Start: 2018-10-21 13:38:22 UTC [squeeze] Package: emboss Priority: optional Section: science Installed-Size: 3788 Maintainer: Debian Med Packaging Team Architecture: amd64 Version: 6.1.0-5 Depends: emboss-lib, libajax6, libc6 (>= 2.7), libfreetype6 (>= 2.2.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libjpeg62, libnucleus6, libpng12-0 (>= 1.2.13-4), libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.1.0-5), csh | c-shell Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Filename: pool/main/e/emboss/emboss_6.1.0-5_amd64.deb Size: 932220 MD5sum: 3ed3129a5af9cab88bcb5a9451ef819d SHA1: 3c132e05590c6d6fb68b1e3adc1da73618f5cfc5 SHA256: bd8f8be2c6370065481c124486bde946a8cef66971d76a28e47a662f1476fb7b Description: the european molecular biology open software suite EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages. Homepage: http://emboss.sourceforge.net Tag: field::{biology,biology:bioinformatics,biology:molecular}, implemented-in::c, interface::commandline, role::program, scope::suite, use::{analysing,comparing,converting,editing,organizing,searching,text-formatting,typesetting,viewing}, works-with::db, works-with-format::plaintext [squeeze-backports] Package: emboss Version: 6.3.1-6~bpo60+1 Installed-Size: 4008 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (= 6.3.1-6~bpo60+1), libc6 (>= 2.7), libexpat1 (>= 1.95.8), libfreetype6 (>= 2.2.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libhpdf-2.1.0 (>= 2.1.0+dfsg), libjpeg62 (>= 6b1), libmysqlclient16 (>= 5.1.21-1), libpng12-0 (>= 1.2.13-4), libpq5 (>= 8.4~0cvs20090328), libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.3.1-6~bpo60+1) Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Description: the european molecular biology open software suite Homepage: http://emboss.sourceforge.net Description-md5: 9d38473c684b5a463f410b72d1ac17f3 Section: science Priority: optional Filename: pool/main/e/emboss/emboss_6.3.1-6~bpo60+1_amd64.deb Size: 1005082 MD5sum: 5a17d109ab3b0220fd13eab03d980007 SHA1: fd5f777ff375231876955001492733abd920bccc SHA256: fc5a90853ef6b8136e9f9d14dd57950bad70b29b9e9e6d09b7f077e188b0c963 [wheezy-lts] Package: emboss Version: 6.4.0-2 Installed-Size: 4157 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (= 6.4.0-2), libc6 (>= 2.7), libexpat1 (>= 2.0.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libhpdf-2.2.1, libmysqlclient18 (>= 5.5.24+dfsg-1), libpng12-0 (>= 1.2.13-4), libpq5, libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.4.0-2) Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Description: european molecular biology open software suite Homepage: http://emboss.sourceforge.net Description-md5: 4f3d6a457939538fb5f7639f0452d33e Tag: field::biology, field::biology:bioinformatics, field::biology:molecular, implemented-in::c, interface::commandline, role::program, scope::suite, use::analysing, use::comparing, use::converting, use::editing, use::organizing, use::searching, use::text-formatting, use::typesetting, use::viewing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO, works-with::db Section: science Priority: optional Filename: pool/main/e/emboss/emboss_6.4.0-2_amd64.deb Size: 1008618 MD5sum: 5dbd6ac006faec47a9215a66df6c745e SHA1: 6f0f745d8aede1a01eaa16b8cb447480550afd82 SHA256: 07d863d3d2e285d60fea211081da980090291156c17f582d1799dcd008415506 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-wheezy --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze -d squeeze-backports -d wheezy-lts -B reference-chroot-metadata.dat --apt emboss=6.4.0-2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.93 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --scriptsdir /etc/piuparts/scripts-wheezy --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze -d squeeze-backports -d wheezy-lts -B reference-chroot-metadata.dat --apt emboss=6.4.0-2 0m0.0s INFO: Running on: Linux piu-slave-bm-a 4.9.0-8-amd64 #1 SMP Debian 4.9.110-3+deb9u6 (2018-10-08) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpMdRgDB 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpMdRgDB 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m2.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m2.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/proc'] 0m2.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/proc'] 0m2.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/pts'] 0m2.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/pts'] 0m2.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/ptmx'] 0m2.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/ptmx'] 0m2.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/console'] 0m2.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/console'] 0m2.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/shm'] 0m2.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/shm'] 0m2.3s DEBUG: sources.list: deb http://archive.debian.org/debian squeeze main 0m2.3s DEBUG: Created policy-rc.d and chmodded it. 0m2.3s DEBUG: Created resolv.conf. 0m2.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpMdRgDB/tmp/scripts/ 0m2.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts-wheezy to /srv/piuparts.debian.org/tmp/tmpMdRgDB/tmp/scripts/ 0m2.3s INFO: Running scripts post_chroot_unpack 0m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.4s DUMP: Creating /etc/apt/apt.conf.d/unauthenticated-squeeze ... # The squeeze signing key has expired. APT::Get::AllowUnauthenticated "true"; # The Release file is not getting updated. Acquire::Check-Valid-Until "false"; 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'update'] 0m4.4s DUMP: Get:1 http://archive.debian.org squeeze Release.gpg [1655 B] Ign http://archive.debian.org/debian/ squeeze/main Translation-en Get:2 http://archive.debian.org squeeze Release [96.0 kB] Ign http://archive.debian.org squeeze Release Get:3 http://archive.debian.org squeeze/main amd64 Packages [8370 kB] Fetched 8468 kB in 1s (6807 kB/s) Reading package lists... W: GPG error: http://archive.debian.org squeeze Release: The following signatures were invalid: KEYEXPIRED 1520281423 KEYEXPIRED 1501892461 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'update'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-yf', 'dist-upgrade'] 0m4.9s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-yf', 'dist-upgrade'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.3s DUMP: 6a0e4d3b374fdc6be02fc5f39fbf3166 - 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.3s INFO: Running scripts post_setup 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_dummy_users'] 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_dummy_users'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_experimental'] 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_experimental'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_forbid_home'] 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_forbid_home'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_minimize'] 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_minimize'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m7.3s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! adduser ucf Authentication warning overridden. Get:1 http://archive.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://archive.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (3199 kB/s) Selecting previously deselected package adduser. (Reading database ... 6138 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_zz_backports'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_setup_zz_backports'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.4s DUMP: install ok installed adduser 3.112+nmu2 install ok installed apt 0.8.10.3+squeeze1 install ok installed base-files 6.0squeeze10 install ok installed base-passwd 3.5.22 install ok installed bash 4.1-3 install ok installed bsdutils 1:2.17.2-9 install ok installed coreutils 8.5-1 install ok installed dash 0.5.5.1-7.4 install ok installed debconf 1.5.36.1 install ok installed debconf-i18n 1.5.36.1 install ok installed debian-archive-keyring 2010.08.28+squeeze1 install ok installed debianutils 3.4 install ok installed diffutils 1:3.0-1 install ok installed dpkg 1.15.11 install ok installed e2fslibs 1.41.12-4stable1 install ok installed e2fsprogs 1.41.12-4stable1 install ok installed findutils 4.4.2-1+b1 install ok installed gcc-4.4-base 4.4.5-8 install ok installed gnupg 1.4.10-4+squeeze4 install ok installed gpgv 1.4.10-4+squeeze4 install ok installed grep 2.6.3-3+squeeze1 install ok installed gzip 1.3.12-9+squeeze1 install ok installed hostname 3.04 install ok installed initscripts 2.88dsf-13.1+squeeze1 install ok installed insserv 1.14.0-2 install ok installed libacl1 2.2.49-4 install ok installed libattr1 1:2.4.44-2 install ok installed libblkid1 2.17.2-9 install ok installed libbz2-1.0 1.0.5-6+squeeze1 install ok installed libc-bin 2.11.3-4 install ok installed libc6 2.11.3-4 install ok installed libcomerr2 1.41.12-4stable1 install ok installed libdb4.8 4.8.30-2 install ok installed libgcc1 1:4.4.5-8 install ok installed liblocale-gettext-perl 1.05-6 install ok installed liblzma2 5.0.0-2 install ok installed libncurses5 5.7+20100313-5 install ok installed libpam-modules 1.1.1-6.1+squeeze1 install ok installed libpam-runtime 1.1.1-6.1+squeeze1 install ok installed libpam0g 1.1.1-6.1+squeeze1 install ok installed libreadline6 6.1-3 install ok installed libselinux1 2.0.96-1 install ok installed libsepol1 2.0.41-1 install ok installed libslang2 2.2.2-4 install ok installed libss2 1.41.12-4stable1 install ok installed libstdc++6 4.4.5-8 install ok installed libtext-charwidth-perl 0.04-6 install ok installed libtext-iconv-perl 1.7-2 install ok installed libtext-wrapi18n-perl 0.06-7 install ok installed libusb-0.1-4 2:0.1.12-16 install ok installed libuuid1 2.17.2-9 install ok installed login 1:4.1.4.2+svn3283-2+squeeze1 install ok installed lsb-base 3.2-23.2squeeze1 install ok installed mawk 1.3.3-15 install ok installed mount 2.17.2-9 install ok installed ncurses-base 5.7+20100313-5 install ok installed ncurses-bin 5.7+20100313-5 install ok installed passwd 1:4.1.4.2+svn3283-2+squeeze1 install ok installed perl-base 5.10.1-17squeeze6 install ok installed readline-common 6.1-3 install ok installed sed 4.2.1-7 install ok installed sensible-utils 0.0.4 install ok installed sysv-rc 2.88dsf-13.1+squeeze1 install ok installed sysvinit 2.88dsf-13.1+squeeze1 install ok installed sysvinit-utils 2.88dsf-13.1+squeeze1 install ok installed tar 1.23-3 install ok installed tzdata 2014e-0squeeze1 install ok installed ucf 3.0025+nmu1 install ok installed util-linux 2.17.2-9 install ok installed xz-utils 5.0.0-2 install ok installed zlib1g 1:1.2.3.4.dfsg-3 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.4s DEBUG: Loading chroot meta data from reference-chroot-metadata.dat 0m8.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 0m9.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 0m9.3s INFO: Running scripts is_testable 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/is_testable_uninstallable'] 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/is_testable_uninstallable'] 0m9.4s INFO: Running scripts pre_test 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_test_exceptions'] 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_test_exceptions'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_test_root_password'] 0m9.4s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_test_root_password'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 0m9.5s DUMP: Package: emboss Priority: optional Section: science Installed-Size: 3788 Maintainer: Debian Med Packaging Team Architecture: amd64 Version: 6.1.0-5 Depends: emboss-lib, libajax6, libc6 (>= 2.7), libfreetype6 (>= 2.2.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libjpeg62, libnucleus6, libpng12-0 (>= 1.2.13-4), libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.1.0-5), csh | c-shell Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Filename: pool/main/e/emboss/emboss_6.1.0-5_amd64.deb Size: 932220 MD5sum: 3ed3129a5af9cab88bcb5a9451ef819d SHA1: 3c132e05590c6d6fb68b1e3adc1da73618f5cfc5 SHA256: bd8f8be2c6370065481c124486bde946a8cef66971d76a28e47a662f1476fb7b Description: the european molecular biology open software suite EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages. Homepage: http://emboss.sourceforge.net Tag: field::{biology,biology:bioinformatics,biology:molecular}, implemented-in::c, interface::commandline, role::program, scope::suite, use::{analysing,comparing,converting,editing,organizing,searching,text-formatting,typesetting,viewing}, works-with::db, works-with-format::plaintext 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 0m9.5s INFO: apt-cache knows about the following packages: emboss 0m9.5s INFO: Running scripts pre_install 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_database-server'] 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_database-server'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_exceptions'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_exceptions'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_extras'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_extras'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy'] 0m9.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://archive.debian.org/debian/ squeeze/main amd64 Packages origin archive.debian.org Pinned packages: 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy', 'emboss'] 0m9.7s DUMP: emboss: Installed: (none) Candidate: 6.1.0-5 Version table: 6.1.0-5 0 500 http://archive.debian.org/debian/ squeeze/main amd64 Packages 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy', 'emboss'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-y', 'install', 'emboss'] 0m12.3s DUMP: Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: csh emboss-data emboss-lib libajax6 libfreetype6 libgd2-noxpm libjpeg62 libnucleus6 libpng12-0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 Suggested packages: emboss-doc emboss-test embassy clustalw libgd-tools Recommended packages: primer3 dialign The following NEW packages will be installed: csh emboss emboss-data emboss-lib libajax6 libfreetype6 libgd2-noxpm libjpeg62 libnucleus6 libpng12-0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. Need to get 5550 kB of archives. After this operation, 19.2 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! csh emboss-lib libajax6 libfreetype6 libjpeg62 libpng12-0 libgd2-noxpm libnucleus6 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 emboss-data emboss Authentication warning overridden. Get:1 http://archive.debian.org/debian/ squeeze/main csh amd64 20070713-2 [257 kB] Get:2 http://archive.debian.org/debian/ squeeze/main emboss-lib amd64 6.1.0-5 [449 kB] Get:3 http://archive.debian.org/debian/ squeeze/main libajax6 amd64 6.1.0-5 [875 kB] Get:4 http://archive.debian.org/debian/ squeeze/main libfreetype6 amd64 2.4.2-2.1+squeeze4 [377 kB] Get:5 http://archive.debian.org/debian/ squeeze/main libjpeg62 amd64 6b1-1 [94.0 kB] Get:6 http://archive.debian.org/debian/ squeeze/main libpng12-0 amd64 1.2.44-1+squeeze4 [180 kB] Get:7 http://archive.debian.org/debian/ squeeze/main libgd2-noxpm amd64 2.0.36~rc1~dfsg-5 [229 kB] Get:8 http://archive.debian.org/debian/ squeeze/main libnucleus6 amd64 6.1.0-5 [211 kB] Get:9 http://archive.debian.org/debian/ squeeze/main libxau6 amd64 1:1.0.6-1 [16.8 kB] Get:10 http://archive.debian.org/debian/ squeeze/main libxdmcp6 amd64 1:1.0.3-2 [19.3 kB] Get:11 http://archive.debian.org/debian/ squeeze/main libxcb1 amd64 1.6-1+squeeze1 [44.3 kB] Get:12 http://archive.debian.org/debian/ squeeze/main libx11-data all 2:1.3.3-4+squeeze1 [184 kB] Get:13 http://archive.debian.org/debian/ squeeze/main libx11-6 amd64 2:1.3.3-4+squeeze1 [847 kB] Get:14 http://archive.debian.org/debian/ squeeze/main emboss-data all 6.1.0-5 [834 kB] Get:15 http://archive.debian.org/debian/ squeeze/main emboss amd64 6.1.0-5 [932 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5550 kB in 0s (17.5 MB/s) Selecting previously deselected package csh. (Reading database ... 6261 files and directories currently installed.) Unpacking csh (from .../csh_20070713-2_amd64.deb) ... Selecting previously deselected package emboss-lib. Unpacking emboss-lib (from .../emboss-lib_6.1.0-5_amd64.deb) ... Selecting previously deselected package libajax6. Unpacking libajax6 (from .../libajax6_6.1.0-5_amd64.deb) ... Selecting previously deselected package libfreetype6. Unpacking libfreetype6 (from .../libfreetype6_2.4.2-2.1+squeeze4_amd64.deb) ... Selecting previously deselected package libjpeg62. Unpacking libjpeg62 (from .../libjpeg62_6b1-1_amd64.deb) ... Selecting previously deselected package libpng12-0. Unpacking libpng12-0 (from .../libpng12-0_1.2.44-1+squeeze4_amd64.deb) ... Selecting previously deselected package libgd2-noxpm. Unpacking libgd2-noxpm (from .../libgd2-noxpm_2.0.36~rc1~dfsg-5_amd64.deb) ... Selecting previously deselected package libnucleus6. Unpacking libnucleus6 (from .../libnucleus6_6.1.0-5_amd64.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.6-1_amd64.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.3-2_amd64.deb) ... Selecting previously deselected package libxcb1. Unpacking libxcb1 (from .../libxcb1_1.6-1+squeeze1_amd64.deb) ... Selecting previously deselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.3.3-4+squeeze1_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.3.3-4+squeeze1_amd64.deb) ... Selecting previously deselected package emboss-data. Unpacking emboss-data (from .../emboss-data_6.1.0-5_all.deb) ... Selecting previously deselected package emboss. Unpacking emboss (from .../emboss_6.1.0-5_amd64.deb) ... Setting up csh (20070713-2) ... update-alternatives: using /bin/bsd-csh to provide /bin/csh (csh) in auto mode. Setting up emboss-lib (6.1.0-5) ... Setting up libajax6 (6.1.0-5) ... Setting up libfreetype6 (2.4.2-2.1+squeeze4) ... Setting up libjpeg62 (6b1-1) ... Setting up libpng12-0 (1.2.44-1+squeeze4) ... Setting up libgd2-noxpm (2.0.36~rc1~dfsg-5) ... Setting up libnucleus6 (6.1.0-5) ... Setting up libxau6 (1:1.0.6-1) ... Setting up libxdmcp6 (1:1.0.3-2) ... Setting up libxcb1 (1.6-1+squeeze1) ... Setting up libx11-data (2:1.3.3-4+squeeze1) ... Setting up libx11-6 (2:1.3.3-4+squeeze1) ... Setting up emboss-data (6.1.0-5) ... Setting up emboss (6.1.0-5) ... 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-y', 'install', 'emboss'] 0m12.3s INFO: Running scripts post_install 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_install_exceptions'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_install_exceptions'] 0m12.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 0m13.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 0m13.7s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpMdRgDB to squeeze-backports 0m13.7s DEBUG: sources.list: deb http://archive.debian.org/debian squeeze main deb http://archive.debian.org/debian-backports squeeze-backports main 0m13.7s INFO: Running scripts pre_distupgrade 0m13.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m13.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m13.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_exceptions'] 0m13.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_exceptions'] 0m13.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m13.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m13.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_wheezy'] 0m13.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_wheezy'] 0m13.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m13.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m13.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'update'] 0m15.1s DUMP: Get:1 http://archive.debian.org squeeze Release.gpg [1655 B] Ign http://archive.debian.org/debian/ squeeze/main Translation-en Get:2 http://archive.debian.org squeeze-backports Release.gpg [819 B] Ign http://archive.debian.org/debian-backports/ squeeze-backports/main Translation-en Get:3 http://archive.debian.org squeeze Release [96.0 kB] Get:4 http://archive.debian.org squeeze-backports Release [129 kB] Ign http://archive.debian.org squeeze Release Hit http://archive.debian.org squeeze/main amd64 Packages Get:5 http://archive.debian.org squeeze-backports/main amd64 Packages [456 kB] Fetched 587 kB in 0s (2781 kB/s) Reading package lists... W: GPG error: http://archive.debian.org squeeze Release: The following signatures were invalid: KEYEXPIRED 1520281423 KEYEXPIRED 1501892461 0m15.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'update'] 0m15.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-yf', 'dist-upgrade'] 0m15.5s DUMP: Reading package lists... Building dependency tree... Reading state information... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-yf', 'dist-upgrade'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m16.0s DUMP: eadd89c8cae8cf83c8e9abc8680b279a - 0m16.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m16.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 0m16.0s DUMP: Package: emboss Priority: optional Section: science Installed-Size: 3788 Maintainer: Debian Med Packaging Team Architecture: amd64 Version: 6.1.0-5 Depends: emboss-lib, libajax6, libc6 (>= 2.7), libfreetype6 (>= 2.2.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libjpeg62, libnucleus6, libpng12-0 (>= 1.2.13-4), libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.1.0-5), csh | c-shell Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Filename: pool/main/e/emboss/emboss_6.1.0-5_amd64.deb Size: 932220 MD5sum: 3ed3129a5af9cab88bcb5a9451ef819d SHA1: 3c132e05590c6d6fb68b1e3adc1da73618f5cfc5 SHA256: bd8f8be2c6370065481c124486bde946a8cef66971d76a28e47a662f1476fb7b Description: the european molecular biology open software suite EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages. Homepage: http://emboss.sourceforge.net Tag: field::{biology,biology:bioinformatics,biology:molecular}, implemented-in::c, interface::commandline, role::program, scope::suite, use::{analysing,comparing,converting,editing,organizing,searching,text-formatting,typesetting,viewing}, works-with::db, works-with-format::plaintext 0m16.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 0m16.0s INFO: apt-cache knows about the following packages: emboss 0m16.0s INFO: Running scripts pre_install 0m16.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_database-server'] 0m16.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_database-server'] 0m16.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_exceptions'] 0m16.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_exceptions'] 0m16.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_extras'] 0m16.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_extras'] 0m16.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture'] 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy'] 0m16.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 100 http://archive.debian.org/debian-backports/ squeeze-backports/main amd64 Packages release o=Debian Backports,a=squeeze-backports,n=squeeze-backports,l=Debian Backports,c=main origin archive.debian.org 500 http://archive.debian.org/debian/ squeeze/main amd64 Packages origin archive.debian.org Pinned packages: 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy', 'emboss'] 0m16.2s DUMP: emboss: Installed: 6.1.0-5 Candidate: 6.1.0-5 Version table: 6.3.1-6~bpo60+1 0 100 http://archive.debian.org/debian-backports/ squeeze-backports/main amd64 Packages *** 6.1.0-5 0 500 http://archive.debian.org/debian/ squeeze/main amd64 Packages 100 /var/lib/dpkg/status 0m16.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy', 'emboss'] 0m16.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-y', '-t', 'squeeze-backports', 'install', 'emboss'] 0m20.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: csh Use 'apt-get autoremove' to remove them. The following extra packages will be installed: emboss-data emboss-lib libexpat1 libgcrypt11 libgnutls26 libgpg-error0 libgssapi-krb5-2 libhpdf-2.1.0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libmysqlclient16 libpq5 libsasl2-2 libssl0.9.8 libtasn1-3 mysql-common Suggested packages: emboss-doc emboss-test embassy clustalw rng-tools gnutls-bin krb5-doc krb5-user Recommended packages: primer3 dialign libsasl2-modules The following packages will be REMOVED: libajax6 libnucleus6 The following NEW packages will be installed: libexpat1 libgcrypt11 libgnutls26 libgpg-error0 libgssapi-krb5-2 libhpdf-2.1.0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libmysqlclient16 libpq5 libsasl2-2 libssl0.9.8 libtasn1-3 mysql-common The following packages will be upgraded: emboss emboss-data emboss-lib 3 upgraded, 17 newly installed, 2 to remove and 2 not upgraded. Need to get 11.1 MB of archives. After this operation, 23.1 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! emboss libexpat1 libhpdf-2.1.0 mysql-common libmysqlclient16 libkeyutils1 libkrb5support0 libk5crypto3 libkrb5-3 libgssapi-krb5-2 libgpg-error0 libgcrypt11 libtasn1-3 libgnutls26 libsasl2-2 libldap-2.4-2 libssl0.9.8 libpq5 emboss-lib emboss-data Authentication warning overridden. Get:1 http://archive.debian.org/debian-backports/ squeeze-backports/main emboss amd64 6.3.1-6~bpo60+1 [1005 kB] Get:2 http://archive.debian.org/debian/ squeeze/main libexpat1 amd64 2.0.1-7+squeeze1 [138 kB] Get:3 http://archive.debian.org/debian/ squeeze/main libhpdf-2.1.0 amd64 2.1.0+dfsg-1 [498 kB] Get:4 http://archive.debian.org/debian/ squeeze/main mysql-common all 5.1.73-1 [71.2 kB] Get:5 http://archive.debian.org/debian/ squeeze/main libmysqlclient16 amd64 5.1.73-1 [1971 kB] Get:6 http://archive.debian.org/debian-backports/ squeeze-backports/main libkeyutils1 amd64 1.5.2-2~bpo60+1 [8970 B] Get:7 http://archive.debian.org/debian/ squeeze/main libkrb5support0 amd64 1.8.3+dfsg-4squeeze7 [46.5 kB] Get:8 http://archive.debian.org/debian/ squeeze/main libk5crypto3 amd64 1.8.3+dfsg-4squeeze7 [106 kB] Get:9 http://archive.debian.org/debian/ squeeze/main libkrb5-3 amd64 1.8.3+dfsg-4squeeze7 [374 kB] Get:10 http://archive.debian.org/debian/ squeeze/main libgssapi-krb5-2 amd64 1.8.3+dfsg-4squeeze7 [131 kB] Get:11 http://archive.debian.org/debian/ squeeze/main libgpg-error0 amd64 1.6-1 [43.9 kB] Get:12 http://archive.debian.org/debian/ squeeze/main libgcrypt11 amd64 1.4.5-2+squeeze1 [282 kB] Get:13 http://archive.debian.org/debian/ squeeze/main libtasn1-3 amd64 2.7-1+squeeze+1 [63.1 kB] Get:14 http://archive.debian.org/debian/ squeeze/main libgnutls26 amd64 2.8.6-1+squeeze3 [564 kB] Get:15 http://archive.debian.org/debian/ squeeze/main libsasl2-2 amd64 2.1.23.dfsg1-7 [115 kB] Get:16 http://archive.debian.org/debian/ squeeze/main libldap-2.4-2 amd64 2.4.23-7.3 [211 kB] Get:17 http://archive.debian.org/debian/ squeeze/main libssl0.9.8 amd64 0.9.8o-4squeeze14 [1002 kB] Get:18 http://archive.debian.org/debian-backports/ squeeze-backports/main libpq5 amd64 9.1.15-0+deb7u1~bpo60+1 [138 kB] Get:19 http://archive.debian.org/debian-backports/ squeeze-backports/main emboss-lib amd64 6.3.1-6~bpo60+1 [3428 kB] Get:20 http://archive.debian.org/debian-backports/ squeeze-backports/main emboss-data all 6.3.1-6~bpo60+1 [876 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 11.1 MB in 0s (22.4 MB/s) (Reading database ... 7920 files and directories currently installed.) Preparing to replace emboss 6.1.0-5 (using .../emboss_6.3.1-6~bpo60+1_amd64.deb) ... Unpacking replacement emboss ... (Reading database ... 7936 files and directories currently installed.) Removing libnucleus6 ... Selecting previously deselected package libexpat1. (Reading database ... 7930 files and directories currently installed.) Unpacking libexpat1 (from .../libexpat1_2.0.1-7+squeeze1_amd64.deb) ... Selecting previously deselected package libhpdf-2.1.0. Unpacking libhpdf-2.1.0 (from .../libhpdf-2.1.0_2.1.0+dfsg-1_amd64.deb) ... Selecting previously deselected package mysql-common. Unpacking mysql-common (from .../mysql-common_5.1.73-1_all.deb) ... Selecting previously deselected package libmysqlclient16. Unpacking libmysqlclient16 (from .../libmysqlclient16_5.1.73-1_amd64.deb) ... Selecting previously deselected package libkeyutils1. Unpacking libkeyutils1 (from .../libkeyutils1_1.5.2-2~bpo60+1_amd64.deb) ... Selecting previously deselected package libkrb5support0. Unpacking libkrb5support0 (from .../libkrb5support0_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libk5crypto3. Unpacking libk5crypto3 (from .../libk5crypto3_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libkrb5-3. Unpacking libkrb5-3 (from .../libkrb5-3_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libgssapi-krb5-2. Unpacking libgssapi-krb5-2 (from .../libgssapi-krb5-2_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libgpg-error0. Unpacking libgpg-error0 (from .../libgpg-error0_1.6-1_amd64.deb) ... Selecting previously deselected package libgcrypt11. Unpacking libgcrypt11 (from .../libgcrypt11_1.4.5-2+squeeze1_amd64.deb) ... Selecting previously deselected package libtasn1-3. Unpacking libtasn1-3 (from .../libtasn1-3_2.7-1+squeeze+1_amd64.deb) ... Selecting previously deselected package libgnutls26. Unpacking libgnutls26 (from .../libgnutls26_2.8.6-1+squeeze3_amd64.deb) ... Selecting previously deselected package libsasl2-2. Unpacking libsasl2-2 (from .../libsasl2-2_2.1.23.dfsg1-7_amd64.deb) ... Selecting previously deselected package libldap-2.4-2. Unpacking libldap-2.4-2 (from .../libldap-2.4-2_2.4.23-7.3_amd64.deb) ... Selecting previously deselected package libssl0.9.8. Unpacking libssl0.9.8 (from .../libssl0.9.8_0.9.8o-4squeeze14_amd64.deb) ... Selecting previously deselected package libpq5. Unpacking libpq5 (from .../libpq5_9.1.15-0+deb7u1~bpo60+1_amd64.deb) ... (Reading database ... 8127 files and directories currently installed.) Removing libajax6 ... (Reading database ... 8119 files and directories currently installed.) Preparing to replace emboss-lib 6.1.0-5 (using .../emboss-lib_6.3.1-6~bpo60+1_amd64.deb) ... Unpacking replacement emboss-lib ... Preparing to replace emboss-data 6.1.0-5 (using .../emboss-data_6.3.1-6~bpo60+1_all.deb) ... Unpacking replacement emboss-data ... Setting up libexpat1 (2.0.1-7+squeeze1) ... Setting up libhpdf-2.1.0 (2.1.0+dfsg-1) ... Setting up mysql-common (5.1.73-1) ... Setting up libmysqlclient16 (5.1.73-1) ... Setting up libkeyutils1 (1.5.2-2~bpo60+1) ... Setting up libkrb5support0 (1.8.3+dfsg-4squeeze7) ... Setting up libk5crypto3 (1.8.3+dfsg-4squeeze7) ... Setting up libkrb5-3 (1.8.3+dfsg-4squeeze7) ... Setting up libgssapi-krb5-2 (1.8.3+dfsg-4squeeze7) ... Setting up libgpg-error0 (1.6-1) ... Setting up libgcrypt11 (1.4.5-2+squeeze1) ... Setting up libtasn1-3 (2.7-1+squeeze+1) ... Setting up libgnutls26 (2.8.6-1+squeeze3) ... Setting up libsasl2-2 (2.1.23.dfsg1-7) ... Setting up libldap-2.4-2 (2.4.23-7.3) ... Setting up libssl0.9.8 (0.9.8o-4squeeze14) ... Setting up libpq5 (9.1.15-0+deb7u1~bpo60+1) ... Setting up emboss-lib (6.3.1-6~bpo60+1) ... Setting up emboss-data (6.3.1-6~bpo60+1) ... Setting up emboss (6.3.1-6~bpo60+1) ... 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-y', '-t', 'squeeze-backports', 'install', 'emboss'] 0m20.2s INFO: Running scripts post_install 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_install_exceptions'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_install_exceptions'] 0m20.2s INFO: Running scripts post_distupgrade 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_exceptions'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_exceptions'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_experimental'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_experimental'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_hack_debsums'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_hack_debsums'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m21.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: csh Use 'apt-get autoremove' to remove them. Suggested packages: bootchart The following packages will be upgraded: insserv 1 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. Need to get 71.3 kB of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! insserv Authentication warning overridden. Get:1 http://archive.debian.org/debian-backports/ squeeze-backports/main insserv amd64 1.14.0-2.2~bpo60+1 [71.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 71.3 kB in 0s (1079 kB/s) (Reading database ... 8318 files and directories currently installed.) Preparing to replace insserv 1.14.0-2 (using .../insserv_1.14.0-2.2~bpo60+1_amd64.deb) ... Unpacking replacement insserv ... Setting up insserv (1.14.0-2.2~bpo60+1) ... Installing new version of config file /etc/insserv.conf ... 0m21.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m21.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_zz_backports'] 0m21.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_zz_backports'] 0m21.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 0m22.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 0m22.6s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpMdRgDB to wheezy-lts 0m22.6s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ wheezy main deb http://security.debian.org wheezy/updates main 0m22.6s INFO: Running scripts pre_distupgrade 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m22.6s DUMP: removed `/etc/apt/apt.conf.d/unauthenticated-squeeze' 0m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_exceptions'] 0m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_exceptions'] 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_wheezy'] 0m22.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_wheezy'] 0m22.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m22.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m22.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m22.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m22.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'update'] 0m25.1s DUMP: Get:1 http://mirror.bm.debian.org wheezy Release.gpg [2373 B] Ign http://mirror.bm.debian.org/debian/ wheezy/main Translation-en Get:2 http://mirror.bm.debian.org wheezy Release [191 kB] Get:3 http://mirror.bm.debian.org wheezy/main amd64 Packages [7634 kB] Get:4 http://security.debian.org wheezy/updates Release.gpg [1601 B] Ign http://security.debian.org/ wheezy/updates/main Translation-en Get:5 http://security.debian.org wheezy/updates Release [52.3 kB] Get:6 http://security.debian.org wheezy/updates/main amd64 Packages [743 kB] Fetched 8624 kB in 1s (7656 kB/s) Reading package lists... W: There is no public key available for the following key IDs: 7638D0442B90D010 W: There is no public key available for the following key IDs: 9D6D8F6BC857C906 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'update'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-yf', 'dist-upgrade'] 1m3.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: gcc-4.7-base libapt-pkg4.12 libbsd0 libdb5.1 libhpdf-2.2.1 libjpeg8 liblzma5 libmount1 libmysqlclient18 libp11-kit0 libpam-modules-bin libsemanage-common libsemanage1 libssl1.0.0 libtinfo5 libustr-1.0-1 multiarch-support The following packages will be upgraded: adduser apt base-files base-passwd bash bsdutils coreutils csh dash debconf debconf-i18n debian-archive-keyring debianutils diffutils dpkg e2fslibs e2fsprogs emboss emboss-data emboss-lib findutils gcc-4.4-base gnupg gpgv grep gzip hostname initscripts insserv libacl1 libattr1 libblkid1 libbz2-1.0 libc-bin libc6 libcomerr2 libexpat1 libfreetype6 libgcc1 libgcrypt11 libgd2-noxpm libgnutls26 libgpg-error0 libgssapi-krb5-2 libjpeg62 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 liblocale-gettext-perl libncurses5 libpam-modules libpam-runtime libpam0g libpng12-0 libpq5 libreadline6 libsasl2-2 libselinux1 libsepol1 libslang2 libss2 libstdc++6 libtasn1-3 libtext-charwidth-perl libtext-iconv-perl libusb-0.1-4 libuuid1 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 login lsb-base mawk mount mysql-common ncurses-base ncurses-bin passwd perl-base readline-common sed sensible-utils sysv-rc sysvinit sysvinit-utils tar tzdata ucf util-linux xz-utils zlib1g 95 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. Need to get 86.7 MB of archives. After this operation, 315 MB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ wheezy/main debianutils amd64 4.3.2 [78.9 kB] Get:2 http://mirror.bm.debian.org/debian/ wheezy/main gcc-4.7-base amd64 4.7.2-5 [144 kB] Get:3 http://mirror.bm.debian.org/debian/ wheezy/main libgcc1 amd64 1:4.7.2-5 [43.1 kB] Get:4 http://mirror.bm.debian.org/debian/ wheezy/main libsemanage-common all 2.1.6-6 [23.2 kB] Get:5 http://mirror.bm.debian.org/debian/ wheezy/main libsepol1 amd64 2.1.4-3 [135 kB] Get:6 http://mirror.bm.debian.org/debian/ wheezy/main libustr-1.0-1 amd64 1.0.4-3 [92.5 kB] Get:7 http://mirror.bm.debian.org/debian/ wheezy/main libbz2-1.0 amd64 1.0.6-4 [46.5 kB] Get:8 http://mirror.bm.debian.org/debian/ wheezy/main libselinux1 amd64 2.1.9-5 [90.6 kB] Get:9 http://mirror.bm.debian.org/debian/ wheezy/main libsemanage1 amd64 2.1.6-6 [102 kB] Get:10 http://mirror.bm.debian.org/debian/ wheezy/main debconf all 1.5.49 [171 kB] Get:11 http://mirror.bm.debian.org/debian/ wheezy/main libpam0g amd64 1.1.3-7.1 [128 kB] Get:12 http://mirror.bm.debian.org/debian/ wheezy/main libpam-modules-bin amd64 1.1.3-7.1 [113 kB] Get:13 http://mirror.bm.debian.org/debian/ wheezy/main libpam-modules amd64 1.1.3-7.1 [348 kB] Get:14 http://mirror.bm.debian.org/debian/ wheezy/main libuuid1 amd64 2.20.1-5.3 [57.1 kB] Get:15 http://mirror.bm.debian.org/debian/ wheezy/main libblkid1 amd64 2.20.1-5.3 [120 kB] Get:16 http://mirror.bm.debian.org/debian/ wheezy/main libslang2 amd64 2.2.4-15 [551 kB] Get:17 http://security.debian.org/ wheezy/updates/main sensible-utils all 0.0.7+deb7u1 [9000 B] Get:18 http://security.debian.org/ wheezy/updates/main libc-bin amd64 2.13-38+deb7u12 [1275 kB] Get:19 http://mirror.bm.debian.org/debian/ wheezy/main libtinfo5 amd64 5.9-10 [275 kB] Get:20 http://mirror.bm.debian.org/debian/ wheezy/main lsb-base all 4.1+Debian8+deb7u1 [26.8 kB] Get:21 http://mirror.bm.debian.org/debian/ wheezy/main liblzma5 amd64 5.1.1alpha+20120614-2 [202 kB] Get:22 http://mirror.bm.debian.org/debian/ wheezy/main dpkg amd64 1.16.18 [2665 kB] Get:23 http://mirror.bm.debian.org/debian/ wheezy/main util-linux amd64 2.20.1-5.3 [659 kB] Get:24 http://mirror.bm.debian.org/debian/ wheezy/main insserv amd64 1.14.0-5 [64.8 kB] Get:25 http://mirror.bm.debian.org/debian/ wheezy/main sysvinit-utils amd64 2.88dsf-41+deb7u1 [100 kB] Get:26 http://mirror.bm.debian.org/debian/ wheezy/main sysv-rc all 2.88dsf-41+deb7u1 [81.8 kB] Get:27 http://mirror.bm.debian.org/debian/ wheezy/main libmount1 amd64 2.20.1-5.3 [120 kB] Get:28 http://mirror.bm.debian.org/debian/ wheezy/main mount amd64 2.20.1-5.3 [213 kB] Get:29 http://mirror.bm.debian.org/debian/ wheezy/main libattr1 amd64 1:2.4.46-8 [19.8 kB] Get:30 http://mirror.bm.debian.org/debian/ wheezy/main libacl1 amd64 2.2.51-8 [30.1 kB] Get:31 http://mirror.bm.debian.org/debian/ wheezy/main coreutils amd64 8.13-3.5 [5628 kB] Get:32 http://security.debian.org/ wheezy/updates/main libc6 amd64 2.13-38+deb7u12 [4226 kB] Get:33 http://security.debian.org/ wheezy/updates/main multiarch-support amd64 2.13-38+deb7u12 [152 kB] Get:34 http://security.debian.org/ wheezy/updates/main libdb5.1 amd64 5.1.29-5+deb7u1 [723 kB] Get:35 http://security.debian.org/ wheezy/updates/main passwd amd64 1:4.1.5.1-1+deb7u1 [1262 kB] Get:36 http://mirror.bm.debian.org/debian/ wheezy/main initscripts amd64 2.88dsf-41+deb7u1 [91.8 kB] Get:37 http://mirror.bm.debian.org/debian/ wheezy/main base-files amd64 7.1wheezy11 [67.1 kB] Get:38 http://mirror.bm.debian.org/debian/ wheezy/main dash amd64 0.5.7-3 [113 kB] Get:39 http://mirror.bm.debian.org/debian/ wheezy/main diffutils amd64 1:3.2-6 [366 kB] Get:40 http://mirror.bm.debian.org/debian/ wheezy/main libcomerr2 amd64 1.42.5-1.1+deb7u1 [56.1 kB] Get:41 http://mirror.bm.debian.org/debian/ wheezy/main e2fslibs amd64 1.42.5-1.1+deb7u1 [197 kB] Get:42 http://mirror.bm.debian.org/debian/ wheezy/main e2fsprogs amd64 1.42.5-1.1+deb7u1 [979 kB] Get:43 http://security.debian.org/ wheezy/updates/main tzdata all 2018e-0+deb7u1 [496 kB] Get:44 http://security.debian.org/ wheezy/updates/main bash amd64 4.2+dfsg-0.1+deb7u4 [1499 kB] Get:45 http://mirror.bm.debian.org/debian/ wheezy/main findutils amd64 4.4.2-4 [694 kB] Get:46 http://security.debian.org/ wheezy/updates/main login amd64 1:4.1.5.1-1+deb7u1 [984 kB] Get:47 http://mirror.bm.debian.org/debian/ wheezy/main grep amd64 2.12-2 [454 kB] Get:48 http://security.debian.org/ wheezy/updates/main perl-base amd64 5.14.2-21+deb7u6 [1534 kB] Get:49 http://security.debian.org/ wheezy/updates/main tar amd64 1.26+dfsg-0.1+deb7u1 [984 kB] Get:50 http://mirror.bm.debian.org/debian/ wheezy/main gzip amd64 1.5-1.1 [119 kB] Get:51 http://security.debian.org/ wheezy/updates/main gpgv amd64 1.4.12-7+deb7u9 [229 kB] Get:52 http://mirror.bm.debian.org/debian/ wheezy/main hostname amd64 3.11 [15.0 kB] Get:53 http://mirror.bm.debian.org/debian/ wheezy/main ncurses-bin amd64 5.9-10 [335 kB] Get:54 http://security.debian.org/ wheezy/updates/main gnupg amd64 1.4.12-7+deb7u9 [1954 kB] Get:55 http://mirror.bm.debian.org/debian/ wheezy/main libtext-charwidth-perl amd64 0.04-7+b1 [11.2 kB] Get:56 http://mirror.bm.debian.org/debian/ wheezy/main libtext-iconv-perl amd64 1.7-5 [17.6 kB] Get:57 http://mirror.bm.debian.org/debian/ wheezy/main liblocale-gettext-perl amd64 1.05-7+b1 [20.4 kB] Get:58 http://mirror.bm.debian.org/debian/ wheezy/main sed amd64 4.2.1-10 [251 kB] Get:59 http://security.debian.org/ wheezy/updates/main libtasn1-3 amd64 2.13-2+deb7u5 [68.9 kB] Get:60 http://security.debian.org/ wheezy/updates/main libgcrypt11 amd64 1.5.0-5+deb7u6 [301 kB] Get:61 http://security.debian.org/ wheezy/updates/main libssl1.0.0 amd64 1.0.1t-1+deb7u4 [1279 kB] Get:62 http://mirror.bm.debian.org/debian/ wheezy/main sysvinit amd64 2.88dsf-41+deb7u1 [133 kB] Get:63 http://mirror.bm.debian.org/debian/ wheezy/main base-passwd amd64 3.5.26 [46.3 kB] Get:64 http://mirror.bm.debian.org/debian/ wheezy/main bsdutils amd64 1:2.20.1-5.3 [85.5 kB] Get:65 http://security.debian.org/ wheezy/updates/main libgssapi-krb5-2 amd64 1.10.1+dfsg-5+deb7u9 [150 kB] Get:66 http://mirror.bm.debian.org/debian/ wheezy/main ncurses-base all 5.9-10 [198 kB] Get:67 http://security.debian.org/ wheezy/updates/main libk5crypto3 amd64 1.10.1+dfsg-5+deb7u9 [114 kB] Get:68 http://security.debian.org/ wheezy/updates/main libkrb5-3 amd64 1.10.1+dfsg-5+deb7u9 [394 kB] Get:69 http://mirror.bm.debian.org/debian/ wheezy/main libstdc++6 amd64 4.7.2-5 [332 kB] Get:70 http://security.debian.org/ wheezy/updates/main libkrb5support0 amd64 1.10.1+dfsg-5+deb7u9 [50.7 kB] Get:71 http://security.debian.org/ wheezy/updates/main libexpat1 amd64 2.1.0-1+deb7u5 [139 kB] Get:72 http://security.debian.org/ wheezy/updates/main libfreetype6 amd64 2.4.9-1.1+deb7u7 [454 kB] Get:73 http://security.debian.org/ wheezy/updates/main libgd2-noxpm amd64 2.0.36~rc1~dfsg-6.1+deb7u11 [234 kB] Get:74 http://mirror.bm.debian.org/debian/ wheezy/main zlib1g amd64 1:1.2.7.dfsg-13 [87.4 kB] Get:75 http://security.debian.org/ wheezy/updates/main libldap-2.4-2 amd64 2.4.31-2+deb7u3 [244 kB] Get:76 http://mirror.bm.debian.org/debian/ wheezy/main debian-archive-keyring all 2014.3~deb7u1 [60.7 kB] Get:77 http://security.debian.org/ wheezy/updates/main mysql-common all 5.5.60-0+deb7u1 [75.2 kB] Get:78 http://security.debian.org/ wheezy/updates/main libmysqlclient18 amd64 5.5.60-0+deb7u1 [682 kB] Get:79 http://mirror.bm.debian.org/debian/ wheezy/main readline-common all 6.2+dfsg-0.1 [31.9 kB] Get:80 http://mirror.bm.debian.org/debian/ wheezy/main libreadline6 amd64 6.2+dfsg-0.1 [166 kB] Get:81 http://mirror.bm.debian.org/debian/ wheezy/main libusb-0.1-4 amd64 2:0.1.12-20+nmu1 [23.1 kB] Get:82 http://mirror.bm.debian.org/debian/ wheezy/main libapt-pkg4.12 amd64 0.9.7.9+deb7u7 [891 kB] Get:83 http://security.debian.org/ wheezy/updates/main libx11-6 amd64 2:1.5.0-1+deb7u4 [902 kB] Get:84 http://security.debian.org/ wheezy/updates/main libx11-data all 2:1.5.0-1+deb7u4 [189 kB] Get:85 http://security.debian.org/ wheezy/updates/main libpq5 amd64 9.1.24lts2-0+deb7u2 [141 kB] Get:86 http://mirror.bm.debian.org/debian/ wheezy/main apt amd64 0.9.7.9+deb7u7 [1262 kB] Get:87 http://mirror.bm.debian.org/debian/ wheezy/main libncurses5 amd64 5.9-10 [113 kB] Get:88 http://mirror.bm.debian.org/debian/ wheezy/main libss2 amd64 1.42.5-1.1+deb7u1 [61.4 kB] Get:89 http://mirror.bm.debian.org/debian/ wheezy/main libp11-kit0 amd64 0.12-3 [52.8 kB] Get:90 http://mirror.bm.debian.org/debian/ wheezy/main libgnutls26 amd64 2.12.20-8+deb7u5 [620 kB] Get:91 http://mirror.bm.debian.org/debian/ wheezy/main libgpg-error0 amd64 1.10-3.1 [77.9 kB] Get:92 http://mirror.bm.debian.org/debian/ wheezy/main mawk amd64 1.3.3-17 [90.8 kB] Get:93 http://mirror.bm.debian.org/debian/ wheezy/main libkeyutils1 amd64 1.5.5-3+deb7u1 [8664 B] Get:94 http://mirror.bm.debian.org/debian/ wheezy/main libsasl2-2 amd64 2.1.25.dfsg1-6+deb7u1 [120 kB] Get:95 http://mirror.bm.debian.org/debian/ wheezy/main libbsd0 amd64 0.4.2-1 [59.3 kB] Get:96 http://mirror.bm.debian.org/debian/ wheezy/main libjpeg8 amd64 8d-1+deb7u1 [138 kB] Get:97 http://mirror.bm.debian.org/debian/ wheezy/main libpng12-0 amd64 1.2.49-1+deb7u2 [191 kB] Get:98 http://mirror.bm.debian.org/debian/ wheezy/main libjpeg62 amd64 6b1-3+deb7u1 [96.9 kB] Get:99 http://mirror.bm.debian.org/debian/ wheezy/main libxau6 amd64 1:1.0.7-1 [18.8 kB] Get:100 http://mirror.bm.debian.org/debian/ wheezy/main libxdmcp6 amd64 1:1.1.1-1 [26.3 kB] Get:101 http://mirror.bm.debian.org/debian/ wheezy/main libxcb1 amd64 1.8.1-2+deb7u1 [50.2 kB] Get:102 http://mirror.bm.debian.org/debian/ wheezy/main libpam-runtime all 1.1.3-7.1 [228 kB] Get:103 http://mirror.bm.debian.org/debian/ wheezy/main xz-utils amd64 5.1.1alpha+20120614-2 [237 kB] Get:104 http://mirror.bm.debian.org/debian/ wheezy/main adduser all 3.113+nmu3 [264 kB] Get:105 http://mirror.bm.debian.org/debian/ wheezy/main debconf-i18n all 1.5.49 [237 kB] Get:106 http://mirror.bm.debian.org/debian/ wheezy/main ucf all 3.0025+nmu3 [70.8 kB] Get:107 http://mirror.bm.debian.org/debian/ wheezy/main csh amd64 20110502-2 [245 kB] Get:108 http://mirror.bm.debian.org/debian/ wheezy/main libhpdf-2.2.1 amd64 2.2.1-1 [504 kB] Get:109 http://mirror.bm.debian.org/debian/ wheezy/main emboss amd64 6.4.0-2 [1009 kB] Get:110 http://mirror.bm.debian.org/debian/ wheezy/main emboss-lib amd64 6.4.0-2 [2823 kB] Get:111 http://mirror.bm.debian.org/debian/ wheezy/main emboss-data all 6.4.0-2 [39.0 MB] Get:112 http://mirror.bm.debian.org/debian/ wheezy/main gcc-4.4-base amd64 4.4.7-2 [127 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 86.7 MB in 1s (45.5 MB/s) (Reading database ... 8318 files and directories currently installed.) Preparing to replace sensible-utils 0.0.4 (using .../sensible-utils_0.0.7+deb7u1_all.deb) ... Unpacking replacement sensible-utils ... Setting up sensible-utils (0.0.7+deb7u1) ... (Reading database ... 8330 files and directories currently installed.) Preparing to replace debianutils 3.4 (using .../debianutils_4.3.2_amd64.deb) ... Unpacking replacement debianutils ... Setting up debianutils (4.3.2) ... (Reading database ... 8356 files and directories currently installed.) Preparing to replace libc-bin 2.11.3-4 (using .../libc-bin_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-38+deb7u12) ... Installing new version of config file /etc/bindresvport.blacklist ... (Reading database ... 8373 files and directories currently installed.) Preparing to replace libc6 2.11.3-4 (using .../libc6_2.13-38+deb7u12_amd64.deb) ... Checking for services that may need to be restarted... Checking init scripts... Unpacking replacement libc6 ... Setting up libc6 (2.13-38+deb7u12) ... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. Selecting previously deselected package gcc-4.7-base. (Reading database ... 8378 files and directories currently installed.) Unpacking gcc-4.7-base (from .../gcc-4.7-base_4.7.2-5_amd64.deb) ... Setting up gcc-4.7-base (4.7.2-5) ... Selecting previously deselected package multiarch-support. (Reading database ... 8385 files and directories currently installed.) Unpacking multiarch-support (from .../multiarch-support_2.13-38+deb7u12_amd64.deb) ... Setting up multiarch-support (2.13-38+deb7u12) ... (Reading database ... 8389 files and directories currently installed.) Preparing to replace libgcc1 1:4.4.5-8 (using .../libgcc1_1%3a4.7.2-5_amd64.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.7.2-5) ... Selecting previously deselected package libsemanage-common. (Reading database ... 8389 files and directories currently installed.) 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Unpacking libdb5.1 (from .../libdb5.1_5.1.29-5+deb7u1_amd64.deb) ... Setting up libdb5.1 (5.1.29-5+deb7u1) ... Selecting previously deselected package libpam-modules-bin. (Reading database ... 8421 files and directories currently installed.) Unpacking libpam-modules-bin (from .../libpam-modules-bin_1.1.3-7.1_amd64.deb) ... Replacing files in old package libpam-modules ... Setting up libpam-modules-bin (1.1.3-7.1) ... (Reading database ... 8427 files and directories currently installed.) Preparing to replace libpam-modules 1.1.1-6.1+squeeze1 (using .../libpam-modules_1.1.3-7.1_amd64.deb) ... Unpacking replacement libpam-modules ... Setting up libpam-modules (1.1.3-7.1) ... Installing new version of config file /etc/security/group.conf ... (Reading database ... 8426 files and directories currently installed.) Preparing to replace passwd 1:4.1.4.2+svn3283-2+squeeze1 (using .../passwd_1%3a4.1.5.1-1+deb7u1_amd64.deb) ... Unpacking replacement passwd ... 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(Reading database ... 8454 files and directories currently installed.) Preparing to replace lsb-base 3.2-23.2squeeze1 (using .../lsb-base_4.1+Debian8+deb7u1_all.deb) ... Unpacking replacement lsb-base ... Setting up lsb-base (4.1+Debian8+deb7u1) ... (Reading database ... 8456 files and directories currently installed.) Preparing to replace tzdata 2014e-0squeeze1 (using .../tzdata_2018e-0+deb7u1_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2018e-0+deb7u1) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Oct 21 13:39:07 UTC 2018. Universal Time is now: Sun Oct 21 13:39:07 UTC 2018. Run 'dpkg-reconfigure tzdata' if you wish to change it. Selecting previously deselected package liblzma5. (Reading database ... 8495 files and directories currently installed.) Unpacking liblzma5 (from .../liblzma5_5.1.1alpha+20120614-2_amd64.deb) ... Setting up liblzma5 (5.1.1alpha+20120614-2) ... (Reading database ... 8504 files and directories currently installed.) 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Preparing to replace libcomerr2 1.41.12-4stable1 (using .../libcomerr2_1.42.5-1.1+deb7u1_amd64.deb) ... Unpacking replacement libcomerr2:amd64 ... Setting up libcomerr2:amd64 (1.42.5-1.1+deb7u1) ... (Reading database ... 8450 files and directories currently installed.) Preparing to replace e2fslibs 1.41.12-4stable1 (using .../e2fslibs_1.42.5-1.1+deb7u1_amd64.deb) ... Unpacking replacement e2fslibs:amd64 ... Setting up e2fslibs:amd64 (1.42.5-1.1+deb7u1) ... (Reading database ... 8450 files and directories currently installed.) Preparing to replace e2fsprogs 1.41.12-4stable1 (using .../e2fsprogs_1.42.5-1.1+deb7u1_amd64.deb) ... Unpacking replacement e2fsprogs ... Setting up e2fsprogs (1.42.5-1.1+deb7u1) ... Installing new version of config file /etc/mke2fs.conf ... (Reading database ... 8446 files and directories currently installed.) Preparing to replace findutils 4.4.2-1+b1 (using .../findutils_4.4.2-4_amd64.deb) ... Unpacking replacement findutils ... Setting up findutils (4.4.2-4) ... (Reading database ... 8446 files and directories currently installed.) Preparing to replace grep 2.6.3-3+squeeze1 (using .../archives/grep_2.12-2_amd64.deb) ... Unpacking replacement grep ... Setting up grep (2.12-2) ... (Reading database ... 8446 files and directories currently installed.) Preparing to replace gzip 1.3.12-9+squeeze1 (using .../gzip_1.5-1.1_amd64.deb) ... Unpacking replacement gzip ... Setting up gzip (1.5-1.1) ... (Reading database ... 8446 files and directories currently installed.) Preparing to replace hostname 3.04 (using .../hostname_3.11_amd64.deb) ... Unpacking replacement hostname ... Setting up hostname (3.11) ... (Reading database ... 8445 files and directories currently installed.) Preparing to replace login 1:4.1.4.2+svn3283-2+squeeze1 (using .../login_1%3a4.1.5.1-1+deb7u1_amd64.deb) ... Unpacking replacement login ... Setting up login (1:4.1.5.1-1+deb7u1) ... Installing new version of config file /etc/pam.d/login ... Installing new version of config file /etc/login.defs ... Installing new version of config file /etc/securetty ... (Reading database ... 8460 files and directories currently installed.) Preparing to replace ncurses-bin 5.7+20100313-5 (using .../ncurses-bin_5.9-10_amd64.deb) ... Unpacking replacement ncurses-bin ... Setting up ncurses-bin (5.9-10) ... (Reading database ... 8462 files and directories currently installed.) Preparing to replace libtext-charwidth-perl 0.04-6 (using .../libtext-charwidth-perl_0.04-7+b1_amd64.deb) ... Unpacking replacement libtext-charwidth-perl ... Preparing to replace libtext-iconv-perl 1.7-2 (using .../libtext-iconv-perl_1.7-5_amd64.deb) ... Unpacking replacement libtext-iconv-perl ... Preparing to replace perl-base 5.10.1-17squeeze6 (using .../perl-base_5.14.2-21+deb7u6_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.14.2-21+deb7u6) ... (Reading database ... 8891 files and directories currently installed.) Preparing to replace liblocale-gettext-perl 1.05-6 (using .../liblocale-gettext-perl_1.05-7+b1_amd64.deb) ... Unpacking replacement liblocale-gettext-perl ... Preparing to replace sed 4.2.1-7 (using .../sed_4.2.1-10_amd64.deb) ... Unpacking replacement sed ... Setting up sed (4.2.1-10) ... (Reading database ... 8891 files and directories currently installed.) Preparing to replace sysvinit 2.88dsf-13.1+squeeze1 (using .../sysvinit_2.88dsf-41+deb7u1_amd64.deb) ... Unpacking replacement sysvinit ... Setting up sysvinit (2.88dsf-41+deb7u1) ... Not restarting sysvinit (Reading database ... 8891 files and directories currently installed.) Preparing to replace tar 1.23-3 (using .../tar_1.26+dfsg-0.1+deb7u1_amd64.deb) ... Unpacking replacement tar ... Setting up tar (1.26+dfsg-0.1+deb7u1) ... (Reading database ... 8892 files and directories currently installed.) Preparing to replace base-passwd 3.5.22 (using .../base-passwd_3.5.26_amd64.deb) ... Unpacking replacement base-passwd ... Setting up base-passwd (3.5.26) ... (Reading database ... 8894 files and directories currently installed.) Preparing to replace bsdutils 1:2.17.2-9 (using .../bsdutils_1%3a2.20.1-5.3_amd64.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (1:2.20.1-5.3) ... (Reading database ... 8894 files and directories currently installed.) Preparing to replace ncurses-base 5.7+20100313-5 (using .../ncurses-base_5.9-10_all.deb) ... Unpacking replacement ncurses-base ... Setting up ncurses-base (5.9-10) ... Installing new version of config file /etc/terminfo/README ... (Reading database ... 8896 files and directories currently installed.) Preparing to replace libstdc++6 4.4.5-8 (using .../libstdc++6_4.7.2-5_amd64.deb) ... Unpacking replacement libstdc++6:amd64 ... Setting up libstdc++6:amd64 (4.7.2-5) ... (Reading database ... 8896 files and directories currently installed.) Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.7.dfsg-13_amd64.deb) ... Unpacking replacement zlib1g:amd64 ... Setting up zlib1g:amd64 (1:1.2.7.dfsg-13) ... (Reading database ... 8896 files and directories currently installed.) Preparing to replace gpgv 1.4.10-4+squeeze4 (using .../gpgv_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.12-7+deb7u9) ... (Reading database ... 8896 files and directories currently installed.) Preparing to replace debian-archive-keyring 2010.08.28+squeeze1 (using .../debian-archive-keyring_2014.3~deb7u1_all.deb) ... Unpacking replacement debian-archive-keyring ... Setting up debian-archive-keyring (2014.3~deb7u1) ... (Reading database ... 8903 files and directories currently installed.) Preparing to replace readline-common 6.1-3 (using .../readline-common_6.2+dfsg-0.1_all.deb) ... Unpacking replacement readline-common ... Setting up readline-common (6.2+dfsg-0.1) ... (Reading database ... 8902 files and directories currently installed.) Preparing to replace libreadline6 6.1-3 (using .../libreadline6_6.2+dfsg-0.1_amd64.deb) ... Unpacking replacement libreadline6:amd64 ... Setting up libreadline6:amd64 (6.2+dfsg-0.1) ... (Reading database ... 8902 files and directories currently installed.) Preparing to replace libusb-0.1-4 2:0.1.12-16 (using .../libusb-0.1-4_2%3a0.1.12-20+nmu1_amd64.deb) ... Unpacking replacement libusb-0.1-4:amd64 ... Setting up libusb-0.1-4:amd64 (2:0.1.12-20+nmu1) ... (Reading database ... 8901 files and directories currently installed.) Preparing to replace gnupg 1.4.10-4+squeeze4 (using .../gnupg_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.12-7+deb7u9) ... Selecting previously unselected package libapt-pkg4.12:amd64. dpkg: considering deconfiguration of apt, which would be broken by installation of libapt-pkg4.12:amd64 ... dpkg: yes, will deconfigure apt (broken by libapt-pkg4.12:amd64) (Reading database ... 8890 files and directories currently installed.) Unpacking libapt-pkg4.12:amd64 (from .../libapt-pkg4.12_0.9.7.9+deb7u7_amd64.deb) ... De-configuring apt ... Setting up libapt-pkg4.12:amd64 (0.9.7.9+deb7u7) ... (Reading database ... 8938 files and directories currently installed.) Preparing to replace apt 0.8.10.3+squeeze1 (using .../apt_0.9.7.9+deb7u7_amd64.deb) ... Unpacking replacement apt ... Setting up apt (0.9.7.9+deb7u7) ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... Installing new version of config file /etc/cron.daily/apt ... gpg: key B98321F9: "Squeeze Stable Release Key " not changed gpg: key 473041FA: "Debian Archive Automatic Signing Key (6.0/squeeze) " not changed gpg: key 65FFB764: "Wheezy Stable Release Key " not changed gpg: key 46925553: "Debian Archive Automatic Signing Key (7.0/wheezy) " not changed gpg: key 518E17E1: "Jessie Stable Release Key " not changed gpg: key 2B90D010: "Debian Archive Automatic Signing Key (8/jessie) " not changed gpg: key C857C906: "Debian Security Archive Automatic Signing Key (8/jessie) " not changed gpg: Total number processed: 7 gpg: unchanged: 7 gpg: checking the trustdb gpg: WARNING: digest algorithm MD5 is deprecated gpg: please see http://www.gnupg.org/faq/weak-digest-algos.html for more information gpg: no ultimately trusted keys found (Reading database ... 8849 files and directories currently installed.) Preparing to replace libncurses5 5.7+20100313-5 (using .../libncurses5_5.9-10_amd64.deb) ... Unpacking replacement libncurses5:amd64 ... Setting up libncurses5:amd64 (5.9-10) ... (Reading database ... 8841 files and directories currently installed.) Preparing to replace libss2 1.41.12-4stable1 (using .../libss2_1.42.5-1.1+deb7u1_amd64.deb) ... Unpacking replacement libss2:amd64 ... Setting up libss2:amd64 (1.42.5-1.1+deb7u1) ... Selecting previously unselected package libp11-kit0:amd64. (Reading database ... 8841 files and directories currently installed.) Unpacking libp11-kit0:amd64 (from .../libp11-kit0_0.12-3_amd64.deb) ... Preparing to replace libtasn1-3 2.7-1+squeeze+1 (using .../libtasn1-3_2.13-2+deb7u5_amd64.deb) ... Unpacking replacement libtasn1-3:amd64 ... Preparing to replace libgnutls26 2.8.6-1+squeeze3 (using .../libgnutls26_2.12.20-8+deb7u5_amd64.deb) ... Unpacking replacement libgnutls26:amd64 ... Preparing to replace libgpg-error0 1.6-1 (using .../libgpg-error0_1.10-3.1_amd64.deb) ... Unpacking replacement libgpg-error0:amd64 ... Preparing to replace libgcrypt11 1.4.5-2+squeeze1 (using .../libgcrypt11_1.5.0-5+deb7u6_amd64.deb) ... Unpacking replacement libgcrypt11:amd64 ... Selecting previously unselected package libssl1.0.0:amd64. Unpacking libssl1.0.0:amd64 (from .../libssl1.0.0_1.0.1t-1+deb7u4_amd64.deb) ... Preparing to replace mawk 1.3.3-15 (using .../mawk_1.3.3-17_amd64.deb) ... Unpacking replacement mawk ... Preparing to replace libkeyutils1:amd64 1.5.2-2~bpo60+1 (using .../libkeyutils1_1.5.5-3+deb7u1_amd64.deb) ... Unpacking replacement libkeyutils1:amd64 ... Preparing to replace libgssapi-krb5-2 1.8.3+dfsg-4squeeze7 (using .../libgssapi-krb5-2_1.10.1+dfsg-5+deb7u9_amd64.deb) ... Unpacking replacement libgssapi-krb5-2:amd64 ... Preparing to replace libk5crypto3 1.8.3+dfsg-4squeeze7 (using .../libk5crypto3_1.10.1+dfsg-5+deb7u9_amd64.deb) ... Unpacking replacement libk5crypto3:amd64 ... Preparing to replace libkrb5-3 1.8.3+dfsg-4squeeze7 (using .../libkrb5-3_1.10.1+dfsg-5+deb7u9_amd64.deb) ... Unpacking replacement libkrb5-3:amd64 ... Preparing to replace libkrb5support0 1.8.3+dfsg-4squeeze7 (using .../libkrb5support0_1.10.1+dfsg-5+deb7u9_amd64.deb) ... Unpacking replacement libkrb5support0:amd64 ... Preparing to replace libsasl2-2 2.1.23.dfsg1-7 (using .../libsasl2-2_2.1.25.dfsg1-6+deb7u1_amd64.deb) ... Unpacking replacement libsasl2-2:amd64 ... Selecting previously unselected package libbsd0:amd64. Unpacking libbsd0:amd64 (from .../libbsd0_0.4.2-1_amd64.deb) ... Preparing to replace libexpat1 2.0.1-7+squeeze1 (using .../libexpat1_2.1.0-1+deb7u5_amd64.deb) ... Unpacking replacement libexpat1:amd64 ... Preparing to replace libfreetype6 2.4.2-2.1+squeeze4 (using .../libfreetype6_2.4.9-1.1+deb7u7_amd64.deb) ... Unpacking replacement libfreetype6:amd64 ... Selecting previously unselected package libjpeg8:amd64. Unpacking libjpeg8:amd64 (from .../libjpeg8_8d-1+deb7u1_amd64.deb) ... Preparing to replace libpng12-0 1.2.44-1+squeeze4 (using .../libpng12-0_1.2.49-1+deb7u2_amd64.deb) ... Unpacking replacement libpng12-0:amd64 ... Preparing to replace libgd2-noxpm 2.0.36~rc1~dfsg-5 (using .../libgd2-noxpm_2.0.36~rc1~dfsg-6.1+deb7u11_amd64.deb) ... Unpacking replacement libgd2-noxpm:amd64 ... Preparing to replace libjpeg62 6b1-1 (using .../libjpeg62_6b1-3+deb7u1_amd64.deb) ... Unpacking replacement libjpeg62:amd64 ... Preparing to replace libldap-2.4-2 2.4.23-7.3 (using .../libldap-2.4-2_2.4.31-2+deb7u3_amd64.deb) ... Unpacking replacement libldap-2.4-2:amd64 ... Preparing to replace mysql-common 5.1.73-1 (using .../mysql-common_5.5.60-0+deb7u1_all.deb) ... Unpacking replacement mysql-common ... Selecting previously unselected package libmysqlclient18:amd64. Unpacking libmysqlclient18:amd64 (from .../libmysqlclient18_5.5.60-0+deb7u1_amd64.deb) ... Preparing to replace libxau6 1:1.0.6-1 (using .../libxau6_1%3a1.0.7-1_amd64.deb) ... Unpacking replacement libxau6:amd64 ... Preparing to replace libxdmcp6 1:1.0.3-2 (using .../libxdmcp6_1%3a1.1.1-1_amd64.deb) ... Unpacking replacement libxdmcp6:amd64 ... Preparing to replace libxcb1 1.6-1+squeeze1 (using .../libxcb1_1.8.1-2+deb7u1_amd64.deb) ... Unpacking replacement libxcb1:amd64 ... Preparing to replace libx11-6 2:1.3.3-4+squeeze1 (using .../libx11-6_2%3a1.5.0-1+deb7u4_amd64.deb) ... Unpacking replacement libx11-6:amd64 ... Preparing to replace libx11-data 2:1.3.3-4+squeeze1 (using .../libx11-data_2%3a1.5.0-1+deb7u4_all.deb) ... Unpacking replacement libx11-data ... Preparing to replace libpam-runtime 1.1.1-6.1+squeeze1 (using .../libpam-runtime_1.1.3-7.1_all.deb) ... Unpacking replacement libpam-runtime ... Setting up libpam-runtime (1.1.3-7.1) ... (Reading database ... 8893 files and directories currently installed.) Preparing to replace xz-utils 5.0.0-2 (using .../xz-utils_5.1.1alpha+20120614-2_amd64.deb) ... Unpacking replacement xz-utils ... Setting up xz-utils (5.1.1alpha+20120614-2) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode (Reading database ... 8895 files and directories currently installed.) Preparing to replace adduser 3.112+nmu2 (using .../adduser_3.113+nmu3_all.deb) ... Unpacking replacement adduser ... Preparing to replace debconf-i18n 1.5.36.1 (using .../debconf-i18n_1.5.49_all.deb) ... Unpacking replacement debconf-i18n ... Preparing to replace ucf 3.0025+nmu1 (using .../ucf_3.0025+nmu3_all.deb) ... Unpacking replacement ucf ... Preparing to replace csh 20070713-2 (using .../csh_20110502-2_amd64.deb) ... Unpacking replacement csh ... Selecting previously unselected package libhpdf-2.2.1. Unpacking libhpdf-2.2.1 (from .../libhpdf-2.2.1_2.2.1-1_amd64.deb) ... Preparing to replace libpq5 9.1.15-0+deb7u1~bpo60+1 (using .../libpq5_9.1.24lts2-0+deb7u2_amd64.deb) ... Unpacking replacement libpq5 ... Preparing to replace emboss 6.3.1-6~bpo60+1 (using .../emboss_6.4.0-2_amd64.deb) ... Unpacking replacement emboss ... Preparing to replace emboss-lib 6.3.1-6~bpo60+1 (using .../emboss-lib_6.4.0-2_amd64.deb) ... Unpacking replacement emboss-lib ... Preparing to replace emboss-data 6.3.1-6~bpo60+1 (using .../emboss-data_6.4.0-2_all.deb) ... Unpacking replacement emboss-data ... Preparing to replace gcc-4.4-base 4.4.5-8 (using .../gcc-4.4-base_4.4.7-2_amd64.deb) ... Unpacking replacement gcc-4.4-base:amd64 ... Setting up libtext-charwidth-perl (0.04-7+b1) ... Setting up libtext-iconv-perl (1.7-5) ... Setting up liblocale-gettext-perl (1.05-7+b1) ... Setting up libp11-kit0:amd64 (0.12-3) ... Setting up libtasn1-3:amd64 (2.13-2+deb7u5) ... Setting up libgpg-error0:amd64 (1.10-3.1) ... Setting up libgcrypt11:amd64 (1.5.0-5+deb7u6) ... Setting up libgnutls26:amd64 (2.12.20-8+deb7u5) ... Setting up libssl1.0.0:amd64 (1.0.1t-1+deb7u4) ... Setting up mawk (1.3.3-17) ... Setting up libkeyutils1:amd64 (1.5.5-3+deb7u1) ... Setting up libkrb5support0:amd64 (1.10.1+dfsg-5+deb7u9) ... Setting up libk5crypto3:amd64 (1.10.1+dfsg-5+deb7u9) ... Setting up libkrb5-3:amd64 (1.10.1+dfsg-5+deb7u9) ... Setting up libgssapi-krb5-2:amd64 (1.10.1+dfsg-5+deb7u9) ... Setting up libsasl2-2:amd64 (2.1.25.dfsg1-6+deb7u1) ... Setting up libbsd0:amd64 (0.4.2-1) ... Setting up libexpat1:amd64 (2.1.0-1+deb7u5) ... Setting up libfreetype6:amd64 (2.4.9-1.1+deb7u7) ... Setting up libjpeg8:amd64 (8d-1+deb7u1) ... Setting up libpng12-0:amd64 (1.2.49-1+deb7u2) ... Setting up libgd2-noxpm:amd64 (2.0.36~rc1~dfsg-6.1+deb7u11) ... Setting up libjpeg62:amd64 (6b1-3+deb7u1) ... Setting up libldap-2.4-2:amd64 (2.4.31-2+deb7u3) ... Installing new version of config file /etc/ldap/ldap.conf ... Setting up mysql-common (5.5.60-0+deb7u1) ... Installing new version of config file /etc/mysql/my.cnf ... Setting up libmysqlclient18:amd64 (5.5.60-0+deb7u1) ... Setting up libxau6:amd64 (1:1.0.7-1) ... Setting up libxdmcp6:amd64 (1:1.1.1-1) ... Setting up libxcb1:amd64 (1.8.1-2+deb7u1) ... Setting up libx11-data (2:1.5.0-1+deb7u4) ... Setting up libx11-6:amd64 (2:1.5.0-1+deb7u4) ... Setting up adduser (3.113+nmu3) ... Installing new version of config file /etc/deluser.conf ... Setting up debconf-i18n (1.5.49) ... Setting up ucf (3.0025+nmu3) ... Setting up csh (20110502-2) ... Setting up libhpdf-2.2.1 (2.2.1-1) ... Setting up libpq5 (9.1.24lts2-0+deb7u2) ... Setting up emboss-lib (6.4.0-2) ... Setting up emboss-data (6.4.0-2) ... Setting up emboss (6.4.0-2) ... Setting up gcc-4.4-base:amd64 (4.4.7-2) ... 1m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-yf', 'dist-upgrade'] 1m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m5.7s DUMP: fb1ccc436f778eea085ae099e3151787 - 1m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 1m5.7s DUMP: Package: emboss Version: 6.4.0-2 Installed-Size: 4157 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (= 6.4.0-2), libc6 (>= 2.7), libexpat1 (>= 2.0.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libhpdf-2.2.1, libmysqlclient18 (>= 5.5.24+dfsg-1), libpng12-0 (>= 1.2.13-4), libpq5, libx11-6, zlib1g (>= 1:1.1.4), emboss-data (= 6.4.0-2) Recommends: primer3, dialign Suggests: emboss-doc, emboss-test, embassy, clustalw Description: european molecular biology open software suite Homepage: http://emboss.sourceforge.net Description-md5: 4f3d6a457939538fb5f7639f0452d33e Tag: field::biology, field::biology:bioinformatics, field::biology:molecular, implemented-in::c, interface::commandline, role::program, scope::suite, use::analysing, use::comparing, use::converting, use::editing, use::organizing, use::searching, use::text-formatting, use::typesetting, use::viewing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO, works-with::db Section: science Priority: optional Filename: pool/main/e/emboss/emboss_6.4.0-2_amd64.deb Size: 1008618 MD5sum: 5dbd6ac006faec47a9215a66df6c745e SHA1: 6f0f745d8aede1a01eaa16b8cb447480550afd82 SHA256: 07d863d3d2e285d60fea211081da980090291156c17f582d1799dcd008415506 1m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'show', '--no-all-versions', 'emboss'] 1m5.7s INFO: apt-cache knows about the following packages: emboss 1m5.7s INFO: Running scripts pre_install 1m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_database-server'] 1m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_database-server'] 1m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_exceptions'] 1m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_exceptions'] 1m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_extras'] 1m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_extras'] 1m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture'] 1m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture'] 1m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy'] 1m5.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror.bm.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 1m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy'] 1m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy', 'emboss'] 1m6.0s DUMP: emboss: Installed: 6.4.0-2 Candidate: 6.4.0-2 Version table: *** 6.4.0-2 0 500 http://mirror.bm.debian.org/debian/ wheezy/main amd64 Packages 100 /var/lib/dpkg/status 1m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy', 'emboss'] 1m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-y', 'install', 'emboss'] 1m6.5s DUMP: Reading package lists... Building dependency tree... Reading state information... emboss is already the newest version. The following packages were automatically installed and are no longer required: csh libbsd0 libhpdf-2.1.0 libjpeg62 libmysqlclient16 libssl0.9.8 Use 'apt-get autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-y', 'install', 'emboss'] 1m6.5s INFO: Running scripts post_install 1m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_install_exceptions'] 1m6.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_install_exceptions'] 1m6.6s INFO: Running scripts post_distupgrade 1m6.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m6.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m6.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_exceptions'] 1m6.6s DUMP: FIXING /usr/share/keyrings/debian-archive-removed-keys.gpg~ `/usr/share/keyrings/debian-archive-removed-keys.gpg~' -> `/usr/share/keyrings/debian-archive-removed-keys.gpg' 1m6.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_exceptions'] 1m6.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_experimental'] 1m6.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_experimental'] 1m6.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_hack_debsums'] 1m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_hack_debsums'] 1m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_zz_backports'] 1m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_distupgrade_zz_backports'] 1m6.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m8.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m8.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m9.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m9.6s INFO: Running scripts pre_install 1m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_database-server'] 1m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_database-server'] 1m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_exceptions'] 1m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_exceptions'] 1m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_extras'] 1m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_extras'] 1m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture'] 1m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture'] 1m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy'] 1m9.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror.bm.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 1m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy'] 1m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy', 'emboss'] 1m9.9s DUMP: emboss: Installed: 6.4.0-2 Candidate: 6.4.0-2 Version table: *** 6.4.0-2 0 500 http://mirror.bm.debian.org/debian/ wheezy/main amd64 Packages 100 /var/lib/dpkg/status 1m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-cache', 'policy', 'emboss'] 1m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-y', 'install', 'emboss=6.4.0-2'] 1m10.5s DUMP: Reading package lists... Building dependency tree... Reading state information... emboss is already the newest version. The following packages were automatically installed and are no longer required: csh libbsd0 libhpdf-2.1.0 libjpeg62 libmysqlclient16 libssl0.9.8 Use 'apt-get autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', '-y', 'install', 'emboss=6.4.0-2'] 1m10.5s INFO: Running scripts post_install 1m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_install_exceptions'] 1m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_install_exceptions'] 1m10.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m12.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m12.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m12.1s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u4 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed csh csh 20110502-2 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed emboss emboss 6.4.0-2 install ok installed emboss-data emboss-data 6.4.0-2 install ok installed emboss-lib emboss-lib 6.4.0-2 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.4-base:amd64 gcc-4.4-base 4.4.7-2 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u9 install ok installed gpgv gpgv 1.4.12-7+deb7u9 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 deinstall ok config-files libajax6 libajax6 6.1.0-5 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbsd0:amd64 libbsd0 0.4.2-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u12 install ok installed libc6:amd64 libc6 2.13-38+deb7u12 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb4.8 libdb4.8 4.8.30-2 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5+deb7u1 install ok installed libexpat1:amd64 libexpat1 2.1.0-1+deb7u5 install ok installed libfreetype6:amd64 libfreetype6 2.4.9-1.1+deb7u7 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed libgcrypt11:amd64 libgcrypt11 1.5.0-5+deb7u6 install ok installed libgd2-noxpm:amd64 libgd2-noxpm 2.0.36~rc1~dfsg-6.1+deb7u11 install ok installed libgnutls26:amd64 libgnutls26 2.12.20-8+deb7u5 install ok installed libgpg-error0:amd64 libgpg-error0 1.10-3.1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.10.1+dfsg-5+deb7u9 install ok installed libhpdf-2.1.0 libhpdf-2.1.0 2.1.0+dfsg-1 install ok installed libhpdf-2.2.1 libhpdf-2.2.1 2.2.1-1 install ok installed libjpeg62:amd64 libjpeg62 6b1-3+deb7u1 install ok installed libjpeg8:amd64 libjpeg8 8d-1+deb7u1 install ok installed libk5crypto3:amd64 libk5crypto3 1.10.1+dfsg-5+deb7u9 install ok installed libkeyutils1:amd64 libkeyutils1 1.5.5-3+deb7u1 install ok installed libkrb5-3:amd64 libkrb5-3 1.10.1+dfsg-5+deb7u9 install ok installed libkrb5support0:amd64 libkrb5support0 1.10.1+dfsg-5+deb7u9 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.31-2+deb7u3 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma2 liblzma2 5.0.0-2 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libmysqlclient16 libmysqlclient16 5.1.73-1 install ok installed libmysqlclient18:amd64 libmysqlclient18 5.5.60-0+deb7u1 install ok installed libncurses5:amd64 libncurses5 5.9-10 deinstall ok config-files libnucleus6 libnucleus6 6.1.0-5 install ok installed libp11-kit0:amd64 libp11-kit0 0.12-3 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libpng12-0:amd64 libpng12-0 1.2.49-1+deb7u2 install ok installed libpq5 libpq5 9.1.24lts2-0+deb7u2 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.25.dfsg1-6+deb7u1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libssl0.9.8 libssl0.9.8 0.9.8o-4squeeze14 install ok installed libssl1.0.0:amd64 libssl1.0.0 1.0.1t-1+deb7u4 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtasn1-3:amd64 libtasn1-3 2.13-2+deb7u5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed libx11-6:amd64 libx11-6 2:1.5.0-1+deb7u4 install ok installed libx11-data libx11-data 2:1.5.0-1+deb7u4 install ok installed libxau6:amd64 libxau6 1:1.0.7-1 install ok installed libxcb1:amd64 libxcb1 1.8.1-2+deb7u1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.1-1 install ok installed login login 1:4.1.5.1-1+deb7u1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u12 install ok installed mysql-common mysql-common 5.5.60-0+deb7u1 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1+deb7u1 install ok installed perl-base perl-base 5.14.2-21+deb7u6 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7+deb7u1 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1+deb7u1 install ok installed tzdata tzdata 2018e-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 1m12.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m13.6s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', '-ac', '--ignore-obsolete'] 1m16.4s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', '-ac', '--ignore-obsolete'] 1m16.4s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m16.4s DUMP: 0.15.1 1m16.4s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m16.4s INFO: Running adequate version 0.15.1 now. 1m16.4s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'emboss'] 1m28.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'emboss'] 1m28.0s INFO: Running scripts pre_remove 1m28.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m30.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m30.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m30.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m30.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_exceptions'] 1m30.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/pre_remove_exceptions'] 1m30.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'remove', 'libnucleus6', 'libfreetype6:amd64', 'libgssapi-krb5-2:amd64', 'libx11-data', 'libgcrypt11:amd64', 'gcc-4.4-base:amd64', 'libgd2-noxpm:amd64', 'libx11-6:amd64', 'libmysqlclient16', 'mysql-common', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'libtasn1-3:amd64', 'emboss-lib', 'libkrb5support0:amd64', 'libhpdf-2.1.0', 'libssl1.0.0:amd64', 'libajax6', 'emboss-data', 'libhpdf-2.2.1', 'libssl0.9.8', 'libpq5', 'libxcb1:amd64', 'libgpg-error0:amd64', 'libxdmcp6:amd64', 'libexpat1:amd64', 'libkrb5-3:amd64', 'libxau6:amd64', 'libpng12-0:amd64', 'libmysqlclient18:amd64', 'libp11-kit0:amd64', 'libjpeg62:amd64', 'libbsd0:amd64', 'libgnutls26:amd64', 'csh', 'libk5crypto3:amd64', 'libldap-2.4-2:amd64', 'libsasl2-2:amd64', 'libdb4.8', 'emboss'] 1m32.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Package 'libajax6' is not installed, so not removed Package 'libnucleus6' is not installed, so not removed The following packages will be REMOVED: csh emboss emboss-data emboss-lib gcc-4.4-base libbsd0 libdb4.8 libexpat1 libfreetype6 libgcrypt11 libgd2-noxpm libgnutls26 libgpg-error0 libgssapi-krb5-2 libhpdf-2.1.0 libhpdf-2.2.1 libjpeg62 libjpeg8 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libmysqlclient16 libmysqlclient18 libp11-kit0 libpng12-0 libpq5 libsasl2-2 libssl0.9.8 libssl1.0.0 libtasn1-3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 mysql-common 0 upgraded, 0 newly installed, 38 to remove and 0 not upgraded. After this operation, 362 MB disk space will be freed. (Reading database ... 9344 files and directories currently installed.) Removing csh ... Removing emboss ... Removing emboss-data ... Removing emboss-lib ... Removing gcc-4.4-base:amd64 ... Removing libbsd0:amd64 ... Removing libdb4.8 ... Removing libexpat1:amd64 ... Removing libgd2-noxpm:amd64 ... Removing libfreetype6:amd64 ... Removing libpq5 ... Removing libldap-2.4-2:amd64 ... Removing libgnutls26:amd64 ... Removing libgcrypt11:amd64 ... Removing libgpg-error0:amd64 ... Removing libgssapi-krb5-2:amd64 ... Removing libhpdf-2.1.0 ... Removing libhpdf-2.2.1 ... Removing libjpeg62:amd64 ... Removing libjpeg8:amd64 ... Removing libkrb5-3:amd64 ... Removing libk5crypto3:amd64 ... Removing libkrb5support0:amd64 ... Removing libkeyutils1:amd64 ... Removing libmysqlclient16 ... Removing libmysqlclient18:amd64 ... Removing libp11-kit0:amd64 ... Removing libpng12-0:amd64 ... Removing libsasl2-2:amd64 ... Removing libssl0.9.8 ... Removing libssl1.0.0:amd64 ... Removing libtasn1-3:amd64 ... Removing libx11-6:amd64 ... Removing libx11-data ... Removing libxcb1:amd64 ... Removing libxau6:amd64 ... Removing libxdmcp6:amd64 ... Removing mysql-common ... 1m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'remove', 'libnucleus6', 'libfreetype6:amd64', 'libgssapi-krb5-2:amd64', 'libx11-data', 'libgcrypt11:amd64', 'gcc-4.4-base:amd64', 'libgd2-noxpm:amd64', 'libx11-6:amd64', 'libmysqlclient16', 'mysql-common', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'libtasn1-3:amd64', 'emboss-lib', 'libkrb5support0:amd64', 'libhpdf-2.1.0', 'libssl1.0.0:amd64', 'libajax6', 'emboss-data', 'libhpdf-2.2.1', 'libssl0.9.8', 'libpq5', 'libxcb1:amd64', 'libgpg-error0:amd64', 'libxdmcp6:amd64', 'libexpat1:amd64', 'libkrb5-3:amd64', 'libxau6:amd64', 'libpng12-0:amd64', 'libmysqlclient18:amd64', 'libp11-kit0:amd64', 'libjpeg62:amd64', 'libbsd0:amd64', 'libgnutls26:amd64', 'csh', 'libk5crypto3:amd64', 'libldap-2.4-2:amd64', 'libsasl2-2:amd64', 'libdb4.8', 'emboss'] 1m32.5s INFO: Running scripts post_remove 1m32.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_remove_exceptions'] 1m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_remove_exceptions'] 1m32.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_remove_extras'] 1m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_remove_extras'] 1m32.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg', '--purge', 'libnucleus6', 'libfreetype6:amd64', 'libgssapi-krb5-2:amd64', 'libx11-data', 'libgcrypt11:amd64', 'gcc-4.4-base:amd64', 'libgd2-noxpm:amd64', 'libx11-6:amd64', 'libmysqlclient16', 'mysql-common', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'libtasn1-3:amd64', 'emboss-lib', 'libkrb5support0:amd64', 'libhpdf-2.1.0', 'libssl1.0.0:amd64', 'libajax6', 'emboss-data', 'libhpdf-2.2.1', 'libssl0.9.8', 'libpq5', 'libxcb1:amd64', 'libgpg-error0:amd64', 'libxdmcp6:amd64', 'libexpat1:amd64', 'libkrb5-3:amd64', 'libxau6:amd64', 'libpng12-0:amd64', 'libmysqlclient18:amd64', 'libp11-kit0:amd64', 'libjpeg62:amd64', 'libbsd0:amd64', 'libgnutls26:amd64', 'csh', 'libk5crypto3:amd64', 'libldap-2.4-2:amd64', 'libsasl2-2:amd64', 'libdb4.8'] 1m33.1s DUMP: (Reading database ... 6798 files and directories currently installed.) Removing libnucleus6 ... Purging configuration files for libnucleus6 ... Removing libfreetype6:amd64 ... Purging configuration files for libfreetype6:amd64 ... Removing libgssapi-krb5-2:amd64 ... Purging configuration files for libgssapi-krb5-2:amd64 ... dpkg: warning: ignoring request to remove libx11-data which isn't installed Removing libgcrypt11:amd64 ... Purging configuration files for libgcrypt11:amd64 ... dpkg: warning: ignoring request to remove gcc-4.4-base which isn't installed Removing libgd2-noxpm:amd64 ... Purging configuration files for libgd2-noxpm:amd64 ... Removing libx11-6:amd64 ... Purging configuration files for libx11-6:amd64 ... Removing libmysqlclient16 ... Purging configuration files for libmysqlclient16 ... Removing mysql-common ... Purging configuration files for mysql-common ... dpkg: warning: ignoring request to remove libjpeg8 which isn't installed Removing libkeyutils1:amd64 ... Purging configuration files for libkeyutils1:amd64 ... Removing libtasn1-3:amd64 ... Purging configuration files for libtasn1-3:amd64 ... Removing emboss-lib ... Purging configuration files for emboss-lib ... Removing libkrb5support0:amd64 ... Purging configuration files for libkrb5support0:amd64 ... Removing libhpdf-2.1.0 ... Purging configuration files for libhpdf-2.1.0 ... Removing libssl1.0.0:amd64 ... Purging configuration files for libssl1.0.0:amd64 ... Removing libajax6 ... Purging configuration files for libajax6 ... dpkg: warning: ignoring request to remove emboss-data which isn't installed Removing libhpdf-2.2.1 ... Purging configuration files for libhpdf-2.2.1 ... Removing libssl0.9.8 ... Purging configuration files for libssl0.9.8 ... Removing libpq5 ... Purging configuration files for libpq5 ... Removing libxcb1:amd64 ... Purging configuration files for libxcb1:amd64 ... Removing libgpg-error0:amd64 ... Purging configuration files for libgpg-error0:amd64 ... Removing libxdmcp6:amd64 ... Purging configuration files for libxdmcp6:amd64 ... Removing libexpat1:amd64 ... Purging configuration files for libexpat1:amd64 ... Removing libkrb5-3:amd64 ... Purging configuration files for libkrb5-3:amd64 ... Removing libxau6:amd64 ... Purging configuration files for libxau6:amd64 ... Removing libpng12-0:amd64 ... Purging configuration files for libpng12-0:amd64 ... Removing libmysqlclient18:amd64 ... Purging configuration files for libmysqlclient18:amd64 ... Removing libp11-kit0:amd64 ... Purging configuration files for libp11-kit0:amd64 ... dpkg: warning: ignoring request to remove libjpeg62 which isn't installed Removing libbsd0:amd64 ... Purging configuration files for libbsd0:amd64 ... Removing libgnutls26:amd64 ... Purging configuration files for libgnutls26:amd64 ... Removing csh ... Purging configuration files for csh ... Removing libk5crypto3:amd64 ... Purging configuration files for libk5crypto3:amd64 ... Removing libldap-2.4-2:amd64 ... Purging configuration files for libldap-2.4-2:amd64 ... Removing libsasl2-2:amd64 ... Purging configuration files for libsasl2-2:amd64 ... dpkg: warning: ignoring request to remove libdb4.8 which isn't installed 1m33.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg', '--purge', 'libnucleus6', 'libfreetype6:amd64', 'libgssapi-krb5-2:amd64', 'libx11-data', 'libgcrypt11:amd64', 'gcc-4.4-base:amd64', 'libgd2-noxpm:amd64', 'libx11-6:amd64', 'libmysqlclient16', 'mysql-common', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'libtasn1-3:amd64', 'emboss-lib', 'libkrb5support0:amd64', 'libhpdf-2.1.0', 'libssl1.0.0:amd64', 'libajax6', 'emboss-data', 'libhpdf-2.2.1', 'libssl0.9.8', 'libpq5', 'libxcb1:amd64', 'libgpg-error0:amd64', 'libxdmcp6:amd64', 'libexpat1:amd64', 'libkrb5-3:amd64', 'libxau6:amd64', 'libpng12-0:amd64', 'libmysqlclient18:amd64', 'libp11-kit0:amd64', 'libjpeg62:amd64', 'libbsd0:amd64', 'libgnutls26:amd64', 'csh', 'libk5crypto3:amd64', 'libldap-2.4-2:amd64', 'libsasl2-2:amd64', 'libdb4.8'] 1m33.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg', '--purge', 'emboss'] 1m33.1s DUMP: (Reading database ... 6792 files and directories currently installed.) Removing emboss ... Purging configuration files for emboss ... 1m33.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg', '--purge', 'emboss'] 1m33.1s INFO: Running scripts post_purge 1m33.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_purge_exceptions'] 1m33.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_purge_exceptions'] 1m33.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg', '--purge', '--pending'] 1m33.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg', '--purge', '--pending'] 1m33.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg', '--remove', '--pending'] 1m33.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg', '--remove', '--pending'] 1m33.2s INFO: Running scripts post_test 1m33.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_test_exceptions'] 1m33.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'tmp/scripts/post_test_exceptions'] 1m33.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m34.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m34.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg-divert', '--list'] 1m34.4s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m34.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'dpkg-divert', '--list'] 1m34.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'clean'] 1m34.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpMdRgDB', 'apt-get', 'clean'] 1m34.5s DEBUG: Recording chroot state 1m38.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/shm'] 1m38.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/shm'] 1m38.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/console'] 1m38.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/console'] 1m38.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/ptmx'] 1m38.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/ptmx'] 1m38.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/pts'] 1m38.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/dev/pts'] 1m38.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/proc'] 1m38.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpMdRgDB/proc'] 1m38.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m38.4s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpMdRgDB'] 1m38.4s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpMdRgDB 1m38.5s INFO: PASS: Upgrading between Debian distributions. 1m38.5s INFO: PASS: All tests. 1m38.5s INFO: piuparts run ends. ret=0 End: 2018-10-21 13:40:00 UTC