Start: 2014-04-10 19:22:11 UTC Package: njplot Priority: optional Section: science Installed-Size: 364 Maintainer: Debian-Med Packaging Team Architecture: amd64 Version: 2.3-2 Depends: lesstif2, libc6 (>= 2.3), libncbi6 (>= 6.1.20030421), libvibrant6a (>= 6.1.20060507), libx11-6, libxmu6, libxt6 Filename: pool/main/n/njplot/njplot_2.3-2_amd64.deb Size: 121500 MD5sum: 412a56d4ab64a1526a3287c555064c89 SHA1: fbac63400965c1741c5bf6016dce9d1b54226b3f SHA256: daebdb097135d5b2d7f004a7cd4f6947d7ea4b31923f0358b8ac53d064ab18ad Description: A phylogenetic tree drawing program NJplot is able to draw any dendrogram expressed in the Newick standard phylogenetic tree format (e.g., the format used by the Phylip package). NJplot is especially convenient for rooting the unrooted trees obtained from parsimony, distance or maximum likelihood tree-building methods. Homepage: http://pbil.univ-lyon1.fr/software/njplot.html Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::x11, role::program, scope::utility, uitoolkit::motif, use::{analysing,editing,organizing,printing,viewing}, works-with-format::plaintext, x11::application Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 35m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt njplot=2.3-2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at http://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.57.1~201403012113~0.57-23-gfd8571c starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-squeeze --warn-on-debsums-errors --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze --no-upgrade-test --apt njplot=2.3-2 0m0.0s INFO: Running on: Linux piu-slave-bm-a 3.2.0-4-amd64 #1 SMP Debian 3.2.54-2 x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpoTsHmE 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpoTsHmE 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.8s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'mount', '-t', 'proc', 'proc', '/proc'] 0m1.8s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ squeeze main 0m1.8s DEBUG: Created policy-rc.d and chmodded it. 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'update'] 0m1.9s DUMP: Hit http://mirror.bm.debian.org squeeze Release.gpg Ign http://mirror.bm.debian.org/debian/ squeeze/main Translation-en Hit http://mirror.bm.debian.org squeeze Release Hit http://mirror.bm.debian.org squeeze/main amd64 Packages Reading package lists... 0m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'update'] 0m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', '-yf', 'dist-upgrade'] 0m2.2s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', '-yf', 'dist-upgrade'] 0m2.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpoTsHmE/tmp/scripts/ 0m2.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts-squeeze to /srv/piuparts.debian.org/tmp/tmpoTsHmE/tmp/scripts/ 0m2.2s INFO: Running scripts post_setup 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_experimental'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_experimental'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_forbid_home'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_forbid_home'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m3.4s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (911 kB/s) Selecting previously deselected package adduser. (Reading database ... 6135 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_setup_squeeze-fake-essential'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'clean'] 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'clean'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--get-selections', '*'] 0m3.9s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libgcc1 install liblocale-gettext-perl install liblzma2 install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libreadline6 install libselinux1 install libsepol1 install libslang2 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install login install lsb-base install mawk install mount install ncurses-base install ncurses-bin install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install xz-utils install zlib1g install 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--get-selections', '*'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg-divert', '--list'] 0m4.0s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg-divert', '--list'] 0m4.0s INFO: apt-cache does not know about any of the requested packages 0m4.0s INFO: Running scripts pre_test 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_test_root_password'] 0m4.0s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_test_root_password'] 0m4.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m4.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m5.0s DEBUG: No broken symlinks as far as we can find. 0m5.0s INFO: Running scripts pre_install 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_install_database-server'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_install_database-server'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_install_exceptions'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_install_exceptions'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_install_extras'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_install_extras'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-cache', 'show', 'njplot=2.3-2'] 0m5.1s DUMP: Package: njplot Priority: optional Section: science Installed-Size: 364 Maintainer: Debian-Med Packaging Team Architecture: amd64 Version: 2.3-2 Depends: lesstif2, libc6 (>= 2.3), libncbi6 (>= 6.1.20030421), libvibrant6a (>= 6.1.20060507), libx11-6, libxmu6, libxt6 Filename: pool/main/n/njplot/njplot_2.3-2_amd64.deb Size: 121500 MD5sum: 412a56d4ab64a1526a3287c555064c89 SHA1: fbac63400965c1741c5bf6016dce9d1b54226b3f SHA256: daebdb097135d5b2d7f004a7cd4f6947d7ea4b31923f0358b8ac53d064ab18ad Description: A phylogenetic tree drawing program NJplot is able to draw any dendrogram expressed in the Newick standard phylogenetic tree format (e.g., the format used by the Phylip package). NJplot is especially convenient for rooting the unrooted trees obtained from parsimony, distance or maximum likelihood tree-building methods. Homepage: http://pbil.univ-lyon1.fr/software/njplot.html Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::x11, role::program, scope::utility, uitoolkit::motif, use::{analysing,editing,organizing,printing,viewing}, works-with-format::plaintext, x11::application 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-cache', 'show', 'njplot=2.3-2'] 0m5.1s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed Depends: lesstif2, libc6 (>= 2.3), libncbi6 (>= 6.1.20030421), libvibrant6a (>= 6.1.20060507), libx11-6, libxmu6, libxt6 0m5.1s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmp7NLWcP/piuparts-depends-dummy'] 0m5.2s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmp7NLWcP/piuparts-depends-dummy.deb'. 0m5.2s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmp7NLWcP/piuparts-depends-dummy'] 0m5.2s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmp7NLWcP/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmpoTsHmE/tmp 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m5.2s DUMP: Selecting previously deselected package piuparts-depends-dummy. (Reading database ... 6258 files and directories currently installed.) Unpacking piuparts-depends-dummy (from tmp/piuparts-depends-dummy.deb) ... dpkg: dependency problems prevent configuration of piuparts-depends-dummy: piuparts-depends-dummy depends on lesstif2; however: Package lesstif2 is not installed. piuparts-depends-dummy depends on libncbi6 (>= 6.1.20030421); however: Package libncbi6 is not installed. piuparts-depends-dummy depends on libvibrant6a (>= 6.1.20060507); however: Package libvibrant6a is not installed. piuparts-depends-dummy depends on libx11-6; however: Package libx11-6 is not installed. piuparts-depends-dummy depends on libxmu6; however: Package libxmu6 is not installed. piuparts-depends-dummy depends on libxt6; however: Package libxt6 is not installed. dpkg: error processing piuparts-depends-dummy (--install): dependency problems - leaving unconfigured Errors were encountered while processing: piuparts-depends-dummy 0m5.2s DEBUG: Command failed (status=1), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '-i', 'tmp/piuparts-depends-dummy.deb'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', '-yf', 'install'] 0m7.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Correcting dependencies... Done The following extra packages will be installed: lesstif2 libdrm2 libfreetype6 libgl1-mesa-glx libglu1-mesa libice6 libncbi6 libpng12-0 libsm6 libvibrant6a libx11-6 libx11-data libxau6 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxmu6 libxp6 libxt6 libxxf86vm1 ncbi-data x11-common Recommended packages: libgl1-mesa-dri The following NEW packages will be installed: lesstif2 libdrm2 libfreetype6 libgl1-mesa-glx libglu1-mesa libice6 libncbi6 libpng12-0 libsm6 libvibrant6a libx11-6 libx11-data libxau6 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxmu6 libxp6 libxt6 libxxf86vm1 ncbi-data x11-common 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded. 1 not fully installed or removed. Need to get 12.4 MB of archives. After this operation, 35.2 MB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main libfreetype6 amd64 2.4.2-2.1+squeeze4 [377 kB] Get:2 http://mirror.bm.debian.org/debian/ squeeze/main x11-common all 1:7.5+8+squeeze1 [279 kB] Get:3 http://mirror.bm.debian.org/debian/ squeeze/main libice6 amd64 2:1.0.6-2 [53.8 kB] Get:4 http://mirror.bm.debian.org/debian/ squeeze/main libsm6 amd64 2:1.1.1-1 [25.0 kB] Get:5 http://mirror.bm.debian.org/debian/ squeeze/main libxau6 amd64 1:1.0.6-1 [16.8 kB] Get:6 http://mirror.bm.debian.org/debian/ squeeze/main libxdmcp6 amd64 1:1.0.3-2 [19.3 kB] Get:7 http://mirror.bm.debian.org/debian/ squeeze/main libxcb1 amd64 1.6-1+squeeze1 [44.3 kB] Get:8 http://mirror.bm.debian.org/debian/ squeeze/main libx11-data all 2:1.3.3-4+squeeze1 [184 kB] Get:9 http://mirror.bm.debian.org/debian/ squeeze/main libx11-6 amd64 2:1.3.3-4+squeeze1 [847 kB] Get:10 http://mirror.bm.debian.org/debian/ squeeze/main libxext6 amd64 2:1.1.2-1+squeeze1 [45.5 kB] Get:11 http://mirror.bm.debian.org/debian/ squeeze/main libxp6 amd64 1:1.0.0.xsf1-2+squeeze1 [18.4 kB] Get:12 http://mirror.bm.debian.org/debian/ squeeze/main libxt6 amd64 1:1.0.7-1+squeeze1 [195 kB] Get:13 http://mirror.bm.debian.org/debian/ squeeze/main lesstif2 amd64 1:0.95.2-1 [699 kB] Get:14 http://mirror.bm.debian.org/debian/ squeeze/main ncbi-data all 6.1.20090809-2 [2808 kB] Get:15 http://mirror.bm.debian.org/debian/ squeeze/main libncbi6 amd64 6.1.20090809-2 [4214 kB] Get:16 http://mirror.bm.debian.org/debian/ squeeze/main libdrm2 amd64 2.4.21-1~squeeze3 [418 kB] Get:17 http://mirror.bm.debian.org/debian/ squeeze/main libxfixes3 amd64 1:4.0.5-1+squeeze1 [19.2 kB] Get:18 http://mirror.bm.debian.org/debian/ squeeze/main libxdamage1 amd64 1:1.1.3-1 [14.1 kB] Get:19 http://mirror.bm.debian.org/debian/ squeeze/main libxxf86vm1 amd64 1:1.1.0-2+squeeze1 [15.8 kB] Get:20 http://mirror.bm.debian.org/debian/ squeeze/main libgl1-mesa-glx amd64 7.7.1-6 [182 kB] Get:21 http://mirror.bm.debian.org/debian/ squeeze/main libglu1-mesa amd64 7.7.1-6 [216 kB] Get:22 http://mirror.bm.debian.org/debian/ squeeze/main libpng12-0 amd64 1.2.44-1+squeeze4 [180 kB] Get:23 http://mirror.bm.debian.org/debian/ squeeze/main libxmu6 amd64 2:1.0.5-2 [58.4 kB] Get:24 http://mirror.bm.debian.org/debian/ squeeze/main libvibrant6a amd64 6.1.20090809-2 [1484 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.4 MB in 0s (15.6 MB/s) Selecting previously deselected package libfreetype6. (Reading database ... 6258 files and directories currently installed.) Unpacking libfreetype6 (from .../libfreetype6_2.4.2-2.1+squeeze4_amd64.deb) ... Selecting previously deselected package x11-common. Unpacking x11-common (from .../x11-common_1%3a7.5+8+squeeze1_all.deb) ... Selecting previously deselected package libice6. Unpacking libice6 (from .../libice6_2%3a1.0.6-2_amd64.deb) ... Selecting previously deselected package libsm6. Unpacking libsm6 (from .../libsm6_2%3a1.1.1-1_amd64.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.6-1_amd64.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.3-2_amd64.deb) ... Selecting previously deselected package libxcb1. Unpacking libxcb1 (from .../libxcb1_1.6-1+squeeze1_amd64.deb) ... Selecting previously deselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.3.3-4+squeeze1_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.3.3-4+squeeze1_amd64.deb) ... Selecting previously deselected package libxext6. Unpacking libxext6 (from .../libxext6_2%3a1.1.2-1+squeeze1_amd64.deb) ... Selecting previously deselected package libxp6. Unpacking libxp6 (from .../libxp6_1%3a1.0.0.xsf1-2+squeeze1_amd64.deb) ... Selecting previously deselected package libxt6. Unpacking libxt6 (from .../libxt6_1%3a1.0.7-1+squeeze1_amd64.deb) ... Selecting previously deselected package lesstif2. Unpacking lesstif2 (from .../lesstif2_1%3a0.95.2-1_amd64.deb) ... Selecting previously deselected package ncbi-data. Unpacking ncbi-data (from .../ncbi-data_6.1.20090809-2_all.deb) ... Selecting previously deselected package libncbi6. Unpacking libncbi6 (from .../libncbi6_6.1.20090809-2_amd64.deb) ... Selecting previously deselected package libdrm2. Unpacking libdrm2 (from .../libdrm2_2.4.21-1~squeeze3_amd64.deb) ... Selecting previously deselected package libxfixes3. Unpacking libxfixes3 (from .../libxfixes3_1%3a4.0.5-1+squeeze1_amd64.deb) ... Selecting previously deselected package libxdamage1. Unpacking libxdamage1 (from .../libxdamage1_1%3a1.1.3-1_amd64.deb) ... Selecting previously deselected package libxxf86vm1. Unpacking libxxf86vm1 (from .../libxxf86vm1_1%3a1.1.0-2+squeeze1_amd64.deb) ... Selecting previously deselected package libgl1-mesa-glx. Unpacking libgl1-mesa-glx (from .../libgl1-mesa-glx_7.7.1-6_amd64.deb) ... Selecting previously deselected package libglu1-mesa. Unpacking libglu1-mesa (from .../libglu1-mesa_7.7.1-6_amd64.deb) ... Selecting previously deselected package libpng12-0. Unpacking libpng12-0 (from .../libpng12-0_1.2.44-1+squeeze4_amd64.deb) ... Selecting previously deselected package libxmu6. Unpacking libxmu6 (from .../libxmu6_2%3a1.0.5-2_amd64.deb) ... Selecting previously deselected package libvibrant6a. Unpacking libvibrant6a (from .../libvibrant6a_6.1.20090809-2_amd64.deb) ... Setting up libfreetype6 (2.4.2-2.1+squeeze4) ... Setting up x11-common (1:7.5+8+squeeze1) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6 (2:1.0.6-2) ... Setting up libsm6 (2:1.1.1-1) ... Setting up libxau6 (1:1.0.6-1) ... Setting up libxdmcp6 (1:1.0.3-2) ... Setting up libxcb1 (1.6-1+squeeze1) ... Setting up libx11-data (2:1.3.3-4+squeeze1) ... Setting up libx11-6 (2:1.3.3-4+squeeze1) ... Setting up libxext6 (2:1.1.2-1+squeeze1) ... Setting up libxp6 (1:1.0.0.xsf1-2+squeeze1) ... Setting up libxt6 (1:1.0.7-1+squeeze1) ... Setting up lesstif2 (1:0.95.2-1) ... Setting up ncbi-data (6.1.20090809-2) ... Setting up libncbi6 (6.1.20090809-2) ... Setting up libdrm2 (2.4.21-1~squeeze3) ... Setting up libxfixes3 (1:4.0.5-1+squeeze1) ... Setting up libxdamage1 (1:1.1.3-1) ... Setting up libxxf86vm1 (1:1.1.0-2+squeeze1) ... Setting up libgl1-mesa-glx (7.7.1-6) ... Setting up libglu1-mesa (7.7.1-6) ... Setting up libpng12-0 (1.2.44-1+squeeze4) ... Setting up libxmu6 (2:1.0.5-2) ... Setting up libvibrant6a (6.1.20090809-2) ... Setting up piuparts-depends-dummy (0.invalid.0) ... 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', '-yf', 'install'] 0m7.8s INFO: Installation of ['tmp/piuparts-depends-dummy.deb'] ok 0m7.8s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmpoTsHmE/tmp/piuparts-depends-dummy.deb 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m7.9s DUMP: piuparts-depends-dummy install ok installed 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m7.9s DUMP: (Reading database ... 6839 files and directories currently installed.) Removing piuparts-depends-dummy ... 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'clean'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'clean'] 0m8.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m8.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m9.6s DEBUG: No broken symlinks as far as we can find. 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-cache', 'policy'] 0m9.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages release v=6.0.9,o=Debian,a=oldstable,n=squeeze,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-cache', 'policy'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-cache', 'policy', 'njplot'] 0m9.7s DUMP: njplot: Installed: (none) Candidate: 2.3-2 Version table: 2.3-2 0 500 http://mirror.bm.debian.org/debian/ squeeze/main amd64 Packages 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-cache', 'policy', 'njplot'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', '-y', 'install', 'njplot=2.3-2'] 0m10.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: njplot 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 122 kB of archives. After this operation, 373 kB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ squeeze/main njplot amd64 2.3-2 [122 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 122 kB in 0s (2207 kB/s) Selecting previously deselected package njplot. (Reading database ... 6839 files and directories currently installed.) Unpacking njplot (from .../njplot_2.3-2_amd64.deb) ... Setting up njplot (2.3-2) ... 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', '-y', 'install', 'njplot=2.3-2'] 0m10.2s INFO: Running scripts post_install 0m10.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m10.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m11.4s DEBUG: No broken symlinks as far as we can find. 0m11.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--get-selections', '*'] 0m11.4s DUMP: adduser install apt install base-files install base-passwd install bash install bsdutils install coreutils install dash install debconf install debconf-i18n install debian-archive-keyring install debianutils install diffutils install dpkg install e2fslibs install e2fsprogs install findutils install gcc-4.4-base install gnupg install gpgv install grep install gzip install hostname install initscripts install insserv install lesstif2 install libacl1 install libattr1 install libblkid1 install libbz2-1.0 install libc-bin install libc6 install libcomerr2 install libdb4.8 install libdrm2 install libfreetype6 install libgcc1 install libgl1-mesa-glx install libglu1-mesa install libice6 install liblocale-gettext-perl install liblzma2 install libncbi6 install libncurses5 install libpam-modules install libpam-runtime install libpam0g install libpng12-0 install libreadline6 install libselinux1 install libsepol1 install libslang2 install libsm6 install libss2 install libstdc++6 install libtext-charwidth-perl install libtext-iconv-perl install libtext-wrapi18n-perl install libusb-0.1-4 install libuuid1 install libvibrant6a install libx11-6 install libx11-data install libxau6 install libxcb1 install libxdamage1 install libxdmcp6 install libxext6 install libxfixes3 install libxmu6 install libxp6 install libxt6 install libxxf86vm1 install login install lsb-base install mawk install mount install ncbi-data install ncurses-base install ncurses-bin install njplot install passwd install perl-base install readline-common install sed install sensible-utils install sysv-rc install sysvinit install sysvinit-utils install tar install tzdata install ucf install util-linux install x11-common install xz-utils install zlib1g install 0m11.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--get-selections', '*'] 0m12.0s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', '-ac'] 0m12.7s DUMP: debsums: no md5sums for mawk 0m12.7s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', '-ac'] 0m12.7s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m12.7s DUMP: 0.11.3~bpo70+1 0m12.7s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m12.7s INFO: Running adequate version 0.11.3~bpo70+1 now. 0m12.7s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'njplot'] 0m12.8s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'njplot'] 0m12.8s INFO: Running scripts pre_remove 0m12.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_exceptions'] 0m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/pre_remove_exceptions'] 0m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'remove', 'libx11-data', 'libxcb1', 'libgl1-mesa-glx', 'libxext6', 'lesstif2', 'libfreetype6', 'libice6', 'libsm6', 'libpng12-0', 'libvibrant6a', 'libxau6', 'libx11-6', 'libxfixes3', 'libdrm2', 'ncbi-data', 'libxmu6', 'x11-common', 'libglu1-mesa', 'libxt6', 'libxxf86vm1', 'libxp6', 'libncbi6', 'libxdamage1', 'libxdmcp6', 'njplot'] 0m13.7s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: lesstif2 libdrm2 libfreetype6 libgl1-mesa-glx libglu1-mesa libice6 libncbi6 libpng12-0 libsm6 libvibrant6a libx11-6 libx11-data libxau6 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxmu6 libxp6 libxt6 libxxf86vm1 ncbi-data njplot x11-common 0 upgraded, 0 newly installed, 25 to remove and 0 not upgraded. After this operation, 35.5 MB disk space will be freed. (Reading database ... 6868 files and directories currently installed.) Removing njplot ... Removing libvibrant6a ... Removing lesstif2 ... Removing libglu1-mesa ... Removing libgl1-mesa-glx ... Removing libdrm2 ... Removing libfreetype6 ... Removing libxmu6 ... Removing libxt6 ... Removing libsm6 ... Removing libice6 ... Removing libncbi6 ... Removing libpng12-0 ... Removing libxxf86vm1 ... Removing libxp6 ... Removing libxdamage1 ... Removing libxfixes3 ... Removing libxext6 ... Removing libx11-6 ... Removing libx11-data ... Removing libxcb1 ... Removing libxau6 ... Removing libxdmcp6 ... Removing ncbi-data ... Removing x11-common ... invoke-rc.d: policy-rc.d denied execution of stop. 0m13.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'remove', 'libx11-data', 'libxcb1', 'libgl1-mesa-glx', 'libxext6', 'lesstif2', 'libfreetype6', 'libice6', 'libsm6', 'libpng12-0', 'libvibrant6a', 'libxau6', 'libx11-6', 'libxfixes3', 'libdrm2', 'ncbi-data', 'libxmu6', 'x11-common', 'libglu1-mesa', 'libxt6', 'libxxf86vm1', 'libxp6', 'libncbi6', 'libxdamage1', 'libxdmcp6', 'njplot'] 0m13.7s INFO: Running scripts post_remove 0m13.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_remove_exceptions_lenny'] 0m13.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_remove_exceptions_lenny'] 0m13.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_remove_extras'] 0m13.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_remove_extras'] 0m13.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--purge', 'libx11-data', 'libxcb1', 'libgl1-mesa-glx', 'libxext6', 'lesstif2', 'libfreetype6', 'libice6', 'libsm6', 'libpng12-0', 'libvibrant6a', 'libxau6', 'libx11-6', 'libxfixes3', 'libdrm2', 'ncbi-data', 'libxmu6', 'x11-common', 'libglu1-mesa', 'libxt6', 'libxxf86vm1', 'libxp6', 'libncbi6', 'libxdamage1', 'libxdmcp6'] 0m14.0s DUMP: dpkg: warning: ignoring request to remove libx11-data which isn't installed. (Reading database ... 6278 files and directories currently installed.) Removing libxcb1 ... Purging configuration files for libxcb1 ... Removing libgl1-mesa-glx ... Purging configuration files for libgl1-mesa-glx ... Removing libxext6 ... Purging configuration files for libxext6 ... Removing lesstif2 ... Purging configuration files for lesstif2 ... Removing libfreetype6 ... Purging configuration files for libfreetype6 ... Removing libice6 ... Purging configuration files for libice6 ... Removing libsm6 ... Purging configuration files for libsm6 ... Removing libpng12-0 ... Purging configuration files for libpng12-0 ... Removing libvibrant6a ... Purging configuration files for libvibrant6a ... Removing libxau6 ... Purging configuration files for libxau6 ... Removing libx11-6 ... Purging configuration files for libx11-6 ... Removing libxfixes3 ... Purging configuration files for libxfixes3 ... Removing libdrm2 ... Purging configuration files for libdrm2 ... Removing ncbi-data ... Purging configuration files for ncbi-data ... Removing libxmu6 ... Purging configuration files for libxmu6 ... Removing x11-common ... Purging configuration files for x11-common ... Removing libglu1-mesa ... Purging configuration files for libglu1-mesa ... Removing libxt6 ... Purging configuration files for libxt6 ... Removing libxxf86vm1 ... Purging configuration files for libxxf86vm1 ... Removing libxp6 ... Purging configuration files for libxp6 ... Removing libncbi6 ... Purging configuration files for libncbi6 ... Removing libxdamage1 ... Purging configuration files for libxdamage1 ... Removing libxdmcp6 ... Purging configuration files for libxdmcp6 ... 0m14.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--purge', 'libx11-data', 'libxcb1', 'libgl1-mesa-glx', 'libxext6', 'lesstif2', 'libfreetype6', 'libice6', 'libsm6', 'libpng12-0', 'libvibrant6a', 'libxau6', 'libx11-6', 'libxfixes3', 'libdrm2', 'ncbi-data', 'libxmu6', 'x11-common', 'libglu1-mesa', 'libxt6', 'libxxf86vm1', 'libxp6', 'libncbi6', 'libxdamage1', 'libxdmcp6'] 0m14.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--purge', 'njplot'] 0m14.1s DUMP: (Reading database ... 6258 files and directories currently installed.) Removing njplot ... Purging configuration files for njplot ... 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--purge', 'njplot'] 0m14.1s INFO: Running scripts post_purge 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_purge_exceptions'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'tmp/scripts/post_purge_exceptions'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--purge', '--pending'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--purge', '--pending'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--remove', '--pending'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg', '--remove', '--pending'] 0m14.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m14.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m15.2s DEBUG: No broken symlinks as far as we can find. 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg-divert', '--list'] 0m15.2s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'dpkg-divert', '--list'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'clean'] 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'apt-get', 'clean'] 0m16.2s INFO: PASS: Installation and purging test. 0m16.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'umount', '/proc'] 0m16.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpoTsHmE', 'umount', '/proc'] 0m16.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m16.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpoTsHmE'] 0m16.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpoTsHmE 0m16.6s INFO: PASS: All tests. 0m16.6s INFO: piuparts run ends. ret=0 End: 2014-04-10 19:22:28 UTC