Start: 2014-02-18 19:49:49 UTC Package: libghemical-dev Priority: optional Section: libdevel Installed-Size: 2608 Maintainer: Debichem Team Architecture: amd64 Source: libghemical Version: 2.99.1-1 Depends: libghemical5 (= 2.99.1-1), libmopac7-dev Filename: pool/main/libg/libghemical/libghemical-dev_2.99.1-1_amd64.deb Size: 660616 MD5sum: 17ecc24dc4c0a8035efdad95ecc8250a SHA1: eaf027f92dea3486fd8ed7fb85e8d6307e89fc36 SHA256: c98500aeddce44ed86f1366d1b7ddc7568d2360dae943403753bb33f8de98985 Description: Molecular Modelling Library (development files) Libghemical is the basis of Ghemical, a GNOME Molecular Modelling Application. . This package includes the static library and the header files. Homepage: http://bioinformatics.org/ghemical/ghemical/ Tag: devel::lang:c++, devel::library, implemented-in::c++, role::devel-lib, uitoolkit::gtk Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 35m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt libghemical-dev=2.99.1-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at http://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.57.1~201402172317~0.57-12-g4a108e2 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt libghemical-dev=2.99.1-1 0m0.0s INFO: Running on: Linux piu-slave-bm-a 3.2.0-4-amd64 #1 SMP Debian 3.2.54-2 x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpgyGiXf 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpgyGiXf 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.8s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ squeeze main 0m1.8s DEBUG: Created policy-rc.d and chmodded it. 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'update'] 0m3.4s DUMP: Get:1 http://mirror.bm.debian.org squeeze Release.gpg [1672 B] Ign http://mirror.bm.debian.org/debian/ squeeze/main Translation-en Get:2 http://mirror.bm.debian.org squeeze Release [96.0 kB] Get:3 http://mirror.bm.debian.org squeeze/main amd64 Packages [8388 kB] Fetched 8486 kB in 0s (9315 kB/s) Reading package lists... 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'update'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', '-yf', 'dist-upgrade'] 0m4.5s DUMP: Reading package lists... Building dependency tree... The following packages will be upgraded: base-files gnupg gpgv tzdata 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 3067 kB of archives. After this operation, 52.2 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main base-files amd64 6.0squeeze9 [76.1 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main gpgv amd64 1.4.10-4+squeeze4 [222 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main gnupg amd64 1.4.10-4+squeeze4 [2148 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main tzdata all 2013i-0squeeze1 [621 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3067 kB in 0s (38.7 MB/s) (Reading database ... 6155 files and directories currently installed.) Preparing to replace base-files 6.0squeeze8 (using .../base-files_6.0squeeze9_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.0squeeze9) ... Installing new version of config file /etc/debian_version ... (Reading database ... 6155 files and directories currently installed.) Preparing to replace gpgv 1.4.10-4+squeeze3 (using .../gpgv_1.4.10-4+squeeze4_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.10-4+squeeze4) ... (Reading database ... 6155 files and directories currently installed.) Preparing to replace gnupg 1.4.10-4+squeeze3 (using .../gnupg_1.4.10-4+squeeze4_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.10-4+squeeze4) ... (Reading database ... 6155 files and directories currently installed.) Preparing to replace tzdata 2013d-0squeeze1 (using .../tzdata_2013i-0squeeze1_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2013i-0squeeze1) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Feb 18 19:49:53 UTC 2014. Universal Time is now: Tue Feb 18 19:49:53 UTC 2014. Run 'dpkg-reconfigure tzdata' if you wish to change it. 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', '-yf', 'dist-upgrade'] 0m4.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpgyGiXf/tmp/scripts/ 0m4.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts-squeeze to /srv/piuparts.debian.org/tmp/tmpgyGiXf/tmp/scripts/ 0m4.5s INFO: Running scripts post_setup 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_experimental'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_experimental'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_forbid_home'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_forbid_home'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.6s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' `/bin/sync' -> `true' 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m5.4s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Reading state information... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (25.9 MB/s) Selecting previously deselected package adduser. (Reading database ... 6135 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'clean'] 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'clean'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--get-selections', '*'] 0m5.9s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install liblocale-gettext-perl install liblzma2 install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install ncurses-base install ncurses-bin install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--get-selections', '*'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg-divert', '--list'] 0m5.9s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg-divert', '--list'] 0m5.9s INFO: apt-cache does not know about any of the requested packages 0m5.9s INFO: Running scripts pre_test 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_test_root_password'] 0m5.9s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_test_root_password'] 0m5.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m6.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m6.9s DEBUG: No broken symlinks as far as we can find. 0m6.9s INFO: Running scripts pre_install 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_install_database-server'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_install_database-server'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_install_exceptions'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_install_exceptions'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_install_extras'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_install_extras'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-cache', 'show', 'libghemical-dev=2.99.1-1'] 0m7.1s DUMP: Package: libghemical-dev Priority: optional Section: libdevel Installed-Size: 2608 Maintainer: Debichem Team Architecture: amd64 Source: libghemical Version: 2.99.1-1 Depends: libghemical5 (= 2.99.1-1), libmopac7-dev Filename: pool/main/libg/libghemical/libghemical-dev_2.99.1-1_amd64.deb Size: 660616 MD5sum: 17ecc24dc4c0a8035efdad95ecc8250a SHA1: eaf027f92dea3486fd8ed7fb85e8d6307e89fc36 SHA256: c98500aeddce44ed86f1366d1b7ddc7568d2360dae943403753bb33f8de98985 Description: Molecular Modelling Library (development files) Libghemical is the basis of Ghemical, a GNOME Molecular Modelling Application. . This package includes the static library and the header files. Homepage: http://bioinformatics.org/ghemical/ghemical/ Tag: devel::lang:c++, devel::library, implemented-in::c++, role::devel-lib, uitoolkit::gtk 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-cache', 'show', 'libghemical-dev=2.99.1-1'] 0m7.1s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed Depends: libghemical5 (= 2.99.1-1), libmopac7-dev 0m7.1s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpXGQlVQ/piuparts-depends-dummy'] 0m7.1s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmpXGQlVQ/piuparts-depends-dummy.deb'. 0m7.1s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpXGQlVQ/piuparts-depends-dummy'] 0m7.1s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmpXGQlVQ/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmpgyGiXf/tmp 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m7.1s DUMP: Selecting previously deselected package piuparts-depends-dummy. (Reading database ... 6258 files and directories currently installed.) Unpacking piuparts-depends-dummy (from tmp/piuparts-depends-dummy.deb) ... dpkg: dependency problems prevent configuration of piuparts-depends-dummy: piuparts-depends-dummy depends on libghemical5 (= 2.99.1-1); however: Package libghemical5 is not installed. piuparts-depends-dummy depends on libmopac7-dev; however: Package libmopac7-dev is not installed. dpkg: error processing piuparts-depends-dummy (--install): dependency problems - leaving unconfigured Errors were encountered while processing: piuparts-depends-dummy 0m7.1s DEBUG: Command failed (status=1), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', '-yf', 'install'] 0m8.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Correcting dependencies... Done The following extra packages will be installed: libblas3gf libgfortran3 libghemical-data libghemical5 liblapack3gf libmopac7-1gf libmopac7-dev libsc-data libsc7 The following NEW packages will be installed: libblas3gf libgfortran3 libghemical-data libghemical5 liblapack3gf libmopac7-1gf libmopac7-dev libsc-data libsc7 0 upgraded, 9 newly installed, 0 to remove and 0 not upgraded. 1 not fully installed or removed. Need to get 10.2 MB of archives. After this operation, 30.7 MB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libgfortran3 amd64 4.4.5-8 [291 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main libblas3gf amd64 1.2-8 [229 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main liblapack3gf amd64 3.2.1-8 [4434 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main libmopac7-1gf amd64 1.15-4 [623 kB] Get:5 http://mirror.bm.debian.org/debian/ squeeze/main libsc-data all 2.3.1-6 [303 kB] Get:6 http://mirror.bm.debian.org/debian/ squeeze/main libsc7 amd64 2.3.1-6 [2825 kB] Get:7 http://mirror.bm.debian.org/debian/ squeeze/main libghemical-data all 2.99.1-1 [156 kB] Get:8 http://mirror.bm.debian.org/debian/ squeeze/main libghemical5 amd64 2.99.1-1 [508 kB] Get:9 http://mirror.bm.debian.org/debian/ squeeze/main libmopac7-dev amd64 1.15-4 [841 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 10.2 MB in 0s (18.6 MB/s) Selecting previously deselected package libgfortran3. (Reading database ... 6258 files and directories currently installed.) Unpacking libgfortran3 (from .../libgfortran3_4.4.5-8_amd64.deb) ... Selecting previously deselected package libblas3gf. Unpacking libblas3gf (from .../libblas3gf_1.2-8_amd64.deb) ... Selecting previously deselected package liblapack3gf. Unpacking liblapack3gf (from .../liblapack3gf_3.2.1-8_amd64.deb) ... Selecting previously deselected package libmopac7-1gf. Unpacking libmopac7-1gf (from .../libmopac7-1gf_1.15-4_amd64.deb) ... Selecting previously deselected package libsc-data. Unpacking libsc-data (from .../libsc-data_2.3.1-6_all.deb) ... Selecting previously deselected package libsc7. Unpacking libsc7 (from .../libsc7_2.3.1-6_amd64.deb) ... Selecting previously deselected package libghemical-data. Unpacking libghemical-data (from .../libghemical-data_2.99.1-1_all.deb) ... Selecting previously deselected package libghemical5. Unpacking libghemical5 (from .../libghemical5_2.99.1-1_amd64.deb) ... Selecting previously deselected package libmopac7-dev. Unpacking libmopac7-dev (from .../libmopac7-dev_1.15-4_amd64.deb) ... Setting up libgfortran3 (4.4.5-8) ... Setting up libblas3gf (1.2-8) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up liblapack3gf (3.2.1-8) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up libmopac7-1gf (1.15-4) ... Setting up libsc-data (2.3.1-6) ... Setting up libsc7 (2.3.1-6) ... Setting up libghemical-data (2.99.1-1) ... Setting up libghemical5 (2.99.1-1) ... Setting up libmopac7-dev (1.15-4) ... Setting up piuparts-depends-dummy (0.invalid.0) ... 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', '-yf', 'install'] 0m8.8s INFO: Installation of ['tmp/piuparts-depends-dummy.deb'] ok 0m8.8s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmpgyGiXf/tmp/piuparts-depends-dummy.deb 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m8.8s DUMP: piuparts-depends-dummy install ok installed 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m8.9s DUMP: (Reading database ... 6475 files and directories currently installed.) Removing piuparts-depends-dummy ... 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'clean'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'clean'] 0m9.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m9.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m10.4s DEBUG: No broken symlinks as far as we can find. 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-cache', 'policy'] 0m10.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages release v=6.0.9,o=Debian,a=oldstable,n=squeeze,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-cache', 'policy'] 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-cache', 'policy', 'libghemical-dev'] 0m10.5s DUMP: libghemical-dev: Installed: (none) Candidate: 2.99.1-1 Version table: 2.99.1-1 0 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages 0m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-cache', 'policy', 'libghemical-dev'] 0m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', '-y', 'install', 'libghemical-dev=2.99.1-1'] 0m11.1s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libghemical-dev 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 661 kB of archives. After this operation, 2671 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libghemical-dev amd64 2.99.1-1 [661 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 661 kB in 0s (14.0 MB/s) Selecting previously deselected package libghemical-dev. (Reading database ... 6475 files and directories currently installed.) Unpacking libghemical-dev (from .../libghemical-dev_2.99.1-1_amd64.deb) ... Setting up libghemical-dev (2.99.1-1) ... 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', '-y', 'install', 'libghemical-dev=2.99.1-1'] 0m11.1s INFO: Running scripts post_install 0m11.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m11.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m12.1s DEBUG: No broken symlinks as far as we can find. 0m12.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--get-selections', '*'] 0m12.1s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblas3gf install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install libgfortran3 install libghemical-data install libghemical-dev install libghemical5 install liblapack3gf install liblocale-gettext-perl install liblzma2 install libmopac7-1gf install libmopac7-dev install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libsc-data install libsc7 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install ncurses-base install ncurses-bin install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m12.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--get-selections', '*'] 0m12.7s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', '-ac'] 0m13.4s DUMP: debsums: no md5sums for mawk 0m13.4s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', '-ac'] 0m13.4s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m13.4s DUMP: 0.11.3~bpo70+1 0m13.4s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m13.4s INFO: Running adequate version 0.11.3~bpo70+1 now. 0m13.4s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'libghemical-dev'] 0m13.5s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'libghemical-dev'] 0m13.5s INFO: Running scripts pre_remove 0m13.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m13.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m13.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m13.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m13.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m13.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m13.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m13.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m13.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_exceptions'] 0m13.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/pre_remove_exceptions'] 0m13.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'remove', 'liblapack3gf', 'libblas3gf', 'libmopac7-dev', 'libghemical-data', 'libghemical5', 'libsc7', 'libgfortran3', 'libmopac7-1gf', 'libsc-data', 'libghemical-dev'] 0m14.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libblas3gf libgfortran3 libghemical-data libghemical-dev libghemical5 liblapack3gf libmopac7-1gf libmopac7-dev libsc-data libsc7 0 upgraded, 0 newly installed, 10 to remove and 0 not upgraded. After this operation, 33.4 MB disk space will be freed. (Reading database ... 6524 files and directories currently installed.) Removing libghemical-dev ... Removing libghemical5 ... Removing liblapack3gf ... Removing libblas3gf ... Removing libmopac7-dev ... Removing libmopac7-1gf ... Removing libgfortran3 ... Removing libghemical-data ... Removing libsc7 ... Removing libsc-data ... 0m14.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'remove', 'liblapack3gf', 'libblas3gf', 'libmopac7-dev', 'libghemical-data', 'libghemical5', 'libsc7', 'libgfortran3', 'libmopac7-1gf', 'libsc-data', 'libghemical-dev'] 0m14.2s INFO: Running scripts post_remove 0m14.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_remove_exceptions_lenny'] 0m14.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_remove_exceptions_lenny'] 0m14.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_remove_extras'] 0m14.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_remove_extras'] 0m14.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--purge', 'liblapack3gf', 'libblas3gf', 'libmopac7-dev', 'libghemical-data', 'libghemical5', 'libsc7', 'libgfortran3', 'libmopac7-1gf', 'libsc-data'] 0m14.4s DUMP: (Reading database ... 6258 files and directories currently installed.) Removing liblapack3gf ... Purging configuration files for liblapack3gf ... Removing libblas3gf ... Purging configuration files for libblas3gf ... dpkg: warning: ignoring request to remove libmopac7-dev which isn't installed. dpkg: warning: ignoring request to remove libghemical-data which isn't installed. Removing libghemical5 ... Purging configuration files for libghemical5 ... Removing libsc7 ... Purging configuration files for libsc7 ... Removing libgfortran3 ... Purging configuration files for libgfortran3 ... Removing libmopac7-1gf ... Purging configuration files for libmopac7-1gf ... dpkg: warning: ignoring request to remove libsc-data which isn't installed. 0m14.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--purge', 'liblapack3gf', 'libblas3gf', 'libmopac7-dev', 'libghemical-data', 'libghemical5', 'libsc7', 'libgfortran3', 'libmopac7-1gf', 'libsc-data'] 0m14.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--purge', 'libghemical-dev'] 0m14.4s DUMP: dpkg: warning: ignoring request to remove libghemical-dev which isn't installed. 0m14.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--purge', 'libghemical-dev'] 0m14.4s INFO: Running scripts post_purge 0m14.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_purge_exceptions'] 0m14.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'tmp/scripts/post_purge_exceptions'] 0m14.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--purge', '--pending'] 0m14.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--purge', '--pending'] 0m14.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--remove', '--pending'] 0m14.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg', '--remove', '--pending'] 0m14.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m14.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m15.4s ERROR: WARN: Broken symlinks: /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg-divert', '--list'] 0m15.4s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'dpkg-divert', '--list'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'clean'] 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'apt-get', 'clean'] 0m16.5s INFO: Warning: Package purging left files on system: /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf not owned These files seem to have been left by dependencies rather than by packages being explicitly tested. 0m16.5s INFO: PASS: Installation and purging test. 0m16.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'umount', '/proc'] 0m16.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgyGiXf', 'umount', '/proc'] 0m16.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m16.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpgyGiXf'] 0m16.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpgyGiXf 0m16.9s INFO: PASS: All tests. 0m16.9s INFO: piuparts run ends. ret=0 End: 2014-02-18 19:50:06 UTC