Start: 2018-02-02 21:18:50 UTC [squeeze] Package: libminc-dev Priority: optional Section: libdevel Installed-Size: 1980 Maintainer: Debian Med Packaging Team Architecture: amd64 Source: minc Version: 2.0.18+cvs20100518-1 Replaces: libminc0-dev Depends: libminc2-1 (= 2.0.18+cvs20100518-1), libnetcdf-dev, libhdf5-openmpi-dev Conflicts: libminc0-dev Filename: pool/main/m/minc/libminc-dev_2.0.18+cvs20100518-1_amd64.deb Size: 875758 MD5sum: 4bf4ecb6af0447c2ada5197f26db573d SHA1: e9c708c2c215aa1b55e507c0d45b554225e5b0cb SHA256: 86e61134730c13de7bbf15bfb15aaee7b275092fbf40bab483fb643268f2c8cd Description: MNI medical image format development environment This package contains the library and headers for libminc2 and libvolume_io2. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Tag: field::medicine, field::medicine:imaging, implemented-in::c, qa::low-popcon, role::devel-lib [wheezy-lts] Package: libminc-dev Source: minc (2.1.10-1) Version: 2.1.10-1+b1 Installed-Size: 1716 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: libminc0-dev Depends: libminc2-1 (= 2.1.10-1+b1), libnetcdf-dev, libhdf5-dev Conflicts: libminc0-dev Description: MNI medical image format development environment Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Description-md5: 5c57f172bada7cef7c79824fa62b2d63 Tag: field::medicine, field::medicine:imaging, implemented-in::c, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/m/minc/libminc-dev_2.1.10-1+b1_amd64.deb Size: 883190 MD5sum: 5e9412a0f6843b42fe5dc0e3fa2d588c SHA1: ab21693a4f47e82d30765978ec983506cc0e498a SHA256: e9746a9e6dbd12835523e985a533547e8aea69ced8a7fc5d2e1a8caa835423fa Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --no-check-valid-until --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze -d wheezy-lts -B reference-chroot-metadata.dat --apt libminc-dev=2.1.10-1+b1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.84~201801121530~0.83-4-g6e16ed9a starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge -i /etc/shells --no-check-valid-until --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz -d squeeze -d wheezy-lts -B reference-chroot-metadata.dat --apt libminc-dev=2.1.10-1+b1 0m0.0s INFO: Running on: Linux piu-slave-bm-a 4.9.0-5-amd64 #1 SMP Debian 4.9.65-3+deb9u2 (2018-01-04) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpHO3CVe 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpHO3CVe 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m2.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/squeeze_amd64.tar.gz'] 0m2.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/proc'] 0m2.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/proc'] 0m2.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/pts'] 0m2.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/pts'] 0m2.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/ptmx'] 0m2.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/ptmx'] 0m2.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/console'] 0m2.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/console'] 0m2.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/shm'] 0m2.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/shm'] 0m2.3s DEBUG: sources.list: deb http://archive.debian.org/debian squeeze main 0m2.3s DEBUG: Created policy-rc.d and chmodded it. 0m2.3s DEBUG: Created resolv.conf. 0m2.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpHO3CVe/tmp/scripts/ 0m2.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts-wheezy to /srv/piuparts.debian.org/tmp/tmpHO3CVe/tmp/scripts/ 0m2.4s INFO: Running scripts post_chroot_unpack 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', 'update'] 0m4.5s DUMP: Get:1 http://archive.debian.org squeeze Release.gpg [1655 B] Ign http://archive.debian.org/debian/ squeeze/main Translation-en Get:2 http://archive.debian.org squeeze Release [96.0 kB] Get:3 http://archive.debian.org squeeze/main amd64 Packages [8370 kB] Fetched 8468 kB in 1s (6468 kB/s) Reading package lists... 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', 'update'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-yf', 'dist-upgrade'] 0m4.8s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-yf', 'dist-upgrade'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.2s DUMP: 6a0e4d3b374fdc6be02fc5f39fbf3166 - 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.2s INFO: Running scripts post_setup 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_dummy_users'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_dummy_users'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_experimental'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_experimental'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_forbid_home'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_forbid_home'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_minimize'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_minimize'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m7.6s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 320 kB of archives. After this operation, 1532 kB of additional disk space will be used. Get:1 http://archive.debian.org/debian/ squeeze/main adduser all 3.112+nmu2 [250 kB] Get:2 http://archive.debian.org/debian/ squeeze/main ucf all 3.0025+nmu1 [69.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 320 kB in 0s (4576 kB/s) Selecting previously deselected package adduser. (Reading database ... 6138 files and directories currently installed.) Unpacking adduser (from .../adduser_3.112+nmu2_all.deb) ... Selecting previously deselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu1_all.deb) ... Moving old data out of the way Setting up adduser (3.112+nmu2) ... Setting up ucf (3.0025+nmu1) ... 0m7.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m7.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_zz_backports'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_setup_zz_backports'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DUMP: install ok installed adduser 3.112+nmu2 install ok installed apt 0.8.10.3+squeeze1 install ok installed base-files 6.0squeeze10 install ok installed base-passwd 3.5.22 install ok installed bash 4.1-3 install ok installed bsdutils 1:2.17.2-9 install ok installed coreutils 8.5-1 install ok installed dash 0.5.5.1-7.4 install ok installed debconf 1.5.36.1 install ok installed debconf-i18n 1.5.36.1 install ok installed debian-archive-keyring 2010.08.28+squeeze1 install ok installed debianutils 3.4 install ok installed diffutils 1:3.0-1 install ok installed dpkg 1.15.11 install ok installed e2fslibs 1.41.12-4stable1 install ok installed e2fsprogs 1.41.12-4stable1 install ok installed findutils 4.4.2-1+b1 install ok installed gcc-4.4-base 4.4.5-8 install ok installed gnupg 1.4.10-4+squeeze4 install ok installed gpgv 1.4.10-4+squeeze4 install ok installed grep 2.6.3-3+squeeze1 install ok installed gzip 1.3.12-9+squeeze1 install ok installed hostname 3.04 install ok installed initscripts 2.88dsf-13.1+squeeze1 install ok installed insserv 1.14.0-2 install ok installed libacl1 2.2.49-4 install ok installed libattr1 1:2.4.44-2 install ok installed libblkid1 2.17.2-9 install ok installed libbz2-1.0 1.0.5-6+squeeze1 install ok installed libc-bin 2.11.3-4 install ok installed libc6 2.11.3-4 install ok installed libcomerr2 1.41.12-4stable1 install ok installed libdb4.8 4.8.30-2 install ok installed libgcc1 1:4.4.5-8 install ok installed liblocale-gettext-perl 1.05-6 install ok installed liblzma2 5.0.0-2 install ok installed libncurses5 5.7+20100313-5 install ok installed libpam-modules 1.1.1-6.1+squeeze1 install ok installed libpam-runtime 1.1.1-6.1+squeeze1 install ok installed libpam0g 1.1.1-6.1+squeeze1 install ok installed libreadline6 6.1-3 install ok installed libselinux1 2.0.96-1 install ok installed libsepol1 2.0.41-1 install ok installed libslang2 2.2.2-4 install ok installed libss2 1.41.12-4stable1 install ok installed libstdc++6 4.4.5-8 install ok installed libtext-charwidth-perl 0.04-6 install ok installed libtext-iconv-perl 1.7-2 install ok installed libtext-wrapi18n-perl 0.06-7 install ok installed libusb-0.1-4 2:0.1.12-16 install ok installed libuuid1 2.17.2-9 install ok installed login 1:4.1.4.2+svn3283-2+squeeze1 install ok installed lsb-base 3.2-23.2squeeze1 install ok installed mawk 1.3.3-15 install ok installed mount 2.17.2-9 install ok installed ncurses-base 5.7+20100313-5 install ok installed ncurses-bin 5.7+20100313-5 install ok installed passwd 1:4.1.4.2+svn3283-2+squeeze1 install ok installed perl-base 5.10.1-17squeeze6 install ok installed readline-common 6.1-3 install ok installed sed 4.2.1-7 install ok installed sensible-utils 0.0.4 install ok installed sysv-rc 2.88dsf-13.1+squeeze1 install ok installed sysvinit 2.88dsf-13.1+squeeze1 install ok installed sysvinit-utils 2.88dsf-13.1+squeeze1 install ok installed tar 1.23-3 install ok installed tzdata 2014e-0squeeze1 install ok installed ucf 3.0025+nmu1 install ok installed util-linux 2.17.2-9 install ok installed xz-utils 5.0.0-2 install ok installed zlib1g 1:1.2.3.4.dfsg-3 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DEBUG: Loading chroot meta data from reference-chroot-metadata.dat 0m8.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 0m9.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 0m9.9s INFO: Running scripts is_testable 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/is_testable_uninstallable'] 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/is_testable_uninstallable'] 0m9.9s INFO: Running scripts pre_test 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_test_exceptions'] 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_test_exceptions'] 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_test_root_password'] 0m10.0s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_test_root_password'] 0m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'show', 'libminc-dev'] 0m10.1s DUMP: Package: libminc-dev Priority: optional Section: libdevel Installed-Size: 1980 Maintainer: Debian Med Packaging Team Architecture: amd64 Source: minc Version: 2.0.18+cvs20100518-1 Replaces: libminc0-dev Depends: libminc2-1 (= 2.0.18+cvs20100518-1), libnetcdf-dev, libhdf5-openmpi-dev Conflicts: libminc0-dev Filename: pool/main/m/minc/libminc-dev_2.0.18+cvs20100518-1_amd64.deb Size: 875758 MD5sum: 4bf4ecb6af0447c2ada5197f26db573d SHA1: e9c708c2c215aa1b55e507c0d45b554225e5b0cb SHA256: 86e61134730c13de7bbf15bfb15aaee7b275092fbf40bab483fb643268f2c8cd Description: MNI medical image format development environment This package contains the library and headers for libminc2 and libvolume_io2. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Tag: field::medicine, field::medicine:imaging, implemented-in::c, qa::low-popcon, role::devel-lib 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'show', 'libminc-dev'] 0m10.1s INFO: apt-cache knows about the following packages: libminc-dev 0m10.1s INFO: Running scripts pre_install 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_database-server'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_database-server'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_exceptions'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_exceptions'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_extras'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_extras'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy'] 0m10.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://archive.debian.org/debian/ squeeze/main amd64 Packages release v=6.0.10,o=Debian,a=oldoldstable,n=squeeze,l=Debian,c=main origin archive.debian.org Pinned packages: 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy', 'libminc-dev'] 0m10.2s DUMP: libminc-dev: Installed: (none) Candidate: 2.0.18+cvs20100518-1 Version table: 2.0.18+cvs20100518-1 0 500 http://archive.debian.org/debian/ squeeze/main amd64 Packages 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy', 'libminc-dev'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-y', 'install', 'libminc-dev'] 0m18.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: ca-certificates libc-dev-bin libc6-dev libcurl3-gnutls libgcrypt11 libgfortran3 libgnutls26 libgpg-error0 libgssapi-krb5-2 libhdf5-openmpi-1.8.4 libhdf5-openmpi-dev libibverbs-dev libibverbs1 libidn11 libjpeg62 libjpeg62-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libminc2-1 libnetcdf-dev libnetcdf6 libnuma1 libopenmpi-dev libopenmpi1.3 libsasl2-2 libssl0.9.8 libtasn1-3 libtorque2 linux-libc-dev openmpi-common openssl zlib1g-dev Suggested packages: glibc-doc rng-tools gnutls-bin krb5-doc krb5-user libhdf5-doc netcdf-bin netcdf-doc Recommended packages: manpages-dev gcc c-compiler pkg-config libsasl2-modules The following NEW packages will be installed: ca-certificates libc-dev-bin libc6-dev libcurl3-gnutls libgcrypt11 libgfortran3 libgnutls26 libgpg-error0 libgssapi-krb5-2 libhdf5-openmpi-1.8.4 libhdf5-openmpi-dev libibverbs-dev libibverbs1 libidn11 libjpeg62 libjpeg62-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libminc-dev libminc2-1 libnetcdf-dev libnetcdf6 libnuma1 libopenmpi-dev libopenmpi1.3 libsasl2-2 libssl0.9.8 libtasn1-3 libtorque2 linux-libc-dev openmpi-common openssl zlib1g-dev 0 upgraded, 36 newly installed, 0 to remove and 0 not upgraded. Need to get 19.4 MB of archives. After this operation, 78.3 MB of additional disk space will be used. Get:1 http://archive.debian.org/debian/ squeeze/main libssl0.9.8 amd64 0.9.8o-4squeeze14 [1002 kB] Get:2 http://archive.debian.org/debian/ squeeze/main libgpg-error0 amd64 1.6-1 [43.9 kB] Get:3 http://archive.debian.org/debian/ squeeze/main libgcrypt11 amd64 1.4.5-2+squeeze1 [282 kB] Get:4 http://archive.debian.org/debian/ squeeze/main libtasn1-3 amd64 2.7-1+squeeze+1 [63.1 kB] Get:5 http://archive.debian.org/debian/ squeeze/main libgnutls26 amd64 2.8.6-1+squeeze3 [564 kB] Get:6 http://archive.debian.org/debian/ squeeze/main libkeyutils1 amd64 1.4-1 [6942 B] Get:7 http://archive.debian.org/debian/ squeeze/main libkrb5support0 amd64 1.8.3+dfsg-4squeeze7 [46.5 kB] Get:8 http://archive.debian.org/debian/ squeeze/main libk5crypto3 amd64 1.8.3+dfsg-4squeeze7 [106 kB] Get:9 http://archive.debian.org/debian/ squeeze/main libkrb5-3 amd64 1.8.3+dfsg-4squeeze7 [374 kB] Get:10 http://archive.debian.org/debian/ squeeze/main libgssapi-krb5-2 amd64 1.8.3+dfsg-4squeeze7 [131 kB] Get:11 http://archive.debian.org/debian/ squeeze/main libidn11 amd64 1.15-2 [158 kB] Get:12 http://archive.debian.org/debian/ squeeze/main libsasl2-2 amd64 2.1.23.dfsg1-7 [115 kB] Get:13 http://archive.debian.org/debian/ squeeze/main libldap-2.4-2 amd64 2.4.23-7.3 [211 kB] Get:14 http://archive.debian.org/debian/ squeeze/main openssl amd64 0.9.8o-4squeeze14 [1060 kB] Get:15 http://archive.debian.org/debian/ squeeze/main ca-certificates all 20090814+nmu3squeeze1 [146 kB] Get:16 http://archive.debian.org/debian/ squeeze/main libc-dev-bin amd64 2.11.3-4 [210 kB] Get:17 http://archive.debian.org/debian/ squeeze/main linux-libc-dev amd64 2.6.32-48squeeze6 [857 kB] Get:18 http://archive.debian.org/debian/ squeeze/main libc6-dev amd64 2.11.3-4 [2593 kB] Get:19 http://archive.debian.org/debian/ squeeze/main libcurl3-gnutls amd64 7.21.0-2.1+squeeze8 [266 kB] Get:20 http://archive.debian.org/debian/ squeeze/main libgfortran3 amd64 4.4.5-8 [291 kB] Get:21 http://archive.debian.org/debian/ squeeze/main libjpeg62 amd64 6b1-1 [94.0 kB] Get:22 http://archive.debian.org/debian/ squeeze/main libjpeg62-dev amd64 6b1-1 [201 kB] Get:23 http://archive.debian.org/debian/ squeeze/main libibverbs1 amd64 1.1.3-2 [33.7 kB] Get:24 http://archive.debian.org/debian/ squeeze/main libnuma1 amd64 2.0.5-1 [26.7 kB] Get:25 http://archive.debian.org/debian/ squeeze/main libtorque2 amd64 2.4.8+dfsg-9squeeze4 [115 kB] Get:26 http://archive.debian.org/debian/ squeeze/main libopenmpi1.3 amd64 1.4.2-4 [1400 kB] Get:27 http://archive.debian.org/debian/ squeeze/main libhdf5-openmpi-1.8.4 amd64 1.8.4-patch1-2 [1357 kB] Get:28 http://archive.debian.org/debian/ squeeze/main libnetcdf6 amd64 1:4.1.1-5 [520 kB] Get:29 http://archive.debian.org/debian/ squeeze/main libminc2-1 amd64 2.0.18+cvs20100518-1 [261 kB] Get:30 http://archive.debian.org/debian/ squeeze/main libnetcdf-dev amd64 1:4.1.1-5 [660 kB] Get:31 http://archive.debian.org/debian/ squeeze/main zlib1g-dev amd64 1:1.2.3.4.dfsg-3 [192 kB] Get:32 http://archive.debian.org/debian/ squeeze/main openmpi-common all 1.4.2-4 [89.5 kB] Get:33 http://archive.debian.org/debian/ squeeze/main libibverbs-dev amd64 1.1.3-2 [83.3 kB] Get:34 http://archive.debian.org/debian/ squeeze/main libopenmpi-dev amd64 1.4.2-4 [2726 kB] Get:35 http://archive.debian.org/debian/ squeeze/main libhdf5-openmpi-dev amd64 1.8.4-patch1-2 [2190 kB] Get:36 http://archive.debian.org/debian/ squeeze/main libminc-dev amd64 2.0.18+cvs20100518-1 [876 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 19.4 MB in 1s (14.9 MB/s) Selecting previously deselected package libssl0.9.8. (Reading database ... 6261 files and directories currently installed.) Unpacking libssl0.9.8 (from .../libssl0.9.8_0.9.8o-4squeeze14_amd64.deb) ... Selecting previously deselected package libgpg-error0. Unpacking libgpg-error0 (from .../libgpg-error0_1.6-1_amd64.deb) ... Selecting previously deselected package libgcrypt11. Unpacking libgcrypt11 (from .../libgcrypt11_1.4.5-2+squeeze1_amd64.deb) ... Selecting previously deselected package libtasn1-3. Unpacking libtasn1-3 (from .../libtasn1-3_2.7-1+squeeze+1_amd64.deb) ... Selecting previously deselected package libgnutls26. Unpacking libgnutls26 (from .../libgnutls26_2.8.6-1+squeeze3_amd64.deb) ... Selecting previously deselected package libkeyutils1. Unpacking libkeyutils1 (from .../libkeyutils1_1.4-1_amd64.deb) ... Selecting previously deselected package libkrb5support0. Unpacking libkrb5support0 (from .../libkrb5support0_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libk5crypto3. Unpacking libk5crypto3 (from .../libk5crypto3_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libkrb5-3. Unpacking libkrb5-3 (from .../libkrb5-3_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libgssapi-krb5-2. Unpacking libgssapi-krb5-2 (from .../libgssapi-krb5-2_1.8.3+dfsg-4squeeze7_amd64.deb) ... Selecting previously deselected package libidn11. Unpacking libidn11 (from .../libidn11_1.15-2_amd64.deb) ... Selecting previously deselected package libsasl2-2. Unpacking libsasl2-2 (from .../libsasl2-2_2.1.23.dfsg1-7_amd64.deb) ... Selecting previously deselected package libldap-2.4-2. Unpacking libldap-2.4-2 (from .../libldap-2.4-2_2.4.23-7.3_amd64.deb) ... Selecting previously deselected package openssl. Unpacking openssl (from .../openssl_0.9.8o-4squeeze14_amd64.deb) ... Selecting previously deselected package ca-certificates. Unpacking ca-certificates (from .../ca-certificates_20090814+nmu3squeeze1_all.deb) ... Selecting previously deselected package libc-dev-bin. Unpacking libc-dev-bin (from .../libc-dev-bin_2.11.3-4_amd64.deb) ... Selecting previously deselected package linux-libc-dev. Unpacking linux-libc-dev (from .../linux-libc-dev_2.6.32-48squeeze6_amd64.deb) ... Selecting previously deselected package libc6-dev. Unpacking libc6-dev (from .../libc6-dev_2.11.3-4_amd64.deb) ... Selecting previously deselected package libcurl3-gnutls. Unpacking libcurl3-gnutls (from .../libcurl3-gnutls_7.21.0-2.1+squeeze8_amd64.deb) ... Selecting previously deselected package libgfortran3. Unpacking libgfortran3 (from .../libgfortran3_4.4.5-8_amd64.deb) ... Selecting previously deselected package libjpeg62. Unpacking libjpeg62 (from .../libjpeg62_6b1-1_amd64.deb) ... Selecting previously deselected package libjpeg62-dev. Unpacking libjpeg62-dev (from .../libjpeg62-dev_6b1-1_amd64.deb) ... Selecting previously deselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.3-2_amd64.deb) ... Selecting previously deselected package libnuma1. Unpacking libnuma1 (from .../libnuma1_2.0.5-1_amd64.deb) ... Selecting previously deselected package libtorque2. Unpacking libtorque2 (from .../libtorque2_2.4.8+dfsg-9squeeze4_amd64.deb) ... Selecting previously deselected package libopenmpi1.3. Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.2-4_amd64.deb) ... Selecting previously deselected package libhdf5-openmpi-1.8.4. Unpacking libhdf5-openmpi-1.8.4 (from .../libhdf5-openmpi-1.8.4_1.8.4-patch1-2_amd64.deb) ... Selecting previously deselected package libnetcdf6. Unpacking libnetcdf6 (from .../libnetcdf6_1%3a4.1.1-5_amd64.deb) ... Selecting previously deselected package libminc2-1. Unpacking libminc2-1 (from .../libminc2-1_2.0.18+cvs20100518-1_amd64.deb) ... Selecting previously deselected package libnetcdf-dev. Unpacking libnetcdf-dev (from .../libnetcdf-dev_1%3a4.1.1-5_amd64.deb) ... Selecting previously deselected package zlib1g-dev. Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_amd64.deb) ... Selecting previously deselected package openmpi-common. Unpacking openmpi-common (from .../openmpi-common_1.4.2-4_all.deb) ... Selecting previously deselected package libibverbs-dev. Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.3-2_amd64.deb) ... Selecting previously deselected package libopenmpi-dev. Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.4.2-4_amd64.deb) ... Selecting previously deselected package libhdf5-openmpi-dev. Unpacking libhdf5-openmpi-dev (from .../libhdf5-openmpi-dev_1.8.4-patch1-2_amd64.deb) ... Selecting previously deselected package libminc-dev. Unpacking libminc-dev (from .../libminc-dev_2.0.18+cvs20100518-1_amd64.deb) ... Setting up libssl0.9.8 (0.9.8o-4squeeze14) ... Setting up libgpg-error0 (1.6-1) ... Setting up libgcrypt11 (1.4.5-2+squeeze1) ... Setting up libtasn1-3 (2.7-1+squeeze+1) ... Setting up libgnutls26 (2.8.6-1+squeeze3) ... Setting up libkeyutils1 (1.4-1) ... Setting up libkrb5support0 (1.8.3+dfsg-4squeeze7) ... Setting up libk5crypto3 (1.8.3+dfsg-4squeeze7) ... Setting up libkrb5-3 (1.8.3+dfsg-4squeeze7) ... Setting up libgssapi-krb5-2 (1.8.3+dfsg-4squeeze7) ... Setting up libidn11 (1.15-2) ... Setting up libsasl2-2 (2.1.23.dfsg1-7) ... Setting up libldap-2.4-2 (2.4.23-7.3) ... Setting up openssl (0.9.8o-4squeeze14) ... Setting up ca-certificates (20090814+nmu3squeeze1) ... Updating certificates in /etc/ssl/certs... WARNING: Skipping duplicate certificate brasil.gov.br.pem 140 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d....done. Setting up libc-dev-bin (2.11.3-4) ... Setting up linux-libc-dev (2.6.32-48squeeze6) ... Setting up libc6-dev (2.11.3-4) ... Setting up libcurl3-gnutls (7.21.0-2.1+squeeze8) ... Setting up libgfortran3 (4.4.5-8) ... Setting up libjpeg62 (6b1-1) ... Setting up libjpeg62-dev (6b1-1) ... Setting up libibverbs1 (1.1.3-2) ... Setting up libnuma1 (2.0.5-1) ... Setting up libtorque2 (2.4.8+dfsg-9squeeze4) ... Setting up libopenmpi1.3 (1.4.2-4) ... Setting up libhdf5-openmpi-1.8.4 (1.8.4-patch1-2) ... Setting up libnetcdf6 (1:4.1.1-5) ... Setting up libminc2-1 (2.0.18+cvs20100518-1) ... Setting up libnetcdf-dev (1:4.1.1-5) ... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ... Setting up openmpi-common (1.4.2-4) ... Setting up libibverbs-dev (1.1.3-2) ... Setting up libopenmpi-dev (1.4.2-4) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode. Setting up libhdf5-openmpi-dev (1.8.4-patch1-2) ... Setting up libminc-dev (2.0.18+cvs20100518-1) ... 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-y', 'install', 'libminc-dev'] 0m18.5s INFO: Running scripts post_install 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_install_exceptions'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_install_exceptions'] 0m18.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 0m20.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 0m20.1s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpHO3CVe to wheezy-lts 0m20.1s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ wheezy main deb http://security.debian.org wheezy/updates main 0m20.1s INFO: Running scripts pre_distupgrade 0m20.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_exceptions'] 0m20.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_exceptions'] 0m20.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_wheezy'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_wheezy'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', 'update'] 0m23.9s DUMP: Get:1 http://security.debian.org wheezy/updates Release.gpg [1601 B] Ign http://security.debian.org/ wheezy/updates/main Translation-en Get:2 http://security.debian.org wheezy/updates Release [39.0 kB] Get:3 http://security.debian.org wheezy/updates/main amd64 Packages [764 kB] Get:4 http://mirror.bm.debian.org wheezy Release.gpg [2373 B] Ign http://mirror.bm.debian.org/debian/ wheezy/main Translation-en Get:5 http://mirror.bm.debian.org wheezy Release [191 kB] Get:6 http://mirror.bm.debian.org wheezy/main amd64 Packages [7634 kB] Fetched 8632 kB in 2s (3455 kB/s) Reading package lists... W: There is no public key available for the following key IDs: 9D6D8F6BC857C906 W: There is no public key available for the following key IDs: 7638D0442B90D010 0m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', 'update'] 0m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-yf', 'dist-upgrade'] 1m19.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libhdf5-openmpi-1.8.4 libhdf5-openmpi-dev libminc-dev libnetcdf6 The following NEW packages will be installed: gcc-4.7-base hdf5-helpers libapt-pkg4.12 libcf0 libdb5.1 libhdf5-openmpi-7 libjpeg8 liblzma5 libmount1 libnetcdfc++4 libnetcdfc7 libnetcdff5 libp11-kit0 libpam-modules-bin libquadmath0 librtmp0 libsemanage-common libsemanage1 libssh2-1 libssl1.0.0 libtinfo5 libustr-1.0-1 multiarch-support The following packages will be upgraded: adduser apt base-files base-passwd bash bsdutils ca-certificates coreutils dash debconf debconf-i18n debian-archive-keyring debianutils diffutils dpkg e2fslibs e2fsprogs findutils gcc-4.4-base gnupg gpgv grep gzip hostname initscripts insserv libacl1 libattr1 libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcomerr2 libcurl3-gnutls libgcc1 libgcrypt11 libgfortran3 libgnutls26 libgpg-error0 libgssapi-krb5-2 libibverbs-dev libibverbs1 libidn11 libjpeg62 libjpeg62-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 liblocale-gettext-perl libminc2-1 libncurses5 libnetcdf-dev libnuma1 libopenmpi-dev libopenmpi1.3 libpam-modules libpam-runtime libpam0g libreadline6 libsasl2-2 libselinux1 libsepol1 libslang2 libss2 libstdc++6 libtasn1-3 libtext-charwidth-perl libtext-iconv-perl libtorque2 libusb-0.1-4 libuuid1 linux-libc-dev login lsb-base mawk mount ncurses-base ncurses-bin openmpi-common openssl passwd perl-base readline-common sed sensible-utils sysv-rc sysvinit sysvinit-utils tar tzdata ucf util-linux xz-utils zlib1g zlib1g-dev 99 upgraded, 23 newly installed, 4 to remove and 0 not upgraded. Need to get 53.8 MB of archives. After this operation, 22.5 MB disk space will be freed. Get:1 http://security.debian.org/ wheezy/updates/main libc6-dev amd64 2.13-38+deb7u12 [2663 kB] Get:2 http://security.debian.org/ wheezy/updates/main libc-dev-bin amd64 2.13-38+deb7u12 [228 kB] Get:3 http://security.debian.org/ wheezy/updates/main libc-bin amd64 2.13-38+deb7u12 [1275 kB] Get:4 http://security.debian.org/ wheezy/updates/main libc6 amd64 2.13-38+deb7u12 [4226 kB] Get:5 http://security.debian.org/ wheezy/updates/main multiarch-support amd64 2.13-38+deb7u12 [152 kB] Get:6 http://security.debian.org/ wheezy/updates/main perl-base amd64 5.14.2-21+deb7u5 [1534 kB] Get:7 http://mirror.bm.debian.org/debian/ wheezy/main gcc-4.7-base amd64 4.7.2-5 [144 kB] Get:8 http://security.debian.org/ wheezy/updates/main libdb5.1 amd64 5.1.29-5+deb7u1 [723 kB] Get:9 http://security.debian.org/ wheezy/updates/main sensible-utils all 0.0.7+deb7u1 [9000 B] Get:10 http://security.debian.org/ wheezy/updates/main passwd amd64 1:4.1.5.1-1+deb7u1 [1262 kB] Get:11 http://security.debian.org/ wheezy/updates/main libhdf5-openmpi-7 amd64 1.8.8-9+deb7u1 [1463 kB] Get:12 http://mirror.bm.debian.org/debian/ wheezy/main libgcc1 amd64 1:4.7.2-5 [43.1 kB] Get:13 http://security.debian.org/ wheezy/updates/main libtasn1-3 amd64 2.13-2+deb7u5 [68.9 kB] Get:14 http://security.debian.org/ wheezy/updates/main libgcrypt11 amd64 1.5.0-5+deb7u6 [301 kB] Get:15 http://security.debian.org/ wheezy/updates/main libgssapi-krb5-2 amd64 1.10.1+dfsg-5+deb7u9 [150 kB] Get:16 http://mirror.bm.debian.org/debian/ wheezy/main libquadmath0 amd64 4.7.2-5 [125 kB] Get:17 http://mirror.bm.debian.org/debian/ wheezy/main libgfortran3 amd64 4.7.2-5 [351 kB] Get:18 http://mirror.bm.debian.org/debian/ wheezy/main libopenmpi-dev amd64 1.4.5-1 [2778 kB] Get:19 http://security.debian.org/ wheezy/updates/main linux-libc-dev amd64 3.2.96-3 [879 kB] Get:20 http://mirror.bm.debian.org/debian/ wheezy/main openmpi-common all 1.4.5-1 [101 kB] Get:21 http://mirror.bm.debian.org/debian/ wheezy/main libtext-charwidth-perl amd64 0.04-7+b1 [11.2 kB] Get:22 http://mirror.bm.debian.org/debian/ wheezy/main libtext-iconv-perl amd64 1.7-5 [17.6 kB] Get:23 http://mirror.bm.debian.org/debian/ wheezy/main liblocale-gettext-perl amd64 1.05-7+b1 [20.4 kB] Get:24 http://mirror.bm.debian.org/debian/ wheezy/main libsemanage-common all 2.1.6-6 [23.2 kB] Get:25 http://mirror.bm.debian.org/debian/ wheezy/main libsepol1 amd64 2.1.4-3 [135 kB] Get:26 http://security.debian.org/ wheezy/updates/main libk5crypto3 amd64 1.10.1+dfsg-5+deb7u9 [114 kB] Get:27 http://mirror.bm.debian.org/debian/ wheezy/main libustr-1.0-1 amd64 1.0.4-3 [92.5 kB] Get:28 http://mirror.bm.debian.org/debian/ wheezy/main libbz2-1.0 amd64 1.0.6-4 [46.5 kB] Get:29 http://mirror.bm.debian.org/debian/ wheezy/main libselinux1 amd64 2.1.9-5 [90.6 kB] Get:30 http://security.debian.org/ wheezy/updates/main libkrb5-3 amd64 1.10.1+dfsg-5+deb7u9 [394 kB] Get:31 http://mirror.bm.debian.org/debian/ wheezy/main libsemanage1 amd64 2.1.6-6 [102 kB] Get:32 http://security.debian.org/ wheezy/updates/main libkrb5support0 amd64 1.10.1+dfsg-5+deb7u9 [50.7 kB] Get:33 http://security.debian.org/ wheezy/updates/main libidn11 amd64 1.25-2+deb7u3 [180 kB] Get:34 http://security.debian.org/ wheezy/updates/main libldap-2.4-2 amd64 2.4.31-2+deb7u3 [244 kB] Get:35 http://security.debian.org/ wheezy/updates/main librtmp0 amd64 2.4+20111222.git4e06e21-1+deb7u1 [62.5 kB] Get:36 http://security.debian.org/ wheezy/updates/main libcurl3-gnutls amd64 7.26.0-1+wheezy24 [326 kB] Get:37 http://security.debian.org/ wheezy/updates/main tzdata all 2017c-0+deb7u1 [493 kB] Get:38 http://security.debian.org/ wheezy/updates/main bash amd64 4.2+dfsg-0.1+deb7u4 [1499 kB] Get:39 http://mirror.bm.debian.org/debian/ wheezy/main debconf all 1.5.49 [171 kB] Get:40 http://security.debian.org/ wheezy/updates/main login amd64 1:4.1.5.1-1+deb7u1 [984 kB] Get:41 http://security.debian.org/ wheezy/updates/main tar amd64 1.26+dfsg-0.1+deb7u1 [984 kB] Get:42 http://security.debian.org/ wheezy/updates/main gpgv amd64 1.4.12-7+deb7u9 [229 kB] Get:43 http://security.debian.org/ wheezy/updates/main gnupg amd64 1.4.12-7+deb7u9 [1954 kB] Get:44 http://security.debian.org/ wheezy/updates/main libssl1.0.0 amd64 1.0.1t-1+deb7u3 [1281 kB] Get:45 http://security.debian.org/ wheezy/updates/main openssl amd64 1.0.1t-1+deb7u3 [700 kB] Get:46 http://security.debian.org/ wheezy/updates/main ca-certificates all 20130119+deb7u2 [210 kB] Get:47 http://security.debian.org/ wheezy/updates/main hdf5-helpers amd64 1.8.8-9+deb7u1 [32.9 kB] Get:48 http://mirror.bm.debian.org/debian/ wheezy/main libpam0g amd64 1.1.3-7.1 [128 kB] Get:49 http://mirror.bm.debian.org/debian/ wheezy/main libpam-modules-bin amd64 1.1.3-7.1 [113 kB] Get:50 http://mirror.bm.debian.org/debian/ wheezy/main libpam-modules amd64 1.1.3-7.1 [348 kB] Get:51 http://mirror.bm.debian.org/debian/ wheezy/main debianutils amd64 4.3.2 [78.9 kB] Get:52 http://mirror.bm.debian.org/debian/ wheezy/main adduser all 3.113+nmu3 [264 kB] Get:53 http://mirror.bm.debian.org/debian/ wheezy/main libibverbs-dev amd64 1.1.6-1 [84.8 kB] Get:54 http://mirror.bm.debian.org/debian/ wheezy/main libibverbs1 amd64 1.1.6-1 [35.3 kB] Get:55 http://mirror.bm.debian.org/debian/ wheezy/main libnuma1 amd64 2.0.8~rc4-1 [33.7 kB] Get:56 http://mirror.bm.debian.org/debian/ wheezy/main libstdc++6 amd64 4.7.2-5 [332 kB] Get:57 http://mirror.bm.debian.org/debian/ wheezy/main libtorque2 amd64 2.4.16+dfsg-1+deb7u4 [121 kB] Get:58 http://mirror.bm.debian.org/debian/ wheezy/main libopenmpi1.3 amd64 1.4.5-1 [1436 kB] Get:59 http://mirror.bm.debian.org/debian/ wheezy/main zlib1g-dev amd64 1:1.2.7.dfsg-13 [215 kB] Get:60 http://mirror.bm.debian.org/debian/ wheezy/main zlib1g amd64 1:1.2.7.dfsg-13 [87.4 kB] Get:61 http://mirror.bm.debian.org/debian/ wheezy/main libminc2-1 amd64 2.1.10-1+b1 [265 kB] Get:62 http://mirror.bm.debian.org/debian/ wheezy/main libnetcdf-dev amd64 1:4.1.3-6+b1 [655 kB] Get:63 http://mirror.bm.debian.org/debian/ wheezy/main libp11-kit0 amd64 0.12-3 [52.8 kB] Get:64 http://mirror.bm.debian.org/debian/ wheezy/main libgnutls26 amd64 2.12.20-8+deb7u5 [620 kB] Get:65 http://mirror.bm.debian.org/debian/ wheezy/main libgpg-error0 amd64 1.10-3.1 [77.9 kB] Get:66 http://mirror.bm.debian.org/debian/ wheezy/main libkeyutils1 amd64 1.5.5-3+deb7u1 [8664 B] Get:67 http://mirror.bm.debian.org/debian/ wheezy/main libcomerr2 amd64 1.42.5-1.1+deb7u1 [56.1 kB] Get:68 http://mirror.bm.debian.org/debian/ wheezy/main libsasl2-2 amd64 2.1.25.dfsg1-6+deb7u1 [120 kB] Get:69 http://mirror.bm.debian.org/debian/ wheezy/main libssh2-1 amd64 1.4.2-1.1+deb7u2 [134 kB] Get:70 http://mirror.bm.debian.org/debian/ wheezy/main libnetcdff5 amd64 1:4.1.3-6+b1 [142 kB] Get:71 http://mirror.bm.debian.org/debian/ wheezy/main libnetcdfc++4 amd64 1:4.1.3-6+b1 [64.6 kB] Get:72 http://mirror.bm.debian.org/debian/ wheezy/main libcf0 amd64 1:4.1.3-6+b1 [49.9 kB] Get:73 http://mirror.bm.debian.org/debian/ wheezy/main libnetcdfc7 amd64 1:4.1.3-6+b1 [356 kB] Get:74 http://mirror.bm.debian.org/debian/ wheezy/main libuuid1 amd64 2.20.1-5.3 [57.1 kB] Get:75 http://mirror.bm.debian.org/debian/ wheezy/main libblkid1 amd64 2.20.1-5.3 [120 kB] Get:76 http://mirror.bm.debian.org/debian/ wheezy/main libslang2 amd64 2.2.4-15 [551 kB] Get:77 http://mirror.bm.debian.org/debian/ wheezy/main libtinfo5 amd64 5.9-10 [275 kB] Get:78 http://mirror.bm.debian.org/debian/ wheezy/main lsb-base all 4.1+Debian8+deb7u1 [26.8 kB] Get:79 http://mirror.bm.debian.org/debian/ wheezy/main liblzma5 amd64 5.1.1alpha+20120614-2 [202 kB] Get:80 http://mirror.bm.debian.org/debian/ wheezy/main dpkg amd64 1.16.18 [2665 kB] Get:81 http://mirror.bm.debian.org/debian/ wheezy/main util-linux amd64 2.20.1-5.3 [659 kB] Get:82 http://mirror.bm.debian.org/debian/ wheezy/main insserv amd64 1.14.0-5 [64.8 kB] Get:83 http://mirror.bm.debian.org/debian/ wheezy/main sysvinit-utils amd64 2.88dsf-41+deb7u1 [100 kB] Get:84 http://mirror.bm.debian.org/debian/ wheezy/main sysv-rc all 2.88dsf-41+deb7u1 [81.8 kB] Get:85 http://mirror.bm.debian.org/debian/ wheezy/main libmount1 amd64 2.20.1-5.3 [120 kB] Get:86 http://mirror.bm.debian.org/debian/ wheezy/main mount amd64 2.20.1-5.3 [213 kB] Get:87 http://mirror.bm.debian.org/debian/ wheezy/main libattr1 amd64 1:2.4.46-8 [19.8 kB] Get:88 http://mirror.bm.debian.org/debian/ wheezy/main libacl1 amd64 2.2.51-8 [30.1 kB] Get:89 http://mirror.bm.debian.org/debian/ wheezy/main coreutils amd64 8.13-3.5 [5628 kB] Get:90 http://mirror.bm.debian.org/debian/ wheezy/main initscripts amd64 2.88dsf-41+deb7u1 [91.8 kB] Get:91 http://mirror.bm.debian.org/debian/ wheezy/main base-files amd64 7.1wheezy11 [67.1 kB] Get:92 http://mirror.bm.debian.org/debian/ wheezy/main dash amd64 0.5.7-3 [113 kB] Get:93 http://mirror.bm.debian.org/debian/ wheezy/main diffutils amd64 1:3.2-6 [366 kB] Get:94 http://mirror.bm.debian.org/debian/ wheezy/main e2fslibs amd64 1.42.5-1.1+deb7u1 [197 kB] Get:95 http://mirror.bm.debian.org/debian/ wheezy/main e2fsprogs amd64 1.42.5-1.1+deb7u1 [979 kB] Get:96 http://mirror.bm.debian.org/debian/ wheezy/main findutils amd64 4.4.2-4 [694 kB] Get:97 http://mirror.bm.debian.org/debian/ wheezy/main grep amd64 2.12-2 [454 kB] Get:98 http://mirror.bm.debian.org/debian/ wheezy/main gzip amd64 1.5-1.1 [119 kB] Get:99 http://mirror.bm.debian.org/debian/ wheezy/main hostname amd64 3.11 [15.0 kB] Get:100 http://mirror.bm.debian.org/debian/ wheezy/main ncurses-bin amd64 5.9-10 [335 kB] Get:101 http://mirror.bm.debian.org/debian/ wheezy/main sed amd64 4.2.1-10 [251 kB] Get:102 http://mirror.bm.debian.org/debian/ wheezy/main sysvinit amd64 2.88dsf-41+deb7u1 [133 kB] Get:103 http://mirror.bm.debian.org/debian/ wheezy/main base-passwd amd64 3.5.26 [46.3 kB] Get:104 http://mirror.bm.debian.org/debian/ wheezy/main bsdutils amd64 1:2.20.1-5.3 [85.5 kB] Get:105 http://mirror.bm.debian.org/debian/ wheezy/main ncurses-base all 5.9-10 [198 kB] Get:106 http://mirror.bm.debian.org/debian/ wheezy/main debian-archive-keyring all 2014.3~deb7u1 [60.7 kB] Get:107 http://mirror.bm.debian.org/debian/ wheezy/main readline-common all 6.2+dfsg-0.1 [31.9 kB] Get:108 http://mirror.bm.debian.org/debian/ wheezy/main libreadline6 amd64 6.2+dfsg-0.1 [166 kB] Get:109 http://mirror.bm.debian.org/debian/ wheezy/main libusb-0.1-4 amd64 2:0.1.12-20+nmu1 [23.1 kB] Get:110 http://mirror.bm.debian.org/debian/ wheezy/main libapt-pkg4.12 amd64 0.9.7.9+deb7u7 [891 kB] Get:111 http://mirror.bm.debian.org/debian/ wheezy/main apt amd64 0.9.7.9+deb7u7 [1262 kB] Get:112 http://mirror.bm.debian.org/debian/ wheezy/main libncurses5 amd64 5.9-10 [113 kB] Get:113 http://mirror.bm.debian.org/debian/ wheezy/main libss2 amd64 1.42.5-1.1+deb7u1 [61.4 kB] Get:114 http://mirror.bm.debian.org/debian/ wheezy/main mawk amd64 1.3.3-17 [90.8 kB] Get:115 http://mirror.bm.debian.org/debian/ wheezy/main libjpeg62-dev amd64 6b1-3+deb7u1 [202 kB] Get:116 http://mirror.bm.debian.org/debian/ wheezy/main libjpeg62 amd64 6b1-3+deb7u1 [96.9 kB] Get:117 http://mirror.bm.debian.org/debian/ wheezy/main libjpeg8 amd64 8d-1+deb7u1 [138 kB] Get:118 http://mirror.bm.debian.org/debian/ wheezy/main libpam-runtime all 1.1.3-7.1 [228 kB] Get:119 http://mirror.bm.debian.org/debian/ wheezy/main xz-utils amd64 5.1.1alpha+20120614-2 [237 kB] Get:120 http://mirror.bm.debian.org/debian/ wheezy/main debconf-i18n all 1.5.49 [237 kB] Get:121 http://mirror.bm.debian.org/debian/ wheezy/main ucf all 3.0025+nmu3 [70.8 kB] Get:122 http://mirror.bm.debian.org/debian/ wheezy/main gcc-4.4-base amd64 4.4.7-2 [127 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 53.8 MB in 10s (5075 kB/s) (Reading database ... 9184 files and directories currently installed.) Preparing to replace libc6-dev 2.11.3-4 (using .../libc6-dev_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-dev-bin 2.11.3-4 (using .../libc-dev-bin_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libc-bin 2.11.3-4 (using .../libc-bin_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-38+deb7u12) ... Installing new version of config file /etc/bindresvport.blacklist ... (Reading database ... 9204 files and directories currently installed.) Preparing to replace libc6 2.11.3-4 (using .../libc6_2.13-38+deb7u12_amd64.deb) ... Checking for services that may need to be restarted... Checking init scripts... Unpacking replacement libc6 ... Setting up libc6 (2.13-38+deb7u12) ... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. (Reading database ... 9208 files and directories currently installed.) 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Removing libhdf5-openmpi-1.8.4 ... Selecting previously deselected package libhdf5-openmpi-7. (Reading database ... 9639 files and directories currently installed.) Unpacking libhdf5-openmpi-7 (from .../libhdf5-openmpi-7_1.8.8-9+deb7u1_amd64.deb) ... Selecting previously deselected package libp11-kit0. Unpacking libp11-kit0 (from .../libp11-kit0_0.12-3_amd64.deb) ... Preparing to replace libtasn1-3 2.7-1+squeeze+1 (using .../libtasn1-3_2.13-2+deb7u5_amd64.deb) ... Unpacking replacement libtasn1-3 ... Preparing to replace libgnutls26 2.8.6-1+squeeze3 (using .../libgnutls26_2.12.20-8+deb7u5_amd64.deb) ... Unpacking replacement libgnutls26 ... Preparing to replace libgpg-error0 1.6-1 (using .../libgpg-error0_1.10-3.1_amd64.deb) ... Unpacking replacement libgpg-error0 ... Preparing to replace libgcrypt11 1.4.5-2+squeeze1 (using .../libgcrypt11_1.5.0-5+deb7u6_amd64.deb) ... Unpacking replacement libgcrypt11 ... 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Unpacking replacement libkrb5support0 ... Preparing to replace libidn11 1.15-2 (using .../libidn11_1.25-2+deb7u3_amd64.deb) ... Unpacking replacement libidn11 ... Preparing to replace libsasl2-2 2.1.23.dfsg1-7 (using .../libsasl2-2_2.1.25.dfsg1-6+deb7u1_amd64.deb) ... Unpacking replacement libsasl2-2 ... Preparing to replace libldap-2.4-2 2.4.23-7.3 (using .../libldap-2.4-2_2.4.31-2+deb7u3_amd64.deb) ... Unpacking replacement libldap-2.4-2 ... Selecting previously deselected package librtmp0. Unpacking librtmp0 (from .../librtmp0_2.4+20111222.git4e06e21-1+deb7u1_amd64.deb) ... Selecting previously deselected package libssh2-1. Unpacking libssh2-1 (from .../libssh2-1_1.4.2-1.1+deb7u2_amd64.deb) ... Preparing to replace libcurl3-gnutls 7.21.0-2.1+squeeze8 (using .../libcurl3-gnutls_7.26.0-1+wheezy24_amd64.deb) ... Unpacking replacement libcurl3-gnutls ... Selecting previously deselected package libnetcdff5. Unpacking libnetcdff5 (from .../libnetcdff5_1%3a4.1.3-6+b1_amd64.deb) ... 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(Reading database ... 9757 files and directories currently installed.) Unpacking liblzma5 (from .../liblzma5_5.1.1alpha+20120614-2_amd64.deb) ... Setting up liblzma5 (5.1.1alpha+20120614-2) ... (Reading database ... 9766 files and directories currently installed.) Preparing to replace dpkg 1.15.11 (using .../dpkg_1.16.18_amd64.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.16.18) ... (Reading database ... 9787 files and directories currently installed.) Preparing to replace util-linux 2.17.2-9 (using .../util-linux_2.20.1-5.3_amd64.deb) ... Removing obsolete conffile /etc/init.d/hwclockfirst.sh ... Unpacking replacement util-linux ... Setting up util-linux (2.20.1-5.3) ... Installing new version of config file /etc/init.d/hwclock.sh ... (Reading database ... 9782 files and directories currently installed.) Preparing to replace insserv 1.14.0-2 (using .../insserv_1.14.0-5_amd64.deb) ... Unpacking replacement insserv ... Setting up insserv (1.14.0-5) ... Installing new version of config file /etc/insserv.conf ... (Reading database ... 9772 files and directories currently installed.) Preparing to replace sysvinit-utils 2.88dsf-13.1+squeeze1 (using .../sysvinit-utils_2.88dsf-41+deb7u1_amd64.deb) ... Unpacking replacement sysvinit-utils ... Setting up sysvinit-utils (2.88dsf-41+deb7u1) ... (Reading database ... 9774 files and directories currently installed.) Preparing to replace sysv-rc 2.88dsf-13.1+squeeze1 (using .../sysv-rc_2.88dsf-41+deb7u1_all.deb) ... Unpacking replacement sysv-rc ... Setting up sysv-rc (2.88dsf-41+deb7u1) ... Selecting previously unselected package libmount1. (Reading database ... 9775 files and directories currently installed.) Unpacking libmount1 (from .../libmount1_2.20.1-5.3_amd64.deb) ... Setting up libmount1 (2.20.1-5.3) ... (Reading database ... 9781 files and directories currently installed.) Preparing to replace mount 2.17.2-9 (using .../mount_2.20.1-5.3_amd64.deb) ... Unpacking replacement mount ... Setting up mount (2.20.1-5.3) ... (Reading database ... 9783 files and directories currently installed.) Preparing to replace libattr1 1:2.4.44-2 (using .../libattr1_1%3a2.4.46-8_amd64.deb) ... Unpacking replacement libattr1:amd64 ... Setting up libattr1:amd64 (1:2.4.46-8) ... (Reading database ... 9784 files and directories currently installed.) Preparing to replace libacl1 2.2.49-4 (using .../libacl1_2.2.51-8_amd64.deb) ... Unpacking replacement libacl1:amd64 ... Setting up libacl1:amd64 (2.2.51-8) ... (Reading database ... 9784 files and directories currently installed.) Preparing to replace coreutils 8.5-1 (using .../coreutils_8.13-3.5_amd64.deb) ... Unpacking replacement coreutils ... Setting up coreutils (8.13-3.5) ... (Reading database ... 9705 files and directories currently installed.) Preparing to replace initscripts 2.88dsf-13.1+squeeze1 (using .../initscripts_2.88dsf-41+deb7u1_amd64.deb) ... Removing unmodified and obsolete conffile /etc/default/bootlogd ... Removing unmodified and obsolete conffile /etc/init.d/mountoverflowtmp ... Upgrading unmodified configuration file /etc/default/rcS ... Unpacking replacement initscripts ... Setting up initscripts (2.88dsf-41+deb7u1) ... Installing new version of config file /etc/init.d/bootlogs ... Installing new version of config file /etc/init.d/bootmisc.sh ... Installing new version of config file /etc/init.d/checkfs.sh ... Installing new version of config file /etc/init.d/checkroot.sh ... Installing new version of config file /etc/init.d/mountall.sh ... Installing new version of config file /etc/init.d/mountall-bootclean.sh ... Installing new version of config file /etc/init.d/mountnfs.sh ... Installing new version of config file /etc/init.d/mountnfs-bootclean.sh ... Installing new version of config file /etc/init.d/mountdevsubfs.sh ... Installing new version of config file /etc/init.d/mountkernfs.sh ... Installing new version of config file /etc/init.d/mtab.sh ... 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Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Updating /etc/profile to current default. (Reading database ... 9708 files and directories currently installed.) Preparing to replace bash 4.1-3 (using .../bash_4.2+dfsg-0.1+deb7u4_amd64.deb) ... Unpacking replacement bash ... Setting up bash (4.2+dfsg-0.1+deb7u4) ... Installing new version of config file /etc/bash.bashrc ... Installing new version of config file /etc/skel/.bashrc ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 9711 files and directories currently installed.) Preparing to replace dash 0.5.5.1-7.4 (using .../dash_0.5.7-3_amd64.deb) ... Unpacking replacement dash ... Setting up dash (0.5.7-3) ... (Reading database ... 9711 files and directories currently installed.) 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Installing new version of config file /etc/login.defs ... Installing new version of config file /etc/securetty ... (Reading database ... 9722 files and directories currently installed.) Preparing to replace ncurses-bin 5.7+20100313-5 (using .../ncurses-bin_5.9-10_amd64.deb) ... Unpacking replacement ncurses-bin ... Setting up ncurses-bin (5.9-10) ... (Reading database ... 9724 files and directories currently installed.) Preparing to replace sed 4.2.1-7 (using .../sed_4.2.1-10_amd64.deb) ... Unpacking replacement sed ... Setting up sed (4.2.1-10) ... (Reading database ... 9724 files and directories currently installed.) Preparing to replace sysvinit 2.88dsf-13.1+squeeze1 (using .../sysvinit_2.88dsf-41+deb7u1_amd64.deb) ... Unpacking replacement sysvinit ... Setting up sysvinit (2.88dsf-41+deb7u1) ... Not restarting sysvinit (Reading database ... 9724 files and directories currently installed.) Preparing to replace tar 1.23-3 (using .../tar_1.26+dfsg-0.1+deb7u1_amd64.deb) ... Unpacking replacement tar ... Setting up tar (1.26+dfsg-0.1+deb7u1) ... (Reading database ... 9725 files and directories currently installed.) Preparing to replace base-passwd 3.5.22 (using .../base-passwd_3.5.26_amd64.deb) ... Unpacking replacement base-passwd ... Setting up base-passwd (3.5.26) ... (Reading database ... 9727 files and directories currently installed.) Preparing to replace bsdutils 1:2.17.2-9 (using .../bsdutils_1%3a2.20.1-5.3_amd64.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (1:2.20.1-5.3) ... (Reading database ... 9727 files and directories currently installed.) Preparing to replace ncurses-base 5.7+20100313-5 (using .../ncurses-base_5.9-10_all.deb) ... Unpacking replacement ncurses-base ... Setting up ncurses-base (5.9-10) ... Installing new version of config file /etc/terminfo/README ... (Reading database ... 9729 files and directories currently installed.) Preparing to replace gpgv 1.4.10-4+squeeze4 (using .../gpgv_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.12-7+deb7u9) ... (Reading database ... 9729 files and directories currently installed.) Preparing to replace debian-archive-keyring 2010.08.28+squeeze1 (using .../debian-archive-keyring_2014.3~deb7u1_all.deb) ... Unpacking replacement debian-archive-keyring ... Setting up debian-archive-keyring (2014.3~deb7u1) ... (Reading database ... 9736 files and directories currently installed.) Preparing to replace readline-common 6.1-3 (using .../readline-common_6.2+dfsg-0.1_all.deb) ... Unpacking replacement readline-common ... Setting up readline-common (6.2+dfsg-0.1) ... (Reading database ... 9735 files and directories currently installed.) Preparing to replace libreadline6 6.1-3 (using .../libreadline6_6.2+dfsg-0.1_amd64.deb) ... Unpacking replacement libreadline6:amd64 ... Setting up libreadline6:amd64 (6.2+dfsg-0.1) ... (Reading database ... 9735 files and directories currently installed.) Preparing to replace libusb-0.1-4 2:0.1.12-16 (using .../libusb-0.1-4_2%3a0.1.12-20+nmu1_amd64.deb) ... Unpacking replacement libusb-0.1-4:amd64 ... Setting up libusb-0.1-4:amd64 (2:0.1.12-20+nmu1) ... (Reading database ... 9734 files and directories currently installed.) Preparing to replace gnupg 1.4.10-4+squeeze4 (using .../gnupg_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.12-7+deb7u9) ... Selecting previously unselected package libapt-pkg4.12:amd64. dpkg: considering deconfiguration of apt, which would be broken by installation of libapt-pkg4.12:amd64 ... dpkg: yes, will deconfigure apt (broken by libapt-pkg4.12:amd64) (Reading database ... 9723 files and directories currently installed.) Unpacking libapt-pkg4.12:amd64 (from .../libapt-pkg4.12_0.9.7.9+deb7u7_amd64.deb) ... De-configuring apt ... Setting up libapt-pkg4.12:amd64 (0.9.7.9+deb7u7) ... 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Installing new version of config file /etc/cron.daily/apt ... gpg: key B98321F9: "Squeeze Stable Release Key " not changed gpg: key 473041FA: "Debian Archive Automatic Signing Key (6.0/squeeze) " not changed gpg: key 65FFB764: "Wheezy Stable Release Key " not changed gpg: key 46925553: "Debian Archive Automatic Signing Key (7.0/wheezy) " not changed gpg: key 518E17E1: "Jessie Stable Release Key " not changed gpg: key 2B90D010: "Debian Archive Automatic Signing Key (8/jessie) " not changed gpg: key C857C906: "Debian Security Archive Automatic Signing Key (8/jessie) " not changed gpg: Total number processed: 7 gpg: unchanged: 7 gpg: checking the trustdb gpg: WARNING: digest algorithm MD5 is deprecated gpg: please see http://www.gnupg.org/faq/weak-digest-algos.html for more information gpg: no ultimately trusted keys found (Reading database ... 9682 files and directories currently installed.) Preparing to replace libncurses5 5.7+20100313-5 (using .../libncurses5_5.9-10_amd64.deb) ... Unpacking replacement libncurses5:amd64 ... Setting up libncurses5:amd64 (5.9-10) ... (Reading database ... 9674 files and directories currently installed.) Preparing to replace libss2 1.41.12-4stable1 (using .../libss2_1.42.5-1.1+deb7u1_amd64.deb) ... Unpacking replacement libss2:amd64 ... Setting up libss2:amd64 (1.42.5-1.1+deb7u1) ... Selecting previously unselected package libssl1.0.0:amd64. (Reading database ... 9674 files and directories currently installed.) Unpacking libssl1.0.0:amd64 (from .../libssl1.0.0_1.0.1t-1+deb7u3_amd64.deb) ... Preparing to replace mawk 1.3.3-15 (using .../mawk_1.3.3-17_amd64.deb) ... Unpacking replacement mawk ... Preparing to replace libjpeg62-dev 6b1-1 (using .../libjpeg62-dev_6b1-3+deb7u1_amd64.deb) ... Unpacking replacement libjpeg62-dev:amd64 ... Preparing to replace libjpeg62 6b1-1 (using .../libjpeg62_6b1-3+deb7u1_amd64.deb) ... Unpacking replacement libjpeg62:amd64 ... Selecting previously unselected package libjpeg8:amd64. Unpacking libjpeg8:amd64 (from .../libjpeg8_8d-1+deb7u1_amd64.deb) ... Preparing to replace libpam-runtime 1.1.1-6.1+squeeze1 (using .../libpam-runtime_1.1.3-7.1_all.deb) ... Unpacking replacement libpam-runtime ... Setting up libpam-runtime (1.1.3-7.1) ... (Reading database ... 9703 files and directories currently installed.) Preparing to replace xz-utils 5.0.0-2 (using .../xz-utils_5.1.1alpha+20120614-2_amd64.deb) ... Unpacking replacement xz-utils ... Setting up xz-utils (5.1.1alpha+20120614-2) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode (Reading database ... 9705 files and directories currently installed.) Preparing to replace debconf-i18n 1.5.36.1 (using .../debconf-i18n_1.5.49_all.deb) ... Unpacking replacement debconf-i18n ... Preparing to replace ucf 3.0025+nmu1 (using .../ucf_3.0025+nmu3_all.deb) ... Unpacking replacement ucf ... Preparing to replace openssl 0.9.8o-4squeeze14 (using .../openssl_1.0.1t-1+deb7u3_amd64.deb) ... Unpacking replacement openssl ... Preparing to replace ca-certificates 20090814+nmu3squeeze1 (using .../ca-certificates_20130119+deb7u2_all.deb) ... Unpacking replacement ca-certificates ... Preparing to replace gcc-4.4-base 4.4.5-8 (using .../gcc-4.4-base_4.4.7-2_amd64.deb) ... Unpacking replacement gcc-4.4-base:amd64 ... Selecting previously unselected package hdf5-helpers. Unpacking hdf5-helpers (from .../hdf5-helpers_1.8.8-9+deb7u1_amd64.deb) ... Setting up libc-dev-bin (2.13-38+deb7u12) ... Setting up linux-libc-dev:amd64 (3.2.96-3) ... Setting up libc6-dev:amd64 (2.13-38+deb7u12) ... Setting up libquadmath0:amd64 (4.7.2-5) ... Setting up libgfortran3:amd64 (4.7.2-5) ... Setting up adduser (3.113+nmu3) ... Installing new version of config file /etc/deluser.conf ... Setting up libibverbs1 (1.1.6-1) ... Setting up libnuma1 (2.0.8~rc4-1) ... Setting up libtorque2 (2.4.16+dfsg-1+deb7u4) ... Setting up libopenmpi1.3 (1.4.5-1) ... Setting up openmpi-common (1.4.5-1) ... Setting up libibverbs-dev (1.1.6-1) ... Setting up libopenmpi-dev (1.4.5-1) ... Setting up libtext-charwidth-perl (0.04-7+b1) ... Setting up libtext-iconv-perl (1.7-5) ... Setting up liblocale-gettext-perl (1.05-7+b1) ... Setting up zlib1g-dev:amd64 (1:1.2.7.dfsg-13) ... Setting up libhdf5-openmpi-7 (1.8.8-9+deb7u1) ... Setting up libgpg-error0:amd64 (1.10-3.1) ... Setting up libgcrypt11:amd64 (1.5.0-5+deb7u6) ... Setting up libp11-kit0:amd64 (0.12-3) ... Setting up libtasn1-3:amd64 (2.13-2+deb7u5) ... Setting up libgnutls26:amd64 (2.12.20-8+deb7u5) ... Setting up libkeyutils1:amd64 (1.5.5-3+deb7u1) ... Setting up libkrb5support0:amd64 (1.10.1+dfsg-5+deb7u9) ... Setting up libk5crypto3:amd64 (1.10.1+dfsg-5+deb7u9) ... Setting up libkrb5-3:amd64 (1.10.1+dfsg-5+deb7u9) ... Setting up libgssapi-krb5-2:amd64 (1.10.1+dfsg-5+deb7u9) ... Setting up libidn11:amd64 (1.25-2+deb7u3) ... Setting up libsasl2-2:amd64 (2.1.25.dfsg1-6+deb7u1) ... Setting up libldap-2.4-2:amd64 (2.4.31-2+deb7u3) ... Installing new version of config file /etc/ldap/ldap.conf ... Setting up librtmp0:amd64 (2.4+20111222.git4e06e21-1+deb7u1) ... Setting up libssh2-1:amd64 (1.4.2-1.1+deb7u2) ... Setting up libcurl3-gnutls:amd64 (7.26.0-1+wheezy24) ... Setting up libnetcdfc7 (1:4.1.3-6+b1) ... Setting up libminc2-1:amd64 (2.1.10-1+b1) ... Setting up libnetcdff5 (1:4.1.3-6+b1) ... Setting up libnetcdfc++4 (1:4.1.3-6+b1) ... Setting up libcf0 (1:4.1.3-6+b1) ... Setting up libnetcdf-dev (1:4.1.3-6+b1) ... Setting up libssl1.0.0:amd64 (1.0.1t-1+deb7u3) ... Setting up mawk (1.3.3-17) ... Setting up libjpeg62:amd64 (6b1-3+deb7u1) ... Setting up libjpeg62-dev:amd64 (6b1-3+deb7u1) ... Setting up libjpeg8:amd64 (8d-1+deb7u1) ... Setting up debconf-i18n (1.5.49) ... Setting up ucf (3.0025+nmu3) ... Setting up openssl (1.0.1t-1+deb7u3) ... Installing new version of config file /etc/ssl/openssl.cnf ... Setting up ca-certificates (20130119+deb7u2) ... Setting up gcc-4.4-base:amd64 (4.4.7-2) ... Setting up hdf5-helpers (1.8.8-9+deb7u1) ... Processing triggers for ca-certificates ... Clearing symlinks in /etc/ssl/certs...done. Updating certificates in /etc/ssl/certs... 165 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d....done. 1m19.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-yf', 'dist-upgrade'] 1m19.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m20.6s DUMP: 4c169f7d24c584d4e8d5c8875d926be1 - 1m20.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m20.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'show', 'libminc-dev'] 1m20.7s DUMP: Package: libminc-dev Source: minc (2.1.10-1) Version: 2.1.10-1+b1 Installed-Size: 1716 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: libminc0-dev Depends: libminc2-1 (= 2.1.10-1+b1), libnetcdf-dev, libhdf5-dev Conflicts: libminc0-dev Description: MNI medical image format development environment Homepage: http://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Description-md5: 5c57f172bada7cef7c79824fa62b2d63 Tag: field::medicine, field::medicine:imaging, implemented-in::c, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/m/minc/libminc-dev_2.1.10-1+b1_amd64.deb Size: 883190 MD5sum: 5e9412a0f6843b42fe5dc0e3fa2d588c SHA1: ab21693a4f47e82d30765978ec983506cc0e498a SHA256: e9746a9e6dbd12835523e985a533547e8aea69ced8a7fc5d2e1a8caa835423fa 1m20.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'show', 'libminc-dev'] 1m20.7s INFO: apt-cache knows about the following packages: libminc-dev 1m20.7s INFO: Running scripts pre_install 1m20.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_database-server'] 1m20.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_database-server'] 1m20.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_exceptions'] 1m20.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_exceptions'] 1m20.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_extras'] 1m20.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_extras'] 1m20.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture'] 1m20.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture'] 1m20.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m20.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m20.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy'] 1m20.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror.bm.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 1m20.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy'] 1m20.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy', 'libminc-dev'] 1m20.8s DUMP: libminc-dev: Installed: (none) Candidate: 2.1.10-1+b1 Version table: 2.1.10-1+b1 0 500 http://mirror.bm.debian.org/debian/ wheezy/main amd64 Packages 1m20.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy', 'libminc-dev'] 1m20.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-y', 'install', 'libminc-dev'] 1m27.1s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libibverbs-dev libjpeg62 libopenmpi-dev libssl0.9.8 openmpi-common Use 'apt-get autoremove' to remove them. The following extra packages will be installed: libhdf5-7 libhdf5-dev libjpeg8-dev Suggested packages: libhdf5-doc The following packages will be REMOVED: libhdf5-openmpi-7 libjpeg62-dev The following NEW packages will be installed: libhdf5-7 libhdf5-dev libjpeg8-dev libminc-dev 0 upgraded, 4 newly installed, 2 to remove and 0 not upgraded. Need to get 5070 kB of archives. After this operation, 20.9 MB of additional disk space will be used. Get:1 http://security.debian.org/ wheezy/updates/main libhdf5-7 amd64 1.8.8-9+deb7u1 [1432 kB] Get:2 http://security.debian.org/ wheezy/updates/main libhdf5-dev amd64 1.8.8-9+deb7u1 [2509 kB] Get:3 http://mirror.bm.debian.org/debian/ wheezy/main libjpeg8-dev amd64 8d-1+deb7u1 [245 kB] Get:4 http://mirror.bm.debian.org/debian/ wheezy/main libminc-dev amd64 2.1.10-1+b1 [883 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5070 kB in 4s (1020 kB/s) (Reading database ... 9470 files and directories currently installed.) Removing libjpeg62-dev:amd64 ... dpkg: libhdf5-openmpi-7: dependency problems, but removing anyway as you requested: libminc2-1:amd64 depends on libhdf5-7; however: Package libhdf5-7 is not installed. Package libhdf5-openmpi-7 which provides libhdf5-7 is to be removed. libnetcdfc7 depends on libhdf5-7; however: Package libhdf5-7 is not installed. Package libhdf5-openmpi-7 which provides libhdf5-7 is to be removed. libnetcdfc++4 depends on libhdf5-7; however: Package libhdf5-7 is not installed. Package libhdf5-openmpi-7 which provides libhdf5-7 is to be removed. libnetcdff5 depends on libhdf5-7; however: Package libhdf5-7 is not installed. Package libhdf5-openmpi-7 which provides libhdf5-7 is to be removed. Removing libhdf5-openmpi-7 ... Selecting previously unselected package libhdf5-7. (Reading database ... 9437 files and directories currently installed.) Unpacking libhdf5-7 (from .../libhdf5-7_1.8.8-9+deb7u1_amd64.deb) ... Selecting previously unselected package libjpeg8-dev:amd64. Unpacking libjpeg8-dev:amd64 (from .../libjpeg8-dev_8d-1+deb7u1_amd64.deb) ... Selecting previously unselected package libhdf5-dev. Unpacking libhdf5-dev (from .../libhdf5-dev_1.8.8-9+deb7u1_amd64.deb) ... Selecting previously unselected package libminc-dev. Unpacking libminc-dev (from .../libminc-dev_2.1.10-1+b1_amd64.deb) ... Setting up libhdf5-7 (1.8.8-9+deb7u1) ... Setting up libjpeg8-dev:amd64 (8d-1+deb7u1) ... Setting up libhdf5-dev (1.8.8-9+deb7u1) ... Setting up libminc-dev (2.1.10-1+b1) ... 1m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-y', 'install', 'libminc-dev'] 1m27.1s INFO: Running scripts post_install 1m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_install_exceptions'] 1m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_install_exceptions'] 1m27.1s INFO: Running scripts post_distupgrade 1m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m27.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m27.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_exceptions'] 1m27.2s DUMP: FIXING /usr/share/keyrings/debian-archive-removed-keys.gpg~ `/usr/share/keyrings/debian-archive-removed-keys.gpg~' -> `/usr/share/keyrings/debian-archive-removed-keys.gpg' 1m27.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_exceptions'] 1m27.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_experimental'] 1m27.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_experimental'] 1m27.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m27.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m27.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_hack_debsums'] 1m27.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_hack_debsums'] 1m27.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m27.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m27.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_zz_backports'] 1m27.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_distupgrade_zz_backports'] 1m27.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m28.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m28.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m29.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m29.8s INFO: Running scripts pre_install 1m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_database-server'] 1m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_database-server'] 1m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_exceptions'] 1m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_exceptions'] 1m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_extras'] 1m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_extras'] 1m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture'] 1m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture'] 1m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy'] 1m29.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror.bm.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 1m29.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy'] 1m29.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy', 'libminc-dev'] 1m29.9s DUMP: libminc-dev: Installed: 2.1.10-1+b1 Candidate: 2.1.10-1+b1 Version table: *** 2.1.10-1+b1 0 500 http://mirror.bm.debian.org/debian/ wheezy/main amd64 Packages 100 /var/lib/dpkg/status 1m29.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-cache', 'policy', 'libminc-dev'] 1m29.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-y', 'install', 'libminc-dev=2.1.10-1+b1'] 1m30.4s DUMP: Reading package lists... Building dependency tree... Reading state information... libminc-dev is already the newest version. The following packages were automatically installed and are no longer required: libibverbs-dev libibverbs1 libjpeg62 libnuma1 libopenmpi-dev libopenmpi1.3 libssl0.9.8 libtorque2 openmpi-common Use 'apt-get autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m30.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', '-y', 'install', 'libminc-dev=2.1.10-1+b1'] 1m30.4s INFO: Running scripts post_install 1m30.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_install_exceptions'] 1m30.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_install_exceptions'] 1m30.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m31.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m31.7s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u4 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed ca-certificates ca-certificates 20130119+deb7u2 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.4-base:amd64 gcc-4.4-base 4.4.7-2 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u9 install ok installed gpgv gpgv 1.4.12-7+deb7u9 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hdf5-helpers hdf5-helpers 1.8.8-9+deb7u1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u12 install ok installed libc-dev-bin libc-dev-bin 2.13-38+deb7u12 install ok installed libc6:amd64 libc6 2.13-38+deb7u12 install ok installed libc6-dev:amd64 libc6-dev 2.13-38+deb7u12 install ok installed libcf0 libcf0 1:4.1.3-6+b1 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libcurl3-gnutls:amd64 libcurl3-gnutls 7.26.0-1+wheezy24 install ok installed libdb4.8 libdb4.8 4.8.30-2 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5+deb7u1 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed libgcrypt11:amd64 libgcrypt11 1.5.0-5+deb7u6 install ok installed libgfortran3:amd64 libgfortran3 4.7.2-5 install ok installed libgnutls26:amd64 libgnutls26 2.12.20-8+deb7u5 install ok installed libgpg-error0:amd64 libgpg-error0 1.10-3.1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.10.1+dfsg-5+deb7u9 install ok installed libhdf5-7 libhdf5-7 1.8.8-9+deb7u1 install ok installed libhdf5-dev libhdf5-dev 1.8.8-9+deb7u1 deinstall ok config-files libhdf5-openmpi-1.8.4 libhdf5-openmpi-1.8.4 1.8.4-patch1-2 deinstall ok config-files libhdf5-openmpi-7 libhdf5-openmpi-7 1.8.8-9+deb7u1 install ok installed libibverbs-dev libibverbs-dev 1.1.6-1 install ok installed libibverbs1 libibverbs1 1.1.6-1 install ok installed libidn11:amd64 libidn11 1.25-2+deb7u3 install ok installed libjpeg62:amd64 libjpeg62 6b1-3+deb7u1 install ok installed libjpeg8:amd64 libjpeg8 8d-1+deb7u1 install ok installed libjpeg8-dev:amd64 libjpeg8-dev 8d-1+deb7u1 install ok installed libk5crypto3:amd64 libk5crypto3 1.10.1+dfsg-5+deb7u9 install ok installed libkeyutils1:amd64 libkeyutils1 1.5.5-3+deb7u1 install ok installed libkrb5-3:amd64 libkrb5-3 1.10.1+dfsg-5+deb7u9 install ok installed libkrb5support0:amd64 libkrb5support0 1.10.1+dfsg-5+deb7u9 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.31-2+deb7u3 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma2 liblzma2 5.0.0-2 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libminc-dev libminc-dev 2.1.10-1+b1 install ok installed libminc2-1:amd64 libminc2-1 2.1.10-1+b1 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libnetcdf-dev libnetcdf-dev 1:4.1.3-6+b1 deinstall ok config-files libnetcdf6 libnetcdf6 1:4.1.1-5 install ok installed libnetcdfc++4 libnetcdfc++4 1:4.1.3-6+b1 install ok installed libnetcdfc7 libnetcdfc7 1:4.1.3-6+b1 install ok installed libnetcdff5 libnetcdff5 1:4.1.3-6+b1 install ok installed libnuma1 libnuma1 2.0.8~rc4-1 install ok installed libopenmpi-dev libopenmpi-dev 1.4.5-1 install ok installed libopenmpi1.3 libopenmpi1.3 1.4.5-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.12-3 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libquadmath0:amd64 libquadmath0 4.7.2-5 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed librtmp0:amd64 librtmp0 2.4+20111222.git4e06e21-1+deb7u1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.25.dfsg1-6+deb7u1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libssh2-1:amd64 libssh2-1 1.4.2-1.1+deb7u2 install ok installed libssl0.9.8 libssl0.9.8 0.9.8o-4squeeze14 install ok installed libssl1.0.0:amd64 libssl1.0.0 1.0.1t-1+deb7u3 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtasn1-3:amd64 libtasn1-3 2.13-2+deb7u5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libtorque2 libtorque2 2.4.16+dfsg-1+deb7u4 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed linux-libc-dev:amd64 linux-libc-dev 3.2.96-3 install ok installed login login 1:4.1.5.1-1+deb7u1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u12 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed openmpi-common openmpi-common 1.4.5-1 install ok installed openssl openssl 1.0.1t-1+deb7u3 install ok installed passwd passwd 1:4.1.5.1-1+deb7u1 install ok installed perl-base perl-base 5.14.2-21+deb7u5 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7+deb7u1 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1+deb7u1 install ok installed tzdata tzdata 2017c-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.2.7.dfsg-13 1m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m33.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', '-ac', '--ignore-obsolete'] 1m35.0s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', '-ac', '--ignore-obsolete'] 1m35.0s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m35.3s DUMP: 0.15.1 1m35.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m35.3s INFO: Running adequate version 0.15.1 now. 1m35.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'libminc-dev'] 1m35.5s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'libminc-dev'] 1m35.5s INFO: Running scripts pre_remove 1m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m35.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m35.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m35.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m35.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m39.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m39.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m39.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m39.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_exceptions'] 1m39.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/pre_remove_exceptions'] 1m39.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', 'remove', 'libnetcdfc++4', 'libgssapi-krb5-2:amd64', 'libhdf5-7', 'openmpi-common', 'libgcrypt11:amd64', 'libssh2-1:amd64', 'libopenmpi-dev', 'libnetcdf-dev', 'libk5crypto3:amd64', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'zlib1g-dev:amd64', 'libtasn1-3:amd64', 'libnuma1', 'libkrb5support0:amd64', 'libssl1.0.0:amd64', 'libgfortran3:amd64', 'libcf0', 'libopenmpi1.3', 'libquadmath0:amd64', 'libcurl3-gnutls:amd64', 'libssl0.9.8', 'gcc-4.4-base:amd64', 'libnetcdfc7', 'hdf5-helpers', 'libjpeg62:amd64', 'libibverbs1', 'libgpg-error0:amd64', 'libkrb5-3:amd64', 'libjpeg8-dev:amd64', 'ca-certificates', 'libtorque2', 'libp11-kit0:amd64', 'libidn11:amd64', 'linux-libc-dev:amd64', 'libibverbs-dev', 'libgnutls26:amd64', 'libsasl2-2:amd64', 'libhdf5-dev', 'libminc2-1:amd64', 'openssl', 'libc6-dev:amd64', 'librtmp0:amd64', 'libldap-2.4-2:amd64', 'libhdf5-openmpi-1.8.4', 'libnetcdff5', 'libnetcdf6', 'libc-dev-bin', 'libdb4.8', 'libhdf5-openmpi-7', 'libminc-dev'] 1m42.3s DUMP: Reading package lists... Building dependency tree... Reading state information... Package 'libhdf5-openmpi-7' is not installed, so not removed Package 'libhdf5-openmpi-1.8.4' is not installed, so not removed Package 'libnetcdf6' is not installed, so not removed The following packages will be REMOVED: ca-certificates gcc-4.4-base hdf5-helpers libc-dev-bin libc6-dev libcf0 libcurl3-gnutls libdb4.8 libgcrypt11 libgfortran3 libgnutls26 libgpg-error0 libgssapi-krb5-2 libhdf5-7 libhdf5-dev libibverbs-dev libibverbs1 libidn11 libjpeg62 libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libminc-dev libminc2-1 libnetcdf-dev libnetcdfc++4 libnetcdfc7 libnetcdff5 libnuma1 libopenmpi-dev libopenmpi1.3 libp11-kit0 libquadmath0 librtmp0 libsasl2-2 libssh2-1 libssl0.9.8 libssl1.0.0 libtasn1-3 libtorque2 linux-libc-dev openmpi-common openssl zlib1g-dev 0 upgraded, 0 newly installed, 48 to remove and 0 not upgraded. After this operation, 80.9 MB disk space will be freed. (Reading database ... 9606 files and directories currently installed.) Removing ca-certificates ... Removing dangling symlinks from /etc/ssl/certs... done. Removing gcc-4.4-base:amd64 ... Removing libminc-dev ... Removing libhdf5-dev ... Removing hdf5-helpers ... Removing zlib1g-dev:amd64 ... Removing libjpeg8-dev:amd64 ... Removing libc6-dev:amd64 ... Removing libc-dev-bin ... Removing libnetcdf-dev ... Removing libcf0 ... Removing libnetcdff5 ... Removing libnetcdfc++4 ... Removing libminc2-1:amd64 ... Removing libnetcdfc7 ... Removing libcurl3-gnutls:amd64 ... Removing libdb4.8 ... Removing librtmp0:amd64 ... Removing libldap-2.4-2:amd64 ... Removing libssh2-1:amd64 ... Removing libgnutls26:amd64 ... Removing libgcrypt11:amd64 ... Removing libhdf5-7 ... Removing libopenmpi-dev ... Removing libopenmpi1.3 ... Removing libgfortran3:amd64 ... Removing libgpg-error0:amd64 ... Removing libgssapi-krb5-2:amd64 ... Removing libibverbs-dev ... Removing libibverbs1 ... Removing libidn11:amd64 ... Removing libjpeg62:amd64 ... Removing libjpeg8:amd64 ... Removing libkrb5-3:amd64 ... Removing libk5crypto3:amd64 ... Removing libkrb5support0:amd64 ... Removing libkeyutils1:amd64 ... Removing libnuma1 ... Removing libp11-kit0:amd64 ... Removing libquadmath0:amd64 ... Removing libsasl2-2:amd64 ... Removing libssl0.9.8 ... Removing openssl ... Removing libssl1.0.0:amd64 ... Removing libtasn1-3:amd64 ... Removing libtorque2 ... Removing linux-libc-dev:amd64 ... Removing openmpi-common ... 1m42.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', 'remove', 'libnetcdfc++4', 'libgssapi-krb5-2:amd64', 'libhdf5-7', 'openmpi-common', 'libgcrypt11:amd64', 'libssh2-1:amd64', 'libopenmpi-dev', 'libnetcdf-dev', 'libk5crypto3:amd64', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'zlib1g-dev:amd64', 'libtasn1-3:amd64', 'libnuma1', 'libkrb5support0:amd64', 'libssl1.0.0:amd64', 'libgfortran3:amd64', 'libcf0', 'libopenmpi1.3', 'libquadmath0:amd64', 'libcurl3-gnutls:amd64', 'libssl0.9.8', 'gcc-4.4-base:amd64', 'libnetcdfc7', 'hdf5-helpers', 'libjpeg62:amd64', 'libibverbs1', 'libgpg-error0:amd64', 'libkrb5-3:amd64', 'libjpeg8-dev:amd64', 'ca-certificates', 'libtorque2', 'libp11-kit0:amd64', 'libidn11:amd64', 'linux-libc-dev:amd64', 'libibverbs-dev', 'libgnutls26:amd64', 'libsasl2-2:amd64', 'libhdf5-dev', 'libminc2-1:amd64', 'openssl', 'libc6-dev:amd64', 'librtmp0:amd64', 'libldap-2.4-2:amd64', 'libhdf5-openmpi-1.8.4', 'libnetcdff5', 'libnetcdf6', 'libc-dev-bin', 'libdb4.8', 'libhdf5-openmpi-7', 'libminc-dev'] 1m42.3s INFO: Running scripts post_remove 1m42.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_remove_exceptions'] 1m42.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_remove_exceptions'] 1m42.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_remove_extras'] 1m42.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_remove_extras'] 1m42.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg', '--purge', 'libnetcdfc++4', 'libgssapi-krb5-2:amd64', 'libhdf5-7', 'openmpi-common', 'libgcrypt11:amd64', 'libssh2-1:amd64', 'libopenmpi-dev', 'libnetcdf-dev', 'libk5crypto3:amd64', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'zlib1g-dev:amd64', 'libtasn1-3:amd64', 'libnuma1', 'libkrb5support0:amd64', 'libssl1.0.0:amd64', 'libgfortran3:amd64', 'libcf0', 'libopenmpi1.3', 'libquadmath0:amd64', 'libcurl3-gnutls:amd64', 'libssl0.9.8', 'gcc-4.4-base:amd64', 'libnetcdfc7', 'hdf5-helpers', 'libjpeg62:amd64', 'libibverbs1', 'libgpg-error0:amd64', 'libkrb5-3:amd64', 'libjpeg8-dev:amd64', 'ca-certificates', 'libtorque2', 'libp11-kit0:amd64', 'libidn11:amd64', 'linux-libc-dev:amd64', 'libibverbs-dev', 'libgnutls26:amd64', 'libsasl2-2:amd64', 'libhdf5-dev', 'libminc2-1:amd64', 'openssl', 'libc6-dev:amd64', 'librtmp0:amd64', 'libldap-2.4-2:amd64', 'libhdf5-openmpi-1.8.4', 'libnetcdff5', 'libnetcdf6', 'libc-dev-bin', 'libdb4.8', 'libhdf5-openmpi-7'] 1m43.1s DUMP: (Reading database ... 6797 files and directories currently installed.) Removing libnetcdfc++4 ... Purging configuration files for libnetcdfc++4 ... Removing libgssapi-krb5-2:amd64 ... Purging configuration files for libgssapi-krb5-2:amd64 ... Removing libhdf5-7 ... Purging configuration files for libhdf5-7 ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed Removing libgcrypt11:amd64 ... Purging configuration files for libgcrypt11:amd64 ... Removing libssh2-1:amd64 ... Purging configuration files for libssh2-1:amd64 ... dpkg: warning: ignoring request to remove libopenmpi-dev which isn't installed dpkg: warning: ignoring request to remove libnetcdf-dev which isn't installed Removing libk5crypto3:amd64 ... Purging configuration files for libk5crypto3:amd64 ... dpkg: warning: ignoring request to remove libjpeg8 which isn't installed Removing libkeyutils1:amd64 ... Purging configuration files for libkeyutils1:amd64 ... dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed Removing libtasn1-3:amd64 ... Purging configuration files for libtasn1-3:amd64 ... Removing libnuma1 ... Purging configuration files for libnuma1 ... Removing libkrb5support0:amd64 ... Purging configuration files for libkrb5support0:amd64 ... Removing libssl1.0.0:amd64 ... Purging configuration files for libssl1.0.0:amd64 ... Removing libgfortran3:amd64 ... Purging configuration files for libgfortran3:amd64 ... Removing libcf0 ... Purging configuration files for libcf0 ... Removing libopenmpi1.3 ... Purging configuration files for libopenmpi1.3 ... Removing libquadmath0:amd64 ... Purging configuration files for libquadmath0:amd64 ... Removing libcurl3-gnutls:amd64 ... Purging configuration files for libcurl3-gnutls:amd64 ... Removing libssl0.9.8 ... Purging configuration files for libssl0.9.8 ... dpkg: warning: ignoring request to remove gcc-4.4-base which isn't installed Removing libnetcdfc7 ... Purging configuration files for libnetcdfc7 ... dpkg: warning: ignoring request to remove hdf5-helpers which isn't installed dpkg: warning: ignoring request to remove libjpeg62 which isn't installed Removing libibverbs1 ... Purging configuration files for libibverbs1 ... Removing libgpg-error0:amd64 ... Purging configuration files for libgpg-error0:amd64 ... Removing libkrb5-3:amd64 ... Purging configuration files for libkrb5-3:amd64 ... dpkg: warning: ignoring request to remove libjpeg8-dev which isn't installed Removing ca-certificates ... Purging configuration files for ca-certificates ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libtorque2 ... Purging configuration files for libtorque2 ... Removing libp11-kit0:amd64 ... Purging configuration files for libp11-kit0:amd64 ... Removing libidn11:amd64 ... Purging configuration files for libidn11:amd64 ... dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed Removing libgnutls26:amd64 ... Purging configuration files for libgnutls26:amd64 ... Removing libsasl2-2:amd64 ... Purging configuration files for libsasl2-2:amd64 ... dpkg: warning: ignoring request to remove libhdf5-dev which isn't installed Removing libminc2-1:amd64 ... Purging configuration files for libminc2-1:amd64 ... Removing openssl ... Purging configuration files for openssl ... dpkg: warning: ignoring request to remove libc6-dev which isn't installed Removing librtmp0:amd64 ... Purging configuration files for librtmp0:amd64 ... Removing libldap-2.4-2:amd64 ... Purging configuration files for libldap-2.4-2:amd64 ... Removing libhdf5-openmpi-1.8.4 ... Purging configuration files for libhdf5-openmpi-1.8.4 ... Removing libnetcdff5 ... Purging configuration files for libnetcdff5 ... Removing libnetcdf6 ... Purging configuration files for libnetcdf6 ... dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libdb4.8 which isn't installed Removing libhdf5-openmpi-7 ... Purging configuration files for libhdf5-openmpi-7 ... 1m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg', '--purge', 'libnetcdfc++4', 'libgssapi-krb5-2:amd64', 'libhdf5-7', 'openmpi-common', 'libgcrypt11:amd64', 'libssh2-1:amd64', 'libopenmpi-dev', 'libnetcdf-dev', 'libk5crypto3:amd64', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'zlib1g-dev:amd64', 'libtasn1-3:amd64', 'libnuma1', 'libkrb5support0:amd64', 'libssl1.0.0:amd64', 'libgfortran3:amd64', 'libcf0', 'libopenmpi1.3', 'libquadmath0:amd64', 'libcurl3-gnutls:amd64', 'libssl0.9.8', 'gcc-4.4-base:amd64', 'libnetcdfc7', 'hdf5-helpers', 'libjpeg62:amd64', 'libibverbs1', 'libgpg-error0:amd64', 'libkrb5-3:amd64', 'libjpeg8-dev:amd64', 'ca-certificates', 'libtorque2', 'libp11-kit0:amd64', 'libidn11:amd64', 'linux-libc-dev:amd64', 'libibverbs-dev', 'libgnutls26:amd64', 'libsasl2-2:amd64', 'libhdf5-dev', 'libminc2-1:amd64', 'openssl', 'libc6-dev:amd64', 'librtmp0:amd64', 'libldap-2.4-2:amd64', 'libhdf5-openmpi-1.8.4', 'libnetcdff5', 'libnetcdf6', 'libc-dev-bin', 'libdb4.8', 'libhdf5-openmpi-7'] 1m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg', '--purge', 'libminc-dev'] 1m43.1s DUMP: dpkg: warning: ignoring request to remove libminc-dev which isn't installed 1m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg', '--purge', 'libminc-dev'] 1m43.1s INFO: Running scripts post_purge 1m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_purge_exceptions'] 1m43.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_purge_exceptions'] 1m43.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg', '--purge', '--pending'] 1m43.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg', '--purge', '--pending'] 1m43.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg', '--remove', '--pending'] 1m43.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg', '--remove', '--pending'] 1m43.2s INFO: Running scripts post_test 1m43.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_test_exceptions'] 1m43.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'tmp/scripts/post_test_exceptions'] 1m43.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m44.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m44.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg-divert', '--list'] 1m44.2s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m44.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'dpkg-divert', '--list'] 1m44.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', 'clean'] 1m44.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpHO3CVe', 'apt-get', 'clean'] 1m44.3s DEBUG: Recording chroot state 1m47.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/shm'] 1m48.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/shm'] 1m48.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/console'] 1m48.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/console'] 1m48.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/ptmx'] 1m48.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/ptmx'] 1m48.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/pts'] 1m48.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/dev/pts'] 1m48.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/proc'] 1m48.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpHO3CVe/proc'] 1m48.1s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m48.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpHO3CVe'] 1m48.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpHO3CVe 1m48.3s INFO: PASS: Upgrading between Debian distributions. 1m48.3s INFO: PASS: All tests. 1m48.3s INFO: piuparts run ends. ret=0 End: 2018-02-02 21:20:39 UTC