Start: 2017-12-04 14:52:55 UTC [squeeze] Package: libhdf5-mpi-dev Priority: extra Section: libdevel Installed-Size: 48 Maintainer: Debian GIS Project Architecture: amd64 Source: hdf5 Version: 1.8.4-patch1-2 Depends: libhdf5-openmpi-dev, mpi-default-dev Filename: pool/main/h/hdf5/libhdf5-mpi-dev_1.8.4-patch1-2_amd64.deb Size: 18326 MD5sum: f64fd591fdf2a1e38860f4d02c6178e7 SHA1: 60a80170f0fabeef9822a5cee5dbd484cf7ab2d6 SHA256: 3ecc4e82838a97bc93809b50dad915a920159684ae9d550393a0c90e207b5d17 Description: Hierarchical Data Format 5 (HDF5) - development files - MPICH version HDF5 is a file format and library for storing scientific data. HDF5 was designed and implemented to address the deficiencies of HDF4.x. It has a more powerful and flexible data model, supports files larger than 2 GB, and supports parallel I/O. . This package depends on the default MPI version of HDF5 for each platform. Homepage: http://hdfgroup.org/HDF5/ [wheezy-lts] Package: libhdf5-mpi-dev Source: hdf5 Version: 1.8.8-9+deb7u1 Installed-Size: 49 Maintainer: Debian GIS Project Architecture: amd64 Depends: libhdf5-openmpi-dev, mpi-default-dev Description: Hierarchical Data Format 5 (HDF5) - development files - MPICH2 version Homepage: http://hdfgroup.org/HDF5/ Description-md5: c00c4d19e21699e8eaa1eaadcde831cb Section: libdevel Priority: extra Filename: pool/updates/main/h/hdf5/libhdf5-mpi-dev_1.8.8-9+deb7u1_amd64.deb Size: 24494 MD5sum: 783a72b8f2278b491e91481b6797fed3 SHA1: e5d1d05111cb6a6b4a7dbc01eba2cd4531761060 SHA256: 87d01229f852685912fc2dfa36632551e3af878a4b96b89b8b473bb55bc265de Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --no-check-valid-until --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze -d wheezy-lts -B reference-chroot-metadata.dat --apt libhdf5-mpi-dev=1.8.8-9+deb7u1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.83~201711291402~0.82-24-gd0ad6d8b starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --no-check-valid-until --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze -d wheezy-lts -B reference-chroot-metadata.dat --apt libhdf5-mpi-dev=1.8.8-9+deb7u1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.9.0-4-amd64 #1 SMP Debian 4.9.51-1 (2017-09-28) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp0JFqmO 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp0JFqmO 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m2.0s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m2.0s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/proc'] 0m2.0s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/proc'] 0m2.0s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/pts'] 0m2.0s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/pts'] 0m2.0s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/ptmx'] 0m2.0s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/ptmx'] 0m2.0s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/console'] 0m2.0s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/console'] 0m2.0s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/shm'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/shm'] 0m2.1s DEBUG: sources.list: deb http://archive.debian.org/debian squeeze main 0m2.1s DEBUG: Created policy-rc.d and chmodded it. 0m2.1s DEBUG: Created resolv.conf. 0m2.1s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp0JFqmO/tmp/scripts/ 0m2.1s DEBUG: Copying scriptsdir /etc/piuparts/scripts-wheezy to /srv/piuparts.debian.org/tmp/tmp0JFqmO/tmp/scripts/ 0m2.1s INFO: Running scripts post_chroot_unpack 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', 'update'] 0m2.1s DUMP: Hit http://archive.debian.org squeeze Release.gpg Ign http://archive.debian.org/debian/ squeeze/main Translation-en Hit http://archive.debian.org squeeze Release Hit http://archive.debian.org squeeze/main amd64 Packages Reading package lists... 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', 'update'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-yf', 'dist-upgrade'] 0m2.3s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-yf', 'dist-upgrade'] 0m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.5s DUMP: 6a0e4d3b374fdc6be02fc5f39fbf3166 - 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.5s INFO: Running scripts post_setup 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_dummy_users'] 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_dummy_users'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_forbid_home'] 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_forbid_home'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_minimize'] 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_minimize'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m3.6s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. Get:1 http://archive.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://archive.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (21.7 MB/s) Selecting previously deselected package adduser. (Reading database ... 6138 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_zz_backports'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_setup_zz_backports'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.6s DUMP: install ok installed adduser 3.112+nmu2 install ok installed apt 0.8.10.3+squeeze1 install ok installed base-files 6.0squeeze10 install ok installed base-passwd 3.5.22 install ok installed bash 4.1-3 install ok installed bsdutils 1:2.17.2-9 install ok installed coreutils 8.5-1 install ok installed dash 0.5.5.1-7.4 install ok installed debconf 1.5.36.1 install ok installed debconf-i18n 1.5.36.1 install ok installed debian-archive-keyring 2010.08.28+squeeze1 install ok installed debianutils 3.4 install ok installed diffutils 1:3.0-1 install ok installed dpkg 1.15.11 install ok installed e2fslibs 1.41.12-4stable1 install ok installed e2fsprogs 1.41.12-4stable1 install ok installed findutils 4.4.2-1+b1 install ok installed gcc-4.4-base 4.4.5-8 install ok installed gnupg 1.4.10-4+squeeze4 install ok installed gpgv 1.4.10-4+squeeze4 install ok installed grep 2.6.3-3+squeeze1 install ok installed gzip 1.3.12-9+squeeze1 install ok installed hostname 3.04 install ok installed initscripts 2.88dsf-13.1+squeeze1 install ok installed insserv 1.14.0-2 install ok installed libacl1 2.2.49-4 install ok installed libattr1 1:2.4.44-2 install ok installed libblkid1 2.17.2-9 install ok installed libbz2-1.0 1.0.5-6+squeeze1 install ok installed libc-bin 2.11.3-4 install ok installed libc6 2.11.3-4 install ok installed libcomerr2 1.41.12-4stable1 install ok installed libdb4.8 4.8.30-2 install ok installed libgcc1 1:4.4.5-8 install ok installed liblocale-gettext-perl 1.05-6 install ok installed liblzma2 5.0.0-2 install ok installed libncurses5 5.7+20100313-5 install ok installed libpam-modules 1.1.1-6.1+squeeze1 install ok installed libpam-runtime 1.1.1-6.1+squeeze1 install ok installed libpam0g 1.1.1-6.1+squeeze1 install ok installed libreadline6 6.1-3 install ok installed libselinux1 2.0.96-1 install ok installed libsepol1 2.0.41-1 install ok installed libslang2 2.2.2-4 install ok installed libss2 1.41.12-4stable1 install ok installed libstdc++6 4.4.5-8 install ok installed libtext-charwidth-perl 0.04-6 install ok installed libtext-iconv-perl 1.7-2 install ok installed libtext-wrapi18n-perl 0.06-7 install ok installed libusb-0.1-4 2:0.1.12-16 install ok installed libuuid1 2.17.2-9 install ok installed login 1:4.1.4.2+svn3283-2+squeeze1 install ok installed lsb-base 3.2-23.2squeeze1 install ok installed mawk 1.3.3-15 install ok installed mount 2.17.2-9 install ok installed ncurses-base 5.7+20100313-5 install ok installed ncurses-bin 5.7+20100313-5 install ok installed passwd 1:4.1.4.2+svn3283-2+squeeze1 install ok installed perl-base 5.10.1-17squeeze6 install ok installed readline-common 6.1-3 install ok installed sed 4.2.1-7 install ok installed sensible-utils 0.0.4 install ok installed sysv-rc 2.88dsf-13.1+squeeze1 install ok installed sysvinit 2.88dsf-13.1+squeeze1 install ok installed sysvinit-utils 2.88dsf-13.1+squeeze1 install ok installed tar 1.23-3 install ok installed tzdata 2014e-0squeeze1 install ok installed ucf 3.0025+nmu1 install ok installed util-linux 2.17.2-9 install ok installed xz-utils 5.0.0-2 install ok installed zlib1g 1:1.2.3.4.dfsg-3 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.6s DEBUG: Loading chroot meta data from reference-chroot-metadata.dat 0m4.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m4.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m4.6s INFO: Running scripts is_testable 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/is_testable_uninstallable'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/is_testable_uninstallable'] 0m4.6s INFO: Running scripts pre_test 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_test_exceptions'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_test_exceptions'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_test_root_password'] 0m4.6s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_test_root_password'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'show', 'libhdf5-mpi-dev'] 0m4.7s DUMP: Package: libhdf5-mpi-dev Priority: extra Section: libdevel Installed-Size: 48 Maintainer: Debian GIS Project Architecture: amd64 Source: hdf5 Version: 1.8.4-patch1-2 Depends: libhdf5-openmpi-dev, mpi-default-dev Filename: pool/main/h/hdf5/libhdf5-mpi-dev_1.8.4-patch1-2_amd64.deb Size: 18326 MD5sum: f64fd591fdf2a1e38860f4d02c6178e7 SHA1: 60a80170f0fabeef9822a5cee5dbd484cf7ab2d6 SHA256: 3ecc4e82838a97bc93809b50dad915a920159684ae9d550393a0c90e207b5d17 Description: Hierarchical Data Format 5 (HDF5) - development files - MPICH version HDF5 is a file format and library for storing scientific data. HDF5 was designed and implemented to address the deficiencies of HDF4.x. It has a more powerful and flexible data model, supports files larger than 2 GB, and supports parallel I/O. . This package depends on the default MPI version of HDF5 for each platform. Homepage: http://hdfgroup.org/HDF5/ 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'show', 'libhdf5-mpi-dev'] 0m4.7s INFO: apt-cache knows about the following packages: libhdf5-mpi-dev 0m4.7s INFO: Running scripts pre_install 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_database-server'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_database-server'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_exceptions'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_exceptions'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_extras'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_extras'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy'] 0m4.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://archive.debian.org/debian/ squeeze/main amd64 Packages release v=6.0.10,o=Debian,a=oldoldstable,n=squeeze,l=Debian,c=main origin archive.debian.org Pinned packages: 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy', 'libhdf5-mpi-dev'] 0m4.8s DUMP: libhdf5-mpi-dev: Installed: (none) Candidate: 1.8.4-patch1-2 Version table: 1.8.4-patch1-2 0 500 http://archive.debian.org/debian/ squeeze/main amd64 Packages 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy', 'libhdf5-mpi-dev'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-y', 'install', 'libhdf5-mpi-dev'] 0m6.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: libc-dev-bin libc6-dev libgfortran3 libhdf5-openmpi-1.8.4 libhdf5-openmpi-dev libibverbs-dev libibverbs1 libjpeg62 libjpeg62-dev libnuma1 libopenmpi-dev libopenmpi1.3 libtorque2 linux-libc-dev mpi-default-dev openmpi-common zlib1g-dev Suggested packages: glibc-doc libhdf5-doc Recommended packages: manpages-dev gcc c-compiler The following NEW packages will be installed: libc-dev-bin libc6-dev libgfortran3 libhdf5-mpi-dev libhdf5-openmpi-1.8.4 libhdf5-openmpi-dev libibverbs-dev libibverbs1 libjpeg62 libjpeg62-dev libnuma1 libopenmpi-dev libopenmpi1.3 libtorque2 linux-libc-dev mpi-default-dev openmpi-common zlib1g-dev 0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded. Need to get 12.5 MB of archives. After this operation, 59.3 MB of additional disk space will be used. Get:1 http://archive.debian.org/debian/ squeeze/main libc-dev-bin amd64 2.11.3-4 [210 kB] Get:2 http://archive.debian.org/debian/ squeeze/main linux-libc-dev amd64 2.6.32-48squeeze6 [857 kB] Get:3 http://archive.debian.org/debian/ squeeze/main libc6-dev amd64 2.11.3-4 [2593 kB] Get:4 http://archive.debian.org/debian/ squeeze/main libgfortran3 amd64 4.4.5-8 [291 kB] Get:5 http://archive.debian.org/debian/ squeeze/main libjpeg62 amd64 6b1-1 [94.0 kB] Get:6 http://archive.debian.org/debian/ squeeze/main libjpeg62-dev amd64 6b1-1 [201 kB] Get:7 http://archive.debian.org/debian/ squeeze/main libnuma1 amd64 2.0.5-1 [26.7 kB] Get:8 http://archive.debian.org/debian/ squeeze/main libtorque2 amd64 2.4.8+dfsg-9squeeze4 [115 kB] Get:9 http://archive.debian.org/debian/ squeeze/main zlib1g-dev amd64 1:1.2.3.4.dfsg-3 [192 kB] Get:10 http://archive.debian.org/debian/ squeeze/main libibverbs1 amd64 1.1.3-2 [33.7 kB] Get:11 http://archive.debian.org/debian/ squeeze/main libopenmpi1.3 amd64 1.4.2-4 [1400 kB] Get:12 http://archive.debian.org/debian/ squeeze/main libhdf5-openmpi-1.8.4 amd64 1.8.4-patch1-2 [1357 kB] Get:13 http://archive.debian.org/debian/ squeeze/main openmpi-common all 1.4.2-4 [89.5 kB] Get:14 http://archive.debian.org/debian/ squeeze/main libibverbs-dev amd64 1.1.3-2 [83.3 kB] Get:15 http://archive.debian.org/debian/ squeeze/main libopenmpi-dev amd64 1.4.2-4 [2726 kB] Get:16 http://archive.debian.org/debian/ squeeze/main libhdf5-openmpi-dev amd64 1.8.4-patch1-2 [2190 kB] Get:17 http://archive.debian.org/debian/ squeeze/main mpi-default-dev amd64 0.6 [3202 B] Get:18 http://archive.debian.org/debian/ squeeze/main libhdf5-mpi-dev amd64 1.8.4-patch1-2 [18.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.5 MB in 0s (24.5 MB/s) Selecting previously deselected package libc-dev-bin. (Reading database ... 6261 files and directories currently installed.) Unpacking libc-dev-bin (from .../libc-dev-bin_2.11.3-4_amd64.deb) ... Selecting previously deselected package linux-libc-dev. Unpacking linux-libc-dev (from .../linux-libc-dev_2.6.32-48squeeze6_amd64.deb) ... Selecting previously deselected package libc6-dev. Unpacking libc6-dev (from .../libc6-dev_2.11.3-4_amd64.deb) ... Selecting previously deselected package libgfortran3. Unpacking libgfortran3 (from .../libgfortran3_4.4.5-8_amd64.deb) ... Selecting previously deselected package libjpeg62. Unpacking libjpeg62 (from .../libjpeg62_6b1-1_amd64.deb) ... Selecting previously deselected package libjpeg62-dev. Unpacking libjpeg62-dev (from .../libjpeg62-dev_6b1-1_amd64.deb) ... Selecting previously deselected package libnuma1. Unpacking libnuma1 (from .../libnuma1_2.0.5-1_amd64.deb) ... Selecting previously deselected package libtorque2. Unpacking libtorque2 (from .../libtorque2_2.4.8+dfsg-9squeeze4_amd64.deb) ... Selecting previously deselected package zlib1g-dev. Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_amd64.deb) ... Selecting previously deselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.3-2_amd64.deb) ... Selecting previously deselected package libopenmpi1.3. Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.2-4_amd64.deb) ... Selecting previously deselected package libhdf5-openmpi-1.8.4. Unpacking libhdf5-openmpi-1.8.4 (from .../libhdf5-openmpi-1.8.4_1.8.4-patch1-2_amd64.deb) ... Selecting previously deselected package openmpi-common. Unpacking openmpi-common (from .../openmpi-common_1.4.2-4_all.deb) ... Selecting previously deselected package libibverbs-dev. Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.3-2_amd64.deb) ... Selecting previously deselected package libopenmpi-dev. Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.4.2-4_amd64.deb) ... Selecting previously deselected package libhdf5-openmpi-dev. Unpacking libhdf5-openmpi-dev (from .../libhdf5-openmpi-dev_1.8.4-patch1-2_amd64.deb) ... Selecting previously deselected package mpi-default-dev. Unpacking mpi-default-dev (from .../mpi-default-dev_0.6_amd64.deb) ... Selecting previously deselected package libhdf5-mpi-dev. Unpacking libhdf5-mpi-dev (from .../libhdf5-mpi-dev_1.8.4-patch1-2_amd64.deb) ... Setting up libc-dev-bin (2.11.3-4) ... Setting up linux-libc-dev (2.6.32-48squeeze6) ... Setting up libc6-dev (2.11.3-4) ... Setting up libgfortran3 (4.4.5-8) ... Setting up libjpeg62 (6b1-1) ... Setting up libjpeg62-dev (6b1-1) ... Setting up libnuma1 (2.0.5-1) ... Setting up libtorque2 (2.4.8+dfsg-9squeeze4) ... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ... Setting up libibverbs1 (1.1.3-2) ... Setting up libopenmpi1.3 (1.4.2-4) ... Setting up libhdf5-openmpi-1.8.4 (1.8.4-patch1-2) ... Setting up openmpi-common (1.4.2-4) ... Setting up libibverbs-dev (1.1.3-2) ... Setting up libopenmpi-dev (1.4.2-4) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode. Setting up libhdf5-openmpi-dev (1.8.4-patch1-2) ... Setting up mpi-default-dev (0.6) ... Setting up libhdf5-mpi-dev (1.8.4-patch1-2) ... 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-y', 'install', 'libhdf5-mpi-dev'] 0m6.7s INFO: Running scripts post_install 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_install_exceptions'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_install_exceptions'] 0m6.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m7.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m7.1s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp0JFqmO to wheezy-lts 0m7.1s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ wheezy main deb http://security.debian.org wheezy/updates main 0m7.1s INFO: Running scripts pre_distupgrade 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_exceptions'] 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_exceptions'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_wheezy'] 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_wheezy'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', 'update'] 0m8.7s DUMP: Get:1 http://mirror-ubc.debian.org wheezy Release.gpg [2373 B] Ign http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en Get:2 http://mirror-ubc.debian.org wheezy Release [191 kB] Get:3 http://mirror-ubc.debian.org wheezy/main amd64 Packages [7634 kB] Get:4 http://security.debian.org wheezy/updates Release.gpg [1601 B] Ign http://security.debian.org/ wheezy/updates/main Translation-en Get:5 http://security.debian.org wheezy/updates Release [39.0 kB] Get:6 http://security.debian.org wheezy/updates/main amd64 Packages [738 kB] Fetched 8606 kB in 0s (9924 kB/s) Reading package lists... W: There is no public key available for the following key IDs: 7638D0442B90D010 W: There is no public key available for the following key IDs: 9D6D8F6BC857C906 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', 'update'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-yf', 'dist-upgrade'] 0m29.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libhdf5-mpi-dev libhdf5-openmpi-1.8.4 libhdf5-openmpi-dev libjpeg62-dev The following NEW packages will be installed: gcc-4.7-base hdf5-helpers libapt-pkg4.12 libdb5.1 libhdf5-openmpi-7 libjpeg8 liblzma5 libmount1 libpam-modules-bin libquadmath0 libsemanage-common libsemanage1 libtinfo5 libustr-1.0-1 multiarch-support The following packages will be upgraded: adduser apt base-files base-passwd bash bsdutils coreutils dash debconf debconf-i18n debian-archive-keyring debianutils diffutils dpkg e2fslibs e2fsprogs findutils gcc-4.4-base gnupg gpgv grep gzip hostname initscripts insserv libacl1 libattr1 libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcomerr2 libgcc1 libgfortran3 libibverbs-dev libibverbs1 libjpeg62 liblocale-gettext-perl libncurses5 libnuma1 libopenmpi-dev libopenmpi1.3 libpam-modules libpam-runtime libpam0g libreadline6 libselinux1 libsepol1 libslang2 libss2 libstdc++6 libtext-charwidth-perl libtext-iconv-perl libtorque2 libusb-0.1-4 libuuid1 linux-libc-dev login lsb-base mawk mount mpi-default-dev ncurses-base ncurses-bin openmpi-common passwd perl-base readline-common sed sensible-utils sysv-rc sysvinit sysvinit-utils tar tzdata ucf util-linux xz-utils zlib1g zlib1g-dev 82 upgraded, 15 newly installed, 4 to remove and 0 not upgraded. Need to get 47.0 MB of archives. After this operation, 23.4 MB disk space will be freed. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main sensible-utils all 0.0.7 [8850 B] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main debianutils amd64 4.3.2 [78.9 kB] Get:3 http://mirror-ubc.debian.org/debian/ wheezy/main gcc-4.7-base amd64 4.7.2-5 [144 kB] Get:4 http://mirror-ubc.debian.org/debian/ wheezy/main libgcc1 amd64 1:4.7.2-5 [43.1 kB] Get:5 http://mirror-ubc.debian.org/debian/ wheezy/main libsemanage-common all 2.1.6-6 [23.2 kB] Get:6 http://mirror-ubc.debian.org/debian/ wheezy/main libsepol1 amd64 2.1.4-3 [135 kB] Get:7 http://mirror-ubc.debian.org/debian/ wheezy/main libustr-1.0-1 amd64 1.0.4-3 [92.5 kB] Get:8 http://mirror-ubc.debian.org/debian/ wheezy/main libbz2-1.0 amd64 1.0.6-4 [46.5 kB] Get:9 http://mirror-ubc.debian.org/debian/ wheezy/main libselinux1 amd64 2.1.9-5 [90.6 kB] Get:10 http://mirror-ubc.debian.org/debian/ wheezy/main libsemanage1 amd64 2.1.6-6 [102 kB] Get:11 http://mirror-ubc.debian.org/debian/ wheezy/main debconf all 1.5.49 [171 kB] Get:12 http://mirror-ubc.debian.org/debian/ wheezy/main libpam0g amd64 1.1.3-7.1 [128 kB] Get:13 http://mirror-ubc.debian.org/debian/ wheezy/main libpam-modules-bin amd64 1.1.3-7.1 [113 kB] Get:14 http://mirror-ubc.debian.org/debian/ wheezy/main libpam-modules amd64 1.1.3-7.1 [348 kB] Get:15 http://mirror-ubc.debian.org/debian/ wheezy/main libuuid1 amd64 2.20.1-5.3 [57.1 kB] Get:16 http://mirror-ubc.debian.org/debian/ wheezy/main libblkid1 amd64 2.20.1-5.3 [120 kB] Get:17 http://mirror-ubc.debian.org/debian/ wheezy/main libslang2 amd64 2.2.4-15 [551 kB] Get:18 http://mirror-ubc.debian.org/debian/ wheezy/main libtinfo5 amd64 5.9-10 [275 kB] Get:19 http://mirror-ubc.debian.org/debian/ wheezy/main lsb-base all 4.1+Debian8+deb7u1 [26.8 kB] Get:20 http://mirror-ubc.debian.org/debian/ wheezy/main liblzma5 amd64 5.1.1alpha+20120614-2 [202 kB] Get:21 http://mirror-ubc.debian.org/debian/ wheezy/main dpkg amd64 1.16.18 [2665 kB] Get:22 http://security.debian.org/ wheezy/updates/main libc6-dev amd64 2.13-38+deb7u12 [2663 kB] Get:23 http://mirror-ubc.debian.org/debian/ wheezy/main util-linux amd64 2.20.1-5.3 [659 kB] Get:24 http://mirror-ubc.debian.org/debian/ wheezy/main insserv amd64 1.14.0-5 [64.8 kB] Get:25 http://mirror-ubc.debian.org/debian/ wheezy/main sysvinit-utils amd64 2.88dsf-41+deb7u1 [100 kB] Get:26 http://mirror-ubc.debian.org/debian/ wheezy/main sysv-rc all 2.88dsf-41+deb7u1 [81.8 kB] Get:27 http://mirror-ubc.debian.org/debian/ wheezy/main libmount1 amd64 2.20.1-5.3 [120 kB] Get:28 http://mirror-ubc.debian.org/debian/ wheezy/main mount amd64 2.20.1-5.3 [213 kB] Get:29 http://mirror-ubc.debian.org/debian/ wheezy/main libattr1 amd64 1:2.4.46-8 [19.8 kB] Get:30 http://mirror-ubc.debian.org/debian/ wheezy/main libacl1 amd64 2.2.51-8 [30.1 kB] Get:31 http://mirror-ubc.debian.org/debian/ wheezy/main coreutils amd64 8.13-3.5 [5628 kB] Get:32 http://mirror-ubc.debian.org/debian/ wheezy/main initscripts amd64 2.88dsf-41+deb7u1 [91.8 kB] Get:33 http://mirror-ubc.debian.org/debian/ wheezy/main base-files amd64 7.1wheezy11 [67.1 kB] Get:34 http://mirror-ubc.debian.org/debian/ wheezy/main dash amd64 0.5.7-3 [113 kB] Get:35 http://mirror-ubc.debian.org/debian/ wheezy/main diffutils amd64 1:3.2-6 [366 kB] Get:36 http://mirror-ubc.debian.org/debian/ wheezy/main libcomerr2 amd64 1.42.5-1.1+deb7u1 [56.1 kB] Get:37 http://mirror-ubc.debian.org/debian/ wheezy/main e2fslibs amd64 1.42.5-1.1+deb7u1 [197 kB] Get:38 http://mirror-ubc.debian.org/debian/ wheezy/main e2fsprogs amd64 1.42.5-1.1+deb7u1 [979 kB] Get:39 http://mirror-ubc.debian.org/debian/ wheezy/main findutils amd64 4.4.2-4 [694 kB] Get:40 http://mirror-ubc.debian.org/debian/ wheezy/main grep amd64 2.12-2 [454 kB] Get:41 http://mirror-ubc.debian.org/debian/ wheezy/main gzip amd64 1.5-1.1 [119 kB] Get:42 http://mirror-ubc.debian.org/debian/ wheezy/main hostname amd64 3.11 [15.0 kB] Get:43 http://mirror-ubc.debian.org/debian/ wheezy/main ncurses-bin amd64 5.9-10 [335 kB] Get:44 http://mirror-ubc.debian.org/debian/ wheezy/main libtext-charwidth-perl amd64 0.04-7+b1 [11.2 kB] Get:45 http://mirror-ubc.debian.org/debian/ wheezy/main libtext-iconv-perl amd64 1.7-5 [17.6 kB] Get:46 http://mirror-ubc.debian.org/debian/ wheezy/main liblocale-gettext-perl amd64 1.05-7+b1 [20.4 kB] Get:47 http://mirror-ubc.debian.org/debian/ wheezy/main sed amd64 4.2.1-10 [251 kB] Get:48 http://mirror-ubc.debian.org/debian/ wheezy/main sysvinit amd64 2.88dsf-41+deb7u1 [133 kB] Get:49 http://mirror-ubc.debian.org/debian/ wheezy/main base-passwd amd64 3.5.26 [46.3 kB] Get:50 http://mirror-ubc.debian.org/debian/ wheezy/main bsdutils amd64 1:2.20.1-5.3 [85.5 kB] Get:51 http://mirror-ubc.debian.org/debian/ wheezy/main ncurses-base all 5.9-10 [198 kB] Get:52 http://mirror-ubc.debian.org/debian/ wheezy/main libstdc++6 amd64 4.7.2-5 [332 kB] Get:53 http://mirror-ubc.debian.org/debian/ wheezy/main zlib1g-dev amd64 1:1.2.7.dfsg-13 [215 kB] Get:54 http://mirror-ubc.debian.org/debian/ wheezy/main zlib1g amd64 1:1.2.7.dfsg-13 [87.4 kB] Get:55 http://mirror-ubc.debian.org/debian/ wheezy/main debian-archive-keyring all 2014.3~deb7u1 [60.7 kB] Get:56 http://mirror-ubc.debian.org/debian/ wheezy/main readline-common all 6.2+dfsg-0.1 [31.9 kB] Get:57 http://mirror-ubc.debian.org/debian/ wheezy/main libreadline6 amd64 6.2+dfsg-0.1 [166 kB] Get:58 http://mirror-ubc.debian.org/debian/ wheezy/main libusb-0.1-4 amd64 2:0.1.12-20+nmu1 [23.1 kB] Get:59 http://mirror-ubc.debian.org/debian/ wheezy/main libapt-pkg4.12 amd64 0.9.7.9+deb7u7 [891 kB] Get:60 http://mirror-ubc.debian.org/debian/ wheezy/main apt amd64 0.9.7.9+deb7u7 [1262 kB] Get:61 http://mirror-ubc.debian.org/debian/ wheezy/main libncurses5 amd64 5.9-10 [113 kB] Get:62 http://mirror-ubc.debian.org/debian/ wheezy/main libss2 amd64 1.42.5-1.1+deb7u1 [61.4 kB] Get:63 http://mirror-ubc.debian.org/debian/ wheezy/main mawk amd64 1.3.3-17 [90.8 kB] Get:64 http://mirror-ubc.debian.org/debian/ wheezy/main libquadmath0 amd64 4.7.2-5 [125 kB] Get:65 http://mirror-ubc.debian.org/debian/ wheezy/main libgfortran3 amd64 4.7.2-5 [351 kB] Get:66 http://mirror-ubc.debian.org/debian/ wheezy/main libjpeg62 amd64 6b1-3+deb7u1 [96.9 kB] Get:67 http://mirror-ubc.debian.org/debian/ wheezy/main libjpeg8 amd64 8d-1+deb7u1 [138 kB] Get:68 http://mirror-ubc.debian.org/debian/ wheezy/main libpam-runtime all 1.1.3-7.1 [228 kB] Get:69 http://security.debian.org/ wheezy/updates/main libc-dev-bin amd64 2.13-38+deb7u12 [228 kB] Get:70 http://mirror-ubc.debian.org/debian/ wheezy/main xz-utils amd64 5.1.1alpha+20120614-2 [237 kB] Get:71 http://mirror-ubc.debian.org/debian/ wheezy/main adduser all 3.113+nmu3 [264 kB] Get:72 http://mirror-ubc.debian.org/debian/ wheezy/main debconf-i18n all 1.5.49 [237 kB] Get:73 http://mirror-ubc.debian.org/debian/ wheezy/main ucf all 3.0025+nmu3 [70.8 kB] Get:74 http://mirror-ubc.debian.org/debian/ wheezy/main gcc-4.4-base amd64 4.4.7-2 [127 kB] Get:75 http://security.debian.org/ wheezy/updates/main libc-bin amd64 2.13-38+deb7u12 [1275 kB] Get:76 http://mirror-ubc.debian.org/debian/ wheezy/main libnuma1 amd64 2.0.8~rc4-1 [33.7 kB] Get:77 http://mirror-ubc.debian.org/debian/ wheezy/main libtorque2 amd64 2.4.16+dfsg-1+deb7u4 [121 kB] Get:78 http://mirror-ubc.debian.org/debian/ wheezy/main libopenmpi-dev amd64 1.4.5-1 [2778 kB] Get:79 http://security.debian.org/ wheezy/updates/main libc6 amd64 2.13-38+deb7u12 [4226 kB] Get:80 http://mirror-ubc.debian.org/debian/ wheezy/main openmpi-common all 1.4.5-1 [101 kB] Get:81 http://mirror-ubc.debian.org/debian/ wheezy/main libibverbs-dev amd64 1.1.6-1 [84.8 kB] Get:82 http://mirror-ubc.debian.org/debian/ wheezy/main libibverbs1 amd64 1.1.6-1 [35.3 kB] Get:83 http://mirror-ubc.debian.org/debian/ wheezy/main libopenmpi1.3 amd64 1.4.5-1 [1436 kB] Get:84 http://security.debian.org/ wheezy/updates/main linux-libc-dev amd64 3.2.93-1 [874 kB] Get:85 http://security.debian.org/ wheezy/updates/main multiarch-support amd64 2.13-38+deb7u12 [152 kB] Get:86 http://security.debian.org/ wheezy/updates/main libdb5.1 amd64 5.1.29-5+deb7u1 [723 kB] Get:87 http://security.debian.org/ wheezy/updates/main passwd amd64 1:4.1.5.1-1+deb7u1 [1262 kB] Get:88 http://mirror-ubc.debian.org/debian/ wheezy/main mpi-default-dev amd64 1.0.1 [3604 B] Get:89 http://security.debian.org/ wheezy/updates/main tzdata all 2017c-0+deb7u1 [493 kB] Get:90 http://security.debian.org/ wheezy/updates/main bash amd64 4.2+dfsg-0.1+deb7u4 [1499 kB] Get:91 http://security.debian.org/ wheezy/updates/main login amd64 1:4.1.5.1-1+deb7u1 [984 kB] Get:92 http://security.debian.org/ wheezy/updates/main perl-base amd64 5.14.2-21+deb7u5 [1534 kB] Get:93 http://security.debian.org/ wheezy/updates/main tar amd64 1.26+dfsg-0.1+deb7u1 [984 kB] Get:94 http://security.debian.org/ wheezy/updates/main gpgv amd64 1.4.12-7+deb7u9 [229 kB] Get:95 http://security.debian.org/ wheezy/updates/main gnupg amd64 1.4.12-7+deb7u9 [1954 kB] Get:96 http://security.debian.org/ wheezy/updates/main hdf5-helpers amd64 1.8.8-9+deb7u1 [32.9 kB] Get:97 http://security.debian.org/ wheezy/updates/main libhdf5-openmpi-7 amd64 1.8.8-9+deb7u1 [1463 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 47.0 MB in 0s (58.9 MB/s) (Reading database ... 8387 files and directories currently installed.) Removing libhdf5-mpi-dev ... Removing libhdf5-openmpi-dev ... Removing libhdf5-openmpi-1.8.4 ... Removing libjpeg62-dev ... (Reading database ... 8268 files and directories currently installed.) Preparing to replace sensible-utils 0.0.4 (using .../sensible-utils_0.0.7_all.deb) ... Unpacking replacement sensible-utils ... Setting up sensible-utils (0.0.7) ... (Reading database ... 8280 files and directories currently installed.) Preparing to replace debianutils 3.4 (using .../debianutils_4.3.2_amd64.deb) ... Unpacking replacement debianutils ... Setting up debianutils (4.3.2) ... (Reading database ... 8306 files and directories currently installed.) Preparing to replace libc6-dev 2.11.3-4 (using .../libc6-dev_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-dev-bin 2.11.3-4 (using .../libc-dev-bin_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc-dev-bin ... 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(Reading database ... 8412 files and directories currently installed.) Preparing to replace debconf 1.5.36.1 (using .../debconf_1.5.49_all.deb) ... Unpacking replacement debconf ... Setting up debconf (1.5.49) ... (Reading database ... 8415 files and directories currently installed.) Preparing to replace libpam0g 1.1.1-6.1+squeeze1 (using .../libpam0g_1.1.3-7.1_amd64.deb) ... Unpacking replacement libpam0g ... Setting up libpam0g (1.1.3-7.1) ... Checking for services that may need to be restarted...Checking init scripts... Nothing to restart. Selecting previously deselected package libdb5.1. (Reading database ... 8415 files and directories currently installed.) Unpacking libdb5.1 (from .../libdb5.1_5.1.29-5+deb7u1_amd64.deb) ... Setting up libdb5.1 (5.1.29-5+deb7u1) ... Selecting previously deselected package libpam-modules-bin. (Reading database ... 8421 files and directories currently installed.) Unpacking libpam-modules-bin (from .../libpam-modules-bin_1.1.3-7.1_amd64.deb) ... 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Preparing to replace tzdata 2014e-0squeeze1 (using .../tzdata_2017c-0+deb7u1_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2017c-0+deb7u1) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Dec 4 14:53:19 UTC 2017. Universal Time is now: Mon Dec 4 14:53:19 UTC 2017. Run 'dpkg-reconfigure tzdata' if you wish to change it. Selecting previously deselected package liblzma5. (Reading database ... 8495 files and directories currently installed.) Unpacking liblzma5 (from .../liblzma5_5.1.1alpha+20120614-2_amd64.deb) ... Setting up liblzma5 (5.1.1alpha+20120614-2) ... (Reading database ... 8504 files and directories currently installed.) Preparing to replace dpkg 1.15.11 (using .../dpkg_1.16.18_amd64.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.16.18) ... (Reading database ... 8525 files and directories currently installed.) Preparing to replace util-linux 2.17.2-9 (using .../util-linux_2.20.1-5.3_amd64.deb) ... 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Installing new version of config file /etc/network/if-up.d/mountnfs ... guest environment detected: Linking /run to /var/run guest environment detected: Linking /run/lock to /var/lock guest environment detected: Linking /run/shm to /dev/shm (Reading database ... 8443 files and directories currently installed.) Preparing to replace base-files 6.0squeeze10 (using .../base-files_7.1wheezy11_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (7.1wheezy11) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Updating /etc/profile to current default. (Reading database ... 8446 files and directories currently installed.) Preparing to replace bash 4.1-3 (using .../bash_4.2+dfsg-0.1+deb7u4_amd64.deb) ... Unpacking replacement bash ... Setting up bash (4.2+dfsg-0.1+deb7u4) ... Installing new version of config file /etc/bash.bashrc ... 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Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.7.dfsg-13_amd64.deb) ... Unpacking replacement zlib1g:amd64 ... Setting up zlib1g:amd64 (1:1.2.7.dfsg-13) ... (Reading database ... 8896 files and directories currently installed.) Preparing to replace gpgv 1.4.10-4+squeeze4 (using .../gpgv_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.12-7+deb7u9) ... (Reading database ... 8896 files and directories currently installed.) Preparing to replace debian-archive-keyring 2010.08.28+squeeze1 (using .../debian-archive-keyring_2014.3~deb7u1_all.deb) ... Unpacking replacement debian-archive-keyring ... Setting up debian-archive-keyring (2014.3~deb7u1) ... (Reading database ... 8903 files and directories currently installed.) Preparing to replace readline-common 6.1-3 (using .../readline-common_6.2+dfsg-0.1_all.deb) ... Unpacking replacement readline-common ... Setting up readline-common (6.2+dfsg-0.1) ... (Reading database ... 8902 files and directories currently installed.) Preparing to replace libreadline6 6.1-3 (using .../libreadline6_6.2+dfsg-0.1_amd64.deb) ... Unpacking replacement libreadline6:amd64 ... Setting up libreadline6:amd64 (6.2+dfsg-0.1) ... (Reading database ... 8902 files and directories currently installed.) Preparing to replace libusb-0.1-4 2:0.1.12-16 (using .../libusb-0.1-4_2%3a0.1.12-20+nmu1_amd64.deb) ... Unpacking replacement libusb-0.1-4:amd64 ... Setting up libusb-0.1-4:amd64 (2:0.1.12-20+nmu1) ... (Reading database ... 8901 files and directories currently installed.) Preparing to replace gnupg 1.4.10-4+squeeze4 (using .../gnupg_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.12-7+deb7u9) ... Selecting previously unselected package libapt-pkg4.12:amd64. dpkg: considering deconfiguration of apt, which would be broken by installation of libapt-pkg4.12:amd64 ... dpkg: yes, will deconfigure apt (broken by libapt-pkg4.12:amd64) (Reading database ... 8890 files and directories currently installed.) Unpacking libapt-pkg4.12:amd64 (from .../libapt-pkg4.12_0.9.7.9+deb7u7_amd64.deb) ... De-configuring apt ... Setting up libapt-pkg4.12:amd64 (0.9.7.9+deb7u7) ... (Reading database ... 8938 files and directories currently installed.) Preparing to replace apt 0.8.10.3+squeeze1 (using .../apt_0.9.7.9+deb7u7_amd64.deb) ... Unpacking replacement apt ... Setting up apt (0.9.7.9+deb7u7) ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... Installing new version of config file /etc/cron.daily/apt ... gpg: key B98321F9: "Squeeze Stable Release Key " not changed gpg: key 473041FA: "Debian Archive Automatic Signing Key (6.0/squeeze) " not changed gpg: key 65FFB764: "Wheezy Stable Release Key " not changed gpg: key 46925553: "Debian Archive Automatic Signing Key (7.0/wheezy) " not changed gpg: key 518E17E1: "Jessie Stable Release Key " not changed gpg: key 2B90D010: "Debian Archive Automatic Signing Key (8/jessie) " not changed gpg: key C857C906: "Debian Security Archive Automatic Signing Key (8/jessie) " not changed gpg: Total number processed: 7 gpg: unchanged: 7 gpg: checking the trustdb gpg: WARNING: digest algorithm MD5 is deprecated gpg: please see http://www.gnupg.org/faq/weak-digest-algos.html for more information gpg: no ultimately trusted keys found (Reading database ... 8849 files and directories currently installed.) Preparing to replace libncurses5 5.7+20100313-5 (using .../libncurses5_5.9-10_amd64.deb) ... Unpacking replacement libncurses5:amd64 ... Setting up libncurses5:amd64 (5.9-10) ... (Reading database ... 8841 files and directories currently installed.) Preparing to replace libss2 1.41.12-4stable1 (using .../libss2_1.42.5-1.1+deb7u1_amd64.deb) ... Unpacking replacement libss2:amd64 ... Setting up libss2:amd64 (1.42.5-1.1+deb7u1) ... (Reading database ... 8841 files and directories currently installed.) Preparing to replace mawk 1.3.3-15 (using .../mawk_1.3.3-17_amd64.deb) ... Unpacking replacement mawk ... Selecting previously unselected package libquadmath0:amd64. Unpacking libquadmath0:amd64 (from .../libquadmath0_4.7.2-5_amd64.deb) ... Preparing to replace libgfortran3 4.4.5-8 (using .../libgfortran3_4.7.2-5_amd64.deb) ... Unpacking replacement libgfortran3:amd64 ... Preparing to replace libjpeg62 6b1-1 (using .../libjpeg62_6b1-3+deb7u1_amd64.deb) ... Unpacking replacement libjpeg62:amd64 ... Selecting previously unselected package libjpeg8:amd64. Unpacking libjpeg8:amd64 (from .../libjpeg8_8d-1+deb7u1_amd64.deb) ... Preparing to replace libpam-runtime 1.1.1-6.1+squeeze1 (using .../libpam-runtime_1.1.3-7.1_all.deb) ... Unpacking replacement libpam-runtime ... Setting up libpam-runtime (1.1.3-7.1) ... (Reading database ... 8853 files and directories currently installed.) Preparing to replace xz-utils 5.0.0-2 (using .../xz-utils_5.1.1alpha+20120614-2_amd64.deb) ... Unpacking replacement xz-utils ... Setting up xz-utils (5.1.1alpha+20120614-2) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode (Reading database ... 8855 files and directories currently installed.) Preparing to replace adduser 3.112+nmu2 (using .../adduser_3.113+nmu3_all.deb) ... Unpacking replacement adduser ... Preparing to replace debconf-i18n 1.5.36.1 (using .../debconf-i18n_1.5.49_all.deb) ... Unpacking replacement debconf-i18n ... Preparing to replace ucf 3.0025+nmu1 (using .../ucf_3.0025+nmu3_all.deb) ... Unpacking replacement ucf ... Preparing to replace gcc-4.4-base 4.4.5-8 (using .../gcc-4.4-base_4.4.7-2_amd64.deb) ... Unpacking replacement gcc-4.4-base:amd64 ... Selecting previously unselected package hdf5-helpers. Unpacking hdf5-helpers (from .../hdf5-helpers_1.8.8-9+deb7u1_amd64.deb) ... Preparing to replace libnuma1 2.0.5-1 (using .../libnuma1_2.0.8~rc4-1_amd64.deb) ... Unpacking replacement libnuma1 ... Preparing to replace libtorque2 2.4.8+dfsg-9squeeze4 (using .../libtorque2_2.4.16+dfsg-1+deb7u4_amd64.deb) ... Unpacking replacement libtorque2 ... Preparing to replace libopenmpi-dev 1.4.2-4 (using .../libopenmpi-dev_1.4.5-1_amd64.deb) ... Unpacking replacement libopenmpi-dev ... Preparing to replace openmpi-common 1.4.2-4 (using .../openmpi-common_1.4.5-1_all.deb) ... Unpacking replacement openmpi-common ... Preparing to replace libibverbs-dev 1.1.3-2 (using .../libibverbs-dev_1.1.6-1_amd64.deb) ... Unpacking replacement libibverbs-dev ... Preparing to replace libibverbs1 1.1.3-2 (using .../libibverbs1_1.1.6-1_amd64.deb) ... Unpacking replacement libibverbs1 ... Preparing to replace libopenmpi1.3 1.4.2-4 (using .../libopenmpi1.3_1.4.5-1_amd64.deb) ... Unpacking replacement libopenmpi1.3 ... Selecting previously unselected package libhdf5-openmpi-7. Unpacking libhdf5-openmpi-7 (from .../libhdf5-openmpi-7_1.8.8-9+deb7u1_amd64.deb) ... Preparing to replace mpi-default-dev 0.6 (using .../mpi-default-dev_1.0.1_amd64.deb) ... Unpacking replacement mpi-default-dev ... Setting up libc-dev-bin (2.13-38+deb7u12) ... Setting up linux-libc-dev:amd64 (3.2.93-1) ... Setting up libc6-dev:amd64 (2.13-38+deb7u12) ... Setting up libtext-charwidth-perl (0.04-7+b1) ... Setting up libtext-iconv-perl (1.7-5) ... Setting up liblocale-gettext-perl (1.05-7+b1) ... Setting up zlib1g-dev:amd64 (1:1.2.7.dfsg-13) ... Setting up mawk (1.3.3-17) ... Setting up libquadmath0:amd64 (4.7.2-5) ... Setting up libgfortran3:amd64 (4.7.2-5) ... Setting up libjpeg62:amd64 (6b1-3+deb7u1) ... Setting up libjpeg8:amd64 (8d-1+deb7u1) ... Setting up adduser (3.113+nmu3) ... Installing new version of config file /etc/deluser.conf ... Setting up debconf-i18n (1.5.49) ... Setting up ucf (3.0025+nmu3) ... Setting up gcc-4.4-base:amd64 (4.4.7-2) ... Setting up hdf5-helpers (1.8.8-9+deb7u1) ... Setting up libnuma1 (2.0.8~rc4-1) ... Setting up libtorque2 (2.4.16+dfsg-1+deb7u4) ... Setting up libibverbs1 (1.1.6-1) ... Setting up libopenmpi1.3 (1.4.5-1) ... Setting up openmpi-common (1.4.5-1) ... Setting up libibverbs-dev (1.1.6-1) ... Setting up libopenmpi-dev (1.4.5-1) ... Setting up libhdf5-openmpi-7 (1.8.8-9+deb7u1) ... Setting up mpi-default-dev (1.0.1) ... 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-yf', 'dist-upgrade'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m31.1s DUMP: a810cee0a091d9ca5580bdbdea1aa7e5 - 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'show', 'libhdf5-mpi-dev'] 0m31.1s DUMP: Package: libhdf5-mpi-dev Source: hdf5 Version: 1.8.8-9+deb7u1 Installed-Size: 49 Maintainer: Debian GIS Project Architecture: amd64 Depends: libhdf5-openmpi-dev, mpi-default-dev Description: Hierarchical Data Format 5 (HDF5) - development files - MPICH2 version Homepage: http://hdfgroup.org/HDF5/ Description-md5: c00c4d19e21699e8eaa1eaadcde831cb Section: libdevel Priority: extra Filename: pool/updates/main/h/hdf5/libhdf5-mpi-dev_1.8.8-9+deb7u1_amd64.deb Size: 24494 MD5sum: 783a72b8f2278b491e91481b6797fed3 SHA1: e5d1d05111cb6a6b4a7dbc01eba2cd4531761060 SHA256: 87d01229f852685912fc2dfa36632551e3af878a4b96b89b8b473bb55bc265de Package: libhdf5-mpi-dev Source: hdf5 (1.8.8-9) Version: 1.8.8-9+b1 Installed-Size: 49 Maintainer: Debian GIS Project Architecture: amd64 Depends: libhdf5-openmpi-dev, mpi-default-dev Description: Hierarchical Data Format 5 (HDF5) - development files - MPICH2 version Homepage: http://hdfgroup.org/HDF5/ Description-md5: c00c4d19e21699e8eaa1eaadcde831cb Tag: devel::library, role::devel-lib Section: libdevel Priority: extra Filename: pool/main/h/hdf5/libhdf5-mpi-dev_1.8.8-9+b1_amd64.deb Size: 24400 MD5sum: 248f2a924b9099efcde8f92e3b62765f SHA1: d5aa37b4f0d21bc45061dac99e20d667256f6ace SHA256: eeaf2c7b20e5e10f5a849e3ffcc1e1f485a1b18a015a6444bea95ac93f3a38f9 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'show', 'libhdf5-mpi-dev'] 0m31.1s INFO: apt-cache knows about the following packages: libhdf5-mpi-dev 0m31.1s INFO: Running scripts pre_install 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_database-server'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_database-server'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_exceptions'] 0m31.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_exceptions'] 0m31.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_extras'] 0m31.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_extras'] 0m31.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture'] 0m31.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture'] 0m31.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m31.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m31.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy'] 0m31.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m31.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy'] 0m31.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy', 'libhdf5-mpi-dev'] 0m31.2s DUMP: libhdf5-mpi-dev: Installed: (none) Candidate: 1.8.8-9+deb7u1 Version table: 1.8.8-9+deb7u1 0 500 http://security.debian.org/ wheezy/updates/main amd64 Packages 1.8.8-9+b1 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 0m31.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy', 'libhdf5-mpi-dev'] 0m31.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-y', 'install', 'libhdf5-mpi-dev'] 0m32.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libjpeg62 Use 'apt-get autoremove' to remove it. The following extra packages will be installed: libhdf5-openmpi-dev libjpeg8-dev Suggested packages: libhdf5-doc The following NEW packages will be installed: libhdf5-mpi-dev libhdf5-openmpi-dev libjpeg8-dev 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 2842 kB of archives. After this operation, 20.2 MB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main libjpeg8-dev amd64 8d-1+deb7u1 [245 kB] Get:2 http://security.debian.org/ wheezy/updates/main libhdf5-openmpi-dev amd64 1.8.8-9+deb7u1 [2573 kB] Get:3 http://security.debian.org/ wheezy/updates/main libhdf5-mpi-dev amd64 1.8.8-9+deb7u1 [24.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2842 kB in 0s (6436 kB/s) Selecting previously unselected package libjpeg8-dev:amd64. (Reading database ... 8905 files and directories currently installed.) Unpacking libjpeg8-dev:amd64 (from .../libjpeg8-dev_8d-1+deb7u1_amd64.deb) ... Selecting previously unselected package libhdf5-openmpi-dev. Unpacking libhdf5-openmpi-dev (from .../libhdf5-openmpi-dev_1.8.8-9+deb7u1_amd64.deb) ... Selecting previously unselected package libhdf5-mpi-dev. Unpacking libhdf5-mpi-dev (from .../libhdf5-mpi-dev_1.8.8-9+deb7u1_amd64.deb) ... Setting up libjpeg8-dev:amd64 (8d-1+deb7u1) ... Setting up libhdf5-openmpi-dev (1.8.8-9+deb7u1) ... Setting up libhdf5-mpi-dev (1.8.8-9+deb7u1) ... 0m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-y', 'install', 'libhdf5-mpi-dev'] 0m32.5s INFO: Running scripts post_install 0m32.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_install_exceptions'] 0m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_install_exceptions'] 0m32.5s INFO: Running scripts post_distupgrade 0m32.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m32.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_exceptions'] 0m32.5s DUMP: FIXING /usr/share/keyrings/debian-archive-removed-keys.gpg~ `/usr/share/keyrings/debian-archive-removed-keys.gpg~' -> `/usr/share/keyrings/debian-archive-removed-keys.gpg' 0m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_exceptions'] 0m32.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m32.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m32.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_zz_backports'] 0m32.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_distupgrade_zz_backports'] 0m32.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m32.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m32.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m33.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m33.3s INFO: Running scripts pre_install 0m33.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_database-server'] 0m33.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_database-server'] 0m33.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_exceptions'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_exceptions'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_extras'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_extras'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy'] 0m33.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy', 'libhdf5-mpi-dev'] 0m33.4s DUMP: libhdf5-mpi-dev: Installed: 1.8.8-9+deb7u1 Candidate: 1.8.8-9+deb7u1 Version table: *** 1.8.8-9+deb7u1 0 500 http://security.debian.org/ wheezy/updates/main amd64 Packages 100 /var/lib/dpkg/status 1.8.8-9+b1 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-cache', 'policy', 'libhdf5-mpi-dev'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-y', 'install', 'libhdf5-mpi-dev=1.8.8-9+deb7u1'] 0m33.7s DUMP: Reading package lists... Building dependency tree... Reading state information... libhdf5-mpi-dev is already the newest version. The following package was automatically installed and is no longer required: libjpeg62 Use 'apt-get autoremove' to remove it. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', '-y', 'install', 'libhdf5-mpi-dev=1.8.8-9+deb7u1'] 0m33.7s INFO: Running scripts post_install 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_install_exceptions'] 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_install_exceptions'] 0m33.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m34.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m34.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m34.0s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u4 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.4-base:amd64 gcc-4.4-base 4.4.7-2 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u9 install ok installed gpgv gpgv 1.4.12-7+deb7u9 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hdf5-helpers hdf5-helpers 1.8.8-9+deb7u1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u12 install ok installed libc-dev-bin libc-dev-bin 2.13-38+deb7u12 install ok installed libc6:amd64 libc6 2.13-38+deb7u12 install ok installed libc6-dev:amd64 libc6-dev 2.13-38+deb7u12 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb4.8 libdb4.8 4.8.30-2 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5+deb7u1 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed libgfortran3:amd64 libgfortran3 4.7.2-5 install ok installed libhdf5-mpi-dev libhdf5-mpi-dev 1.8.8-9+deb7u1 deinstall ok config-files libhdf5-openmpi-1.8.4 libhdf5-openmpi-1.8.4 1.8.4-patch1-2 install ok installed libhdf5-openmpi-7 libhdf5-openmpi-7 1.8.8-9+deb7u1 install ok installed libhdf5-openmpi-dev libhdf5-openmpi-dev 1.8.8-9+deb7u1 install ok installed libibverbs-dev libibverbs-dev 1.1.6-1 install ok installed libibverbs1 libibverbs1 1.1.6-1 install ok installed libjpeg62:amd64 libjpeg62 6b1-3+deb7u1 install ok installed libjpeg8:amd64 libjpeg8 8d-1+deb7u1 install ok installed libjpeg8-dev:amd64 libjpeg8-dev 8d-1+deb7u1 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma2 liblzma2 5.0.0-2 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libnuma1 libnuma1 2.0.8~rc4-1 install ok installed libopenmpi-dev libopenmpi-dev 1.4.5-1 install ok installed libopenmpi1.3 libopenmpi1.3 1.4.5-1 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libquadmath0:amd64 libquadmath0 4.7.2-5 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libtorque2 libtorque2 2.4.16+dfsg-1+deb7u4 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed linux-libc-dev:amd64 linux-libc-dev 3.2.93-1 install ok installed login login 1:4.1.5.1-1+deb7u1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed mpi-default-dev mpi-default-dev 1.0.1 install ok installed multiarch-support multiarch-support 2.13-38+deb7u12 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed openmpi-common openmpi-common 1.4.5-1 install ok installed passwd passwd 1:4.1.5.1-1+deb7u1 install ok installed perl-base perl-base 5.14.2-21+deb7u5 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1+deb7u1 install ok installed tzdata tzdata 2017c-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.2.7.dfsg-13 0m34.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m34.5s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', '-ac', '--ignore-obsolete'] 0m35.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', '-ac', '--ignore-obsolete'] 0m35.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.2s DUMP: 0.15.1 0m35.2s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.2s INFO: Running adequate version 0.15.1 now. 0m35.2s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'libhdf5-mpi-dev'] 0m35.3s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'libhdf5-mpi-dev'] 0m35.3s INFO: Running scripts pre_remove 0m35.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m35.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m35.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m35.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m35.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m36.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m36.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m36.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m36.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m36.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m36.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_exceptions'] 0m36.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/pre_remove_exceptions'] 0m36.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', 'remove', 'openmpi-common', 'gcc-4.4-base:amd64', 'libopenmpi-dev', 'libjpeg8:amd64', 'zlib1g-dev:amd64', 'libnuma1', 'libgfortran3:amd64', 'libopenmpi1.3', 'libquadmath0:amd64', 'libhdf5-openmpi-dev', 'libc6-dev:amd64', 'libibverbs1', 'mpi-default-dev', 'hdf5-helpers', 'libjpeg8-dev:amd64', 'libibverbs-dev', 'libtorque2', 'libjpeg62:amd64', 'linux-libc-dev:amd64', 'libhdf5-openmpi-1.8.4', 'libc-dev-bin', 'libdb4.8', 'libhdf5-openmpi-7', 'libhdf5-mpi-dev'] 0m37.0s DUMP: Reading package lists... Building dependency tree... Reading state information... Package 'libhdf5-openmpi-1.8.4' is not installed, so not removed The following packages will be REMOVED: gcc-4.4-base hdf5-helpers libc-dev-bin libc6-dev libdb4.8 libgfortran3 libhdf5-mpi-dev libhdf5-openmpi-7 libhdf5-openmpi-dev libibverbs-dev libibverbs1 libjpeg62 libjpeg8 libjpeg8-dev libnuma1 libopenmpi-dev libopenmpi1.3 libquadmath0 libtorque2 linux-libc-dev mpi-default-dev openmpi-common zlib1g-dev 0 upgraded, 0 newly installed, 23 to remove and 0 not upgraded. After this operation, 60.3 MB disk space will be freed. (Reading database ... 9014 files and directories currently installed.) Removing gcc-4.4-base:amd64 ... Removing libhdf5-mpi-dev ... Removing libhdf5-openmpi-dev ... Removing hdf5-helpers ... Removing zlib1g-dev:amd64 ... Removing libjpeg8-dev:amd64 ... Removing libc6-dev:amd64 ... Removing libc-dev-bin ... Removing libdb4.8 ... Removing libhdf5-openmpi-7 ... Removing mpi-default-dev ... Removing libopenmpi-dev ... Removing libopenmpi1.3 ... Removing libgfortran3:amd64 ... Removing libibverbs-dev ... Removing libibverbs1 ... Removing libjpeg62:amd64 ... Removing libjpeg8:amd64 ... Removing libnuma1 ... Removing libquadmath0:amd64 ... Removing libtorque2 ... Removing linux-libc-dev:amd64 ... Removing openmpi-common ... 0m37.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', 'remove', 'openmpi-common', 'gcc-4.4-base:amd64', 'libopenmpi-dev', 'libjpeg8:amd64', 'zlib1g-dev:amd64', 'libnuma1', 'libgfortran3:amd64', 'libopenmpi1.3', 'libquadmath0:amd64', 'libhdf5-openmpi-dev', 'libc6-dev:amd64', 'libibverbs1', 'mpi-default-dev', 'hdf5-helpers', 'libjpeg8-dev:amd64', 'libibverbs-dev', 'libtorque2', 'libjpeg62:amd64', 'linux-libc-dev:amd64', 'libhdf5-openmpi-1.8.4', 'libc-dev-bin', 'libdb4.8', 'libhdf5-openmpi-7', 'libhdf5-mpi-dev'] 0m37.0s INFO: Running scripts post_remove 0m37.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_remove_exceptions'] 0m37.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_remove_exceptions'] 0m37.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg', '--purge', 'openmpi-common', 'gcc-4.4-base:amd64', 'libopenmpi-dev', 'libjpeg8:amd64', 'zlib1g-dev:amd64', 'libnuma1', 'libgfortran3:amd64', 'libopenmpi1.3', 'libquadmath0:amd64', 'libhdf5-openmpi-dev', 'libc6-dev:amd64', 'libibverbs1', 'mpi-default-dev', 'hdf5-helpers', 'libjpeg8-dev:amd64', 'libibverbs-dev', 'libtorque2', 'libjpeg62:amd64', 'linux-libc-dev:amd64', 'libhdf5-openmpi-1.8.4', 'libc-dev-bin', 'libdb4.8', 'libhdf5-openmpi-7'] 0m37.0s DUMP: dpkg: warning: ignoring request to remove openmpi-common which isn't installed dpkg: warning: ignoring request to remove gcc-4.4-base which isn't installed dpkg: warning: ignoring request to remove libopenmpi-dev which isn't installed dpkg: warning: ignoring request to remove libjpeg8 which isn't installed dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed (Reading database ... 6792 files and directories currently installed.) Removing libnuma1 ... Purging configuration files for libnuma1 ... Removing libgfortran3:amd64 ... Purging configuration files for libgfortran3:amd64 ... Removing libopenmpi1.3 ... Purging configuration files for libopenmpi1.3 ... Removing libquadmath0:amd64 ... Purging configuration files for libquadmath0:amd64 ... dpkg: warning: ignoring request to remove libhdf5-openmpi-dev which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed Removing libibverbs1 ... Purging configuration files for libibverbs1 ... dpkg: warning: ignoring request to remove mpi-default-dev which isn't installed dpkg: warning: ignoring request to remove hdf5-helpers which isn't installed dpkg: warning: ignoring request to remove libjpeg8-dev which isn't installed dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed Removing libtorque2 ... Purging configuration files for libtorque2 ... dpkg: warning: ignoring request to remove libjpeg62 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed Removing libhdf5-openmpi-1.8.4 ... Purging configuration files for libhdf5-openmpi-1.8.4 ... dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libdb4.8 which isn't installed Removing libhdf5-openmpi-7 ... Purging configuration files for libhdf5-openmpi-7 ... 0m37.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg', '--purge', 'openmpi-common', 'gcc-4.4-base:amd64', 'libopenmpi-dev', 'libjpeg8:amd64', 'zlib1g-dev:amd64', 'libnuma1', 'libgfortran3:amd64', 'libopenmpi1.3', 'libquadmath0:amd64', 'libhdf5-openmpi-dev', 'libc6-dev:amd64', 'libibverbs1', 'mpi-default-dev', 'hdf5-helpers', 'libjpeg8-dev:amd64', 'libibverbs-dev', 'libtorque2', 'libjpeg62:amd64', 'linux-libc-dev:amd64', 'libhdf5-openmpi-1.8.4', 'libc-dev-bin', 'libdb4.8', 'libhdf5-openmpi-7'] 0m37.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg', '--purge', 'libhdf5-mpi-dev'] 0m37.1s DUMP: dpkg: warning: ignoring request to remove libhdf5-mpi-dev which isn't installed 0m37.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg', '--purge', 'libhdf5-mpi-dev'] 0m37.1s INFO: Running scripts post_purge 0m37.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_purge_exceptions'] 0m37.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_purge_exceptions'] 0m37.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg', '--purge', '--pending'] 0m37.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg', '--purge', '--pending'] 0m37.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg', '--remove', '--pending'] 0m37.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg', '--remove', '--pending'] 0m37.1s INFO: Running scripts post_test 0m37.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_test_exceptions'] 0m37.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'tmp/scripts/post_test_exceptions'] 0m37.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m37.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m37.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg-divert', '--list'] 0m37.5s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m37.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'dpkg-divert', '--list'] 0m37.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', 'clean'] 0m37.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0JFqmO', 'apt-get', 'clean'] 0m37.5s DEBUG: Recording chroot state 0m38.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/shm'] 0m38.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/shm'] 0m38.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/console'] 0m38.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/console'] 0m38.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/ptmx'] 0m38.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/ptmx'] 0m38.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/pts'] 0m38.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/dev/pts'] 0m38.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/proc'] 0m38.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0JFqmO/proc'] 0m38.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m38.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp0JFqmO'] 0m38.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp0JFqmO 0m38.6s INFO: PASS: Upgrading between Debian distributions. 0m38.6s INFO: PASS: All tests. 0m38.6s INFO: piuparts run ends. ret=0 End: 2017-12-04 14:53:33 UTC