Start: 2014-02-28 15:12:57 UTC Package: meep Priority: optional Section: science Installed-Size: 620 Maintainer: Thorsten Alteholz Architecture: amd64 Version: 1.1.1-6 Depends: guile-1.8-libs, libc6 (>= 2.2.5), libctl3 (>= 3.0.3), libfftw3-3, libgcc1 (>= 1:4.1.1), libgmp3c2, libgsl0ldbl (>= 1.9), libharminv2 (>= 1.3.1), libhdf5-serial-1.8.4 | libhdf5-1.8.4, libltdl7 (>= 2.2.6b), libmeep6, libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) Recommends: h5utils Filename: pool/main/m/meep/meep_1.1.1-6_amd64.deb Size: 270400 MD5sum: fb35ce047884ceb2536f4880a9f3b8dc SHA1: 953bacfd28229bf5bfdf4fc12e3ed0776a479984 SHA256: 31792d93825613359ae01b840c4f775bb56136f100292df52be8d857e6863eff Description: software package for FDTD simulation Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package developed at MIT to model electromagnetic systems. . Its features include: * Simulation in 1d, 2d, 3d, and cylindrical coordinates. * Dispersive (including loss/gain) and nonlinear (Kerr & Pockels) materials. Magnetic permeability and electric/magnetic conductivities. * PML absorbing boundaries and/or perfect conductor and/or Bloch-periodic boundary conditions. * Exploitation of symmetries to reduce the computation size . even/odd mirror symmetries and 90/180 degree rotations. * Complete scriptability - either via a Scheme scripting front-end (as in libctl and MPB), or callable as a C++ library. * Field output in the HDF5 standard scientific data format, supported by many visualization tools. * Arbitrary material and source distributions. * Field analyses including flux spectra, frequency extraction, and energy integrals; completely programmable. * Multi-parameter optimization, root-finding, integration, etcetera (via libctl). . This package contains the software. Homepage: http://ab-initio.mit.edu/wiki/index.php/Meep Tag: field::physics, implemented-in::c++, role::program Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 35m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt meep=1.1.1-6 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at http://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.57.1~201402172317~0.57-12-g4a108e2 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt meep=1.1.1-6 0m0.0s INFO: Running on: Linux piu-slave-bm-a 3.2.0-4-amd64 #1 SMP Debian 3.2.54-2 x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpblSkLj 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpblSkLj 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpblSkLj', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.7s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpblSkLj', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ squeeze main 0m1.8s DEBUG: Created policy-rc.d and chmodded it. 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'update'] 0m3.5s DUMP: Get:1 http://mirror.bm.debian.org squeeze Release.gpg [1672 B] Ign http://mirror.bm.debian.org/debian/ squeeze/main Translation-en Get:2 http://mirror.bm.debian.org squeeze Release [96.0 kB] Get:3 http://mirror.bm.debian.org squeeze/main amd64 Packages [8388 kB] Fetched 8486 kB in 0s (8682 kB/s) Reading package lists... 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'update'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', '-yf', 'dist-upgrade'] 0m4.7s DUMP: Reading package lists... Building dependency tree... The following packages will be upgraded: base-files gnupg gpgv tzdata 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 3067 kB of archives. After this operation, 52.2 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main base-files amd64 6.0squeeze9 [76.1 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main gpgv amd64 1.4.10-4+squeeze4 [222 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main gnupg amd64 1.4.10-4+squeeze4 [2148 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main tzdata all 2013i-0squeeze1 [621 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3067 kB in 0s (36.3 MB/s) (Reading database ... 6155 files and directories currently installed.) Preparing to replace base-files 6.0squeeze8 (using .../base-files_6.0squeeze9_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.0squeeze9) ... Installing new version of config file /etc/debian_version ... (Reading database ... 6155 files and directories currently installed.) Preparing to replace gpgv 1.4.10-4+squeeze3 (using .../gpgv_1.4.10-4+squeeze4_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.10-4+squeeze4) ... (Reading database ... 6155 files and directories currently installed.) Preparing to replace gnupg 1.4.10-4+squeeze3 (using .../gnupg_1.4.10-4+squeeze4_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.10-4+squeeze4) ... (Reading database ... 6155 files and directories currently installed.) Preparing to replace tzdata 2013d-0squeeze1 (using .../tzdata_2013i-0squeeze1_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2013i-0squeeze1) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Feb 28 15:13:01 UTC 2014. Universal Time is now: Fri Feb 28 15:13:01 UTC 2014. Run 'dpkg-reconfigure tzdata' if you wish to change it. 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', '-yf', 'dist-upgrade'] 0m4.7s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpblSkLj/tmp/scripts/ 0m4.7s DEBUG: Copying scriptsdir /etc/piuparts/scripts-squeeze to /srv/piuparts.debian.org/tmp/tmpblSkLj/tmp/scripts/ 0m4.7s INFO: Running scripts post_setup 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_experimental'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_experimental'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_forbid_home'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_forbid_home'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.8s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' `/bin/sync' -> `true' 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m5.7s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Reading state information... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (17.1 MB/s) Selecting previously deselected package adduser. (Reading database ... 6135 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'clean'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'clean'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--get-selections', '*'] 0m6.2s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install liblocale-gettext-perl install liblzma2 install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install ncurses-base install ncurses-bin install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--get-selections', '*'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg-divert', '--list'] 0m6.2s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg-divert', '--list'] 0m6.2s INFO: apt-cache does not know about any of the requested packages 0m6.2s INFO: Running scripts pre_test 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_test_root_password'] 0m6.3s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_test_root_password'] 0m6.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m6.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m7.3s DEBUG: No broken symlinks as far as we can find. 0m7.3s INFO: Running scripts pre_install 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_install_database-server'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_install_database-server'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_install_exceptions'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_install_exceptions'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_install_extras'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_install_extras'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-cache', 'show', 'meep=1.1.1-6'] 0m7.4s DUMP: Package: meep Priority: optional Section: science Installed-Size: 620 Maintainer: Thorsten Alteholz Architecture: amd64 Version: 1.1.1-6 Depends: guile-1.8-libs, libc6 (>= 2.2.5), libctl3 (>= 3.0.3), libfftw3-3, libgcc1 (>= 1:4.1.1), libgmp3c2, libgsl0ldbl (>= 1.9), libharminv2 (>= 1.3.1), libhdf5-serial-1.8.4 | libhdf5-1.8.4, libltdl7 (>= 2.2.6b), libmeep6, libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) Recommends: h5utils Filename: pool/main/m/meep/meep_1.1.1-6_amd64.deb Size: 270400 MD5sum: fb35ce047884ceb2536f4880a9f3b8dc SHA1: 953bacfd28229bf5bfdf4fc12e3ed0776a479984 SHA256: 31792d93825613359ae01b840c4f775bb56136f100292df52be8d857e6863eff Description: software package for FDTD simulation Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package developed at MIT to model electromagnetic systems. . Its features include: * Simulation in 1d, 2d, 3d, and cylindrical coordinates. * Dispersive (including loss/gain) and nonlinear (Kerr & Pockels) materials. Magnetic permeability and electric/magnetic conductivities. * PML absorbing boundaries and/or perfect conductor and/or Bloch-periodic boundary conditions. * Exploitation of symmetries to reduce the computation size . even/odd mirror symmetries and 90/180 degree rotations. * Complete scriptability - either via a Scheme scripting front-end (as in libctl and MPB), or callable as a C++ library. * Field output in the HDF5 standard scientific data format, supported by many visualization tools. * Arbitrary material and source distributions. * Field analyses including flux spectra, frequency extraction, and energy integrals; completely programmable. * Multi-parameter optimization, root-finding, integration, etcetera (via libctl). . This package contains the software. Homepage: http://ab-initio.mit.edu/wiki/index.php/Meep Tag: field::physics, implemented-in::c++, role::program 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-cache', 'show', 'meep=1.1.1-6'] 0m7.4s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed Depends: guile-1.8-libs, libc6 (>= 2.2.5), libctl3 (>= 3.0.3), libfftw3-3, libgcc1 (>= 1:4.1.1), libgmp3c2, libgsl0ldbl (>= 1.9), libharminv2 (>= 1.3.1), libhdf5-serial-1.8.4 | libhdf5-1.8.4, libltdl7 (>= 2.2.6b), libmeep6, libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) 0m7.4s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmp0S66SK/piuparts-depends-dummy'] 0m7.4s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmp0S66SK/piuparts-depends-dummy.deb'. 0m7.4s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmp0S66SK/piuparts-depends-dummy'] 0m7.4s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmp0S66SK/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmpblSkLj/tmp 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m7.4s DUMP: Selecting previously deselected package piuparts-depends-dummy. (Reading database ... 6258 files and directories currently installed.) Unpacking piuparts-depends-dummy (from tmp/piuparts-depends-dummy.deb) ... dpkg: dependency problems prevent configuration of piuparts-depends-dummy: piuparts-depends-dummy depends on guile-1.8-libs; however: Package guile-1.8-libs is not installed. piuparts-depends-dummy depends on libctl3 (>= 3.0.3); however: Package libctl3 is not installed. piuparts-depends-dummy depends on libfftw3-3; however: Package libfftw3-3 is not installed. piuparts-depends-dummy depends on libgmp3c2; however: Package libgmp3c2 is not installed. piuparts-depends-dummy depends on libgsl0ldbl (>= 1.9); however: Package libgsl0ldbl is not installed. piuparts-depends-dummy depends on libharminv2 (>= 1.3.1); however: Package libharminv2 is not installed. piuparts-depends-dummy depends on libhdf5-serial-1.8.4 | libhdf5-1.8.4; however: Package libhdf5-serial-1.8.4 is not installed. Package libhdf5-1.8.4 is not installed. piuparts-depends-dummy depends on libltdl7 (>= 2.2.6b); however: Package libltdl7 is not installed. piuparts-depends-dummy depends on libmeep6; however: Package libmeep6 is not installed. dpkg: error processing piuparts-depends-dummy (--install): dependency problems - leaving unconfigured Errors were encountered while processing: piuparts-depends-dummy 0m7.4s DEBUG: Command failed (status=1), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', '-yf', 'install'] 0m9.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Correcting dependencies... Done The following extra packages will be installed: guile-1.8-libs libblas3gf libctl3 libfftw3-3 libgfortran3 libgmp3c2 libgsl0ldbl libharminv2 libhdf5-serial-1.8.4 liblapack3gf libltdl7 libmeep6 Suggested packages: libfftw3-dev gsl-ref-psdoc gsl-doc-pdf gsl-doc-info gsl-ref-html The following NEW packages will be installed: guile-1.8-libs libblas3gf libctl3 libfftw3-3 libgfortran3 libgmp3c2 libgsl0ldbl libharminv2 libhdf5-serial-1.8.4 liblapack3gf libltdl7 libmeep6 0 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 1 not fully installed or removed. Need to get 10.7 MB of archives. After this operation, 27.4 MB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libgmp3c2 amd64 2:4.3.2+dfsg-1 [313 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main libltdl7 amd64 2.2.6b-2 [296 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main guile-1.8-libs amd64 1.8.7+1-3 [752 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main libctl3 amd64 3.1.0-2 [101 kB] Get:5 http://mirror.bm.debian.org/debian/ squeeze/main libfftw3-3 amd64 3.2.2-1 [1399 kB] Get:6 http://mirror.bm.debian.org/debian/ squeeze/main libgsl0ldbl amd64 1.14+dfsg-1 [1024 kB] Get:7 http://mirror.bm.debian.org/debian/ squeeze/main libgfortran3 amd64 4.4.5-8 [291 kB] Get:8 http://mirror.bm.debian.org/debian/ squeeze/main libblas3gf amd64 1.2-8 [229 kB] Get:9 http://mirror.bm.debian.org/debian/ squeeze/main liblapack3gf amd64 3.2.1-8 [4434 kB] Get:10 http://mirror.bm.debian.org/debian/ squeeze/main libharminv2 amd64 1.3.1-7 [17.9 kB] Get:11 http://mirror.bm.debian.org/debian/ squeeze/main libhdf5-serial-1.8.4 amd64 1.8.4-patch1-2 [1479 kB] Get:12 http://mirror.bm.debian.org/debian/ squeeze/main libmeep6 amd64 1.1.1-6 [373 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 10.7 MB in 0s (11.0 MB/s) Selecting previously deselected package libgmp3c2. (Reading database ... 6258 files and directories currently installed.) Unpacking libgmp3c2 (from .../libgmp3c2_2%3a4.3.2+dfsg-1_amd64.deb) ... Selecting previously deselected package libltdl7. Unpacking libltdl7 (from .../libltdl7_2.2.6b-2_amd64.deb) ... Selecting previously deselected package guile-1.8-libs. Unpacking guile-1.8-libs (from .../guile-1.8-libs_1.8.7+1-3_amd64.deb) ... Selecting previously deselected package libctl3. Unpacking libctl3 (from .../libctl3_3.1.0-2_amd64.deb) ... Selecting previously deselected package libfftw3-3. Unpacking libfftw3-3 (from .../libfftw3-3_3.2.2-1_amd64.deb) ... Selecting previously deselected package libgsl0ldbl. Unpacking libgsl0ldbl (from .../libgsl0ldbl_1.14+dfsg-1_amd64.deb) ... Selecting previously deselected package libgfortran3. Unpacking libgfortran3 (from .../libgfortran3_4.4.5-8_amd64.deb) ... Selecting previously deselected package libblas3gf. Unpacking libblas3gf (from .../libblas3gf_1.2-8_amd64.deb) ... Selecting previously deselected package liblapack3gf. Unpacking liblapack3gf (from .../liblapack3gf_3.2.1-8_amd64.deb) ... Selecting previously deselected package libharminv2. Unpacking libharminv2 (from .../libharminv2_1.3.1-7_amd64.deb) ... Selecting previously deselected package libhdf5-serial-1.8.4. Unpacking libhdf5-serial-1.8.4 (from .../libhdf5-serial-1.8.4_1.8.4-patch1-2_amd64.deb) ... Selecting previously deselected package libmeep6. Unpacking libmeep6 (from .../libmeep6_1.1.1-6_amd64.deb) ... Setting up libgmp3c2 (2:4.3.2+dfsg-1) ... Setting up libltdl7 (2.2.6b-2) ... Setting up guile-1.8-libs (1.8.7+1-3) ... Setting up libctl3 (3.1.0-2) ... Setting up libfftw3-3 (3.2.2-1) ... Setting up libgsl0ldbl (1.14+dfsg-1) ... Setting up libgfortran3 (4.4.5-8) ... Setting up libblas3gf (1.2-8) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up liblapack3gf (3.2.1-8) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up libharminv2 (1.3.1-7) ... Setting up libhdf5-serial-1.8.4 (1.8.4-patch1-2) ... Setting up libmeep6 (1.1.1-6) ... Setting up piuparts-depends-dummy (0.invalid.0) ... 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', '-yf', 'install'] 0m9.7s INFO: Installation of ['tmp/piuparts-depends-dummy.deb'] ok 0m9.7s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmpblSkLj/tmp/piuparts-depends-dummy.deb 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m9.7s DUMP: piuparts-depends-dummy install ok installed 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m9.7s DUMP: (Reading database ... 6582 files and directories currently installed.) Removing piuparts-depends-dummy ... 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'clean'] 0m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'clean'] 0m10.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m10.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m11.3s DEBUG: No broken symlinks as far as we can find. 0m11.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-cache', 'policy'] 0m11.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages release v=6.0.9,o=Debian,a=oldstable,n=squeeze,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 0m11.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-cache', 'policy'] 0m11.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-cache', 'policy', 'meep'] 0m11.4s DUMP: meep: Installed: (none) Candidate: 1.1.1-6 Version table: 1.1.1-6 0 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages 0m11.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-cache', 'policy', 'meep'] 0m11.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', '-y', 'install', 'meep=1.1.1-6'] 0m12.0s DUMP: Reading package lists... Building dependency tree... Reading state information... Recommended packages: h5utils The following NEW packages will be installed: meep 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 270 kB of archives. After this operation, 635 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main meep amd64 1.1.1-6 [270 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 270 kB in 0s (2148 kB/s) Selecting previously deselected package meep. (Reading database ... 6582 files and directories currently installed.) Unpacking meep (from .../meep_1.1.1-6_amd64.deb) ... Setting up meep (1.1.1-6) ... 0m12.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', '-y', 'install', 'meep=1.1.1-6'] 0m12.0s INFO: Running scripts post_install 0m12.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m12.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m13.0s DEBUG: No broken symlinks as far as we can find. 0m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--get-selections', '*'] 0m13.1s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install guile-1.8-libs install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblas3gf install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libctl3 install libdb4.8 install libfftw3-3 install libgcc1 install libgfortran3 install libgmp3c2 install libgsl0ldbl install libharminv2 install libhdf5-serial-1.8.4 install liblapack3gf install liblocale-gettext-perl install libltdl7 install liblzma2 install libmeep6 install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install meep install mount install ncurses-base install ncurses-bin install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--get-selections', '*'] 0m13.6s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpblSkLj', '-ac'] 0m14.2s DUMP: debsums: no md5sums for mawk 0m14.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpblSkLj', '-ac'] 0m14.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m14.3s DUMP: 0.11.3~bpo70+1 0m14.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m14.3s INFO: Running adequate version 0.11.3~bpo70+1 now. 0m14.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'meep'] 0m14.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'meep'] 0m14.4s INFO: Running scripts pre_remove 0m14.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m14.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m14.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m14.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m14.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m14.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m14.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m14.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m14.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_exceptions'] 0m14.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/pre_remove_exceptions'] 0m14.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'remove', 'libctl3', 'libltdl7', 'libmeep6', 'libblas3gf', 'libhdf5-serial-1.8.4', 'libgmp3c2', 'libharminv2', 'liblapack3gf', 'libgfortran3', 'libgsl0ldbl', 'libfftw3-3', 'guile-1.8-libs', 'meep'] 0m15.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: guile-1.8-libs libblas3gf libctl3 libfftw3-3 libgfortran3 libgmp3c2 libgsl0ldbl libharminv2 libhdf5-serial-1.8.4 liblapack3gf libltdl7 libmeep6 meep 0 upgraded, 0 newly installed, 13 to remove and 0 not upgraded. After this operation, 28.0 MB disk space will be freed. (Reading database ... 6591 files and directories currently installed.) Removing meep ... Removing libctl3 ... Removing guile-1.8-libs ... Removing libmeep6 ... Removing libharminv2 ... Removing liblapack3gf ... Removing libblas3gf ... Removing libfftw3-3 ... Removing libhdf5-serial-1.8.4 ... Removing libgfortran3 ... Removing libgmp3c2 ... Removing libgsl0ldbl ... Removing libltdl7 ... 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'remove', 'libctl3', 'libltdl7', 'libmeep6', 'libblas3gf', 'libhdf5-serial-1.8.4', 'libgmp3c2', 'libharminv2', 'liblapack3gf', 'libgfortran3', 'libgsl0ldbl', 'libfftw3-3', 'guile-1.8-libs', 'meep'] 0m15.2s INFO: Running scripts post_remove 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_remove_exceptions_lenny'] 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_remove_exceptions_lenny'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_remove_extras'] 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_remove_extras'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--purge', 'libctl3', 'libltdl7', 'libmeep6', 'libblas3gf', 'libhdf5-serial-1.8.4', 'libgmp3c2', 'libharminv2', 'liblapack3gf', 'libgfortran3', 'libgsl0ldbl', 'libfftw3-3', 'guile-1.8-libs'] 0m15.4s DUMP: (Reading database ... 6258 files and directories currently installed.) Removing libctl3 ... Purging configuration files for libctl3 ... Removing libltdl7 ... Purging configuration files for libltdl7 ... Removing libmeep6 ... Purging configuration files for libmeep6 ... Removing libblas3gf ... Purging configuration files for libblas3gf ... Removing libhdf5-serial-1.8.4 ... Purging configuration files for libhdf5-serial-1.8.4 ... Removing libgmp3c2 ... Purging configuration files for libgmp3c2 ... Removing libharminv2 ... Purging configuration files for libharminv2 ... Removing liblapack3gf ... Purging configuration files for liblapack3gf ... Removing libgfortran3 ... Purging configuration files for libgfortran3 ... Removing libgsl0ldbl ... Purging configuration files for libgsl0ldbl ... Removing libfftw3-3 ... Purging configuration files for libfftw3-3 ... Removing guile-1.8-libs ... Purging configuration files for guile-1.8-libs ... 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--purge', 'libctl3', 'libltdl7', 'libmeep6', 'libblas3gf', 'libhdf5-serial-1.8.4', 'libgmp3c2', 'libharminv2', 'liblapack3gf', 'libgfortran3', 'libgsl0ldbl', 'libfftw3-3', 'guile-1.8-libs'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--purge', 'meep'] 0m15.4s DUMP: dpkg: warning: ignoring request to remove meep which isn't installed. 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--purge', 'meep'] 0m15.4s INFO: Running scripts post_purge 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_purge_exceptions'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'tmp/scripts/post_purge_exceptions'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--purge', '--pending'] 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--purge', '--pending'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--remove', '--pending'] 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg', '--remove', '--pending'] 0m15.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m15.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m16.5s ERROR: WARN: Broken symlinks: /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf 0m16.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg-divert', '--list'] 0m16.5s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m16.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'dpkg-divert', '--list'] 0m16.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'clean'] 0m16.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'apt-get', 'clean'] 0m17.5s INFO: Warning: Package purging left files on system: /etc/alternatives/liblapack.so.3gf -> /usr/lib/lapack/liblapack.so.3gf not owned These files seem to have been left by dependencies rather than by packages being explicitly tested. 0m17.5s INFO: PASS: Installation and purging test. 0m17.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'umount', '/proc'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpblSkLj', 'umount', '/proc'] 0m17.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m17.8s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpblSkLj'] 0m17.8s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpblSkLj 0m17.8s INFO: PASS: All tests. 0m17.8s INFO: piuparts run ends. ret=0 End: 2014-02-28 15:13:15 UTC