Start: 2024-10-27 04:42:50 GMT [stable] Package: gbrowse-calign Source: gbrowse (2.56+dfsg-11) Version: 2.56+dfsg-11+b1 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.36.0-4), perlapi-5.36.0, libc6 (>= 2.4), gbrowse Description: CAlign helper Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Description-md5: 52106883c9df300bab833de801839ea2 Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-11+b1_amd64.deb Size: 35356 MD5sum: e7cebff2c3a2b818557e9220cd0589fa SHA256: cc4c3b3d2032f45907a7e739a3707a4b0ed4aab012a1778dcba030689458bc77 [testing] Package: gbrowse-calign Source: gbrowse (2.56+dfsg-12) Version: 2.56+dfsg-12+b3 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.40.0-6), perlapi-5.40.0, libc6 (>= 2.4), gbrowse Description: CAlign helper Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Description-md5: 52106883c9df300bab833de801839ea2 Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-12+b3_amd64.deb Size: 34548 MD5sum: 768a4862d87eaa452403c9cc37a9d3c1 SHA256: 311b70df31dc7a1b55fea3d13caf41a526ea648d1b964152ff9184eb9e8a44b4 [sid] Package: gbrowse-calign Source: gbrowse (2.56+dfsg-12) Version: 2.56+dfsg-12+b3 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.40.0-6), perlapi-5.40.0, libc6 (>= 2.4), gbrowse Description: CAlign helper Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Description-md5: 52106883c9df300bab833de801839ea2 Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-12+b3_amd64.deb Size: 34548 MD5sum: 768a4862d87eaa452403c9cc37a9d3c1 SHA256: 311b70df31dc7a1b55fea3d13caf41a526ea648d1b964152ff9184eb9e8a44b4 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat --apt gbrowse-calign=2.56+dfsg-12+b3 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat --apt gbrowse-calign=2.56+dfsg-12+b3 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpnqhowlx7 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpnqhowlx7 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/proc'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/proc'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpnqhowlx7/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', 'update'] 0m1.3s DUMP: Hit:1 http://deb.debian.org/debian bookworm InRelease Reading package lists... 0m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', 'update'] 0m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-yf', 'dist-upgrade'] 0m1.7s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-yf', 'dist-upgrade'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.0s DUMP: 14b5c1b94e8a6c425b0bba0e4df4ee12 - 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.0s INFO: Running scripts post_setup 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_dummy_users'] 0m2.8s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_dummy_users'] 0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_forbid_home'] 0m2.9s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_forbid_home'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.9s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_minimize'] 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_minimize'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_zz_backports'] 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_setup_zz_backports'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.9s DUMP: install ok installed adduser adduser 3.134 install ok installed apt apt 2.6.1 install ok installed base-files base-files 12.4+deb12u7 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2+b7 install ok installed bsdutils bsdutils 1:2.38.1-5+deb12u1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-2 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2023.3+deb12u1 install ok installed debianutils debianutils 5.7-0.5~deb12u1 install ok installed diffutils diffutils 1:3.8-4 install ok installed dpkg dpkg 1.21.22 install ok installed e2fsprogs e2fsprogs 1.47.0-2 install ok installed findutils findutils 4.9.0-4 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14 install ok installed gpgv gpgv 2.2.40-1.1 install ok installed grep grep 3.8-5 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.6.1 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.9-1 install ok installed libaudit1:amd64 libaudit1 1:3.0.9-1 install ok installed libblkid1:amd64 libblkid1 2.38.1-5+deb12u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-9+deb12u8 install ok installed libc6:amd64 libc6 2.36-9+deb12u8 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b3 install ok installed libcap2:amd64 libcap2 1:2.66-4 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.270 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.9-2+deb12u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.2 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-5+deb12u1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6+deb12u1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6+deb12u1 install ok installed libpam-runtime libpam-runtime 1.5.2-6+deb12u1 install ok installed libpam0g:amd64 libpam0g 1.5.2-6+deb12u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+deb12u1 install ok installed libselinux1:amd64 libselinux1 3.4-1+b6 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b5 install ok installed libsepol2:amd64 libsepol2 3.4-2.1 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-5+deb12u1 install ok installed libss2:amd64 libss2 1.47.0-2 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14 install ok installed libsystemd0:amd64 libsystemd0 252.30-1~deb12u2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.4-4 install ok installed libudev1:amd64 libudev1 252.30-1~deb12u2 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-5+deb12u1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.4+dfsg2-5 install ok installed login login 1:4.13+dfsg1-1+b1 install ok installed logsave logsave 1.47.0-2 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-5+deb12u1 install ok installed ncurses-base ncurses-base 6.4-4 install ok installed ncurses-bin ncurses-bin 6.4-4 install ok installed passwd passwd 1:4.13+dfsg1-1+b1 install ok installed perl-base perl-base 5.36.0-7+deb12u1 install ok installed sed sed 4.9-1 install ok installed sysvinit-utils sysvinit-utils 3.06-4 install ok installed tar tar 1.34+dfsg-1.2+deb12u1 install ok installed tzdata tzdata 2024a-0+deb12u1 install ok installed usr-is-merged usr-is-merged 37~deb12u1 install ok installed util-linux util-linux 2.38.1-5+deb12u1 install ok installed util-linux-extra util-linux-extra 2.38.1-5+deb12u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.9s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat 0m2.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 0m3.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 0m3.4s INFO: Running scripts is_testable 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/is_testable_uninstallable'] 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/is_testable_uninstallable'] 0m3.4s INFO: Running scripts pre_test 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_test_exceptions'] 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_test_exceptions'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_test_root_password'] 0m3.5s DUMP: New password: Retype new password: passwd: password updated successfully 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_test_root_password'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 0m3.8s DUMP: Package: gbrowse-calign Source: gbrowse (2.56+dfsg-11) Version: 2.56+dfsg-11+b1 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.36.0-4), perlapi-5.36.0, libc6 (>= 2.4), gbrowse Description-en: CAlign helper Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). . This package provides the CAlign helper for use with Realign. It speeds up Smith-Waterman alignment. Description-md5: 52106883c9df300bab833de801839ea2 Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-11+b1_amd64.deb Size: 35356 MD5sum: e7cebff2c3a2b818557e9220cd0589fa SHA256: cc4c3b3d2032f45907a7e739a3707a4b0ed4aab012a1778dcba030689458bc77 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 0m3.8s INFO: apt-cache knows about the following packages: gbrowse-calign 0m3.8s INFO: Running scripts pre_install 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_database-server'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_database-server'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_exceptions'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_exceptions'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_extras'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_extras'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy'] 0m4.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release v=12.7,o=Debian,a=stable,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy', 'gbrowse-calign'] 0m4.1s DUMP: gbrowse-calign: Installed: (none) Candidate: 2.56+dfsg-11+b1 Version table: 2.56+dfsg-11+b1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy', 'gbrowse-calign'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-y', 'install', 'gbrowse-calign'] 0m22.7s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: apache2 apache2-bin apache2-data apache2-utils bioperl ca-certificates fontconfig-config fonts-dejavu-core gbrowse libabsl20220623 libalgorithm-diff-perl libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl libaom3 libapache-dbi-perl libapache2-mod-perl2 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libavif15 libbio-coordinate-perl libbio-db-biofetch-perl libbio-db-gff-perl libbio-db-seqfeature-perl libbio-graphics-perl libbio-perl-perl libbrotli1 libbsd0 libcapture-tiny-perl libcgi-pm-perl libcgi-session-perl libclass-data-inheritable-perl libclone-perl libcommon-sense-perl libcurl4 libdata-stag-perl libdav1d6 libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libde265-0 libdeflate0 libdevel-stacktrace-perl libdevel-symdump-perl libencode-locale-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfile-listing-perl libfontconfig1 libfreetype6 libgav1-1 libgd-perl libgd3 libgdbm-compat4 libgdbm6 libgssapi-krb5-2 libheif1 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjansson4 libjbig0 libjpeg62-turbo libjs-prototype libjs-scriptaculous libjson-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblerc4 liblist-moreutils-perl liblist-moreutils-xs-perl liblua5.3-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libncursesw6 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnuma1 libperl5.36 libpng16-16 libpq5 libproc2-0 libpsl5 librav1e0 libreadline8 libregexp-ipv6-perl librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libssl3 libstatistics-descriptive-perl libstring-approx-perl libsub-uplevel-perl libsvtav1enc1 libterm-readkey-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl libtiff6 libtimedate-perl libtry-tiny-perl liburi-perl libvm-ec2-perl libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx265-199 libxau6 libxcb1 libxdmcp6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxpm4 libyuv0 media-types netbase openssl perl perl-modules-5.36 perl-openssl-defaults procps readline-common sensible-utils sqlite3 ucf Suggested packages: apache2-doc apache2-suexec-pristine | apache2-suexec-custom www-browser groff-base gbrowse-data libfile-nfslock-perl libev-perl libevent-perl libio-async-perl libpoe-perl libtask-weaken-perl libxml-sax-expatxs-perl libmldbm-perl libnet-daemon-perl libsql-statement-perl libgd-tools gdbm-l10n krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libsub-name-perl libbusiness-isbn-perl libauthen-ntlm-perl perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make libtap-harness-archive-perl debhelper readline-doc sqlite3-doc Recommended packages: ssl-cert bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl libyaml-perl libace-perl libxml-twig-perl libset-scalar-perl libalgorithm-diff-xs-perl libasync-interrupt-perl libev-perl | libevent-perl libguard-perl libapache2-reload-perl libbsd-resource-perl libbio-scf-perl libberkeleydb-perl libgd-svg-perl bioperl-run | libbio-perl-run-perl libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl libdbd-mysql-perl libgraph-perl libgraphviz-perl libhtml-tableextract-perl libpostscript-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl libxml-dom-xpath-perl libxml-parser-perl libxml-sax-writer-perl libxml-writer-perl libcgi-fast-perl libfreezethaw-perl perl-tk libxml-libxslt-perl libmldbm-perl libxml-perl libhtml-format-perl javascript-common libjson-xs-perl krb5-locales libldap-common libgpm2 publicsuffix libsasl2-modules libdata-dump-perl libhtml-form-perl libmailtools-perl libxml-sax-expat-perl psmisc The following NEW packages will be installed: apache2 apache2-bin apache2-data apache2-utils bioperl ca-certificates fontconfig-config fonts-dejavu-core gbrowse gbrowse-calign libabsl20220623 libalgorithm-diff-perl libanyevent-cachedns-perl libanyevent-http-perl libanyevent-perl libaom3 libapache-dbi-perl libapache2-mod-perl2 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libavif15 libbio-coordinate-perl libbio-db-biofetch-perl libbio-db-gff-perl libbio-db-seqfeature-perl libbio-graphics-perl libbio-perl-perl libbrotli1 libbsd0 libcapture-tiny-perl libcgi-pm-perl libcgi-session-perl libclass-data-inheritable-perl libclone-perl libcommon-sense-perl libcurl4 libdata-stag-perl libdav1d6 libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libde265-0 libdeflate0 libdevel-stacktrace-perl libdevel-symdump-perl libencode-locale-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfile-listing-perl libfontconfig1 libfreetype6 libgav1-1 libgd-perl libgd3 libgdbm-compat4 libgdbm6 libgssapi-krb5-2 libheif1 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjansson4 libjbig0 libjpeg62-turbo libjs-prototype libjs-scriptaculous libjson-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblerc4 liblist-moreutils-perl liblist-moreutils-xs-perl liblua5.3-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libncursesw6 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnuma1 libperl5.36 libpng16-16 libpq5 libproc2-0 libpsl5 librav1e0 libreadline8 libregexp-ipv6-perl librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libssl3 libstatistics-descriptive-perl libstring-approx-perl libsub-uplevel-perl libsvtav1enc1 libterm-readkey-perl libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-warn-perl libtext-diff-perl libtiff6 libtimedate-perl libtry-tiny-perl liburi-perl libvm-ec2-perl libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx265-199 libxau6 libxcb1 libxdmcp6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxpm4 libyuv0 media-types netbase openssl perl perl-modules-5.36 perl-openssl-defaults procps readline-common sensible-utils sqlite3 ucf 0 upgraded, 153 newly installed, 0 to remove and 0 not upgraded. Need to get 54.3 MB of archives. After this operation, 210 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 perl-modules-5.36 all 5.36.0-7+deb12u1 [2815 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libgdbm6 amd64 1.23-3 [72.2 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libgdbm-compat4 amd64 1.23-3 [48.2 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 libperl5.36 amd64 5.36.0-7+deb12u1 [4218 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 perl amd64 5.36.0-7+deb12u1 [239 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 libapr1 amd64 1.7.2-3 [102 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.14-1~deb12u1 [2024 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libaprutil1 amd64 1.6.3-1 [87.8 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.40.1-2 [837 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 libaprutil1-dbd-sqlite3 amd64 1.6.3-1 [13.6 kB] Get:12 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 libaprutil1-ldap amd64 1.6.3-1 [11.8 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-2+deb12u2 [32.6 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-2+deb12u2 [78.7 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:20 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-2+deb12u2 [332 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-2+deb12u2 [135 kB] Get:22 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1+deb12u1 [72.4 kB] Get:23 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-10+deb12u7 [390 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 libjansson4 amd64 2.14-2 [40.8 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 liblua5.3-0 amd64 5.3.6-2 [123 kB] Get:29 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.3~deb12u1 [687 kB] Get:31 http://deb.debian.org/debian bookworm/main amd64 apache2-bin amd64 2.4.62-1~deb12u1 [1385 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 apache2-data all 2.4.62-1~deb12u1 [160 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 apache2-utils amd64 2.4.62-1~deb12u1 [210 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 libncursesw6 amd64 6.4-4 [134 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 libproc2-0 amd64 2:4.0.2-3 [62.8 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 procps amd64 2:4.0.2-3 [709 kB] Get:38 http://deb.debian.org/debian bookworm/main amd64 apache2 amd64 2.4.62-1~deb12u1 [223 kB] Get:39 http://deb.debian.org/debian bookworm/main amd64 netbase all 6.4 [12.8 kB] Get:40 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:41 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get:42 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.14-1~deb12u1 [1423 kB] Get:43 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20230311 [153 kB] Get:44 http://deb.debian.org/debian bookworm/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:45 http://deb.debian.org/debian bookworm/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:46 http://deb.debian.org/debian bookworm/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:47 http://deb.debian.org/debian bookworm/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:48 http://deb.debian.org/debian bookworm/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:49 http://deb.debian.org/debian bookworm/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:50 http://deb.debian.org/debian bookworm/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:51 http://deb.debian.org/debian bookworm/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get:52 http://deb.debian.org/debian bookworm/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:53 http://deb.debian.org/debian bookworm/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:54 http://deb.debian.org/debian bookworm/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:55 http://deb.debian.org/debian bookworm/main amd64 libtest-differences-perl all 0.69-1 [18.9 kB] Get:56 http://deb.debian.org/debian bookworm/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:57 http://deb.debian.org/debian bookworm/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:58 http://deb.debian.org/debian bookworm/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:59 http://deb.debian.org/debian bookworm/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get:60 http://deb.debian.org/debian bookworm/main amd64 bioperl all 1.7.8-1 [246 kB] Get:61 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get:62 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get:63 http://deb.debian.org/debian bookworm/main amd64 libaom3 amd64 3.6.0-1+deb12u1 [1851 kB] Get:64 http://deb.debian.org/debian bookworm/main amd64 libdav1d6 amd64 1.0.0-2+deb12u1 [513 kB] Get:65 http://deb.debian.org/debian bookworm/main amd64 libabsl20220623 amd64 20220623.1-1 [391 kB] Get:66 http://deb.debian.org/debian bookworm/main amd64 libgav1-1 amd64 0.18.0-1+b1 [332 kB] Get:67 http://deb.debian.org/debian bookworm/main amd64 librav1e0 amd64 0.5.1-6 [763 kB] Get:68 http://deb.debian.org/debian bookworm/main amd64 libsvtav1enc1 amd64 1.4.1+dfsg-1 [2121 kB] Get:69 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get:70 http://deb.debian.org/debian bookworm/main amd64 libyuv0 amd64 0.0~git20230123.b2528b0-1 [168 kB] Get:71 http://deb.debian.org/debian bookworm/main amd64 libavif15 amd64 0.11.1-1 [93.8 kB] Get:72 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get:73 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-5+deb12u3 [398 kB] Get:74 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get:75 http://deb.debian.org/debian bookworm/main amd64 libde265-0 amd64 1.0.11-1+deb12u2 [185 kB] Get:76 http://deb.debian.org/debian bookworm/main amd64 libnuma1 amd64 2.0.16-1 [21.0 kB] Get:77 http://deb.debian.org/debian bookworm/main amd64 libx265-199 amd64 3.5-2+b1 [1150 kB] Get:78 http://deb.debian.org/debian bookworm/main amd64 libheif1 amd64 1.15.1-1 [215 kB] Get:79 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get:80 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get:81 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get:82 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.2+deb12u1 [286 kB] Get:83 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-6+deb12u1 [316 kB] Get:84 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:85 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get:86 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:87 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:88 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2+deb12u2 [292 kB] Get:89 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2+deb12u2 [760 kB] Get:90 http://deb.debian.org/debian bookworm/main amd64 libxpm4 amd64 1:3.5.12-1.1+deb12u1 [48.6 kB] Get:91 http://deb.debian.org/debian bookworm/main amd64 libgd3 amd64 2.3.3-9 [124 kB] Get:92 http://deb.debian.org/debian bookworm/main amd64 libgd-perl amd64 2.76-4+b1 [132 kB] Get:93 http://deb.debian.org/debian bookworm/main amd64 libdevel-symdump-perl all 2.18-5 [15.8 kB] Get:94 http://deb.debian.org/debian bookworm/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:95 http://deb.debian.org/debian bookworm/main amd64 liburi-perl all 5.17-1 [90.4 kB] Get:96 http://deb.debian.org/debian bookworm/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:97 http://deb.debian.org/debian bookworm/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:98 http://deb.debian.org/debian bookworm/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:99 http://deb.debian.org/debian bookworm/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:100 http://deb.debian.org/debian bookworm/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:101 http://deb.debian.org/debian bookworm/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:102 http://deb.debian.org/debian bookworm/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:103 http://deb.debian.org/debian bookworm/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:104 http://deb.debian.org/debian bookworm/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:105 http://deb.debian.org/debian bookworm/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:106 http://deb.debian.org/debian bookworm/main amd64 libhttp-message-perl all 6.44-1 [81.7 kB] Get:107 http://deb.debian.org/debian bookworm/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:108 http://deb.debian.org/debian bookworm/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:109 http://deb.debian.org/debian bookworm/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:110 http://deb.debian.org/debian bookworm/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:111 http://deb.debian.org/debian bookworm/main amd64 libio-socket-ssl-perl all 2.081-2 [219 kB] Get:112 http://deb.debian.org/debian bookworm/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:113 http://deb.debian.org/debian bookworm/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:114 http://deb.debian.org/debian bookworm/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:115 http://deb.debian.org/debian bookworm/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:116 http://deb.debian.org/debian bookworm/main amd64 libwww-perl all 6.68-1 [186 kB] Get:117 http://deb.debian.org/debian bookworm/main amd64 libapache2-mod-perl2 amd64 2.0.12-1+b2 [879 kB] Get:118 http://deb.debian.org/debian bookworm/main amd64 libdbi-perl amd64 1.643-4 [773 kB] Get:119 http://deb.debian.org/debian bookworm/main amd64 libapache-dbi-perl all 1.12-3 [48.5 kB] Get:120 http://deb.debian.org/debian bookworm/main amd64 libbio-db-biofetch-perl all 1.7.3-4 [17.5 kB] Get:121 http://deb.debian.org/debian bookworm/main amd64 libcgi-pm-perl all 4.55-1 [220 kB] Get:122 http://deb.debian.org/debian bookworm/main amd64 libbio-db-gff-perl all 1.7.4-1 [273 kB] Get:123 http://deb.debian.org/debian bookworm/main amd64 libpq5 amd64 15.8-0+deb12u1 [188 kB] Get:124 http://deb.debian.org/debian bookworm/main amd64 libdbd-pg-perl amd64 3.16.0-2 [209 kB] Get:125 http://deb.debian.org/debian bookworm/main amd64 libdbd-sqlite3-perl amd64 1.72-1 [179 kB] Get:126 http://deb.debian.org/debian bookworm/main amd64 libbio-db-seqfeature-perl all 1.7.4-2 [169 kB] Get:127 http://deb.debian.org/debian bookworm/main amd64 libbio-graphics-perl all 2.40-6 [610 kB] Get:128 http://deb.debian.org/debian bookworm/main amd64 libbio-coordinate-perl all 1.7.1-4 [56.7 kB] Get:129 http://deb.debian.org/debian bookworm/main amd64 libcgi-session-perl all 4.48-4 [118 kB] Get:130 http://deb.debian.org/debian bookworm/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get:131 http://deb.debian.org/debian bookworm/main amd64 libexporter-tiny-perl all 1.006000-1 [38.6 kB] Get:132 http://deb.debian.org/debian bookworm/main amd64 liblist-moreutils-xs-perl amd64 0.430-3+b1 [42.1 kB] Get:133 http://deb.debian.org/debian bookworm/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:134 http://deb.debian.org/debian bookworm/main amd64 libstatistics-descriptive-perl all 3.0800-1 [65.6 kB] Get:135 http://deb.debian.org/debian bookworm/main amd64 libhttp-daemon-perl all 6.16-1 [23.5 kB] Get:136 http://deb.debian.org/debian bookworm/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:137 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:138 http://deb.debian.org/debian bookworm/main amd64 sqlite3 amd64 3.40.1-2 [353 kB] Get:139 http://deb.debian.org/debian bookworm/main amd64 libjs-prototype all 1.7.3-1 [44.3 kB] Get:140 http://deb.debian.org/debian bookworm/main amd64 libjs-scriptaculous all 1.9.0-3 [110 kB] Get:141 http://deb.debian.org/debian bookworm/main amd64 libanyevent-perl amd64 7.170-2+b3 [394 kB] Get:142 http://deb.debian.org/debian bookworm/main amd64 libanyevent-cachedns-perl all 0.08-3 [7708 B] Get:143 http://deb.debian.org/debian bookworm/main amd64 libcommon-sense-perl amd64 3.75-3 [23.0 kB] Get:144 http://deb.debian.org/debian bookworm/main amd64 libanyevent-http-perl all 2.25-2 [35.2 kB] Get:145 http://deb.debian.org/debian bookworm/main amd64 libstring-approx-perl amd64 3.28-2+b1 [38.9 kB] Get:146 http://deb.debian.org/debian bookworm/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:147 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:148 http://deb.debian.org/debian bookworm/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:149 http://deb.debian.org/debian bookworm/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:150 http://deb.debian.org/debian bookworm/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:151 http://deb.debian.org/debian bookworm/main amd64 libvm-ec2-perl all 1.28-4 [760 kB] Get:152 http://deb.debian.org/debian bookworm/main amd64 gbrowse all 2.56+dfsg-11 [2375 kB] Get:153 http://deb.debian.org/debian bookworm/main amd64 gbrowse-calign amd64 2.56+dfsg-11+b1 [35.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 54.3 MB in 1s (81.0 MB/s) Selecting previously unselected package perl-modules-5.36. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6093 files and directories currently installed.) Preparing to unpack .../000-perl-modules-5.36_5.36.0-7+deb12u1_all.deb ... Unpacking perl-modules-5.36 (5.36.0-7+deb12u1) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../001-libgdbm6_1.23-3_amd64.deb ... Unpacking libgdbm6:amd64 (1.23-3) ... Selecting previously unselected package libgdbm-compat4:amd64. Preparing to unpack .../002-libgdbm-compat4_1.23-3_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.23-3) ... Selecting previously unselected package libperl5.36:amd64. Preparing to unpack .../003-libperl5.36_5.36.0-7+deb12u1_amd64.deb ... Unpacking libperl5.36:amd64 (5.36.0-7+deb12u1) ... Selecting previously unselected package perl. Preparing to unpack .../004-perl_5.36.0-7+deb12u1_amd64.deb ... Unpacking perl (5.36.0-7+deb12u1) ... Selecting previously unselected package libapr1:amd64. Preparing to unpack .../005-libapr1_1.7.2-3_amd64.deb ... Unpacking libapr1:amd64 (1.7.2-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../006-libexpat1_2.5.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-1) ... Selecting previously unselected package libssl3:amd64. Preparing to unpack .../007-libssl3_3.0.14-1~deb12u1_amd64.deb ... Unpacking libssl3:amd64 (3.0.14-1~deb12u1) ... Selecting previously unselected package libaprutil1:amd64. Preparing to unpack .../008-libaprutil1_1.6.3-1_amd64.deb ... Unpacking libaprutil1:amd64 (1.6.3-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../009-libsqlite3-0_3.40.1-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.40.1-2) ... Selecting previously unselected package libaprutil1-dbd-sqlite3:amd64. Preparing to unpack .../010-libaprutil1-dbd-sqlite3_1.6.3-1_amd64.deb ... Unpacking libaprutil1-dbd-sqlite3:amd64 (1.6.3-1) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../011-libsasl2-modules-db_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../012-libsasl2-2_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../013-libldap-2.5-0_2.5.13+dfsg-5_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Selecting previously unselected package libaprutil1-ldap:amd64. Preparing to unpack .../014-libaprutil1-ldap_1.6.3-1_amd64.deb ... Unpacking libaprutil1-ldap:amd64 (1.6.3-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../015-libbrotli1_1.0.9-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b6) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../016-libkrb5support0_1.20.1-2+deb12u2_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-2+deb12u2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../017-libk5crypto3_1.20.1-2+deb12u2_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-2+deb12u2) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../018-libkeyutils1_1.6.3-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-2) ... Selecting previously unselected package libkrb5-3:amd64. 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Unpacking libssh2-1:amd64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../025-libcurl4_7.88.1-10+deb12u7_amd64.deb ... Unpacking libcurl4:amd64 (7.88.1-10+deb12u7) ... Selecting previously unselected package libjansson4:amd64. Preparing to unpack .../026-libjansson4_2.14-2_amd64.deb ... Unpacking libjansson4:amd64 (2.14-2) ... Selecting previously unselected package liblua5.3-0:amd64. Preparing to unpack .../027-liblua5.3-0_5.3.6-2_amd64.deb ... Unpacking liblua5.3-0:amd64 (5.3.6-2) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../028-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../029-libxml2_2.9.14+dfsg-1.3~deb12u1_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... Selecting previously unselected package apache2-bin. Preparing to unpack .../030-apache2-bin_2.4.62-1~deb12u1_amd64.deb ... Unpacking apache2-bin (2.4.62-1~deb12u1) ... Selecting previously unselected package apache2-data. Preparing to unpack .../031-apache2-data_2.4.62-1~deb12u1_all.deb ... Unpacking apache2-data (2.4.62-1~deb12u1) ... Selecting previously unselected package apache2-utils. Preparing to unpack .../032-apache2-utils_2.4.62-1~deb12u1_amd64.deb ... Unpacking apache2-utils (2.4.62-1~deb12u1) ... Selecting previously unselected package media-types. Preparing to unpack .../033-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../034-libncursesw6_6.4-4_amd64.deb ... Unpacking libncursesw6:amd64 (6.4-4) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../035-libproc2-0_2%3a4.0.2-3_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../036-procps_2%3a4.0.2-3_amd64.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package apache2. Preparing to unpack .../037-apache2_2.4.62-1~deb12u1_amd64.deb ... Unpacking apache2 (2.4.62-1~deb12u1) ... Selecting previously unselected package netbase. Preparing to unpack .../038-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../039-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../040-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package openssl. Preparing to unpack .../041-openssl_3.0.14-1~deb12u1_amd64.deb ... Unpacking openssl (3.0.14-1~deb12u1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../042-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package ucf. Preparing to unpack .../043-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../044-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libdata-stag-perl. Preparing to unpack .../045-libdata-stag-perl_0.14-3_all.deb ... Unpacking libdata-stag-perl (0.14-3) ... Selecting previously unselected package libbio-perl-perl. Preparing to unpack .../046-libbio-perl-perl_1.7.8-1_all.deb ... Unpacking libbio-perl-perl (1.7.8-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../047-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../048-libdevel-stacktrace-perl_2.0400-2_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-2) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../049-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libtest-deep-perl. Preparing to unpack .../050-libtest-deep-perl_1.204-1_all.deb ... Unpacking libtest-deep-perl (1.204-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../051-libcapture-tiny-perl_0.48-2_all.deb ... Unpacking libcapture-tiny-perl (0.48-2) ... Selecting previously unselected package libalgorithm-diff-perl. Preparing to unpack .../052-libalgorithm-diff-perl_1.201-1_all.deb ... Unpacking libalgorithm-diff-perl (1.201-1) ... Selecting previously unselected package libtext-diff-perl. Preparing to unpack .../053-libtext-diff-perl_1.45-2_all.deb ... Unpacking libtext-diff-perl (1.45-2) ... Selecting previously unselected package libtest-differences-perl. Preparing to unpack .../054-libtest-differences-perl_0.69-1_all.deb ... Unpacking libtest-differences-perl (0.69-1) ... Selecting previously unselected package libsub-uplevel-perl. Preparing to unpack .../055-libsub-uplevel-perl_0.2800-3_all.deb ... Unpacking libsub-uplevel-perl (0.2800-3) ... Selecting previously unselected package libtest-exception-perl. Preparing to unpack .../056-libtest-exception-perl_0.43-3_all.deb ... Unpacking libtest-exception-perl (0.43-3) ... Selecting previously unselected package libtest-warn-perl. Preparing to unpack .../057-libtest-warn-perl_0.37-2_all.deb ... Unpacking libtest-warn-perl (0.37-2) ... Selecting previously unselected package libtest-most-perl. Preparing to unpack .../058-libtest-most-perl_0.38-1_all.deb ... Unpacking libtest-most-perl (0.38-1) ... Selecting previously unselected package bioperl. Preparing to unpack .../059-bioperl_1.7.8-1_all.deb ... Unpacking bioperl (1.7.8-1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../060-fonts-dejavu-core_2.37-6_all.deb ... Unpacking fonts-dejavu-core (2.37-6) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../061-fontconfig-config_2.14.1-4_amd64.deb ... Unpacking fontconfig-config (2.14.1-4) ... Selecting previously unselected package libaom3:amd64. Preparing to unpack .../062-libaom3_3.6.0-1+deb12u1_amd64.deb ... Unpacking libaom3:amd64 (3.6.0-1+deb12u1) ... Selecting previously unselected package libdav1d6:amd64. Preparing to unpack .../063-libdav1d6_1.0.0-2+deb12u1_amd64.deb ... Unpacking libdav1d6:amd64 (1.0.0-2+deb12u1) ... Selecting previously unselected package libabsl20220623:amd64. Preparing to unpack .../064-libabsl20220623_20220623.1-1_amd64.deb ... Unpacking libabsl20220623:amd64 (20220623.1-1) ... Selecting previously unselected package libgav1-1:amd64. Preparing to unpack .../065-libgav1-1_0.18.0-1+b1_amd64.deb ... Unpacking libgav1-1:amd64 (0.18.0-1+b1) ... Selecting previously unselected package librav1e0:amd64. Preparing to unpack .../066-librav1e0_0.5.1-6_amd64.deb ... Unpacking librav1e0:amd64 (0.5.1-6) ... Selecting previously unselected package libsvtav1enc1:amd64. Preparing to unpack .../067-libsvtav1enc1_1.4.1+dfsg-1_amd64.deb ... Unpacking libsvtav1enc1:amd64 (1.4.1+dfsg-1) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../068-libjpeg62-turbo_1%3a2.1.5-2_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-2) ... Selecting previously unselected package libyuv0:amd64. Preparing to unpack .../069-libyuv0_0.0~git20230123.b2528b0-1_amd64.deb ... Unpacking libyuv0:amd64 (0.0~git20230123.b2528b0-1) ... Selecting previously unselected package libavif15:amd64. Preparing to unpack .../070-libavif15_0.11.1-1_amd64.deb ... Unpacking libavif15:amd64 (0.11.1-1) ... 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Setting up libxpm4:amd64 (1:3.5.12-1.1+deb12u1) ... Setting up libheif1:amd64 (1.15.1-1) ... Setting up libpq5:amd64 (15.8-0+deb12u1) ... Setting up libaprutil1-ldap:amd64 (1.6.3-1) ... Setting up perl (5.36.0-7+deb12u1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libgd3:amd64 (2.3.3-9) ... Setting up libio-html-perl (1.004-3) ... Setting up liblist-moreutils-xs-perl (0.430-3+b1) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libjson-perl (4.10000-1) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libdevel-symdump-perl (2.18-5) ... Setting up libexporter-tiny-perl (1.006000-1) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up liburi-perl (5.17-1) ... Setting up libdbi-perl:amd64 (1.643-4) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libanyevent-perl (7.170-2+b3) ... Setting up libstring-approx-perl (3.28-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libtest-deep-perl (1.204-1) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up libcommon-sense-perl:amd64 (3.75-3) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libnet-http-perl (6.22-1) ... Setting up libanyevent-http-perl (2.25-2) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libdbd-pg-perl (3.16.0-2) ... Setting up libexception-class-perl (1.45-1) ... Setting up apache2-bin (2.4.62-1~deb12u1) ... Setting up libgd-perl (2.76-4+b1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libtest-exception-perl (0.43-3) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libanyevent-cachedns-perl (0.08-3) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up libdbd-sqlite3-perl:amd64 (1.72-1) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up libio-socket-ssl-perl (2.081-2) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libstatistics-descriptive-perl (3.0800-1) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up apache2 (2.4.62-1~deb12u1) ... Enabling module mpm_event. Enabling module authz_core. Enabling module authz_host. Enabling module authn_core. Enabling module auth_basic. Enabling module access_compat. Enabling module authn_file. Enabling module authz_user. Enabling module alias. Enabling module dir. Enabling module autoindex. Enabling module env. Enabling module mime. Enabling module negotiation. Enabling module setenvif. Enabling module filter. Enabling module deflate. Enabling module status. Enabling module reqtimeout. Enabling conf charset. Enabling conf localized-error-pages. Enabling conf other-vhosts-access-log. Enabling conf security. Enabling conf serve-cgi-bin. Enabling site 000-default. invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libcgi-pm-perl (4.55-1) ... Setting up libtest-differences-perl (0.69-1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libcgi-session-perl (4.48-4) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libhttp-daemon-perl (6.16-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up bioperl (1.7.8-1) ... Setting up libbio-coordinate-perl (1.7.1-4) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up libwww-perl (6.68-1) ... Setting up libapache2-mod-perl2 (2.0.12-1+b2) ... apache2_invoke: Enable module perl invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libbio-db-biofetch-perl (1.7.3-4) ... Setting up libvm-ec2-perl (1.28-4) ... Setting up libapache-dbi-perl (1.12-3) ... Setting up libbio-db-gff-perl (1.7.4-1) ... Setting up libbio-db-seqfeature-perl (1.7.4-2) ... Setting up libbio-graphics-perl (2.40-6) ... Setting up gbrowse (2.56+dfsg-11) ... apache2_invoke: Enable configuration gbrowse invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of reload. Setting up gbrowse-calign:amd64 (2.56+dfsg-11+b1) ... Processing triggers for libc-bin (2.36-9+deb12u8) ... Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m22.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-y', 'install', 'gbrowse-calign'] 0m22.7s INFO: Running scripts post_install 0m22.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_install_exceptions'] 0m22.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_install_exceptions'] 0m22.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 0m23.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 0m23.8s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpnqhowlx7 to testing 0m23.8s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m23.8s INFO: Running scripts pre_distupgrade 0m23.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m23.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m23.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_exceptions'] 0m23.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_exceptions'] 0m23.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m23.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m23.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', 'update'] 0m26.4s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [172 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9346 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6242 kB] Fetched 15.8 MB in 2s (8927 kB/s) Reading package lists... 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', 'update'] 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-yf', 'dist-upgrade'] 1m0.3s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libabsl20220623 libavif15 libdav1d6 liblua5.3-0 libnuma1 libperl5.36 librav1e0 libsvtav1enc1 libx265-199 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libapr1 libaprutil1 libapt-pkg6.0 libcurl4 libdb5.3 libext2fs2 libgdbm-compat4 libgdbm6 libgnutls30 libhogweed6 libnettle8 libpng16-16 libpsl5 libreadline8 libssh2-1 libssl3 The following NEW packages will be installed: fonts-dejavu-mono gcc-14-base libabsl20230802 libapr1t64 libaprutil1t64 libapt-pkg6.0t64 libatomic1 libavif16 libcurl4t64 libdav1d7 libdb5.3t64 libext2fs2t64 libfribidi0 libgdbm-compat4t64 libgdbm6t64 libglib2.0-0t64 libgnutls30t64 libgomp1 libgraphite2-3 libharfbuzz0b libheif-plugin-dav1d libheif-plugin-libde265 libhogweed6t64 libimagequant0 liblua5.4-0 libnettle8t64 libperl5.40 libpng16-16t64 libpsl5t64 libraqm0 librav1e0.7 libreadline8t64 libsharpyuv0 libssh2-1t64 libssl3t64 libsvtav1enc2 libunistring5 login.defs openssl-provider-legacy perl-modules-5.40 The following packages will be upgraded: adduser apache2 apache2-bin apache2-data apache2-utils apt base-files base-passwd bash bsdutils ca-certificates coreutils dash debconf debian-archive-keyring debianutils diffutils dpkg e2fsprogs findutils fontconfig-config fonts-dejavu-core gbrowse gbrowse-calign gcc-12-base gpgv grep gzip hostname init-system-helpers libacl1 libanyevent-perl libaom3 libapache2-mod-perl2 libaprutil1-dbd-sqlite3 libaprutil1-ldap libattr1 libaudit-common libaudit1 libbio-db-seqfeature-perl libblkid1 libbrotli1 libbsd0 libbz2-1.0 libc-bin libc6 libcap-ng0 libcap2 libcgi-pm-perl libclone-perl libcom-err2 libcommon-sense-perl libcrypt1 libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libde265-0 libdebconfclient0 libdeflate0 libdevel-stacktrace-perl libexpat1 libexporter-tiny-perl libffi8 libfile-listing-perl libfontconfig1 libfreetype6 libgav1-1 libgcc-s1 libgcrypt20 libgd-perl libgd3 libgmp10 libgpg-error0 libgssapi-krb5-2 libheif1 libhtml-parser-perl libhtml-tagset-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libicu72 libidn2-0 libio-socket-ssl-perl libjansson4 libjbig0 libjpeg62-turbo libjs-scriptaculous libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblerc4 liblist-moreutils-xs-perl liblua5.3-0 liblwp-protocol-https-perl liblz4-1 liblzma5 libmd0 libmount1 libncursesw6 libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnuma1 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libpq5 libproc2-0 librtmp1 libsasl2-2 libsasl2-modules-db libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsmartcols1 libsqlite3-0 libss2 libstatistics-descriptive-perl libstdc++6 libstring-approx-perl libsystemd0 libtasn1-6 libterm-readkey-perl libtest-differences-perl libtiff6 libtinfo6 libtry-tiny-perl libudev1 liburi-perl libuuid1 libvm-ec2-perl libwebp7 libwww-perl libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxml-libxml-perl libxml2 libxpm4 libxxhash0 libyuv0 libzstd1 login logsave mawk media-types mount ncurses-base ncurses-bin openssl passwd perl perl-base perl-openssl-defaults procps readline-common sed sensible-utils sqlite3 sysvinit-utils tar tzdata usr-is-merged util-linux util-linux-extra zlib1g 175 upgraded, 40 newly installed, 16 to remove and 0 not upgraded. Need to get 84.9 MB of archives. After this operation, 82.8 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 base-files amd64 13.5 [72.8 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libc6 amd64 2.40-3 [2807 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libc-bin amd64 2.40-3 [627 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 gcc-14-base amd64 14.2.0-6 [46.7 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libgcc-s1 amd64 14.2.0-6 [72.8 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 debianutils amd64 5.20 [89.5 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 bash amd64 5.2.32-1+b2 [1500 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libcap2 amd64 1:2.66-5 [27.4 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libsystemd0 amd64 256.7-2 [382 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.2-9 [105 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libgmp10 amd64 2:6.3.0+dfsg-2+b1 [559 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libzstd1 amd64 1.5.6+dfsg-1 [303 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:14 http://deb.debian.org/debian trixie/main amd64 openssl amd64 3.3.2-1 [1381 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.2-1 [425 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.10.1-2 [352 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libidn2-0 amd64 2.3.7-2 [128 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1 [87.9 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB] Get:22 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:28 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libgpg-error0 amd64 1.50-4 [81.6 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 libgcrypt20 amd64 1.11.0-6 [843 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libstdc++6 amd64 14.2.0-6 [715 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 libnettle8t64 amd64 3.10-1 [303 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libhogweed6t64 amd64 3.10-1 [334 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 libp11-kit0 amd64 0.25.5-2 [424 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 libgnutls30t64 amd64 3.8.6-2 [1444 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 libapt-pkg6.0t64 amd64 2.9.8 [1045 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Get:38 http://deb.debian.org/debian trixie/main amd64 libxxhash0 amd64 0.8.2-2+b1 [26.6 kB] Get:39 http://deb.debian.org/debian trixie/main amd64 liblz4-1 amd64 1.9.4-3 [59.4 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 liblzma5 amd64 5.6.2-2 [254 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 libudev1 amd64 256.7-2 [145 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 libdebconfclient0 amd64 0.272 [10.0 kB] Get:43 http://deb.debian.org/debian trixie/main amd64 libpcre2-8-0 amd64 10.42-4+b1 [262 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 libselinux1 amd64 3.7-3 [76.9 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 base-passwd amd64 3.6.5 [53.1 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 login.defs all 1:4.16.0-4 [185 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 liblua5.4-0 amd64 5.4.6-3+b1 [147 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get:50 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-5 [69.3 kB] Get:51 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5-2 [135 kB] Get:52 http://deb.debian.org/debian trixie/main amd64 libtinfo6 amd64 6.5-2 [344 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 sqlite3 amd64 3.46.1-1 [385 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:55 http://deb.debian.org/debian trixie/main amd64 libaprutil1-dbd-sqlite3 amd64 1.6.3-3 [13.9 kB] Get:56 http://deb.debian.org/debian trixie/main amd64 libaprutil1-ldap amd64 1.6.3-3 [12.1 kB] Get:57 http://deb.debian.org/debian trixie/main amd64 libcrypt1 amd64 1:4.4.36-5 [89.8 kB] Get:58 http://deb.debian.org/debian trixie/main amd64 libjansson4 amd64 2.14-2+b2 [39.9 kB] Get:59 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.63.0-1 [74.8 kB] Get:60 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:61 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:62 http://deb.debian.org/debian trixie/main amd64 apache2 amd64 2.4.62-3 [217 kB] Get:63 http://deb.debian.org/debian trixie/main amd64 apache2-bin amd64 2.4.62-3 [1394 kB] Get:64 http://deb.debian.org/debian trixie/main amd64 apache2-data all 2.4.62-3 [160 kB] Get:65 http://deb.debian.org/debian trixie/main amd64 apache2-utils amd64 2.4.62-3 [211 kB] Get:66 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get:67 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get:68 http://deb.debian.org/debian trixie/main amd64 usr-is-merged all 39 [5572 B] Get:69 http://deb.debian.org/debian trixie/main amd64 init-system-helpers all 1.67 [38.7 kB] Get:70 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get:71 http://deb.debian.org/debian trixie/main amd64 libpq5 amd64 17.0-1+b2 [220 kB] Get:72 http://deb.debian.org/debian trixie/main amd64 libdbi-perl amd64 1.645-1+b1 [861 kB] Get:73 http://deb.debian.org/debian trixie/main amd64 libdbd-pg-perl amd64 3.18.0-1+b3 [210 kB] Get:74 http://deb.debian.org/debian trixie/main amd64 libdbd-sqlite3-perl amd64 1.74-1+b3 [175 kB] Get:75 http://deb.debian.org/debian trixie/main amd64 libbio-db-seqfeature-perl all 1.7.5-1 [166 kB] Get:76 http://deb.debian.org/debian trixie/main amd64 libdav1d7 amd64 1.4.3-1 [551 kB] Get:77 http://deb.debian.org/debian trixie/main amd64 librav1e0.7 amd64 0.7.1-7+b2 [936 kB] Get:78 http://deb.debian.org/debian trixie/main amd64 libsvtav1enc2 amd64 2.2.1+dfsg-2 [2173 kB] Get:79 http://deb.debian.org/debian trixie/main amd64 libaom3 amd64 3.10.0-1 [1884 kB] Get:80 http://deb.debian.org/debian trixie/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get:81 http://deb.debian.org/debian trixie/main amd64 libgav1-1 amd64 0.19.0-2+b1 [351 kB] Get:82 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:83 http://deb.debian.org/debian trixie/main amd64 libyuv0 amd64 0.0.1888.20240710-3 [170 kB] Get:84 http://deb.debian.org/debian trixie/main amd64 libavif16 amd64 1.1.1-1 [117 kB] Get:85 http://deb.debian.org/debian trixie/main amd64 libgomp1 amd64 14.2.0-6 [137 kB] Get:86 http://deb.debian.org/debian trixie/main amd64 libimagequant0 amd64 2.18.0-1+b1 [35.3 kB] Get:87 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get:88 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get:89 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get:90 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14.2.0-6 [9284 B] Get:91 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.2-9 [168 kB] Get:92 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.2-9 [199 kB] Get:93 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.6-1 [23.6 kB] Get:94 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.82.1-1 [1499 kB] Get:95 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get:96 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB] Get:97 http://deb.debian.org/debian trixie/main amd64 libraqm0 amd64 0.10.1-1+b1 [14.2 kB] Get:98 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get:99 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get:100 http://deb.debian.org/debian trixie/main amd64 perl amd64 5.40.0-6 [267 kB] Get:101 http://deb.debian.org/debian trixie/main amd64 perl-modules-5.40 all 5.40.0-6 [3022 kB] Get:102 http://deb.debian.org/debian trixie/main amd64 libpam-modules-bin amd64 1.5.3-7 [54.4 kB] Get:103 http://deb.debian.org/debian trixie/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-9 [704 kB] Get:104 http://deb.debian.org/debian trixie/main amd64 libpam-modules amd64 1.5.3-7 [265 kB] Get:105 http://deb.debian.org/debian trixie/main amd64 libapache2-mod-perl2 amd64 2.0.13-2+b1 [808 kB] Get:106 http://deb.debian.org/debian trixie/main amd64 libapr1t64 amd64 1.7.5-1 [104 kB] Get:107 http://deb.debian.org/debian trixie/main amd64 libgdbm-compat4t64 amd64 1.24-2 [50.3 kB] Get:108 http://deb.debian.org/debian trixie/main amd64 libgdbm6t64 amd64 1.24-2 [75.2 kB] Get:109 http://deb.debian.org/debian trixie/main amd64 libnet-ssleay-perl amd64 1.94-2 [339 kB] Get:110 http://deb.debian.org/debian trixie/main amd64 openssl-provider-legacy amd64 3.3.2-1 [298 kB] Get:111 http://deb.debian.org/debian trixie/main amd64 libssl3t64 amd64 3.3.2-1 [2271 kB] Get:112 http://deb.debian.org/debian trixie/main amd64 libaprutil1t64 amd64 1.6.3-3 [89.3 kB] Get:113 http://deb.debian.org/debian trixie/main amd64 libperl5.40 amd64 5.40.0-6 [4326 kB] Get:114 http://deb.debian.org/debian trixie/main amd64 libcommon-sense-perl amd64 3.75-3+b3 [22.9 kB] Get:115 http://deb.debian.org/debian trixie/main amd64 gbrowse-calign amd64 2.56+dfsg-12+b3 [34.5 kB] Get:116 http://deb.debian.org/debian trixie/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b1 [314 kB] Get:117 http://deb.debian.org/debian trixie/main amd64 libterm-readkey-perl amd64 2.38-2+b4 [24.6 kB] Get:118 http://deb.debian.org/debian trixie/main amd64 libstring-approx-perl amd64 3.28-2+b4 [39.1 kB] Get:119 http://deb.debian.org/debian trixie/main amd64 liblist-moreutils-xs-perl amd64 0.430-4+b2 [42.1 kB] Get:120 http://deb.debian.org/debian trixie/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get:121 http://deb.debian.org/debian trixie/main amd64 libgd-perl amd64 2.78-1+b3 [131 kB] Get:122 http://deb.debian.org/debian trixie/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get:123 http://deb.debian.org/debian trixie/main amd64 libanyevent-perl amd64 7.170-2+b6 [384 kB] Get:124 http://deb.debian.org/debian trixie/main amd64 perl-base amd64 5.40.0-6 [1675 kB] Get:125 http://deb.debian.org/debian trixie/main amd64 debconf all 1.5.87 [119 kB] Get:126 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:127 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:128 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get:129 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.3-1 [105 kB] Get:130 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get:131 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-dav1d amd64 1.18.2-2 [10.9 kB] Get:132 http://deb.debian.org/debian trixie/main amd64 libde265-0 amd64 1.0.15-1+b2 [189 kB] Get:133 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-libde265 amd64 1.18.2-2 [14.2 kB] Get:134 http://deb.debian.org/debian trixie/main amd64 libheif1 amd64 1.18.2-2 [312 kB] Get:135 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get:136 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get:137 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get:138 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:139 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:140 http://deb.debian.org/debian trixie/main amd64 libmd0 amd64 1.1.0-2 [35.8 kB] Get:141 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6.16-1 [12.4 kB] Get:152 http://deb.debian.org/debian trixie/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:153 http://deb.debian.org/debian trixie/main amd64 liburi-perl all 5.30-1 [105 kB] Get:154 http://deb.debian.org/debian trixie/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:155 http://deb.debian.org/debian trixie/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:156 http://deb.debian.org/debian trixie/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:157 http://deb.debian.org/debian trixie/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:158 http://deb.debian.org/debian trixie/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:159 http://deb.debian.org/debian trixie/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:160 http://deb.debian.org/debian trixie/main amd64 libwww-perl all 6.77-1 [183 kB] Get:161 http://deb.debian.org/debian trixie/main amd64 libjs-scriptaculous all 1.9.0-4 [110 kB] Get:162 http://deb.debian.org/debian 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[329 kB] Get:196 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.2-9 [139 kB] Get:197 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.2-9 [1216 kB] Get:198 http://deb.debian.org/debian trixie/main amd64 util-linux-extra amd64 2.40.2-9 [265 kB] Get:199 http://deb.debian.org/debian trixie/main amd64 ncurses-base all 6.5-2 [270 kB] Get:200 http://deb.debian.org/debian trixie/main amd64 sysvinit-utils amd64 3.10-3 [33.0 kB] Get:201 http://deb.debian.org/debian trixie/main amd64 logsave amd64 1.47.1-1 [22.7 kB] Get:202 http://deb.debian.org/debian trixie/main amd64 libext2fs2t64 amd64 1.47.1-1 [210 kB] Get:203 http://deb.debian.org/debian trixie/main amd64 e2fsprogs amd64 1.47.1-1 [583 kB] Get:204 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.2-9 [154 kB] Get:205 http://deb.debian.org/debian trixie/main amd64 mawk amd64 1.3.4.20240905-1 [138 kB] Get:206 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024a-4 [255 kB] Get:207 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:208 http://deb.debian.org/debian trixie/main amd64 gcc-12-base amd64 12.4.0-2 [42.9 kB] Get:209 http://deb.debian.org/debian trixie/main amd64 libcgi-pm-perl all 4.66-1 [217 kB] Get:210 http://deb.debian.org/debian trixie/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:211 http://deb.debian.org/debian trixie/main amd64 libexporter-tiny-perl all 1.006002-1 [38.7 kB] Get:212 http://deb.debian.org/debian trixie/main amd64 liblua5.3-0 amd64 5.3.6-2+b2 [129 kB] Get:213 http://deb.debian.org/debian trixie/main amd64 libnuma1 amd64 2.0.18-1 [21.9 kB] Get:214 http://deb.debian.org/debian trixie/main amd64 libss2 amd64 1.47.1-1 [27.6 kB] Get:215 http://deb.debian.org/debian trixie/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 84.9 MB in 1s (105 MB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15202 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.2-9_amd64.deb ... Unpacking bsdutils (1:2.40.2-9) over (1:2.38.1-5+deb12u1) ... Setting up bsdutils (1:2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15203 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.3.0+dfsg-2+b1_amd64.deb ... Unpacking libgmp10:amd64 (2:6.3.0+dfsg-2+b1) over (2:6.2.1+dfsg1-1.1) ... Setting up libgmp10:amd64 (2:6.3.0+dfsg-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15204 files and directories currently installed.) Preparing to unpack .../libzstd1_1.5.6+dfsg-1_amd64.deb ... Unpacking libzstd1:amd64 (1.5.6+dfsg-1) over (1.5.4+dfsg2-5) ... Setting up libzstd1:amd64 (1.5.6+dfsg-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15204 files and directories currently installed.) Preparing to unpack .../perl-openssl-defaults_7+b2_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (7+b2) over (7+b1) ... Preparing to unpack .../openssl_3.3.2-1_amd64.deb ... Unpacking openssl (3.3.2-1) over (3.0.14-1~deb12u1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../libunistring5_1.2-1_amd64.deb ... Unpacking libunistring5:amd64 (1.2-1) ... Setting up libunistring5:amd64 (1.2-1) ... dpkg: libcurl4:amd64: dependency problems, but removing anyway as you requested: apache2-bin depends on libcurl4 (>= 7.28.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15233 files and directories currently installed.) Removing libcurl4:amd64 (7.88.1-10+deb12u7) ... Selecting previously unselected package libcurl4t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15227 files and directories currently installed.) Preparing to unpack .../libcurl4t64_8.10.1-2_amd64.deb ... Unpacking libcurl4t64:amd64 (8.10.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15233 files and directories currently installed.) Removing libpsl5:amd64 (0.21.2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15227 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.7-2_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.7-2) over (2.3.3-1+b1) ... Setting up libidn2-0:amd64 (2.3.7-2) ... Selecting previously unselected package libpsl5t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15227 files and directories currently installed.) Preparing to unpack .../libpsl5t64_0.21.2-1.1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1) ... Preparing to unpack .../zlib1g_1%3a1.3.dfsg+really1.3.1-1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1) over (1:1.2.13.dfsg-1) ... Setting up zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15234 files and directories currently installed.) Removing libssh2-1:amd64 (1.10.0-3+b1) ... Selecting previously unselected package libssh2-1t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15225 files and directories currently installed.) Preparing to unpack .../0-libssh2-1t64_1.11.1-1_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.1-1) ... Preparing to unpack .../1-libbrotli1_1.1.0-2+b4_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b4) over (1.0.9-2+b6) ... Preparing to unpack .../2-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... Preparing to unpack .../3-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... Preparing to unpack .../4-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... Preparing to unpack .../5-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... Preparing to unpack .../6-libcom-err2_1.47.1-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1) over (1.47.0-2) ... Preparing to unpack .../7-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) over (1.6.3-2) ... Preparing to unpack .../8-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) over (2.4+20151223.gitfa8646d.1-2+b2) ... Preparing to unpack .../9-libgpg-error0_1.50-4_amd64.deb ... Unpacking libgpg-error0:amd64 (1.50-4) over (1.46-1) ... Setting up libgpg-error0:amd64 (1.50-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15235 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.11.0-6_amd64.deb ... Unpacking libgcrypt20:amd64 (1.11.0-6) over (1.10.1-3) ... Setting up libgcrypt20:amd64 (1.11.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15235 files and directories currently installed.) Preparing to unpack .../libstdc++6_14.2.0-6_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-6) over (12.2.0-14) ... Setting up libstdc++6:amd64 (14.2.0-6) ... dpkg: libnettle8:amd64: dependency problems, but removing anyway as you requested: libhogweed6:amd64 depends on libnettle8. libgnutls30:amd64 depends on libnettle8 (>= 3.7~). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15235 files and directories currently installed.) Removing libnettle8:amd64 (3.8.1-2) ... Selecting previously unselected package libnettle8t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15227 files and directories currently installed.) Preparing to unpack .../libnettle8t64_3.10-1_amd64.deb ... Unpacking libnettle8t64:amd64 (3.10-1) ... Setting up libnettle8t64:amd64 (3.10-1) ... dpkg: libhogweed6:amd64: dependency problems, but removing anyway as you requested: libgnutls30:amd64 depends on libhogweed6 (>= 3.6). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15236 files and directories currently installed.) Removing libhogweed6:amd64 (3.8.1-2) ... Selecting previously unselected package libhogweed6t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15230 files and directories currently installed.) Preparing to unpack .../libhogweed6t64_3.10-1_amd64.deb ... Unpacking libhogweed6t64:amd64 (3.10-1) ... Setting up libhogweed6t64:amd64 (3.10-1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15237 files and directories currently installed.) Removing libgnutls30:amd64 (3.7.9-2+deb12u3) ... Selecting previously unselected package libgnutls30t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15208 files and directories currently installed.) Preparing to unpack .../libgnutls30t64_3.8.6-2_amd64.deb ... Unpacking libgnutls30t64:amd64 (3.8.6-2) ... Setting up libgnutls30t64:amd64 (3.8.6-2) ... dpkg: libapt-pkg6.0:amd64: dependency problems, but removing anyway as you requested: apt depends on libapt-pkg6.0 (>= 2.6.1). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15237 files and directories currently installed.) Removing libapt-pkg6.0:amd64 (2.6.1) ... Selecting previously unselected package libapt-pkg6.0t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15188 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.8_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.8) ... Setting up libapt-pkg6.0t64:amd64 (2.9.8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15238 files and directories currently installed.) Preparing to unpack .../libbz2-1.0_1.0.8-6_amd64.deb ... Unpacking libbz2-1.0:amd64 (1.0.8-6) over (1.0.8-5+b1) ... Setting up libbz2-1.0:amd64 (1.0.8-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15237 files and directories currently installed.) Preparing to unpack .../libxxhash0_0.8.2-2+b1_amd64.deb ... Unpacking libxxhash0:amd64 (0.8.2-2+b1) over (0.8.1-1) ... Setting up libxxhash0:amd64 (0.8.2-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15238 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.9.4-3_amd64.deb ... Unpacking liblz4-1:amd64 (1.9.4-3) over (1.9.4-1) ... Setting up liblz4-1:amd64 (1.9.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15238 files and directories currently installed.) Preparing to unpack .../liblzma5_5.6.2-2_amd64.deb ... Unpacking liblzma5:amd64 (5.6.2-2) over (5.4.1-0.2) ... Setting up liblzma5:amd64 (5.6.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15238 files and directories currently installed.) Preparing to unpack .../libudev1_256.7-2_amd64.deb ... Unpacking libudev1:amd64 (256.7-2) over (252.30-1~deb12u2) ... Setting up libudev1:amd64 (256.7-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15238 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.272_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.272) over (0.270) ... Setting up libdebconfclient0:amd64 (0.272) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15238 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.42-4+b1_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.42-4+b1) over (10.42-1) ... Setting up libpcre2-8-0:amd64 (10.42-4+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15239 files and directories currently installed.) Preparing to unpack .../libselinux1_3.7-3_amd64.deb ... Unpacking libselinux1:amd64 (3.7-3) over (3.4-1+b6) ... Setting up libselinux1:amd64 (3.7-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15239 files and directories currently installed.) Preparing to unpack .../base-passwd_3.6.5_amd64.deb ... Unpacking base-passwd (3.6.5) over (3.6.1) ... Setting up base-passwd (3.6.5) ... Selecting previously unselected package login.defs. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15242 files and directories currently installed.) Preparing to unpack .../login.defs_1%3a4.16.0-4_all.deb ... Unpacking login.defs (1:4.16.0-4) ... Replacing files in old package login (1:4.13+dfsg1-1+b1) ... Setting up login.defs (1:4.16.0-4) ... Installing new version of config file /etc/login.defs ... (Reading database ... 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Unpacking liblua5.4-0:amd64 (5.4.6-3+b1) ... dpkg: libreadline8:amd64: dependency problems, but removing anyway as you requested: sqlite3 depends on libreadline8 (>= 6.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15254 files and directories currently installed.) Removing libreadline8:amd64 (8.2-1.3) ... Selecting previously unselected package libreadline8t64:amd64. (Reading database ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Preparing to unpack .../readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) over (8.2-1.3) ... Preparing to unpack .../libncursesw6_6.5-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.5-2) over (6.4-4) ... Preparing to unpack .../libtinfo6_6.5-2_amd64.deb ... Unpacking libtinfo6:amd64 (6.5-2) over (6.4-4) ... Setting up libtinfo6:amd64 (6.5-2) ... (Reading database ... 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Preparing to unpack .../08-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) over (10.0.0) ... Preparing to unpack .../09-libproc2-0_2%3a4.0.4-6_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-6) over (2:4.0.2-3) ... Preparing to unpack .../10-usr-is-merged_39_all.deb ... Unpacking usr-is-merged (39) over (37~deb12u1) ... Setting up usr-is-merged (39) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15267 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.67_all.deb ... Unpacking init-system-helpers (1.67) over (1.65.2) ... Setting up init-system-helpers (1.67) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15267 files and directories currently installed.) Preparing to unpack .../00-procps_2%3a4.0.4-6_amd64.deb ... Unpacking procps (2:4.0.4-6) over (2:4.0.2-3) ... Removing obsolete conffile /etc/sysctl.conf ... Preparing to unpack .../01-libpq5_17.0-1+b2_amd64.deb ... 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Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../15-libgomp1_14.2.0-6_amd64.deb ... Unpacking libgomp1:amd64 (14.2.0-6) ... Selecting previously unselected package libimagequant0:amd64. Preparing to unpack .../16-libimagequant0_2.18.0-1+b1_amd64.deb ... Unpacking libimagequant0:amd64 (2.18.0-1+b1) ... Preparing to unpack .../17-libfreetype6_2.13.3+dfsg-1_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) over (2.12.1+dfsg-5+deb12u3) ... dpkg: libpng16-16:amd64: dependency problems, but removing anyway as you requested: libgd3:amd64 depends on libpng16-16 (>= 1.6.2-1). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15509 files and directories currently installed.) Removing libpng16-16:amd64 (1.6.39-2) ... Selecting previously unselected package libpng16-16t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15498 files and directories currently installed.) Preparing to unpack .../libpng16-16t64_1.6.44-2_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.44-2) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../libfribidi0_1.0.15-1_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.15-1) ... Selecting previously unselected package libatomic1:amd64. Preparing to unpack .../libatomic1_14.2.0-6_amd64.deb ... Unpacking libatomic1:amd64 (14.2.0-6) ... Preparing to unpack .../libblkid1_2.40.2-9_amd64.deb ... Unpacking libblkid1:amd64 (2.40.2-9) over (2.38.1-5+deb12u1) ... Setting up libblkid1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15524 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.2-9_amd64.deb ... Unpacking libmount1:amd64 (2.40.2-9) over (2.38.1-5+deb12u1) ... Setting up libmount1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15525 files and directories currently installed.) Preparing to unpack .../libffi8_3.4.6-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.6-1) over (3.4.4-1) ... Setting up libffi8:amd64 (3.4.6-1) ... Selecting previously unselected package libglib2.0-0t64:amd64. (Reading database ... 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Unpacking libharfbuzz0b:amd64 (10.0.1-1) ... Selecting previously unselected package libraqm0:amd64. Preparing to unpack .../3-libraqm0_0.10.1-1+b1_amd64.deb ... Unpacking libraqm0:amd64 (0.10.1-1+b1) ... Selecting previously unselected package libsharpyuv0:amd64. Preparing to unpack .../4-libsharpyuv0_1.4.0-0.1_amd64.deb ... Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... Preparing to unpack .../5-libwebp7_1.4.0-0.1_amd64.deb ... Unpacking libwebp7:amd64 (1.4.0-0.1) over (1.2.4-0.2+deb12u1) ... Preparing to unpack .../6-perl_5.40.0-6_amd64.deb ... Unpacking perl (5.40.0-6) over (5.36.0-7+deb12u1) ... Selecting previously unselected package perl-modules-5.40. Preparing to unpack .../7-perl-modules-5.40_5.40.0-6_all.deb ... Unpacking perl-modules-5.40 (5.40.0-6) ... Preparing to unpack .../8-libpam-modules-bin_1.5.3-7_amd64.deb ... Unpacking libpam-modules-bin (1.5.3-7) over (1.5.2-6+deb12u1) ... Setting up libpam-modules-bin (1.5.3-7) ... dpkg: libdb5.3:amd64: dependency problems, but removing anyway as you requested: libperl5.36:amd64 depends on libdb5.3. libpam-modules:amd64 depends on libdb5.3. libaprutil1:amd64 depends on libdb5.3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17136 files and directories currently installed.) Removing libdb5.3:amd64 (5.3.28+dfsg2-1) ... Selecting previously unselected package libdb5.3t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17130 files and directories currently installed.) Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-9_amd64.deb ... Unpacking libdb5.3t64:amd64 (5.3.28+dfsg2-9) ... Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17136 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.5.3-7_amd64.deb ... Unpacking libpam-modules:amd64 (1.5.3-7) over (1.5.2-6+deb12u1) ... dpkg: warning: unable to delete old directory '/lib/x86_64-linux-gnu/security': Directory not empty Setting up libpam-modules:amd64 (1.5.3-7) ... Installing new version of config file /etc/security/namespace.init ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17136 files and directories currently installed.) Preparing to unpack .../libapache2-mod-perl2_2.0.13-2+b1_amd64.deb ... Unpacking libapache2-mod-perl2 (2.0.13-2+b1) over (2.0.12-1+b2) ... dpkg: libapr1:amd64: dependency problems, but removing anyway as you requested: libaprutil1:amd64 depends on libapr1 (>= 1.6.2). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17135 files and directories currently installed.) Removing libapr1:amd64 (1.7.2-3) ... Selecting previously unselected package libapr1t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17127 files and directories currently installed.) Preparing to unpack .../libapr1t64_1.7.5-1_amd64.deb ... Unpacking libapr1t64:amd64 (1.7.5-1) ... dpkg: libgdbm-compat4:amd64: dependency problems, but removing anyway as you requested: libperl5.36:amd64 depends on libgdbm-compat4 (>= 1.18-3). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17135 files and directories currently installed.) Removing libgdbm-compat4:amd64 (1.23-3) ... Selecting previously unselected package libgdbm-compat4t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17129 files and directories currently installed.) Preparing to unpack .../libgdbm-compat4t64_1.24-2_amd64.deb ... Unpacking libgdbm-compat4t64:amd64 (1.24-2) ... dpkg: libgdbm6:amd64: dependency problems, but removing anyway as you requested: libperl5.36:amd64 depends on libgdbm6 (>= 1.21). libaprutil1:amd64 depends on libgdbm6 (>= 1.16). (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17696 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.8_amd64.deb ... Unpacking apt (2.9.8) over (2.6.1) ... Setting up apt (2.9.8) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17693 files and directories currently installed.) Preparing to unpack .../libsasl2-2_2.1.28+dfsg1-8_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-8) over (2.1.28+dfsg-10) ... Preparing to unpack .../libldap-2.5-0_2.5.18+dfsg-3+b1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) over (2.5.13+dfsg-5) ... Preparing to unpack .../coreutils_9.4-3.1_amd64.deb ... Unpacking coreutils (9.4-3.1) over (9.1-1) ... Setting up coreutils (9.4-3.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17698 files and directories currently installed.) Preparing to unpack .../dash_0.5.12-9_amd64.deb ... Unpacking dash (0.5.12-9) over (0.5.12-2) ... Setting up dash (0.5.12-9) ... Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17698 files and directories currently installed.) Preparing to unpack .../dpkg_1.22.11_amd64.deb ... Unpacking dpkg (1.22.11) over (1.21.22) ... Setting up dpkg (1.22.11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17685 files and directories currently installed.) Preparing to unpack .../findutils_4.10.0-3_amd64.deb ... Unpacking findutils (4.10.0-3) over (4.9.0-4) ... Setting up findutils (4.10.0-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17683 files and directories currently installed.) Preparing to unpack .../archives/grep_3.11-4_amd64.deb ... Unpacking grep (3.11-4) over (3.8-5) ... Setting up grep (3.11-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17683 files and directories currently installed.) Preparing to unpack .../gzip_1.12-1.1_amd64.deb ... Unpacking gzip (1.12-1.1) over (1.12-1) ... dpkg: warning: old file '/bin/uncompress' is the same as several new files! (both '/usr/bin/gunzip' and '/usr/bin/uncompress') dpkg: warning: old file '/bin/gunzip' is the same as several new files! (both '/usr/bin/gunzip' and '/usr/bin/uncompress') Setting up gzip (1.12-1.1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17683 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.5.3-7_all.deb ... Unpacking libpam-runtime (1.5.3-7) over (1.5.2-6+deb12u1) ... Setting up libpam-runtime (1.5.3-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17682 files and directories currently installed.) Preparing to unpack .../login_1%3a4.16.0-2+really2.40.2-9_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.2-9) over (1:4.13+dfsg1-1+b1) ... Setting up login (1:4.16.0-2+really2.40.2-9) ... Installing new version of config file /etc/pam.d/login ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17609 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.5-2_amd64.deb ... Unpacking ncurses-bin (6.5-2) over (6.4-4) ... Setting up ncurses-bin (6.5-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17609 files and directories currently installed.) Preparing to unpack .../archives/sed_4.9-2_amd64.deb ... Unpacking sed (4.9-2) over (4.9-1) ... Setting up sed (4.9-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17609 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.2-9_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.2-9) over (2.38.1-5+deb12u1) ... Setting up libsmartcols1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17610 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.2-9_amd64.deb ... Unpacking util-linux (2.40.2-9) over (2.38.1-5+deb12u1) ... Setting up util-linux (2.40.2-9) ... (Reading database ... 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Adding 'diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra' Unpacking util-linux-extra (2.40.2-9) over (2.38.1-5+deb12u1) ... dpkg: warning: unable to delete old directory '/usr/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/usr/lib/udev': Directory not empty Setting up util-linux-extra (2.40.2-9) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17621 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.10-3_amd64.deb ... Unpacking sysvinit-utils (3.10-3) over (3.06-4) ... dpkg: warning: unable to delete old directory '/lib/lsb/init-functions.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/lsb': Directory not empty dpkg: warning: unable to delete old directory '/lib/init': Directory not empty Setting up sysvinit-utils (3.10-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17621 files and directories currently installed.) Preparing to unpack .../logsave_1.47.1-1_amd64.deb ... Unpacking logsave (1.47.1-1) over (1.47.0-2) ... dpkg: libext2fs2:amd64: dependency problems, but removing anyway as you requested: e2fsprogs depends on libext2fs2 (= 1.47.0-2). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17621 files and directories currently installed.) Removing libext2fs2:amd64 (1.47.0-2) ... Selecting previously unselected package libext2fs2t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17614 files and directories currently installed.) Preparing to unpack .../libext2fs2t64_1.47.1-1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.1-1) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up libext2fs2t64:amd64 (1.47.1-1) ... (Reading database ... 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Unpacking e2fsprogs (1.47.1-1) over (1.47.0-2) ... dpkg: warning: unable to delete old directory '/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/udev': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd': Directory not empty Preparing to unpack .../01-mount_2.40.2-9_amd64.deb ... Unpacking mount (2.40.2-9) over (2.38.1-5+deb12u1) ... Preparing to unpack .../02-mawk_1.3.4.20240905-1_amd64.deb ... Unpacking mawk (1.3.4.20240905-1) over (1.3.4.20200120-3.1) ... Preparing to unpack .../03-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) over (2024a-0+deb12u1) ... Preparing to unpack .../04-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) over (0.0.17+nmu1) ... Preparing to unpack .../05-gcc-12-base_12.4.0-2_amd64.deb ... Unpacking gcc-12-base:amd64 (12.4.0-2) over (12.2.0-14) ... Preparing to unpack .../06-libcgi-pm-perl_4.66-1_all.deb ... Unpacking libcgi-pm-perl (4.66-1) over (4.55-1) ... Preparing to unpack .../07-libdevel-stacktrace-perl_2.0500-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0500-1) over (2.0400-2) ... Preparing to unpack .../08-libexporter-tiny-perl_1.006002-1_all.deb ... Unpacking libexporter-tiny-perl (1.006002-1) over (1.006000-1) ... Preparing to unpack .../09-liblua5.3-0_5.3.6-2+b2_amd64.deb ... Unpacking liblua5.3-0:amd64 (5.3.6-2+b2) over (5.3.6-2) ... Preparing to unpack .../10-libnuma1_2.0.18-1_amd64.deb ... Unpacking libnuma1:amd64 (2.0.18-1) over (2.0.16-1) ... Preparing to unpack .../11-libss2_1.47.1-1_amd64.deb ... Unpacking libss2:amd64 (1.47.1-1) over (1.47.0-2) ... dpkg: warning: unable to delete old directory '/lib/x86_64-linux-gnu': Directory not empty Preparing to unpack .../12-libtest-differences-perl_0.71-1_all.deb ... Unpacking libtest-differences-perl (0.71-1) over (0.69-1) ... Setting up libexpat1:amd64 (2.6.3-1) ... Setting up media-types (10.1.0) ... Installing new version of config file /etc/mime.types ... Setting up libgraphite2-3:amd64 (1.3.14-2) ... Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... Setting up libaom3:amd64 (3.10.0-1) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up libkeyutils1:amd64 (1.6.3-4) ... Setting up libxcb1:amd64 (1.17.0-2) ... Setting up libicu72:amd64 (72.1-5) ... Setting up liblerc4:amd64 (4.0.0+ds-4+b1) ... Setting up libgdbm6t64:amd64 (1.24-2) ... Setting up libgdbm-compat4t64:amd64 (1.24-2) ... Setting up libjs-scriptaculous (1.9.0-4) ... Setting up libbrotli1:amd64 (1.1.0-2+b4) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.63.0-1) ... Setting up libdeflate0:amd64 (1.22-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up libgomp1:amd64 (14.2.0-6) ... Setting up libjbig0:amd64 (2.1-6.1+b1) ... Setting up libjansson4:amd64 (2.14-2+b2) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up gcc-12-base:amd64 (12.4.0-2) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Oct 27 04:43:41 UTC 2024. Universal Time is now: Sun Oct 27 04:43:41 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libjpeg62-turbo:amd64 (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libsvtav1enc2:amd64 (2.2.1+dfsg-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libfribidi0:amd64 (1.0.15-1) ... Setting up libimagequant0:amd64 (2.18.0-1+b1) ... Setting up libproc2-0:amd64 (2:4.0.4-6) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.44-2) ... Setting up libatomic1:amd64 (14.2.0-6) ... Setting up libss2:amd64 (1.47.1-1) ... Setting up fonts-dejavu-core (2.37-8) ... Removing obsolete conffile /etc/fonts/conf.avail/20-unhint-small-dejavu-lgc-sans-mono.conf ... Removing obsolete conffile /etc/fonts/conf.avail/20-unhint-small-dejavu-sans-mono.conf ... Removing obsolete conffile /etc/fonts/conf.avail/57-dejavu-sans-mono.conf ... Removing obsolete conffile /etc/fonts/conf.avail/58-dejavu-lgc-sans-mono.conf ... Setting up libncursesw6:amd64 (6.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up logsave (1.47.1-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up libwebp7:amd64 (1.4.0-0.1) ... Setting up libnuma1:amd64 (2.0.18-1) ... Setting up libdav1d7:amd64 (1.4.3-1) ... Setting up mount (2.40.2-9) ... Setting up perl-modules-5.40 (5.40.0-6) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up librav1e0.7:amd64 (0.7.1-7+b2) ... Setting up liblua5.3-0:amd64 (5.3.6-2+b2) ... Setting up procps (2:4.0.4-6) ... Installing new version of config file /etc/sysctl.d/README.sysctl ... Setting up libapr1t64:amd64 (1.7.5-1) ... Setting up liblua5.4-0:amd64 (5.4.6-3+b1) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libabsl20230802:amd64 (20230802.1-4) ... Setting up mawk (1.3.4.20240905-1) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up apache2-data (2.4.62-3) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libde265-0:amd64 (1.0.15-1+b2) ... Setting up openssl (3.3.2-1) ... Installing new version of config file /etc/ssl/openssl.cnf ... Setting up libyuv0:amd64 (0.0.1888.20240710-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up libaprutil1t64:amd64 (1.6.3-3) ... Setting up libxpm4:amd64 (1:3.5.17-1+b1) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up e2fsprogs (1.47.1-1) ... Installing new version of config file /etc/cron.d/e2scrub_all ... Installing new version of config file /etc/mke2fs.conf ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up libperl5.40:amd64 (5.40.0-6) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt, it does not contain exactly one certificate or CRL 14 added, 8 removed; done. Setting up perl (5.40.0-6) ... Setting up libglib2.0-0t64:amd64 (2.82.1-1) ... No schema files found: doing nothing. Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libgav1-1:amd64 (0.19.0-2+b1) ... Setting up liblist-moreutils-xs-perl (0.430-4+b2) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libharfbuzz0b:amd64 (10.0.1-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up libexporter-tiny-perl (1.006002-1) ... Setting up libterm-readkey-perl (2.38-2+b4) ... Setting up liburi-perl (5.30-1) ... Setting up sqlite3 (3.46.1-1) ... Setting up libdbi-perl:amd64 (1.645-1+b1) ... Setting up apache2-utils (2.4.62-3) ... Setting up libnet-ssleay-perl:amd64 (1.94-2) ... Setting up libanyevent-perl (7.170-2+b6) ... Setting up libstring-approx-perl (3.28-2+b4) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libavif16:amd64 (1.1.1-1) ... Setting up libstatistics-descriptive-perl (3.0801-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libcurl4t64:amd64 (8.10.1-2) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libpq5:amd64 (17.0-1+b2) ... Setting up libcommon-sense-perl:amd64 (3.75-3+b3) ... Setting up libnet-http-perl (6.23-1) ... Setting up libdbd-pg-perl (3.18.0-1+b3) ... Setting up libaprutil1-ldap:amd64 (1.6.3-3) ... Setting up apache2-bin (2.4.62-3) ... Setting up libraqm0:amd64 (0.10.1-1+b1) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up libdbd-sqlite3-perl:amd64 (1.74-1+b3) ... Setting up libbio-db-seqfeature-perl (1.7.5-1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up apache2 (2.4.62-3) ... Installing new version of config file /etc/apache2/mods-available/ssl.load ... Installing new version of config file /etc/apache2/sites-available/default-ssl.conf ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libcgi-pm-perl (4.66-1) ... Setting up libheif-plugin-dav1d:amd64 (1.18.2-2) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libheif-plugin-libde265:amd64 (1.18.2-2) ... Setting up libwww-perl (6.77-1) ... Setting up libheif1:amd64 (1.18.2-2) ... Setting up libapache2-mod-perl2 (2.0.13-2+b1) ... apache2_invoke perl: already enabled invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libgd3:amd64 (2.3.3-12) ... Setting up libvm-ec2-perl (1.28-5) ... Setting up libgd-perl (2.78-1+b3) ... Setting up gbrowse (2.56+dfsg-12) ... Installing new version of config file /etc/gbrowse/ConfigData.pm ... apache2_invoke gbrowse: already enabled invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of reload. Setting up gbrowse-calign:amd64 (2.56+dfsg-12+b3) ... Processing triggers for debianutils (5.20) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 1m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-yf', 'dist-upgrade'] 1m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m2.1s DUMP: 76c73a92254ee22d7d193f130d7393fc - 1m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 1m2.4s DUMP: Package: gbrowse-calign Source: gbrowse (2.56+dfsg-12) Version: 2.56+dfsg-12+b3 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.40.0-6), perlapi-5.40.0, libc6 (>= 2.4), gbrowse Description-en: CAlign helper Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). . This package provides the CAlign helper for use with Realign. It speeds up Smith-Waterman alignment. Description-md5: 52106883c9df300bab833de801839ea2 Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-12+b3_amd64.deb Size: 34548 MD5sum: 768a4862d87eaa452403c9cc37a9d3c1 SHA256: 311b70df31dc7a1b55fea3d13caf41a526ea648d1b964152ff9184eb9e8a44b4 1m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 1m2.4s INFO: apt-cache knows about the following packages: gbrowse-calign 1m2.4s INFO: Running scripts pre_install 1m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_database-server'] 1m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_database-server'] 1m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_exceptions'] 1m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_exceptions'] 1m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_extras'] 1m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_extras'] 1m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture'] 1m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture'] 1m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy'] 1m2.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy'] 1m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy', 'gbrowse-calign'] 1m2.5s DUMP: gbrowse-calign: Installed: 2.56+dfsg-12+b3 Candidate: 2.56+dfsg-12+b3 Version table: *** 2.56+dfsg-12+b3 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 100 /var/lib/dpkg/status 1m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy', 'gbrowse-calign'] 1m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-y', 'install', 'gbrowse-calign'] 1m3.0s DUMP: Reading package lists... Building dependency tree... Reading state information... gbrowse-calign is already the newest version (2.56+dfsg-12+b3). The following packages were automatically installed and are no longer required: libabsl20220623 libavif15 libdav1d6 liblua5.3-0 libnuma1 libperl5.36 librav1e0 libsvtav1enc1 libx265-199 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-y', 'install', 'gbrowse-calign'] 1m3.0s INFO: Running scripts post_install 1m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_install_exceptions'] 1m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_install_exceptions'] 1m3.0s INFO: Running scripts post_distupgrade 1m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_exceptions'] 1m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_exceptions'] 1m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_zz_backports'] 1m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_zz_backports'] 1m3.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m4.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m4.1s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpnqhowlx7 to sid 1m4.1s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 1m4.1s INFO: Running scripts pre_distupgrade 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_exceptions'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_exceptions'] 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_zz_database-server'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_zz_database-server'] 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 1m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 1m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', 'update'] 1m7.4s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [202 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.0 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7335 kB] Fetched 17.6 MB in 3s (6971 kB/s) Reading package lists... 1m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', 'update'] 1m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-yf', 'dist-upgrade'] 1m10.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libabsl20220623 libavif15 libdav1d6 liblua5.3-0 libnuma1 libperl5.36 librav1e0 libsvtav1enc1 libx265-199 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. The following packages will be upgraded: apt coreutils gcc-14-base gpgv libapt-pkg6.0t64 libatomic1 libaudit-common libaudit1 libdav1d7 libgcc-s1 libglib2.0-0t64 libgomp1 liblzma5 libstdc++6 sysvinit-utils tzdata 16 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 9256 kB of archives. After this operation, 278 kB disk space will be freed. Get:1 http://deb.debian.org/debian sid/main amd64 coreutils amd64 9.5-1+b1 [2922 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 14.2.0-7 [9284 B] Get:3 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 14.2.0-7 [137 kB] Get:4 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-7 [46.9 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-7 [72.8 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-7 [713 kB] Get:7 http://deb.debian.org/debian sid/main amd64 liblzma5 amd64 5.6.3-1 [272 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libapt-pkg6.0t64 amd64 2.9.10 [1045 kB] Get:9 http://deb.debian.org/debian sid/main amd64 gpgv amd64 2.2.45-1 [218 kB] Get:10 http://deb.debian.org/debian sid/main amd64 apt amd64 2.9.10 [1413 kB] Get:11 http://deb.debian.org/debian sid/main amd64 sysvinit-utils amd64 3.11-1 [33.1 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libaudit-common all 1:4.0.1-1 [12.3 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libaudit1 amd64 1:4.0.1-1 [54.5 kB] Get:14 http://deb.debian.org/debian sid/main amd64 tzdata all 2024b-3 [255 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libdav1d7 amd64 1.5.0-1 [549 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libglib2.0-0t64 amd64 2.82.2-2 [1501 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9256 kB in 0s (95.2 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16846 files and directories currently installed.) Preparing to unpack .../coreutils_9.5-1+b1_amd64.deb ... Unpacking coreutils (9.5-1+b1) over (9.4-3.1) ... Setting up coreutils (9.5-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../libatomic1_14.2.0-7_amd64.deb ... Unpacking libatomic1:amd64 (14.2.0-7) over (14.2.0-6) ... Preparing to unpack .../libgomp1_14.2.0-7_amd64.deb ... Unpacking libgomp1:amd64 (14.2.0-7) over (14.2.0-6) ... Preparing to unpack .../gcc-14-base_14.2.0-7_amd64.deb ... Unpacking gcc-14-base:amd64 (14.2.0-7) over (14.2.0-6) ... Setting up gcc-14-base:amd64 (14.2.0-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14.2.0-7_amd64.deb ... Unpacking libgcc-s1:amd64 (14.2.0-7) over (14.2.0-6) ... Setting up libgcc-s1:amd64 (14.2.0-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../libstdc++6_14.2.0-7_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-7) over (14.2.0-6) ... Setting up libstdc++6:amd64 (14.2.0-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../liblzma5_5.6.3-1_amd64.deb ... Unpacking liblzma5:amd64 (5.6.3-1) over (5.6.2-2) ... Setting up liblzma5:amd64 (5.6.3-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.10_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.10) over (2.9.8) ... Setting up libapt-pkg6.0t64:amd64 (2.9.10) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.45-1_amd64.deb ... Unpacking gpgv (2.2.45-1) over (2.2.44-1) ... Setting up gpgv (2.2.45-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.10_amd64.deb ... Unpacking apt (2.9.10) over (2.9.8) ... Setting up apt (2.9.10) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.11-1_amd64.deb ... Unpacking sysvinit-utils (3.11-1) over (3.10-3) ... Setting up sysvinit-utils (3.11-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a4.0.1-1_all.deb ... Unpacking libaudit-common (1:4.0.1-1) over (1:3.1.2-4) ... Setting up libaudit-common (1:4.0.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16847 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a4.0.1-1_amd64.deb ... Unpacking libaudit1:amd64 (1:4.0.1-1) over (1:3.1.2-4+b1) ... Setting up libaudit1:amd64 (1:4.0.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16846 files and directories currently installed.) Preparing to unpack .../tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) over (2024a-4) ... Preparing to unpack .../libdav1d7_1.5.0-1_amd64.deb ... Unpacking libdav1d7:amd64 (1.5.0-1) over (1.4.3-1) ... Preparing to unpack .../libglib2.0-0t64_2.82.2-2_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.82.2-2) over (2.82.1-1) ... Setting up libgomp1:amd64 (14.2.0-7) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Oct 27 04:44:01 UTC 2024. Universal Time is now: Sun Oct 27 04:44:01 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libatomic1:amd64 (14.2.0-7) ... Setting up libdav1d7:amd64 (1.5.0-1) ... Setting up libglib2.0-0t64:amd64 (2.82.2-2) ... No schema files found: doing nothing. Processing triggers for libc-bin (2.40-3) ... 1m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-yf', 'dist-upgrade'] 1m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m11.9s DUMP: bb9428f4916d9d9c688a3f27bd88827a - 1m11.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m11.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 1m12.2s DUMP: Package: gbrowse-calign Source: gbrowse (2.56+dfsg-12) Version: 2.56+dfsg-12+b3 Installed-Size: 79 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: perl (>= 5.40.0-6), perlapi-5.40.0, libc6 (>= 2.4), gbrowse Description-en: CAlign helper Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). . This package provides the CAlign helper for use with Realign. It speeds up Smith-Waterman alignment. Description-md5: 52106883c9df300bab833de801839ea2 Multi-Arch: same Homepage: http://gmod.org/wiki/GBrowse Tag: devel::lang:c, devel::library, field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::devel-lib, role::program, role::shared-lib, scope::utility Section: science Priority: optional Filename: pool/main/g/gbrowse/gbrowse-calign_2.56+dfsg-12+b3_amd64.deb Size: 34548 MD5sum: 768a4862d87eaa452403c9cc37a9d3c1 SHA256: 311b70df31dc7a1b55fea3d13caf41a526ea648d1b964152ff9184eb9e8a44b4 1m12.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'show', '--no-all-versions', 'gbrowse-calign'] 1m12.2s INFO: apt-cache knows about the following packages: gbrowse-calign 1m12.2s INFO: Running scripts pre_install 1m12.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_database-server'] 1m12.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_database-server'] 1m12.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_exceptions'] 1m12.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_exceptions'] 1m12.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_extras'] 1m12.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_extras'] 1m12.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture'] 1m12.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture'] 1m12.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m12.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m12.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy'] 1m12.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy'] 1m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy', 'gbrowse-calign'] 1m12.4s DUMP: gbrowse-calign: Installed: 2.56+dfsg-12+b3 Candidate: 2.56+dfsg-12+b3 Version table: *** 2.56+dfsg-12+b3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 1m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy', 'gbrowse-calign'] 1m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-y', 'install', 'gbrowse-calign'] 1m12.9s DUMP: Reading package lists... Building dependency tree... Reading state information... gbrowse-calign is already the newest version (2.56+dfsg-12+b3). The following packages were automatically installed and are no longer required: libabsl20220623 libavif15 libdav1d6 liblua5.3-0 libnuma1 libperl5.36 librav1e0 libsvtav1enc1 libx265-199 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-y', 'install', 'gbrowse-calign'] 1m12.9s INFO: Running scripts post_install 1m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_install_exceptions'] 1m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_install_exceptions'] 1m12.9s INFO: Running scripts post_distupgrade 1m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m12.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m12.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_exceptions'] 1m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_exceptions'] 1m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_zz_backports'] 1m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_distupgrade_zz_backports'] 1m13.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m14.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m14.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m15.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m15.2s INFO: Running scripts pre_install 1m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_database-server'] 1m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_database-server'] 1m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_exceptions'] 1m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_exceptions'] 1m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_extras'] 1m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_extras'] 1m15.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture'] 1m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture'] 1m15.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m15.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy'] 1m15.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy'] 1m15.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy', 'gbrowse-calign'] 1m15.4s DUMP: gbrowse-calign: Installed: 2.56+dfsg-12+b3 Candidate: 2.56+dfsg-12+b3 Version table: *** 2.56+dfsg-12+b3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 1m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-cache', 'policy', 'gbrowse-calign'] 1m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-y', 'install', 'gbrowse-calign=2.56+dfsg-12+b3'] 1m16.1s DUMP: Reading package lists... Building dependency tree... Reading state information... gbrowse-calign is already the newest version (2.56+dfsg-12+b3). The following packages were automatically installed and are no longer required: libabsl20220623 libavif15 libdav1d6 liblua5.3-0 libnuma1 libperl5.36 librav1e0 libsvtav1enc1 libx265-199 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'apt-get', '-y', 'install', 'gbrowse-calign=2.56+dfsg-12+b3'] 1m16.1s INFO: Running scripts post_install 1m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_install_exceptions'] 1m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', 'tmp/scripts/post_install_exceptions'] 1m16.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m17.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m18.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', '-ac', '--ignore-obsolete'] 1m21.5s DUMP: debsums: missing file /srv/piuparts.debian.org/tmp/tmpnqhowlx7/etc/sysctl.conf (from procps package) 1m21.5s DEBUG: Command failed (status=2), but ignoring error: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7', '-ac', '--ignore-obsolete'] 1m21.5s ERROR: FAIL: debsums reports modifications inside the chroot: debsums: missing file /etc/sysctl.conf (from procps package) 1m22.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/shm'] 1m22.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/shm'] 1m22.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/console'] 1m22.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/console'] 1m22.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/ptmx'] 1m22.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/ptmx'] 1m22.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/pts'] 1m22.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/dev/pts'] 1m22.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/proc'] 1m22.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7/proc'] 1m22.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m22.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpnqhowlx7'] 1m22.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpnqhowlx7 1m22.7s ERROR: piuparts run ends. ret=1 End: 2024-10-27 04:44:14 GMT