2.2.0', 'libxdmcp6', 'libx11-data', 'libx11-6', 'libmpfr4', 'libopenmpi1.3', 'libcsparse2.2.3', 'x11proto-core-dev', 'libhdf5-mpi-dev', 'libkrb5support0', 'libsasl2-2', 'gcc', 'libblas3gf', 'libcxsparse2.2.3', 'libboost-dev', 'libtbb2', 'libibverbs1', 'openmpi-bin', 'libspooles2.2', 'libc6-dev', 'libblas-dev', 'liblapack3gf', 'zlib1g-dev', 'libstdc++6-4.4-dev', 'x11proto-kb-dev', 'libibverbs-dev', 'libexpat1-dev', 'libc-dev-bin', 'cpp', 'libexpat1', 'libdeal.ii-dev'] 0m40.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: binutils ca-certificates cpp cpp-4.4 g++-4.4 gcc gcc-4.4 gfortran gfortran-4.4 libamd2.2.0 libarpack2 libarpack2-dev libblas-dev libblas3gf libboost-dev libboost1.42-dev libbtf1.1.0 libc-dev-bin libc6-dev libcamd2.2.0 libccolamd2.7.1 libcholmod1.7.1 libcolamd2.7.1 libcsparse2.2.3 libcurl3-gnutls libcxsparse2.2.3 libdeal.ii-dev libdeal.ii6.3.1 libexpat1 libexpat1-dev libgcrypt11 libgfortran3 libgmp3c2 libgnutls26 libgomp1 libgpg-error0 libgssapi-krb5-2 libhdf5-mpi-dev libhdf5-openmpi-1.8.4 libhdf5-openmpi-dev libhypre-2.4.0 libhypre-dev libibverbs-dev libibverbs1 libicu44 libidn11 libjpeg62 libjpeg62-dev libk5crypto3 libkeyutils1 libklu1.1.0 libkrb5-3 libkrb5support0 liblapack-dev liblapack3gf libldap-2.4-2 libldl2.0.1 libmpfr4 libnetcdf-dev libnetcdf6 libnuma1 libopenmpi-dev libopenmpi1.3 libpetsc3.1 libpetsc3.1-dev libpthread-stubs0 libpthread-stubs0-dev libsasl2-2 libscotch-5.1 libscotch-dev libscotchmetis-dev libslepc3.0.0 libslepc3.0.0-dev libspooles-dev libspooles2.2 libssl0.9.8 libstdc++6-4.4-dev libsuitesparse-dev libsuperlu3 libsuperlu3-dev libtasn1-3 libtbb-dev libtbb2 libtorque2 libtrilinos libtrilinos-dev libumfpack5.4.0 libx11-6 libx11-data libx11-dev libxau-dev libxau6 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 linux-libc-dev mpi-default-dev openmpi-bin openmpi-common openssl x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev xtrans-dev zlib1g-dev 0 upgraded, 0 newly installed, 107 to remove and 0 not upgraded. After this operation, 554 MB disk space will be freed. (Reading database ... 24446 files and directories currently installed.) Removing libdeal.ii-dev ... Removing libslepc3.0.0-dev ... Removing libpetsc3.1-dev ... Removing gfortran ... Removing gcc ... Removing gfortran-4.4 ... Removing libboost-dev ... Removing libboost1.42-dev ... Removing libnetcdf-dev ... Removing libnetcdf6 ... Removing libcurl3-gnutls ... Removing ca-certificates ... Removing dangling symlinks from /etc/ssl/certs... done. Removing cpp ... Removing libsuitesparse-dev ... Removing libdeal.ii6.3.1 ... Removing libslepc3.0.0 ... Removing libpetsc3.1 ... Removing libumfpack5.4.0 ... Removing libklu1.1.0 ... Removing libcholmod1.7.1 ... Removing libamd2.2.0 ... Removing libarpack2-dev ... Removing libarpack2 ... Removing libhypre-dev ... Removing libsuperlu3-dev ... Removing liblapack-dev ... Removing libblas-dev ... Removing libtrilinos-dev ... Removing libtrilinos ... Removing libhypre-2.4.0 ... Removing libsuperlu3 ... Removing liblapack3gf ... Removing libblas3gf ... Removing libbtf1.1.0 ... Removing libscotchmetis-dev ... Removing libscotch-dev ... Removing libhdf5-mpi-dev ... Removing libhdf5-openmpi-dev ... Removing zlib1g-dev ... Removing libexpat1-dev ... Removing libjpeg62-dev ... Removing libcamd2.2.0 ... Removing libccolamd2.7.1 ... Removing libcolamd2.7.1 ... Removing libcsparse2.2.3 ... Removing libcxsparse2.2.3 ... Removing libexpat1 ... Removing libldap-2.4-2 ... Removing libgnutls26 ... Removing libgcrypt11 ... Removing libspooles-dev ... Removing libspooles2.2 ... Removing openmpi-bin ... Removing mpi-default-dev ... Removing libopenmpi-dev ... Removing libhdf5-openmpi-1.8.4 ... Removing libopenmpi1.3 ... Removing libgfortran3 ... Removing libgpg-error0 ... Removing libgssapi-krb5-2 ... Removing libibverbs-dev ... Removing libibverbs1 ... Removing libicu44 ... Removing libidn11 ... Removing libjpeg62 ... Removing libkrb5-3 ... Removing libk5crypto3 ... Removing libkrb5support0 ... Removing libkeyutils1 ... Removing libldl2.0.1 ... Removing libnuma1 ... Removing libx11-dev ... Removing libxcb1-dev ... Removing libpthread-stubs0-dev ... Removing libpthread-stubs0 ... Removing libsasl2-2 ... Removing libscotch-5.1 ... Removing openssl ... Removing libssl0.9.8 ... Removing libtasn1-3 ... Removing libtbb-dev ... Removing libtbb2 ... Removing libtorque2 ... Removing libx11-6 ... Removing libx11-data ... Removing libxau-dev ... Removing libxcb1 ... Removing libxau6 ... Removing libxdmcp-dev ... Removing libxdmcp6 ... Removing openmpi-common ... Removing xtrans-dev ... Removing x11-common ... invoke-rc.d: policy-rc.d denied execution of stop. Removing x11proto-input-dev ... Removing x11proto-core-dev ... Removing x11proto-kb-dev ... Removing g++-4.4 ... Removing libstdc++6-4.4-dev ... Removing gcc-4.4 ... Removing binutils ... Removing cpp-4.4 ... Removing libc6-dev ... Removing libc-dev-bin ... Removing libmpfr4 ... Removing libgmp3c2 ... Removing libgomp1 ... Removing linux-libc-dev ... 0m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'remove', 'libamd2.2.0', 'libboost1.42-dev', 'libsuitesparse-dev', 'liblapack-dev', 'libsuperlu3-dev', 'libklu1.1.0', 'libxdmcp-dev', 'libxau6', 'libx11-dev', 'libkeyutils1', 'libopenmpi-dev', 'libtrilinos', 'libxau-dev', 'libjpeg62', 'libjpeg62-dev', 'ca-certificates', 'libtorque2', 'gfortran', 'libgpg-error0', 'libscotch-5.1', 'x11proto-input-dev', 'libcolamd2.7.1', 'libdeal.ii6.3.1', 'libarpack2', 'libhdf5-openmpi-1.8.4', 'g++-4.4', 'libgomp1', 'libsuperlu3', 'libk5crypto3', 'libidn11', 'openmpi-common', 'libnetcdf-dev', 'libumfpack5.4.0', 'linux-libc-dev', 'libslepc3.0.0', 'libnuma1', 'libhypre-2.4.0', 'libbtf1.1.0', 'libkrb5-3', 'libhdf5-openmpi-dev', 'libccolamd2.7.1', 'libhypre-dev', 'libtasn1-3', 'libtrilinos-dev', 'libscotchmetis-dev', 'openssl', 'libxcb1-dev', 'libnetcdf6', 'libcholmod1.7.1', 'libslepc3.0.0-dev', 'libpthread-stubs0-dev', 'binutils', 'libxcb1', 'libldl2.0.1', 'cpp-4.4', 'libspooles-dev', 'libgcrypt11', 'libtbb-dev', 'libldap-2.4-2', 'libgmp3c2', 'libgfortran3', 'x11-common', 'gfortran-4.4', 'libssl0.9.8', 'libpthread-stubs0', 'mpi-default-dev', 'libpetsc3.1', 'xtrans-dev', 'libgssapi-krb5-2', 'libcurl3-gnutls', 'libarpack2-dev', 'libicu44', 'gcc-4.4', 'libscotch-dev', 'libpetsc3.1-dev', 'libgnutls26', 'libcamd2.2.0', 'libxdmcp6', 'libx11-data', 'libx11-6', 'libmpfr4', 'libopenmpi1.3', 'libcsparse2.2.3', 'x11proto-core-dev', 'libhdf5-mpi-dev', 'libkrb5support0', 'libsasl2-2', 'gcc', 'libblas3gf', 'libcxsparse2.2.3', 'libboost-dev', 'libtbb2', 'libibverbs1', 'openmpi-bin', 'libspooles2.2', 'libc6-dev', 'libblas-dev', 'liblapack3gf', 'zlib1g-dev', 'libstdc++6-4.4-dev', 'x11proto-kb-dev', 'libibverbs-dev', 'libexpat1-dev', 'libc-dev-bin', 'cpp', 'libexpat1', 'libdeal.ii-dev'] 0m40.5s INFO: Running scripts post_remove 0m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_remove_exceptions_lenny'] 0m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_remove_exceptions_lenny'] 0m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_remove_extras'] 0m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_remove_extras'] 0m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--purge', 'libamd2.2.0', 'libboost1.42-dev', 'libsuitesparse-dev', 'liblapack-dev', 'libsuperlu3-dev', 'libklu1.1.0', 'libxdmcp-dev', 'libxau6', 'libx11-dev', 'libkeyutils1', 'libopenmpi-dev', 'libtrilinos', 'libxau-dev', 'libjpeg62', 'libjpeg62-dev', 'ca-certificates', 'libtorque2', 'gfortran', 'libgpg-error0', 'libscotch-5.1', 'x11proto-input-dev', 'libcolamd2.7.1', 'libdeal.ii6.3.1', 'libarpack2', 'libhdf5-openmpi-1.8.4', 'g++-4.4', 'libgomp1', 'libsuperlu3', 'libk5crypto3', 'libidn11', 'openmpi-common', 'libnetcdf-dev', 'libumfpack5.4.0', 'linux-libc-dev', 'libslepc3.0.0', 'libnuma1', 'libhypre-2.4.0', 'libbtf1.1.0', 'libkrb5-3', 'libhdf5-openmpi-dev', 'libccolamd2.7.1', 'libhypre-dev', 'libtasn1-3', 'libtrilinos-dev', 'libscotchmetis-dev', 'openssl', 'libxcb1-dev', 'libnetcdf6', 'libcholmod1.7.1', 'libslepc3.0.0-dev', 'libpthread-stubs0-dev', 'binutils', 'libxcb1', 'libldl2.0.1', 'cpp-4.4', 'libspooles-dev', 'libgcrypt11', 'libtbb-dev', 'libldap-2.4-2', 'libgmp3c2', 'libgfortran3', 'x11-common', 'gfortran-4.4', 'libssl0.9.8', 'libpthread-stubs0', 'mpi-default-dev', 'libpetsc3.1', 'xtrans-dev', 'libgssapi-krb5-2', 'libcurl3-gnutls', 'libarpack2-dev', 'libicu44', 'gcc-4.4', 'libscotch-dev', 'libpetsc3.1-dev', 'libgnutls26', 'libcamd2.2.0', 'libxdmcp6', 'libx11-data', 'libx11-6', 'libmpfr4', 'libopenmpi1.3', 'libcsparse2.2.3', 'x11proto-core-dev', 'libhdf5-mpi-dev', 'libkrb5support0', 'libsasl2-2', 'gcc', 'libblas3gf', 'libcxsparse2.2.3', 'libboost-dev', 'libtbb2', 'libibverbs1', 'openmpi-bin', 'libspooles2.2', 'libc6-dev', 'libblas-dev', 'liblapack3gf', 'zlib1g-dev', 'libstdc++6-4.4-dev', 'x11proto-kb-dev', 'libibverbs-dev', 'libexpat1-dev', 'libc-dev-bin', 'cpp', 'libexpat1'] 0m41.4s DUMP: (Reading database ... 6284 files and directories currently installed.) Removing libamd2.2.0 ... Purging configuration files for libamd2.2.0 ... dpkg: warning: ignoring request to remove libboost1.42-dev which isn't installed. dpkg: warning: ignoring request to remove libsuitesparse-dev which isn't installed. dpkg: warning: ignoring request to remove liblapack-dev which isn't installed. dpkg: warning: ignoring request to remove libsuperlu3-dev which isn't installed. Removing libklu1.1.0 ... Purging configuration files for libklu1.1.0 ... dpkg: warning: ignoring request to remove libxdmcp-dev which isn't installed. Removing libxau6 ... Purging configuration files for libxau6 ... dpkg: warning: ignoring request to remove libx11-dev which isn't installed. Removing libkeyutils1 ... Purging configuration files for libkeyutils1 ... dpkg: warning: ignoring request to remove libopenmpi-dev which isn't installed. Removing libtrilinos ... Purging configuration files for libtrilinos ... dpkg: warning: ignoring request to remove libxau-dev which isn't installed. dpkg: warning: ignoring request to remove libjpeg62 which isn't installed. dpkg: warning: ignoring request to remove libjpeg62-dev which isn't installed. Removing ca-certificates ... Purging configuration files for ca-certificates ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libtorque2 ... Purging configuration files for libtorque2 ... dpkg: warning: ignoring request to remove gfortran which isn't installed. Removing libgpg-error0 ... Purging configuration files for libgpg-error0 ... Removing libscotch-5.1 ... Purging configuration files for libscotch-5.1 ... dpkg: warning: ignoring request to remove x11proto-input-dev which isn't installed. Removing libcolamd2.7.1 ... Purging configuration files for libcolamd2.7.1 ... Removing libdeal.ii6.3.1 ... Purging configuration files for libdeal.ii6.3.1 ... Removing libarpack2 ... Purging configuration files for libarpack2 ... Removing libhdf5-openmpi-1.8.4 ... Purging configuration files for libhdf5-openmpi-1.8.4 ... dpkg: warning: ignoring request to remove g++-4.4 which isn't installed. Removing libgomp1 ... Purging configuration files for libgomp1 ... Removing libsuperlu3 ... Purging configuration files for libsuperlu3 ... Removing libk5crypto3 ... Purging configuration files for libk5crypto3 ... Removing libidn11 ... Purging configuration files for libidn11 ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed. dpkg: warning: ignoring request to remove libnetcdf-dev which isn't installed. Removing libumfpack5.4.0 ... Purging configuration files for libumfpack5.4.0 ... dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed. Removing libslepc3.0.0 ... Purging configuration files for libslepc3.0.0 ... Removing libnuma1 ... Purging configuration files for libnuma1 ... Removing libhypre-2.4.0 ... Purging configuration files for libhypre-2.4.0 ... Removing libbtf1.1.0 ... Purging configuration files for libbtf1.1.0 ... Removing libkrb5-3 ... Purging configuration files for libkrb5-3 ... dpkg: warning: ignoring request to remove libhdf5-openmpi-dev which isn't installed. Removing libccolamd2.7.1 ... Purging configuration files for libccolamd2.7.1 ... dpkg: warning: ignoring request to remove libhypre-dev which isn't installed. Removing libtasn1-3 ... Purging configuration files for libtasn1-3 ... dpkg: warning: ignoring request to remove libtrilinos-dev which isn't installed. dpkg: warning: ignoring request to remove libscotchmetis-dev which isn't installed. Removing openssl ... Purging configuration files for openssl ... dpkg: warning: ignoring request to remove libxcb1-dev which isn't installed. Removing libnetcdf6 ... Purging configuration files for libnetcdf6 ... Removing libcholmod1.7.1 ... Purging configuration files for libcholmod1.7.1 ... dpkg: warning: ignoring request to remove libslepc3.0.0-dev which isn't installed. dpkg: warning: ignoring request to remove libpthread-stubs0-dev which isn't installed. Removing binutils ... Purging configuration files for binutils ... Removing libxcb1 ... Purging configuration files for libxcb1 ... Removing libldl2.0.1 ... Purging configuration files for libldl2.0.1 ... dpkg: warning: ignoring request to remove cpp-4.4 which isn't installed. dpkg: warning: ignoring request to remove libspooles-dev which isn't installed. Removing libgcrypt11 ... Purging configuration files for libgcrypt11 ... dpkg: warning: ignoring request to remove libtbb-dev which isn't installed. Removing libldap-2.4-2 ... Purging configuration files for libldap-2.4-2 ... Removing libgmp3c2 ... Purging configuration files for libgmp3c2 ... Removing libgfortran3 ... Purging configuration files for libgfortran3 ... Removing x11-common ... Purging configuration files for x11-common ... dpkg: warning: ignoring request to remove gfortran-4.4 which isn't installed. Removing libssl0.9.8 ... Purging configuration files for libssl0.9.8 ... dpkg: warning: ignoring request to remove libpthread-stubs0 which isn't installed. dpkg: warning: ignoring request to remove mpi-default-dev which isn't installed. Removing libpetsc3.1 ... Purging configuration files for libpetsc3.1 ... dpkg: warning: ignoring request to remove xtrans-dev which isn't installed. Removing libgssapi-krb5-2 ... Purging configuration files for libgssapi-krb5-2 ... Removing libcurl3-gnutls ... Purging configuration files for libcurl3-gnutls ... dpkg: warning: ignoring request to remove libarpack2-dev which isn't installed. Removing libicu44 ... Purging configuration files for libicu44 ... dpkg: warning: ignoring request to remove gcc-4.4 which isn't installed. dpkg: warning: ignoring request to remove libscotch-dev which isn't installed. dpkg: warning: ignoring request to remove libpetsc3.1-dev which isn't installed. Removing libgnutls26 ... Purging configuration files for libgnutls26 ... Removing libcamd2.2.0 ... Purging configuration files for libcamd2.2.0 ... Removing libxdmcp6 ... Purging configuration files for libxdmcp6 ... dpkg: warning: ignoring request to remove libx11-data which isn't installed. Removing libx11-6 ... Purging configuration files for libx11-6 ... Removing libmpfr4 ... Purging configuration files for libmpfr4 ... Removing libopenmpi1.3 ... Purging configuration files for libopenmpi1.3 ... Removing libcsparse2.2.3 ... Purging configuration files for libcsparse2.2.3 ... dpkg: warning: ignoring request to remove x11proto-core-dev which isn't installed. dpkg: warning: ignoring request to remove libhdf5-mpi-dev which isn't installed. Removing libkrb5support0 ... Purging configuration files for libkrb5support0 ... Removing libsasl2-2 ... Purging configuration files for libsasl2-2 ... dpkg: warning: ignoring request to remove gcc which isn't installed. Removing libblas3gf ... Purging configuration files for libblas3gf ... Removing libcxsparse2.2.3 ... Purging configuration files for libcxsparse2.2.3 ... dpkg: warning: ignoring request to remove libboost-dev which isn't installed. Removing libtbb2 ... Purging configuration files for libtbb2 ... Removing libibverbs1 ... Purging configuration files for libibverbs1 ... Removing openmpi-bin ... Purging configuration files for openmpi-bin ... Removing libspooles2.2 ... Purging configuration files for libspooles2.2 ... dpkg: warning: ignoring request to remove libc6-dev which isn't installed. dpkg: warning: ignoring request to remove libblas-dev which isn't installed. Removing liblapack3gf ... Purging configuration files for liblapack3gf ... dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed. dpkg: warning: ignoring request to remove libstdc++6-4.4-dev which isn't installed. dpkg: warning: ignoring request to remove x11proto-kb-dev which isn't installed. dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed. dpkg: warning: ignoring request to remove libexpat1-dev which isn't installed. dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed. dpkg: warning: ignoring request to remove cpp which isn't installed. Removing libexpat1 ... Purging configuration files for libexpat1 ... 0m41.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--purge', 'libamd2.2.0', 'libboost1.42-dev', 'libsuitesparse-dev', 'liblapack-dev', 'libsuperlu3-dev', 'libklu1.1.0', 'libxdmcp-dev', 'libxau6', 'libx11-dev', 'libkeyutils1', 'libopenmpi-dev', 'libtrilinos', 'libxau-dev', 'libjpeg62', 'libjpeg62-dev', 'ca-certificates', 'libtorque2', 'gfortran', 'libgpg-error0', 'libscotch-5.1', 'x11proto-input-dev', 'libcolamd2.7.1', 'libdeal.ii6.3.1', 'libarpack2', 'libhdf5-openmpi-1.8.4', 'g++-4.4', 'libgomp1', 'libsuperlu3', 'libk5crypto3', 'libidn11', 'openmpi-common', 'libnetcdf-dev', 'libumfpack5.4.0', 'linux-libc-dev', 'libslepc3.0.0', 'libnuma1', 'libhypre-2.4.0', 'libbtf1.1.0', 'libkrb5-3', 'libhdf5-openmpi-dev', 'libccolamd2.7.1', 'libhypre-dev', 'libtasn1-3', 'libtrilinos-dev', 'libscotchmetis-dev', 'openssl', 'libxcb1-dev', 'libnetcdf6', 'libcholmod1.7.1', 'libslepc3.0.0-dev', 'libpthread-stubs0-dev', 'binutils', 'libxcb1', 'libldl2.0.1', 'cpp-4.4', 'libspooles-dev', 'libgcrypt11', 'libtbb-dev', 'libldap-2.4-2', 'libgmp3c2', 'libgfortran3', 'x11-common', 'gfortran-4.4', 'libssl0.9.8', 'libpthread-stubs0', 'mpi-default-dev', 'libpetsc3.1', 'xtrans-dev', 'libgssapi-krb5-2', 'libcurl3-gnutls', 'libarpack2-dev', 'libicu44', 'gcc-4.4', 'libscotch-dev', 'libpetsc3.1-dev', 'libgnutls26', 'libcamd2.2.0', 'libxdmcp6', 'libx11-data', 'libx11-6', 'libmpfr4', 'libopenmpi1.3', 'libcsparse2.2.3', 'x11proto-core-dev', 'libhdf5-mpi-dev', 'libkrb5support0', 'libsasl2-2', 'gcc', 'libblas3gf', 'libcxsparse2.2.3', 'libboost-dev', 'libtbb2', 'libibverbs1', 'openmpi-bin', 'libspooles2.2', 'libc6-dev', 'libblas-dev', 'liblapack3gf', 'zlib1g-dev', 'libstdc++6-4.4-dev', 'x11proto-kb-dev', 'libibverbs-dev', 'libexpat1-dev', 'libc-dev-bin', 'cpp', 'libexpat1'] 0m41.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--purge', 'libdeal.ii-dev'] 0m41.4s DUMP: dpkg: warning: ignoring request to remove libdeal.ii-dev which isn't installed. 0m41.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--purge', 'libdeal.ii-dev'] 0m41.4s INFO: Running scripts post_purge 0m41.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_purge_exceptions'] 0m41.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'tmp/scripts/post_purge_exceptions'] 0m41.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--purge', '--pending'] 0m41.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--purge', '--pending'] 0m41.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--remove', '--pending'] 0m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg', '--remove', '--pending'] 0m41.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m41.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m42.5s ERROR: WARN: Broken symlinks: /usr/lib/liblapack.a -> /etc/alternatives/liblapack.a /usr/lib/liblapack.so -> /etc/alternatives/liblapack.so /etc/alternatives/liblapack.a -> /usr/lib/lapack/liblapack.a /etc/alternatives/liblapack.so -> /usr/lib/lapack/liblapack.so /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf 0m42.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg-divert', '--list'] 0m42.6s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'dpkg-divert', '--list'] 0m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'clean'] 0m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'apt-get', 'clean'] 0m44.0s INFO: Warning: Package purging left files on system: /etc/alternatives/liblapack.a -> /usr/lib/lapack/liblapack.a not owned /etc/alternatives/liblapack.so -> /usr/lib/lapack/liblapack.so not owned /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf not owned /usr/lib/liblapack.a -> /etc/alternatives/liblapack.a not owned /usr/lib/liblapack.so -> /etc/alternatives/liblapack.so not owned These files seem to have been left by dependencies rather than by packages being explicitly tested. 0m44.1s INFO: PASS: Installation and purging test. 0m44.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'umount', '/proc'] 0m44.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp3x_mos', 'umount', '/proc'] 0m44.4s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m44.5s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp3x_mos'] 0m44.5s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp3x_mos 0m44.5s INFO: PASS: All tests. 0m44.5s INFO: piuparts run ends. ret=0 End: 2014-04-21 17:35:38 UTC