Start: 2020-12-12 19:57:27 GMT [stable] Package: r-bioc-mergeomics Version: 1.10.0-1 Installed-Size: 8797 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 3.5.1-1), r-api-3.5 Recommends: r-cran-runit, r-bioc-biocgenerics Description: Integrative network analysis of omics data Homepage: https://bioconductor.org/packages/Mergeomics/ Description-md5: d744e3c22ea2ecce9f31fb5a290ad6a6 Section: gnu-r Priority: optional Filename: pool/main/r/r-bioc-mergeomics/r-bioc-mergeomics_1.10.0-1_all.deb Size: 2723292 MD5sum: 412ab5cf638a82e7e43e7259b4815bf9 SHA256: cc20fa8a8201f87e2379c265bfa5e30d93c4efe28a71c74fb9e770141960cc4f [testing] Package: r-bioc-mergeomics Version: 1.18.0-1 Installed-Size: 8795 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12 Recommends: r-cran-runit, r-bioc-biocgenerics Description: Integrative network analysis of omics data Homepage: https://bioconductor.org/packages/Mergeomics/ Description-md5: d744e3c22ea2ecce9f31fb5a290ad6a6 Section: gnu-r Priority: optional Filename: pool/main/r/r-bioc-mergeomics/r-bioc-mergeomics_1.18.0-1_all.deb Size: 2725484 MD5sum: 2f542e52c4fab909bd91b47bdb93858e SHA256: 4b814987f809b8c37e96823bbfb65d9a53cd3ad1f03cf18db577a68b769f1ce5 [sid] Package: r-bioc-mergeomics Version: 1.18.0-1 Installed-Size: 8795 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12 Recommends: r-cran-runit, r-bioc-biocgenerics Description: Integrative network analysis of omics data Homepage: https://bioconductor.org/packages/Mergeomics/ Description-md5: d744e3c22ea2ecce9f31fb5a290ad6a6 Section: gnu-r Priority: optional Filename: pool/main/r/r-bioc-mergeomics/r-bioc-mergeomics_1.18.0-1_all.deb Size: 2725484 MD5sum: 2f542e52c4fab909bd91b47bdb93858e SHA256: 4b814987f809b8c37e96823bbfb65d9a53cd3ad1f03cf18db577a68b769f1ce5 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat --apt r-bioc-mergeomics=1.18.0-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.2~202004292056~1.1.1-20-gd7155993 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat --apt r-bioc-mergeomics=1.18.0-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.19.0-13-amd64 #1 SMP Debian 4.19.160-2 (2020-11-28) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpkv5lghox 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpkv5lghox 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz'] 0m1.7s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/buster_amd64.tar.gz'] 0m1.7s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/proc'] 0m1.7s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/proc'] 0m1.7s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/pts'] 0m1.7s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/pts'] 0m1.7s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/ptmx'] 0m1.7s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/ptmx'] 0m1.7s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/console'] 0m1.7s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/console'] 0m1.7s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/shm'] 0m1.7s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/shm'] 0m1.7s DEBUG: sources.list: deb http://deb.debian.org/debian/ buster main 0m1.7s DEBUG: Created policy-rc.d and chmodded it. 0m1.7s DEBUG: Created resolv.conf. 0m1.7s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpkv5lghox/tmp/scripts/ 0m1.8s INFO: Running scripts post_chroot_unpack 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'update'] 0m2.6s DUMP: Hit:1 http://deb.debian.org/debian buster InRelease Reading package lists... 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'update'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-yf', 'dist-upgrade'] 0m3.0s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-yf', 'dist-upgrade'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.3s DUMP: ce7a8b93bcb3e61f85f689b1ec74f21c - 0m3.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.3s INFO: Running scripts post_setup 0m3.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_dummy_users'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_dummy_users'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_forbid_home'] 0m4.1s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_forbid_home'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.1s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_minimize'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_minimize'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_zz_backports'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_setup_zz_backports'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.2s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 1.8.2.1 install ok installed base-files base-files 10.3+deb10u7 install ok installed base-passwd base-passwd 3.5.46 install ok installed bash bash 5.0-4 install ok installed bsdutils bsdutils 1:2.33.1-0.1 install ok installed coreutils coreutils 8.30-3 install ok installed dash dash 0.5.10.2-5 install ok installed debconf debconf 1.5.71 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.8.6.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.7 install ok installed e2fsprogs e2fsprogs 1.44.5-1+deb10u3 install ok installed fdisk fdisk 2.33.1-0.1 install ok installed findutils findutils 4.6.0+git+20190209-2 install ok installed gcc-8-base:amd64 gcc-8-base 8.3.0-6 install ok installed gpgv gpgv 2.2.12-1+deb10u1 install ok installed grep grep 3.3-1 install ok installed gzip gzip 1.9-3 install ok installed hostname hostname 3.21 install ok installed init-system-helpers init-system-helpers 1.56+nmu1 install ok installed libacl1:amd64 libacl1 2.2.53-4 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.1 install ok installed libattr1:amd64 libattr1 1:2.4.48-4 install ok installed libaudit-common libaudit-common 1:2.8.4-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.4-3 install ok installed libblkid1:amd64 libblkid1 2.33.1-0.1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u1 install ok installed libc-bin libc-bin 2.28-10 install ok installed libc6:amd64 libc6 2.28-10 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u5 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u2 install ok installed libnettle6:amd64 libnettle6 3.4.1-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u5 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u2 install ok installed libudev1:amd64 libudev1 241-7~deb10u5 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3 install ok installed login login 1:4.5-1.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.33.1-0.1 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u2 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u2 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed tzdata tzdata 2020d-0+deb10u1 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.2s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat 0m4.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m4.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m4.5s INFO: Running scripts is_testable 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/is_testable_uninstallable'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/is_testable_uninstallable'] 0m4.5s INFO: Running scripts pre_test 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_test_exceptions'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_test_exceptions'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_test_root_password'] 0m4.5s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_test_root_password'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'show', '--no-all-versions', 'r-bioc-mergeomics'] 0m4.7s DUMP: Package: r-bioc-mergeomics Version: 1.10.0-1 Installed-Size: 8797 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 3.5.1-1), r-api-3.5 Recommends: r-cran-runit, r-bioc-biocgenerics Description-en: Integrative network analysis of omics data The Mergeomics pipeline serves as a flexible framework for integrating multidimensional omics-disease associations, functional genomics, canonical pathways and gene-gene interaction networks to generate mechanistic hypotheses. It includes two main parts: 1) Marker set enrichment analysis (MSEA); 2) Weighted Key Driver Analysis (wKDA). Description-md5: d744e3c22ea2ecce9f31fb5a290ad6a6 Homepage: https://bioconductor.org/packages/Mergeomics/ Section: gnu-r Priority: optional Filename: pool/main/r/r-bioc-mergeomics/r-bioc-mergeomics_1.10.0-1_all.deb Size: 2723292 MD5sum: 412ab5cf638a82e7e43e7259b4815bf9 SHA256: cc20fa8a8201f87e2379c265bfa5e30d93c4efe28a71c74fb9e770141960cc4f 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'show', '--no-all-versions', 'r-bioc-mergeomics'] 0m4.7s INFO: apt-cache knows about the following packages: r-bioc-mergeomics 0m4.7s INFO: Running scripts pre_install 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_database-server'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_database-server'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_exceptions'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_exceptions'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_extras'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_extras'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy'] 0m4.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian buster/main amd64 Packages release v=10.7,o=Debian,a=stable,n=buster,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy', 'r-bioc-mergeomics'] 0m4.8s DUMP: r-bioc-mergeomics: Installed: (none) Candidate: 1.10.0-1 Version table: 1.10.0-1 500 500 http://deb.debian.org/debian buster/main amd64 Packages 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy', 'r-bioc-mergeomics'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-y', 'install', 'r-bioc-mergeomics'] 0m18.0s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: ca-certificates fontconfig fontconfig-config fonts-dejavu-core libblas3 libbsd0 libcairo2 libcurl4 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu63 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.4-2 libldap-common libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 libreadline7 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libssh2-1 libssl1.1 libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1 libxss1 libxt6 lsb-base openssl r-base-core readline-common sensible-utils ucf unzip x11-common xdg-utils zip Suggested packages: krb5-doc krb5-user tcl8.6 tk8.6 ess r-doc-info | r-doc-pdf r-mathlib r-base-html readline-doc Recommended packages: libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales publicsuffix libsasl2-modules r-recommended r-base-dev r-doc-html r-cran-runit r-bioc-biocgenerics libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: ca-certificates fontconfig fontconfig-config fonts-dejavu-core libblas3 libbsd0 libcairo2 libcurl4 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu63 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.4-2 libldap-common libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 libreadline7 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libssh2-1 libssl1.1 libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1 libxss1 libxt6 lsb-base openssl r-base-core r-bioc-mergeomics readline-common sensible-utils ucf unzip x11-common xdg-utils zip 0 upgraded, 76 newly installed, 0 to remove and 0 not upgraded. Need to get 55.3 MB of archives. After this operation, 134 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian buster/main amd64 readline-common all 7.0-5 [70.6 kB] Get:2 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:3 http://deb.debian.org/debian buster/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:4 http://deb.debian.org/debian buster/main amd64 libssl1.1 amd64 1.1.1d-0+deb10u3 [1538 kB] Get:5 http://deb.debian.org/debian buster/main amd64 openssl amd64 1.1.1d-0+deb10u3 [844 kB] Get:6 http://deb.debian.org/debian buster/main amd64 ca-certificates all 20190110 [157 kB] Get:7 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u1 [106 kB] Get:8 http://deb.debian.org/debian buster/main amd64 libpng16-16 amd64 1.6.36-6 [292 kB] Get:9 http://deb.debian.org/debian buster/main amd64 libfreetype6 amd64 2.9.1-3+deb10u2 [380 kB] Get:10 http://deb.debian.org/debian buster/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:11 http://deb.debian.org/debian buster/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get:12 http://deb.debian.org/debian buster/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB] Get:13 http://deb.debian.org/debian buster/main amd64 fontconfig amd64 2.13.1-2 [405 kB] Get:14 http://deb.debian.org/debian buster/main amd64 libquadmath0 amd64 8.3.0-6 [133 kB] Get:15 http://deb.debian.org/debian buster/main amd64 libgfortran5 amd64 8.3.0-6 [581 kB] Get:16 http://deb.debian.org/debian buster/main amd64 libblas3 amd64 3.8.0-2 [148 kB] Get:17 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:18 http://deb.debian.org/debian buster/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get:19 http://deb.debian.org/debian buster/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:20 http://deb.debian.org/debian buster/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:21 http://deb.debian.org/debian buster/main amd64 libxcb1 amd64 1.13.1-2 [137 kB] Get:22 http://deb.debian.org/debian buster/main amd64 libx11-data all 2:1.6.7-1+deb10u1 [294 kB] Get:23 http://deb.debian.org/debian buster/main amd64 libx11-6 amd64 2:1.6.7-1+deb10u1 [757 kB] Get:24 http://deb.debian.org/debian buster/main amd64 libxcb-render0 amd64 1.13.1-2 [109 kB] Get:25 http://deb.debian.org/debian buster/main amd64 libxcb-shm0 amd64 1.13.1-2 [99.2 kB] Get:26 http://deb.debian.org/debian buster/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:27 http://deb.debian.org/debian buster/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:28 http://deb.debian.org/debian buster/main amd64 libcairo2 amd64 1.16.0-4 [689 kB] Get:29 http://deb.debian.org/debian buster/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:30 http://deb.debian.org/debian buster/main amd64 libkrb5support0 amd64 1.17-3+deb10u1 [65.8 kB] Get:31 http://deb.debian.org/debian buster/main amd64 libk5crypto3 amd64 1.17-3+deb10u1 [122 kB] Get:32 http://deb.debian.org/debian buster/main amd64 libkrb5-3 amd64 1.17-3+deb10u1 [369 kB] Get:33 http://deb.debian.org/debian buster/main amd64 libgssapi-krb5-2 amd64 1.17-3+deb10u1 [158 kB] Get:34 http://deb.debian.org/debian buster/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1+deb10u1 [69.1 kB] Get:35 http://deb.debian.org/debian buster/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1+deb10u1 [106 kB] Get:36 http://deb.debian.org/debian buster/main amd64 libldap-common all 2.4.47+dfsg-3+deb10u4 [89.8 kB] Get:37 http://deb.debian.org/debian buster/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-3+deb10u4 [224 kB] Get:38 http://deb.debian.org/debian buster/main amd64 libnghttp2-14 amd64 1.36.0-2+deb10u1 [85.0 kB] Get:39 http://deb.debian.org/debian buster/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get:40 http://deb.debian.org/debian buster/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2 [60.5 kB] Get:41 http://deb.debian.org/debian buster/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:42 http://deb.debian.org/debian buster/main amd64 libcurl4 amd64 7.64.0-4+deb10u1 [331 kB] Get:43 http://deb.debian.org/debian buster/main amd64 libdatrie1 amd64 0.2.12-2 [39.3 kB] Get:44 http://deb.debian.org/debian buster/main amd64 libfribidi0 amd64 1.0.5-3.1+deb10u1 [63.7 kB] Get:45 http://deb.debian.org/debian buster/main amd64 libglib2.0-0 amd64 2.58.3-2+deb10u2 [1258 kB] Get:46 http://deb.debian.org/debian buster/main amd64 libgomp1 amd64 8.3.0-6 [75.8 kB] Get:47 http://deb.debian.org/debian buster/main amd64 libgraphite2-3 amd64 1.3.13-7 [80.7 kB] Get:48 http://deb.debian.org/debian buster/main amd64 libharfbuzz0b amd64 2.3.1-1 [1187 kB] Get:49 http://deb.debian.org/debian buster/main amd64 lsb-base all 10.2019051400 [28.4 kB] Get:50 http://deb.debian.org/debian buster/main amd64 x11-common all 1:7.7+19 [251 kB] Get:51 http://deb.debian.org/debian buster/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:52 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u1 [8300 kB] Get:53 http://deb.debian.org/debian buster/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:54 http://deb.debian.org/debian buster/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+deb10u1 [133 kB] Get:55 http://deb.debian.org/debian buster/main amd64 liblapack3 amd64 3.8.0-2 [2110 kB] Get:56 http://deb.debian.org/debian buster/main amd64 libthai-data all 0.1.28-2 [170 kB] Get:57 http://deb.debian.org/debian buster/main amd64 libthai0 amd64 0.1.28-2 [54.1 kB] Get:58 http://deb.debian.org/debian buster/main amd64 libpango-1.0-0 amd64 1.42.4-8~deb10u1 [186 kB] Get:59 http://deb.debian.org/debian buster/main amd64 libpangoft2-1.0-0 amd64 1.42.4-8~deb10u1 [68.3 kB] Get:60 http://deb.debian.org/debian buster/main amd64 libpangocairo-1.0-0 amd64 1.42.4-8~deb10u1 [55.7 kB] Get:61 http://deb.debian.org/debian buster/main amd64 libpaper1 amd64 1.1.28 [21.3 kB] Get:62 http://deb.debian.org/debian buster/main amd64 libpaper-utils amd64 1.1.28 [18.0 kB] Get:63 http://deb.debian.org/debian buster/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:64 http://deb.debian.org/debian buster/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:65 http://deb.debian.org/debian buster/main amd64 libtcl8.6 amd64 8.6.9+dfsg-2 [1005 kB] Get:66 http://deb.debian.org/debian buster/main amd64 libwebp6 amd64 0.6.1-2 [263 kB] Get:67 http://deb.debian.org/debian buster/main amd64 libtiff5 amd64 4.1.0+git191117-2~deb10u1 [271 kB] Get:68 http://deb.debian.org/debian buster/main amd64 libxft2 amd64 2.3.2-2 [57.2 kB] Get:69 http://deb.debian.org/debian buster/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get:70 http://deb.debian.org/debian buster/main amd64 libtk8.6 amd64 8.6.9-2 [768 kB] Get:71 http://deb.debian.org/debian buster/main amd64 libxt6 amd64 1:1.1.5-1+b3 [190 kB] Get:72 http://deb.debian.org/debian buster/main amd64 zip amd64 3.0-11+b1 [234 kB] Get:73 http://deb.debian.org/debian buster/main amd64 unzip amd64 6.0-23+deb10u1 [172 kB] Get:74 http://deb.debian.org/debian buster/main amd64 xdg-utils all 1.1.3-1+deb10u1 [73.7 kB] Get:75 http://deb.debian.org/debian buster/main amd64 r-base-core amd64 3.5.2-1 [23.9 MB] Get:76 http://deb.debian.org/debian buster/main amd64 r-bioc-mergeomics all 1.10.0-1 [2723 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 55.3 MB in 1s (39.5 MB/s) Selecting previously unselected package readline-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6462 files and directories currently installed.) Preparing to unpack .../00-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package ucf. Preparing to unpack .../02-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../03-libssl1.1_1.1.1d-0+deb10u3_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1d-0+deb10u3) ... Selecting previously unselected package openssl. Preparing to unpack .../04-openssl_1.1.1d-0+deb10u3_amd64.deb ... Unpacking openssl (1.1.1d-0+deb10u3) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../05-ca-certificates_20190110_all.deb ... Unpacking ca-certificates (20190110) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../06-libexpat1_2.2.6-2+deb10u1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.6-2+deb10u1) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../07-libpng16-16_1.6.36-6_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.36-6) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../08-libfreetype6_2.9.1-3+deb10u2_amd64.deb ... Unpacking libfreetype6:amd64 (2.9.1-3+deb10u2) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../09-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../10-fontconfig-config_2.13.1-2_all.deb ... Unpacking fontconfig-config (2.13.1-2) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../11-libfontconfig1_2.13.1-2_amd64.deb ... Unpacking libfontconfig1:amd64 (2.13.1-2) ... Selecting previously unselected package fontconfig. Preparing to unpack .../12-fontconfig_2.13.1-2_amd64.deb ... Unpacking fontconfig (2.13.1-2) ... Selecting previously unselected package libquadmath0:amd64. Preparing to unpack .../13-libquadmath0_8.3.0-6_amd64.deb ... Unpacking libquadmath0:amd64 (8.3.0-6) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../14-libgfortran5_8.3.0-6_amd64.deb ... Unpacking libgfortran5:amd64 (8.3.0-6) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../15-libblas3_3.8.0-2_amd64.deb ... Unpacking libblas3:amd64 (3.8.0-2) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../16-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../17-libpixman-1-0_0.36.0-1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.36.0-1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../18-libxau6_1%3a1.0.8-1+b2_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.8-1+b2) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../19-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../20-libxcb1_1.13.1-2_amd64.deb ... Unpacking libxcb1:amd64 (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../21-libx11-data_2%3a1.6.7-1+deb10u1_all.deb ... Unpacking libx11-data (2:1.6.7-1+deb10u1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../22-libx11-6_2%3a1.6.7-1+deb10u1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.6.7-1+deb10u1) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../23-libxcb-render0_1.13.1-2_amd64.deb ... Unpacking libxcb-render0:amd64 (1.13.1-2) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../24-libxcb-shm0_1.13.1-2_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.13.1-2) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../25-libxext6_2%3a1.3.3-1+b2_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.3-1+b2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../26-libxrender1_1%3a0.9.10-1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../27-libcairo2_1.16.0-4_amd64.deb ... Unpacking libcairo2:amd64 (1.16.0-4) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../28-libkeyutils1_1.6-6_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6-6) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../29-libkrb5support0_1.17-3+deb10u1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-3+deb10u1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../30-libk5crypto3_1.17-3+deb10u1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-3+deb10u1) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../31-libkrb5-3_1.17-3+deb10u1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-3+deb10u1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../32-libgssapi-krb5-2_1.17-3+deb10u1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-3+deb10u1) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../33-libsasl2-modules-db_2.1.27+dfsg-1+deb10u1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../34-libsasl2-2_2.1.27+dfsg-1+deb10u1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-1+deb10u1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../35-libldap-common_2.4.47+dfsg-3+deb10u4_all.deb ... Unpacking libldap-common (2.4.47+dfsg-3+deb10u4) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../36-libldap-2.4-2_2.4.47+dfsg-3+deb10u4_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.47+dfsg-3+deb10u4) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../37-libnghttp2-14_1.36.0-2+deb10u1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.36.0-2+deb10u1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../38-libpsl5_0.20.2-2_amd64.deb ... Unpacking libpsl5:amd64 (0.20.2-2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../39-librtmp1_2.4+20151223.gitfa8646d.1-2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../40-libssh2-1_1.8.0-2.1_amd64.deb ... Unpacking libssh2-1:amd64 (1.8.0-2.1) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../41-libcurl4_7.64.0-4+deb10u1_amd64.deb ... Unpacking libcurl4:amd64 (7.64.0-4+deb10u1) ... Selecting previously unselected package libdatrie1:amd64. Preparing to unpack .../42-libdatrie1_0.2.12-2_amd64.deb ... Unpacking libdatrie1:amd64 (0.2.12-2) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../43-libfribidi0_1.0.5-3.1+deb10u1_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.5-3.1+deb10u1) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../44-libglib2.0-0_2.58.3-2+deb10u2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-2+deb10u2) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../45-libgomp1_8.3.0-6_amd64.deb ... Unpacking libgomp1:amd64 (8.3.0-6) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../46-libgraphite2-3_1.3.13-7_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.13-7) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../47-libharfbuzz0b_2.3.1-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (2.3.1-1) ... Selecting previously unselected package lsb-base. Preparing to unpack .../48-lsb-base_10.2019051400_all.deb ... Unpacking lsb-base (10.2019051400) ... Selecting previously unselected package x11-common. Preparing to unpack .../49-x11-common_1%3a7.7+19_all.deb ... Unpacking x11-common (1:7.7+19) ... Selecting previously unselected package libice6:amd64. Preparing to unpack .../50-libice6_2%3a1.0.9-2_amd64.deb ... Unpacking libice6:amd64 (2:1.0.9-2) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../51-libicu63_63.1-6+deb10u1_amd64.deb ... Unpacking libicu63:amd64 (63.1-6+deb10u1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../52-libjbig0_2.1-3.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1+b2) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../53-libjpeg62-turbo_1%3a1.5.2-2+deb10u1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:1.5.2-2+deb10u1) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../54-liblapack3_3.8.0-2_amd64.deb ... Unpacking liblapack3:amd64 (3.8.0-2) ... Selecting previously unselected package libthai-data. Preparing to unpack .../55-libthai-data_0.1.28-2_all.deb ... Unpacking libthai-data (0.1.28-2) ... Selecting previously unselected package libthai0:amd64. Preparing to unpack .../56-libthai0_0.1.28-2_amd64.deb ... Unpacking libthai0:amd64 (0.1.28-2) ... Selecting previously unselected package libpango-1.0-0:amd64. Preparing to unpack .../57-libpango-1.0-0_1.42.4-8~deb10u1_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.42.4-8~deb10u1) ... Selecting previously unselected package libpangoft2-1.0-0:amd64. Preparing to unpack .../58-libpangoft2-1.0-0_1.42.4-8~deb10u1_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.42.4-8~deb10u1) ... Selecting previously unselected package libpangocairo-1.0-0:amd64. Preparing to unpack .../59-libpangocairo-1.0-0_1.42.4-8~deb10u1_amd64.deb ... Unpacking libpangocairo-1.0-0:amd64 (1.42.4-8~deb10u1) ... Selecting previously unselected package libpaper1:amd64. Preparing to unpack .../60-libpaper1_1.1.28_amd64.deb ... Unpacking libpaper1:amd64 (1.1.28) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../61-libpaper-utils_1.1.28_amd64.deb ... Unpacking libpaper-utils (1.1.28) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../62-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package libsm6:amd64. Preparing to unpack .../63-libsm6_2%3a1.2.3-1_amd64.deb ... Unpacking libsm6:amd64 (2:1.2.3-1) ... Selecting previously unselected package libtcl8.6:amd64. Preparing to unpack .../64-libtcl8.6_8.6.9+dfsg-2_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.9+dfsg-2) ... Selecting previously unselected package libwebp6:amd64. Preparing to unpack .../65-libwebp6_0.6.1-2_amd64.deb ... Unpacking libwebp6:amd64 (0.6.1-2) ... Selecting previously unselected package libtiff5:amd64. Preparing to unpack .../66-libtiff5_4.1.0+git191117-2~deb10u1_amd64.deb ... Unpacking libtiff5:amd64 (4.1.0+git191117-2~deb10u1) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../67-libxft2_2.3.2-2_amd64.deb ... Unpacking libxft2:amd64 (2.3.2-2) ... Selecting previously unselected package libxss1:amd64. Preparing to unpack .../68-libxss1_1%3a1.2.3-1_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:amd64. Preparing to unpack .../69-libtk8.6_8.6.9-2_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.9-2) ... Selecting previously unselected package libxt6:amd64. Preparing to unpack .../70-libxt6_1%3a1.1.5-1+b3_amd64.deb ... Unpacking libxt6:amd64 (1:1.1.5-1+b3) ... Selecting previously unselected package zip. Preparing to unpack .../71-zip_3.0-11+b1_amd64.deb ... Unpacking zip (3.0-11+b1) ... Selecting previously unselected package unzip. Preparing to unpack .../72-unzip_6.0-23+deb10u1_amd64.deb ... Unpacking unzip (6.0-23+deb10u1) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../73-xdg-utils_1.1.3-1+deb10u1_all.deb ... Unpacking xdg-utils (1.1.3-1+deb10u1) ... Selecting previously unselected package r-base-core. Preparing to unpack .../74-r-base-core_3.5.2-1_amd64.deb ... Unpacking r-base-core (3.5.2-1) ... Selecting previously unselected package r-bioc-mergeomics. Preparing to unpack .../75-r-bioc-mergeomics_1.10.0-1_all.deb ... Unpacking r-bioc-mergeomics (1.10.0-1) ... Setting up libexpat1:amd64 (2.2.6-2+deb10u1) ... Setting up libgraphite2-3:amd64 (1.3.13-7) ... Setting up libpixman-1-0:amd64 (0.36.0-1) ... Setting up lsb-base (10.2019051400) ... Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up libkeyutils1:amd64 (1.6-6) ... Setting up libpsl5:amd64 (0.20.2-2) ... Setting up libdatrie1:amd64 (0.2.12-2) ... Setting up libglib2.0-0:amd64 (2.58.3-2+deb10u2) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1d-0+deb10u3) ... Setting up unzip (6.0-23+deb10u1) ... Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libnghttp2-14:amd64 (1.36.0-2+deb10u1) ... Setting up libgomp1:amd64 (8.3.0-6) ... Setting up libldap-common (2.4.47+dfsg-3+deb10u4) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libicu63:amd64 (63.1-6+deb10u1) ... Setting up libkrb5support0:amd64 (1.17-3+deb10u1) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-1+deb10u1) ... Setting up zip (3.0-11+b1) ... Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+deb10u1) ... Setting up libx11-data (2:1.6.7-1+deb10u1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2) ... Setting up libfribidi0:amd64 (1.0.5-3.1+deb10u1) ... Setting up libquadmath0:amd64 (8.3.0-6) ... Setting up libpng16-16:amd64 (1.6.36-6) ... Setting up libtcl8.6:amd64 (8.6.9+dfsg-2) ... Setting up libwebp6:amd64 (0.6.1-2) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libk5crypto3:amd64 (1.17-3+deb10u1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-1+deb10u1) ... Setting up libgfortran5:amd64 (8.3.0-6) ... Setting up sensible-utils (0.0.12) ... Setting up libthai-data (0.1.28-2) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up libkrb5-3:amd64 (1.17-3+deb10u1) ... Setting up libtiff5:amd64 (4.1.0+git191117-2~deb10u1) ... Setting up openssl (1.1.1d-0+deb10u3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up readline-common (7.0-5) ... Setting up xdg-utils (1.1.3-1+deb10u1) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-3+deb10u4) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up libthai0:amd64 (0.1.28-2) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 128 added, 0 removed; done. Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libfreetype6:amd64 (2.9.1-3+deb10u2) ... Setting up libgssapi-krb5-2:amd64 (1.17-3+deb10u1) ... Setting up ucf (3.0038+nmu1) ... Setting up libcurl4:amd64 (7.64.0-4+deb10u1) ... Setting up libx11-6:amd64 (2:1.6.7-1+deb10u1) ... Setting up libharfbuzz0b:amd64 (2.3.1-1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libpaper1:amd64 (1.1.28) ... Creating config file /etc/papersize with new version Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libpaper-utils (1.1.28) ... Setting up libxt6:amd64 (1:1.1.5-1+b3) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libfontconfig1:amd64 (2.13.1-2) ... Setting up fontconfig (2.13.1-2) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.2-2) ... Setting up libtk8.6:amd64 (8.6.9-2) ... Setting up libpango-1.0-0:amd64 (1.42.4-8~deb10u1) ... Setting up libcairo2:amd64 (1.16.0-4) ... Setting up libpangoft2-1.0-0:amd64 (1.42.4-8~deb10u1) ... Setting up libpangocairo-1.0-0:amd64 (1.42.4-8~deb10u1) ... Setting up r-base-core (3.5.2-1) ... Creating config file /etc/R/Renviron with new version Setting up r-bioc-mergeomics (1.10.0-1) ... Processing triggers for libc-bin (2.28-10) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-y', 'install', 'r-bioc-mergeomics'] 0m18.0s INFO: Running scripts post_install 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_install_exceptions'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_install_exceptions'] 0m18.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m18.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m18.3s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpkv5lghox to testing 0m18.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m18.3s INFO: Running scripts pre_distupgrade 0m18.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m18.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_exceptions'] 0m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_exceptions'] 0m18.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m18.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m18.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m18.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'update'] 0m22.0s DUMP: Get:1 http://deb.debian.org/debian bullseye InRelease [123 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 Packages [7945 kB] Get:3 http://deb.debian.org/debian bullseye/main Translation-en [6068 kB] Fetched 14.1 MB in 3s (4774 kB/s) Reading package lists... 0m22.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'update'] 0m22.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-yf', 'dist-upgrade'] 0m46.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libicu63 libreadline7 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libgcc1 The following NEW packages will be installed: gcc-10-base libapt-pkg6.0 libbrotli1 libcrypt1 libffi7 libgcc-s1 libhogweed6 libicu67 libnettle8 libpcre2-8-0 libreadline8 logsave r-bioc-biocgenerics The following packages will be upgraded: apt base-files base-passwd bash bsdutils ca-certificates coreutils dash debconf debianutils dpkg e2fsprogs fdisk findutils fontconfig fontconfig-config fonts-dejavu-core gcc-8-base gpgv grep gzip hostname init-system-helpers libacl1 libattr1 libaudit-common libaudit1 libblas3 libblkid1 libbsd0 libbz2-1.0 libc-bin libc6 libcap-ng0 libcom-err2 libcurl4 libdatrie1 libdb5.3 libdebconfclient0 libexpat1 libext2fs2 libfdisk1 libfontconfig1 libfreetype6 libfribidi0 libgcrypt20 libgfortran5 libglib2.0-0 libgmp10 libgnutls30 libgomp1 libgpg-error0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libidn2-0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.4-2 libldap-common liblz4-1 liblzma5 libmount1 libncursesw6 libnghttp2-14 libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 librtmp1 libsasl2-2 libsasl2-modules-db libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libss2 libssl1.1 libstdc++6 libsystemd0 libtasn1-6 libtcl8.6 libthai-data libthai0 libtiff5 libtinfo6 libtk8.6 libudev1 libunistring2 libuuid1 libwebp6 libx11-6 libx11-data libxcb-render0 libxcb-shm0 libxcb1 libxt6 libzstd1 login lsb-base mawk mount ncurses-base ncurses-bin openssl passwd perl-base r-base-core r-bioc-mergeomics readline-common sensible-utils sysvinit-utils tar tzdata ucf unzip util-linux x11-common xdg-utils zlib1g 134 upgraded, 13 newly installed, 1 to remove and 0 not upgraded. Need to get 89.5 MB of archives. After this operation, 46.8 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 base-files amd64 11 [69.7 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 debianutils amd64 4.11.2 [101 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 bash amd64 5.1~rc3-1 [1415 kB] Get:4 http://deb.debian.org/debian bullseye/main amd64 bsdutils amd64 1:2.36.1-2 [148 kB] Get:5 http://deb.debian.org/debian bullseye/main amd64 gcc-10-base amd64 10.2.0-19 [200 kB] Get:6 http://deb.debian.org/debian bullseye/main amd64 libgcc-s1 amd64 10.2.0-19 [41.4 kB] Get:7 http://deb.debian.org/debian bullseye/main amd64 libcrypt1 amd64 1:4.4.17-1 [86.9 kB] Get:8 http://deb.debian.org/debian bullseye/main amd64 libc6 amd64 2.31-5 [2806 kB] Get:9 http://deb.debian.org/debian bullseye/main amd64 libc-bin amd64 2.31-5 [811 kB] Get:10 http://deb.debian.org/debian bullseye/main amd64 libpcre2-8-0 amd64 10.35-2 [244 kB] Get:11 http://deb.debian.org/debian bullseye/main amd64 libselinux1 amd64 3.1-2+b2 [88.3 kB] Get:12 http://deb.debian.org/debian bullseye/main amd64 coreutils amd64 8.32-4+b1 [2867 kB] Get:13 http://deb.debian.org/debian bullseye/main amd64 tar amd64 1.32+dfsg-1 [835 kB] Get:14 http://deb.debian.org/debian bullseye/main amd64 dpkg amd64 1.20.5 [2307 kB] Get:15 http://deb.debian.org/debian bullseye/main amd64 perl-base amd64 5.32.0-5 [1626 kB] Get:16 http://deb.debian.org/debian bullseye/main amd64 debconf all 1.5.74 [145 kB] Get:17 http://deb.debian.org/debian bullseye/main amd64 dash amd64 0.5.11+git20200708+dd9ef66-5 [115 kB] Get:18 http://deb.debian.org/debian bullseye/main amd64 findutils amd64 4.7.0+git20201010-2 [694 kB] Get:19 http://deb.debian.org/debian bullseye/main amd64 grep amd64 3.6-1 [398 kB] Get:20 http://deb.debian.org/debian bullseye/main amd64 gzip amd64 1.10-2 [131 kB] Get:21 http://deb.debian.org/debian bullseye/main amd64 hostname amd64 3.23 [14.9 kB] Get:22 http://deb.debian.org/debian bullseye/main amd64 login amd64 1:4.8.1-1 [655 kB] Get:23 http://deb.debian.org/debian bullseye/main amd64 libtinfo6 amd64 6.2+20201114-1 [341 kB] Get:24 http://deb.debian.org/debian bullseye/main amd64 libncursesw6 amd64 6.2+20201114-1 [133 kB] Get:25 http://deb.debian.org/debian bullseye/main amd64 ncurses-bin amd64 6.2+20201114-1 [428 kB] Get:26 http://deb.debian.org/debian bullseye/main amd64 libblkid1 amd64 2.36.1-2 [192 kB] Get:27 http://deb.debian.org/debian bullseye/main amd64 libmount1 amd64 2.36.1-2 [210 kB] Get:28 http://deb.debian.org/debian bullseye/main amd64 libsmartcols1 amd64 2.36.1-2 [156 kB] Get:29 http://deb.debian.org/debian bullseye/main amd64 libuuid1 amd64 2.36.1-2 [82.7 kB] Get:30 http://deb.debian.org/debian bullseye/main amd64 libfdisk1 amd64 2.36.1-2 [236 kB] Get:31 http://deb.debian.org/debian bullseye/main amd64 fdisk amd64 2.36.1-2 [191 kB] Get:32 http://deb.debian.org/debian bullseye/main amd64 util-linux amd64 2.36.1-2 [1139 kB] Get:33 http://deb.debian.org/debian bullseye/main amd64 libstdc++6 amd64 10.2.0-19 [492 kB] Get:34 http://deb.debian.org/debian bullseye/main amd64 libbz2-1.0 amd64 1.0.8-4 [45.8 kB] Get:35 http://deb.debian.org/debian bullseye/main amd64 libgpg-error0 amd64 1.38-2 [77.5 kB] Get:36 http://deb.debian.org/debian bullseye/main amd64 libgcrypt20 amd64 1.8.7-2 [563 kB] Get:37 http://deb.debian.org/debian bullseye/main amd64 liblz4-1 amd64 1.9.2-2 [57.2 kB] Get:38 http://deb.debian.org/debian bullseye/main amd64 liblzma5 amd64 5.2.4-1+b1 [153 kB] Get:39 http://deb.debian.org/debian bullseye/main amd64 libzstd1 amd64 1.4.5+dfsg-4 [307 kB] Get:40 http://deb.debian.org/debian bullseye/main amd64 libsystemd0 amd64 247.1-3 [374 kB] Get:41 http://deb.debian.org/debian bullseye/main amd64 libudev1 amd64 247.1-3 [165 kB] Get:42 http://deb.debian.org/debian bullseye/main amd64 zlib1g amd64 1:1.2.11.dfsg-2 [90.4 kB] Get:43 http://deb.debian.org/debian bullseye/main amd64 libapt-pkg6.0 amd64 2.1.12 [995 kB] Get:44 http://deb.debian.org/debian bullseye/main amd64 libnettle8 amd64 3.6-2 [240 kB] Get:45 http://deb.debian.org/debian bullseye/main amd64 libgmp10 amd64 2:6.2.1+dfsg-1 [564 kB] Get:46 http://deb.debian.org/debian bullseye/main amd64 libhogweed6 amd64 3.6-2 [314 kB] Get:47 http://deb.debian.org/debian bullseye/main amd64 libffi7 amd64 3.3-5 [23.0 kB] Get:48 http://deb.debian.org/debian bullseye/main amd64 libp11-kit0 amd64 0.23.21-2 [335 kB] Get:49 http://deb.debian.org/debian bullseye/main amd64 libtasn1-6 amd64 4.16.0-2 [55.0 kB] Get:50 http://deb.debian.org/debian bullseye/main amd64 libunistring2 amd64 0.9.10-4 [379 kB] Get:51 http://deb.debian.org/debian bullseye/main amd64 libidn2-0 amd64 2.3.0-4 [85.9 kB] Get:52 http://deb.debian.org/debian bullseye/main amd64 libgnutls30 amd64 3.6.15-4 [1189 kB] Get:53 http://deb.debian.org/debian bullseye/main amd64 libseccomp2 amd64 2.5.0-3+b1 [48.5 kB] Get:54 http://deb.debian.org/debian bullseye/main amd64 gpgv amd64 2.2.20-1 [608 kB] Get:55 http://deb.debian.org/debian bullseye/main amd64 apt amd64 2.1.12 [1468 kB] Get:56 http://deb.debian.org/debian bullseye/main amd64 libdebconfclient0 amd64 0.255 [49.6 kB] Get:57 http://deb.debian.org/debian bullseye/main amd64 base-passwd amd64 3.5.48 [57.5 kB] Get:58 http://deb.debian.org/debian bullseye/main amd64 init-system-helpers all 1.59 [47.2 kB] Get:59 http://deb.debian.org/debian bullseye/main amd64 ncurses-base all 6.2+20201114-1 [271 kB] Get:60 http://deb.debian.org/debian bullseye/main amd64 lsb-base all 11.1.0 [28.7 kB] Get:61 http://deb.debian.org/debian bullseye/main amd64 sysvinit-utils amd64 2.96-5 [25.0 kB] Get:62 http://deb.debian.org/debian bullseye/main amd64 libext2fs2 amd64 1.45.6-1 [248 kB] Get:63 http://deb.debian.org/debian bullseye/main amd64 e2fsprogs amd64 1.45.6-1 [594 kB] Get:64 http://deb.debian.org/debian bullseye/main amd64 logsave amd64 1.45.6-1 [72.4 kB] Get:65 http://deb.debian.org/debian bullseye/main amd64 mount amd64 2.36.1-2 [184 kB] Get:66 http://deb.debian.org/debian bullseye/main amd64 libaudit-common all 1:2.8.5-3.1 [23.7 kB] Get:67 http://deb.debian.org/debian bullseye/main amd64 libcap-ng0 amd64 0.7.9-2.2+b1 [14.8 kB] Get:68 http://deb.debian.org/debian bullseye/main amd64 libaudit1 amd64 1:2.8.5-3.1+b1 [58.8 kB] Get:69 http://deb.debian.org/debian bullseye/main amd64 libsepol1 amd64 3.1-1 [265 kB] Get:70 http://deb.debian.org/debian bullseye/main amd64 libsemanage-common all 3.1-1 [21.3 kB] Get:71 http://deb.debian.org/debian bullseye/main amd64 libsemanage1 amd64 3.1-1+b2 [99.3 kB] Get:72 http://deb.debian.org/debian bullseye/main amd64 passwd amd64 1:4.8.1-1 [990 kB] Get:73 http://deb.debian.org/debian bullseye/main amd64 libquadmath0 amd64 10.2.0-19 [145 kB] Get:74 http://deb.debian.org/debian bullseye/main amd64 libgomp1 amd64 10.2.0-19 [99.9 kB] Get:75 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.0-19 [727 kB] Get:76 http://deb.debian.org/debian bullseye/main amd64 gcc-8-base amd64 8.4.0-5 [195 kB] Get:77 http://deb.debian.org/debian bullseye/main amd64 libacl1 amd64 2.2.53-8 [31.1 kB] Get:78 http://deb.debian.org/debian bullseye/main amd64 libattr1 amd64 1:2.4.48-5 [21.5 kB] Get:79 http://deb.debian.org/debian bullseye/main amd64 libdb5.3 amd64 5.3.28+dfsg1-0.6 [683 kB] Get:80 http://deb.debian.org/debian bullseye/main amd64 libpcre3 amd64 2:8.39-13 [343 kB] Get:81 http://deb.debian.org/debian bullseye/main amd64 mawk amd64 1.3.4.20200120-2 [112 kB] Get:82 http://deb.debian.org/debian bullseye/main amd64 tzdata all 2020d-1 [282 kB] Get:83 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1~rc3-1 [73.7 kB] Get:84 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1~rc3-1 [168 kB] Get:85 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:86 http://deb.debian.org/debian bullseye/main amd64 ucf all 3.0043 [74.0 kB] Get:87 http://deb.debian.org/debian bullseye/main amd64 libssl1.1 amd64 1.1.1h-1 [1550 kB] Get:88 http://deb.debian.org/debian bullseye/main amd64 openssl amd64 1.1.1h-1 [848 kB] Get:89 http://deb.debian.org/debian bullseye/main amd64 ca-certificates all 20200601 [158 kB] Get:90 http://deb.debian.org/debian bullseye/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:91 http://deb.debian.org/debian bullseye/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get:92 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-1 [96.9 kB] Get:93 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get:94 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get:95 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.2+dfsg-4 [410 kB] Get:96 http://deb.debian.org/debian bullseye/main amd64 libfontconfig1 amd64 2.13.1-4.2 [347 kB] Get:97 http://deb.debian.org/debian bullseye/main amd64 fontconfig amd64 2.13.1-4.2 [417 kB] Get:98 http://deb.debian.org/debian bullseye/main amd64 libblas3 amd64 3.9.0-3 [153 kB] Get:99 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:100 http://deb.debian.org/debian bullseye/main amd64 libcom-err2 amd64 1.45.6-1 [71.7 kB] Get:101 http://deb.debian.org/debian bullseye/main amd64 libgssapi-krb5-2 amd64 1.18.3-4 [165 kB] Get:102 http://deb.debian.org/debian bullseye/main amd64 libkrb5-3 amd64 1.18.3-4 [362 kB] Get:103 http://deb.debian.org/debian bullseye/main amd64 libkrb5support0 amd64 1.18.3-4 [65.1 kB] Get:104 http://deb.debian.org/debian bullseye/main amd64 libk5crypto3 amd64 1.18.3-4 [113 kB] Get:105 http://deb.debian.org/debian bullseye/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB] Get:106 http://deb.debian.org/debian bullseye/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [69.0 kB] Get:107 http://deb.debian.org/debian bullseye/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [106 kB] Get:108 http://deb.debian.org/debian bullseye/main amd64 libldap-2.4-2 amd64 2.4.56+dfsg-1 [232 kB] Get:109 http://deb.debian.org/debian bullseye/main amd64 libnghttp2-14 amd64 1.42.0-1 [78.5 kB] Get:110 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.1 [55.3 kB] Get:111 http://deb.debian.org/debian bullseye/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:112 http://deb.debian.org/debian bullseye/main amd64 libcurl4 amd64 7.72.0-1 [336 kB] Get:113 http://deb.debian.org/debian bullseye/main amd64 libdatrie1 amd64 0.2.12-3 [39.5 kB] Get:114 http://deb.debian.org/debian bullseye/main amd64 libfribidi0 amd64 1.0.8-2 [64.8 kB] Get:115 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-0 amd64 2.66.3-2 [1366 kB] Get:116 http://deb.debian.org/debian bullseye/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:117 http://deb.debian.org/debian bullseye/main amd64 libharfbuzz0b amd64 2.6.7-1 [1467 kB] Get:118 http://deb.debian.org/debian bullseye/main amd64 x11-common all 1:7.7+21 [252 kB] Get:119 http://deb.debian.org/debian bullseye/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get:120 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:121 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.5-1.1 [149 kB] Get:122 http://deb.debian.org/debian bullseye/main amd64 liblapack3 amd64 3.9.0-3 [2166 kB] Get:123 http://deb.debian.org/debian bullseye/main amd64 libldap-common all 2.4.56+dfsg-1 [95.1 kB] Get:124 http://deb.debian.org/debian bullseye/main amd64 libpangoft2-1.0-0 amd64 1.46.2-3 [62.2 kB] Get:125 http://deb.debian.org/debian bullseye/main amd64 libpangocairo-1.0-0 amd64 1.46.2-3 [50.6 kB] Get:126 http://deb.debian.org/debian bullseye/main amd64 libthai-data all 0.1.28-3 [170 kB] Get:127 http://deb.debian.org/debian bullseye/main amd64 libthai0 amd64 0.1.28-3 [54.2 kB] Get:128 http://deb.debian.org/debian bullseye/main amd64 libpango-1.0-0 amd64 1.46.2-3 [191 kB] Get:129 http://deb.debian.org/debian bullseye/main amd64 libpaper1 amd64 1.1.28+b1 [21.6 kB] Get:130 http://deb.debian.org/debian bullseye/main amd64 libpaper-utils amd64 1.1.28+b1 [18.3 kB] Get:131 http://deb.debian.org/debian bullseye/main amd64 libpixman-1-0 amd64 0.40.0-1 [543 kB] Get:132 http://deb.debian.org/debian bullseye/main amd64 libss2 amd64 1.45.6-1 [76.2 kB] Get:133 http://deb.debian.org/debian bullseye/main amd64 libtcl8.6 amd64 8.6.10+dfsg-1 [1007 kB] Get:134 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2+b1 [261 kB] Get:135 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.1.0+git191117-2 [271 kB] Get:136 http://deb.debian.org/debian bullseye/main amd64 libx11-data all 2:1.6.12-1 [311 kB] Get:137 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-2 [139 kB] Get:138 http://deb.debian.org/debian bullseye/main amd64 libx11-6 amd64 2:1.6.12-1 [770 kB] Get:139 http://deb.debian.org/debian bullseye/main amd64 libtk8.6 amd64 8.6.10-1 [773 kB] Get:140 http://deb.debian.org/debian bullseye/main amd64 libxcb-render0 amd64 1.14-2 [111 kB] Get:141 http://deb.debian.org/debian bullseye/main amd64 libxcb-shm0 amd64 1.14-2 [101 kB] Get:142 http://deb.debian.org/debian bullseye/main amd64 libxt6 amd64 1:1.2.0-1 [189 kB] Get:143 http://deb.debian.org/debian bullseye/main amd64 r-bioc-biocgenerics all 0.36.0-1 [648 kB] Get:144 http://deb.debian.org/debian bullseye/main amd64 r-bioc-mergeomics all 1.18.0-1 [2725 kB] Get:145 http://deb.debian.org/debian bullseye/main amd64 unzip amd64 6.0-25 [172 kB] Get:146 http://deb.debian.org/debian bullseye/main amd64 xdg-utils all 1.1.3-2 [74.6 kB] Get:147 http://deb.debian.org/debian bullseye/main amd64 r-base-core amd64 4.0.3-1 [25.1 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 89.5 MB in 3s (31.5 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9284 files and directories currently installed.) Preparing to unpack .../base-files_11_amd64.deb ... Unpacking base-files (11) over (10.3+deb10u7) ... Setting up base-files (11) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Updating /root/.profile to current default. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9284 files and directories currently installed.) Preparing to unpack .../debianutils_4.11.2_amd64.deb ... Unpacking debianutils (4.11.2) over (4.8.6.1) ... Setting up debianutils (4.11.2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9284 files and directories currently installed.) Preparing to unpack .../bash_5.1~rc3-1_amd64.deb ... Unpacking bash (5.1~rc3-1) over (5.0-4) ... Setting up bash (5.1~rc3-1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9285 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.36.1-2_amd64.deb ... Unpacking bsdutils (1:2.36.1-2) over (1:2.33.1-0.1) ... Setting up bsdutils (1:2.36.1-2) ... Selecting previously unselected package gcc-10-base:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9288 files and directories currently installed.) Preparing to unpack .../gcc-10-base_10.2.0-19_amd64.deb ... Unpacking gcc-10-base:amd64 (10.2.0-19) ... Setting up gcc-10-base:amd64 (10.2.0-19) ... Selecting previously unselected package libgcc-s1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9293 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10.2.0-19_amd64.deb ... Unpacking libgcc-s1:amd64 (10.2.0-19) ... Replacing files in old package libgcc1:amd64 (1:8.3.0-6) ... Setting up libgcc-s1:amd64 (10.2.0-19) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9295 files and directories currently installed.) Preparing to unpack .../libc6_2.31-5_amd64.deb ... Unpacking libc6:amd64 (2.31-5) over (2.28-10) ... Selecting previously unselected package libcrypt1:amd64. Preparing to unpack .../libcrypt1_1%3a4.4.17-1_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.4.17-1) ... Setting up libcrypt1:amd64 (1:4.4.17-1) ... Setting up libc6:amd64 (2.31-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9295 files and directories currently installed.) Preparing to unpack .../libc-bin_2.31-5_amd64.deb ... Unpacking libc-bin (2.31-5) over (2.28-10) ... Setting up libc-bin (2.31-5) ... Selecting previously unselected package libpcre2-8-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9295 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.35-2_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.35-2) ... Setting up libpcre2-8-0:amd64 (10.35-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9302 files and directories currently installed.) Preparing to unpack .../libselinux1_3.1-2+b2_amd64.deb ... Unpacking libselinux1:amd64 (3.1-2+b2) over (2.8-1+b1) ... Setting up libselinux1:amd64 (3.1-2+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9302 files and directories currently installed.) Preparing to unpack .../coreutils_8.32-4+b1_amd64.deb ... Unpacking coreutils (8.32-4+b1) over (8.30-3) ... Setting up coreutils (8.32-4+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9392 files and directories currently installed.) Preparing to unpack .../tar_1.32+dfsg-1_amd64.deb ... Unpacking tar (1.32+dfsg-1) over (1.30+dfsg-6) ... Setting up tar (1.32+dfsg-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9392 files and directories currently installed.) Preparing to unpack .../archives/dpkg_1.20.5_amd64.deb ... Unpacking dpkg (1.20.5) over (1.19.7) ... Setting up dpkg (1.20.5) ... Installing new version of config file /etc/cron.daily/dpkg ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9401 files and directories currently installed.) Preparing to unpack .../perl-base_5.32.0-5_amd64.deb ... Unpacking perl-base (5.32.0-5) over (5.28.1-6+deb10u1) ... Setting up perl-base (5.32.0-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9466 files and directories currently installed.) Preparing to unpack .../debconf_1.5.74_all.deb ... Unpacking debconf (1.5.74) over (1.5.71) ... Setting up debconf (1.5.74) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9466 files and directories currently installed.) Preparing to unpack .../dash_0.5.11+git20200708+dd9ef66-5_amd64.deb ... Unpacking dash (0.5.11+git20200708+dd9ef66-5) over (0.5.10.2-5) ... Setting up dash (0.5.11+git20200708+dd9ef66-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9466 files and directories currently installed.) Preparing to unpack .../findutils_4.7.0+git20201010-2_amd64.deb ... Unpacking findutils (4.7.0+git20201010-2) over (4.6.0+git+20190209-2) ... Setting up findutils (4.7.0+git20201010-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9466 files and directories currently installed.) Preparing to unpack .../archives/grep_3.6-1_amd64.deb ... Unpacking grep (3.6-1) over (3.3-1) ... Setting up grep (3.6-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9467 files and directories currently installed.) Preparing to unpack .../archives/gzip_1.10-2_amd64.deb ... Unpacking gzip (1.10-2) over (1.9-3) ... Setting up gzip (1.10-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9467 files and directories currently installed.) Preparing to unpack .../hostname_3.23_amd64.deb ... Unpacking hostname (3.23) over (3.21) ... Setting up hostname (3.23) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9467 files and directories currently installed.) Preparing to unpack .../login_1%3a4.8.1-1_amd64.deb ... Unpacking login (1:4.8.1-1) over (1:4.5-1.1) ... Setting up login (1:4.8.1-1) ... Installing new version of config file /etc/pam.d/login ... Removing obsolete conffile /etc/securetty ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.2+20201114-1_amd64.deb ... Unpacking libtinfo6:amd64 (6.2+20201114-1) over (6.1+20181013-2+deb10u2) ... Setting up libtinfo6:amd64 (6.2+20201114-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.2+20201114-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.2+20201114-1) over (6.1+20181013-2+deb10u2) ... Setting up libncursesw6:amd64 (6.2+20201114-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.2+20201114-1_amd64.deb ... Unpacking ncurses-bin (6.2+20201114-1) over (6.1+20181013-2+deb10u2) ... Setting up ncurses-bin (6.2+20201114-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../libblkid1_2.36.1-2_amd64.deb ... Unpacking libblkid1:amd64 (2.36.1-2) over (2.33.1-0.1) ... Setting up libblkid1:amd64 (2.36.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../libmount1_2.36.1-2_amd64.deb ... Unpacking libmount1:amd64 (2.36.1-2) over (2.33.1-0.1) ... Setting up libmount1:amd64 (2.36.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.36.1-2_amd64.deb ... Unpacking libsmartcols1:amd64 (2.36.1-2) over (2.33.1-0.1) ... Setting up libsmartcols1:amd64 (2.36.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../libuuid1_2.36.1-2_amd64.deb ... Unpacking libuuid1:amd64 (2.36.1-2) over (2.33.1-0.1) ... Setting up libuuid1:amd64 (2.36.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../libfdisk1_2.36.1-2_amd64.deb ... Unpacking libfdisk1:amd64 (2.36.1-2) over (2.33.1-0.1) ... Setting up libfdisk1:amd64 (2.36.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../fdisk_2.36.1-2_amd64.deb ... Unpacking fdisk (2.36.1-2) over (2.33.1-0.1) ... Setting up fdisk (2.36.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9463 files and directories currently installed.) Preparing to unpack .../util-linux_2.36.1-2_amd64.deb ... Unpacking util-linux (2.36.1-2) over (2.33.1-0.1) ... Setting up util-linux (2.36.1-2) ... Installing new version of config file /etc/init.d/hwclock.sh ... Installing new version of config file /etc/pam.d/su ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9465 files and directories currently installed.) Preparing to unpack .../libstdc++6_10.2.0-19_amd64.deb ... Unpacking libstdc++6:amd64 (10.2.0-19) over (8.3.0-6) ... Setting up libstdc++6:amd64 (10.2.0-19) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9465 files and directories currently installed.) Preparing to unpack .../libbz2-1.0_1.0.8-4_amd64.deb ... Unpacking libbz2-1.0:amd64 (1.0.8-4) over (1.0.6-9.2~deb10u1) ... Setting up libbz2-1.0:amd64 (1.0.8-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9465 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.38-2_amd64.deb ... Unpacking libgpg-error0:amd64 (1.38-2) over (1.35-1) ... Setting up libgpg-error0:amd64 (1.38-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9465 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.8.7-2_amd64.deb ... Unpacking libgcrypt20:amd64 (1.8.7-2) over (1.8.4-5) ... Setting up libgcrypt20:amd64 (1.8.7-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9465 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.9.2-2_amd64.deb ... Unpacking liblz4-1:amd64 (1.9.2-2) over (1.8.3-1) ... Setting up liblz4-1:amd64 (1.9.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9465 files and directories currently installed.) Preparing to unpack .../liblzma5_5.2.4-1+b1_amd64.deb ... Unpacking liblzma5:amd64 (5.2.4-1+b1) over (5.2.4-1) ... Setting up liblzma5:amd64 (5.2.4-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9466 files and directories currently installed.) Preparing to unpack .../libzstd1_1.4.5+dfsg-4_amd64.deb ... Unpacking libzstd1:amd64 (1.4.5+dfsg-4) over (1.3.8+dfsg-3) ... Setting up libzstd1:amd64 (1.4.5+dfsg-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9466 files and directories currently installed.) Preparing to unpack .../libsystemd0_247.1-3_amd64.deb ... Unpacking libsystemd0:amd64 (247.1-3) over (241-7~deb10u5) ... Setting up libsystemd0:amd64 (247.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9466 files and directories currently installed.) Preparing to unpack .../libudev1_247.1-3_amd64.deb ... Unpacking libudev1:amd64 (247.1-3) over (241-7~deb10u5) ... Setting up libudev1:amd64 (247.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9466 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.2.11.dfsg-2_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.11.dfsg-2) over (1:1.2.11.dfsg-1) ... Setting up zlib1g:amd64 (1:1.2.11.dfsg-2) ... Selecting previously unselected package libapt-pkg6.0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9466 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.1.12_amd64.deb ... Unpacking libapt-pkg6.0:amd64 (2.1.12) ... Setting up libapt-pkg6.0:amd64 (2.1.12) ... Selecting previously unselected package libnettle8:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9515 files and directories currently installed.) Preparing to unpack .../libnettle8_3.6-2_amd64.deb ... Unpacking libnettle8:amd64 (3.6-2) ... Setting up libnettle8:amd64 (3.6-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9523 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.2.1+dfsg-1_amd64.deb ... Unpacking libgmp10:amd64 (2:6.2.1+dfsg-1) over (2:6.1.2+dfsg-4) ... Setting up libgmp10:amd64 (2:6.2.1+dfsg-1) ... Selecting previously unselected package libhogweed6:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9524 files and directories currently installed.) Preparing to unpack .../libhogweed6_3.6-2_amd64.deb ... Unpacking libhogweed6:amd64 (3.6-2) ... Setting up libhogweed6:amd64 (3.6-2) ... Selecting previously unselected package libffi7:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9530 files and directories currently installed.) Preparing to unpack .../libffi7_3.3-5_amd64.deb ... Unpacking libffi7:amd64 (3.3-5) ... Setting up libffi7:amd64 (3.3-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9535 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.23.21-2_amd64.deb ... Unpacking libp11-kit0:amd64 (0.23.21-2) over (0.23.15-2) ... Setting up libp11-kit0:amd64 (0.23.21-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9535 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.16.0-2_amd64.deb ... Unpacking libtasn1-6:amd64 (4.16.0-2) over (4.13-3) ... Setting up libtasn1-6:amd64 (4.16.0-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9535 files and directories currently installed.) Preparing to unpack .../libunistring2_0.9.10-4_amd64.deb ... Unpacking libunistring2:amd64 (0.9.10-4) over (0.9.10-1) ... Setting up libunistring2:amd64 (0.9.10-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9535 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.0-4_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.0-4) over (2.0.5-1+deb10u1) ... Setting up libidn2-0:amd64 (2.3.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9536 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.15-4_amd64.deb ... Unpacking libgnutls30:amd64 (3.6.15-4) over (3.6.7-4+deb10u5) ... Setting up libgnutls30:amd64 (3.6.15-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9535 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.5.0-3+b1_amd64.deb ... Unpacking libseccomp2:amd64 (2.5.0-3+b1) over (2.3.3-4) ... Setting up libseccomp2:amd64 (2.5.0-3+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9536 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.20-1_amd64.deb ... Unpacking gpgv (2.2.20-1) over (2.2.12-1+deb10u1) ... Setting up gpgv (2.2.20-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9536 files and directories currently installed.) Preparing to unpack .../archives/apt_2.1.12_amd64.deb ... Unpacking apt (2.1.12) over (1.8.2.1) ... Setting up apt (2.1.12) ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9543 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.255_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.255) over (0.249) ... Setting up libdebconfclient0:amd64 (0.255) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9543 files and directories currently installed.) Preparing to unpack .../base-passwd_3.5.48_amd64.deb ... Unpacking base-passwd (3.5.48) over (3.5.46) ... Setting up base-passwd (3.5.48) ... Changing home-directory of irc from /var/run/ircd to /run/ircd 1 changes have been made, rewriting files Writing passwd-file to /etc/passwd Writing shadow-file to /etc/shadow Writing group-file to /etc/group (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9543 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.59_all.deb ... Unpacking init-system-helpers (1.59) over (1.56+nmu1) ... Setting up init-system-helpers (1.59) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9544 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.2+20201114-1_all.deb ... Unpacking ncurses-base (6.2+20201114-1) over (6.1+20181013-2+deb10u2) ... Setting up ncurses-base (6.2+20201114-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9547 files and directories currently installed.) Preparing to unpack .../lsb-base_11.1.0_all.deb ... Unpacking lsb-base (11.1.0) over (10.2019051400) ... Setting up lsb-base (11.1.0) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9547 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.96-5_amd64.deb ... Unpacking sysvinit-utils (2.96-5) over (2.93-8) ... Setting up sysvinit-utils (2.96-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9545 files and directories currently installed.) Removing libgcc1:amd64 (1:8.3.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9543 files and directories currently installed.) Preparing to unpack .../libext2fs2_1.45.6-1_amd64.deb ... Unpacking libext2fs2:amd64 (1.45.6-1) over (1.44.5-1+deb10u3) ... Setting up libext2fs2:amd64 (1.45.6-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9543 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.45.6-1_amd64.deb ... Unpacking e2fsprogs (1.45.6-1) over (1.44.5-1+deb10u3) ... Selecting previously unselected package logsave. Preparing to unpack .../logsave_1.45.6-1_amd64.deb ... Unpacking logsave (1.45.6-1) ... Preparing to unpack .../mount_2.36.1-2_amd64.deb ... Unpacking mount (2.36.1-2) over (2.33.1-0.1) ... Preparing to unpack .../libaudit-common_1%3a2.8.5-3.1_all.deb ... Unpacking libaudit-common (1:2.8.5-3.1) over (1:2.8.4-3) ... Setting up libaudit-common (1:2.8.5-3.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9564 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.7.9-2.2+b1_amd64.deb ... Unpacking libcap-ng0:amd64 (0.7.9-2.2+b1) over (0.7.9-2) ... Setting up libcap-ng0:amd64 (0.7.9-2.2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9565 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a2.8.5-3.1+b1_amd64.deb ... Unpacking libaudit1:amd64 (1:2.8.5-3.1+b1) over (1:2.8.4-3) ... Setting up libaudit1:amd64 (1:2.8.5-3.1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9566 files and directories currently installed.) Preparing to unpack .../libsepol1_3.1-1_amd64.deb ... Unpacking libsepol1:amd64 (3.1-1) over (2.8-1) ... Setting up libsepol1:amd64 (3.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9566 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.1-1_all.deb ... Unpacking libsemanage-common (3.1-1) over (2.8-2) ... Setting up libsemanage-common (3.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9567 files and directories currently installed.) Preparing to unpack .../libsemanage1_3.1-1+b2_amd64.deb ... Unpacking libsemanage1:amd64 (3.1-1+b2) over (2.8-2) ... Setting up libsemanage1:amd64 (3.1-1+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9568 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.8.1-1_amd64.deb ... Unpacking passwd (1:4.8.1-1) over (1:4.5-1.1) ... Setting up passwd (1:4.8.1-1) ... Installing new version of config file /etc/default/useradd ... Removing obsolete conffile /etc/cron.daily/passwd ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9561 files and directories currently installed.) Preparing to unpack .../libquadmath0_10.2.0-19_amd64.deb ... Unpacking libquadmath0:amd64 (10.2.0-19) over (8.3.0-6) ... Preparing to unpack .../libgomp1_10.2.0-19_amd64.deb ... Unpacking libgomp1:amd64 (10.2.0-19) over (8.3.0-6) ... Preparing to unpack .../libgfortran5_10.2.0-19_amd64.deb ... Unpacking libgfortran5:amd64 (10.2.0-19) over (8.3.0-6) ... Preparing to unpack .../gcc-8-base_8.4.0-5_amd64.deb ... Unpacking gcc-8-base:amd64 (8.4.0-5) over (8.3.0-6) ... Setting up gcc-8-base:amd64 (8.4.0-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9561 files and directories currently installed.) Preparing to unpack .../libacl1_2.2.53-8_amd64.deb ... Unpacking libacl1:amd64 (2.2.53-8) over (2.2.53-4) ... Setting up libacl1:amd64 (2.2.53-8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9561 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.4.48-5_amd64.deb ... Unpacking libattr1:amd64 (1:2.4.48-5) over (1:2.4.48-4) ... Setting up libattr1:amd64 (1:2.4.48-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9561 files and directories currently installed.) Preparing to unpack .../libdb5.3_5.3.28+dfsg1-0.6_amd64.deb ... Unpacking libdb5.3:amd64 (5.3.28+dfsg1-0.6) over (5.3.28+dfsg1-0.5) ... Setting up libdb5.3:amd64 (5.3.28+dfsg1-0.6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9561 files and directories currently installed.) Preparing to unpack .../libpcre3_2%3a8.39-13_amd64.deb ... Unpacking libpcre3:amd64 (2:8.39-13) over (2:8.39-12) ... Setting up libpcre3:amd64 (2:8.39-13) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9561 files and directories currently installed.) Preparing to unpack .../00-mawk_1.3.4.20200120-2_amd64.deb ... Unpacking mawk (1.3.4.20200120-2) over (1.3.3-17+b3) ... Preparing to unpack .../01-tzdata_2020d-1_all.deb ... Unpacking tzdata (2020d-1) over (2020d-0+deb10u1) ... Preparing to unpack .../02-readline-common_8.1~rc3-1_all.deb ... Unpacking readline-common (8.1~rc3-1) over (7.0-5) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../03-libreadline8_8.1~rc3-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1~rc3-1) ... Preparing to unpack .../04-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) over (0.0.12) ... Preparing to unpack .../05-ucf_3.0043_all.deb ... Unpacking ucf (3.0043) over (3.0038+nmu1) ... Preparing to unpack .../06-libssl1.1_1.1.1h-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1h-1) over (1.1.1d-0+deb10u3) ... Preparing to unpack .../07-openssl_1.1.1h-1_amd64.deb ... Unpacking openssl (1.1.1h-1) over (1.1.1d-0+deb10u3) ... Preparing to unpack .../08-ca-certificates_20200601_all.deb ... Unpacking ca-certificates (20200601) over (20190110) ... Preparing to unpack .../09-fonts-dejavu-core_2.37-2_all.deb ... Unpacking fonts-dejavu-core (2.37-2) over (2.37-1) ... Preparing to unpack .../10-fontconfig-config_2.13.1-4.2_all.deb ... Unpacking fontconfig-config (2.13.1-4.2) over (2.13.1-2) ... Preparing to unpack .../11-libexpat1_2.2.10-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-1) over (2.2.6-2+deb10u1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../12-libbrotli1_1.0.9-2+b2_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b2) ... Preparing to unpack .../13-libpng16-16_1.6.37-3_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.37-3) over (1.6.36-6) ... Preparing to unpack .../14-libfreetype6_2.10.2+dfsg-4_amd64.deb ... Unpacking libfreetype6:amd64 (2.10.2+dfsg-4) over (2.9.1-3+deb10u2) ... Preparing to unpack .../15-libfontconfig1_2.13.1-4.2_amd64.deb ... Unpacking libfontconfig1:amd64 (2.13.1-4.2) over (2.13.1-2) ... Preparing to unpack .../16-fontconfig_2.13.1-4.2_amd64.deb ... Unpacking fontconfig (2.13.1-4.2) over (2.13.1-2) ... Preparing to unpack .../17-libblas3_3.9.0-3_amd64.deb ... Unpacking libblas3:amd64 (3.9.0-3) over (3.8.0-2) ... Preparing to unpack .../18-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) over (0.9.1-2) ... Preparing to unpack .../19-libcom-err2_1.45.6-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.45.6-1) over (1.44.5-1+deb10u3) ... Preparing to unpack .../20-libgssapi-krb5-2_1.18.3-4_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.18.3-4) over (1.17-3+deb10u1) ... Preparing to unpack .../21-libkrb5-3_1.18.3-4_amd64.deb ... Unpacking libkrb5-3:amd64 (1.18.3-4) over (1.17-3+deb10u1) ... Preparing to unpack .../22-libkrb5support0_1.18.3-4_amd64.deb ... Unpacking libkrb5support0:amd64 (1.18.3-4) over (1.17-3+deb10u1) ... Preparing to unpack .../23-libk5crypto3_1.18.3-4_amd64.deb ... Unpacking libk5crypto3:amd64 (1.18.3-4) over (1.17-3+deb10u1) ... Preparing to unpack .../24-libkeyutils1_1.6.1-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.1-2) over (1.6-6) ... Preparing to unpack .../25-libsasl2-modules-db_2.1.27+dfsg-2_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-2) over (2.1.27+dfsg-1+deb10u1) ... Preparing to unpack .../26-libsasl2-2_2.1.27+dfsg-2_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-2) over (2.1.27+dfsg-1+deb10u1) ... Preparing to unpack .../27-libldap-2.4-2_2.4.56+dfsg-1_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.56+dfsg-1) over (2.4.47+dfsg-3+deb10u4) ... Preparing to unpack .../28-libnghttp2-14_1.42.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.42.0-1) over (1.36.0-2+deb10u1) ... Preparing to unpack .../29-libpsl5_0.21.0-1.1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.1) over (0.20.2-2) ... Preparing to unpack .../30-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) over (2.4+20151223.gitfa8646d.1-2) ... Preparing to unpack .../31-libcurl4_7.72.0-1_amd64.deb ... Unpacking libcurl4:amd64 (7.72.0-1) over (7.64.0-4+deb10u1) ... Preparing to unpack .../32-libdatrie1_0.2.12-3_amd64.deb ... Unpacking libdatrie1:amd64 (0.2.12-3) over (0.2.12-2) ... Preparing to unpack .../33-libfribidi0_1.0.8-2_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.8-2) over (1.0.5-3.1+deb10u1) ... Preparing to unpack .../34-libglib2.0-0_2.66.3-2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.66.3-2) over (2.58.3-2+deb10u2) ... Preparing to unpack .../35-libgraphite2-3_1.3.14-1_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-1) over (1.3.13-7) ... Preparing to unpack .../36-libharfbuzz0b_2.6.7-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (2.6.7-1) over (2.3.1-1) ... Preparing to unpack .../37-x11-common_1%3a7.7+21_all.deb ... Unpacking x11-common (1:7.7+21) over (1:7.7+19) ... Preparing to unpack .../38-libice6_2%3a1.0.10-1_amd64.deb ... Unpacking libice6:amd64 (2:1.0.10-1) over (2:1.0.9-2) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../39-libicu67_67.1-4_amd64.deb ... Unpacking libicu67:amd64 (67.1-4) ... Preparing to unpack .../40-libjpeg62-turbo_1%3a2.0.5-1.1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.0.5-1.1) over (1:1.5.2-2+deb10u1) ... Preparing to unpack .../41-liblapack3_3.9.0-3_amd64.deb ... Unpacking liblapack3:amd64 (3.9.0-3) over (3.8.0-2) ... Preparing to unpack .../42-libldap-common_2.4.56+dfsg-1_all.deb ... Unpacking libldap-common (2.4.56+dfsg-1) over (2.4.47+dfsg-3+deb10u4) ... Preparing to unpack .../43-libpangoft2-1.0-0_1.46.2-3_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.46.2-3) over (1.42.4-8~deb10u1) ... Preparing to unpack .../44-libpangocairo-1.0-0_1.46.2-3_amd64.deb ... Unpacking libpangocairo-1.0-0:amd64 (1.46.2-3) over (1.42.4-8~deb10u1) ... Preparing to unpack .../45-libthai-data_0.1.28-3_all.deb ... Unpacking libthai-data (0.1.28-3) over (0.1.28-2) ... Preparing to unpack .../46-libthai0_0.1.28-3_amd64.deb ... Unpacking libthai0:amd64 (0.1.28-3) over (0.1.28-2) ... Preparing to unpack .../47-libpango-1.0-0_1.46.2-3_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.46.2-3) over (1.42.4-8~deb10u1) ... Preparing to unpack .../48-libpaper1_1.1.28+b1_amd64.deb ... Unpacking libpaper1:amd64 (1.1.28+b1) over (1.1.28) ... Preparing to unpack .../49-libpaper-utils_1.1.28+b1_amd64.deb ... Unpacking libpaper-utils (1.1.28+b1) over (1.1.28) ... Preparing to unpack .../50-libpixman-1-0_0.40.0-1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.40.0-1) over (0.36.0-1) ... Preparing to unpack .../51-libss2_1.45.6-1_amd64.deb ... Unpacking libss2:amd64 (1.45.6-1) over (1.44.5-1+deb10u3) ... Preparing to unpack .../52-libtcl8.6_8.6.10+dfsg-1_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.10+dfsg-1) over (8.6.9+dfsg-2) ... Preparing to unpack .../53-libwebp6_0.6.1-2+b1_amd64.deb ... Unpacking libwebp6:amd64 (0.6.1-2+b1) over (0.6.1-2) ... Preparing to unpack .../54-libtiff5_4.1.0+git191117-2_amd64.deb ... Unpacking libtiff5:amd64 (4.1.0+git191117-2) over (4.1.0+git191117-2~deb10u1) ... Preparing to unpack .../55-libx11-data_2%3a1.6.12-1_all.deb ... Unpacking libx11-data (2:1.6.12-1) over (2:1.6.7-1+deb10u1) ... Preparing to unpack .../56-libxcb1_1.14-2_amd64.deb ... Unpacking libxcb1:amd64 (1.14-2) over (1.13.1-2) ... Preparing to unpack .../57-libx11-6_2%3a1.6.12-1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.6.12-1) over (2:1.6.7-1+deb10u1) ... Preparing to unpack .../58-libtk8.6_8.6.10-1_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.10-1) over (8.6.9-2) ... Preparing to unpack .../59-libxcb-render0_1.14-2_amd64.deb ... Unpacking libxcb-render0:amd64 (1.14-2) over (1.13.1-2) ... Preparing to unpack .../60-libxcb-shm0_1.14-2_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.14-2) over (1.13.1-2) ... Preparing to unpack .../61-libxt6_1%3a1.2.0-1_amd64.deb ... Unpacking libxt6:amd64 (1:1.2.0-1) over (1:1.1.5-1+b3) ... Selecting previously unselected package r-bioc-biocgenerics. Preparing to unpack .../62-r-bioc-biocgenerics_0.36.0-1_all.deb ... Unpacking r-bioc-biocgenerics (0.36.0-1) ... Preparing to unpack .../63-r-bioc-mergeomics_1.18.0-1_all.deb ... Unpacking r-bioc-mergeomics (1.18.0-1) over (1.10.0-1) ... Preparing to unpack .../64-unzip_6.0-25_amd64.deb ... Unpacking unzip (6.0-25) over (6.0-23+deb10u1) ... Preparing to unpack .../65-xdg-utils_1.1.3-2_all.deb ... Unpacking xdg-utils (1.1.3-2) over (1.1.3-1+deb10u1) ... Preparing to unpack .../66-r-base-core_4.0.3-1_amd64.deb ... Unpacking r-base-core (4.0.3-1) over (3.5.2-1) ... Setting up libexpat1:amd64 (2.2.10-1) ... Setting up libgraphite2-3:amd64 (1.3.14-1) ... Setting up libpixman-1-0:amd64 (0.40.0-1) ... Setting up libkeyutils1:amd64 (1.6.1-2) ... Setting up libpsl5:amd64 (0.21.0-1.1) ... Setting up libxcb1:amd64 (1.14-2) ... Setting up libicu67:amd64 (67.1-4) ... Setting up libdatrie1:amd64 (0.2.12-3) ... Setting up libxcb-render0:amd64 (1.14-2) ... Setting up libglib2.0-0:amd64 (2.66.3-2) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1h-1) ... Setting up unzip (6.0-25) ... Setting up libbrotli1:amd64 (1.0.9-2+b2) ... Setting up x11-common (1:7.7+21) ... Installing new version of config file /etc/X11/Xsession ... Installing new version of config file /etc/X11/Xsession.d/20x11-common_process-args ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libnghttp2-14:amd64 (1.42.0-1) ... Setting up libxcb-shm0:amd64 (1.14-2) ... Setting up libcom-err2:amd64 (1.45.6-1) ... Setting up libgomp1:amd64 (10.2.0-19) ... Setting up libldap-common (2.4.56+dfsg-1) ... Installing new version of config file /etc/ldap/ldap.conf ... Setting up libkrb5support0:amd64 (1.18.3-4) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Setting up tzdata (2020d-1) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Dec 12 19:58:06 UTC 2020. Universal Time is now: Sat Dec 12 19:58:06 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libblas3:amd64 (3.9.0-3) ... Setting up libjpeg62-turbo:amd64 (1:2.0.5-1.1) ... Setting up libx11-data (2:1.6.12-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libfribidi0:amd64 (1.0.8-2) ... Setting up libquadmath0:amd64 (10.2.0-19) ... Setting up libpng16-16:amd64 (1.6.37-3) ... Setting up libss2:amd64 (1.45.6-1) ... Setting up libtcl8.6:amd64 (8.6.10+dfsg-1) ... Setting up libwebp6:amd64 (0.6.1-2+b1) ... Setting up fonts-dejavu-core (2.37-2) ... Installing new version of config file /etc/fonts/conf.avail/57-dejavu-sans-mono.conf ... Installing new version of config file /etc/fonts/conf.avail/57-dejavu-sans.conf ... Installing new version of config file /etc/fonts/conf.avail/57-dejavu-serif.conf ... Setting up libk5crypto3:amd64 (1.18.3-4) ... Setting up logsave (1.45.6-1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2) ... Setting up libgfortran5:amd64 (10.2.0-19) ... Setting up mount (2.36.1-2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libx11-6:amd64 (2:1.6.12-1) ... Setting up libthai-data (0.1.28-3) ... Setting up mawk (1.3.4.20200120-2) ... Setting up libkrb5-3:amd64 (1.18.3-4) ... Setting up libtiff5:amd64 (4.1.0+git191117-2) ... Setting up openssl (1.1.1h-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up readline-common (8.1~rc3-1) ... Setting up xdg-utils (1.1.3-2) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up liblapack3:amd64 (3.9.0-3) ... Setting up libreadline8:amd64 (8.1~rc3-1) ... Setting up libldap-2.4-2:amd64 (2.4.56+dfsg-1) ... Setting up e2fsprogs (1.45.6-1) ... Setting up libthai0:amd64 (0.1.28-3) ... Setting up ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 13 added, 15 removed; done. Setting up libfreetype6:amd64 (2.10.2+dfsg-4) ... Setting up libgssapi-krb5-2:amd64 (1.18.3-4) ... Setting up ucf (3.0043) ... Setting up libxt6:amd64 (1:1.2.0-1) ... Setting up libcurl4:amd64 (7.72.0-1) ... Setting up libharfbuzz0b:amd64 (2.6.7-1) ... Setting up libpaper1:amd64 (1.1.28+b1) ... Setting up fontconfig-config (2.13.1-4.2) ... Installing new version of config file /etc/fonts/fonts.conf ... Setting up libpaper-utils (1.1.28+b1) ... Setting up libfontconfig1:amd64 (2.13.1-4.2) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libtk8.6:amd64 (8.6.10-1) ... Setting up libpango-1.0-0:amd64 (1.46.2-3) ... Setting up libpangoft2-1.0-0:amd64 (1.46.2-3) ... Setting up libpangocairo-1.0-0:amd64 (1.46.2-3) ... Setting up r-base-core (4.0.3-1) ... Installing new version of config file /etc/R/Makeconf ... Installing new version of config file /etc/R/Renviron.site ... Replacing config file /etc/R/Renviron with new version Setting up r-bioc-biocgenerics (0.36.0-1) ... Setting up r-bioc-mergeomics (1.18.0-1) ... Processing triggers for libc-bin (2.31-5) ... Processing triggers for ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m46.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-yf', 'dist-upgrade'] 0m46.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m47.7s DUMP: bc3cf5de2335babb7b1121199f025fb8 - 0m47.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m47.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'show', '--no-all-versions', 'r-bioc-mergeomics'] 0m47.9s DUMP: Package: r-bioc-mergeomics Version: 1.18.0-1 Installed-Size: 8795 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12 Recommends: r-cran-runit, r-bioc-biocgenerics Description-en: Integrative network analysis of omics data The Mergeomics pipeline serves as a flexible framework for integrating multidimensional omics-disease associations, functional genomics, canonical pathways and gene-gene interaction networks to generate mechanistic hypotheses. It includes two main parts: 1) Marker set enrichment analysis (MSEA); 2) Weighted Key Driver Analysis (wKDA). Description-md5: d744e3c22ea2ecce9f31fb5a290ad6a6 Homepage: https://bioconductor.org/packages/Mergeomics/ Section: gnu-r Priority: optional Filename: pool/main/r/r-bioc-mergeomics/r-bioc-mergeomics_1.18.0-1_all.deb Size: 2725484 MD5sum: 2f542e52c4fab909bd91b47bdb93858e SHA256: 4b814987f809b8c37e96823bbfb65d9a53cd3ad1f03cf18db577a68b769f1ce5 0m47.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'show', '--no-all-versions', 'r-bioc-mergeomics'] 0m47.9s INFO: apt-cache knows about the following packages: r-bioc-mergeomics 0m47.9s INFO: Running scripts pre_install 0m47.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_database-server'] 0m47.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_database-server'] 0m47.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_exceptions'] 0m47.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_exceptions'] 0m47.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_extras'] 0m47.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_extras'] 0m47.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture'] 0m47.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture'] 0m47.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m47.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m47.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy'] 0m48.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release o=Debian,a=testing,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m48.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy'] 0m48.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy', 'r-bioc-mergeomics'] 0m48.0s DUMP: r-bioc-mergeomics: Installed: 1.18.0-1 Candidate: 1.18.0-1 Version table: *** 1.18.0-1 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 100 /var/lib/dpkg/status 0m48.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy', 'r-bioc-mergeomics'] 0m48.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-y', 'install', 'r-bioc-mergeomics'] 0m48.4s DUMP: Reading package lists... Building dependency tree... Reading state information... r-bioc-mergeomics is already the newest version (1.18.0-1). The following packages were automatically installed and are no longer required: libicu63 libreadline7 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-y', 'install', 'r-bioc-mergeomics'] 0m48.4s INFO: Running scripts post_install 0m48.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_install_exceptions'] 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_install_exceptions'] 0m48.4s INFO: Running scripts post_distupgrade 0m48.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m48.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_exceptions'] 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_exceptions'] 0m48.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m48.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m48.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_zz_backports'] 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_zz_backports'] 0m48.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m48.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m48.7s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpkv5lghox to sid 0m48.7s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m48.7s INFO: Running scripts pre_distupgrade 0m48.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m48.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m48.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_exceptions'] 0m48.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_exceptions'] 0m48.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m48.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m48.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m48.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m48.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m48.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m48.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'update'] 0m51.8s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [153 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [8544 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6427 kB] Fetched 15.1 MB in 2s (6244 kB/s) Reading package lists... 0m51.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'update'] 0m51.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-yf', 'dist-upgrade'] 0m56.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libicu63 libreadline7 Use 'sudo apt autoremove' to remove them. The following packages will be upgraded: apt bash gcc-10-base libapt-pkg6.0 libfreetype6 libgcc-s1 libgfortran5 libgnutls30 libgomp1 libicu63 libicu67 libquadmath0 libreadline8 libssh2-1 libssl1.1 libstdc++6 libsystemd0 libudev1 openssl readline-common 20 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 27.6 MB of archives. After this operation, 379 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bash amd64 5.1-1 [1416 kB] Get:2 http://deb.debian.org/debian sid/main amd64 gcc-10-base amd64 10.2.1-1 [201 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 10.2.1-1 [41.4 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 10.2.1-1 [145 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 10.2.1-1 [100 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 10.2.1-1 [727 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 10.2.1-1 [492 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 247.1-4 [374 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 247.1-4 [166 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libapt-pkg6.0 amd64 2.1.13 [995 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libgnutls30 amd64 3.7.0-3 [1347 kB] Get:12 http://deb.debian.org/debian sid/main amd64 apt amd64 2.1.13 [1470 kB] Get:13 http://deb.debian.org/debian sid/main amd64 readline-common all 8.1-1 [73.7 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libfreetype6 amd64 2.10.4+dfsg-1 [418 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libicu67 amd64 67.1-5 [8625 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libssh2-1 amd64 1.9.0-1 [156 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libssl1.1 amd64 1.1.1i-1 [1551 kB] Get:20 http://deb.debian.org/debian sid/main amd64 openssl amd64 1.1.1i-1 [849 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 27.6 MB in 0s (68.5 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../archives/bash_5.1-1_amd64.deb ... Unpacking bash (5.1-1) over (5.1~rc3-1) ... Setting up bash (5.1-1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../gcc-10-base_10.2.1-1_amd64.deb ... Unpacking gcc-10-base:amd64 (10.2.1-1) over (10.2.0-19) ... Setting up gcc-10-base:amd64 (10.2.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10.2.1-1_amd64.deb ... Unpacking libgcc-s1:amd64 (10.2.1-1) over (10.2.0-19) ... Setting up libgcc-s1:amd64 (10.2.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../libquadmath0_10.2.1-1_amd64.deb ... Unpacking libquadmath0:amd64 (10.2.1-1) over (10.2.0-19) ... Preparing to unpack .../libgomp1_10.2.1-1_amd64.deb ... Unpacking libgomp1:amd64 (10.2.1-1) over (10.2.0-19) ... Preparing to unpack .../libgfortran5_10.2.1-1_amd64.deb ... Unpacking libgfortran5:amd64 (10.2.1-1) over (10.2.0-19) ... Preparing to unpack .../libstdc++6_10.2.1-1_amd64.deb ... Unpacking libstdc++6:amd64 (10.2.1-1) over (10.2.0-19) ... Setting up libstdc++6:amd64 (10.2.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../libsystemd0_247.1-4_amd64.deb ... Unpacking libsystemd0:amd64 (247.1-4) over (247.1-3) ... Setting up libsystemd0:amd64 (247.1-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../libudev1_247.1-4_amd64.deb ... Unpacking libudev1:amd64 (247.1-4) over (247.1-3) ... Setting up libudev1:amd64 (247.1-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.1.13_amd64.deb ... Unpacking libapt-pkg6.0:amd64 (2.1.13) over (2.1.12) ... Setting up libapt-pkg6.0:amd64 (2.1.13) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.7.0-3_amd64.deb ... Unpacking libgnutls30:amd64 (3.7.0-3) over (3.6.15-4) ... Setting up libgnutls30:amd64 (3.7.0-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../archives/apt_2.1.13_amd64.deb ... Unpacking apt (2.1.13) over (2.1.12) ... Setting up apt (2.1.13) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Preparing to unpack .../0-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) over (8.1~rc3-1) ... Preparing to unpack .../1-libreadline8_8.1-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-1) over (8.1~rc3-1) ... Preparing to unpack .../2-libfreetype6_2.10.4+dfsg-1_amd64.deb ... Unpacking libfreetype6:amd64 (2.10.4+dfsg-1) over (2.10.2+dfsg-4) ... Preparing to unpack .../3-libicu63_63.2-3_amd64.deb ... Unpacking libicu63:amd64 (63.2-3) over (63.1-6+deb10u1) ... Preparing to unpack .../4-libicu67_67.1-5_amd64.deb ... Unpacking libicu67:amd64 (67.1-5) over (67.1-4) ... Preparing to unpack .../5-libssh2-1_1.9.0-1_amd64.deb ... Unpacking libssh2-1:amd64 (1.9.0-1) over (1.8.0-2.1) ... Preparing to unpack .../6-libssl1.1_1.1.1i-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1i-1) over (1.1.1h-1) ... Preparing to unpack .../7-openssl_1.1.1i-1_amd64.deb ... Unpacking openssl (1.1.1i-1) over (1.1.1h-1) ... Setting up libicu67:amd64 (67.1-5) ... Setting up libssl1.1:amd64 (1.1.1i-1) ... Setting up libgomp1:amd64 (10.2.1-1) ... Setting up libicu63:amd64 (63.2-3) ... Setting up libfreetype6:amd64 (2.10.4+dfsg-1) ... Setting up libquadmath0:amd64 (10.2.1-1) ... Setting up libgfortran5:amd64 (10.2.1-1) ... Setting up libssh2-1:amd64 (1.9.0-1) ... Setting up openssl (1.1.1i-1) ... Setting up readline-common (8.1-1) ... Setting up libreadline8:amd64 (8.1-1) ... Processing triggers for libc-bin (2.31-5) ... 0m56.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-yf', 'dist-upgrade'] 0m56.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m57.6s DUMP: 1a40de0ff945043697a8acdd85e226fa - 0m57.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m57.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'show', '--no-all-versions', 'r-bioc-mergeomics'] 0m57.8s DUMP: Package: r-bioc-mergeomics Version: 1.18.0-1 Installed-Size: 8795 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12 Recommends: r-cran-runit, r-bioc-biocgenerics Description-en: Integrative network analysis of omics data The Mergeomics pipeline serves as a flexible framework for integrating multidimensional omics-disease associations, functional genomics, canonical pathways and gene-gene interaction networks to generate mechanistic hypotheses. It includes two main parts: 1) Marker set enrichment analysis (MSEA); 2) Weighted Key Driver Analysis (wKDA). Description-md5: d744e3c22ea2ecce9f31fb5a290ad6a6 Homepage: https://bioconductor.org/packages/Mergeomics/ Section: gnu-r Priority: optional Filename: pool/main/r/r-bioc-mergeomics/r-bioc-mergeomics_1.18.0-1_all.deb Size: 2725484 MD5sum: 2f542e52c4fab909bd91b47bdb93858e SHA256: 4b814987f809b8c37e96823bbfb65d9a53cd3ad1f03cf18db577a68b769f1ce5 0m57.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'show', '--no-all-versions', 'r-bioc-mergeomics'] 0m57.8s INFO: apt-cache knows about the following packages: r-bioc-mergeomics 0m57.8s INFO: Running scripts pre_install 0m57.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_database-server'] 0m57.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_database-server'] 0m57.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_exceptions'] 0m57.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_exceptions'] 0m57.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_extras'] 0m57.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_extras'] 0m57.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture'] 0m57.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture'] 0m57.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m57.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m57.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy'] 0m57.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m57.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy'] 0m57.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy', 'r-bioc-mergeomics'] 0m57.9s DUMP: r-bioc-mergeomics: Installed: 1.18.0-1 Candidate: 1.18.0-1 Version table: *** 1.18.0-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m57.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy', 'r-bioc-mergeomics'] 0m57.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-y', 'install', 'r-bioc-mergeomics'] 0m58.3s DUMP: Reading package lists... Building dependency tree... Reading state information... r-bioc-mergeomics is already the newest version (1.18.0-1). The following packages were automatically installed and are no longer required: libicu63 libreadline7 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m58.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-y', 'install', 'r-bioc-mergeomics'] 0m58.3s INFO: Running scripts post_install 0m58.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_install_exceptions'] 0m58.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_install_exceptions'] 0m58.3s INFO: Running scripts post_distupgrade 0m58.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m58.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m58.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_exceptions'] 0m58.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_exceptions'] 0m58.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m58.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m58.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m58.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m58.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_zz_backports'] 0m58.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_distupgrade_zz_backports'] 0m58.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m58.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m58.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m59.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 0m59.1s INFO: Running scripts pre_install 0m59.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_database-server'] 0m59.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_database-server'] 0m59.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_exceptions'] 0m59.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_exceptions'] 0m59.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_extras'] 0m59.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_extras'] 0m59.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture'] 0m59.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture'] 0m59.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m59.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m59.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy'] 0m59.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m59.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy'] 0m59.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy', 'r-bioc-mergeomics'] 0m59.2s DUMP: r-bioc-mergeomics: Installed: 1.18.0-1 Candidate: 1.18.0-1 Version table: *** 1.18.0-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m59.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-cache', 'policy', 'r-bioc-mergeomics'] 0m59.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-y', 'install', 'r-bioc-mergeomics=1.18.0-1'] 0m59.6s DUMP: Reading package lists... Building dependency tree... Reading state information... r-bioc-mergeomics is already the newest version (1.18.0-1). The following packages were automatically installed and are no longer required: libicu63 libreadline7 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m59.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', '-y', 'install', 'r-bioc-mergeomics=1.18.0-1'] 0m59.6s INFO: Running scripts post_install 0m59.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_install_exceptions'] 0m59.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_install_exceptions'] 0m59.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 1m0.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 1m0.5s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', '-ac', '--ignore-obsolete'] 1m1.5s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', '-ac', '--ignore-obsolete'] 1m1.5s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m1.5s DUMP: 0.15.2 1m1.5s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m1.5s INFO: Running adequate version 0.15.2 now. 1m1.5s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'r-bioc-mergeomics'] 1m1.6s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'r-bioc-mergeomics'] 1m1.6s INFO: Running scripts pre_remove 1m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_exceptions'] 1m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/pre_remove_exceptions'] 1m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m3.1s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 2.1.13 install ok installed base-files base-files 11 install ok installed base-passwd base-passwd 3.5.48 install ok installed bash bash 5.1-1 install ok installed bsdutils bsdutils 1:2.36.1-2 install ok installed ca-certificates ca-certificates 20200601 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-5 install ok installed debconf debconf 1.5.74 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.20.5 install ok installed e2fsprogs e2fsprogs 1.45.6-1 install ok installed fdisk fdisk 2.36.1-2 install ok installed findutils findutils 4.7.0+git20201010-2 install ok installed fontconfig fontconfig 2.13.1-4.2 install ok installed fontconfig-config fontconfig-config 2.13.1-4.2 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-2 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.1-1 install ok installed gcc-8-base:amd64 gcc-8-base 8.4.0-5 install ok installed gpgv gpgv 2.2.20-1 install ok installed grep grep 3.6-1 install ok installed gzip gzip 1.10-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.59 install ok installed libacl1:amd64 libacl1 2.2.53-8 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.1.13 install ok installed libattr1:amd64 libattr1 1:2.4.48-5 install ok installed libaudit-common libaudit-common 1:2.8.5-3.1 install ok installed libaudit1:amd64 libaudit1 1:2.8.5-3.1+b1 install ok installed libblas3:amd64 libblas3 3.9.0-3 install ok installed libblkid1:amd64 libblkid1 2.36.1-2 install ok installed libbrotli1:amd64 libbrotli1 1.0.9-2+b2 install ok installed libbsd0:amd64 libbsd0 0.10.0-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-5 install ok installed libc6:amd64 libc6 2.31-5 install ok installed libcairo2:amd64 libcairo2 1.16.0-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcom-err2:amd64 libcom-err2 1.45.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.17-1 install ok installed libcurl4:amd64 libcurl4 7.72.0-1 install ok installed libdatrie1:amd64 libdatrie1 0.2.12-3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.6 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.255 install ok installed libexpat1:amd64 libexpat1 2.2.10-1 install ok installed libext2fs2:amd64 libext2fs2 1.45.6-1 install ok installed libfdisk1:amd64 libfdisk1 2.36.1-2 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libffi7:amd64 libffi7 3.3-5 install ok installed libfontconfig1:amd64 libfontconfig1 2.13.1-4.2 install ok installed libfreetype6:amd64 libfreetype6 2.10.4+dfsg-1 install ok installed libfribidi0:amd64 libfribidi0 1.0.8-2 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.1-1 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-2 install ok installed libgfortran5:amd64 libgfortran5 10.2.1-1 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.66.3-2 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1 install ok installed libgnutls30:amd64 libgnutls30 3.7.0-3 install ok installed libgomp1:amd64 libgomp1 10.2.1-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-4 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 2.6.7-1 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1 install ok installed libhogweed6:amd64 libhogweed6 3.6-2 install ok installed libice6:amd64 libice6 2:1.0.10-1 install ok installed libicu63:amd64 libicu63 63.2-3 install ok installed libicu67:amd64 libicu67 67.1-5 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-4 install ok installed libjbig0:amd64 libjbig0 2.1-3.1+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.0.5-1.1 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-4 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-4 install ok installed liblapack3:amd64 liblapack3 3.9.0-3 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.56+dfsg-1 install ok installed libldap-common libldap-common 2.4.56+dfsg-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.2-2 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+b1 install ok installed libmount1:amd64 libmount1 2.36.1-2 install ok installed libncursesw6:amd64 libncursesw6 6.2+20201114-1 install ok installed libnettle6:amd64 libnettle6 3.4.1-1 install ok installed libnettle8:amd64 libnettle8 3.6-2 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.42.0-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.21-2 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.46.2-3 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.46.2-3 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.46.2-3 install ok installed libpaper-utils libpaper-utils 1.1.28+b1 install ok installed libpaper1:amd64 libpaper1 1.1.28+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.35-2 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.40.0-1 install ok installed libpng16-16:amd64 libpng16-16 1.6.37-3 install ok installed libpsl5:amd64 libpsl5 0.21.0-1.1 install ok installed libquadmath0:amd64 libquadmath0 10.2.1-1 install ok installed libreadline7:amd64 libreadline7 7.0-5 install ok installed libreadline8:amd64 libreadline8 8.1-1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.27+dfsg-2 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.27+dfsg-2 install ok installed libseccomp2:amd64 libseccomp2 2.5.0-3+b1 install ok installed libselinux1:amd64 libselinux1 3.1-2+b2 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b2 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsm6:amd64 libsm6 2:1.2.3-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-2 install ok installed libss2:amd64 libss2 1.45.6-1 install ok installed libssh2-1:amd64 libssh2-1 1.9.0-1 install ok installed libssl1.1:amd64 libssl1.1 1.1.1i-1 install ok installed libstdc++6:amd64 libstdc++6 10.2.1-1 install ok installed libsystemd0:amd64 libsystemd0 247.1-4 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.10+dfsg-1 install ok installed libthai-data libthai-data 0.1.28-3 install ok installed libthai0:amd64 libthai0 0.1.28-3 install ok installed libtiff5:amd64 libtiff5 4.1.0+git191117-2 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-1 install ok installed libtk8.6:amd64 libtk8.6 8.6.10-1 install ok installed libudev1:amd64 libudev1 247.1-4 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-2 install ok installed libwebp6:amd64 libwebp6 0.6.1-2+b1 install ok installed libx11-6:amd64 libx11-6 2:1.6.12-1 install ok installed libx11-data libx11-data 2:1.6.12-1 install ok installed libxau6:amd64 libxau6 1:1.0.8-1+b2 install ok installed libxcb-render0:amd64 libxcb-render0 1.14-2 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.14-2 install ok installed libxcb1:amd64 libxcb1 1.14-2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.3-1+b2 install ok installed libxft2:amd64 libxft2 2.3.2-2 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1 install ok installed libxt6:amd64 libxt6 1:1.2.0-1 install ok installed libzstd1:amd64 libzstd1 1.4.5+dfsg-4 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.45.6-1 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36.1-2 install ok installed ncurses-base ncurses-base 6.2+20201114-1 install ok installed ncurses-bin ncurses-bin 6.2+20201114-1 install ok installed openssl openssl 1.1.1i-1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.32.0-5 install ok installed r-base-core r-base-core 4.0.3-1 install ok installed r-bioc-biocgenerics r-bioc-biocgenerics 0.36.0-1 install ok installed r-bioc-mergeomics r-bioc-mergeomics 1.18.0-1 install ok installed readline-common readline-common 8.1-1 install ok installed sed sed 4.7-1 install ok installed sensible-utils sensible-utils 0.0.12+nmu1 install ok installed sysvinit-utils sysvinit-utils 2.96-5 install ok installed tar tar 1.32+dfsg-1 install ok installed tzdata tzdata 2020d-1 install ok installed ucf ucf 3.0043 install ok installed unzip unzip 6.0-25 install ok installed util-linux util-linux 2.36.1-2 install ok installed x11-common x11-common 1:7.7+21 install ok installed xdg-utils xdg-utils 1.1.3-2 install ok installed zip zip 3.0-11+b1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2 1m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'remove', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu63:amd64', 'libicu67:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline7:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtk8.6:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'openssl', 'r-base-core', 'r-bioc-biocgenerics', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'r-bioc-mergeomics'] 1m4.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: ca-certificates fontconfig fontconfig-config fonts-dejavu-core libblas3 libbrotli1 libbsd0 libcairo2 libcurl4 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu63 libicu67 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.4-2 libldap-common libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 libreadline7 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libssh2-1 libssl1.1 libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1 libxss1 libxt6 openssl r-base-core r-bioc-biocgenerics r-bioc-mergeomics readline-common sensible-utils ucf unzip x11-common xdg-utils zip 0 upgraded, 0 newly installed, 79 to remove and 0 not upgraded. After this operation, 173 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9591 files and directories currently installed.) Removing r-bioc-mergeomics (1.18.0-1) ... Removing r-bioc-biocgenerics (0.36.0-1) ... Removing r-base-core (4.0.3-1) ... Removing ca-certificates (20200601) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libpangocairo-1.0-0:amd64 (1.46.2-3) ... Removing libpangoft2-1.0-0:amd64 (1.46.2-3) ... Removing libpango-1.0-0:amd64 (1.46.2-3) ... Removing fontconfig (2.13.1-4.2) ... Removing libtk8.6:amd64 (8.6.10-1) ... Removing libxft2:amd64 (2.3.2-2) ... Removing libcairo2:amd64 (1.16.0-4) ... Removing libfontconfig1:amd64 (2.13.1-4.2) ... Removing fontconfig-config (2.13.1-4.2) ... Removing fonts-dejavu-core (2.37-2) ... Removing liblapack3:amd64 (3.9.0-3) ... Removing libblas3:amd64 (3.9.0-3) ... Removing libharfbuzz0b:amd64 (2.6.7-1) ... Removing libfreetype6:amd64 (2.10.4+dfsg-1) ... Removing libcurl4:amd64 (7.72.0-1) ... Removing libbrotli1:amd64 (1.0.9-2+b2) ... Removing libxt6:amd64 (1:1.2.0-1) ... Removing libxss1:amd64 (1:1.2.3-1) ... Removing libxcb-shm0:amd64 (1.14-2) ... Removing libsm6:amd64 (2:1.2.3-1) ... Removing libice6:amd64 (2:1.0.10-1) ... Removing libthai0:amd64 (0.1.28-3) ... Removing libdatrie1:amd64 (0.2.12-3) ... Removing libexpat1:amd64 (2.2.10-1) ... Removing libfribidi0:amd64 (1.0.8-2) ... Removing libgfortran5:amd64 (10.2.1-1) ... Removing libglib2.0-0:amd64 (2.66.3-2) ... Removing libgomp1:amd64 (10.2.1-1) ... Removing libgraphite2-3:amd64 (1.3.14-1) ... Removing libgssapi-krb5-2:amd64 (1.18.3-4) ... Removing libicu63:amd64 (63.2-3) ... Removing libicu67:amd64 (67.1-5) ... Removing libtiff5:amd64 (4.1.0+git191117-2) ... Removing libjbig0:amd64 (2.1-3.1+b2) ... Removing libjpeg62-turbo:amd64 (1:2.0.5-1.1) ... Removing libkrb5-3:amd64 (1.18.3-4) ... Removing libk5crypto3:amd64 (1.18.3-4) ... Removing libkeyutils1:amd64 (1.6.1-2) ... Removing libkrb5support0:amd64 (1.18.3-4) ... Removing libldap-2.4-2:amd64 (2.4.56+dfsg-1) ... Removing libldap-common (2.4.56+dfsg-1) ... Removing libnghttp2-14:amd64 (1.42.0-1) ... Removing libpaper-utils (1.1.28+b1) ... Removing libpaper1:amd64 (1.1.28+b1) ... Removing libpixman-1-0:amd64 (0.40.0-1) ... Removing libpng16-16:amd64 (1.6.37-3) ... Removing libpsl5:amd64 (0.21.0-1.1) ... Removing libquadmath0:amd64 (10.2.1-1) ... Removing libreadline7:amd64 (7.0-5) ... Removing libreadline8:amd64 (8.1-1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.27+dfsg-2) ... Removing libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Removing libssh2-1:amd64 (1.9.0-1) ... Removing openssl (1.1.1i-1) ... Removing libssl1.1:amd64 (1.1.1i-1) ... Removing libtcl8.6:amd64 (8.6.10+dfsg-1) ... Removing libthai-data (0.1.28-3) ... Removing libwebp6:amd64 (0.6.1-2+b1) ... Removing libxcb-render0:amd64 (1.14-2) ... Removing libxext6:amd64 (2:1.3.3-1+b2) ... Removing libxrender1:amd64 (1:0.9.10-1) ... Removing readline-common (8.1-1) ... Removing ucf (3.0043) ... Removing sensible-utils (0.0.12+nmu1) ... Removing unzip (6.0-25) ... Removing x11-common (1:7.7+21) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing xdg-utils (1.1.3-2) ... Removing zip (3.0-11+b1) ... Removing libx11-6:amd64 (2:1.6.12-1) ... Removing libxcb1:amd64 (1.14-2) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.10.0-1) ... Removing libx11-data (2:1.6.12-1) ... Removing libxau6:amd64 (1:1.0.8-1+b2) ... Processing triggers for libc-bin (2.31-5) ... 1m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'remove', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu63:amd64', 'libicu67:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline7:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtk8.6:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'openssl', 'r-base-core', 'r-bioc-biocgenerics', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'r-bioc-mergeomics'] 1m4.5s INFO: Running scripts post_remove 1m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_remove_exceptions'] 1m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_remove_exceptions'] 1m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg', '--purge', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu63:amd64', 'libicu67:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline7:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtk8.6:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'openssl', 'r-base-core', 'r-bioc-biocgenerics', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip'] 1m5.1s DUMP: (Reading database ... 6755 files and directories currently installed.) Purging configuration files for ca-certificates (20200601) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for fontconfig (2.13.1-4.2) ... Purging configuration files for fontconfig-config (2.13.1-4.2) ... Purging configuration files for fonts-dejavu-core (2.37-2) ... dpkg: warning: while removing fonts-dejavu-core, directory '/usr/share/fonts/truetype/dejavu' not empty so not removed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.66.3-2) ... dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.18.3-4) ... dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu63 which isn't installed dpkg: warning: ignoring request to remove libicu67 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libldap-2.4-2 which isn't installed Purging configuration files for libldap-common (2.4.56+dfsg-1) ... dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpaper-utils which isn't installed Purging configuration files for libpaper1:amd64 (1.1.28+b1) ... dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libreadline7 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed Purging configuration files for libssl1.1:amd64 (1.1.1i-1) ... dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtiff5 which isn't installed dpkg: warning: ignoring request to remove libtk8.6 which isn't installed dpkg: warning: ignoring request to remove libwebp6 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxss1 which isn't installed dpkg: warning: ignoring request to remove libxt6 which isn't installed Purging configuration files for openssl (1.1.1i-1) ... Purging configuration files for r-base-core (4.0.3-1) ... dpkg: warning: ignoring request to remove r-bioc-biocgenerics which isn't installed Purging configuration files for readline-common (8.1-1) ... dpkg: warning: ignoring request to remove sensible-utils which isn't installed Purging configuration files for ucf (3.0043) ... Purging configuration files for unzip (6.0-25) ... Purging configuration files for x11-common (1:7.7+21) ... dpkg: warning: ignoring request to remove xdg-utils which isn't installed dpkg: warning: ignoring request to remove zip which isn't installed 1m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg', '--purge', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu63:amd64', 'libicu67:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline7:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtk8.6:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'openssl', 'r-base-core', 'r-bioc-biocgenerics', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip'] 1m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg', '--purge', 'r-bioc-mergeomics'] 1m5.1s DUMP: dpkg: warning: ignoring request to remove r-bioc-mergeomics which isn't installed 1m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg', '--purge', 'r-bioc-mergeomics'] 1m5.1s INFO: Running scripts post_purge 1m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_purge_exceptions'] 1m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_purge_exceptions'] 1m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg', '--purge', '--pending'] 1m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg', '--purge', '--pending'] 1m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg', '--remove', '--pending'] 1m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg', '--remove', '--pending'] 1m5.1s INFO: Running scripts post_test 1m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_test_exceptions'] 1m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'tmp/scripts/post_test_exceptions'] 1m5.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 1m5.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 1m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg-divert', '--list'] 1m5.4s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'dpkg-divert', '--list'] 1m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'clean'] 1m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkv5lghox', 'apt-get', 'clean'] 1m5.5s DEBUG: Recording chroot state 1m5.7s INFO: Warning: Package purging left files on system: /usr/local/share/fonts/ not owned /usr/local/share/fonts/.uuid not owned /usr/share/fonts/ owned by: fonts-dejavu-core /usr/share/fonts/.uuid not owned /usr/share/fonts/truetype/ owned by: fonts-dejavu-core /usr/share/fonts/truetype/.uuid not owned /usr/share/fonts/truetype/dejavu/ owned by: fonts-dejavu-core /usr/share/fonts/truetype/dejavu/.uuid not owned 1m5.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/shm'] 1m6.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/shm'] 1m6.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/console'] 1m6.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/console'] 1m6.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/ptmx'] 1m6.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/ptmx'] 1m6.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/pts'] 1m6.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/dev/pts'] 1m6.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/proc'] 1m6.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkv5lghox/proc'] 1m6.1s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 1m6.1s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpkv5lghox'] 1m6.1s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpkv5lghox 1m6.1s INFO: PASS: Upgrading between Debian distributions. 1m6.1s INFO: PASS: All tests. 1m6.1s INFO: piuparts run ends. ret=0 End: 2020-12-12 19:58:33 GMT