Start: 2024-10-06 16:31:23 GMT [stable] Package: jalview Version: 2.11.2.5+dfsg-3 Installed-Size: 8100 Maintainer: Debian Java Maintainers Architecture: all Depends: default-jre, debconf, libcommons-discovery-java, libjaxws-java, groovy, javahelp2, libandroid-json-org-java, libapache-mime4j-java, libaxis-java, libbiojava6-java, libhtsjdk-java, libhttpclient-java, libhttpcore-java, libhttpmime-java, libintervalstorej-java, libjaba-client-java, libjaxb-api-java, libjaxb-java, libjaxrs-api-java, libjersey1-client-java, libjersey1-core-java, libjetty9-java, libjfreesvg-java, libjmol-java, libjson-simple-java, libjsoup-java, libjswingreader-java, liblog4j1.2-java, liblog4j2-java, libmiglayout-java, libslf4j-java, libvamsas-client-java, varna, debconf (>= 0.5) | debconf-2.0 Suggests: clustalw, kalign, t-coffee Description: multiple alignment editor Homepage: https://www.jalview.org Description-md5: 92268a8829a03697abafe2eb31617a27 Section: science Priority: optional Filename: pool/main/j/jalview/jalview_2.11.2.5+dfsg-3_all.deb Size: 7771132 MD5sum: 04b77bbcdba7e81a89d7ff59d0ef4f37 SHA256: 47bf017b59e7f9d101f6d8adac476345a9f1053e87984a45fcfb563d14bc8302 [testing] Package: jalview Version: 2.11.3.1+dfsg-1 Installed-Size: 9076 Maintainer: Debian Java Maintainers Architecture: all Depends: default-jre, debconf, libcommons-discovery-java, libjaxws-java, groovy, javahelp2, libandroid-json-org-java, libapache-mime4j-java, libaxis-java, libbiojava6-java, libhtsjdk-java, libhttpclient-java, libhttpcore-java, libhttpmime-java, libintervalstorej-java, libjaba-client-java, libjaxb-api-java, libjaxb-java, libjaxrs-api-java, libjersey1-client-java, libjersey1-core-java, libjetty9-java, libjfreesvg-java, libjmol-java, libjson-simple-java, libjsoup-java, libjswingreader-java, liblog4j1.2-java, liblog4j2-java, libmiglayout-java, libslf4j-java, libvamsas-client-java, varna, debconf (>= 0.5) | debconf-2.0 Suggests: clustalw, kalign, t-coffee Description: multiple alignment editor Homepage: https://www.jalview.org Description-md5: 92268a8829a03697abafe2eb31617a27 Section: science Priority: optional Filename: pool/main/j/jalview/jalview_2.11.3.1+dfsg-1_all.deb Size: 8765684 MD5sum: 6b853255b3a09f40bc3e4b6b8e64212a SHA256: 3916ec50fa906bc3db83b4be3e4c9d03135d65f16bd95f95de23662a75f4aa35 [sid] Package: jalview Version: 2.11.4.0+dfsg-3 Installed-Size: 9285 Maintainer: Debian Java Maintainers Architecture: all Depends: default-jre, debconf, libcommons-discovery-java, libjaxws-java, groovy, javahelp2, libandroid-json-org-java, libapache-mime4j-java, libaxis-java, libbiojava6-java, libcommons-math3-java, libhtsjdk-java, libhttpclient-java, libhttpcore-java, libhttpmime-java, libintervalstorej-java, libjaba-client-java, libjaxb-api-java, libjaxb-java, libjaxrs-api-java, libjersey1-client-java, libjersey1-core-java, libjetty9-java, libjfreesvg-java, libjmol-java, libjson-simple-java, libjsoup-java, libjswingreader-java, liblog4j1.2-java, liblog4j2-java, libmiglayout-java, libslf4j-java, libvamsas-client-java, varna, debconf (>= 0.5) | debconf-2.0 Suggests: clustalw, kalign, t-coffee Description: multiple alignment editor Homepage: https://www.jalview.org Description-md5: 92268a8829a03697abafe2eb31617a27 Section: science Priority: optional Filename: pool/main/j/jalview/jalview_2.11.4.0+dfsg-3_all.deb Size: 8967264 MD5sum: 49658bcba3edd85a4fa5a8155a46a6db SHA256: e4008e42cff25c1a04eca86a9cb32e6ef8bf26dcde6d19f0cdb742920fd811bc Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat --apt jalview=2.11.4.0+dfsg-3 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat --apt jalview=2.11.4.0+dfsg-3 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-32-amd64 #1 SMP Debian 5.10.223-1 (2024-08-10) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpnyhxg0b0 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpnyhxg0b0 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/proc'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/proc'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/pts'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/pts'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/ptmx'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/ptmx'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/console'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/console'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/shm'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/shm'] 0m0.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m0.3s DEBUG: Created policy-rc.d and chmodded it. 0m0.3s DEBUG: Created resolv.conf. 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpnyhxg0b0/tmp/scripts/ 0m0.3s INFO: Running scripts post_chroot_unpack 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'update'] 0m1.0s DUMP: Hit:1 http://deb.debian.org/debian bookworm InRelease Reading package lists... 0m1.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'update'] 0m1.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-yf', 'dist-upgrade'] 0m1.3s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-yf', 'dist-upgrade'] 0m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m1.4s DUMP: 14b5c1b94e8a6c425b0bba0e4df4ee12 - 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m1.4s INFO: Running scripts post_setup 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_dummy_users'] 0m1.9s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_dummy_users'] 0m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_forbid_home'] 0m2.0s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_forbid_home'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.0s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_minimize'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_minimize'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_zz_backports'] 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_setup_zz_backports'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.1s DUMP: install ok installed adduser adduser 3.134 install ok installed apt apt 2.6.1 install ok installed base-files base-files 12.4+deb12u7 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2+b7 install ok installed bsdutils bsdutils 1:2.38.1-5+deb12u1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-2 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2023.3+deb12u1 install ok installed debianutils debianutils 5.7-0.5~deb12u1 install ok installed diffutils diffutils 1:3.8-4 install ok installed dpkg dpkg 1.21.22 install ok installed e2fsprogs e2fsprogs 1.47.0-2 install ok installed findutils findutils 4.9.0-4 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14 install ok installed gpgv gpgv 2.2.40-1.1 install ok installed grep grep 3.8-5 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.6.1 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.9-1 install ok installed libaudit1:amd64 libaudit1 1:3.0.9-1 install ok installed libblkid1:amd64 libblkid1 2.38.1-5+deb12u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-9+deb12u8 install ok installed libc6:amd64 libc6 2.36-9+deb12u8 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b3 install ok installed libcap2:amd64 libcap2 1:2.66-4 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.270 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.9-2+deb12u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.2 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-5+deb12u1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6+deb12u1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6+deb12u1 install ok installed libpam-runtime libpam-runtime 1.5.2-6+deb12u1 install ok installed libpam0g:amd64 libpam0g 1.5.2-6+deb12u1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+deb12u1 install ok installed libselinux1:amd64 libselinux1 3.4-1+b6 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b5 install ok installed libsepol2:amd64 libsepol2 3.4-2.1 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-5+deb12u1 install ok installed libss2:amd64 libss2 1.47.0-2 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14 install ok installed libsystemd0:amd64 libsystemd0 252.30-1~deb12u2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.4-4 install ok installed libudev1:amd64 libudev1 252.30-1~deb12u2 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-5+deb12u1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.4+dfsg2-5 install ok installed login login 1:4.13+dfsg1-1+b1 install ok installed logsave logsave 1.47.0-2 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-5+deb12u1 install ok installed ncurses-base ncurses-base 6.4-4 install ok installed ncurses-bin ncurses-bin 6.4-4 install ok installed passwd passwd 1:4.13+dfsg1-1+b1 install ok installed perl-base perl-base 5.36.0-7+deb12u1 install ok installed sed sed 4.9-1 install ok installed sysvinit-utils sysvinit-utils 3.06-4 install ok installed tar tar 1.34+dfsg-1.2+deb12u1 install ok installed tzdata tzdata 2024a-0+deb12u1 install ok installed usr-is-merged usr-is-merged 37~deb12u1 install ok installed util-linux util-linux 2.38.1-5+deb12u1 install ok installed util-linux-extra util-linux-extra 2.38.1-5+deb12u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.1s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat 0m2.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 0m2.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 0m2.3s INFO: Running scripts is_testable 0m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/is_testable_uninstallable'] 0m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/is_testable_uninstallable'] 0m2.3s INFO: Running scripts pre_test 0m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_test_exceptions'] 0m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_test_exceptions'] 0m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_test_root_password'] 0m2.4s DUMP: New password: Retype new password: passwd: password updated successfully 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_test_root_password'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'show', '--no-all-versions', 'jalview'] 0m2.5s DUMP: Package: jalview Version: 2.11.2.5+dfsg-3 Installed-Size: 8100 Maintainer: Debian Java Maintainers Architecture: all Depends: default-jre, debconf, libcommons-discovery-java, libjaxws-java, groovy, javahelp2, libandroid-json-org-java, libapache-mime4j-java, libaxis-java, libbiojava6-java, libhtsjdk-java, libhttpclient-java, libhttpcore-java, libhttpmime-java, libintervalstorej-java, libjaba-client-java, libjaxb-api-java, libjaxb-java, libjaxrs-api-java, libjersey1-client-java, libjersey1-core-java, libjetty9-java, libjfreesvg-java, libjmol-java, libjson-simple-java, libjsoup-java, libjswingreader-java, liblog4j1.2-java, liblog4j2-java, libmiglayout-java, libslf4j-java, libvamsas-client-java, varna, debconf (>= 0.5) | debconf-2.0 Suggests: clustalw, kalign, t-coffee Description-en: multiple alignment editor JalView is a Java DNA, RNA and protein sequence alignment editor that can work with sequence alignments produced by programs implementing alignment algorithms such as clustalw, kalign and t-coffee. . It has lots of features, is actively developed, and will compare advantageously to BioEdit, while being free as in free speech! Description-md5: 92268a8829a03697abafe2eb31617a27 Homepage: https://www.jalview.org Section: science Priority: optional Filename: pool/main/j/jalview/jalview_2.11.2.5+dfsg-3_all.deb Size: 7771132 MD5sum: 04b77bbcdba7e81a89d7ff59d0ef4f37 SHA256: 47bf017b59e7f9d101f6d8adac476345a9f1053e87984a45fcfb563d14bc8302 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'show', '--no-all-versions', 'jalview'] 0m2.5s INFO: apt-cache knows about the following packages: jalview 0m2.5s INFO: Running scripts pre_install 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_database-server'] 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_database-server'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_exceptions'] 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_exceptions'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_extras'] 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_extras'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy'] 0m2.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release v=12.7,o=Debian,a=stable,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy', 'jalview'] 0m2.5s DUMP: jalview: Installed: (none) Candidate: 2.11.2.5+dfsg-3 Version table: 2.11.2.5+dfsg-3 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy', 'jalview'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-y', 'install', 'jalview'] 0m27.8s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: adwaita-icon-theme ant ant-optional antlr at-spi2-common ca-certificates ca-certificates-java default-jre default-jre-headless fontconfig fontconfig-config fonts-dejavu-core groovy gtk-update-icon-cache hicolor-icon-theme ivy java-common javahelp2 junit4 libactivation-java libandroid-json-org-java libantlr-java libantlr4-runtime-java libaopalliance-java libapache-mime4j-java libapache-pom-java libargs4j-java libasm-java libasound2 libasound2-data libatinject-jsr330-api-java libatk1.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libaxis-java libbiojava6-java libbrotli1 libbsd0 libbsf-java libcairo2 libcastor-core-java libcastor-xml-java libcdi-api-java libciftools-java libcodemodel-java libcommons-cli-java libcommons-codec-java libcommons-compress-java libcommons-discovery-java libcommons-exec-java libcommons-httpclient-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-lang3-java libcommons-logging-java libcommons-math-java libcommons-parent-java libcommons-text-java libcups2 libdatrie1 libdbus-1-3 libdeflate0 libdom4j-java libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libdtd-parser-java libedit2 libel-api-java libelf1 liberror-prone-java libexec-maven-plugin-java libexpat1 libfastinfoset-java libfastutil-java libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgeronimo-annotation-1.3-spec-java libgeronimo-interceptor-3.0-spec-java libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgmbal-commons-java libgmbal-java libgmbal-pfl-java libgoogle-gson-java libgraphite2-3 libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libguava-java libguice-java libhamcrest-java libharfbuzz0b libhawtjni-runtime-java libhtsjdk-java libhttpclient-java libhttpcore-java libhttpmime-java libicu72 libinchi1 libintervalstorej-java libisorelax-java libistack-commons-java libitext5-java libjaba-client-java libjackson2-annotations-java libjackson2-core-java libjackson2-databind-java libjansi-java libjansi-native-java libjansi1-java libjaxb-api-java libjaxb-java libjaxen-java libjaxrs-api-java libjaxws-api-java libjaxws-java libjbig0 libjersey1-client-java libjersey1-core-java libjetty9-java libjfreesvg-java libjgrapht-java libjgraphx-java libjheaps-java libjline2-java libjmol-java libjni-inchi-java libjni-inchi-jni libjpeg62-turbo libjson-simple-java libjsoup-java libjsp-api-java libjsr305-java libjsr311-api-java libjswingreader-java libjws-api-java libk5crypto3 libkeyutils1 libknopflerfish-osgi-framework-java libkrb5-3 libkrb5support0 liblcms2-2 liblerc4 liblightcouch-java libllvm15 liblog4j1.2-java liblog4j2-java libmail-java libmaven-archiver-java libmaven-compiler-plugin-java libmaven-file-management-java libmaven-jar-plugin-java libmaven-parent-java libmaven-resolver-java libmaven-shared-incremental-java libmaven-shared-io-java libmaven-shared-utils-java libmaven3-core-java libmbedcrypto7 libmbedtls14 libmbedx509-1 libmetro-policy-java libmiglayout-java libmimepull-java libmjson-java libmmtf-java libmongodb-java libmsgpack-java libmsv-java libnaga-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni libnspr4 libnss3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libpixman-1-0 libplexus-archiver-java libplexus-cipher-java libplexus-classworlds-java libplexus-compiler-java libplexus-component-annotations-java libplexus-container-default-java libplexus-interpolation-java libplexus-io-java libplexus-languages-java libplexus-sec-dispatcher-java libplexus-utils2-java libpng16-16 libqdox-java libqdox2-java librelaxng-datatype-java librhino-java librngom-java libsaaj-java libsaaj-ri-java libsensors-config libsensors5 libservlet-api-java libsisu-inject-java libsisu-plexus-java libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 libsqlite3-0 libssl3 libstax-ex-java libstax2-api-java libstreambuffer-java libthai-data libthai0 libtiff6 libtxw2-java libvamsas-client-java libvecmath-java libwagon-http-java libwagon-provider-api-java libwebp7 libwebsocket-api-java libwoodstox-java libwsdl4j-java libx11-6 libx11-data libx11-xcb1 libxau6 libxbean-reflect-java libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxi6 libxinerama1 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxpp3-java libxrandr2 libxrender1 libxshmfence1 libxsom-java libxstream-java libxtst6 libxxf86vm1 libxz-java libz3-4 ncbi-vdb-data openjdk-17-jre openjdk-17-jre-headless openssl shared-mime-info varna x11-common Suggested packages: ant-doc default-jdk | java-compiler | java-sdk javacc junit jython libbcel-java libcommons-net-java libjaxp1.3-java libjdepend-java libjsch-java liboro-java libregexp-java libxalan2-java groovy-doc ivy-doc libbcpg-java libbcprov-java libjsch-agent-proxy-java clustalw kalign t-coffee javahelp2-doc libandroid-json-org-java-doc libasound2-plugins alsa-utils libatinject-jsr330-api-java-doc libaxis-java-doc libbiojava6-java-doc bsh rhino libcastor-java-doc libcommons-httpclient-java-doc libcommons-io-java-doc libcommons-lang-java-doc libcommons-lang3-java-doc libavalon-framework-java libcommons-logging-java-doc libexcalibur-logkit-java cups-common libxpp2-java low-memory-monitor libgoogle-gson-java-doc krb5-doc krb5-user gvfs libcglib-java picard-tools python3 libbcpkix-java libxml-security-java libjackson2-annotations-java-doc libjdom1-java libxom-java jetty9 libjfreesvg-java-doc libjmol-java-doc libjson-simple-doc libjsoup-java-doc libjsr305-java-doc liblcms2-utils liblog4j1.2-java-doc libcommons-csv-java libconversant-disruptor-java libdisruptor-java libgeronimo-jms-1.1-spec-java libjackson2-dataformat-xml-java libjackson2-dataformat-yaml libjctools-java libjeromq-java libmail-java-doc libmaven-file-management-java-doc libmaven-shared-incremental-java-doc libmaven-shared-utils-java-doc liblogback-java libswt-gtk-4-java libmmtf-java-doc libngs-java-doc pciutils pcscd libeclipse-jdt-core-java libplexus-utils2-java-doc libqdox-java-doc lm-sensors testng libxerces2-java-doc libxml-commons-resolver1.1-java-doc libcglib-nodep-java libjdom2-java libjettison-java libjoda-time-java libkxml2-java libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic Recommended packages: librsvg2-common libgpars-groovy-java libjcommander-java alsa-ucm-conf alsa-topology-conf liboro-java libregexp-java dbus libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs libgail-common libgtk2.0-bin krb5-locales libatk-wrapper-java-jni fonts-dejavu-extra The following NEW packages will be installed: adwaita-icon-theme ant ant-optional antlr at-spi2-common ca-certificates ca-certificates-java default-jre default-jre-headless fontconfig fontconfig-config fonts-dejavu-core groovy gtk-update-icon-cache hicolor-icon-theme ivy jalview java-common javahelp2 junit4 libactivation-java libandroid-json-org-java libantlr-java libantlr4-runtime-java libaopalliance-java libapache-mime4j-java libapache-pom-java libargs4j-java libasm-java libasound2 libasound2-data libatinject-jsr330-api-java libatk1.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libaxis-java libbiojava6-java libbrotli1 libbsd0 libbsf-java libcairo2 libcastor-core-java libcastor-xml-java libcdi-api-java libciftools-java libcodemodel-java libcommons-cli-java libcommons-codec-java libcommons-compress-java libcommons-discovery-java libcommons-exec-java libcommons-httpclient-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-lang3-java libcommons-logging-java libcommons-math-java libcommons-parent-java libcommons-text-java libcups2 libdatrie1 libdbus-1-3 libdeflate0 libdom4j-java libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libdtd-parser-java libedit2 libel-api-java libelf1 liberror-prone-java libexec-maven-plugin-java libexpat1 libfastinfoset-java libfastutil-java libfontconfig1 libfreetype6 libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgeronimo-annotation-1.3-spec-java libgeronimo-interceptor-3.0-spec-java libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgmbal-commons-java libgmbal-java libgmbal-pfl-java libgoogle-gson-java libgraphite2-3 libgssapi-krb5-2 libgtk2.0-0 libgtk2.0-common libguava-java libguice-java libhamcrest-java libharfbuzz0b libhawtjni-runtime-java libhtsjdk-java libhttpclient-java libhttpcore-java libhttpmime-java libicu72 libinchi1 libintervalstorej-java libisorelax-java libistack-commons-java libitext5-java libjaba-client-java libjackson2-annotations-java libjackson2-core-java libjackson2-databind-java libjansi-java libjansi-native-java libjansi1-java libjaxb-api-java libjaxb-java libjaxen-java libjaxrs-api-java libjaxws-api-java libjaxws-java libjbig0 libjersey1-client-java libjersey1-core-java libjetty9-java libjfreesvg-java libjgrapht-java libjgraphx-java libjheaps-java libjline2-java libjmol-java libjni-inchi-java libjni-inchi-jni libjpeg62-turbo libjson-simple-java libjsoup-java libjsp-api-java libjsr305-java libjsr311-api-java libjswingreader-java libjws-api-java libk5crypto3 libkeyutils1 libknopflerfish-osgi-framework-java libkrb5-3 libkrb5support0 liblcms2-2 liblerc4 liblightcouch-java libllvm15 liblog4j1.2-java liblog4j2-java libmail-java libmaven-archiver-java libmaven-compiler-plugin-java libmaven-file-management-java libmaven-jar-plugin-java libmaven-parent-java libmaven-resolver-java libmaven-shared-incremental-java libmaven-shared-io-java libmaven-shared-utils-java libmaven3-core-java libmbedcrypto7 libmbedtls14 libmbedx509-1 libmetro-policy-java libmiglayout-java libmimepull-java libmjson-java libmmtf-java libmongodb-java libmsgpack-java libmsv-java libnaga-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni libnspr4 libnss3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libpixman-1-0 libplexus-archiver-java libplexus-cipher-java libplexus-classworlds-java libplexus-compiler-java libplexus-component-annotations-java libplexus-container-default-java libplexus-interpolation-java libplexus-io-java libplexus-languages-java libplexus-sec-dispatcher-java libplexus-utils2-java libpng16-16 libqdox-java libqdox2-java librelaxng-datatype-java librhino-java librngom-java libsaaj-java libsaaj-ri-java libsensors-config libsensors5 libservlet-api-java libsisu-inject-java libsisu-plexus-java libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 libsqlite3-0 libssl3 libstax-ex-java libstax2-api-java libstreambuffer-java libthai-data libthai0 libtiff6 libtxw2-java libvamsas-client-java libvecmath-java libwagon-http-java libwagon-provider-api-java libwebp7 libwebsocket-api-java libwoodstox-java libwsdl4j-java libx11-6 libx11-data libx11-xcb1 libxau6 libxbean-reflect-java libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxi6 libxinerama1 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxpp3-java libxrandr2 libxrender1 libxshmfence1 libxsom-java libxstream-java libxtst6 libxxf86vm1 libxz-java libz3-4 ncbi-vdb-data openjdk-17-jre openjdk-17-jre-headless openssl shared-mime-info varna x11-common 0 upgraded, 287 newly installed, 0 to remove and 0 not upgraded. Need to get 246 MB of archives. After this operation, 692 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.14-1~deb12u1 [2024 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.14-1~deb12u1 [1423 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20230311 [153 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 hicolor-icon-theme all 0.17-2 [11.4 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 libgdk-pixbuf2.0-common all 2.42.10+dfsg-1+deb12u1 [306 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.6-2+deb12u3 [1400 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.3~deb12u1 [687 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 shared-mime-info amd64 2.2-1 [729 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.5-2 [166 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get:12 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.4-0.2+deb12u1 [286 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-6+deb12u1 [316 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.10+dfsg-1+deb12u1 [139 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 gtk-update-icon-cache amd64 3.24.38-2~deb12u2 [44.2 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 adwaita-icon-theme all 43-1 [5124 kB] Get:20 http://deb.debian.org/debian bookworm/main amd64 ca-certificates-java all 20230710~deb12u1 [11.9 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 java-common all 0.74 [6388 B] Get:22 http://deb.debian.org/debian bookworm/main amd64 libavahi-common-data amd64 0.8-10 [107 kB] Get:23 http://deb.debian.org/debian bookworm/main amd64 libavahi-common3 amd64 0.8-10 [41.6 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 libdbus-1-3 amd64 1.14.10-1~deb12u1 [201 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 libavahi-client3 amd64 0.8-10 [45.5 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-2+deb12u2 [32.6 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-2+deb12u2 [78.7 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:29 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-2+deb12u2 [332 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-2+deb12u2 [135 kB] Get:31 http://deb.debian.org/debian bookworm/main amd64 libcups2 amd64 2.4.2-3+deb12u7 [245 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-5+deb12u3 [398 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-6 [1068 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-4 [315 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-4 [386 kB] Get:38 http://deb.debian.org/debian bookworm/main amd64 liblcms2-2 amd64 2.14-2 [154 kB] Get:39 http://deb.debian.org/debian bookworm/main amd64 libnspr4 amd64 2:4.35-1 [113 kB] Get:40 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.40.1-2 [837 kB] Get:41 http://deb.debian.org/debian bookworm/main amd64 libnss3 amd64 2:3.87.1-1 [1331 kB] Get:42 http://deb.debian.org/debian bookworm/main amd64 libasound2-data all 1.2.8-1 [20.5 kB] Get:43 http://deb.debian.org/debian bookworm/main amd64 libasound2 amd64 1.2.8-1+b1 [362 kB] Get:44 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:45 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0+dfsg-3 [1945 kB] Get:46 http://deb.debian.org/debian bookworm/main amd64 libpcsclite1 amd64 1.9.9-2 [49.7 kB] Get:47 http://deb.debian.org/debian bookworm/main amd64 openjdk-17-jre-headless amd64 17.0.12+7-2~deb12u1 [43.7 MB] Get:48 http://deb.debian.org/debian bookworm/main amd64 default-jre-headless amd64 2:1.17-74 [2936 B] Get:49 http://deb.debian.org/debian bookworm/main amd64 ant all 1.10.13-1 [2161 kB] Get:50 http://deb.debian.org/debian bookworm/main amd64 ant-optional all 1.10.13-1 [449 kB] Get:51 http://deb.debian.org/debian bookworm/main amd64 libantlr-java all 2.7.7+dfsg-12 [458 kB] Get:52 http://deb.debian.org/debian bookworm/main amd64 antlr all 2.7.7+dfsg-12 [14.3 kB] Get:53 http://deb.debian.org/debian bookworm/main amd64 at-spi2-common all 2.46.0-5 [162 kB] Get:54 http://deb.debian.org/debian bookworm/main amd64 libgtk2.0-common all 2.24.33-2+deb12u1 [2660 kB] Get:55 http://deb.debian.org/debian bookworm/main amd64 libatk1.0-0 amd64 2.46.0-5 [49.6 kB] Get:56 http://deb.debian.org/debian bookworm/main amd64 libpixman-1-0 amd64 0.42.2-1 [546 kB] Get:57 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:58 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-2 [117 kB] Get:59 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:60 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:61 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.4-2+deb12u2 [292 kB] Get:62 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.4-2+deb12u2 [760 kB] Get:63 http://deb.debian.org/debian bookworm/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get:64 http://deb.debian.org/debian bookworm/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get:65 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:66 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get:67 http://deb.debian.org/debian bookworm/main amd64 libcairo2 amd64 1.16.0-7 [575 kB] Get:68 http://deb.debian.org/debian bookworm/main amd64 fontconfig amd64 2.14.1-4 [449 kB] Get:69 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get:70 http://deb.debian.org/debian bookworm/main amd64 libthai-data all 0.1.29-1 [176 kB] Get:71 http://deb.debian.org/debian bookworm/main amd64 libdatrie1 amd64 0.2.13-2+b1 [43.3 kB] Get:72 http://deb.debian.org/debian bookworm/main amd64 libthai0 amd64 0.1.29-1 [57.5 kB] Get:73 http://deb.debian.org/debian bookworm/main amd64 libpango-1.0-0 amd64 1.50.12+ds-1 [212 kB] Get:74 http://deb.debian.org/debian bookworm/main amd64 libpangoft2-1.0-0 amd64 1.50.12+ds-1 [47.4 kB] Get:75 http://deb.debian.org/debian bookworm/main amd64 libpangocairo-1.0-0 amd64 1.50.12+ds-1 [34.2 kB] Get:76 http://deb.debian.org/debian bookworm/main amd64 libxcomposite1 amd64 1:0.4.5-1 [16.6 kB] Get:77 http://deb.debian.org/debian bookworm/main amd64 libxfixes3 amd64 1:6.0.0-2 [22.7 kB] Get:78 http://deb.debian.org/debian bookworm/main amd64 libxcursor1 amd64 1:1.2.1-1 [40.9 kB] Get:79 http://deb.debian.org/debian bookworm/main amd64 libxdamage1 amd64 1:1.1.6-1 [15.1 kB] Get:80 http://deb.debian.org/debian bookworm/main amd64 libxi6 amd64 2:1.8-1+b1 [84.2 kB] Get:81 http://deb.debian.org/debian bookworm/main amd64 libxinerama1 amd64 2:1.1.4-3 [17.8 kB] Get:82 http://deb.debian.org/debian bookworm/main amd64 libxrandr2 amd64 2:1.5.2-2+b1 [39.2 kB] Get:83 http://deb.debian.org/debian bookworm/main amd64 libgtk2.0-0 amd64 2.24.33-2+deb12u1 [1811 kB] Get:84 http://deb.debian.org/debian bookworm/main amd64 libglvnd0 amd64 1.6.0-1 [51.8 kB] Get:85 http://deb.debian.org/debian bookworm/main amd64 libdrm-common all 2.4.114-1 [7112 B] Get:86 http://deb.debian.org/debian bookworm/main amd64 libdrm2 amd64 2.4.114-1+b1 [37.5 kB] Get:87 http://deb.debian.org/debian bookworm/main amd64 libglapi-mesa amd64 22.3.6-1+deb12u1 [35.7 kB] Get:88 http://deb.debian.org/debian bookworm/main amd64 libx11-xcb1 amd64 2:1.8.4-2+deb12u2 [192 kB] Get:89 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri2-0 amd64 1.15-1 [107 kB] Get:90 http://deb.debian.org/debian bookworm/main amd64 libxcb-dri3-0 amd64 1.15-1 [107 kB] Get:91 http://deb.debian.org/debian bookworm/main amd64 libxcb-glx0 amd64 1.15-1 [122 kB] Get:92 http://deb.debian.org/debian bookworm/main amd64 libxcb-present0 amd64 1.15-1 [105 kB] Get:93 http://deb.debian.org/debian bookworm/main amd64 libxcb-randr0 amd64 1.15-1 [117 kB] Get:94 http://deb.debian.org/debian bookworm/main amd64 libxcb-sync1 amd64 1.15-1 [109 kB] Get:95 http://deb.debian.org/debian bookworm/main amd64 libxcb-xfixes0 amd64 1.15-1 [109 kB] Get:96 http://deb.debian.org/debian bookworm/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get:97 http://deb.debian.org/debian bookworm/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:98 http://deb.debian.org/debian bookworm/main amd64 libdrm-amdgpu1 amd64 2.4.114-1+b1 [20.9 kB] Get:99 http://deb.debian.org/debian bookworm/main amd64 libpciaccess0 amd64 0.17-2 [51.4 kB] Get:100 http://deb.debian.org/debian bookworm/main amd64 libdrm-intel1 amd64 2.4.114-1+b1 [64.0 kB] Get:101 http://deb.debian.org/debian bookworm/main amd64 libdrm-nouveau2 amd64 2.4.114-1+b1 [19.1 kB] Get:102 http://deb.debian.org/debian bookworm/main amd64 libdrm-radeon1 amd64 2.4.114-1+b1 [21.8 kB] Get:103 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get:104 http://deb.debian.org/debian bookworm/main amd64 libedit2 amd64 3.1-20221030-2 [93.0 kB] Get:105 http://deb.debian.org/debian bookworm/main amd64 libz3-4 amd64 4.8.12-3.1 [7216 kB] Get:106 http://deb.debian.org/debian bookworm/main amd64 libllvm15 amd64 1:15.0.6-4+b1 [23.1 MB] Get:107 http://deb.debian.org/debian bookworm/main amd64 libsensors-config all 1:3.6.0-7.1 [14.3 kB] Get:108 http://deb.debian.org/debian bookworm/main amd64 libsensors5 amd64 1:3.6.0-7.1 [34.2 kB] Get:109 http://deb.debian.org/debian bookworm/main amd64 libgl1-mesa-dri amd64 22.3.6-1+deb12u1 [7239 kB] Get:110 http://deb.debian.org/debian bookworm/main amd64 libglx-mesa0 amd64 22.3.6-1+deb12u1 [147 kB] Get:111 http://deb.debian.org/debian bookworm/main amd64 libglx0 amd64 1.6.0-1 [34.4 kB] Get:112 http://deb.debian.org/debian bookworm/main amd64 libgl1 amd64 1.6.0-1 [88.4 kB] Get:113 http://deb.debian.org/debian bookworm/main amd64 libgif7 amd64 5.2.1-2.5 [46.9 kB] Get:114 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get:115 http://deb.debian.org/debian bookworm/main amd64 libxtst6 amd64 2:1.2.3-1.1 [28.0 kB] Get:116 http://deb.debian.org/debian bookworm/main amd64 openjdk-17-jre amd64 17.0.12+7-2~deb12u1 [184 kB] Get:117 http://deb.debian.org/debian bookworm/main amd64 default-jre amd64 2:1.17-74 [1056 B] Get:118 http://deb.debian.org/debian bookworm/main amd64 ivy all 2.5.1-2 [1288 kB] Get:119 http://deb.debian.org/debian bookworm/main amd64 libhamcrest-java all 2.2-1 [121 kB] Get:120 http://deb.debian.org/debian bookworm/main amd64 junit4 all 4.13.2-3 [348 kB] Get:121 http://deb.debian.org/debian bookworm/main amd64 libasm-java all 9.4-1 [389 kB] Get:122 http://deb.debian.org/debian bookworm/main amd64 libbsf-java all 1:2.4.0-8 [76.3 kB] Get:123 http://deb.debian.org/debian bookworm/main amd64 libcommons-cli-java all 1.5.0-1 [60.0 kB] Get:124 http://deb.debian.org/debian bookworm/main amd64 libapache-pom-java all 29-2 [5276 B] Get:125 http://deb.debian.org/debian bookworm/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:126 http://deb.debian.org/debian bookworm/main amd64 libcommons-logging-java all 1.2-3 [62.4 kB] Get:127 http://deb.debian.org/debian bookworm/main amd64 libjansi-java all 2.4.0-2 [105 kB] Get:128 http://deb.debian.org/debian bookworm/main amd64 libhawtjni-runtime-java all 1.18-1 [36.3 kB] Get:129 http://deb.debian.org/debian bookworm/main amd64 libjansi-native-java all 1.8-1 [26.0 kB] Get:130 http://deb.debian.org/debian bookworm/main amd64 libjansi1-java all 1.18-3 [66.5 kB] Get:131 http://deb.debian.org/debian bookworm/main amd64 libjline2-java all 2.14.6-5 [151 kB] Get:132 http://deb.debian.org/debian bookworm/main amd64 libjsp-api-java all 2.3.4-3 [53.7 kB] Get:133 http://deb.debian.org/debian bookworm/main amd64 libqdox-java all 1.12.1-3 [172 kB] Get:134 http://deb.debian.org/debian bookworm/main amd64 libservlet-api-java all 4.0.1-2 [81.0 kB] Get:135 http://deb.debian.org/debian bookworm/main amd64 libxpp3-java all 1.1.4c-3 [292 kB] Get:136 http://deb.debian.org/debian bookworm/main amd64 libxstream-java all 1.4.20-1 [565 kB] Get:137 http://deb.debian.org/debian bookworm/main amd64 groovy all 2.4.21-8 [12.9 MB] Get:138 http://deb.debian.org/debian bookworm/main amd64 libcommons-discovery-java all 0.5-4 [71.3 kB] Get:139 http://deb.debian.org/debian bookworm/main amd64 libactivation-java all 1.2.0-2 [84.7 kB] Get:140 http://deb.debian.org/debian bookworm/main amd64 libjaxb-api-java all 2.3.1-1 [119 kB] Get:141 http://deb.debian.org/debian bookworm/main amd64 libstax-ex-java all 1.7.8-3 [40.9 kB] Get:142 http://deb.debian.org/debian bookworm/main amd64 libstreambuffer-java all 1.5.4-1.1 [74.0 kB] Get:143 http://deb.debian.org/debian bookworm/main amd64 librelaxng-datatype-java all 1.0+ds1-3.1 [11.7 kB] Get:144 http://deb.debian.org/debian bookworm/main amd64 libxsom-java all 2.3.0.1-10.1 [400 kB] Get:145 http://deb.debian.org/debian bookworm/main amd64 libfastinfoset-java all 1.2.12-3 [343 kB] Get:146 http://deb.debian.org/debian bookworm/main amd64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB] Get:147 http://deb.debian.org/debian bookworm/main amd64 libgmbal-commons-java all 3.2.1-b003-1.1 [46.5 kB] Get:148 http://deb.debian.org/debian bookworm/main amd64 libgmbal-pfl-java all 4.0.1-b003-2 [1029 kB] Get:149 http://deb.debian.org/debian bookworm/main amd64 libgmbal-java all 4.0.0-b002-1.1 [188 kB] Get:150 http://deb.debian.org/debian bookworm/main amd64 libargs4j-java all 2.33-2 [138 kB] Get:151 http://deb.debian.org/debian bookworm/main amd64 libjaxen-java all 1.1.6-4 [214 kB] Get:152 http://deb.debian.org/debian bookworm/main amd64 libdom4j-java all 2.1.3-2 [310 kB] Get:153 http://deb.debian.org/debian bookworm/main amd64 libcommons-io-java all 2.11.0-2 [319 kB] Get:154 http://deb.debian.org/debian bookworm/main amd64 libmaven-shared-utils-java all 3.3.4-1 [138 kB] Get:155 http://deb.debian.org/debian bookworm/main amd64 libatinject-jsr330-api-java all 1.0+ds1-5 [5312 B] Get:156 http://deb.debian.org/debian bookworm/main amd64 libcommons-lang3-java all 3.12.0-2 [561 kB] Get:157 http://deb.debian.org/debian bookworm/main amd64 libaopalliance-java all 20070526-7 [8572 B] Get:158 http://deb.debian.org/debian bookworm/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB] Get:159 http://deb.debian.org/debian bookworm/main amd64 libjsr305-java all 0.1~+svn49-11 [26.9 kB] Get:160 http://deb.debian.org/debian bookworm/main amd64 libguava-java all 31.1-1 [2613 kB] Get:161 http://deb.debian.org/debian bookworm/main amd64 libguice-java all 4.2.3-2 [1435 kB] Get:162 http://deb.debian.org/debian bookworm/main amd64 libmaven-parent-java all 35-1 [6140 B] Get:163 http://deb.debian.org/debian bookworm/main amd64 libplexus-utils2-java all 3.4.2-1 [258 kB] Get:164 http://deb.debian.org/debian bookworm/main amd64 libwagon-provider-api-java all 3.5.3-1 [48.2 kB] Get:165 http://deb.debian.org/debian bookworm/main amd64 libmaven-resolver-java all 1.6.3-1 [548 kB] Get:166 http://deb.debian.org/debian bookworm/main amd64 libplexus-cipher-java all 2.0-1 [14.9 kB] Get:167 http://deb.debian.org/debian bookworm/main amd64 libplexus-classworlds-java all 2.7.0-1 [50.6 kB] Get:168 http://deb.debian.org/debian bookworm/main amd64 libplexus-component-annotations-java all 2.1.1-1 [7660 B] Get:169 http://deb.debian.org/debian bookworm/main amd64 libplexus-interpolation-java all 1.26-1 [76.8 kB] Get:170 http://deb.debian.org/debian bookworm/main amd64 libplexus-sec-dispatcher-java all 2.0-3 [28.3 kB] Get:171 http://deb.debian.org/debian bookworm/main amd64 libgeronimo-interceptor-3.0-spec-java all 1.0.1-4 [8484 B] Get:172 http://deb.debian.org/debian bookworm/main amd64 libcdi-api-java all 1.2-3 [54.3 kB] Get:173 http://deb.debian.org/debian bookworm/main amd64 libslf4j-java all 1.7.32-1 [144 kB] Get:174 http://deb.debian.org/debian bookworm/main amd64 libsisu-inject-java all 0.3.4-2 [347 kB] Get:175 http://deb.debian.org/debian bookworm/main amd64 libsisu-plexus-java all 0.3.4-3 [181 kB] Get:176 http://deb.debian.org/debian bookworm/main amd64 libmaven3-core-java all 3.8.7-1 [1572 kB] Get:177 http://deb.debian.org/debian bookworm/main amd64 libmaven-shared-io-java all 3.0.0-4 [33.2 kB] Get:178 http://deb.debian.org/debian bookworm/main amd64 libmaven-file-management-java all 3.0.0-1 [35.1 kB] Get:179 http://deb.debian.org/debian bookworm/main amd64 libcommons-compress-java all 1.22-1 [615 kB] Get:180 http://deb.debian.org/debian bookworm/main amd64 libplexus-io-java all 3.3.1-2 [65.3 kB] Get:181 http://deb.debian.org/debian bookworm/main amd64 libsnappy1v5 amd64 1.1.9-3 [26.0 kB] Get:182 http://deb.debian.org/debian bookworm/main amd64 libsnappy-jni amd64 1.1.8.3-1 [7152 B] Get:183 http://deb.debian.org/debian bookworm/main amd64 libsnappy-java all 1.1.8.3-1 [98.9 kB] Get:184 http://deb.debian.org/debian bookworm/main amd64 libxz-java all 1.9-1 [143 kB] Get:185 http://deb.debian.org/debian bookworm/main amd64 libplexus-archiver-java all 4.6.1-1 [187 kB] Get:186 http://deb.debian.org/debian bookworm/main amd64 libhttpcore-java all 4.4.16-1 [636 kB] Get:187 http://deb.debian.org/debian bookworm/main amd64 libcommons-codec-java all 1.15-1 [292 kB] Get:188 http://deb.debian.org/debian bookworm/main amd64 libhttpclient-java all 4.5.14-1 [1247 kB] Get:189 http://deb.debian.org/debian bookworm/main amd64 libjsoup-java all 1.15.3-1 [431 kB] Get:190 http://deb.debian.org/debian bookworm/main amd64 libwagon-http-java all 3.5.3-1 [49.5 kB] Get:191 http://deb.debian.org/debian bookworm/main amd64 libistack-commons-java all 3.0.6-5 [145 kB] Get:192 http://deb.debian.org/debian bookworm/main amd64 libcodemodel-java all 2.6+jaxb2.3.0.1-10.1 [164 kB] Get:193 http://deb.debian.org/debian bookworm/main amd64 librngom-java all 2.3.0.1-10.1 [290 kB] Get:194 http://deb.debian.org/debian bookworm/main amd64 libtxw2-java all 2.3.0.1-10.1 [134 kB] Get:195 http://deb.debian.org/debian bookworm/main amd64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB] Get:196 http://deb.debian.org/debian bookworm/main amd64 libdtd-parser-java all 1.2-1 [64.9 kB] Get:197 http://deb.debian.org/debian bookworm/main amd64 libjaxb-java all 2.3.0.1-10.1 [1973 kB] Get:198 http://deb.debian.org/debian bookworm/main amd64 libsaaj-java all 1.4.0-3 [37.8 kB] Get:199 http://deb.debian.org/debian bookworm/main amd64 libjaxws-api-java all 2.3.0-1.1 [49.9 kB] Get:200 http://deb.debian.org/debian bookworm/main amd64 libjws-api-java all 1.1-2 [21.2 kB] Get:201 http://deb.debian.org/debian bookworm/main amd64 libknopflerfish-osgi-framework-java all 6.1.1-3.1 [642 kB] Get:202 http://deb.debian.org/debian bookworm/main amd64 libisorelax-java all 20041111-14 [63.4 kB] Get:203 http://deb.debian.org/debian bookworm/main amd64 libxml-commons-external-java all 1.4.01-5 [240 kB] Get:204 http://deb.debian.org/debian bookworm/main amd64 libxerces2-java all 2.12.2-1 [1440 kB] Get:205 http://deb.debian.org/debian bookworm/main amd64 libmsv-java all 2009.1+dfsg1-6 [760 kB] Get:206 http://deb.debian.org/debian bookworm/main amd64 libstax2-api-java all 4.1-1 [152 kB] Get:207 http://deb.debian.org/debian bookworm/main amd64 libwoodstox-java all 1:6.2.1-1 [1124 kB] Get:208 http://deb.debian.org/debian bookworm/main amd64 libmetro-policy-java all 2.7.2-3 [169 kB] Get:209 http://deb.debian.org/debian bookworm/main amd64 libmimepull-java all 1.9.7-2 [67.1 kB] Get:210 http://deb.debian.org/debian bookworm/main amd64 libsaaj-ri-java all 1.4.1-1.1 [461 kB] Get:211 http://deb.debian.org/debian bookworm/main amd64 libjaxws-java all 2.3.0.2-2 [3061 kB] Get:212 http://deb.debian.org/debian bookworm/main amd64 javahelp2 all 2.0.05.ds1-10 [907 kB] Get:213 http://deb.debian.org/debian bookworm/main amd64 libandroid-json-org-java all 20121204-20090211-5 [35.8 kB] Get:214 http://deb.debian.org/debian bookworm/main amd64 libapache-mime4j-java all 0.8.2-1 [415 kB] Get:215 http://deb.debian.org/debian bookworm/main amd64 libcommons-httpclient-java all 3.1-16 [291 kB] Get:216 http://deb.debian.org/debian bookworm/main amd64 libmail-java all 1.6.5-2 [701 kB] Get:217 http://deb.debian.org/debian bookworm/main amd64 libwsdl4j-java all 1.6.3-4.1 [184 kB] Get:218 http://deb.debian.org/debian bookworm/main amd64 libaxis-java all 1.4-28+deb12u1 [1510 kB] Get:219 http://deb.debian.org/debian bookworm/main amd64 libgoogle-gson-java all 2.10-1 [261 kB] Get:220 http://deb.debian.org/debian bookworm/main amd64 libciftools-java all 4.0.5-1 [2139 kB] Get:221 http://deb.debian.org/debian bookworm/main amd64 libcommons-math-java all 2.2-8 [926 kB] Get:222 http://deb.debian.org/debian bookworm/main amd64 libitext5-java all 5.5.13.3-2 [2665 kB] Get:223 http://deb.debian.org/debian bookworm/main amd64 libjackson2-annotations-java all 2.14.0-1 [68.8 kB] Get:224 http://deb.debian.org/debian bookworm/main amd64 libjackson2-core-java all 2.14.1-1 [447 kB] Get:225 http://deb.debian.org/debian bookworm/main amd64 libjackson2-databind-java all 2.14.0-1 [1584 kB] Get:226 http://deb.debian.org/debian bookworm/main amd64 libantlr4-runtime-java all 4.7.2-5 [315 kB] Get:227 http://deb.debian.org/debian bookworm/main amd64 libmaven-archiver-java all 3.6.0-1 [25.1 kB] Get:228 http://deb.debian.org/debian bookworm/main amd64 libmaven-jar-plugin-java all 3.3.0-2 [24.0 kB] Get:229 http://deb.debian.org/debian bookworm/main amd64 libcommons-text-java all 1.10.0-1 [211 kB] Get:230 http://deb.debian.org/debian bookworm/main amd64 libfastutil-java all 8.5.11+dfsg-1 [19.6 MB] Get:231 http://deb.debian.org/debian bookworm/main amd64 libjheaps-java all 0.14-2 [144 kB] Get:232 http://deb.debian.org/debian bookworm/main amd64 libjgraphx-java all 2.1.0.7-3 [807 kB] Get:233 http://deb.debian.org/debian bookworm/main amd64 libjgrapht-java all 1.5.1-3 [1584 kB] Get:234 http://deb.debian.org/debian bookworm/main amd64 libinchi1 amd64 1.03+dfsg-4+b2 [436 kB] Get:235 http://deb.debian.org/debian bookworm/main amd64 libjni-inchi-jni amd64 0.8+dfsg-7 [9064 B] Get:236 http://deb.debian.org/debian bookworm/main amd64 libcommons-exec-java all 1.3-2 [48.1 kB] Get:237 http://deb.debian.org/debian bookworm/main amd64 libexec-maven-plugin-java all 3.1.0-1 [66.2 kB] Get:238 http://deb.debian.org/debian bookworm/main amd64 libmaven-shared-incremental-java all 1.1-3 [9524 B] Get:239 http://deb.debian.org/debian bookworm/main amd64 libcommons-lang-java all 2.6-10 [273 kB] Get:240 http://deb.debian.org/debian bookworm/main amd64 libxbean-reflect-java all 4.5-8 [133 kB] Get:241 http://deb.debian.org/debian bookworm/main amd64 libplexus-container-default-java all 2.1.1-1 [193 kB] Get:242 http://deb.debian.org/debian bookworm/main amd64 libplexus-compiler-java all 2.12.1-1 [99.8 kB] Get:243 http://deb.debian.org/debian bookworm/main amd64 libqdox2-java all 2.0.3-1 [296 kB] Get:244 http://deb.debian.org/debian bookworm/main amd64 libplexus-languages-java all 1.1.1-2 [47.3 kB] Get:245 http://deb.debian.org/debian bookworm/main amd64 libmaven-compiler-plugin-java all 3.10.1-2 [59.0 kB] Get:246 http://deb.debian.org/debian bookworm/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get:247 http://deb.debian.org/debian bookworm/main amd64 libjni-inchi-java all 0.8+dfsg-7 [33.2 kB] Get:248 http://deb.debian.org/debian bookworm/main amd64 libnaga-java all 3.0+svn80-5 [43.5 kB] Get:249 http://deb.debian.org/debian bookworm/main amd64 libjmol-java all 14.32.83+dfsg-2 [8699 kB] Get:250 http://deb.debian.org/debian bookworm/main amd64 libjson-simple-java all 2.3.0-1 [63.8 kB] Get:251 http://deb.debian.org/debian bookworm/main amd64 libmsgpack-java all 0.9.3-1 [155 kB] Get:252 http://deb.debian.org/debian bookworm/main amd64 libmmtf-java all 1.0.11-1 [187 kB] Get:253 http://deb.debian.org/debian bookworm/main amd64 libvecmath-java all 1.5.2-7 [97.0 kB] Get:254 http://deb.debian.org/debian bookworm/main amd64 libbiojava6-java all 6.1.0+dfsg-4 [5367 kB] Get:255 http://deb.debian.org/debian bookworm/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get:256 http://deb.debian.org/debian bookworm/main amd64 libmjson-java all 1.4.0-3 [60.4 kB] Get:257 http://deb.debian.org/debian bookworm/main amd64 libmbedcrypto7 amd64 2.28.3-1 [277 kB] Get:258 http://deb.debian.org/debian bookworm/main amd64 libmbedx509-1 amd64 2.28.3-1 [128 kB] Get:259 http://deb.debian.org/debian bookworm/main amd64 libmbedtls14 amd64 2.28.3-1 [163 kB] Get:260 http://deb.debian.org/debian bookworm/main amd64 ncbi-vdb-data all 3.0.2+dfsg-2 [73.3 kB] Get:261 http://deb.debian.org/debian bookworm/main amd64 libncbi-vdb3 amd64 3.0.2+dfsg-2 [1050 kB] Get:262 http://deb.debian.org/debian bookworm/main amd64 libncbi-ngs3 amd64 3.0.3+dfsg-6~deb12u1 [154 kB] Get:263 http://deb.debian.org/debian bookworm/main amd64 libngs-jni amd64 3.0.3+dfsg-6~deb12u1 [23.5 kB] Get:264 http://deb.debian.org/debian bookworm/main amd64 libngs-java amd64 3.0.3+dfsg-6~deb12u1 [110 kB] Get:265 http://deb.debian.org/debian bookworm/main amd64 librhino-java all 1.7.14-2.1 [1357 kB] Get:266 http://deb.debian.org/debian bookworm/main amd64 libhtsjdk-java all 3.0.4+dfsg-2 [1813 kB] Get:267 http://deb.debian.org/debian bookworm/main amd64 libhttpmime-java all 4.5.14-1 [40.9 kB] Get:268 http://deb.debian.org/debian bookworm/main amd64 libintervalstorej-java all 1.2+dfsg-5 [26.0 kB] Get:269 http://deb.debian.org/debian bookworm/main amd64 libjaba-client-java all 2.2.0-2 [400 kB] Get:270 http://deb.debian.org/debian bookworm/main amd64 libjaxrs-api-java all 2.1.2-2 [115 kB] Get:271 http://deb.debian.org/debian bookworm/main amd64 libjsr311-api-java all 1.1.1-1.1 [46.4 kB] Get:272 http://deb.debian.org/debian bookworm/main amd64 libjersey1-core-java all 1.19.3-8 [392 kB] Get:273 http://deb.debian.org/debian bookworm/main amd64 libjersey1-client-java all 1.19.3-8 [128 kB] Get:274 http://deb.debian.org/debian bookworm/main amd64 libel-api-java all 3.0.0-3 [64.9 kB] Get:275 http://deb.debian.org/debian bookworm/main amd64 libwebsocket-api-java all 1.1-2 [40.1 kB] Get:276 http://deb.debian.org/debian bookworm/main amd64 libjetty9-java all 9.4.50-4+deb12u3 [2981 kB] Get:277 http://deb.debian.org/debian bookworm/main amd64 libjfreesvg-java all 4.1-2 [44.1 kB] Get:278 http://deb.debian.org/debian bookworm/main amd64 libjswingreader-java all 0.3-3 [80.3 kB] Get:279 http://deb.debian.org/debian bookworm/main amd64 liblightcouch-java all 0.2.0-1 [75.0 kB] Get:280 http://deb.debian.org/debian bookworm/main amd64 libmongodb-java all 3.6.3-2 [1901 kB] Get:281 http://deb.debian.org/debian bookworm/main amd64 liblog4j2-java all 2.19.0-2 [2310 kB] Get:282 http://deb.debian.org/debian bookworm/main amd64 libmiglayout-java all 5.1-3 [133 kB] Get:283 http://deb.debian.org/debian bookworm/main amd64 libcastor-core-java all 1.3.2-7 [54.0 kB] Get:284 http://deb.debian.org/debian bookworm/main amd64 libcastor-xml-java all 1.3.2-7 [736 kB] Get:285 http://deb.debian.org/debian bookworm/main amd64 libvamsas-client-java all 0.2+dfsg-2 [584 kB] Get:286 http://deb.debian.org/debian bookworm/main amd64 varna all 3-93+ds-4 [790 kB] Get:287 http://deb.debian.org/debian bookworm/main amd64 jalview all 2.11.2.5+dfsg-3 [7771 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 246 MB in 7s (34.1 MB/s) Selecting previously unselected package libssl3:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6093 files and directories currently installed.) Preparing to unpack .../000-libssl3_3.0.14-1~deb12u1_amd64.deb ... Unpacking libssl3:amd64 (3.0.14-1~deb12u1) ... Selecting previously unselected package openssl. Preparing to unpack .../001-openssl_3.0.14-1~deb12u1_amd64.deb ... Unpacking openssl (3.0.14-1~deb12u1) ... Selecting previously unselected package ca-certificates. 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Unpacking libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../008-shared-mime-info_2.2-1_amd64.deb ... Unpacking shared-mime-info (2.2-1) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../009-libjpeg62-turbo_1%3a2.1.5-2_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-2) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../010-libpng16-16_1.6.39-2_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.39-2) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../011-libdeflate0_1.14-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.14-1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../012-libjbig0_2.1-6.1_amd64.deb ... Unpacking libjbig0:amd64 (2.1-6.1) ... Selecting previously unselected package liblerc4:amd64. Preparing to unpack .../013-liblerc4_4.0.0+ds-2_amd64.deb ... Unpacking liblerc4:amd64 (4.0.0+ds-2) ... Selecting previously unselected package libwebp7:amd64. Preparing to unpack .../014-libwebp7_1.2.4-0.2+deb12u1_amd64.deb ... Unpacking libwebp7:amd64 (1.2.4-0.2+deb12u1) ... Selecting previously unselected package libtiff6:amd64. Preparing to unpack .../015-libtiff6_4.5.0-6+deb12u1_amd64.deb ... Unpacking libtiff6:amd64 (4.5.0-6+deb12u1) ... Selecting previously unselected package libgdk-pixbuf-2.0-0:amd64. Preparing to unpack .../016-libgdk-pixbuf-2.0-0_2.42.10+dfsg-1+deb12u1_amd64.deb ... Unpacking libgdk-pixbuf-2.0-0:amd64 (2.42.10+dfsg-1+deb12u1) ... Selecting previously unselected package gtk-update-icon-cache. Preparing to unpack .../017-gtk-update-icon-cache_3.24.38-2~deb12u2_amd64.deb ... Unpacking gtk-update-icon-cache (3.24.38-2~deb12u2) ... Selecting previously unselected package adwaita-icon-theme. Preparing to unpack .../018-adwaita-icon-theme_43-1_all.deb ... Unpacking adwaita-icon-theme (43-1) ... Selecting previously unselected package ca-certificates-java. Preparing to unpack .../019-ca-certificates-java_20230710~deb12u1_all.deb ... Unpacking ca-certificates-java (20230710~deb12u1) ... Selecting previously unselected package java-common. Preparing to unpack .../020-java-common_0.74_all.deb ... Unpacking java-common (0.74) ... Selecting previously unselected package libavahi-common-data:amd64. Preparing to unpack .../021-libavahi-common-data_0.8-10_amd64.deb ... Unpacking libavahi-common-data:amd64 (0.8-10) ... Selecting previously unselected package libavahi-common3:amd64. Preparing to unpack .../022-libavahi-common3_0.8-10_amd64.deb ... Unpacking libavahi-common3:amd64 (0.8-10) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../023-libdbus-1-3_1.14.10-1~deb12u1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.14.10-1~deb12u1) ... Selecting previously unselected package libavahi-client3:amd64. Preparing to unpack .../024-libavahi-client3_0.8-10_amd64.deb ... Unpacking libavahi-client3:amd64 (0.8-10) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../025-libkrb5support0_1.20.1-2+deb12u2_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-2+deb12u2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../026-libk5crypto3_1.20.1-2+deb12u2_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-2+deb12u2) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../027-libkeyutils1_1.6.3-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-2) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../028-libkrb5-3_1.20.1-2+deb12u2_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-2+deb12u2) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../029-libgssapi-krb5-2_1.20.1-2+deb12u2_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-2+deb12u2) ... Selecting previously unselected package libcups2:amd64. Preparing to unpack .../030-libcups2_2.4.2-3+deb12u7_amd64.deb ... Unpacking libcups2:amd64 (2.4.2-3+deb12u7) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../031-libexpat1_2.5.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../032-libbrotli1_1.0.9-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b6) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../033-libfreetype6_2.12.1+dfsg-5+deb12u3_amd64.deb ... Unpacking libfreetype6:amd64 (2.12.1+dfsg-5+deb12u3) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../034-fonts-dejavu-core_2.37-6_all.deb ... Unpacking fonts-dejavu-core (2.37-6) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../035-fontconfig-config_2.14.1-4_amd64.deb ... Unpacking fontconfig-config (2.14.1-4) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../036-libfontconfig1_2.14.1-4_amd64.deb ... Unpacking libfontconfig1:amd64 (2.14.1-4) ... Selecting previously unselected package liblcms2-2:amd64. Preparing to unpack .../037-liblcms2-2_2.14-2_amd64.deb ... Unpacking liblcms2-2:amd64 (2.14-2) ... Selecting previously unselected package libnspr4:amd64. Preparing to unpack .../038-libnspr4_2%3a4.35-1_amd64.deb ... Unpacking libnspr4:amd64 (2:4.35-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../039-libsqlite3-0_3.40.1-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.40.1-2) ... Selecting previously unselected package libnss3:amd64. Preparing to unpack .../040-libnss3_2%3a3.87.1-1_amd64.deb ... Unpacking libnss3:amd64 (2:3.87.1-1) ... Selecting previously unselected package libasound2-data. Preparing to unpack .../041-libasound2-data_1.2.8-1_all.deb ... Unpacking libasound2-data (1.2.8-1) ... Selecting previously unselected package libasound2:amd64. Preparing to unpack .../042-libasound2_1.2.8-1+b1_amd64.deb ... Unpacking libasound2:amd64 (1.2.8-1+b1) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../043-libgraphite2-3_1.3.14-1_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-1) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../044-libharfbuzz0b_6.0.0+dfsg-3_amd64.deb ... Unpacking libharfbuzz0b:amd64 (6.0.0+dfsg-3) ... Selecting previously unselected package libpcsclite1:amd64. Preparing to unpack .../045-libpcsclite1_1.9.9-2_amd64.deb ... Unpacking libpcsclite1:amd64 (1.9.9-2) ... Selecting previously unselected package openjdk-17-jre-headless:amd64. Preparing to unpack .../046-openjdk-17-jre-headless_17.0.12+7-2~deb12u1_amd64.deb ... Unpacking openjdk-17-jre-headless:amd64 (17.0.12+7-2~deb12u1) ... Selecting previously unselected package default-jre-headless. Preparing to unpack .../047-default-jre-headless_2%3a1.17-74_amd64.deb ... Unpacking default-jre-headless (2:1.17-74) ... Selecting previously unselected package ant. Preparing to unpack .../048-ant_1.10.13-1_all.deb ... Unpacking ant (1.10.13-1) ... Selecting previously unselected package ant-optional. Preparing to unpack .../049-ant-optional_1.10.13-1_all.deb ... Unpacking ant-optional (1.10.13-1) ... Selecting previously unselected package libantlr-java. Preparing to unpack .../050-libantlr-java_2.7.7+dfsg-12_all.deb ... Unpacking libantlr-java (2.7.7+dfsg-12) ... Selecting previously unselected package antlr. Preparing to unpack .../051-antlr_2.7.7+dfsg-12_all.deb ... Unpacking antlr (2.7.7+dfsg-12) ... Selecting previously unselected package at-spi2-common. Preparing to unpack .../052-at-spi2-common_2.46.0-5_all.deb ... 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Setting up libpciaccess0:amd64 (0.17-2) ... Setting up libslf4j-java (1.7.32-1) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libplexus-utils2-java (3.4.2-1) ... Setting up libkeyutils1:amd64 (1.6.3-2) ... Setting up libmiglayout-java (5.1-3) ... Setting up libplexus-classworlds-java (2.7.0-1) ... Setting up libqdox-java (1.12.1-3) ... Setting up libicu72:amd64 (72.1-3) ... Setting up liblerc4:amd64 (4.0.0+ds-2) ... Setting up libjsr305-java (0.1~+svn49-11) ... Setting up libjws-api-java (1.1-2) ... Setting up hicolor-icon-theme (0.17-2) ... Setting up java-common (0.74) ... Setting up libgmbal-pfl-java (4.0.1-b003-2) ... Setting up libdatrie1:amd64 (0.2.13-2+b1) ... Setting up libqdox2-java (2.0.3-1) ... Setting up libaopalliance-java (20070526-7) ... Setting up libcommons-cli-java (1.5.0-1) ... Setting up libjheaps-java (0.14-2) ... Setting up libcommons-exec-java (1.3-2) ... Setting up libvecmath-java (1.5.2-7) ... Setting up libglib2.0-0:amd64 (2.74.6-2+deb12u3) ... No schema files found: doing nothing. Setting up libglvnd0:amd64 (1.6.0-1) ... Setting up libgoogle-gson-java (2.10-1) ... Setting up libjsr311-api-java (1.1.1-1.1) ... Setting up libmjson-java (1.4.0-3) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up libsqlite3-0:amd64 (3.40.1-2) ... Setting up libgdk-pixbuf2.0-common (2.42.10+dfsg-1+deb12u1) ... Setting up libasm-java (9.4-1) ... Setting up libssl3:amd64 (3.0.14-1~deb12u1) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libsensors-config (1:3.6.0-7.1) ... Setting up libdeflate0:amd64 (1.14-1) ... Setting up liblog4j1.2-java (1.2.17-11) ... Setting up libel-api-java (3.0.0-3) ... Setting up libplexus-component-annotations-java (2.1.1-1) ... Setting up libantlr4-runtime-java (4.7.2-5) ... Setting up libjson-simple-java (2.3.0-1) ... Setting up libwsdl4j-java (1.6.3-4.1) ... Setting up libjbig0:amd64 (2.1-6.1) ... Setting up libstax2-api-java (4.1-1) ... Setting up libsnappy1v5:amd64 (1.1.9-3) ... Setting up libkrb5support0:amd64 (1.20.1-2+deb12u2) ... Setting up libexec-maven-plugin-java (3.1.0-1) ... Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... Setting up libgeronimo-interceptor-3.0-spec-java (1.0.1-4) ... Setting up libasound2-data (1.2.8-1) ... Setting up libandroid-json-org-java (20121204-20090211-5) ... Setting up librhino-java (1.7.14-2.1) ... Setting up libz3-4:amd64 (4.8.12-3.1) ... Setting up libbsf-java (1:2.4.0-8) ... Setting up libjersey1-core-java (1.19.3-8) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-2) ... Setting up libjaxen-java (1.1.6-4) ... Setting up libmbedcrypto7:amd64 (2.28.3-1) ... Setting up libx11-data (2:1.8.4-2+deb12u2) ... Setting up libnspr4:amd64 (2:4.35-1) ... Setting up libjansi-java (2.4.0-2) ... Setting up libapache-pom-java (29-2) ... Setting up libavahi-common-data:amd64 (0.8-10) ... Setting up libxpp3-java (1.1.4c-3) ... Setting up libatinject-jsr330-api-java (1.0+ds1-5) ... Setting up libdbus-1-3:amd64 (1.14.10-1~deb12u1) ... Setting up libwebsocket-api-java (1.1-2) ... Setting up libfribidi0:amd64 (1.0.8-2.1) ... Setting up libplexus-interpolation-java (1.26-1) ... Setting up libpng16-16:amd64 (1.6.39-2) ... Setting up libitext5-java (5.5.13.3-2) ... Setting up libxml-commons-resolver1.1-java (1.2-11) ... Setting up libxz-java (1.9-1) ... Setting up fonts-dejavu-core (2.37-6) ... Setting up libpcsclite1:amd64 (1.9.9-2) ... Setting up libsensors5:amd64 (1:3.6.0-7.1) ... Setting up libintervalstorej-java (1.2+dfsg-5) ... Setting up libmongodb-java (3.6.3-2) ... Setting up libk5crypto3:amd64 (1.20.1-2+deb12u2) ... Setting up libisorelax-java (20041111-14) ... Setting up libactivation-java (1.2.0-2) ... Setting up libhamcrest-java (2.2-1) ... Setting up libglapi-mesa:amd64 (22.3.6-1+deb12u1) ... Setting up libjsp-api-java (2.3.4-3) ... Setting up libmimepull-java (1.9.7-2) ... Setting up libwebp7:amd64 (1.2.4-0.2+deb12u1) ... Setting up libgif7:amd64 (5.2.1-2.5) ... Setting up libjfreesvg-java (4.1-2) ... Setting up libxshmfence1:amd64 (1.3-1) ... Setting up libjsoup-java (1.15.3-1) ... Setting up libmail-java (1.6.5-2) ... Setting up at-spi2-common (2.46.0-5) ... Setting up libcommons-math-java (2.2-8) ... Setting up libtiff6:amd64 (4.5.0-6+deb12u1) ... Setting up libxml-commons-external-java (1.4.01-5) ... Setting up libxbean-reflect-java (4.5-8) ... Setting up libasound2:amd64 (1.2.8-1+b1) ... Setting up libservlet-api-java (4.0.1-2) ... Setting up libjackson2-core-java (2.14.1-1) ... Setting up ncbi-vdb-data (3.0.2+dfsg-2) ... Setting up libthai-data (0.1.29-1) ... Setting up libgtk2.0-common (2.24.33-2+deb12u1) ... Setting up libatk1.0-0:amd64 (2.46.0-5) ... Setting up libkrb5-3:amd64 (1.20.1-2+deb12u2) ... Setting up libhttpcore-java (4.4.16-1) ... Setting up libxerces2-java (2.12.2-1) ... Setting up libgmbal-java (4.0.0-b002-1.1) ... Setting up librelaxng-datatype-java (1.0+ds1-3.1) ... Setting up libantlr-java (2.7.7+dfsg-12) ... Setting up openssl (3.0.14-1~deb12u1) ... Setting up libbsd0:amd64 (0.11.7-2) ... Setting up libdrm-common (2.4.114-1) ... Setting up libcdi-api-java (1.2-3) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libsnappy-jni (1.1.8.3-1) ... Setting up libapache-mime4j-java (0.8.2-1) ... Setting up libhawtjni-runtime-java (1.18-1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ... Setting up libargs4j-java (2.33-2) ... Setting up libinchi1 (1.03+dfsg-4+b2) ... Setting up libsaaj-java (1.4.0-3) ... Setting up libnaga-java (3.0+svn80-5) ... Setting up libdom4j-java (2.1.3-2) ... Setting up libjaxb-api-java (2.3.1-1) ... Setting up libwagon-provider-api-java (3.5.3-1) ... Setting up libxstream-java (1.4.20-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up libjetty9-java (9.4.50-4+deb12u3) ... Setting up libxcb-xfixes0:amd64 (1.15-1) ... Setting up libjersey1-client-java (1.19.3-8) ... Setting up libmbedx509-1:amd64 (2.28.3-1) ... Setting up libplexus-languages-java (1.1.1-2) ... Setting up libmbedtls14:amd64 (2.28.3-1) ... Setting up libxcb-render0:amd64 (1.15-1) ... Setting up fontconfig-config (2.14.1-4) ... Setting up libstax-ex-java (1.7.8-3) ... Setting up libxcb-glx0:amd64 (1.15-1) ... Setting up libmaven-parent-java (35-1) ... Setting up libedit2:amd64 (3.1-20221030-2) ... Setting up libcommons-parent-java (56-1) ... Setting up libavahi-common3:amd64 (0.8-10) ... Setting up libncbi-vdb3:amd64 (3.0.2+dfsg-2) ... Setting up libcommons-logging-java (1.2-3) ... Setting up libsisu-inject-java (0.3.4-2) ... Setting up libnss3:amd64 (2:3.87.1-1) ... Setting up libxcb-shm0:amd64 (1.15-1) ... Setting up libciftools-java (4.0.5-1) ... Setting up libjaxws-api-java (2.3.0-1.1) ... Setting up libcommons-lang-java (2.6-10) ... Setting up libjackson2-databind-java (2.14.0-1) ... Setting up libplexus-cipher-java (2.0-1) ... Setting up libxcb-present0:amd64 (1.15-1) ... Setting up libcastor-core-java (1.3.2-7) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up libthai0:amd64 (0.1.29-1) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libsisu-plexus-java (0.3.4-3) ... Setting up libfreetype6:amd64 (2.12.1+dfsg-5+deb12u3) ... Setting up libxcb-sync1:amd64 (1.15-1) ... Setting up libcastor-xml-java (1.3.2-7) ... Setting up shared-mime-info (2.2-1) ... Setting up libstreambuffer-java (1.5.4-1.1) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-2+deb12u2) ... Setting up libjswingreader-java (0.3-3) ... Setting up libcommons-discovery-java (0.5-4) ... Setting up libcommons-lang3-java (3.12.0-2) ... Setting up libxcb-dri2-0:amd64 (1.15-1) ... Setting up librngom-java (2.3.0.1-10.1) ... Setting up libdrm2:amd64 (2.4.114-1+b1) ... Setting up libjni-inchi-jni (0.8+dfsg-7) ... Setting up libjansi-native-java (1.8-1) ... Setting up libjgraphx-java (2.1.0.7-3) ... Setting up libxcb-randr0:amd64 (1.15-1) ... Setting up libllvm15:amd64 (1:15.0.6-4+b1) ... Setting up libjansi1-java (1.18-3) ... Setting up libplexus-sec-dispatcher-java (2.0-3) ... Setting up libx11-6:amd64 (2:1.8.4-2+deb12u2) ... Setting up libharfbuzz0b:amd64 (6.0.0+dfsg-3) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.10+dfsg-1+deb12u1) ... Setting up libsnappy-java (1.1.8.3-1) ... Setting up libfontconfig1:amd64 (2.14.1-4) ... Setting up libxsom-java (2.3.0.1-10.1) ... Setting up ca-certificates-java (20230710~deb12u1) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-codec-java (1.15-1) ... Setting up libjline2-java (2.14.6-5) ... Setting up libxcomposite1:amd64 (1:0.4.5-1) ... Setting up libavahi-client3:amd64 (0.8-10) ... Setting up libdrm-amdgpu1:amd64 (2.4.114-1+b1) ... Setting up libsaaj-ri-java (1.4.1-1.1) ... Setting up libncbi-ngs3:amd64 (3.0.3+dfsg-6~deb12u1) ... Setting up libxcb-dri3-0:amd64 (1.15-1) ... Setting up gtk-update-icon-cache (3.24.38-2~deb12u2) ... Setting up libx11-xcb1:amd64 (2:1.8.4-2+deb12u2) ... Setting up fontconfig (2.14.1-4) ... Regenerating fonts cache... done. Setting up libngs-jni:amd64 (3.0.3+dfsg-6~deb12u1) ... Setting up libdrm-nouveau2:amd64 (2.4.114-1+b1) ... Setting up libxdamage1:amd64 (1:1.1.6-1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libcommons-compress-java (1.22-1) ... Setting up libcommons-io-java (2.11.0-2) ... Setting up libdrm-radeon1:amd64 (2.4.114-1+b1) ... Setting up libpango-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libdrm-intel1:amd64 (2.4.114-1+b1) ... Setting up libgl1-mesa-dri:amd64 (22.3.6-1+deb12u1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libvamsas-client-java (0.2+dfsg-2) ... Setting up libcairo2:amd64 (1.16.0-7) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libmaven-resolver-java (1.6.3-1) ... Setting up adwaita-icon-theme (43-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libxfixes3:amd64 (1:6.0.0-2) ... Setting up libcommons-httpclient-java (3.1-16) ... Setting up libxinerama1:amd64 (2:1.1.4-3) ... Setting up libaxis-java (1.4-28+deb12u1) ... Setting up libxrandr2:amd64 (2:1.5.2-2+b1) ... Setting up libcups2:amd64 (2.4.2-3+deb12u7) ... Setting up libhttpclient-java (4.5.14-1) ... Setting up liblightcouch-java (0.2.0-1) ... Setting up libwagon-http-java (3.5.3-1) ... Setting up libmaven-shared-utils-java (3.3.4-1) ... Setting up libfastinfoset-java (1.2.12-3) ... Setting up libngs-java:amd64 (3.0.3+dfsg-6~deb12u1) ... Setting up libpangoft2-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libhtsjdk-java (3.0.4+dfsg-2) ... Setting up libpangocairo-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libplexus-io-java (3.3.1-2) ... Setting up libglx-mesa0:amd64 (22.3.6-1+deb12u1) ... Setting up libxi6:amd64 (2:1.8-1+b1) ... Setting up libglx0:amd64 (1.6.0-1) ... Setting up libxtst6:amd64 (2:1.2.3-1.1) ... Setting up liblog4j2-java (2.19.0-2) ... Setting up libxcursor1:amd64 (1:1.2.1-1) ... Setting up libgl1:amd64 (1.6.0-1) ... Setting up libhttpmime-java (4.5.14-1) ... Setting up openjdk-17-jre-headless:amd64 (17.0.12+7-2~deb12u1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libplexus-archiver-java (4.6.1-1) ... Setting up libgtk2.0-0:amd64 (2.24.33-2+deb12u1) ... Setting up libmaven-archiver-java (3.6.0-1) ... Setting up liberror-prone-java (2.18.0-1) ... Setting up libguava-java (31.1-1) ... Setting up libplexus-container-default-java (2.1.1-1) ... Setting up libguice-java (4.2.3-2) ... Setting up libmaven3-core-java (3.8.7-1) ... Setting up libmaven-shared-incremental-java (1.1-3) ... Setting up libmaven-shared-io-java (3.0.0-4) ... Setting up libplexus-compiler-java (2.12.1-1) ... Setting up libmaven-compiler-plugin-java (3.10.1-2) ... Setting up libjni-inchi-java (0.8+dfsg-7) ... Setting up libmaven-file-management-java (3.0.0-1) ... Setting up libjmol-java (14.32.83+dfsg-2) ... Setting up libmaven-jar-plugin-java (3.3.0-2) ... Setting up libcommons-text-java (1.10.0-1) ... Setting up libmsgpack-java (0.9.3-1) ... Setting up libmmtf-java (1.0.11-1) ... Setting up libjgrapht-java (1.5.1-3) ... Processing triggers for libc-bin (2.36-9+deb12u8) ... Processing triggers for ca-certificates-java (20230710~deb12u1) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068_2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:E-Tugra_Global_Root_CA_ECC_v3.pem Adding debian:E-Tugra_Global_Root_CA_RSA_v3.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustCor_ECA-1.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up antlr (2.7.7+dfsg-12) ... Setting up ivy (2.5.1-2) ... Setting up ant (1.10.13-1) ... Setting up libmsv-java (2009.1+dfsg1-6) ... Setting up junit4 (4.13.2-3) ... Setting up groovy (2.4.21-8) ... update-alternatives: using /usr/share/groovy/bin/groovy to provide /usr/bin/groovy (groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyc to provide /usr/bin/groovyc (groovyc) in auto mode update-alternatives: using /usr/share/groovy/bin/grape to provide /usr/bin/grape (grape) in auto mode update-alternatives: using /usr/share/groovy/bin/startGroovy to provide /usr/bin/startGroovy (startGroovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovysh to provide /usr/bin/groovysh (groovysh) in auto mode update-alternatives: using /usr/share/groovy/bin/java2groovy to provide /usr/bin/java2groovy (java2groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyConsole to provide /usr/bin/groovyConsole (groovyConsole) in auto mode update-alternatives: using /usr/share/groovy/bin/groovydoc to provide /usr/bin/groovydoc (groovydoc) in auto mode Setting up default-jre-headless (2:1.17-74) ... Setting up openjdk-17-jre:amd64 (17.0.12+7-2~deb12u1) ... Setting up varna (3-93+ds-4) ... Setting up default-jre (2:1.17-74) ... Setting up ant-optional (1.10.13-1) ... Setting up libwoodstox-java (1:6.2.1-1) ... Setting up javahelp2 (2.0.05.ds1-10) ... Setting up libistack-commons-java (3.0.6-5) ... Setting up libcodemodel-java (2.6+jaxb2.3.0.1-10.1) ... Setting up libtxw2-java (2.3.0.1-10.1) ... Setting up libjaxb-java (2.3.0.1-10.1) ... Setting up libmetro-policy-java (2.7.2-3) ... Setting up libbiojava6-java (6.1.0+dfsg-4) ... Setting up libjaba-client-java (2.2.0-2) ... Setting up libjaxws-java (2.3.0.2-2) ... Setting up jalview (2.11.2.5+dfsg-3) ... Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20230710~deb12u1) ... done. 0m27.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-y', 'install', 'jalview'] 0m27.8s INFO: Running scripts post_install 0m27.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_install_exceptions'] 0m27.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_install_exceptions'] 0m27.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 0m28.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 0m28.5s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpnyhxg0b0 to testing 0m28.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m28.5s INFO: Running scripts pre_distupgrade 0m28.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m28.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m28.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m28.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m28.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m28.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m28.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m28.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m28.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m28.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m28.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'update'] 0m30.3s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [169 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9305 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6211 kB] Fetched 15.7 MB in 1s (12.4 MB/s) Reading package lists... 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'update'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-yf', 'dist-upgrade'] 0m54.0s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libdrm-nouveau2 libinchi1 libllvm15 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libapt-pkg6.0 libasound2 libatk1.0-0 libcups2 libdb5.3 libelf1 libext2fs2 libglib2.0-0 libgnutls30 libgtk2.0-0 libhogweed6 libmbedcrypto7 libmbedtls14 libmbedx509-1 libnettle8 libpng16-16 libssl3 The following NEW packages will be installed: dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service fonts-dejavu-mono gcc-14-base libapfloat-java libapparmor1 libapt-pkg6.0t64 libasound2t64 libatk-bridge2.0-0t64 libatk1.0-0t64 libatomic1 libatspi2.0-0t64 libcairo-gobject2 libcloudproviders0 libcolord2 libcups2t64 libdb5.3t64 libdconf1 libelf1t64 libepoxy0 libext2fs2t64 libgbm1 libglib2.0-0t64 libgnutls30t64 libgtk-3-0t64 libgtk-3-common libgtk2.0-0t64 libhogweed6t64 libinchi1.07 libllvm18 libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libncursesw6 libnettle8t64 libpam-systemd libpng16-16t64 libproc2-0 libsharpyuv0 libssl3t64 libsystemd-shared libunistring5 libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 libxkbcommon0 login.defs mesa-libgallium openjdk-21-jre openjdk-21-jre-headless openssl-provider-legacy procps systemd systemd-sysv xkb-data The following packages will be upgraded: adduser adwaita-icon-theme ant ant-optional antlr apt at-spi2-common base-files base-passwd bash bsdutils ca-certificates ca-certificates-java coreutils dash debconf debian-archive-keyring debianutils default-jre default-jre-headless diffutils dpkg e2fsprogs findutils fontconfig fontconfig-config fonts-dejavu-core gcc-12-base gpgv grep groovy gtk-update-icon-cache gzip hicolor-icon-theme hostname init-system-helpers ivy jalview java-common junit4 libacl1 libantlr-java libantlr4-runtime-java libapache-mime4j-java libasm-java libasound2-data libattr1 libaudit-common libaudit1 libavahi-client3 libavahi-common-data libavahi-common3 libaxis-java libblkid1 libbrotli1 libbsd0 libbz2-1.0 libc-bin libc6 libcairo2 libcap-ng0 libcap2 libciftools-java libcom-err2 libcommons-cli-java libcommons-codec-java libcommons-compress-java libcommons-io-java libcommons-lang3-java libcommons-logging-java libcommons-text-java libcrypt1 libdatrie1 libdbus-1-3 libdebconfclient0 libdeflate0 libdom4j-java libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libexec-maven-plugin-java libexpat1 libfastutil-java libffi8 libfontconfig1 libfreetype6 libfribidi0 libgcc-s1 libgcrypt20 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgmp10 libgoogle-gson-java libgpg-error0 libgraphite2-3 libgssapi-krb5-2 libgtk2.0-common libguava-java libhamcrest-java libharfbuzz0b libhtsjdk-java libicu72 libidn2-0 libitext5-java libjansi-java libjansi-native-java libjbig0 libjetty9-java libjgrapht-java libjgraphx-java libjmol-java libjni-inchi-java libjni-inchi-jni libjpeg62-turbo libjswingreader-java libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 liblerc4 liblz4-1 liblzma5 libmaven-shared-incremental-java libmaven3-core-java libmd0 libmetro-policy-java libmiglayout-java libmount1 libmsgpack-java libncbi-ngs3 libncbi-vdb3 libngs-java libngs-jni libnspr4 libnss3 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcre2-8-0 libpcsclite1 libpixman-1-0 libplexus-compiler-java libsaaj-java libseccomp2 libselinux1 libsemanage-common libsemanage2 libsensors-config libsensors5 libsepol2 libsmartcols1 libsnappy-java libsnappy-jni libsnappy1v5 libsqlite3-0 libss2 libstdc++6 libsystemd0 libtasn1-6 libthai-data libthai0 libtiff6 libtinfo6 libudev1 libuuid1 libwebp7 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxfixes3 libxi6 libxinerama1 libxml-commons-external-java libxml2 libxrandr2 libxrender1 libxshmfence1 libxtst6 libxxhash0 libz3-4 libzstd1 login logsave mawk mount ncurses-base ncurses-bin openjdk-17-jre openjdk-17-jre-headless openssl passwd perl-base sed shared-mime-info sysvinit-utils tar tzdata usr-is-merged util-linux util-linux-extra varna x11-common zlib1g 236 upgraded, 63 newly installed, 17 to remove and 0 not upgraded. Need to get 297 MB of archives. After this operation, 413 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 base-files amd64 13.5 [72.8 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libc6 amd64 2.40-2 [2791 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libc-bin amd64 2.40-2 [613 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 gcc-14-base amd64 14.2.0-3 [46.2 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libgcc-s1 amd64 14.2.0-3 [72.8 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 debianutils amd64 5.20 [89.5 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 bash amd64 5.2.32-1+b1 [1500 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libcap2 amd64 1:2.66-5 [27.4 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libsystemd0 amd64 256.6-1 [381 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.2-8 [105 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libgmp10 amd64 2:6.3.0+dfsg-2+b1 [559 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libzstd1 amd64 1.5.6+dfsg-1 [303 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 openssl amd64 3.3.2-1 [1381 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:20 http://deb.debian.org/debian trixie/main amd64 libssl3t64 amd64 3.3.2-1 [2271 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 openssl-provider-legacy amd64 3.3.2-1 [298 kB] Get:22 http://deb.debian.org/debian trixie/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1 [87.9 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 coreutils amd64 9.4-3.1 [2950 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 dash amd64 0.5.12-9 [93.2 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 diffutils amd64 1:3.10-1 [375 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 libgpg-error0 amd64 1.50-4 [81.6 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 libgcrypt20 amd64 1.11.0-6 [843 kB] Get:28 http://deb.debian.org/debian trixie/main amd64 libstdc++6 amd64 14.2.0-3 [713 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libnettle8t64 amd64 3.10-1 [303 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 libhogweed6t64 amd64 3.10-1 [334 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libp11-kit0 amd64 0.25.5-2 [424 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.2-1 [425 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libgnutls30t64 amd64 3.8.6-2 [1444 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 libcups2t64 amd64 2.4.10-2 [251 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14.2.0-3 [9288 B] Get:36 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.2-8 [168 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.2-8 [199 kB] Get:38 http://deb.debian.org/debian trixie/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get:39 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 9.0.0-1 [474 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 ca-certificates all 20240203 [158 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 openjdk-17-jre-headless amd64 17.0.13~6ea-1 [43.9 MB] Get:43 http://deb.debian.org/debian trixie/main amd64 libatspi2.0-0t64 amd64 2.54.0-1 [76.4 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 libatk-bridge2.0-0t64 amd64 2.54.0-1 [67.6 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1 [139 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get:50 http://deb.debian.org/debian trixie/main amd64 libcairo-gobject2 amd64 1.18.2-2 [130 kB] Get:51 http://deb.debian.org/debian trixie/main amd64 libcloudproviders0 amd64 0.3.6-1 [28.9 kB] Get:52 http://deb.debian.org/debian trixie/main amd64 libcolord2 amd64 1.4.7-1+b1 [139 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 libepoxy0 amd64 1.5.10-2 [193 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libwayland-client0 amd64 1.23.0-1 [26.4 kB] Get:55 http://deb.debian.org/debian trixie/main amd64 libwayland-cursor0 amd64 1.23.0-1 [11.3 kB] Get:56 http://deb.debian.org/debian trixie/main amd64 libwayland-egl1 amd64 1.23.0-1 [5392 B] Get:57 http://deb.debian.org/debian trixie/main amd64 xkb-data all 2.42-1 [790 kB] Get:58 http://deb.debian.org/debian trixie/main amd64 libxkbcommon0 amd64 1.6.0-1+b1 [109 kB] Get:59 http://deb.debian.org/debian trixie/main amd64 libdbus-1-3 amd64 1.14.10-4+b1 [203 kB] Get:60 http://deb.debian.org/debian trixie/main amd64 dbus-bin amd64 1.14.10-4+b1 [106 kB] Get:61 http://deb.debian.org/debian trixie/main amd64 dbus-session-bus-common all 1.14.10-4 [79.0 kB] Get:62 http://deb.debian.org/debian trixie/main amd64 libapparmor1 amd64 3.1.7-1+b1 [42.0 kB] Get:63 http://deb.debian.org/debian trixie/main amd64 dbus-daemon amd64 1.14.10-4+b1 [185 kB] Get:64 http://deb.debian.org/debian trixie/main amd64 libsystemd-shared amd64 256.6-1 [2061 kB] Get:65 http://deb.debian.org/debian trixie/main amd64 systemd amd64 256.6-1 [3488 kB] Get:66 http://deb.debian.org/debian trixie/main amd64 dbus-system-bus-common all 1.14.10-4 [80.1 kB] Get:67 http://deb.debian.org/debian trixie/main amd64 usr-is-merged all 39 [5572 B] Get:68 http://deb.debian.org/debian trixie/main amd64 dbus amd64 1.14.10-4+b1 [98.6 kB] Get:69 http://deb.debian.org/debian trixie/main amd64 systemd-sysv amd64 256.6-1 [58.2 kB] Get:70 http://deb.debian.org/debian trixie/main amd64 libpam-systemd amd64 256.6-1 [278 kB] Get:71 http://deb.debian.org/debian trixie/main amd64 dbus-user-session amd64 1.14.10-4+b1 [79.1 kB] Get:72 http://deb.debian.org/debian trixie/main amd64 libdconf1 amd64 0.40.0-4+b2 [41.9 kB] Get:73 http://deb.debian.org/debian trixie/main amd64 libtinfo6 amd64 6.5-2 [344 kB] Get:74 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5-2 [135 kB] Get:75 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get:76 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get:77 http://deb.debian.org/debian trixie/main amd64 dconf-service amd64 0.40.0-4+b2 [32.4 kB] Get:78 http://deb.debian.org/debian trixie/main amd64 dconf-gsettings-backend amd64 0.40.0-4+b2 [28.7 kB] Get:79 http://deb.debian.org/debian trixie/main amd64 libgtk-3-common all 3.24.43-4 [4657 kB] Get:80 http://deb.debian.org/debian trixie/main amd64 libgtk-3-0t64 amd64 3.24.43-4 [2754 kB] Get:81 http://deb.debian.org/debian trixie/main amd64 libasound2-data all 1.2.12-1 [21.0 kB] Get:82 http://deb.debian.org/debian trixie/main amd64 libasound2t64 amd64 1.2.12-1 [369 kB] Get:83 http://deb.debian.org/debian trixie/main amd64 openjdk-17-jre amd64 17.0.13~6ea-1 [205 kB] Get:84 http://deb.debian.org/debian trixie/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-2 [35.2 kB] Get:85 http://deb.debian.org/debian trixie/main amd64 libpango-1.0-0 amd64 1.54.0+ds-2 [223 kB] Get:86 http://deb.debian.org/debian trixie/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-2 [54.4 kB] Get:87 http://deb.debian.org/debian trixie/main amd64 gtk-update-icon-cache amd64 4.16.2+ds-1 [49.4 kB] Get:88 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.82.1-1 [1499 kB] Get:89 http://deb.debian.org/debian trixie/main amd64 libatk1.0-0t64 amd64 2.54.0-1 [51.2 kB] Get:90 http://deb.debian.org/debian trixie/main amd64 libgtk2.0-0t64 amd64 2.24.33-6 [1828 kB] Get:91 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.6-1 [23.6 kB] Get:92 http://deb.debian.org/debian trixie/main amd64 libidn2-0 amd64 2.3.7-2 [128 kB] Get:93 http://deb.debian.org/debian trixie/main amd64 libtasn1-6 amd64 4.19.0-3+b2 [48.9 kB] Get:94 http://deb.debian.org/debian trixie/main amd64 libavahi-client3 amd64 0.8-13+b2 [47.0 kB] Get:95 http://deb.debian.org/debian trixie/main amd64 libavahi-common3 amd64 0.8-13+b2 [43.3 kB] Get:96 http://deb.debian.org/debian trixie/main amd64 libavahi-common-data amd64 0.8-13+b2 [112 kB] Get:97 http://deb.debian.org/debian trixie/main amd64 libpcre2-8-0 amd64 10.42-4+b1 [262 kB] Get:98 http://deb.debian.org/debian trixie/main amd64 libselinux1 amd64 3.7-3 [76.9 kB] Get:99 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:100 http://deb.debian.org/debian trixie/main amd64 liblzma5 amd64 5.6.2-2 [254 kB] Get:101 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:102 http://deb.debian.org/debian trixie/main amd64 perl-base amd64 5.38.2-5 [1643 kB] Get:103 http://deb.debian.org/debian trixie/main amd64 debconf all 1.5.87 [119 kB] Get:104 http://deb.debian.org/debian trixie/main amd64 java-common all 0.76 [6776 B] Get:105 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.14-2+b1 [154 kB] Get:106 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:107 http://deb.debian.org/debian trixie/main amd64 libnspr4 amd64 2:4.35-1.1+b1 [109 kB] Get:108 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.0-1 [902 kB] Get:109 http://deb.debian.org/debian trixie/main amd64 libnss3 amd64 2:3.103-1 [1352 kB] Get:110 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.2-8 [139 kB] Get:111 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.2-8 [35.6 kB] Get:112 http://deb.debian.org/debian trixie/main amd64 libaudit-common all 1:3.1.2-4 [11.5 kB] Get:113 http://deb.debian.org/debian trixie/main amd64 libcap-ng0 amd64 0.8.5-2 [17.2 kB] Get:114 http://deb.debian.org/debian trixie/main amd64 libaudit1 amd64 1:3.1.2-4+b1 [49.0 kB] Get:115 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.2-8 [1216 kB] Get:116 http://deb.debian.org/debian trixie/main amd64 util-linux-extra amd64 2.40.2-8 [265 kB] Get:117 http://deb.debian.org/debian trixie/main amd64 libpcsclite1 amd64 2.3.0-1 [55.4 kB] Get:118 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get:119 http://deb.debian.org/debian trixie/main amd64 libx11-xcb1 amd64 2:1.8.7-1+b1 [232 kB] Get:120 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:121 http://deb.debian.org/debian trixie/main amd64 libmd0 amd64 1.1.0-2 [35.8 kB] Get:122 http://deb.debian.org/debian trixie/main amd64 libbsd0 amd64 0.12.2-2 [131 kB] Get:123 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get:124 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get:125 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:126 http://deb.debian.org/debian trixie/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get:127 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:128 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:129 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get:130 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.3-1 [105 kB] Get:131 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get:132 http://deb.debian.org/debian trixie/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB] Get:133 http://deb.debian.org/debian trixie/main amd64 libxcb-render0 amd64 1.17.0-2 [115 kB] Get:134 http://deb.debian.org/debian trixie/main amd64 libxcb-shm0 amd64 1.17.0-2 [105 kB] Get:135 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get:136 http://deb.debian.org/debian trixie/main amd64 libudev1 amd64 256.6-1 [145 kB] Get:137 http://deb.debian.org/debian trixie/main amd64 libacl1 amd64 2.3.2-2 [32.4 kB] Get:138 http://deb.debian.org/debian trixie/main amd64 libcrypt1 amd64 1:4.4.36-5 [89.8 kB] Get:139 http://deb.debian.org/debian trixie/main amd64 libpam0g amd64 1.5.3-7 [67.7 kB] Get:140 http://deb.debian.org/debian trixie/main amd64 libseccomp2 amd64 2.5.5-1+b1 [47.3 kB] Get:141 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.2-8 [154 kB] Get:142 http://deb.debian.org/debian trixie/main amd64 libdebconfclient0 amd64 0.272 [10.0 kB] Get:143 http://deb.debian.org/debian trixie/main amd64 base-passwd amd64 3.6.4 [50.9 kB] Get:144 http://deb.debian.org/debian trixie/main amd64 login.defs all 1:4.16.0-4 [185 kB] Get:145 http://deb.debian.org/debian trixie/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-7 [697 kB] Get:146 http://deb.debian.org/debian trixie/main amd64 libpam-modules-bin amd64 1.5.3-7 [54.4 kB] Get:147 http://deb.debian.org/debian trixie/main amd64 libpam-modules amd64 1.5.3-7 [265 kB] Get:148 http://deb.debian.org/debian trixie/main amd64 libattr1 amd64 1:2.5.2-1 [22.5 kB] Get:149 http://deb.debian.org/debian trixie/main amd64 libsemanage-common all 3.7-2 [7108 B] Get:150 http://deb.debian.org/debian trixie/main amd64 libsepol2 amd64 3.7-1 [293 kB] Get:151 http://deb.debian.org/debian trixie/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Get:152 http://deb.debian.org/debian trixie/main amd64 libsemanage2 amd64 3.7-2 [91.3 kB] Get:153 http://deb.debian.org/debian trixie/main amd64 passwd amd64 1:4.16.0-4 [1232 kB] Get:154 http://deb.debian.org/debian trixie/main amd64 adduser all 3.137 [140 kB] Get:155 http://deb.debian.org/debian trixie/main amd64 libpam-runtime all 1.5.3-7 [140 kB] Get:156 http://deb.debian.org/debian trixie/main amd64 init-system-helpers all 1.67 [38.7 kB] Get:157 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get:158 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get:159 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.21-1 [47.3 kB] Get:160 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get:161 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get:162 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:163 http://deb.debian.org/debian trixie/main amd64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get:164 http://deb.debian.org/debian trixie/main amd64 adwaita-icon-theme all 47.0-1 [463 kB] Get:165 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get:166 http://deb.debian.org/debian trixie/main amd64 fontconfig amd64 2.15.0-1.1 [463 kB] Get:167 http://deb.debian.org/debian trixie/main amd64 libthai-data all 0.1.29-2 [168 kB] Get:168 http://deb.debian.org/debian trixie/main amd64 libdatrie1 amd64 0.2.13-3 [37.7 kB] Get:169 http://deb.debian.org/debian trixie/main amd64 libthai0 amd64 0.1.29-2 [49.1 kB] Get:170 http://deb.debian.org/debian trixie/main amd64 libxcomposite1 amd64 1:0.4.5-1+b1 [14.9 kB] Get:171 http://deb.debian.org/debian trixie/main amd64 libxfixes3 amd64 1:6.0.0-2+b1 [20.3 kB] Get:172 http://deb.debian.org/debian trixie/main amd64 libxcursor1 amd64 1:1.2.2-1 [37.1 kB] Get:173 http://deb.debian.org/debian trixie/main amd64 libxdamage1 amd64 1:1.1.6-1+b1 [15.5 kB] Get:174 http://deb.debian.org/debian trixie/main amd64 libxinerama1 amd64 2:1.1.4-3+b1 [16.0 kB] Get:175 http://deb.debian.org/debian trixie/main amd64 libxrandr2 amd64 2:1.5.4-1 [36.1 kB] Get:176 http://deb.debian.org/debian trixie/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get:177 http://deb.debian.org/debian trixie/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get:178 http://deb.debian.org/debian trixie/main amd64 libvulkan1 amd64 1.3.290.0-1 [126 kB] Get:179 http://deb.debian.org/debian trixie/main amd64 libwayland-server0 amd64 1.23.0-1 [34.0 kB] Get:180 http://deb.debian.org/debian trixie/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get:181 http://deb.debian.org/debian trixie/main amd64 libpciaccess0 amd64 0.17-3+b1 [51.9 kB] Get:182 http://deb.debian.org/debian trixie/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB] Get:183 http://deb.debian.org/debian trixie/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB] Get:184 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-2 [188 kB] Get:185 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get:186 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get:187 http://deb.debian.org/debian trixie/main amd64 libllvm18 amd64 1:18.1.8-11 [25.0 MB] Get:188 http://deb.debian.org/debian trixie/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get:189 http://deb.debian.org/debian trixie/main amd64 libsensors5 amd64 1:3.6.0-10 [34.7 kB] Get:190 http://deb.debian.org/debian trixie/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [107 kB] Get:191 http://deb.debian.org/debian trixie/main amd64 mesa-libgallium amd64 24.2.2-1 [9058 kB] Get:192 http://deb.debian.org/debian trixie/main amd64 libxcb-randr0 amd64 1.17.0-2 [116 kB] Get:193 http://deb.debian.org/debian trixie/main amd64 libgbm1 amd64 24.2.2-1 [42.6 kB] Get:194 http://deb.debian.org/debian trixie/main amd64 libgl1-mesa-dri amd64 24.2.2-1 [43.7 kB] Get:195 http://deb.debian.org/debian trixie/main amd64 libglx-mesa0 amd64 24.2.2-1 [154 kB] Get:196 http://deb.debian.org/debian trixie/main amd64 libglapi-mesa amd64 24.2.2-1 [37.8 kB] Get:197 http://deb.debian.org/debian trixie/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [106 kB] Get:198 http://deb.debian.org/debian trixie/main amd64 libxcb-glx0 amd64 1.17.0-2 [122 kB] Get:199 http://deb.debian.org/debian trixie/main amd64 libxcb-present0 amd64 1.17.0-2 [105 kB] Get:200 http://deb.debian.org/debian trixie/main amd64 libxcb-sync1 amd64 1.17.0-2 [108 kB] Get:201 http://deb.debian.org/debian trixie/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [109 kB] Get:202 http://deb.debian.org/debian trixie/main amd64 libxshmfence1 amd64 1.3-1+b1 [8852 B] Get:203 http://deb.debian.org/debian trixie/main amd64 libgl1 amd64 1.7.0-1+b1 [89.8 kB] Get:204 http://deb.debian.org/debian trixie/main amd64 libglx0 amd64 1.7.0-1+b1 [35.0 kB] Get:205 http://deb.debian.org/debian trixie/main amd64 libglvnd0 amd64 1.7.0-1+b1 [56.3 kB] Get:206 http://deb.debian.org/debian trixie/main amd64 libgif7 amd64 5.2.2-1 [43.9 kB] Get:207 http://deb.debian.org/debian trixie/main amd64 libapt-pkg6.0t64 amd64 2.9.8 [1045 kB] Get:208 http://deb.debian.org/debian trixie/main amd64 dpkg amd64 1.22.11 [1531 kB] Get:209 http://deb.debian.org/debian trixie/main amd64 sysvinit-utils amd64 3.10-2 [32.7 kB] Get:210 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get:211 http://deb.debian.org/debian trixie/main amd64 libxtst6 amd64 2:1.2.3-1.1+b1 [25.9 kB] Get:212 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB] Get:213 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get:214 http://deb.debian.org/debian trixie/main amd64 at-spi2-common all 2.54.0-1 [170 kB] Get:215 http://deb.debian.org/debian trixie/main amd64 libgtk2.0-common all 2.24.33-6 [2662 kB] Get:216 http://deb.debian.org/debian trixie/main amd64 libxxhash0 amd64 0.8.2-2+b1 [26.6 kB] Get:217 http://deb.debian.org/debian trixie/main amd64 liblz4-1 amd64 1.9.4-3 [59.4 kB] Get:218 http://deb.debian.org/debian trixie/main amd64 tar amd64 1.35+dfsg-3 [813 kB] Get:219 http://deb.debian.org/debian trixie/main amd64 findutils amd64 4.10.0-3 [700 kB] Get:220 http://deb.debian.org/debian trixie/main amd64 grep amd64 3.11-4 [431 kB] Get:221 http://deb.debian.org/debian trixie/main amd64 gzip amd64 1.12-1.1 [133 kB] Get:222 http://deb.debian.org/debian trixie/main amd64 hostname amd64 3.23+nmu2 [10.6 kB] Get:223 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.2-8 [81.3 kB] Get:224 http://deb.debian.org/debian trixie/main amd64 ncurses-bin amd64 6.5-2 [433 kB] Get:225 http://deb.debian.org/debian trixie/main amd64 sed amd64 4.9-2 [329 kB] Get:226 http://deb.debian.org/debian trixie/main amd64 gpgv amd64 2.2.43-8+b1 [218 kB] Get:227 http://deb.debian.org/debian trixie/main amd64 debian-archive-keyring all 2023.4 [161 kB] Get:228 http://deb.debian.org/debian trixie/main amd64 apt amd64 2.9.8 [1410 kB] Get:229 http://deb.debian.org/debian trixie/main amd64 ncurses-base all 6.5-2 [270 kB] Get:230 http://deb.debian.org/debian trixie/main amd64 logsave amd64 1.47.1-1 [22.7 kB] Get:231 http://deb.debian.org/debian trixie/main amd64 libext2fs2t64 amd64 1.47.1-1 [210 kB] Get:232 http://deb.debian.org/debian trixie/main amd64 e2fsprogs amd64 1.47.1-1 [583 kB] Get:233 http://deb.debian.org/debian trixie/main amd64 libncbi-vdb3 amd64 3.0.2+dfsg-2+b1 [1049 kB] Get:234 http://deb.debian.org/debian trixie/main amd64 libmbedcrypto7t64 amd64 2.28.8-1 [284 kB] Get:235 http://deb.debian.org/debian trixie/main amd64 libmbedx509-1t64 amd64 2.28.8-1 [131 kB] Get:236 http://deb.debian.org/debian trixie/main amd64 libmbedtls14t64 amd64 2.28.8-1 [167 kB] Get:237 http://deb.debian.org/debian trixie/main amd64 mawk amd64 1.3.4.20240905-1 [138 kB] Get:238 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024a-4 [255 kB] Get:239 http://deb.debian.org/debian trixie/main amd64 ant-optional all 1.10.15-1 [456 kB] Get:240 http://deb.debian.org/debian trixie/main amd64 openjdk-21-jre-headless amd64 21.0.5~8ea-1 [41.8 MB] Get:241 http://deb.debian.org/debian trixie/main amd64 openjdk-21-jre amd64 21.0.5~8ea-1 [205 kB] Get:242 http://deb.debian.org/debian trixie/main amd64 default-jre amd64 2:1.21-76 [1068 B] Get:243 http://deb.debian.org/debian trixie/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get:244 http://deb.debian.org/debian trixie/main amd64 ant all 1.10.15-1 [2163 kB] Get:245 http://deb.debian.org/debian trixie/main amd64 antlr all 2.7.7+dfsg-14 [8376 B] Get:246 http://deb.debian.org/debian trixie/main amd64 libantlr-java all 2.7.7+dfsg-14 [458 kB] Get:247 http://deb.debian.org/debian trixie/main amd64 gcc-12-base amd64 12.4.0-2 [42.9 kB] Get:248 http://deb.debian.org/debian trixie/main amd64 ivy all 2.5.2-1 [1295 kB] Get:249 http://deb.debian.org/debian trixie/main amd64 libhamcrest-java all 2.2-2 [121 kB] Get:250 http://deb.debian.org/debian trixie/main amd64 junit4 all 4.13.2-4 [349 kB] Get:251 http://deb.debian.org/debian trixie/main amd64 libasm-java all 9.7-2 [390 kB] Get:252 http://deb.debian.org/debian trixie/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB] Get:253 http://deb.debian.org/debian trixie/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get:254 http://deb.debian.org/debian trixie/main amd64 libjansi-java all 2.4.1-2 [100 kB] Get:255 http://deb.debian.org/debian trixie/main amd64 groovy all 2.4.21-10 [12.8 MB] Get:256 http://deb.debian.org/debian trixie/main amd64 libcommons-io-java all 2.16.1-1 [480 kB] Get:257 http://deb.debian.org/debian trixie/main amd64 libapache-mime4j-java all 0.8.11-1 [448 kB] Get:258 http://deb.debian.org/debian trixie/main amd64 libaxis-java all 1.4-29 [1510 kB] Get:259 http://deb.debian.org/debian trixie/main amd64 libcommons-compress-java all 1.25.0-1 [635 kB] Get:260 http://deb.debian.org/debian trixie/main amd64 libngs-java amd64 3.0.3+dfsg-9 [110 kB] Get:261 http://deb.debian.org/debian trixie/main amd64 libngs-jni amd64 3.0.3+dfsg-9 [23.8 kB] Get:262 http://deb.debian.org/debian trixie/main amd64 libncbi-ngs3 amd64 3.0.3+dfsg-9 [155 kB] Get:263 http://deb.debian.org/debian trixie/main amd64 libsnappy1v5 amd64 1.2.1-1 [29.1 kB] Get:264 http://deb.debian.org/debian trixie/main amd64 libsnappy-jni amd64 1.1.10.5-2 [6396 B] Get:265 http://deb.debian.org/debian trixie/main amd64 libsnappy-java all 1.1.10.5-2 [87.5 kB] Get:266 http://deb.debian.org/debian trixie/main amd64 libhtsjdk-java all 4.1.0+dfsg-2 [1833 kB] Get:267 http://deb.debian.org/debian trixie/main amd64 libjetty9-java all 9.4.55-1 [2980 kB] Get:268 http://deb.debian.org/debian trixie/main amd64 libinchi1.07 amd64 1.07.1+dfsg-4 [556 kB] Get:269 http://deb.debian.org/debian trixie/main amd64 libjni-inchi-jni amd64 0.8+dfsg-8 [9188 B] Get:270 http://deb.debian.org/debian trixie/main amd64 libexec-maven-plugin-java all 3.1.0-2 [66.7 kB] Get:271 http://deb.debian.org/debian trixie/main amd64 libjni-inchi-java all 0.8+dfsg-8 [33.6 kB] Get:272 http://deb.debian.org/debian trixie/main amd64 libjmol-java all 16.2.15+dfsg-1 [8956 kB] Get:273 http://deb.debian.org/debian trixie/main amd64 libjswingreader-java all 0.3-4 [81.3 kB] Get:274 http://deb.debian.org/debian trixie/main amd64 libmiglayout-java all 11.1+ds-1 [179 kB] Get:275 http://deb.debian.org/debian trixie/main amd64 varna all 3-93+ds-6 [803 kB] Get:276 http://deb.debian.org/debian trixie/main amd64 jalview all 2.11.3.1+dfsg-1 [8766 kB] Get:277 http://deb.debian.org/debian trixie/main amd64 libantlr4-runtime-java all 4.9.2-2 [317 kB] Get:278 http://deb.debian.org/debian trixie/main amd64 libapfloat-java all 1.13.0-1 [700 kB] Get:279 http://deb.debian.org/debian trixie/main amd64 libgoogle-gson-java all 2.10.1-1 [262 kB] Get:280 http://deb.debian.org/debian trixie/main amd64 libciftools-java all 6.0.0-1 [2211 kB] Get:281 http://deb.debian.org/debian trixie/main amd64 libcommons-codec-java all 1.16.0-1 [297 kB] Get:282 http://deb.debian.org/debian trixie/main amd64 libcommons-lang3-java all 3.14.0-1 [621 kB] Get:283 http://deb.debian.org/debian trixie/main amd64 libcommons-text-java all 1.11.0-1 [217 kB] Get:284 http://deb.debian.org/debian trixie/main amd64 libdom4j-java all 2.1.4-1 [312 kB] Get:285 http://deb.debian.org/debian trixie/main amd64 libdrm-nouveau2 amd64 2.4.123-1 [19.6 kB] Get:286 http://deb.debian.org/debian trixie/main amd64 libfastutil-java all 8.5.14+dfsg-1 [19.8 MB] Get:287 http://deb.debian.org/debian trixie/main amd64 libguava-java all 32.0.1-1 [2708 kB] Get:288 http://deb.debian.org/debian trixie/main amd64 libitext5-java all 5.5.13.3-4 [2667 kB] Get:289 http://deb.debian.org/debian trixie/main amd64 libjansi-native-java all 1.8-2 [26.0 kB] Get:290 http://deb.debian.org/debian trixie/main amd64 libjgraphx-java all 2.1.0.7-4 [807 kB] Get:291 http://deb.debian.org/debian trixie/main amd64 libjgrapht-java all 1.5.2-1 [1610 kB] Get:292 http://deb.debian.org/debian trixie/main amd64 libmaven3-core-java all 3.8.8-1 [1579 kB] Get:293 http://deb.debian.org/debian trixie/main amd64 libmaven-shared-incremental-java all 1.1-4 [9924 B] Get:294 http://deb.debian.org/debian trixie/main amd64 libmetro-policy-java all 2.7.2-4 [172 kB] Get:295 http://deb.debian.org/debian trixie/main amd64 libmsgpack-java all 0.9.6-1 [161 kB] Get:296 http://deb.debian.org/debian trixie/main amd64 libplexus-compiler-java all 2.12.1-2 [99.0 kB] Get:297 http://deb.debian.org/debian trixie/main amd64 libsaaj-java all 1.4.0-4 [38.1 kB] Get:298 http://deb.debian.org/debian trixie/main amd64 libss2 amd64 1.47.1-1 [27.6 kB] Get:299 http://deb.debian.org/debian trixie/main amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 297 MB in 1s (232 MB/s) (Reading database 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19926 files and directories currently installed.) Preparing to unpack .../debianutils_5.20_amd64.deb ... Unpacking debianutils (5.20) over (5.7-0.5~deb12u1) ... Setting up debianutils (5.20) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19925 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.2-8_amd64.deb ... Unpacking bsdutils (1:2.40.2-8) over (1:2.38.1-5+deb12u1) ... Setting up bsdutils (1:2.40.2-8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19926 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.3.0+dfsg-2+b1_amd64.deb ... Unpacking libgmp10:amd64 (2:6.3.0+dfsg-2+b1) over (2:6.2.1+dfsg1-1.1) ... Setting up libgmp10:amd64 (2:6.3.0+dfsg-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19927 files and directories currently installed.) Preparing to unpack .../libzstd1_1.5.6+dfsg-1_amd64.deb ... Unpacking libzstd1:amd64 (1.5.6+dfsg-1) over (1.5.4+dfsg2-5) ... Setting up libzstd1:amd64 (1.5.6+dfsg-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19927 files and directories currently installed.) Preparing to unpack .../0-openssl_3.3.2-1_amd64.deb ... Unpacking openssl (3.3.2-1) over (3.0.14-1~deb12u1) ... Preparing to unpack .../1-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... Preparing to unpack .../2-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) over (1.20.1-2+deb12u2) ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19939 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.3.2-1_amd64.deb ... Unpacking libssl3t64:amd64 (3.3.2-1) ... Selecting previously unselected package openssl-provider-legacy. Preparing to unpack .../openssl-provider-legacy_3.3.2-1_amd64.deb ... Unpacking openssl-provider-legacy (3.3.2-1) ... Setting up openssl-provider-legacy (3.3.2-1) ... Setting up libssl3t64:amd64 (3.3.2-1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19958 files and directories currently installed.) Preparing to unpack .../coreutils_9.4-3.1_amd64.deb ... Unpacking coreutils (9.4-3.1) over (9.1-1) ... Setting up coreutils (9.4-3.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19963 files and directories currently installed.) Preparing to unpack .../dash_0.5.12-9_amd64.deb ... Unpacking dash (0.5.12-9) over (0.5.12-2) ... Setting up dash (0.5.12-9) ... Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19962 files and directories currently installed.) Removing libnettle8:amd64 (3.8.1-2) ... Selecting previously unselected package libnettle8t64:amd64. (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19963 files and directories currently installed.) Removing libhogweed6:amd64 (3.8.1-2) ... Selecting previously unselected package libhogweed6t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19957 files and directories currently installed.) Preparing to unpack .../libhogweed6t64_3.10-1_amd64.deb ... Unpacking libhogweed6t64:amd64 (3.10-1) ... Setting up libhogweed6t64:amd64 (3.10-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.25.5-2_amd64.deb ... Unpacking libp11-kit0:amd64 (0.25.5-2) over (0.24.1-2) ... Setting up libp11-kit0:amd64 (0.25.5-2) ... Selecting previously unselected package libunistring5:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../libunistring5_1.2-1_amd64.deb ... Unpacking libunistring5:amd64 (1.2-1) ... Setting up libunistring5:amd64 (1.2-1) ... dpkg: libgnutls30:amd64: dependency problems, but removing anyway as you requested: libcups2:amd64 depends on libgnutls30 (>= 3.7.5). apt depends on libgnutls30 (>= 3.7.5). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19970 files and directories currently installed.) Removing libgnutls30:amd64 (3.7.9-2+deb12u3) ... Selecting previously unselected package libgnutls30t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19941 files and directories currently installed.) Preparing to unpack .../libgnutls30t64_3.8.6-2_amd64.deb ... Unpacking libgnutls30t64:amd64 (3.8.6-2) ... Setting up libgnutls30t64:amd64 (3.8.6-2) ... dpkg: libcups2:amd64: dependency problems, but removing anyway as you requested: openjdk-17-jre-headless:amd64 depends on libcups2. libgtk2.0-0:amd64 depends on libcups2 (>= 1.6.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19970 files and directories currently installed.) Removing libcups2:amd64 (2.4.2-3+deb12u7) ... Selecting previously unselected package libcups2t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19962 files and directories currently installed.) Preparing to unpack .../libcups2t64_2.4.10-2_amd64.deb ... Unpacking libcups2t64:amd64 (2.4.10-2) ... Selecting previously unselected package libatomic1:amd64. Preparing to unpack .../libatomic1_14.2.0-3_amd64.deb ... Unpacking libatomic1:amd64 (14.2.0-3) ... Preparing to unpack .../libblkid1_2.40.2-8_amd64.deb ... Unpacking libblkid1:amd64 (2.40.2-8) over (2.38.1-5+deb12u1) ... Setting up libblkid1:amd64 (2.40.2-8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19975 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.2-8_amd64.deb ... Unpacking libmount1:amd64 (2.40.2-8) over (2.38.1-5+deb12u1) ... Setting up libmount1:amd64 (2.40.2-8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19976 files and directories currently installed.) Preparing to unpack .../0-shared-mime-info_2.4-5+b1_amd64.deb ... Unpacking shared-mime-info (2.4-5+b1) over (2.2-1) ... Preparing to unpack .../1-libharfbuzz0b_9.0.0-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (9.0.0-1) over (6.0.0+dfsg-3) ... Preparing to unpack .../2-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) over (20230311) ... Preparing to unpack .../3-ca-certificates-java_20240118_all.deb ... Unpacking ca-certificates-java (20240118) over (20230710~deb12u1) ... Preparing to unpack .../4-openjdk-17-jre-headless_17.0.13~6ea-1_amd64.deb ... Unpacking openjdk-17-jre-headless:amd64 (17.0.13~6ea-1) over (17.0.12+7-2~deb12u1) ... Selecting previously unselected package libatspi2.0-0t64:amd64. Preparing to unpack .../5-libatspi2.0-0t64_2.54.0-1_amd64.deb ... Unpacking libatspi2.0-0t64:amd64 (2.54.0-1) ... Selecting previously unselected package libatk-bridge2.0-0t64:amd64. Preparing to unpack .../6-libatk-bridge2.0-0t64_2.54.0-1_amd64.deb ... Unpacking libatk-bridge2.0-0t64:amd64 (2.54.0-1) ... Preparing to unpack .../7-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) over (2.42.10+dfsg-1+deb12u1) ... Preparing to unpack .../8-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_amd64.deb ... Unpacking libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) over (2.42.10+dfsg-1+deb12u1) ... Preparing to unpack .../9-libfreetype6_2.13.3+dfsg-1_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) over (2.12.1+dfsg-5+deb12u3) ... dpkg: libpng16-16:amd64: dependency problems, but removing anyway as you requested: openjdk-17-jre:amd64 depends on libpng16-16 (>= 1.6.2-1). libcairo2:amd64 depends on libpng16-16 (>= 1.6.2-1). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19999 files and directories currently installed.) Removing libpng16-16:amd64 (1.6.39-2) ... Selecting previously unselected package libpng16-16t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19988 files and directories currently installed.) Preparing to unpack .../00-libpng16-16t64_1.6.44-2_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.44-2) ... Preparing to unpack .../01-libcairo2_1.18.2-2_amd64.deb ... Unpacking libcairo2:amd64 (1.18.2-2) over (1.16.0-7) ... Selecting previously unselected package libcairo-gobject2:amd64. Preparing to unpack .../02-libcairo-gobject2_1.18.2-2_amd64.deb ... Unpacking libcairo-gobject2:amd64 (1.18.2-2) ... Selecting previously unselected package libcloudproviders0:amd64. Preparing to unpack .../03-libcloudproviders0_0.3.6-1_amd64.deb ... Unpacking libcloudproviders0:amd64 (0.3.6-1) ... Selecting previously unselected package libcolord2:amd64. Preparing to unpack .../04-libcolord2_1.4.7-1+b1_amd64.deb ... Unpacking libcolord2:amd64 (1.4.7-1+b1) ... Selecting previously unselected package libepoxy0:amd64. Preparing to unpack .../05-libepoxy0_1.5.10-2_amd64.deb ... Unpacking libepoxy0:amd64 (1.5.10-2) ... Selecting previously unselected package libwayland-client0:amd64. Preparing to unpack .../06-libwayland-client0_1.23.0-1_amd64.deb ... Unpacking libwayland-client0:amd64 (1.23.0-1) ... Selecting previously unselected package libwayland-cursor0:amd64. Preparing to unpack .../07-libwayland-cursor0_1.23.0-1_amd64.deb ... Unpacking libwayland-cursor0:amd64 (1.23.0-1) ... Selecting previously unselected package libwayland-egl1:amd64. Preparing to unpack .../08-libwayland-egl1_1.23.0-1_amd64.deb ... Unpacking libwayland-egl1:amd64 (1.23.0-1) ... Selecting previously unselected package xkb-data. Preparing to unpack .../09-xkb-data_2.42-1_all.deb ... Unpacking xkb-data (2.42-1) ... Selecting previously unselected package libxkbcommon0:amd64. Preparing to unpack .../10-libxkbcommon0_1.6.0-1+b1_amd64.deb ... Unpacking libxkbcommon0:amd64 (1.6.0-1+b1) ... Preparing to unpack .../11-libdbus-1-3_1.14.10-4+b1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.14.10-4+b1) over (1.14.10-1~deb12u1) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../12-dbus-bin_1.14.10-4+b1_amd64.deb ... Unpacking dbus-bin (1.14.10-4+b1) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../13-dbus-session-bus-common_1.14.10-4_all.deb ... Unpacking dbus-session-bus-common (1.14.10-4) ... Selecting previously unselected package libapparmor1:amd64. Preparing to unpack .../14-libapparmor1_3.1.7-1+b1_amd64.deb ... Unpacking libapparmor1:amd64 (3.1.7-1+b1) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../15-dbus-daemon_1.14.10-4+b1_amd64.deb ... Unpacking dbus-daemon (1.14.10-4+b1) ... Selecting previously unselected package libsystemd-shared:amd64. Preparing to unpack .../16-libsystemd-shared_256.6-1_amd64.deb ... Unpacking libsystemd-shared:amd64 (256.6-1) ... Selecting previously unselected package systemd. Preparing to unpack .../17-systemd_256.6-1_amd64.deb ... Unpacking systemd (256.6-1) ... Selecting previously unselected package dbus-system-bus-common. Preparing to unpack .../18-dbus-system-bus-common_1.14.10-4_all.deb ... Unpacking dbus-system-bus-common (1.14.10-4) ... Preparing to unpack .../19-usr-is-merged_39_all.deb ... Unpacking usr-is-merged (39) over (37~deb12u1) ... Setting up usr-is-merged (39) ... Selecting previously unselected package dbus. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21430 files and directories currently installed.) Preparing to unpack .../dbus_1.14.10-4+b1_amd64.deb ... Unpacking dbus (1.14.10-4+b1) ... Setting up libapparmor1:amd64 (3.1.7-1+b1) ... Setting up libsystemd-shared:amd64 (256.6-1) ... Setting up systemd (256.6-1) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' → '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' → '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' → '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. [ESC][0;1;39m/usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring.[ESC][0m [ESC][0;1;31m"/home" already exists and is not a directory.[ESC][0m Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21448 files and directories currently installed.) Preparing to unpack .../systemd-sysv_256.6-1_amd64.deb ... Unpacking systemd-sysv (256.6-1) ... Selecting previously unselected package libpam-systemd:amd64. Preparing to unpack .../libpam-systemd_256.6-1_amd64.deb ... Unpacking libpam-systemd:amd64 (256.6-1) ... Selecting previously unselected package dbus-user-session. Preparing to unpack .../dbus-user-session_1.14.10-4+b1_amd64.deb ... Unpacking dbus-user-session (1.14.10-4+b1) ... Selecting previously unselected package libdconf1:amd64. Preparing to unpack .../libdconf1_0.40.0-4+b2_amd64.deb ... Unpacking libdconf1:amd64 (0.40.0-4+b2) ... Preparing to unpack .../libtinfo6_6.5-2_amd64.deb ... Unpacking libtinfo6:amd64 (6.5-2) over (6.4-4) ... Setting up libtinfo6:amd64 (6.5-2) ... Selecting previously unselected package libncursesw6:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21499 files and directories currently installed.) Preparing to unpack .../0-libncursesw6_6.5-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.5-2) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../1-libproc2-0_2%3a4.0.4-6_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../2-procps_2%3a4.0.4-6_amd64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package dconf-service. Preparing to unpack .../3-dconf-service_0.40.0-4+b2_amd64.deb ... Unpacking dconf-service (0.40.0-4+b2) ... Selecting previously unselected package dconf-gsettings-backend:amd64. Preparing to unpack .../4-dconf-gsettings-backend_0.40.0-4+b2_amd64.deb ... Unpacking dconf-gsettings-backend:amd64 (0.40.0-4+b2) ... Selecting previously unselected package libgtk-3-common. Preparing to unpack .../5-libgtk-3-common_3.24.43-4_all.deb ... Unpacking libgtk-3-common (3.24.43-4) ... Selecting previously unselected package libgtk-3-0t64:amd64. Preparing to unpack .../6-libgtk-3-0t64_3.24.43-4_amd64.deb ... Unpacking libgtk-3-0t64:amd64 (3.24.43-4) ... Preparing to unpack .../7-libasound2-data_1.2.12-1_all.deb ... Unpacking libasound2-data (1.2.12-1) over (1.2.8-1) ... (Reading database ... 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Adding 'diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra' Adding 'diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra' Unpacking util-linux-extra (2.40.2-8) over (2.38.1-5+deb12u1) ... Setting up util-linux-extra (2.40.2-8) ... (Reading database ... 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Setting up libbsd0:amd64 (0.12.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22064 files and directories currently installed.) Preparing to unpack .../00-libxdmcp6_1%3a1.1.2-3+b1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3+b1) over (1:1.1.2-3) ... Preparing to unpack .../01-libxcb1_1.17.0-2_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2) over (1.15-1) ... Preparing to unpack .../02-libx11-data_2%3a1.8.7-1_all.deb ... 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Selecting previously unselected package libelf1t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17545 files and directories currently installed.) Preparing to unpack .../00-libelf1t64_0.191-2_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-2) ... Preparing to unpack .../01-libedit2_3.1-20240808-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20240808-1) over (3.1-20221030-2) ... Preparing to unpack .../02-libz3-4_4.8.12-3.1+b2_amd64.deb ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.1-1) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up libext2fs2t64:amd64 (1.47.1-1) ... (Reading database ... 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Unpacking e2fsprogs (1.47.1-1) over (1.47.0-2) ... dpkg: warning: unable to delete old directory '/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/udev': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd': Directory not empty Preparing to unpack .../libncbi-vdb3_3.0.2+dfsg-2+b1_amd64.deb ... Unpacking libncbi-vdb3:amd64 (3.0.2+dfsg-2+b1) over (3.0.2+dfsg-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17508 files and directories currently installed.) Removing libmbedtls14:amd64 (2.28.3-1) ... Removing libmbedx509-1:amd64 (2.28.3-1) ... Removing libmbedcrypto7:amd64 (2.28.3-1) ... Selecting previously unselected package libmbedcrypto7t64:amd64. (Reading database ... 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Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libdrm-nouveau2:amd64 (2.4.123-1) ... Setting up libatk1.0-0t64:amd64 (2.54.0-1) ... Setting up openjdk-21-jre-headless:amd64 (21.0.5~8ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libdrm-radeon1:amd64 (2.4.123-1) ... Setting up libxcursor1:amd64 (1:1.2.2-1) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libdrm-intel1:amd64 (2.4.123-1) ... Setting up libncbi-vdb3:amd64 (3.0.2+dfsg-2+b1) ... Setting up libcloudproviders0:amd64 (0.3.6-1) ... Setting up libcairo2:amd64 (1.18.2-2) ... Setting up libcolord2:amd64 (1.4.7-1+b1) ... Setting up libdconf1:amd64 (0.40.0-4+b2) ... Setting up dbus-user-session (1.14.10-4+b1) ... Setting up adwaita-icon-theme (47.0-1) ... Setting up libjni-inchi-java (0.8+dfsg-8) ... Setting up openjdk-17-jre-headless:amd64 (17.0.13~6ea-1) ... Installing new version of config file /etc/java-17-openjdk/security/java.policy ... Installing new version of config file /etc/java-17-openjdk/security/java.security ... Setting up libcairo-gobject2:amd64 (1.18.2-2) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libcups2t64:amd64 (2.4.10-2) ... Setting up libjmol-java (16.2.15+dfsg-1) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libncbi-ngs3:amd64 (3.0.3+dfsg-9) ... Setting up libatk-bridge2.0-0t64:amd64 (2.54.0-1) ... Setting up mesa-libgallium:amd64 (24.2.2-1) ... Setting up libngs-jni:amd64 (3.0.3+dfsg-9) ... Setting up libgbm1:amd64 (24.2.2-1) ... Setting up libgl1-mesa-dri:amd64 (24.2.2-1) ... Setting up dconf-service (0.40.0-4+b2) ... Setting up libgtk2.0-0t64:amd64 (2.24.33-6) ... Setting up libngs-java:amd64 (3.0.3+dfsg-9) ... Setting up libhtsjdk-java (4.1.0+dfsg-2) ... Setting up libglx-mesa0:amd64 (24.2.2-1) ... Setting up libglx0:amd64 (1.7.0-1+b1) ... Setting up dconf-gsettings-backend:amd64 (0.40.0-4+b2) ... Setting up libgl1:amd64 (1.7.0-1+b1) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up libgtk-3-0t64:amd64 (3.24.43-4) ... Processing triggers for debianutils (5.20) ... Processing triggers for libc-bin (2.40-2) ... Processing triggers for ca-certificates-java (20240118) ... done. Setting up antlr (2.7.7+dfsg-14) ... Setting up openjdk-21-jre:amd64 (21.0.5~8ea-1) ... Setting up ivy (2.5.2-1) ... Setting up ant (1.10.15-1) ... Setting up junit4 (4.13.2-4) ... Setting up groovy (2.4.21-10) ... Setting up default-jre-headless (2:1.21-76) ... Setting up openjdk-17-jre:amd64 (17.0.13~6ea-1) ... Setting up default-jre (2:1.21-76) ... Setting up ant-optional (1.10.15-1) ... Setting up varna (3-93+ds-6) ... Setting up jalview (2.11.3.1+dfsg-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20240118) ... done. 0m54.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-yf', 'dist-upgrade'] 0m54.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m54.6s DUMP: 5936ef5a2520ea49a5ed6323177b53d4 - 0m54.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m54.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'show', '--no-all-versions', 'jalview'] 0m54.7s DUMP: Package: jalview Version: 2.11.3.1+dfsg-1 Installed-Size: 9076 Maintainer: Debian Java Maintainers Architecture: all Depends: default-jre, debconf, libcommons-discovery-java, libjaxws-java, groovy, javahelp2, libandroid-json-org-java, libapache-mime4j-java, libaxis-java, libbiojava6-java, libhtsjdk-java, libhttpclient-java, libhttpcore-java, libhttpmime-java, libintervalstorej-java, libjaba-client-java, libjaxb-api-java, libjaxb-java, libjaxrs-api-java, libjersey1-client-java, libjersey1-core-java, libjetty9-java, libjfreesvg-java, libjmol-java, libjson-simple-java, libjsoup-java, libjswingreader-java, liblog4j1.2-java, liblog4j2-java, libmiglayout-java, libslf4j-java, libvamsas-client-java, varna, debconf (>= 0.5) | debconf-2.0 Suggests: clustalw, kalign, t-coffee Description-en: multiple alignment editor JalView is a Java DNA, RNA and protein sequence alignment editor that can work with sequence alignments produced by programs implementing alignment algorithms such as clustalw, kalign and t-coffee. . It has lots of features, is actively developed, and will compare advantageously to BioEdit, while being free as in free speech! Description-md5: 92268a8829a03697abafe2eb31617a27 Homepage: https://www.jalview.org Section: science Priority: optional Filename: pool/main/j/jalview/jalview_2.11.3.1+dfsg-1_all.deb Size: 8765684 MD5sum: 6b853255b3a09f40bc3e4b6b8e64212a SHA256: 3916ec50fa906bc3db83b4be3e4c9d03135d65f16bd95f95de23662a75f4aa35 0m54.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'show', '--no-all-versions', 'jalview'] 0m54.7s INFO: apt-cache knows about the following packages: jalview 0m54.7s INFO: Running scripts pre_install 0m54.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_database-server'] 0m54.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_database-server'] 0m54.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_exceptions'] 0m54.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_exceptions'] 0m54.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_extras'] 0m54.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_extras'] 0m54.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture'] 0m54.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture'] 0m54.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m54.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m54.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy'] 0m54.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m54.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy'] 0m54.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy', 'jalview'] 0m54.8s DUMP: jalview: Installed: 2.11.3.1+dfsg-1 Candidate: 2.11.3.1+dfsg-1 Version table: *** 2.11.3.1+dfsg-1 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 100 /var/lib/dpkg/status 0m54.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy', 'jalview'] 0m54.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-y', 'install', 'jalview'] 0m55.1s DUMP: Reading package lists... Building dependency tree... Reading state information... jalview is already the newest version (2.11.3.1+dfsg-1). The following packages were automatically installed and are no longer required: libdrm-nouveau2 libinchi1 libllvm15 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m55.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-y', 'install', 'jalview'] 0m55.1s INFO: Running scripts post_install 0m55.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_install_exceptions'] 0m55.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_install_exceptions'] 0m55.1s INFO: Running scripts post_distupgrade 0m55.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m55.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m55.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_exceptions'] 0m55.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_exceptions'] 0m55.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m55.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m55.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m55.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m55.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_zz_backports'] 0m55.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_zz_backports'] 0m55.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 0m55.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 0m55.7s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpnyhxg0b0 to sid 0m55.7s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m55.7s INFO: Running scripts pre_distupgrade 0m55.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m55.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m55.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m55.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m55.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m55.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m55.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m55.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m55.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m55.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m55.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'update'] 0m57.6s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [202 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9994 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7324 kB] Fetched 17.5 MB in 1s (11.8 MB/s) Reading package lists... 0m57.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'update'] 0m57.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-yf', 'dist-upgrade'] 1m1.6s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libdrm-nouveau2 libinchi1 libllvm15 libllvm18 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libcommons-math3-java libllvm19 The following packages will be upgraded: bsdutils gcc-14-base gpgv gtk-update-icon-cache jalview libatomic1 libaudit-common libaudit1 libblkid1 libc-bin libc6 libgbm1 libgcc-s1 libgl1-mesa-dri libglapi-mesa libglx-mesa0 libllvm18 libmount1 libnss3 libplexus-compiler-java libsmartcols1 libsqlite3-0 libstdc++6 libuuid1 login mesa-libgallium mount tzdata util-linux util-linux-extra 30 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 81.0 MB of archives. After this operation, 133 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.40.2-9 [105 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libaudit-common all 1:4.0.1-1 [12.3 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 14.2.0-6 [9284 B] Get:4 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-6 [46.7 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-6 [72.8 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-6 [715 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libc6 amd64 2.40-3 [2807 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libaudit1 amd64 1:4.0.1-1 [54.5 kB] Get:9 http://deb.debian.org/debian sid/main amd64 util-linux-extra amd64 2.40.2-9 [265 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.40.2-9 [35.6 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.40.2-9 [168 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.40.2-9 [199 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.40.2-9 [139 kB] Get:14 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.40.2-9 [1216 kB] Get:15 http://deb.debian.org/debian sid/main amd64 mount amd64 2.40.2-9 [154 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libc-bin amd64 2.40-3 [627 kB] Get:17 http://deb.debian.org/debian sid/main amd64 login amd64 1:4.16.0-2+really2.40.2-9 [81.4 kB] Get:18 http://deb.debian.org/debian sid/main amd64 gpgv amd64 2.2.44-1 [218 kB] Get:19 http://deb.debian.org/debian sid/main amd64 tzdata all 2024b-2 [256 kB] Get:20 http://deb.debian.org/debian sid/main amd64 gtk-update-icon-cache amd64 4.16.3+ds-1 [49.7 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libcommons-math3-java all 3.6.1-3 [2018 kB] Get:22 http://deb.debian.org/debian sid/main amd64 jalview all 2.11.4.0+dfsg-3 [8967 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libglx-mesa0 amd64 24.2.4-1 [154 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libgbm1 amd64 24.2.4-1 [42.7 kB] Get:25 http://deb.debian.org/debian sid/main amd64 mesa-libgallium amd64 24.2.4-1 [9182 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libglapi-mesa amd64 24.2.4-1 [37.9 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libgl1-mesa-dri amd64 24.2.4-1 [43.8 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libllvm19 amd64 1:19.1.1-1 [26.0 MB] Get:29 http://deb.debian.org/debian sid/main amd64 libllvm18 amd64 1:18.1.8-12 [25.0 MB] Get:30 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libnss3 amd64 2:3.105-2 [1393 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libplexus-compiler-java all 2.12.1-3 [99.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 81.0 MB in 0s (179 MB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17091 files and directories currently installed.) Preparing to unpack .../libc6_2.40-3_amd64.deb ... Unpacking libc6:amd64 (2.40-3) over (2.40-2) ... Setting up libc6:amd64 (2.40-3) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17090 files and directories currently installed.) Preparing to unpack .../util-linux-extra_2.40.2-9_amd64.deb ... Leaving 'diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra' Leaving 'diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra' Unpacking util-linux-extra (2.40.2-9) over (2.40.2-8) ... Preparing to unpack .../libuuid1_2.40.2-9_amd64.deb ... Unpacking libuuid1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libuuid1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17090 files and directories currently installed.) Preparing to unpack .../libblkid1_2.40.2-9_amd64.deb ... Unpacking libblkid1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libblkid1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17090 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.2-9_amd64.deb ... Unpacking libmount1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libmount1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17090 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.2-9_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libsmartcols1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17090 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.2-9_amd64.deb ... Unpacking util-linux (2.40.2-9) over (2.40.2-8) ... Setting up util-linux (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17090 files and directories currently installed.) Preparing to unpack .../mount_2.40.2-9_amd64.deb ... Unpacking mount (2.40.2-9) over (2.40.2-8) ... Preparing to unpack .../libc-bin_2.40-3_amd64.deb ... Unpacking libc-bin (2.40-3) over (2.40-2) ... Setting up libc-bin (2.40-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17090 files and directories currently installed.) Preparing to unpack .../login_1%3a4.16.0-2+really2.40.2-9_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.2-9) over (1:4.16.0-2+really2.40.2-8) ... Preparing to unpack .../gpgv_2.2.44-1_amd64.deb ... Unpacking gpgv (2.2.44-1) over (2.2.43-8+b1) ... Setting up gpgv (2.2.44-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17089 files and directories currently installed.) Preparing to unpack .../00-tzdata_2024b-2_all.deb ... Unpacking tzdata (2024b-2) over (2024a-4) ... Preparing to unpack .../01-gtk-update-icon-cache_4.16.3+ds-1_amd64.deb ... Unpacking gtk-update-icon-cache (4.16.3+ds-1) over (4.16.2+ds-1) ... Selecting previously unselected package libcommons-math3-java. Preparing to unpack .../02-libcommons-math3-java_3.6.1-3_all.deb ... Unpacking libcommons-math3-java (3.6.1-3) ... Preparing to unpack .../03-jalview_2.11.4.0+dfsg-3_all.deb ... Unpacking jalview (2.11.4.0+dfsg-3) over (2.11.3.1+dfsg-1) ... Preparing to unpack .../04-libglx-mesa0_24.2.4-1_amd64.deb ... Unpacking libglx-mesa0:amd64 (24.2.4-1) over (24.2.2-1) ... Preparing to unpack .../05-libgbm1_24.2.4-1_amd64.deb ... Unpacking libgbm1:amd64 (24.2.4-1) over (24.2.2-1) ... Preparing to unpack .../06-mesa-libgallium_24.2.4-1_amd64.deb ... Unpacking mesa-libgallium:amd64 (24.2.4-1) over (24.2.2-1) ... Preparing to unpack .../07-libglapi-mesa_24.2.4-1_amd64.deb ... Unpacking libglapi-mesa:amd64 (24.2.4-1) over (24.2.2-1) ... Preparing to unpack .../08-libgl1-mesa-dri_24.2.4-1_amd64.deb ... Unpacking libgl1-mesa-dri:amd64 (24.2.4-1) over (24.2.2-1) ... Selecting previously unselected package libllvm19:amd64. Preparing to unpack .../09-libllvm19_1%3a19.1.1-1_amd64.deb ... Unpacking libllvm19:amd64 (1:19.1.1-1) ... Preparing to unpack .../10-libllvm18_1%3a18.1.8-12_amd64.deb ... Unpacking libllvm18:amd64 (1:18.1.8-12) over (1:18.1.8-11) ... Preparing to unpack .../11-libsqlite3-0_3.46.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.1-1) over (3.46.0-1) ... Preparing to unpack .../12-libnss3_2%3a3.105-2_amd64.deb ... Unpacking libnss3:amd64 (2:3.105-2) over (2:3.103-1) ... Preparing to unpack .../13-libplexus-compiler-java_2.12.1-3_all.deb ... Unpacking libplexus-compiler-java (2.12.1-3) over (2.12.1-2) ... Setting up libllvm19:amd64 (1:19.1.1-1) ... Setting up gtk-update-icon-cache (4.16.3+ds-1) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up libnss3:amd64 (2:3.105-2) ... Setting up tzdata (2024b-2) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Oct 6 16:32:24 UTC 2024. Universal Time is now: Sun Oct 6 16:32:24 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libplexus-compiler-java (2.12.1-3) ... Setting up libatomic1:amd64 (14.2.0-6) ... Setting up libglapi-mesa:amd64 (24.2.4-1) ... Setting up mount (2.40.2-9) ... Setting up libcommons-math3-java (3.6.1-3) ... Setting up util-linux-extra (2.40.2-9) ... Setting up libllvm18:amd64 (1:18.1.8-12) ... Setting up login (1:4.16.0-2+really2.40.2-9) ... Setting up mesa-libgallium:amd64 (24.2.4-1) ... Setting up libgbm1:amd64 (24.2.4-1) ... Setting up libgl1-mesa-dri:amd64 (24.2.4-1) ... Setting up jalview (2.11.4.0+dfsg-3) ... Setting up libglx-mesa0:amd64 (24.2.4-1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for systemd (256.6-1) ... Processing triggers for shared-mime-info (2.4-5+b1) ... Processing triggers for hicolor-icon-theme (0.18-1) ... 1m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-yf', 'dist-upgrade'] 1m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m1.8s DUMP: 8037854fb13aed1ee4a932ca9b3da209 - 1m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'show', '--no-all-versions', 'jalview'] 1m1.9s DUMP: Package: jalview Version: 2.11.4.0+dfsg-3 Installed-Size: 9285 Maintainer: Debian Java Maintainers Architecture: all Depends: default-jre, debconf, libcommons-discovery-java, libjaxws-java, groovy, javahelp2, libandroid-json-org-java, libapache-mime4j-java, libaxis-java, libbiojava6-java, libcommons-math3-java, libhtsjdk-java, libhttpclient-java, libhttpcore-java, libhttpmime-java, libintervalstorej-java, libjaba-client-java, libjaxb-api-java, libjaxb-java, libjaxrs-api-java, libjersey1-client-java, libjersey1-core-java, libjetty9-java, libjfreesvg-java, libjmol-java, libjson-simple-java, libjsoup-java, libjswingreader-java, liblog4j1.2-java, liblog4j2-java, libmiglayout-java, libslf4j-java, libvamsas-client-java, varna, debconf (>= 0.5) | debconf-2.0 Suggests: clustalw, kalign, t-coffee Description-en: multiple alignment editor JalView is a Java DNA, RNA and protein sequence alignment editor that can work with sequence alignments produced by programs implementing alignment algorithms such as clustalw, kalign and t-coffee. . It has lots of features, is actively developed, and will compare advantageously to BioEdit, while being free as in free speech! Description-md5: 92268a8829a03697abafe2eb31617a27 Homepage: https://www.jalview.org Section: science Priority: optional Filename: pool/main/j/jalview/jalview_2.11.4.0+dfsg-3_all.deb Size: 8967264 MD5sum: 49658bcba3edd85a4fa5a8155a46a6db SHA256: e4008e42cff25c1a04eca86a9cb32e6ef8bf26dcde6d19f0cdb742920fd811bc 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'show', '--no-all-versions', 'jalview'] 1m1.9s INFO: apt-cache knows about the following packages: jalview 1m1.9s INFO: Running scripts pre_install 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_database-server'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_database-server'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_exceptions'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_exceptions'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_extras'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_extras'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy'] 1m2.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy'] 1m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy', 'jalview'] 1m2.0s DUMP: jalview: Installed: 2.11.4.0+dfsg-3 Candidate: 2.11.4.0+dfsg-3 Version table: *** 2.11.4.0+dfsg-3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 1m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy', 'jalview'] 1m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-y', 'install', 'jalview'] 1m2.2s DUMP: Reading package lists... Building dependency tree... Reading state information... jalview is already the newest version (2.11.4.0+dfsg-3). The following packages were automatically installed and are no longer required: libdrm-nouveau2 libinchi1 libllvm15 libllvm18 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-y', 'install', 'jalview'] 1m2.2s INFO: Running scripts post_install 1m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_install_exceptions'] 1m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_install_exceptions'] 1m2.3s INFO: Running scripts post_distupgrade 1m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_exceptions'] 1m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_exceptions'] 1m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_zz_backports'] 1m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_distupgrade_zz_backports'] 1m2.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m2.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m2.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m3.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m3.6s INFO: Running scripts pre_install 1m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_database-server'] 1m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_database-server'] 1m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_exceptions'] 1m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_exceptions'] 1m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_extras'] 1m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_extras'] 1m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture'] 1m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture'] 1m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy'] 1m3.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy'] 1m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy', 'jalview'] 1m3.6s DUMP: jalview: Installed: 2.11.4.0+dfsg-3 Candidate: 2.11.4.0+dfsg-3 Version table: *** 2.11.4.0+dfsg-3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 1m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-cache', 'policy', 'jalview'] 1m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-y', 'install', 'jalview=2.11.4.0+dfsg-3'] 1m3.9s DUMP: Reading package lists... Building dependency tree... Reading state information... jalview is already the newest version (2.11.4.0+dfsg-3). The following packages were automatically installed and are no longer required: libdrm-nouveau2 libinchi1 libllvm15 libllvm18 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', '-y', 'install', 'jalview=2.11.4.0+dfsg-3'] 1m3.9s INFO: Running scripts post_install 1m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_install_exceptions'] 1m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_install_exceptions'] 1m4.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m4.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m5.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', '-ac', '--ignore-obsolete'] 1m7.7s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', '-ac', '--ignore-obsolete'] 1m7.7s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m7.7s DUMP: 0.15.6 1m7.7s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m7.7s INFO: Running adequate version 0.15.6 now. 1m7.7s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'jalview'] 1m7.8s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'jalview'] 1m7.8s INFO: Running scripts pre_remove 1m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m10.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m10.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_exceptions'] 1m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/pre_remove_exceptions'] 1m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m10.5s DUMP: install ok installed adduser adduser 3.137 install ok installed adwaita-icon-theme adwaita-icon-theme 47.0-1 install ok installed ant ant 1.10.15-1 install ok installed ant-optional ant-optional 1.10.15-1 install ok installed antlr antlr 2.7.7+dfsg-14 install ok installed apt apt 2.9.8 install ok installed at-spi2-common at-spi2-common 2.54.0-1 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed ca-certificates ca-certificates 20240203 install ok installed ca-certificates-java ca-certificates-java 20240118 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed dbus dbus 1.14.10-4+b1 install ok installed dbus-bin dbus-bin 1.14.10-4+b1 install ok installed dbus-daemon dbus-daemon 1.14.10-4+b1 install ok installed dbus-session-bus-common dbus-session-bus-common 1.14.10-4 install ok installed dbus-system-bus-common dbus-system-bus-common 1.14.10-4 install ok installed dbus-user-session dbus-user-session 1.14.10-4+b1 install ok installed dconf-gsettings-backend:amd64 dconf-gsettings-backend 0.40.0-4+b2 install ok installed dconf-service dconf-service 0.40.0-4+b2 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed default-jre default-jre 2:1.21-76 install ok installed default-jre-headless default-jre-headless 2:1.21-76 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed fontconfig fontconfig 2.15.0-1.1 install ok installed fontconfig-config fontconfig-config 2.15.0-1.1 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-8 install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-8 install ok installed gcc-12-base:amd64 gcc-12-base 12.4.0-2 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-6 install ok installed gpgv gpgv 2.2.44-1 install ok installed grep grep 3.11-4 install ok installed groovy groovy 2.4.21-10 install ok installed gtk-update-icon-cache gtk-update-icon-cache 4.16.3+ds-1 install ok installed gzip gzip 1.12-1.1 install ok installed hicolor-icon-theme hicolor-icon-theme 0.18-1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed ivy ivy 2.5.2-1 install ok installed jalview jalview 2.11.4.0+dfsg-3 install ok installed java-common java-common 0.76 install ok installed javahelp2 javahelp2 2.0.05.ds1-10 install ok installed junit4 junit4 4.13.2-4 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libactivation-java libactivation-java 1.2.0-2 install ok installed libandroid-json-org-java libandroid-json-org-java 20121204-20090211-5 install ok installed libantlr-java libantlr-java 2.7.7+dfsg-14 install ok installed libantlr4-runtime-java libantlr4-runtime-java 4.9.2-2 install ok installed libaopalliance-java libaopalliance-java 20070526-7 install ok installed libapache-mime4j-java libapache-mime4j-java 0.8.11-1 install ok installed libapache-pom-java libapache-pom-java 29-2 install ok installed libapfloat-java libapfloat-java 1.13.0-1 install ok installed libapparmor1:amd64 libapparmor1 3.1.7-1+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libargs4j-java libargs4j-java 2.33-2 install ok installed libasm-java libasm-java 9.7-2 install ok installed libasound2-data libasound2-data 1.2.12-1 install ok installed libasound2t64:amd64 libasound2t64 1.2.12-1 install ok installed libatinject-jsr330-api-java libatinject-jsr330-api-java 1.0+ds1-5 install ok installed libatk-bridge2.0-0t64:amd64 libatk-bridge2.0-0t64 2.54.0-1 install ok installed libatk1.0-0t64:amd64 libatk1.0-0t64 2.54.0-1 install ok installed libatomic1:amd64 libatomic1 14.2.0-6 install ok installed libatspi2.0-0t64:amd64 libatspi2.0-0t64 2.54.0-1 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:4.0.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.0.1-1 install ok installed libavahi-client3:amd64 libavahi-client3 0.8-13+b2 install ok installed libavahi-common-data:amd64 libavahi-common-data 0.8-13+b2 install ok installed libavahi-common3:amd64 libavahi-common3 0.8-13+b2 install ok installed libaxis-java libaxis-java 1.4-29 install ok installed libbiojava6-java libbiojava6-java 6.1.0+dfsg-4 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b4 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbsf-java libbsf-java 1:2.4.0-8 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcairo-gobject2:amd64 libcairo-gobject2 1.18.2-2 install ok installed libcairo2:amd64 libcairo2 1.18.2-2 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcastor-core-java libcastor-core-java 1.3.2-7 install ok installed libcastor-xml-java libcastor-xml-java 1.3.2-7 install ok installed libcdi-api-java libcdi-api-java 1.2-3 install ok installed libciftools-java libciftools-java 6.0.0-1 install ok installed libcloudproviders0:amd64 libcloudproviders0 0.3.6-1 install ok installed libcodemodel-java libcodemodel-java 2.6+jaxb2.3.0.1-10.1 install ok installed libcolord2:amd64 libcolord2 1.4.7-1+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcommons-cli-java libcommons-cli-java 1.6.0-1 install ok installed libcommons-codec-java libcommons-codec-java 1.16.0-1 install ok installed libcommons-compress-java libcommons-compress-java 1.25.0-1 install ok installed libcommons-discovery-java libcommons-discovery-java 0.5-4 install ok installed libcommons-exec-java libcommons-exec-java 1.3-2 install ok installed libcommons-httpclient-java libcommons-httpclient-java 3.1-16 install ok installed libcommons-io-java libcommons-io-java 2.16.1-1 install ok installed libcommons-jexl2-java libcommons-jexl2-java 2.1.1-6 install ok installed libcommons-lang-java libcommons-lang-java 2.6-10 install ok installed libcommons-lang3-java libcommons-lang3-java 3.14.0-1 install ok installed libcommons-logging-java libcommons-logging-java 1.3.0-1 install ok installed libcommons-math-java libcommons-math-java 2.2-8 install ok installed libcommons-math3-java libcommons-math3-java 3.6.1-3 install ok installed libcommons-parent-java libcommons-parent-java 56-1 install ok installed libcommons-text-java libcommons-text-java 1.11.0-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libcups2t64:amd64 libcups2t64 2.4.10-2 install ok installed libdatrie1:amd64 libdatrie1 0.2.13-3 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdbus-1-3:amd64 libdbus-1-3 1.14.10-4+b1 install ok installed libdconf1:amd64 libdconf1 0.40.0-4+b2 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libdeflate0:amd64 libdeflate0 1.21-1 install ok installed libdom4j-java libdom4j-java 2.1.4-1 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.123-1 install ok installed libdrm-common libdrm-common 2.4.123-1 install ok installed libdrm-intel1:amd64 libdrm-intel1 2.4.123-1 install ok installed libdrm-nouveau2:amd64 libdrm-nouveau2 2.4.123-1 install ok installed libdrm-radeon1:amd64 libdrm-radeon1 2.4.123-1 install ok installed libdrm2:amd64 libdrm2 2.4.123-1 install ok installed libdtd-parser-java libdtd-parser-java 1.2-1 install ok installed libedit2:amd64 libedit2 3.1-20240808-1 install ok installed libel-api-java libel-api-java 3.0.0-3 install ok installed libelf1t64:amd64 libelf1t64 0.191-2 install ok installed libepoxy0:amd64 libepoxy0 1.5.10-2 install ok installed liberror-prone-java liberror-prone-java 2.18.0-1 install ok installed libexec-maven-plugin-java libexec-maven-plugin-java 3.1.0-2 install ok installed libexpat1:amd64 libexpat1 2.6.3-1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libfastinfoset-java libfastinfoset-java 1.2.12-3 install ok installed libfastutil-java libfastutil-java 8.5.14+dfsg-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libfontconfig1:amd64 libfontconfig1 2.15.0-1.1 install ok installed libfreetype6:amd64 libfreetype6 2.13.3+dfsg-1 install ok installed libfribidi0:amd64 libfribidi0 1.0.15-1 install ok installed libgbm1:amd64 libgbm1 24.2.4-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgdk-pixbuf-2.0-0:amd64 libgdk-pixbuf-2.0-0 2.42.12+dfsg-1 install ok installed libgdk-pixbuf2.0-common libgdk-pixbuf2.0-common 2.42.12+dfsg-1 install ok installed libgeronimo-annotation-1.3-spec-java libgeronimo-annotation-1.3-spec-java 1.3-1 install ok installed libgeronimo-interceptor-3.0-spec-java libgeronimo-interceptor-3.0-spec-java 1.0.1-4 install ok installed libgif7:amd64 libgif7 5.2.2-1 install ok installed libgl1:amd64 libgl1 1.7.0-1+b1 install ok installed libgl1-mesa-dri:amd64 libgl1-mesa-dri 24.2.4-1 install ok installed libglapi-mesa:amd64 libglapi-mesa 24.2.4-1 deinstall ok config-files libglib2.0-0:amd64 libglib2.0-0 2.74.6-2+deb12u3 install ok installed libglib2.0-0t64:amd64 libglib2.0-0t64 2.82.1-1 install ok installed libglvnd0:amd64 libglvnd0 1.7.0-1+b1 install ok installed libglx-mesa0:amd64 libglx-mesa0 24.2.4-1 install ok installed libglx0:amd64 libglx0 1.7.0-1+b1 install ok installed libgmbal-commons-java libgmbal-commons-java 3.2.1-b003-1.1 install ok installed libgmbal-java libgmbal-java 4.0.0-b002-1.1 install ok installed libgmbal-pfl-java libgmbal-pfl-java 4.0.1-b003-2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgoogle-gson-java libgoogle-gson-java 2.10.1-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-3 install ok installed libgtk-3-0t64:amd64 libgtk-3-0t64 3.24.43-4 install ok installed libgtk-3-common libgtk-3-common 3.24.43-4 deinstall ok config-files libgtk2.0-0:amd64 libgtk2.0-0 2.24.33-2+deb12u1 install ok installed libgtk2.0-0t64:amd64 libgtk2.0-0t64 2.24.33-6 install ok installed libgtk2.0-common libgtk2.0-common 2.24.33-6 install ok installed libguava-java libguava-java 32.0.1-1 install ok installed libguice-java libguice-java 4.2.3-2 install ok installed libhamcrest-java libhamcrest-java 2.2-2 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 9.0.0-1 install ok installed libhawtjni-runtime-java libhawtjni-runtime-java 1.18-1 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libhtsjdk-java libhtsjdk-java 4.1.0+dfsg-2 install ok installed libhttpclient-java libhttpclient-java 4.5.14-1 install ok installed libhttpcore-java libhttpcore-java 4.4.16-1 install ok installed libhttpmime-java libhttpmime-java 4.5.14-1 install ok installed libicu72:amd64 libicu72 72.1-5 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libinchi1 libinchi1 1.03+dfsg-4+b2 install ok installed libinchi1.07 libinchi1.07 1.07.1+dfsg-4 install ok installed libintervalstorej-java libintervalstorej-java 1.2+dfsg-5 install ok installed libisorelax-java libisorelax-java 20041111-14 install ok installed libistack-commons-java libistack-commons-java 3.0.6-5 install ok installed libitext5-java libitext5-java 5.5.13.3-4 install ok installed libjaba-client-java libjaba-client-java 2.2.0-2 install ok installed libjackson2-annotations-java libjackson2-annotations-java 2.14.0-1 install ok installed libjackson2-core-java libjackson2-core-java 2.14.1-1 install ok installed libjackson2-databind-java libjackson2-databind-java 2.14.0-1 install ok installed libjansi-java libjansi-java 2.4.1-2 install ok installed libjansi-native-java libjansi-native-java 1.8-2 install ok installed libjansi1-java libjansi1-java 1.18-3 install ok installed libjaxb-api-java libjaxb-api-java 2.3.1-1 install ok installed libjaxb-java libjaxb-java 2.3.0.1-10.1 install ok installed libjaxen-java libjaxen-java 1.1.6-4 install ok installed libjaxrs-api-java libjaxrs-api-java 2.1.2-2 install ok installed libjaxws-api-java libjaxws-api-java 2.3.0-1.1 install ok installed libjaxws-java libjaxws-java 2.3.0.2-2 install ok installed libjbig0:amd64 libjbig0 2.1-6.1+b1 install ok installed libjersey1-client-java libjersey1-client-java 1.19.3-8 install ok installed libjersey1-core-java libjersey1-core-java 1.19.3-8 install ok installed libjetty9-java libjetty9-java 9.4.55-1 install ok installed libjfreesvg-java libjfreesvg-java 4.1-2 install ok installed libjgrapht-java libjgrapht-java 1.5.2-1 install ok installed libjgraphx-java libjgraphx-java 2.1.0.7-4 install ok installed libjheaps-java libjheaps-java 0.14-2 install ok installed libjline2-java libjline2-java 2.14.6-5 install ok installed libjmol-java libjmol-java 16.2.15+dfsg-1 install ok installed libjni-inchi-java libjni-inchi-java 0.8+dfsg-8 install ok installed libjni-inchi-jni libjni-inchi-jni 0.8+dfsg-8 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-3 install ok installed libjson-simple-java libjson-simple-java 2.3.0-1 install ok installed libjsoup-java libjsoup-java 1.15.3-1 install ok installed libjsp-api-java libjsp-api-java 2.3.4-3 install ok installed libjsr305-java libjsr305-java 0.1~+svn49-11 install ok installed libjsr311-api-java libjsr311-api-java 1.1.1-1.1 install ok installed libjswingreader-java libjswingreader-java 0.3-4 install ok installed libjws-api-java libjws-api-java 1.1-2 install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-3 install ok installed libknopflerfish-osgi-framework-java libknopflerfish-osgi-framework-java 6.1.1-3.1 install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-3 install ok installed liblcms2-2:amd64 liblcms2-2 2.14-2+b1 install ok installed liblerc4:amd64 liblerc4 4.0.0+ds-4+b1 install ok installed liblightcouch-java liblightcouch-java 0.2.0-1 install ok installed libllvm15:amd64 libllvm15 1:15.0.6-4+b1 install ok installed libllvm18:amd64 libllvm18 1:18.1.8-12 install ok installed libllvm19:amd64 libllvm19 1:19.1.1-1 install ok installed liblog4j1.2-java liblog4j1.2-java 1.2.17-11 install ok installed liblog4j2-java liblog4j2-java 2.19.0-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmail-java libmail-java 1.6.5-2 install ok installed libmaven-archiver-java libmaven-archiver-java 3.6.0-1 install ok installed libmaven-compiler-plugin-java libmaven-compiler-plugin-java 3.10.1-2 install ok installed libmaven-file-management-java libmaven-file-management-java 3.0.0-1 install ok installed libmaven-jar-plugin-java libmaven-jar-plugin-java 3.3.0-2 install ok installed libmaven-parent-java libmaven-parent-java 35-1 install ok installed libmaven-resolver-java libmaven-resolver-java 1.6.3-1 install ok installed libmaven-shared-incremental-java libmaven-shared-incremental-java 1.1-4 install ok installed libmaven-shared-io-java libmaven-shared-io-java 3.0.0-4 install ok installed libmaven-shared-utils-java libmaven-shared-utils-java 3.3.4-1 install ok installed libmaven3-core-java libmaven3-core-java 3.8.8-1 install ok installed libmbedcrypto7t64:amd64 libmbedcrypto7t64 2.28.8-1 install ok installed libmbedtls14t64:amd64 libmbedtls14t64 2.28.8-1 install ok installed libmbedx509-1t64:amd64 libmbedx509-1t64 2.28.8-1 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmetro-policy-java libmetro-policy-java 2.7.2-4 install ok installed libmiglayout-java libmiglayout-java 11.1+ds-1 install ok installed libmimepull-java libmimepull-java 1.9.7-2 install ok installed libmjson-java libmjson-java 1.4.0-3 install ok installed libmmtf-java libmmtf-java 1.0.11-1 install ok installed libmongodb-java libmongodb-java 3.6.3-2 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libmsgpack-java libmsgpack-java 0.9.6-1 install ok installed libmsv-java libmsv-java 2009.1+dfsg1-6 install ok installed libnaga-java libnaga-java 3.0+svn80-5 install ok installed libncbi-ngs3:amd64 libncbi-ngs3 3.0.3+dfsg-9 install ok installed libncbi-vdb3:amd64 libncbi-vdb3 3.0.2+dfsg-2+b1 install ok installed libncursesw6:amd64 libncursesw6 6.5-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libngs-java:amd64 libngs-java 3.0.3+dfsg-9 install ok installed libngs-jni:amd64 libngs-jni 3.0.3+dfsg-9 install ok installed libnspr4:amd64 libnspr4 2:4.35-1.1+b1 install ok installed libnss3:amd64 libnss3 2:3.105-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam-systemd:amd64 libpam-systemd 256.6-1 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.54.0+ds-2 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.54.0+ds-2 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.54.0+ds-2 install ok installed libpciaccess0:amd64 libpciaccess0 0.17-3+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libpcsclite1:amd64 libpcsclite1 2.3.0-1 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.42.2-1+b1 install ok installed libplexus-archiver-java libplexus-archiver-java 4.6.1-1 install ok installed libplexus-cipher-java libplexus-cipher-java 2.0-1 install ok installed libplexus-classworlds-java libplexus-classworlds-java 2.7.0-1 install ok installed libplexus-compiler-java libplexus-compiler-java 2.12.1-3 install ok installed libplexus-component-annotations-java libplexus-component-annotations-java 2.1.1-1 install ok installed libplexus-container-default-java libplexus-container-default-java 2.1.1-1 install ok installed libplexus-interpolation-java libplexus-interpolation-java 1.26-1 install ok installed libplexus-io-java libplexus-io-java 3.3.1-2 install ok installed libplexus-languages-java libplexus-languages-java 1.1.1-2 install ok installed libplexus-sec-dispatcher-java libplexus-sec-dispatcher-java 2.0-3 install ok installed libplexus-utils2-java libplexus-utils2-java 3.4.2-1 install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.44-2 install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-6 install ok installed libqdox-java libqdox-java 1.12.1-3 install ok installed libqdox2-java libqdox2-java 2.0.3-1 install ok installed librelaxng-datatype-java librelaxng-datatype-java 1.0+ds1-3.1 install ok installed librhino-java librhino-java 1.7.14-2.1 install ok installed librngom-java librngom-java 2.3.0.1-10.1 install ok installed libsaaj-java libsaaj-java 1.4.0-4 install ok installed libsaaj-ri-java libsaaj-ri-java 1.4.1-1.1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsensors-config libsensors-config 1:3.6.0-10 install ok installed libsensors5:amd64 libsensors5 1:3.6.0-10 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libservlet-api-java libservlet-api-java 4.0.1-2 install ok installed libsharpyuv0:amd64 libsharpyuv0 1.4.0-0.1 install ok installed libsisu-inject-java libsisu-inject-java 0.3.4-2 install ok installed libsisu-plexus-java libsisu-plexus-java 0.3.4-3 install ok installed libslf4j-java libslf4j-java 1.7.32-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libsnappy-java libsnappy-java 1.1.10.5-2 install ok installed libsnappy-jni libsnappy-jni 1.1.10.5-2 install ok installed libsnappy1v5:amd64 libsnappy1v5 1.2.1-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-1 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstax-ex-java libstax-ex-java 1.7.8-3 install ok installed libstax2-api-java libstax2-api-java 4.1-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-6 install ok installed libstreambuffer-java libstreambuffer-java 1.5.4-1.1 install ok installed libsystemd-shared:amd64 libsystemd-shared 256.6-1 install ok installed libsystemd0:amd64 libsystemd0 256.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libthai-data libthai-data 0.1.29-2 install ok installed libthai0:amd64 libthai0 0.1.29-2 install ok installed libtiff6:amd64 libtiff6 4.5.1+git230720-5 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libtxw2-java libtxw2-java 2.3.0.1-10.1 install ok installed libudev1:amd64 libudev1 256.6-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libvamsas-client-java libvamsas-client-java 0.2+dfsg-2 install ok installed libvecmath-java libvecmath-java 1.5.2-7 install ok installed libvulkan1:amd64 libvulkan1 1.3.290.0-1 install ok installed libwagon-http-java libwagon-http-java 3.5.3-1 install ok installed libwagon-provider-api-java libwagon-provider-api-java 3.5.3-1 install ok installed libwayland-client0:amd64 libwayland-client0 1.23.0-1 install ok installed libwayland-cursor0:amd64 libwayland-cursor0 1.23.0-1 install ok installed libwayland-egl1:amd64 libwayland-egl1 1.23.0-1 install ok installed libwayland-server0:amd64 libwayland-server0 1.23.0-1 install ok installed libwebp7:amd64 libwebp7 1.4.0-0.1 install ok installed libwebsocket-api-java libwebsocket-api-java 1.1-2 install ok installed libwoodstox-java libwoodstox-java 1:6.2.1-1 install ok installed libwsdl4j-java libwsdl4j-java 1.6.3-4.1 install ok installed libx11-6:amd64 libx11-6 2:1.8.7-1+b1 install ok installed libx11-data libx11-data 2:1.8.7-1 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.8.7-1+b1 install ok installed libxau6:amd64 libxau6 1:1.0.9-1+b1 install ok installed libxbean-reflect-java libxbean-reflect-java 4.5-8 install ok installed libxcb-dri2-0:amd64 libxcb-dri2-0 1.17.0-2 install ok installed libxcb-dri3-0:amd64 libxcb-dri3-0 1.17.0-2 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.17.0-2 install ok installed libxcb-present0:amd64 libxcb-present0 1.17.0-2 install ok installed libxcb-randr0:amd64 libxcb-randr0 1.17.0-2 install ok installed libxcb-render0:amd64 libxcb-render0 1.17.0-2 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.17.0-2 install ok installed libxcb-sync1:amd64 libxcb-sync1 1.17.0-2 install ok installed libxcb-xfixes0:amd64 libxcb-xfixes0 1.17.0-2 install ok installed libxcb1:amd64 libxcb1 1.17.0-2 install ok installed libxcomposite1:amd64 libxcomposite1 1:0.4.5-1+b1 install ok installed libxcursor1:amd64 libxcursor1 1:1.2.2-1 install ok installed libxdamage1:amd64 libxdamage1 1:1.1.6-1+b1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3+b1 install ok installed libxerces2-java libxerces2-java 2.12.2-1 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b1 install ok installed libxfixes3:amd64 libxfixes3 1:6.0.0-2+b1 install ok installed libxi6:amd64 libxi6 2:1.8.2-1 install ok installed libxinerama1:amd64 libxinerama1 2:1.1.4-3+b1 install ok installed libxkbcommon0:amd64 libxkbcommon0 1.6.0-1+b1 install ok installed libxml-commons-external-java libxml-commons-external-java 1.4.01-6 install ok installed libxml-commons-resolver1.1-java libxml-commons-resolver1.1-java 1.2-11 install ok installed libxml2:amd64 libxml2 2.12.7+dfsg+really2.9.14-0.1 install ok installed libxpp3-java libxpp3-java 1.1.4c-3 install ok installed libxrandr2:amd64 libxrandr2 2:1.5.4-1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1.1+b1 install ok installed libxshmfence1:amd64 libxshmfence1 1.3-1+b1 install ok installed libxsom-java libxsom-java 2.3.0.1-10.1 install ok installed libxstream-java libxstream-java 1.4.20-1 install ok installed libxtst6:amd64 libxtst6 2:1.2.3-1.1+b1 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.4-1+b2 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libxz-java libxz-java 1.9-1 install ok installed libz3-4:amd64 libz3-4 4.8.12-3.1+b2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mesa-libgallium:amd64 mesa-libgallium 24.2.4-1 install ok installed mount mount 2.40.2-9 install ok installed ncbi-vdb-data ncbi-vdb-data 3.0.2+dfsg-2 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openjdk-17-jre:amd64 openjdk-17-jre 17.0.13~6ea-1 install ok installed openjdk-17-jre-headless:amd64 openjdk-17-jre-headless 17.0.13~6ea-1 install ok installed openjdk-21-jre:amd64 openjdk-21-jre 21.0.5~8ea-1 install ok installed openjdk-21-jre-headless:amd64 openjdk-21-jre-headless 21.0.5~8ea-1 install ok installed openssl openssl 3.3.2-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed procps procps 2:4.0.4-6 install ok installed sed sed 4.9-2 install ok installed shared-mime-info shared-mime-info 2.4-5+b1 install ok installed systemd systemd 256.6-1 install ok installed systemd-sysv systemd-sysv 256.6-1 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-2 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed util-linux-extra util-linux-extra 2.40.2-9 install ok installed varna varna 3-93+ds-6 install ok installed x11-common x11-common 1:7.7+23.1 install ok installed xkb-data xkb-data 2.42-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 1m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'remove', 'adwaita-icon-theme', 'ant', 'ant-optional', 'antlr', 'at-spi2-common', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'groovy', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'ivy', 'java-common', 'javahelp2', 'junit4', 'libactivation-java', 'libandroid-json-org-java', 'libantlr-java', 'libantlr4-runtime-java', 'libaopalliance-java', 'libapache-mime4j-java', 'libapache-pom-java', 'libapfloat-java', 'libapparmor1:amd64', 'libargs4j-java', 'libasm-java', 'libasound2-data', 'libasound2t64:amd64', 'libatinject-jsr330-api-java', 'libatk-bridge2.0-0t64:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libaxis-java', 'libbiojava6-java', 'libbrotli1:amd64', 'libbsf-java', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcastor-core-java', 'libcastor-xml-java', 'libcdi-api-java', 'libciftools-java', 'libcloudproviders0:amd64', 'libcodemodel-java', 'libcolord2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-compress-java', 'libcommons-discovery-java', 'libcommons-exec-java', 'libcommons-httpclient-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-math-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libcommons-text-java', 'libcups2t64:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdeflate0:amd64', 'libdom4j-java', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdtd-parser-java', 'libedit2:amd64', 'libel-api-java', 'libelf1t64:amd64', 'libepoxy0:amd64', 'liberror-prone-java', 'libexec-maven-plugin-java', 'libexpat1:amd64', 'libfastinfoset-java', 'libfastutil-java', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgbm1:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgeronimo-annotation-1.3-spec-java', 'libgeronimo-interceptor-3.0-spec-java', 'libgif7:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglib2.0-0t64:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgmbal-commons-java', 'libgmbal-java', 'libgmbal-pfl-java', 'libgoogle-gson-java', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-common', 'libgtk2.0-0:amd64', 'libgtk2.0-0t64:amd64', 'libgtk2.0-common', 'libguava-java', 'libguice-java', 'libhamcrest-java', 'libharfbuzz0b:amd64', 'libhawtjni-runtime-java', 'libhtsjdk-java', 'libhttpclient-java', 'libhttpcore-java', 'libhttpmime-java', 'libicu72:amd64', 'libinchi1', 'libinchi1.07', 'libintervalstorej-java', 'libisorelax-java', 'libistack-commons-java', 'libitext5-java', 'libjaba-client-java', 'libjackson2-annotations-java', 'libjackson2-core-java', 'libjackson2-databind-java', 'libjansi-java', 'libjansi-native-java', 'libjansi1-java', 'libjaxb-api-java', 'libjaxb-java', 'libjaxen-java', 'libjaxrs-api-java', 'libjaxws-api-java', 'libjaxws-java', 'libjbig0:amd64', 'libjersey1-client-java', 'libjersey1-core-java', 'libjetty9-java', 'libjfreesvg-java', 'libjgrapht-java', 'libjgraphx-java', 'libjheaps-java', 'libjline2-java', 'libjmol-java', 'libjni-inchi-java', 'libjni-inchi-jni', 'libjpeg62-turbo:amd64', 'libjson-simple-java', 'libjsoup-java', 'libjsp-api-java', 'libjsr305-java', 'libjsr311-api-java', 'libjswingreader-java', 'libjws-api-java', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libknopflerfish-osgi-framework-java', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblcms2-2:amd64', 'liblerc4:amd64', 'liblightcouch-java', 'libllvm15:amd64', 'libllvm18:amd64', 'libllvm19:amd64', 'liblog4j1.2-java', 'liblog4j2-java', 'libmail-java', 'libmaven-archiver-java', 'libmaven-compiler-plugin-java', 'libmaven-file-management-java', 'libmaven-jar-plugin-java', 'libmaven-parent-java', 'libmaven-resolver-java', 'libmaven-shared-incremental-java', 'libmaven-shared-io-java', 'libmaven-shared-utils-java', 'libmaven3-core-java', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmetro-policy-java', 'libmiglayout-java', 'libmimepull-java', 'libmjson-java', 'libmmtf-java', 'libmongodb-java', 'libmsgpack-java', 'libmsv-java', 'libnaga-java', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncursesw6:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libpixman-1-0:amd64', 'libplexus-archiver-java', 'libplexus-cipher-java', 'libplexus-classworlds-java', 'libplexus-compiler-java', 'libplexus-component-annotations-java', 'libplexus-container-default-java', 'libplexus-interpolation-java', 'libplexus-io-java', 'libplexus-languages-java', 'libplexus-sec-dispatcher-java', 'libplexus-utils2-java', 'libpng16-16t64:amd64', 'libproc2-0:amd64', 'libqdox-java', 'libqdox2-java', 'librelaxng-datatype-java', 'librhino-java', 'librngom-java', 'libsaaj-java', 'libsaaj-ri-java', 'libsensors-config', 'libsensors5:amd64', 'libservlet-api-java', 'libsharpyuv0:amd64', 'libsisu-inject-java', 'libsisu-plexus-java', 'libslf4j-java', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libstax-ex-java', 'libstax2-api-java', 'libstreambuffer-java', 'libsystemd-shared:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtxw2-java', 'libvamsas-client-java', 'libvecmath-java', 'libvulkan1:amd64', 'libwagon-http-java', 'libwagon-provider-api-java', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebsocket-api-java', 'libwoodstox-java', 'libwsdl4j-java', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxbean-reflect-java', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2:amd64', 'libxpp3-java', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxsom-java', 'libxstream-java', 'libxtst6:amd64', 'libxxf86vm1:amd64', 'libxz-java', 'libz3-4:amd64', 'mesa-libgallium:amd64', 'ncbi-vdb-data', 'openjdk-17-jre:amd64', 'openjdk-17-jre-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openssl', 'procps', 'shared-mime-info', 'systemd', 'systemd-sysv', 'varna', 'x11-common', 'xkb-data', 'jalview'] 1m12.3s DUMP: Reading package lists... Building dependency tree... Reading state information... Package 'libglib2.0-0' is not installed, so not removed Package 'libgtk2.0-0' is not installed, so not removed The following packages will be REMOVED: adwaita-icon-theme ant ant-optional antlr at-spi2-common ca-certificates ca-certificates-java dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jre default-jre-headless fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono groovy gtk-update-icon-cache hicolor-icon-theme ivy jalview java-common javahelp2 junit4 libactivation-java libandroid-json-org-java libantlr-java libantlr4-runtime-java libaopalliance-java libapache-mime4j-java libapache-pom-java libapfloat-java libapparmor1 libargs4j-java libasm-java libasound2-data libasound2t64 libatinject-jsr330-api-java libatk-bridge2.0-0t64 libatk1.0-0t64 libatomic1 libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 libaxis-java libbiojava6-java libbrotli1 libbsf-java libcairo-gobject2 libcairo2 libcastor-core-java libcastor-xml-java libcdi-api-java libciftools-java libcloudproviders0 libcodemodel-java libcolord2 libcommons-cli-java libcommons-codec-java libcommons-compress-java libcommons-discovery-java libcommons-exec-java libcommons-httpclient-java libcommons-io-java libcommons-jexl2-java libcommons-lang-java libcommons-lang3-java libcommons-logging-java libcommons-math-java libcommons-math3-java libcommons-parent-java libcommons-text-java libcups2t64 libdatrie1 libdbus-1-3 libdconf1 libdeflate0 libdom4j-java libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libdtd-parser-java libedit2 libel-api-java libelf1t64 libepoxy0 liberror-prone-java libexec-maven-plugin-java libexpat1 libfastinfoset-java libfastutil-java libfontconfig1 libfreetype6 libfribidi0 libgbm1 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgeronimo-annotation-1.3-spec-java libgeronimo-interceptor-3.0-spec-java libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0t64 libglvnd0 libglx-mesa0 libglx0 libgmbal-commons-java libgmbal-java libgmbal-pfl-java libgoogle-gson-java libgraphite2-3 libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-common libgtk2.0-0t64 libgtk2.0-common libguava-java libguice-java libhamcrest-java libharfbuzz0b libhawtjni-runtime-java libhtsjdk-java libhttpclient-java libhttpcore-java libhttpmime-java libicu72 libinchi1 libinchi1.07 libintervalstorej-java libisorelax-java libistack-commons-java libitext5-java libjaba-client-java libjackson2-annotations-java libjackson2-core-java libjackson2-databind-java libjansi-java libjansi-native-java libjansi1-java libjaxb-api-java libjaxb-java libjaxen-java libjaxrs-api-java libjaxws-api-java libjaxws-java libjbig0 libjersey1-client-java libjersey1-core-java libjetty9-java libjfreesvg-java libjgrapht-java libjgraphx-java libjheaps-java libjline2-java libjmol-java libjni-inchi-java libjni-inchi-jni libjpeg62-turbo libjson-simple-java libjsoup-java libjsp-api-java libjsr305-java libjsr311-api-java libjswingreader-java libjws-api-java libk5crypto3 libkeyutils1 libknopflerfish-osgi-framework-java libkrb5-3 libkrb5support0 liblcms2-2 liblerc4 liblightcouch-java libllvm15 libllvm18 libllvm19 liblog4j1.2-java liblog4j2-java libmail-java libmaven-archiver-java libmaven-compiler-plugin-java libmaven-file-management-java libmaven-jar-plugin-java libmaven-parent-java libmaven-resolver-java libmaven-shared-incremental-java libmaven-shared-io-java libmaven-shared-utils-java libmaven3-core-java libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmetro-policy-java libmiglayout-java libmimepull-java libmjson-java libmmtf-java libmongodb-java libmsgpack-java libmsv-java libnaga-java libncbi-ngs3 libncbi-vdb3 libncursesw6 libngs-java libngs-jni libnspr4 libnss3 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libpixman-1-0 libplexus-archiver-java libplexus-cipher-java libplexus-classworlds-java libplexus-compiler-java libplexus-component-annotations-java libplexus-container-default-java libplexus-interpolation-java libplexus-io-java libplexus-languages-java libplexus-sec-dispatcher-java libplexus-utils2-java libpng16-16t64 libproc2-0 libqdox-java libqdox2-java librelaxng-datatype-java librhino-java librngom-java libsaaj-java libsaaj-ri-java libsensors-config libsensors5 libservlet-api-java libsharpyuv0 libsisu-inject-java libsisu-plexus-java libslf4j-java libsnappy-java libsnappy-jni libsnappy1v5 libsqlite3-0 libstax-ex-java libstax2-api-java libstreambuffer-java libsystemd-shared libthai-data libthai0 libtiff6 libtxw2-java libvamsas-client-java libvecmath-java libvulkan1 libwagon-http-java libwagon-provider-api-java libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libwebsocket-api-java libwoodstox-java libwsdl4j-java libx11-6 libx11-data libx11-xcb1 libxau6 libxbean-reflect-java libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxpp3-java libxrandr2 libxrender1 libxshmfence1 libxsom-java libxstream-java libxtst6 libxxf86vm1 libxz-java libz3-4 mesa-libgallium ncbi-vdb-data openjdk-17-jre openjdk-17-jre-headless openjdk-21-jre openjdk-21-jre-headless openssl procps shared-mime-info systemd systemd-sysv varna x11-common xkb-data 0 upgraded, 0 newly installed, 329 to remove and 0 not upgraded. After this operation, 1225 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17107 files and directories currently installed.) Removing jalview (2.11.4.0+dfsg-3) ... Removing varna (3-93+ds-6) ... Removing javahelp2 (2.0.05.ds1-10) ... Removing default-jre (2:1.21-76) ... Removing openjdk-21-jre:amd64 (21.0.5~8ea-1) ... Removing openjdk-17-jre:amd64 (17.0.13~6ea-1) ... Removing libgtk-3-0t64:amd64 (3.24.43-4) ... Removing libgtk2.0-0t64:amd64 (2.24.33-6) ... Removing adwaita-icon-theme (47.0-1) ... Removing libjaba-client-java (2.2.0-2) ... Removing libjaxws-java (2.3.0.2-2) ... Removing libmetro-policy-java (2.7.2-4) ... Removing libwoodstox-java (1:6.2.1-1) ... Removing libmsv-java (2009.1+dfsg1-6) ... Removing groovy (2.4.21-10) ... Removing antlr (2.7.7+dfsg-14) ... Removing libatk-bridge2.0-0t64:amd64 (2.54.0-1) ... Removing libatk1.0-0t64:amd64 (2.54.0-1) ... Removing at-spi2-common (2.54.0-1) ... Removing junit4 (4.13.2-4) ... Removing ivy (2.5.2-1) ... Removing default-jre-headless (2:1.21-76) ... Removing openjdk-21-jre-headless:amd64 (21.0.5~8ea-1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Removing libgtk-3-common (3.24.43-4) ... Removing dconf-gsettings-backend:amd64 (0.40.0-4+b2) ... Removing dconf-service (0.40.0-4+b2) ... Removing dbus-user-session (1.14.10-4+b1) ... Removing libpam-systemd:amd64 (256.6-1) ... Removing dbus (1.14.10-4+b1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of stop. Removing dbus-daemon (1.14.10-4+b1) ... Removing dbus-bin (1.14.10-4+b1) ... Removing dbus-session-bus-common (1.14.10-4) ... Removing dbus-system-bus-common (1.14.10-4) ... Removing libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... Removing libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... Removing libpango-1.0-0:amd64 (1.54.0+ds-2) ... Removing fontconfig (2.15.0-1.1) ... Removing libcairo-gobject2:amd64 (1.18.2-2) ... Removing libcairo2:amd64 (1.18.2-2) ... Removing libfontconfig1:amd64 (2.15.0-1.1) ... Removing fontconfig-config (2.15.0-1.1) ... Removing fonts-dejavu-core (2.37-8) ... Removing fonts-dejavu-mono (2.37-8) ... Removing gtk-update-icon-cache (4.16.3+ds-1) ... Removing hicolor-icon-theme (0.18-1) ... Removing libsaaj-ri-java (1.4.1-1.1) ... Removing libjaxws-api-java (2.3.0-1.1) ... Removing libsaaj-java (1.4.0-4) ... Removing libandroid-json-org-java (20121204-20090211-5) ... Removing libantlr-java (2.7.7+dfsg-14) ... Removing libbiojava6-java (6.1.0+dfsg-4) ... Removing libjgrapht-java (1.5.2-1) ... Removing libantlr4-runtime-java (4.9.2-2) ... Removing libmmtf-java (1.0.11-1) ... Removing libmsgpack-java (0.9.6-1) ... Removing libjmol-java (16.2.15+dfsg-1) ... Removing libjni-inchi-java (0.8+dfsg-8) ... Removing libmaven-compiler-plugin-java (3.10.1-2) ... Removing libplexus-compiler-java (2.12.1-3) ... Removing libcommons-text-java (1.11.0-1) ... Removing libmaven-jar-plugin-java (3.3.0-2) ... Removing libapache-mime4j-java (0.8.11-1) ... Removing libvamsas-client-java (0.2+dfsg-2) ... Removing libapfloat-java (1.13.0-1) ... Removing systemd-sysv (256.6-1) ... Removing systemd (256.6-1) ... Removing libsystemd-shared:amd64 (256.6-1) ... Removing libapparmor1:amd64 (3.1.7-1+b1) ... Removing libplexus-languages-java (1.1.1-2) ... Removing libasm-java (9.7-2) ... Removing libasound2t64:amd64 (1.2.12-1) ... Removing libasound2-data (1.2.12-1) ... Removing libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ... Removing shared-mime-info (2.4-5+b1) ... Removing libcloudproviders0:amd64 (0.3.6-1) ... Removing libatspi2.0-0t64:amd64 (2.54.0-1) ... Removing libcups2t64:amd64 (2.4.10-2) ... Removing libavahi-client3:amd64 (0.8-13+b2) ... Removing libavahi-common3:amd64 (0.8-13+b2) ... Removing libavahi-common-data:amd64 (0.8-13+b2) ... Removing libaxis-java (1.4-29) ... Removing libharfbuzz0b:amd64 (9.0.0-1) ... Removing libfreetype6:amd64 (2.13.3+dfsg-1) ... Removing libbrotli1:amd64 (1.1.0-2+b4) ... Removing libbsf-java (1:2.4.0-8) ... Removing libcastor-xml-java (1.3.2-7) ... Removing libcastor-core-java (1.3.2-7) ... Removing libciftools-java (6.0.0-1) ... Removing libcolord2:amd64 (1.4.7-1+b1) ... Removing libhttpmime-java (4.5.14-1) ... Removing libcommons-httpclient-java (3.1-16) ... Removing libmaven-archiver-java (3.6.0-1) ... Removing libhtsjdk-java (4.1.0+dfsg-2) ... Removing libcommons-discovery-java (0.5-4) ... Removing libexec-maven-plugin-java (3.1.0-2) ... Removing libcommons-exec-java (1.3-2) ... Removing libmaven-shared-incremental-java (1.1-4) ... Removing libcommons-jexl2-java (2.1.1-6) ... Removing libcommons-lang-java (2.6-10) ... Removing libcommons-math-java (2.2-8) ... Removing libcommons-math3-java (3.6.1-3) ... Removing libthai0:amd64 (0.1.29-2) ... Removing libdatrie1:amd64 (0.2.13-3) ... Removing libdbus-1-3:amd64 (1.14.10-4+b1) ... Removing libdconf1:amd64 (0.40.0-4+b2) ... Removing libtiff6:amd64 (4.5.1+git230720-5) ... Removing libdeflate0:amd64 (1.21-1) ... Removing libgl1:amd64 (1.7.0-1+b1) ... Removing libglx0:amd64 (1.7.0-1+b1) ... Removing libglx-mesa0:amd64 (24.2.4-1) ... Removing libgl1-mesa-dri:amd64 (24.2.4-1) ... Removing libgbm1:amd64 (24.2.4-1) ... Removing mesa-libgallium:amd64 (24.2.4-1) ... Removing libdrm-amdgpu1:amd64 (2.4.123-1) ... Removing libdrm-radeon1:amd64 (2.4.123-1) ... Removing libdrm-intel1:amd64 (2.4.123-1) ... Removing libdrm-nouveau2:amd64 (2.4.123-1) ... Removing libllvm15:amd64 (1:15.0.6-4+b1) ... Removing libllvm19:amd64 (1:19.1.1-1) ... Removing libjetty9-java (9.4.55-1) ... Removing libel-api-java (3.0.0-3) ... Removing libelf1t64:amd64 (0.191-2) ... Removing libepoxy0:amd64 (1.5.10-2) ... Removing libplexus-container-default-java (2.1.1-1) ... Removing libexpat1:amd64 (2.6.3-1) ... Removing libfastutil-java (8.5.14+dfsg-1) ... Removing libfribidi0:amd64 (1.0.15-1) ... Removing libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... Removing libgif7:amd64 (5.2.2-1) ... Removing libglapi-mesa:amd64 (24.2.4-1) ... Removing libglvnd0:amd64 (1.7.0-1+b1) ... Removing libgmbal-java (4.0.0-b002-1.1) ... Removing libgmbal-commons-java (3.2.1-b003-1.1) ... Removing libgmbal-pfl-java (4.0.1-b003-2) ... Removing liblog4j2-java (2.19.0-2) ... Removing liblightcouch-java (0.2.0-1) ... Removing libgoogle-gson-java (2.10.1-1) ... Removing libgraphite2-3:amd64 (1.3.14-2) ... Removing libgssapi-krb5-2:amd64 (1.21.3-3) ... Removing libgtk2.0-common (2.24.33-6) ... Removing libhamcrest-java (2.2-2) ... Removing libjline2-java (2.14.6-5) ... Removing libjansi1-java (1.18-3) ... Removing libjansi-native-java (1.8-2) ... Removing libhawtjni-runtime-java (1.18-1) ... Removing libllvm18:amd64 (1:18.1.8-12) ... Removing libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Removing libicu72:amd64 (72.1-5) ... Removing libinchi1 (1.03+dfsg-4+b2) ... Removing libjni-inchi-jni (0.8+dfsg-8) ... Removing libinchi1.07 (1.07.1+dfsg-4) ... Removing libintervalstorej-java (1.2+dfsg-5) ... Removing libisorelax-java (20041111-14) ... Removing libitext5-java (5.5.13.3-4) ... Removing libjackson2-databind-java (2.14.0-1) ... Removing libjackson2-annotations-java (2.14.0-1) ... Removing libjackson2-core-java (2.14.1-1) ... Removing libjansi-java (2.4.1-2) ... Removing libjaxrs-api-java (2.1.2-2) ... Removing libjbig0:amd64 (2.1-6.1+b1) ... Removing libjersey1-client-java (1.19.3-8) ... Removing libjersey1-core-java (1.19.3-8) ... Removing libjfreesvg-java (4.1-2) ... Removing libjgraphx-java (2.1.0.7-4) ... Removing libjheaps-java (0.14-2) ... Removing libjson-simple-java (2.3.0-1) ... Removing libjsp-api-java (2.3.4-3) ... Removing libjsr311-api-java (1.1.1-1.1) ... Removing libjswingreader-java (0.3-4) ... Removing libjws-api-java (1.1-2) ... Removing libkrb5-3:amd64 (1.21.3-3) ... Removing libk5crypto3:amd64 (1.21.3-3) ... Removing libkeyutils1:amd64 (1.6.3-3) ... Removing libknopflerfish-osgi-framework-java (6.1.1-3.1) ... Removing libkrb5support0:amd64 (1.21.3-3) ... Removing liblerc4:amd64 (4.0.0+ds-4+b1) ... Removing liblog4j1.2-java (1.2.17-11) ... Removing libmail-java (1.6.5-2) ... Removing libngs-java:amd64 (3.0.3+dfsg-9) ... Removing libngs-jni:amd64 (3.0.3+dfsg-9) ... Removing libncbi-ngs3:amd64 (3.0.3+dfsg-9) ... Removing libncbi-vdb3:amd64 (3.0.2+dfsg-2+b1) ... Removing libmbedtls14t64:amd64 (2.28.8-1) ... Removing libmbedx509-1t64:amd64 (2.28.8-1) ... Removing libmbedcrypto7t64:amd64 (2.28.8-1) ... Removing libmiglayout-java (11.1+ds-1) ... Removing libmimepull-java (1.9.7-2) ... Removing libmjson-java (1.4.0-3) ... Removing libmongodb-java (3.6.3-2) ... Removing libnaga-java (3.0+svn80-5) ... Removing procps (2:4.0.4-6) ... Removing libncursesw6:amd64 (6.5-2) ... Removing libpciaccess0:amd64 (0.17-3+b1) ... Removing libpixman-1-0:amd64 (0.42.2-1+b1) ... Removing libpng16-16t64:amd64 (1.6.44-2) ... Removing libproc2-0:amd64 (2:4.0.4-6) ... Removing libqdox-java (1.12.1-3) ... Removing libqdox2-java (2.0.3-1) ... Removing librhino-java (1.7.14-2.1) ... Removing libsensors5:amd64 (1:3.6.0-10) ... Removing libsensors-config (1:3.6.0-10) ... Removing libservlet-api-java (4.0.1-2) ... Removing libwebp7:amd64 (1.4.0-0.1) ... Removing libsharpyuv0:amd64 (1.4.0-0.1) ... Removing libstax2-api-java (4.1-1) ... Removing libthai-data (0.1.29-2) ... Removing libvecmath-java (1.5.2-7) ... Removing libvulkan1:amd64 (1.3.290.0-1) ... Removing libwayland-cursor0:amd64 (1.23.0-1) ... Removing libwayland-client0:amd64 (1.23.0-1) ... Removing libwayland-egl1:amd64 (1.23.0-1) ... Removing libwayland-server0:amd64 (1.23.0-1) ... Removing libwebsocket-api-java (1.1-2) ... Removing libwsdl4j-java (1.6.3-4.1) ... Removing libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Removing libxtst6:amd64 (2:1.2.3-1.1+b1) ... Removing libx11-xcb1:amd64 (2:1.8.7-1+b1) ... Removing libxcb-xfixes0:amd64 (1.17.0-2) ... Removing libxcb-sync1:amd64 (1.17.0-2) ... Removing libxbean-reflect-java (4.5-8) ... Removing libxcb-dri2-0:amd64 (1.17.0-2) ... Removing libxcb-dri3-0:amd64 (1.17.0-2) ... Removing libxcb-glx0:amd64 (1.17.0-2) ... Removing libxcb-present0:amd64 (1.17.0-2) ... Removing libxcb-randr0:amd64 (1.17.0-2) ... Removing libxcb-render0:amd64 (1.17.0-2) ... Removing libxcb-shm0:amd64 (1.17.0-2) ... Removing libxcomposite1:amd64 (1:0.4.5-1+b1) ... Removing libxcursor1:amd64 (1:1.2.2-1) ... Removing libxdamage1:amd64 (1:1.1.6-1+b1) ... Removing libxerces2-java (2.12.2-1) ... Removing libxrandr2:amd64 (2:1.5.4-1) ... Removing libxfixes3:amd64 (1:6.0.0-2+b1) ... Removing libxi6:amd64 (2:1.8.2-1) ... Removing libxinerama1:amd64 (2:1.1.4-3+b1) ... Removing libxkbcommon0:amd64 (1.6.0-1+b1) ... Removing libxml-commons-external-java (1.4.01-6) ... Removing libxstream-java (1.4.20-1) ... Removing libxpp3-java (1.1.4c-3) ... Removing libxrender1:amd64 (1:0.9.10-1.1+b1) ... Removing libxshmfence1:amd64 (1.3-1+b1) ... Removing libz3-4:amd64 (4.8.12-3.1+b2) ... Removing ncbi-vdb-data (3.0.2+dfsg-2) ... Removing x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing xkb-data (2.42-1) ... Removing libjaxb-java (2.3.0.1-10.1) ... Removing libfastinfoset-java (1.2.12-3) ... Removing libstreambuffer-java (1.5.4-1.1) ... Removing libstax-ex-java (1.7.8-3) ... Removing libtxw2-java (2.3.0.1-10.1) ... Removing libglib2.0-0t64:amd64 (2.82.1-1) ... Removing libatomic1:amd64 (14.2.0-6) ... Removing libdrm2:amd64 (2.4.123-1) ... Removing libdrm-common (2.4.123-1) ... Removing libdtd-parser-java (1.2-1) ... Removing libedit2:amd64 (3.1-20240808-1) ... Removing libjaxb-api-java (2.3.1-1) ... Removing libxsom-java (2.3.0.1-10.1) ... Removing librngom-java (2.3.0.1-10.1) ... Removing librelaxng-datatype-java (1.0+ds1-3.1) ... Removing libxext6:amd64 (2:1.3.4-1+b1) ... Removing libxml-commons-resolver1.1-java (1.2-11) ... Removing libx11-6:amd64 (2:1.8.7-1+b1) ... Removing libx11-data (2:1.8.7-1) ... Removing libxcb1:amd64 (1.17.0-2) ... Removing libxau6:amd64 (1:1.0.9-1+b1) ... Removing libxdmcp6:amd64 (1:1.1.2-3+b1) ... Removing libcodemodel-java (2.6+jaxb2.3.0.1-10.1) ... Removing libistack-commons-java (3.0.6-5) ... Removing ant-optional (1.10.15-1) ... Removing ant (1.10.15-1) ... Removing openjdk-17-jre-headless:amd64 (17.0.13~6ea-1) ... Removing ca-certificates-java (20240118) ... Removing ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing java-common (0.76) ... Removing libactivation-java (1.2.0-2) ... Removing libmaven-file-management-java (3.0.0-1) ... Removing libmaven-shared-io-java (3.0.0-4) ... Removing libmaven3-core-java (3.8.8-1) ... Removing libguice-java (4.2.3-2) ... Removing libaopalliance-java (20070526-7) ... Removing libmaven-parent-java (35-1) ... Removing libargs4j-java (2.33-2) ... Removing libplexus-sec-dispatcher-java (2.0-3) ... Removing libplexus-cipher-java (2.0-1) ... Removing libsisu-plexus-java (0.3.4-3) ... Removing libsisu-inject-java (0.3.4-2) ... Removing libcdi-api-java (1.2-3) ... Removing libcommons-cli-java (1.6.0-1) ... Removing libwagon-http-java (3.5.3-1) ... Removing libhttpclient-java (4.5.14-1) ... Removing libcommons-codec-java (1.16.0-1) ... Removing libplexus-archiver-java (4.6.1-1) ... Removing libcommons-compress-java (1.25.0-1) ... Removing libplexus-io-java (3.3.1-2) ... Removing libmaven-shared-utils-java (3.3.4-1) ... Removing libcommons-io-java (2.16.1-1) ... Removing libmaven-resolver-java (1.6.3-1) ... Removing libcommons-lang3-java (3.14.0-1) ... Removing libdom4j-java (2.1.4-1) ... Removing libguava-java (32.0.1-1) ... Removing libgeronimo-annotation-1.3-spec-java (1.3-1) ... Removing libgeronimo-interceptor-3.0-spec-java (1.0.1-4) ... Removing libhttpcore-java (4.4.16-1) ... Removing libjaxen-java (1.1.6-4) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-3) ... Removing libjsoup-java (1.15.3-1) ... Removing libjsr305-java (0.1~+svn49-11) ... Removing liblcms2-2:amd64 (2.14-2+b1) ... Removing libnss3:amd64 (2:3.105-2) ... Removing libnspr4:amd64 (2:4.35-1.1+b1) ... Removing libpcsclite1:amd64 (2.3.0-1) ... Removing libplexus-classworlds-java (2.7.0-1) ... Removing libplexus-component-annotations-java (2.1.1-1) ... Removing libplexus-interpolation-java (1.26-1) ... Removing libwagon-provider-api-java (3.5.3-1) ... Removing libplexus-utils2-java (3.4.2-1) ... Removing libslf4j-java (1.7.32-1) ... Removing libsnappy-java (1.1.10.5-2) ... Removing libsnappy-jni (1.1.10.5-2) ... Removing libsnappy1v5:amd64 (1.2.1-1) ... Removing libsqlite3-0:amd64 (3.46.1-1) ... Removing libxz-java (1.9-1) ... Removing openssl (3.3.2-1) ... Removing libcommons-logging-java (1.3.0-1) ... Removing libcommons-parent-java (56-1) ... Removing libapache-pom-java (29-2) ... Removing libatinject-jsr330-api-java (1.0+ds1-5) ... Removing liberror-prone-java (2.18.0-1) ... Processing triggers for libc-bin (2.40-3) ... 1m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'remove', 'adwaita-icon-theme', 'ant', 'ant-optional', 'antlr', 'at-spi2-common', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'groovy', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'ivy', 'java-common', 'javahelp2', 'junit4', 'libactivation-java', 'libandroid-json-org-java', 'libantlr-java', 'libantlr4-runtime-java', 'libaopalliance-java', 'libapache-mime4j-java', 'libapache-pom-java', 'libapfloat-java', 'libapparmor1:amd64', 'libargs4j-java', 'libasm-java', 'libasound2-data', 'libasound2t64:amd64', 'libatinject-jsr330-api-java', 'libatk-bridge2.0-0t64:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libaxis-java', 'libbiojava6-java', 'libbrotli1:amd64', 'libbsf-java', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcastor-core-java', 'libcastor-xml-java', 'libcdi-api-java', 'libciftools-java', 'libcloudproviders0:amd64', 'libcodemodel-java', 'libcolord2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-compress-java', 'libcommons-discovery-java', 'libcommons-exec-java', 'libcommons-httpclient-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-math-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libcommons-text-java', 'libcups2t64:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdeflate0:amd64', 'libdom4j-java', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdtd-parser-java', 'libedit2:amd64', 'libel-api-java', 'libelf1t64:amd64', 'libepoxy0:amd64', 'liberror-prone-java', 'libexec-maven-plugin-java', 'libexpat1:amd64', 'libfastinfoset-java', 'libfastutil-java', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgbm1:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgeronimo-annotation-1.3-spec-java', 'libgeronimo-interceptor-3.0-spec-java', 'libgif7:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglib2.0-0t64:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgmbal-commons-java', 'libgmbal-java', 'libgmbal-pfl-java', 'libgoogle-gson-java', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-common', 'libgtk2.0-0:amd64', 'libgtk2.0-0t64:amd64', 'libgtk2.0-common', 'libguava-java', 'libguice-java', 'libhamcrest-java', 'libharfbuzz0b:amd64', 'libhawtjni-runtime-java', 'libhtsjdk-java', 'libhttpclient-java', 'libhttpcore-java', 'libhttpmime-java', 'libicu72:amd64', 'libinchi1', 'libinchi1.07', 'libintervalstorej-java', 'libisorelax-java', 'libistack-commons-java', 'libitext5-java', 'libjaba-client-java', 'libjackson2-annotations-java', 'libjackson2-core-java', 'libjackson2-databind-java', 'libjansi-java', 'libjansi-native-java', 'libjansi1-java', 'libjaxb-api-java', 'libjaxb-java', 'libjaxen-java', 'libjaxrs-api-java', 'libjaxws-api-java', 'libjaxws-java', 'libjbig0:amd64', 'libjersey1-client-java', 'libjersey1-core-java', 'libjetty9-java', 'libjfreesvg-java', 'libjgrapht-java', 'libjgraphx-java', 'libjheaps-java', 'libjline2-java', 'libjmol-java', 'libjni-inchi-java', 'libjni-inchi-jni', 'libjpeg62-turbo:amd64', 'libjson-simple-java', 'libjsoup-java', 'libjsp-api-java', 'libjsr305-java', 'libjsr311-api-java', 'libjswingreader-java', 'libjws-api-java', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libknopflerfish-osgi-framework-java', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblcms2-2:amd64', 'liblerc4:amd64', 'liblightcouch-java', 'libllvm15:amd64', 'libllvm18:amd64', 'libllvm19:amd64', 'liblog4j1.2-java', 'liblog4j2-java', 'libmail-java', 'libmaven-archiver-java', 'libmaven-compiler-plugin-java', 'libmaven-file-management-java', 'libmaven-jar-plugin-java', 'libmaven-parent-java', 'libmaven-resolver-java', 'libmaven-shared-incremental-java', 'libmaven-shared-io-java', 'libmaven-shared-utils-java', 'libmaven3-core-java', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmetro-policy-java', 'libmiglayout-java', 'libmimepull-java', 'libmjson-java', 'libmmtf-java', 'libmongodb-java', 'libmsgpack-java', 'libmsv-java', 'libnaga-java', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncursesw6:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libpixman-1-0:amd64', 'libplexus-archiver-java', 'libplexus-cipher-java', 'libplexus-classworlds-java', 'libplexus-compiler-java', 'libplexus-component-annotations-java', 'libplexus-container-default-java', 'libplexus-interpolation-java', 'libplexus-io-java', 'libplexus-languages-java', 'libplexus-sec-dispatcher-java', 'libplexus-utils2-java', 'libpng16-16t64:amd64', 'libproc2-0:amd64', 'libqdox-java', 'libqdox2-java', 'librelaxng-datatype-java', 'librhino-java', 'librngom-java', 'libsaaj-java', 'libsaaj-ri-java', 'libsensors-config', 'libsensors5:amd64', 'libservlet-api-java', 'libsharpyuv0:amd64', 'libsisu-inject-java', 'libsisu-plexus-java', 'libslf4j-java', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libstax-ex-java', 'libstax2-api-java', 'libstreambuffer-java', 'libsystemd-shared:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtxw2-java', 'libvamsas-client-java', 'libvecmath-java', 'libvulkan1:amd64', 'libwagon-http-java', 'libwagon-provider-api-java', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebsocket-api-java', 'libwoodstox-java', 'libwsdl4j-java', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxbean-reflect-java', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2:amd64', 'libxpp3-java', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxsom-java', 'libxstream-java', 'libxtst6:amd64', 'libxxf86vm1:amd64', 'libxz-java', 'libz3-4:amd64', 'mesa-libgallium:amd64', 'ncbi-vdb-data', 'openjdk-17-jre:amd64', 'openjdk-17-jre-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openssl', 'procps', 'shared-mime-info', 'systemd', 'systemd-sysv', 'varna', 'x11-common', 'xkb-data', 'jalview'] 1m12.3s INFO: Running scripts post_remove 1m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_remove_exceptions'] 1m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_remove_exceptions'] 1m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg', '--purge', 'adwaita-icon-theme', 'ant', 'ant-optional', 'antlr', 'at-spi2-common', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'groovy', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'ivy', 'java-common', 'javahelp2', 'junit4', 'libactivation-java', 'libandroid-json-org-java', 'libantlr-java', 'libantlr4-runtime-java', 'libaopalliance-java', 'libapache-mime4j-java', 'libapache-pom-java', 'libapfloat-java', 'libapparmor1:amd64', 'libargs4j-java', 'libasm-java', 'libasound2-data', 'libasound2t64:amd64', 'libatinject-jsr330-api-java', 'libatk-bridge2.0-0t64:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libaxis-java', 'libbiojava6-java', 'libbrotli1:amd64', 'libbsf-java', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcastor-core-java', 'libcastor-xml-java', 'libcdi-api-java', 'libciftools-java', 'libcloudproviders0:amd64', 'libcodemodel-java', 'libcolord2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-compress-java', 'libcommons-discovery-java', 'libcommons-exec-java', 'libcommons-httpclient-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-math-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libcommons-text-java', 'libcups2t64:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdeflate0:amd64', 'libdom4j-java', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdtd-parser-java', 'libedit2:amd64', 'libel-api-java', 'libelf1t64:amd64', 'libepoxy0:amd64', 'liberror-prone-java', 'libexec-maven-plugin-java', 'libexpat1:amd64', 'libfastinfoset-java', 'libfastutil-java', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgbm1:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgeronimo-annotation-1.3-spec-java', 'libgeronimo-interceptor-3.0-spec-java', 'libgif7:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglib2.0-0t64:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgmbal-commons-java', 'libgmbal-java', 'libgmbal-pfl-java', 'libgoogle-gson-java', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-common', 'libgtk2.0-0:amd64', 'libgtk2.0-0t64:amd64', 'libgtk2.0-common', 'libguava-java', 'libguice-java', 'libhamcrest-java', 'libharfbuzz0b:amd64', 'libhawtjni-runtime-java', 'libhtsjdk-java', 'libhttpclient-java', 'libhttpcore-java', 'libhttpmime-java', 'libicu72:amd64', 'libinchi1', 'libinchi1.07', 'libintervalstorej-java', 'libisorelax-java', 'libistack-commons-java', 'libitext5-java', 'libjaba-client-java', 'libjackson2-annotations-java', 'libjackson2-core-java', 'libjackson2-databind-java', 'libjansi-java', 'libjansi-native-java', 'libjansi1-java', 'libjaxb-api-java', 'libjaxb-java', 'libjaxen-java', 'libjaxrs-api-java', 'libjaxws-api-java', 'libjaxws-java', 'libjbig0:amd64', 'libjersey1-client-java', 'libjersey1-core-java', 'libjetty9-java', 'libjfreesvg-java', 'libjgrapht-java', 'libjgraphx-java', 'libjheaps-java', 'libjline2-java', 'libjmol-java', 'libjni-inchi-java', 'libjni-inchi-jni', 'libjpeg62-turbo:amd64', 'libjson-simple-java', 'libjsoup-java', 'libjsp-api-java', 'libjsr305-java', 'libjsr311-api-java', 'libjswingreader-java', 'libjws-api-java', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libknopflerfish-osgi-framework-java', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblcms2-2:amd64', 'liblerc4:amd64', 'liblightcouch-java', 'libllvm15:amd64', 'libllvm18:amd64', 'libllvm19:amd64', 'liblog4j1.2-java', 'liblog4j2-java', 'libmail-java', 'libmaven-archiver-java', 'libmaven-compiler-plugin-java', 'libmaven-file-management-java', 'libmaven-jar-plugin-java', 'libmaven-parent-java', 'libmaven-resolver-java', 'libmaven-shared-incremental-java', 'libmaven-shared-io-java', 'libmaven-shared-utils-java', 'libmaven3-core-java', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmetro-policy-java', 'libmiglayout-java', 'libmimepull-java', 'libmjson-java', 'libmmtf-java', 'libmongodb-java', 'libmsgpack-java', 'libmsv-java', 'libnaga-java', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncursesw6:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libpixman-1-0:amd64', 'libplexus-archiver-java', 'libplexus-cipher-java', 'libplexus-classworlds-java', 'libplexus-compiler-java', 'libplexus-component-annotations-java', 'libplexus-container-default-java', 'libplexus-interpolation-java', 'libplexus-io-java', 'libplexus-languages-java', 'libplexus-sec-dispatcher-java', 'libplexus-utils2-java', 'libpng16-16t64:amd64', 'libproc2-0:amd64', 'libqdox-java', 'libqdox2-java', 'librelaxng-datatype-java', 'librhino-java', 'librngom-java', 'libsaaj-java', 'libsaaj-ri-java', 'libsensors-config', 'libsensors5:amd64', 'libservlet-api-java', 'libsharpyuv0:amd64', 'libsisu-inject-java', 'libsisu-plexus-java', 'libslf4j-java', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libstax-ex-java', 'libstax2-api-java', 'libstreambuffer-java', 'libsystemd-shared:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtxw2-java', 'libvamsas-client-java', 'libvecmath-java', 'libvulkan1:amd64', 'libwagon-http-java', 'libwagon-provider-api-java', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebsocket-api-java', 'libwoodstox-java', 'libwsdl4j-java', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxbean-reflect-java', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2:amd64', 'libxpp3-java', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxsom-java', 'libxstream-java', 'libxtst6:amd64', 'libxxf86vm1:amd64', 'libxz-java', 'libz3-4:amd64', 'mesa-libgallium:amd64', 'ncbi-vdb-data', 'openjdk-17-jre:amd64', 'openjdk-17-jre-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openssl', 'procps', 'shared-mime-info', 'systemd', 'systemd-sysv', 'varna', 'x11-common', 'xkb-data'] 1m12.6s DUMP: (Reading database ... 5433 files and directories currently installed.) Purging configuration files for adwaita-icon-theme (47.0-1) ... dpkg: warning: ignoring request to remove ant which isn't installed dpkg: warning: ignoring request to remove ant-optional which isn't installed dpkg: warning: ignoring request to remove antlr which isn't installed dpkg: warning: ignoring request to remove at-spi2-common which isn't installed Purging configuration files for ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for ca-certificates-java (20240118) ... Purging configuration files for dbus (1.14.10-4+b1) ... rmdir: failed to remove '/var/run/dbus': Directory not empty rmdir: failed to remove '/var/lib/dbus': Directory not empty dpkg: warning: while removing dbus, directory '/var/lib/dbus' not empty so not removed dpkg: warning: ignoring request to remove dbus-bin which isn't installed Purging configuration files for dbus-daemon (1.14.10-4+b1) ... dpkg: warning: ignoring request to remove dbus-session-bus-common which isn't installed dpkg: warning: ignoring request to remove dbus-system-bus-common which isn't installed Purging configuration files for dbus-user-session (1.14.10-4+b1) ... dpkg: warning: ignoring request to remove dconf-gsettings-backend which isn't installed dpkg: warning: ignoring request to remove dconf-service which isn't installed dpkg: warning: ignoring request to remove default-jre which isn't installed dpkg: warning: ignoring request to remove default-jre-headless which isn't installed Purging configuration files for fontconfig (2.15.0-1.1) ... Purging configuration files for fontconfig-config (2.15.0-1.1) ... dpkg: warning: while removing fontconfig-config, directory '/etc/fonts/conf.d' not empty so not removed Purging configuration files for fonts-dejavu-core (2.37-8) ... Purging configuration files for fonts-dejavu-mono (2.37-8) ... dpkg: warning: while removing fonts-dejavu-mono, directory '/etc/fonts' not empty so not removed Purging configuration files for groovy (2.4.21-10) ... dpkg: warning: ignoring request to remove gtk-update-icon-cache which isn't installed dpkg: warning: ignoring request to remove hicolor-icon-theme which isn't installed dpkg: warning: ignoring request to remove ivy which isn't installed Purging configuration files for java-common (0.76) ... dpkg: warning: ignoring request to remove javahelp2 which isn't installed dpkg: warning: ignoring request to remove junit4 which isn't installed dpkg: warning: ignoring request to remove libactivation-java which isn't installed dpkg: warning: ignoring request to remove libandroid-json-org-java which isn't installed dpkg: warning: ignoring request to remove libantlr-java which isn't installed dpkg: warning: ignoring request to remove libantlr4-runtime-java which isn't installed dpkg: warning: ignoring request to remove libaopalliance-java which isn't installed dpkg: warning: ignoring request to remove libapache-mime4j-java which isn't installed dpkg: warning: ignoring request to remove libapache-pom-java which isn't installed dpkg: warning: ignoring request to remove libapfloat-java which isn't installed dpkg: warning: ignoring request to remove libapparmor1 which isn't installed dpkg: warning: ignoring request to remove libargs4j-java which isn't installed dpkg: warning: ignoring request to remove libasm-java which isn't installed dpkg: warning: ignoring request to remove libasound2-data which isn't installed dpkg: warning: ignoring request to remove libasound2t64 which isn't installed dpkg: warning: ignoring request to remove libatinject-jsr330-api-java which isn't installed dpkg: warning: ignoring request to remove libatk-bridge2.0-0t64 which isn't installed dpkg: warning: ignoring request to remove libatk1.0-0t64 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libatspi2.0-0t64 which isn't installed dpkg: warning: ignoring request to remove libavahi-client3 which isn't installed dpkg: warning: ignoring request to remove libavahi-common-data which isn't installed dpkg: warning: ignoring request to remove libavahi-common3 which isn't installed dpkg: warning: ignoring request to remove libaxis-java which isn't installed dpkg: warning: ignoring request to remove libbiojava6-java which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsf-java which isn't installed dpkg: warning: ignoring request to remove libcairo-gobject2 which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcastor-core-java which isn't installed dpkg: warning: ignoring request to remove libcastor-xml-java which isn't installed dpkg: warning: ignoring request to remove libcdi-api-java which isn't installed dpkg: warning: ignoring request to remove libciftools-java which isn't installed dpkg: warning: ignoring request to remove libcloudproviders0 which isn't installed dpkg: warning: ignoring request to remove libcodemodel-java which isn't installed dpkg: warning: ignoring request to remove libcolord2 which isn't installed dpkg: warning: ignoring request to remove libcommons-cli-java which isn't installed dpkg: warning: ignoring request to remove libcommons-codec-java which isn't installed dpkg: warning: ignoring request to remove libcommons-compress-java which isn't installed dpkg: warning: ignoring request to remove libcommons-discovery-java which isn't installed dpkg: warning: ignoring request to remove libcommons-exec-java which isn't installed dpkg: warning: ignoring request to remove libcommons-httpclient-java which isn't installed dpkg: warning: ignoring request to remove libcommons-io-java which isn't installed dpkg: warning: ignoring request to remove libcommons-jexl2-java which isn't installed dpkg: warning: ignoring request to remove libcommons-lang-java which isn't installed dpkg: warning: ignoring request to remove libcommons-lang3-java which isn't installed dpkg: warning: ignoring request to remove libcommons-logging-java which isn't installed dpkg: warning: ignoring request to remove libcommons-math-java which isn't installed dpkg: warning: ignoring request to remove libcommons-math3-java which isn't installed dpkg: warning: ignoring request to remove libcommons-parent-java which isn't installed dpkg: warning: ignoring request to remove libcommons-text-java which isn't installed dpkg: warning: ignoring request to remove libcups2t64 which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libdbus-1-3 which isn't installed dpkg: warning: ignoring request to remove libdconf1 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libdom4j-java which isn't installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which isn't installed dpkg: warning: ignoring request to remove libdrm-common which isn't installed dpkg: warning: ignoring request to remove libdrm-intel1 which isn't installed dpkg: warning: ignoring request to remove libdrm-nouveau2 which isn't installed dpkg: warning: ignoring request to remove libdrm-radeon1 which isn't installed dpkg: warning: ignoring request to remove libdrm2 which isn't installed dpkg: warning: ignoring request to remove libdtd-parser-java which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libel-api-java which isn't installed dpkg: warning: ignoring request to remove libelf1t64 which isn't installed dpkg: warning: ignoring request to remove libepoxy0 which isn't installed dpkg: warning: ignoring request to remove liberror-prone-java which isn't installed dpkg: warning: ignoring request to remove libexec-maven-plugin-java which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfastinfoset-java which isn't installed dpkg: warning: ignoring request to remove libfastutil-java which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libgbm1 which isn't installed Purging configuration files for libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ... dpkg: warning: ignoring request to remove libgdk-pixbuf2.0-common which isn't installed dpkg: warning: ignoring request to remove libgeronimo-annotation-1.3-spec-java which isn't installed dpkg: warning: ignoring request to remove libgeronimo-interceptor-3.0-spec-java which isn't installed dpkg: warning: ignoring request to remove libgif7 which isn't installed dpkg: warning: ignoring request to remove libgl1 which isn't installed Purging configuration files for libgl1-mesa-dri:amd64 (24.2.4-1) ... dpkg: warning: ignoring request to remove libglapi-mesa which isn't installed Purging configuration files for libglib2.0-0t64:amd64 (2.82.1-1) ... dpkg: warning: ignoring request to remove libglvnd0 which isn't installed dpkg: warning: ignoring request to remove libglx-mesa0 which isn't installed dpkg: warning: ignoring request to remove libglx0 which isn't installed dpkg: warning: ignoring request to remove libgmbal-commons-java which isn't installed dpkg: warning: ignoring request to remove libgmbal-java which isn't installed dpkg: warning: ignoring request to remove libgmbal-pfl-java which isn't installed dpkg: warning: ignoring request to remove libgoogle-gson-java which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.21.3-3) ... Purging configuration files for libgtk-3-0t64:amd64 (3.24.43-4) ... Purging configuration files for libgtk-3-common (3.24.43-4) ... Purging configuration files for libgtk2.0-0t64:amd64 (2.24.33-6) ... Purging configuration files for libgtk2.0-common (2.24.33-6) ... dpkg: warning: ignoring request to remove libguava-java which isn't installed dpkg: warning: ignoring request to remove libguice-java which isn't installed dpkg: warning: ignoring request to remove libhamcrest-java which isn't installed dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libhawtjni-runtime-java which isn't installed dpkg: warning: ignoring request to remove libhtsjdk-java which isn't installed dpkg: warning: ignoring request to remove libhttpclient-java which isn't installed dpkg: warning: ignoring request to remove libhttpcore-java which isn't installed dpkg: warning: ignoring request to remove libhttpmime-java which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libinchi1 which isn't installed dpkg: warning: ignoring request to remove libinchi1.07 which isn't installed dpkg: warning: ignoring request to remove libintervalstorej-java which isn't installed dpkg: warning: ignoring request to remove libisorelax-java which isn't installed dpkg: warning: ignoring request to remove libistack-commons-java which isn't installed dpkg: warning: ignoring request to remove libitext5-java which isn't installed dpkg: warning: ignoring request to remove libjaba-client-java which isn't installed dpkg: warning: ignoring request to remove libjackson2-annotations-java which isn't installed dpkg: warning: ignoring request to remove libjackson2-core-java which isn't installed dpkg: warning: ignoring request to remove libjackson2-databind-java which isn't installed dpkg: warning: ignoring request to remove libjansi-java which isn't installed dpkg: warning: ignoring request to remove libjansi-native-java which isn't installed dpkg: warning: ignoring request to remove libjansi1-java which isn't installed dpkg: warning: ignoring request to remove libjaxb-api-java which isn't installed dpkg: warning: ignoring request to remove libjaxb-java which isn't installed dpkg: warning: ignoring request to remove libjaxen-java which isn't installed dpkg: warning: ignoring request to remove libjaxrs-api-java which isn't installed dpkg: warning: ignoring request to remove libjaxws-api-java which isn't installed dpkg: warning: ignoring request to remove libjaxws-java which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjersey1-client-java which isn't installed dpkg: warning: ignoring request to remove libjersey1-core-java which isn't installed dpkg: warning: ignoring request to remove libjetty9-java which isn't installed dpkg: warning: ignoring request to remove libjfreesvg-java which isn't installed dpkg: warning: ignoring request to remove libjgrapht-java which isn't installed dpkg: warning: ignoring request to remove libjgraphx-java which isn't installed dpkg: warning: ignoring request to remove libjheaps-java which isn't installed dpkg: warning: ignoring request to remove libjline2-java which isn't installed dpkg: warning: ignoring request to remove libjmol-java which isn't installed dpkg: warning: ignoring request to remove libjni-inchi-java which isn't installed dpkg: warning: ignoring request to remove libjni-inchi-jni which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjson-simple-java which isn't installed dpkg: warning: ignoring request to remove libjsoup-java which isn't installed dpkg: warning: ignoring request to remove libjsp-api-java which isn't installed dpkg: warning: ignoring request to remove libjsr305-java which isn't installed dpkg: warning: ignoring request to remove libjsr311-api-java which isn't installed dpkg: warning: ignoring request to remove libjswingreader-java which isn't installed dpkg: warning: ignoring request to remove libjws-api-java which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libknopflerfish-osgi-framework-java which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblcms2-2 which isn't installed dpkg: warning: ignoring request to remove liblerc4 which isn't installed dpkg: warning: ignoring request to remove liblightcouch-java which isn't installed dpkg: warning: ignoring request to remove libllvm15 which isn't installed dpkg: warning: ignoring request to remove libllvm18 which isn't installed dpkg: warning: ignoring request to remove libllvm19 which isn't installed dpkg: warning: ignoring request to remove liblog4j1.2-java which isn't installed dpkg: warning: ignoring request to remove liblog4j2-java which isn't installed dpkg: warning: ignoring request to remove libmail-java which isn't installed dpkg: warning: ignoring request to remove libmaven-archiver-java which isn't installed dpkg: warning: ignoring request to remove libmaven-compiler-plugin-java which isn't installed dpkg: warning: ignoring request to remove libmaven-file-management-java which isn't installed dpkg: warning: ignoring request to remove libmaven-jar-plugin-java which isn't installed dpkg: warning: ignoring request to remove libmaven-parent-java which isn't installed dpkg: warning: ignoring request to remove libmaven-resolver-java which isn't installed dpkg: warning: ignoring request to remove libmaven-shared-incremental-java which isn't installed dpkg: warning: ignoring request to remove libmaven-shared-io-java which isn't installed dpkg: warning: ignoring request to remove libmaven-shared-utils-java which isn't installed dpkg: warning: ignoring request to remove libmaven3-core-java which isn't installed dpkg: warning: ignoring request to remove libmbedcrypto7t64 which isn't installed dpkg: warning: ignoring request to remove libmbedtls14t64 which isn't installed dpkg: warning: ignoring request to remove libmbedx509-1t64 which isn't installed dpkg: warning: ignoring request to remove libmetro-policy-java which isn't installed dpkg: warning: ignoring request to remove libmiglayout-java which isn't installed dpkg: warning: ignoring request to remove libmimepull-java which isn't installed dpkg: warning: ignoring request to remove libmjson-java which isn't installed dpkg: warning: ignoring request to remove libmmtf-java which isn't installed dpkg: warning: ignoring request to remove libmongodb-java which isn't installed dpkg: warning: ignoring request to remove libmsgpack-java which isn't installed dpkg: warning: ignoring request to remove libmsv-java which isn't installed dpkg: warning: ignoring request to remove libnaga-java which isn't installed dpkg: warning: ignoring request to remove libncbi-ngs3 which isn't installed dpkg: warning: ignoring request to remove libncbi-vdb3 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libngs-java which isn't installed dpkg: warning: ignoring request to remove libngs-jni which isn't installed dpkg: warning: ignoring request to remove libnspr4 which isn't installed dpkg: warning: ignoring request to remove libnss3 which isn't installed dpkg: warning: ignoring request to remove libpam-systemd which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libpcsclite1 which isn't installed dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libplexus-archiver-java which isn't installed dpkg: warning: ignoring request to remove libplexus-cipher-java which isn't installed dpkg: warning: ignoring request to remove libplexus-classworlds-java which isn't installed dpkg: warning: ignoring request to remove libplexus-compiler-java which isn't installed dpkg: warning: ignoring request to remove libplexus-component-annotations-java which isn't installed dpkg: warning: ignoring request to remove libplexus-container-default-java which isn't installed dpkg: warning: ignoring request to remove libplexus-interpolation-java which isn't installed dpkg: warning: ignoring request to remove libplexus-io-java which isn't installed dpkg: warning: ignoring request to remove libplexus-languages-java which isn't installed dpkg: warning: ignoring request to remove libplexus-sec-dispatcher-java which isn't installed dpkg: warning: ignoring request to remove libplexus-utils2-java which isn't installed dpkg: warning: ignoring request to remove libpng16-16t64 which isn't installed dpkg: warning: ignoring request to remove libproc2-0 which isn't installed dpkg: warning: ignoring request to remove libqdox-java which isn't installed dpkg: warning: ignoring request to remove libqdox2-java which isn't installed dpkg: warning: ignoring request to remove librelaxng-datatype-java which isn't installed dpkg: warning: ignoring request to remove librhino-java which isn't installed dpkg: warning: ignoring request to remove librngom-java which isn't installed dpkg: warning: ignoring request to remove libsaaj-java which isn't installed dpkg: warning: ignoring request to remove libsaaj-ri-java which isn't installed Purging configuration files for libsensors-config (1:3.6.0-10) ... dpkg: warning: ignoring request to remove libsensors5 which isn't installed dpkg: warning: ignoring request to remove libservlet-api-java which isn't installed dpkg: warning: ignoring request to remove libsharpyuv0 which isn't installed dpkg: warning: ignoring request to remove libsisu-inject-java which isn't installed dpkg: warning: ignoring request to remove libsisu-plexus-java which isn't installed dpkg: warning: ignoring request to remove libslf4j-java which isn't installed dpkg: warning: ignoring request to remove libsnappy-java which isn't installed dpkg: warning: ignoring request to remove libsnappy-jni which isn't installed dpkg: warning: ignoring request to remove libsnappy1v5 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libstax-ex-java which isn't installed dpkg: warning: ignoring request to remove libstax2-api-java which isn't installed dpkg: warning: ignoring request to remove libstreambuffer-java which isn't installed dpkg: warning: ignoring request to remove libsystemd-shared which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtiff6 which isn't installed dpkg: warning: ignoring request to remove libtxw2-java which isn't installed dpkg: warning: ignoring request to remove libvamsas-client-java which isn't installed dpkg: warning: ignoring request to remove libvecmath-java which isn't installed dpkg: warning: ignoring request to remove libvulkan1 which isn't installed dpkg: warning: ignoring request to remove libwagon-http-java which isn't installed dpkg: warning: ignoring request to remove libwagon-provider-api-java which isn't installed dpkg: warning: ignoring request to remove libwayland-client0 which isn't installed dpkg: warning: ignoring request to remove libwayland-cursor0 which isn't installed dpkg: warning: ignoring request to remove libwayland-egl1 which isn't installed dpkg: warning: ignoring request to remove libwayland-server0 which isn't installed dpkg: warning: ignoring request to remove libwebp7 which isn't installed dpkg: warning: ignoring request to remove libwebsocket-api-java which isn't installed dpkg: warning: ignoring request to remove libwoodstox-java which isn't installed dpkg: warning: ignoring request to remove libwsdl4j-java which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libx11-xcb1 which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxbean-reflect-java which isn't installed dpkg: warning: ignoring request to remove libxcb-dri2-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri3-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-glx0 which isn't installed dpkg: warning: ignoring request to remove libxcb-present0 which isn't installed dpkg: warning: ignoring request to remove libxcb-randr0 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb-sync1 which isn't installed dpkg: warning: ignoring request to remove libxcb-xfixes0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxcomposite1 which isn't installed dpkg: warning: ignoring request to remove libxcursor1 which isn't installed dpkg: warning: ignoring request to remove libxdamage1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxerces2-java which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxfixes3 which isn't installed dpkg: warning: ignoring request to remove libxi6 which isn't installed dpkg: warning: ignoring request to remove libxinerama1 which isn't installed dpkg: warning: ignoring request to remove libxkbcommon0 which isn't installed dpkg: warning: ignoring request to remove libxml-commons-external-java which isn't installed Purging configuration files for libxml-commons-resolver1.1-java (1.2-11) ... dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxpp3-java which isn't installed dpkg: warning: ignoring request to remove libxrandr2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxshmfence1 which isn't installed dpkg: warning: ignoring request to remove libxsom-java which isn't installed dpkg: warning: ignoring request to remove libxstream-java which isn't installed dpkg: warning: ignoring request to remove libxtst6 which isn't installed dpkg: warning: ignoring request to remove libxxf86vm1 which isn't installed dpkg: warning: ignoring request to remove libxz-java which isn't installed dpkg: warning: ignoring request to remove libz3-4 which isn't installed dpkg: warning: ignoring request to remove mesa-libgallium which isn't installed dpkg: warning: ignoring request to remove ncbi-vdb-data which isn't installed dpkg: warning: ignoring request to remove openjdk-17-jre which isn't installed Purging configuration files for openjdk-17-jre-headless:amd64 (17.0.13~6ea-1) ... dpkg: warning: ignoring request to remove openjdk-21-jre which isn't installed Purging configuration files for openjdk-21-jre-headless:amd64 (21.0.5~8ea-1) ... Purging configuration files for openssl (3.3.2-1) ... Purging configuration files for procps (2:4.0.4-6) ... Purging configuration files for shared-mime-info (2.4-5+b1) ... Purging configuration files for systemd (256.6-1) ... dpkg: warning: ignoring request to remove systemd-sysv which isn't installed dpkg: warning: ignoring request to remove varna which isn't installed Purging configuration files for x11-common (1:7.7+23.1) ... dpkg: warning: while removing x11-common, directory '/etc/init.d' not empty so not removed dpkg: warning: ignoring request to remove xkb-data which isn't installed 1m12.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg', '--purge', 'adwaita-icon-theme', 'ant', 'ant-optional', 'antlr', 'at-spi2-common', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'groovy', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'ivy', 'java-common', 'javahelp2', 'junit4', 'libactivation-java', 'libandroid-json-org-java', 'libantlr-java', 'libantlr4-runtime-java', 'libaopalliance-java', 'libapache-mime4j-java', 'libapache-pom-java', 'libapfloat-java', 'libapparmor1:amd64', 'libargs4j-java', 'libasm-java', 'libasound2-data', 'libasound2t64:amd64', 'libatinject-jsr330-api-java', 'libatk-bridge2.0-0t64:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libaxis-java', 'libbiojava6-java', 'libbrotli1:amd64', 'libbsf-java', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcastor-core-java', 'libcastor-xml-java', 'libcdi-api-java', 'libciftools-java', 'libcloudproviders0:amd64', 'libcodemodel-java', 'libcolord2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-compress-java', 'libcommons-discovery-java', 'libcommons-exec-java', 'libcommons-httpclient-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-math-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libcommons-text-java', 'libcups2t64:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdeflate0:amd64', 'libdom4j-java', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdtd-parser-java', 'libedit2:amd64', 'libel-api-java', 'libelf1t64:amd64', 'libepoxy0:amd64', 'liberror-prone-java', 'libexec-maven-plugin-java', 'libexpat1:amd64', 'libfastinfoset-java', 'libfastutil-java', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgbm1:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgeronimo-annotation-1.3-spec-java', 'libgeronimo-interceptor-3.0-spec-java', 'libgif7:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglib2.0-0t64:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgmbal-commons-java', 'libgmbal-java', 'libgmbal-pfl-java', 'libgoogle-gson-java', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-common', 'libgtk2.0-0:amd64', 'libgtk2.0-0t64:amd64', 'libgtk2.0-common', 'libguava-java', 'libguice-java', 'libhamcrest-java', 'libharfbuzz0b:amd64', 'libhawtjni-runtime-java', 'libhtsjdk-java', 'libhttpclient-java', 'libhttpcore-java', 'libhttpmime-java', 'libicu72:amd64', 'libinchi1', 'libinchi1.07', 'libintervalstorej-java', 'libisorelax-java', 'libistack-commons-java', 'libitext5-java', 'libjaba-client-java', 'libjackson2-annotations-java', 'libjackson2-core-java', 'libjackson2-databind-java', 'libjansi-java', 'libjansi-native-java', 'libjansi1-java', 'libjaxb-api-java', 'libjaxb-java', 'libjaxen-java', 'libjaxrs-api-java', 'libjaxws-api-java', 'libjaxws-java', 'libjbig0:amd64', 'libjersey1-client-java', 'libjersey1-core-java', 'libjetty9-java', 'libjfreesvg-java', 'libjgrapht-java', 'libjgraphx-java', 'libjheaps-java', 'libjline2-java', 'libjmol-java', 'libjni-inchi-java', 'libjni-inchi-jni', 'libjpeg62-turbo:amd64', 'libjson-simple-java', 'libjsoup-java', 'libjsp-api-java', 'libjsr305-java', 'libjsr311-api-java', 'libjswingreader-java', 'libjws-api-java', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libknopflerfish-osgi-framework-java', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblcms2-2:amd64', 'liblerc4:amd64', 'liblightcouch-java', 'libllvm15:amd64', 'libllvm18:amd64', 'libllvm19:amd64', 'liblog4j1.2-java', 'liblog4j2-java', 'libmail-java', 'libmaven-archiver-java', 'libmaven-compiler-plugin-java', 'libmaven-file-management-java', 'libmaven-jar-plugin-java', 'libmaven-parent-java', 'libmaven-resolver-java', 'libmaven-shared-incremental-java', 'libmaven-shared-io-java', 'libmaven-shared-utils-java', 'libmaven3-core-java', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmetro-policy-java', 'libmiglayout-java', 'libmimepull-java', 'libmjson-java', 'libmmtf-java', 'libmongodb-java', 'libmsgpack-java', 'libmsv-java', 'libnaga-java', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncursesw6:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libpixman-1-0:amd64', 'libplexus-archiver-java', 'libplexus-cipher-java', 'libplexus-classworlds-java', 'libplexus-compiler-java', 'libplexus-component-annotations-java', 'libplexus-container-default-java', 'libplexus-interpolation-java', 'libplexus-io-java', 'libplexus-languages-java', 'libplexus-sec-dispatcher-java', 'libplexus-utils2-java', 'libpng16-16t64:amd64', 'libproc2-0:amd64', 'libqdox-java', 'libqdox2-java', 'librelaxng-datatype-java', 'librhino-java', 'librngom-java', 'libsaaj-java', 'libsaaj-ri-java', 'libsensors-config', 'libsensors5:amd64', 'libservlet-api-java', 'libsharpyuv0:amd64', 'libsisu-inject-java', 'libsisu-plexus-java', 'libslf4j-java', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libstax-ex-java', 'libstax2-api-java', 'libstreambuffer-java', 'libsystemd-shared:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtxw2-java', 'libvamsas-client-java', 'libvecmath-java', 'libvulkan1:amd64', 'libwagon-http-java', 'libwagon-provider-api-java', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebsocket-api-java', 'libwoodstox-java', 'libwsdl4j-java', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxbean-reflect-java', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2:amd64', 'libxpp3-java', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxsom-java', 'libxstream-java', 'libxtst6:amd64', 'libxxf86vm1:amd64', 'libxz-java', 'libz3-4:amd64', 'mesa-libgallium:amd64', 'ncbi-vdb-data', 'openjdk-17-jre:amd64', 'openjdk-17-jre-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openssl', 'procps', 'shared-mime-info', 'systemd', 'systemd-sysv', 'varna', 'x11-common', 'xkb-data'] 1m12.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg', '--purge', 'jalview'] 1m12.7s DUMP: (Reading database ... 5286 files and directories currently installed.) Purging configuration files for jalview (2.11.4.0+dfsg-3) ... 1m12.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg', '--purge', 'jalview'] 1m12.7s INFO: Running scripts post_purge 1m12.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_purge_exceptions'] 1m12.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_purge_exceptions'] 1m12.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg', '--purge', '--pending'] 1m12.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg', '--purge', '--pending'] 1m12.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg', '--remove', '--pending'] 1m12.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg', '--remove', '--pending'] 1m12.7s INFO: Running scripts post_test 1m12.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_test_exceptions'] 1m12.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'tmp/scripts/post_test_exceptions'] 1m12.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m13.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg-divert', '--list'] 1m13.0s DUMP: diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra 1m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'dpkg-divert', '--list'] 1m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'clean'] 1m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0', 'apt-get', 'clean'] 1m13.1s DEBUG: Recording chroot state 1m13.4s INFO: Warning: Package purging left files on system: /etc/default/locale -> ../locale.conf not owned /etc/fonts/ owned by: fontconfig-config, fonts-dejavu-mono, fonts-dejavu-core /etc/fonts/conf.d/ owned by: fontconfig-config, fonts-dejavu-mono, fonts-dejavu-core /etc/fonts/conf.d/70-no-bitmaps-except-emoji.conf -> /usr/share/fontconfig/conf.avail/70-no-bitmaps-except-emoji.conf not owned /etc/vconsole.conf -> default/keyboard not owned /root/.ssh/ not owned /var/cache/private/ not owned /var/lib/private/ not owned /var/lib/systemd/coredump/ not owned /var/lib/systemd/ephemeral-trees/ not owned /var/lib/systemd/network/ not owned /var/lib/systemd/pstore/ not owned /var/log/private/ not owned 1m13.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/shm'] 1m13.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/shm'] 1m13.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/console'] 1m13.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/console'] 1m13.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/ptmx'] 1m13.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/ptmx'] 1m13.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/pts'] 1m13.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/dev/pts'] 1m13.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/proc'] 1m13.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0/proc'] 1m13.7s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m13.8s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpnyhxg0b0'] 1m13.8s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpnyhxg0b0 1m13.8s INFO: PASS: Upgrading between Debian distributions. 1m13.8s INFO: PASS: All tests. 1m13.8s INFO: piuparts run ends. ret=0 End: 2024-10-06 16:32:37 GMT