Start: 2025-01-27 01:24:13 GMT
[stable]
Package: rambo-k
Version: 1.21+dfsg-4
Installed-Size: 1383
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Architecture: all
Depends: libcommons-cli-java, python3:any, python3-sklearn
Description: Read Assignment Method Based On K-mers
Homepage: http://rambok.sourceforge.net/
Description-md5: a05ed8471b33e5174a52d89ac988bf09
Section: science
Priority: optional
Filename: pool/main/r/rambo-k/rambo-k_1.21+dfsg-4_all.deb
Size: 1168596
MD5sum: fcaac740448041622cc3a05fb220caa2
SHA256: f240a91bdd72d07e6e7634463e0cd333d0b60391b99c6a4e62dacd8eda6ebb5a
[testing]
Package: rambo-k
Version: 1.21+dfsg-5
Installed-Size: 1383
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Architecture: all
Depends: libcommons-cli-java, python3:any, python3-sklearn
Description: Read Assignment Method Based On K-mers
Homepage: http://rambok.sourceforge.net/
Description-md5: a05ed8471b33e5174a52d89ac988bf09
Section: science
Priority: optional
Filename: pool/main/r/rambo-k/rambo-k_1.21+dfsg-5_all.deb
Size: 1169004
MD5sum: 1eda701f6eede663e1fe84c8f9d6ea36
SHA256: dcd3dbe17ec0474bd376eab4b68b347f9f72c5a75e5246bb1f704a963f99c340
[sid]
Package: rambo-k
Version: 1.21+dfsg-5
Installed-Size: 1383
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Architecture: all
Depends: libcommons-cli-java, python3:any, python3-sklearn
Description: Read Assignment Method Based On K-mers
Homepage: http://rambok.sourceforge.net/
Description-md5: a05ed8471b33e5174a52d89ac988bf09
Section: science
Priority: optional
Filename: pool/main/r/rambo-k/rambo-k_1.21+dfsg-5_all.deb
Size: 1169004
MD5sum: 1eda701f6eede663e1fe84c8f9d6ea36
SHA256: dcd3dbe17ec0474bd376eab4b68b347f9f72c5a75e5246bb1f704a963f99c340
Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat --apt rambo-k=1.21+dfsg-5
0m0.0s INFO: ------------------------------------------------------------------------------
0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile.
0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ
0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong.
0m0.0s INFO: ------------------------------------------------------------------------------
0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up.
0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz -d stable -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat --apt rambo-k=1.21+dfsg-5
0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64
0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpds65yo0g
0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpds65yo0g
0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz']
0m0.7s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/bookworm-merged-usr_amd64.tar.gz']
0m0.7s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/proc']
0m0.7s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/proc']
0m0.7s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/pts']
0m0.8s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/pts']
0m0.8s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/ptmx']
0m0.8s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/ptmx']
0m0.8s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/console']
0m0.8s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/console']
0m0.8s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/shm']
0m0.8s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/shm']
0m0.8s DEBUG: sources.list:
deb http://deb.debian.org/debian/ bookworm main
0m0.8s DEBUG: Created policy-rc.d and chmodded it.
0m0.8s DEBUG: Created resolv.conf.
0m0.8s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpds65yo0g/tmp/scripts/
0m0.8s INFO: Running scripts post_chroot_unpack
0m0.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated']
0m0.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated']
0m0.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'update']
0m1.7s DUMP:
Hit:1 http://deb.debian.org/debian bookworm InRelease
Reading package lists...
0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'update']
0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-yf', 'dist-upgrade']
0m2.2s DUMP:
Reading package lists...
Building dependency tree...
Calculating upgrade...
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-yf', 'dist-upgrade']
0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'sh', '-c', 'apt-cache dumpavail | md5sum']
0m2.8s DUMP:
148e5e53bdc890e1f1a69323d75c2dbe -
0m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'sh', '-c', 'apt-cache dumpavail | md5sum']
0m2.8s INFO: Running scripts post_setup
0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_dummy_users']
0m3.5s DUMP:
useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999
useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999
useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999
useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999
useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999
useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999
useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999
useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999
useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999
useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999
useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999
0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_dummy_users']
0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_forbid_home']
0m3.5s DUMP:
Disabling /home
Adding 'local diversion of /home to /home.distrib'
0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_forbid_home']
0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_force-unsafe-io']
0m3.5s DUMP:
Enabling dpkg --force-unsafe-io.
Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib'
Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged'
'/bin/sync' -> 'true'
0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_force-unsafe-io']
0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_minimize']
0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_minimize']
0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_squeeze-backports']
0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_squeeze-backports']
0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_zz_backports']
0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_setup_zz_backports']
0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
0m3.5s DUMP:
install ok installed adduser adduser 3.134
install ok installed apt apt 2.6.1
install ok installed base-files base-files 12.4+deb12u9
install ok installed base-passwd base-passwd 3.6.1
install ok installed bash bash 5.2.15-2+b7
install ok installed bsdutils bsdutils 1:2.38.1-5+deb12u3
install ok installed coreutils coreutils 9.1-1
install ok installed dash dash 0.5.12-2
install ok installed debconf debconf 1.5.82
install ok installed debian-archive-keyring debian-archive-keyring 2023.3+deb12u1
install ok installed debianutils debianutils 5.7-0.5~deb12u1
install ok installed diffutils diffutils 1:3.8-4
install ok installed dpkg dpkg 1.21.22
install ok installed e2fsprogs e2fsprogs 1.47.0-2
install ok installed findutils findutils 4.9.0-4
install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14
install ok installed gpgv gpgv 2.2.40-1.1
install ok installed grep grep 3.8-5
install ok installed gzip gzip 1.12-1
install ok installed hostname hostname 3.23+nmu1
install ok installed init-system-helpers init-system-helpers 1.65.2
install ok installed libacl1:amd64 libacl1 2.3.1-3
install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.6.1
install ok installed libattr1:amd64 libattr1 1:2.5.1-4
install ok installed libaudit-common libaudit-common 1:3.0.9-1
install ok installed libaudit1:amd64 libaudit1 1:3.0.9-1
install ok installed libblkid1:amd64 libblkid1 2.38.1-5+deb12u3
install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1
install ok installed libc-bin libc-bin 2.36-9+deb12u9
install ok installed libc6:amd64 libc6 2.36-9+deb12u9
install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b3
install ok installed libcap2:amd64 libcap2 1:2.66-4
install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2
install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2
install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1
install ok installed libdebconfclient0:amd64 libdebconfclient0 0.270
install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2
install ok installed libffi8:amd64 libffi8 3.4.4-1
install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14
install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3
install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1
install ok installed libgnutls30:amd64 libgnutls30 3.7.9-2+deb12u3
install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1
install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2
install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1
install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1
install ok installed liblzma5:amd64 liblzma5 5.4.1-0.2
install ok installed libmd0:amd64 libmd0 1.0.4-2
install ok installed libmount1:amd64 libmount1 2.38.1-5+deb12u3
install ok installed libnettle8:amd64 libnettle8 3.8.1-2
install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2
install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6+deb12u1
install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6+deb12u1
install ok installed libpam-runtime libpam-runtime 1.5.2-6+deb12u1
install ok installed libpam0g:amd64 libpam0g 1.5.2-6+deb12u1
install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1
install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+deb12u1
install ok installed libselinux1:amd64 libselinux1 3.4-1+b6
install ok installed libsemanage-common libsemanage-common 3.4-1
install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b5
install ok installed libsepol2:amd64 libsepol2 3.4-2.1
install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-5+deb12u3
install ok installed libss2:amd64 libss2 1.47.0-2
install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14
install ok installed libsystemd0:amd64 libsystemd0 252.33-1~deb12u1
install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2
install ok installed libtinfo6:amd64 libtinfo6 6.4-4
install ok installed libudev1:amd64 libudev1 252.33-1~deb12u1
install ok installed libunistring2:amd64 libunistring2 1.0-2
install ok installed libuuid1:amd64 libuuid1 2.38.1-5+deb12u3
install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1
install ok installed libzstd1:amd64 libzstd1 1.5.4+dfsg2-5
install ok installed login login 1:4.13+dfsg1-1+b1
install ok installed logsave logsave 1.47.0-2
install ok installed mawk mawk 1.3.4.20200120-3.1
install ok installed mount mount 2.38.1-5+deb12u3
install ok installed ncurses-base ncurses-base 6.4-4
install ok installed ncurses-bin ncurses-bin 6.4-4
install ok installed passwd passwd 1:4.13+dfsg1-1+b1
install ok installed perl-base perl-base 5.36.0-7+deb12u1
install ok installed sed sed 4.9-1
install ok installed sysvinit-utils sysvinit-utils 3.06-4
install ok installed tar tar 1.34+dfsg-1.2+deb12u1
install ok installed tzdata tzdata 2024b-0+deb12u1
install ok installed usr-is-merged usr-is-merged 37~deb12u1
install ok installed util-linux util-linux 2.38.1-5+deb12u3
install ok installed util-linux-extra util-linux-extra 2.38.1-5+deb12u3
install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1
0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
0m3.5s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/stable22sid/reference-chroot-metadata.dat
0m3.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
0m4.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
0m4.0s INFO: Running scripts is_testable
0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/is_testable_uninstallable']
0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/is_testable_uninstallable']
0m4.0s INFO: Running scripts pre_test
0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_test_exceptions']
0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_test_exceptions']
0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_test_root_password']
0m4.1s DUMP:
New password: Retype new password: passwd: password updated successfully
0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_test_root_password']
0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'show', '--no-all-versions', 'rambo-k']
0m4.2s DUMP:
Package: rambo-k
Version: 1.21+dfsg-4
Installed-Size: 1383
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Architecture: all
Depends: libcommons-cli-java, python3:any, python3-sklearn
Description-en: Read Assignment Method Based On K-mers
RAMBO-K is a tool for rapid and sensitive removal of background sequences
from Next Generation Sequencing data.
.
RAMBO-K is a reference-based tool for rapid and sensitive extraction of
one organisms reads from a mixed dataset. It is based on a Markov chain
implementation, which uses genomic characteristics of each reference to
assign reads to the associated set.
Description-md5: a05ed8471b33e5174a52d89ac988bf09
Homepage: http://rambok.sourceforge.net/
Section: science
Priority: optional
Filename: pool/main/r/rambo-k/rambo-k_1.21+dfsg-4_all.deb
Size: 1168596
MD5sum: fcaac740448041622cc3a05fb220caa2
SHA256: f240a91bdd72d07e6e7634463e0cd333d0b60391b99c6a4e62dacd8eda6ebb5a
0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'show', '--no-all-versions', 'rambo-k']
0m4.2s INFO: apt-cache knows about the following packages: rambo-k
0m4.2s INFO: Running scripts pre_install
0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_database-server']
0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_database-server']
0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_exceptions']
0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_exceptions']
0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_extras']
0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_extras']
0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture']
0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture']
0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy']
0m4.4s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian bookworm/main amd64 Packages
release v=12.9,o=Debian,a=stable,n=bookworm,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy']
0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy', 'rambo-k']
0m4.4s DUMP:
rambo-k:
Installed: (none)
Candidate: 1.21+dfsg-4
Version table:
1.21+dfsg-4 500
500 http://deb.debian.org/debian bookworm/main amd64 Packages
0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy', 'rambo-k']
0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-y', 'install', 'rambo-k']
0m35.1s DUMP:
Reading package lists...
Building dependency tree...
The following additional packages will be installed:
binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-12 g++ g++-12 gcc
gcc-12 libasan8 libatomic1 libbinutils libblas3 libboost-dev
libboost1.74-dev libc-dev-bin libc6-dev libcc1-0 libcommons-cli-java
libcrypt-dev libctf-nobfd0 libctf0 libexpat1 libexpat1-dev libgcc-12-dev
libgfortran5 libgomp1 libgprofng0 libgssapi-krb5-2 libisl23 libitm1
libjansson4 libjs-jquery libjs-sphinxdoc libjs-underscore libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblsan0
libmpc3 libmpfr6 libncursesw6 libnsl-dev libnsl2 libopenblas-dev
libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libproc2-0
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libquadmath0
libreadline8 libsqlite3-0 libssl3 libstdc++-12-dev libtirpc-common
libtirpc-dev libtirpc3 libtsan2 libubsan1 libxsimd-dev linux-libc-dev
media-types procps python3 python3-all python3-all-dev python3-beniget
python3-decorator python3-dev python3-distutils python3-gast python3-joblib
python3-lib2to3 python3-minimal python3-numpy python3-pkg-resources
python3-ply python3-pythran python3-scipy python3-sklearn
python3-sklearn-lib python3-threadpoolctl python3.11 python3.11-dev
python3.11-minimal readline-common rpcsvc-proto zlib1g-dev
Suggested packages:
binutils-doc cpp-doc gcc-12-locales cpp-12-doc g++-multilib g++-12-multilib
gcc-12-doc gcc-multilib make manpages-dev autoconf automake libtool flex
bison gdb gcc-doc gcc-12-multilib libboost-doc libboost1.74-doc
libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev
libboost-context1.74-dev libboost-contract1.74-dev
libboost-coroutine1.74-dev libboost-date-time1.74-dev
libboost-exception1.74-dev libboost-fiber1.74-dev
libboost-filesystem1.74-dev libboost-graph1.74-dev
libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev
libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev
libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev
libboost-program-options1.74-dev libboost-python1.74-dev
libboost-random1.74-dev libboost-regex1.74-dev
libboost-serialization1.74-dev libboost-stacktrace1.74-dev
libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev
libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev
libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev
glibc-doc krb5-doc krb5-user libstdc++-12-doc libxsimd-doc python3-doc
python3-tk python3-venv gfortran python3-pytest python3-setuptools
python-ply-doc python-scipy-doc python3-dap python-sklearn-doc ipython3
python3.11-venv python3.11-doc binfmt-support readline-doc
Recommended packages:
manpages manpages-dev libc-devtools javascript-common krb5-locales libgpm2
psmisc python3-pytest python3-simplejson python3-psutil python3-pil
python3-nose python3-matplotlib ca-certificates
The following NEW packages will be installed:
binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-12 g++ g++-12 gcc
gcc-12 libasan8 libatomic1 libbinutils libblas3 libboost-dev
libboost1.74-dev libc-dev-bin libc6-dev libcc1-0 libcommons-cli-java
libcrypt-dev libctf-nobfd0 libctf0 libexpat1 libexpat1-dev libgcc-12-dev
libgfortran5 libgomp1 libgprofng0 libgssapi-krb5-2 libisl23 libitm1
libjansson4 libjs-jquery libjs-sphinxdoc libjs-underscore libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblsan0
libmpc3 libmpfr6 libncursesw6 libnsl-dev libnsl2 libopenblas-dev
libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libproc2-0
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libquadmath0
libreadline8 libsqlite3-0 libssl3 libstdc++-12-dev libtirpc-common
libtirpc-dev libtirpc3 libtsan2 libubsan1 libxsimd-dev linux-libc-dev
media-types procps python3 python3-all python3-all-dev python3-beniget
python3-decorator python3-dev python3-distutils python3-gast python3-joblib
python3-lib2to3 python3-minimal python3-numpy python3-pkg-resources
python3-ply python3-pythran python3-scipy python3-sklearn
python3-sklearn-lib python3-threadpoolctl python3.11 python3.11-dev
python3.11-minimal rambo-k readline-common rpcsvc-proto zlib1g-dev
0 upgraded, 99 newly installed, 0 to remove and 0 not upgraded.
Need to get 134 MB of archives.
After this operation, 716 MB of additional disk space will be used.
Get:1 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.15-1~deb12u1 [2025 kB]
Get:2 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6+deb12u5 [816 kB]
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Get:4 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6+deb12u5 [2067 kB]
Get:5 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB]
Get:6 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB]
Get:7 http://deb.debian.org/debian bookworm/main amd64 libncursesw6 amd64 6.4-4 [134 kB]
Get:8 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-2+deb12u2 [32.6 kB]
Get:9 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-2+deb12u2 [78.7 kB]
Get:10 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B]
Get:11 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-2+deb12u2 [332 kB]
Get:12 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-2+deb12u2 [135 kB]
Get:13 http://deb.debian.org/debian bookworm/main amd64 libtirpc-common all 1.3.3+ds-1 [14.0 kB]
Get:14 http://deb.debian.org/debian bookworm/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB]
Get:15 http://deb.debian.org/debian bookworm/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB]
Get:16 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB]
Get:17 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB]
Get:18 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.40.1-2+deb12u1 [839 kB]
Get:19 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6+deb12u5 [1797 kB]
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Get:24 http://deb.debian.org/debian bookworm/main amd64 procps amd64 2:4.0.2-3 [709 kB]
Get:25 http://deb.debian.org/debian bookworm/main amd64 binutils-common amd64 2.40-2 [2487 kB]
Get:26 http://deb.debian.org/debian bookworm/main amd64 libbinutils amd64 2.40-2 [572 kB]
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Get:31 http://deb.debian.org/debian bookworm/main amd64 binutils-x86-64-linux-gnu amd64 2.40-2 [2246 kB]
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Get:75 http://deb.debian.org/debian bookworm/main amd64 libpython3.11 amd64 3.11.2-6+deb12u5 [1988 kB]
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Get:91 http://deb.debian.org/debian bookworm/main amd64 python3-joblib all 1.2.0-4 [211 kB]
Get:92 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1+deb12u1 [4960 kB]
Get:93 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB]
Get:94 http://deb.debian.org/debian bookworm/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB]
Get:95 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.10.1-2 [15.2 MB]
Get:96 http://deb.debian.org/debian bookworm/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB]
Get:97 http://deb.debian.org/debian bookworm/main amd64 python3-sklearn-lib amd64 1.2.1+dfsg-1 [2567 kB]
Get:98 http://deb.debian.org/debian bookworm/main amd64 python3-sklearn all 1.2.1+dfsg-1 [2103 kB]
Get:99 http://deb.debian.org/debian bookworm/main amd64 rambo-k all 1.21+dfsg-4 [1169 kB]
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Setting up python3-pythran (0.11.0+ds-7) ...
Setting up python3-scipy (1.10.1-2) ...
Setting up python3-sklearn (1.2.1+dfsg-1) ...
Setting up rambo-k (1.21+dfsg-4) ...
Processing triggers for libc-bin (2.36-9+deb12u9) ...
0m35.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-y', 'install', 'rambo-k']
0m35.1s INFO: Running scripts post_install
0m35.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_install_exceptions']
0m35.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_install_exceptions']
0m35.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
0m38.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
0m38.9s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpds65yo0g to testing
0m38.9s DEBUG: sources.list:
deb http://deb.debian.org/debian/ trixie main
0m38.9s INFO: Running scripts pre_distupgrade
0m38.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_allow_unauthenticated']
0m38.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_allow_unauthenticated']
0m38.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_exceptions']
0m38.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_exceptions']
0m38.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386']
0m38.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386']
0m38.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_zz_database-server']
0m38.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_zz_database-server']
0m38.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_zz_upgrade_early']
0m38.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_zz_upgrade_early']
0m38.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'update']
0m45.0s DUMP:
Get:1 http://deb.debian.org/debian trixie InRelease [175 kB]
Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9402 kB]
Get:3 http://deb.debian.org/debian trixie/main Translation-en [6311 kB]
Fetched 15.9 MB in 5s (2942 kB/s)
Reading package lists...
0m45.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'update']
0m45.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-yf', 'dist-upgrade']
1m57.2s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages were automatically installed and are no longer required:
libboost-dev libboost1.83-dev libgssapi-krb5-2 libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libnsl-dev libnsl2 libopenblas-dev
libopenblas-pthread-dev libopenblas0 libpython3-all-dev libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
libpython3.12t64 libtirpc-common libtirpc-dev libtirpc3t64 libxsimd-dev
python3-all python3-all-dev python3-beniget python3-gast python3-lib2to3
python3-ply python3-pythran python3.11 python3.11-dev python3.11-minimal
python3.12 python3.12-dev python3.12-minimal xtl-dev
Use 'sudo apt autoremove' to remove them.
The following packages will be REMOVED:
libapt-pkg6.0 libboost1.74-dev libdb5.3 libext2fs2 libhogweed6 libnettle8
libreadline8 libssl3 libtirpc3 python3-distutils
The following NEW packages will be installed:
cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu g++-14
g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-14 gcc-14-base
gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu libapt-pkg6.0t64
libboost1.83-dev libbsd0 libdb5.3t64 libext2fs2t64 libgcc-14-dev
libhogweed6t64 libhwasan0 libnettle8t64 libpython3.12-dev
libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libpython3.13
libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libreadline8t64
libsframe1 libssl3t64 libstdc++-14-dev libtirpc3t64 libunistring5 login.defs
netbase openssl-provider-legacy python3-autocommand python3-inflect
python3-jaraco.context python3-jaraco.functools python3-jaraco.text
python3-more-itertools python3-setuptools python3-typeguard
python3-typing-extensions python3-zipp python3.12 python3.12-dev
python3.12-minimal python3.13 python3.13-dev python3.13-minimal sqv xtl-dev
The following packages will be upgraded:
adduser apt base-files base-passwd bash binutils binutils-common
binutils-x86-64-linux-gnu bsdutils coreutils cpp cpp-12 dash debconf
debian-archive-keyring debianutils diffutils dpkg e2fsprogs findutils g++
g++-12 gcc gcc-12 gcc-12-base gpgv grep gzip hostname init-system-helpers
libacl1 libasan8 libatomic1 libattr1 libaudit-common libaudit1 libbinutils
libblas3 libblkid1 libboost-dev libbz2-1.0 libc-bin libc-dev-bin libc6
libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcommons-cli-java
libcrypt-dev libcrypt1 libctf-nobfd0 libctf0 libdebconfclient0 libexpat1
libexpat1-dev libffi8 libgcc-12-dev libgcc-s1 libgcrypt20 libgfortran5
libgmp10 libgomp1 libgpg-error0 libgprofng0 libgssapi-krb5-2 libidn2-0
libisl23 libitm1 libjansson4 libjs-sphinxdoc libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblsan0 liblz4-1 liblzma5
libmd0 libmount1 libmpc3 libmpfr6 libncursesw6 libnsl-dev libnsl2
libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread
libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g
libpcre2-8-0 libproc2-0 libpython3-all-dev libpython3-dev libpython3-stdlib
libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage2
libsepol2 libsmartcols1 libsqlite3-0 libss2 libstdc++-12-dev libstdc++6
libsystemd0 libtasn1-6 libtinfo6 libtirpc-common libtirpc-dev libtsan2
libubsan1 libudev1 libuuid1 libxsimd-dev libxxhash0 libzstd1 linux-libc-dev
login logsave mawk media-types mount ncurses-base ncurses-bin passwd
perl-base procps python3 python3-all python3-all-dev python3-decorator
python3-dev python3-gast python3-joblib python3-lib2to3 python3-minimal
python3-numpy python3-pkg-resources python3-ply python3-pythran
python3-scipy python3-sklearn python3-sklearn-lib rambo-k readline-common
sed sysvinit-utils tar tzdata usr-is-merged util-linux util-linux-extra
zlib1g zlib1g-dev
163 upgraded, 54 newly installed, 10 to remove and 0 not upgraded.
Need to get 247 MB of archives.
After this operation, 466 MB of additional disk space will be used.
Get:1 http://deb.debian.org/debian trixie/main amd64 base-files amd64 13.6 [72.8 kB]
Get:2 http://deb.debian.org/debian trixie/main amd64 libnsl-dev amd64 1.3.0-3+b3 [67.5 kB]
Get:3 http://deb.debian.org/debian trixie/main amd64 libcrypt-dev amd64 1:4.4.38-1 [119 kB]
Get:4 http://deb.debian.org/debian trixie/main amd64 libc6-dev amd64 2.40-5 [1957 kB]
Get:5 http://deb.debian.org/debian trixie/main amd64 libc-dev-bin amd64 2.40-5 [52.4 kB]
Get:6 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get:7 http://deb.debian.org/debian trixie/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3+b1 [190 kB]
Get:8 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB]
Get:9 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB]
Get:10 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB]
Get:11 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB]
Get:12 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB]
Get:13 http://deb.debian.org/debian trixie/main amd64 libzstd1 amd64 1.5.6+dfsg-2 [300 kB]
Get:14 http://deb.debian.org/debian trixie/main amd64 libc6 amd64 2.40-5 [2810 kB]
Get:15 http://deb.debian.org/debian trixie/main amd64 libc-bin amd64 2.40-5 [627 kB]
Get:16 http://deb.debian.org/debian trixie/main amd64 openssl-provider-legacy amd64 3.4.0-2 [301 kB]
Get:17 http://deb.debian.org/debian trixie/main amd64 libssl3t64 amd64 3.4.0-2 [2302 kB]
Get:18 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB]
Get:19 http://deb.debian.org/debian trixie/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB]
Get:20 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB]
Get:21 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B]
Get:22 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB]
Get:23 http://deb.debian.org/debian trixie/main amd64 libcrypt1 amd64 1:4.4.38-1 [90.1 kB]
Get:24 http://deb.debian.org/debian trixie/main amd64 linux-libc-dev all 6.12.10-1 [2492 kB]
Get:25 http://deb.debian.org/debian trixie/main amd64 gcc-14-base amd64 14.2.0-12 [48.3 kB]
Get:26 http://deb.debian.org/debian trixie/main amd64 libgcc-s1 amd64 14.2.0-12 [72.7 kB]
Get:27 http://deb.debian.org/debian trixie/main amd64 debianutils amd64 5.21 [92.1 kB]
Get:28 http://deb.debian.org/debian trixie/main amd64 bash amd64 5.2.37-1 [1501 kB]
Get:29 http://deb.debian.org/debian trixie/main amd64 libcap2 amd64 1:2.66-5+b1 [27.8 kB]
Get:30 http://deb.debian.org/debian trixie/main amd64 libsystemd0 amd64 257.2-1 [449 kB]
Get:31 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.4-1 [106 kB]
Get:32 http://deb.debian.org/debian trixie/main amd64 libgmp10 amd64 2:6.3.0+dfsg-3 [560 kB]
Get:33 http://deb.debian.org/debian trixie/main amd64 coreutils amd64 9.5-1+b1 [2922 kB]
Get:34 http://deb.debian.org/debian trixie/main amd64 dash amd64 0.5.12-11 [95.5 kB]
Get:35 http://deb.debian.org/debian trixie/main amd64 diffutils amd64 1:3.10-2 [384 kB]
Get:36 http://deb.debian.org/debian trixie/main amd64 libstdc++6 amd64 14.2.0-12 [714 kB]
Get:37 http://deb.debian.org/debian trixie/main amd64 libnettle8t64 amd64 3.10-1+b1 [305 kB]
Get:38 http://deb.debian.org/debian trixie/main amd64 libhogweed6t64 amd64 3.10-1+b1 [335 kB]
Get:39 http://deb.debian.org/debian trixie/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB]
Get:40 http://deb.debian.org/debian trixie/main amd64 libxxhash0 amd64 0.8.2-2+b2 [26.6 kB]
Get:41 http://deb.debian.org/debian trixie/main amd64 liblz4-1 amd64 1.9.4-4 [60.1 kB]
Get:42 http://deb.debian.org/debian trixie/main amd64 liblzma5 amd64 5.6.3-1+b1 [272 kB]
Get:43 http://deb.debian.org/debian trixie/main amd64 libudev1 amd64 257.2-1 [148 kB]
Get:44 http://deb.debian.org/debian trixie/main amd64 sqv amd64 1.2.1-5 [615 kB]
Get:45 http://deb.debian.org/debian trixie/main amd64 libapt-pkg6.0t64 amd64 2.9.23 [1115 kB]
Get:46 http://deb.debian.org/debian trixie/main amd64 apt amd64 2.9.23 [1381 kB]
Get:47 http://deb.debian.org/debian trixie/main amd64 tar amd64 1.35+dfsg-3.1 [815 kB]
Get:48 http://deb.debian.org/debian trixie/main amd64 dpkg amd64 1.22.11 [1531 kB]
Get:49 http://deb.debian.org/debian trixie/main amd64 findutils amd64 4.10.0-3 [700 kB]
Get:50 http://deb.debian.org/debian trixie/main amd64 grep amd64 3.11-4 [431 kB]
Get:51 http://deb.debian.org/debian trixie/main amd64 gzip amd64 1.13-1 [138 kB]
Get:52 http://deb.debian.org/debian trixie/main amd64 hostname amd64 3.25 [11.0 kB]
Get:53 http://deb.debian.org/debian trixie/main amd64 login.defs all 1:4.16.0-7 [185 kB]
Get:54 http://deb.debian.org/debian trixie/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-9 [704 kB]
Get:55 http://deb.debian.org/debian trixie/main amd64 libaudit-common all 1:4.0.2-2 [12.7 kB]
Get:56 http://deb.debian.org/debian trixie/main amd64 libcap-ng0 amd64 0.8.5-4 [17.3 kB]
Get:57 http://deb.debian.org/debian trixie/main amd64 libaudit1 amd64 1:4.0.2-2+b1 [55.2 kB]
Get:58 http://deb.debian.org/debian trixie/main amd64 perl-base amd64 5.40.0-8 [1675 kB]
Get:59 http://deb.debian.org/debian trixie/main amd64 debconf all 1.5.89 [120 kB]
Get:60 http://deb.debian.org/debian trixie/main amd64 libpam0g amd64 1.5.3-7+b1 [68.3 kB]
Get:61 http://deb.debian.org/debian trixie/main amd64 libpcre2-8-0 amd64 10.44-5 [275 kB]
Get:62 http://deb.debian.org/debian trixie/main amd64 libselinux1 amd64 3.7-3+b1 [77.0 kB]
Get:63 http://deb.debian.org/debian trixie/main amd64 libpam-modules-bin amd64 1.5.3-7+b1 [54.1 kB]
Get:64 http://deb.debian.org/debian trixie/main amd64 libpam-modules amd64 1.5.3-7+b1 [267 kB]
Get:65 http://deb.debian.org/debian trixie/main amd64 libpam-runtime all 1.5.3-7 [140 kB]
Get:66 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.4-1 [88.4 kB]
Get:67 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5-2+b1 [136 kB]
Get:68 http://deb.debian.org/debian trixie/main amd64 libtinfo6 amd64 6.5-2+b1 [344 kB]
Get:69 http://deb.debian.org/debian trixie/main amd64 ncurses-bin amd64 6.5-2+b1 [434 kB]
Get:70 http://deb.debian.org/debian trixie/main amd64 sed amd64 4.9-2 [329 kB]
Get:71 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.4-1 [169 kB]
Get:72 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.4-1 [200 kB]
Get:73 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.4-1 [140 kB]
Get:74 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.4-1 [36.2 kB]
Get:75 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.4-1 [1213 kB]
Get:76 http://deb.debian.org/debian trixie/main amd64 util-linux-extra amd64 2.40.4-1 [265 kB]
Get:77 http://deb.debian.org/debian trixie/main amd64 libdebconfclient0 amd64 0.277 [10.4 kB]
Get:78 http://deb.debian.org/debian trixie/main amd64 base-passwd amd64 3.6.6 [53.1 kB]
Get:79 http://deb.debian.org/debian trixie/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB]
Get:80 http://deb.debian.org/debian trixie/main amd64 libbsd0 amd64 0.12.2-2 [131 kB]
Get:81 http://deb.debian.org/debian trixie/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB]
Get:82 http://deb.debian.org/debian trixie/main amd64 libattr1 amd64 1:2.5.2-2 [22.7 kB]
Get:83 http://deb.debian.org/debian trixie/main amd64 libsemanage-common all 3.7-2 [7108 B]
Get:84 http://deb.debian.org/debian trixie/main amd64 libsepol2 amd64 3.7-1 [293 kB]
Get:85 http://deb.debian.org/debian trixie/main amd64 libsemanage2 amd64 3.7-2+b1 [91.2 kB]
Get:86 http://deb.debian.org/debian trixie/main amd64 passwd amd64 1:4.16.0-7 [1233 kB]
Get:87 http://deb.debian.org/debian trixie/main amd64 adduser all 3.137 [140 kB]
Get:88 http://deb.debian.org/debian trixie/main amd64 debian-archive-keyring all 2023.4 [161 kB]
Get:89 http://deb.debian.org/debian trixie/main amd64 libseccomp2 amd64 2.5.5-2 [47.8 kB]
Get:90 http://deb.debian.org/debian trixie/main amd64 init-system-helpers all 1.68 [38.7 kB]
Get:91 http://deb.debian.org/debian trixie/main amd64 ncurses-base all 6.5-2 [270 kB]
Get:92 http://deb.debian.org/debian trixie/main amd64 sysvinit-utils amd64 3.13-1 [33.2 kB]
Get:93 http://deb.debian.org/debian trixie/main amd64 libgomp1 amd64 14.2.0-12 [137 kB]
Get:94 http://deb.debian.org/debian trixie/main amd64 libitm1 amd64 14.2.0-12 [25.9 kB]
Get:95 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14.2.0-12 [9300 B]
Get:96 http://deb.debian.org/debian trixie/main amd64 libasan8 amd64 14.2.0-12 [2727 kB]
Get:97 http://deb.debian.org/debian trixie/main amd64 liblsan0 amd64 14.2.0-12 [1205 kB]
Get:98 http://deb.debian.org/debian trixie/main amd64 libisl23 amd64 0.27-1 [659 kB]
Get:99 http://deb.debian.org/debian trixie/main amd64 libmpfr6 amd64 4.2.1-1+b2 [724 kB]
Get:100 http://deb.debian.org/debian trixie/main amd64 libmpc3 amd64 1.3.1-1+b3 [52.2 kB]
Get:101 http://deb.debian.org/debian trixie/main amd64 g++-12 amd64 12.4.0-4 [10.8 MB]
Get:102 http://deb.debian.org/debian trixie/main amd64 gcc-12 amd64 12.4.0-4 [19.6 MB]
Get:103 http://deb.debian.org/debian trixie/main amd64 cpp-12 amd64 12.4.0-4 [9885 kB]
Get:104 http://deb.debian.org/debian trixie/main amd64 libubsan1 amd64 14.2.0-12 [1075 kB]
Get:105 http://deb.debian.org/debian trixie/main amd64 libstdc++-12-dev amd64 12.4.0-4 [2082 kB]
Get:106 http://deb.debian.org/debian trixie/main amd64 libquadmath0 amd64 14.2.0-12 [145 kB]
Get:107 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-12 [836 kB]
Get:108 http://deb.debian.org/debian trixie/main amd64 libcc1-0 amd64 14.2.0-12 [42.8 kB]
Get:109 http://deb.debian.org/debian trixie/main amd64 libgcc-12-dev amd64 12.4.0-4 [2434 kB]
Get:110 http://deb.debian.org/debian trixie/main amd64 libtsan2 amd64 14.2.0-12 [2460 kB]
Get:111 http://deb.debian.org/debian trixie/main amd64 gcc-12-base amd64 12.4.0-4 [43.6 kB]
Get:112 http://deb.debian.org/debian trixie/main amd64 libgprofng0 amd64 2.43.50.20250108-1 [807 kB]
Get:113 http://deb.debian.org/debian trixie/main amd64 libctf0 amd64 2.43.50.20250108-1 [88.4 kB]
Get:114 http://deb.debian.org/debian trixie/main amd64 libctf-nobfd0 amd64 2.43.50.20250108-1 [155 kB]
Get:115 http://deb.debian.org/debian trixie/main amd64 binutils-x86-64-linux-gnu amd64 2.43.50.20250108-1 [2277 kB]
Get:116 http://deb.debian.org/debian trixie/main amd64 libbinutils amd64 2.43.50.20250108-1 [532 kB]
Get:117 http://deb.debian.org/debian trixie/main amd64 binutils amd64 2.43.50.20250108-1 [68.5 kB]
Get:118 http://deb.debian.org/debian trixie/main amd64 binutils-common amd64 2.43.50.20250108-1 [2628 kB]
Get:119 http://deb.debian.org/debian trixie/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB]
Get:120 http://deb.debian.org/debian trixie/main amd64 libsframe1 amd64 2.43.50.20250108-1 [77.7 kB]
Get:121 http://deb.debian.org/debian trixie/main amd64 libhwasan0 amd64 14.2.0-12 [1489 kB]
Get:122 http://deb.debian.org/debian trixie/main amd64 libgcc-14-dev amd64 14.2.0-12 [2673 kB]
Get:123 http://deb.debian.org/debian trixie/main amd64 libstdc++-14-dev amd64 14.2.0-12 [2372 kB]
Get:124 http://deb.debian.org/debian trixie/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B]
Get:125 http://deb.debian.org/debian trixie/main amd64 libboost1.83-dev amd64 1.83.0-4 [10.6 MB]
Get:126 http://deb.debian.org/debian trixie/main amd64 logsave amd64 1.47.2-1 [23.9 kB]
Get:127 http://deb.debian.org/debian trixie/main amd64 libext2fs2t64 amd64 1.47.2-1 [212 kB]
Get:128 http://deb.debian.org/debian trixie/main amd64 e2fsprogs amd64 1.47.2-1 [590 kB]
Get:129 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-6 [69.4 kB]
Get:130 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get:131 http://deb.debian.org/debian trixie/main amd64 libpython3.13-minimal amd64 3.13.1-3 [858 kB]
Get:132 http://deb.debian.org/debian trixie/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB]
Get:133 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get:134 http://deb.debian.org/debian trixie/main amd64 python3.13-minimal amd64 3.13.1-3 [2202 kB]
Get:135 http://deb.debian.org/debian trixie/main amd64 python3-all-dev amd64 3.13.1-2 [1076 B]
Get:136 http://deb.debian.org/debian trixie/main amd64 python3-all amd64 3.13.1-2 [1056 B]
Get:137 http://deb.debian.org/debian trixie/main amd64 libpython3-all-dev amd64 3.13.1-2 [1072 B]
Get:138 http://deb.debian.org/debian trixie/main amd64 libpython3-dev amd64 3.13.1-2 [10.2 kB]
Get:139 http://deb.debian.org/debian trixie/main amd64 python3-dev amd64 3.13.1-2 [26.1 kB]
Get:140 http://deb.debian.org/debian trixie/main amd64 python3-sklearn-lib amd64 1.4.2+dfsg-7 [6468 kB]
Get:141 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.14.1-3 [20.5 MB]
Get:142 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB]
Get:143 http://deb.debian.org/debian trixie/main amd64 python3-lib2to3 all 3.13.1-1 [77.1 kB]
Get:144 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.13.1-2 [27.0 kB]
Get:145 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.13.1-2 [28.0 kB]
Get:146 http://deb.debian.org/debian trixie/main amd64 libopenblas-pthread-dev amd64 0.3.28+ds-4 [4889 kB]
Get:147 http://deb.debian.org/debian trixie/main amd64 libopenblas0-pthread amd64 0.3.28+ds-4 [6992 kB]
Get:148 http://deb.debian.org/debian trixie/main amd64 libopenblas0 amd64 0.3.28+ds-4 [41.0 kB]
Get:149 http://deb.debian.org/debian trixie/main amd64 libopenblas-dev amd64 0.3.28+ds-4 [54.5 kB]
Get:150 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.0-4 [152 kB]
Get:151 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB]
Get:152 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get:153 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB]
Get:154 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get:155 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB]
Get:156 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB]
Get:157 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B]
Get:158 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get:159 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 75.6.0-1 [222 kB]
Get:160 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB]
Get:161 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB]
Get:162 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.8-5 [817 kB]
Get:163 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB]
Get:164 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB]
Get:165 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024b-6 [257 kB]
Get:166 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.6-1 [23.6 kB]
Get:167 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB]
Get:168 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.8-5 [1971 kB]
Get:169 http://deb.debian.org/debian trixie/main amd64 libpython3.12t64 amd64 3.12.8-5 [2150 kB]
Get:170 http://deb.debian.org/debian trixie/main amd64 libpython3.12-dev amd64 3.12.8-5 [5136 kB]
Get:171 http://deb.debian.org/debian trixie/main amd64 libpython3.13-stdlib amd64 3.13.1-3 [1973 kB]
Get:172 http://deb.debian.org/debian trixie/main amd64 libpython3.13 amd64 3.13.1-3 [2151 kB]
Get:173 http://deb.debian.org/debian trixie/main amd64 libpython3.13-dev amd64 3.13.1-3 [5013 kB]
Get:174 http://deb.debian.org/debian trixie/main amd64 python3.13 amd64 3.13.1-3 [740 kB]
Get:175 http://deb.debian.org/debian trixie/main amd64 python3.13-dev amd64 3.13.1-3 [507 kB]
Get:176 http://deb.debian.org/debian trixie/main amd64 libjs-sphinxdoc all 8.1.3-4 [30.4 kB]
Get:177 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.13.1-2 [9952 B]
Get:178 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.8-5 [2164 kB]
Get:179 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.8-5 [677 kB]
Get:180 http://deb.debian.org/debian trixie/main amd64 python3.12-dev amd64 3.12.8-5 [505 kB]
Get:181 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.4-1 [155 kB]
Get:182 http://deb.debian.org/debian trixie/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB]
Get:183 http://deb.debian.org/debian trixie/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB]
Get:184 http://deb.debian.org/debian trixie/main amd64 gpgv amd64 2.2.46-1+b1 [219 kB]
Get:185 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-1 [476 kB]
Get:186 http://deb.debian.org/debian trixie/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB]
Get:187 http://deb.debian.org/debian trixie/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB]
Get:188 http://deb.debian.org/debian trixie/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB]
Get:189 http://deb.debian.org/debian trixie/main amd64 usr-is-merged all 39+nmu2 [5936 B]
Get:190 http://deb.debian.org/debian trixie/main amd64 mawk amd64 1.3.4.20240905-1 [138 kB]
Get:191 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB]
Get:192 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-6 [879 kB]
Get:193 http://deb.debian.org/debian trixie/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-12 [11.0 MB]
Get:194 http://deb.debian.org/debian trixie/main amd64 g++ amd64 4:14.2.0-1 [1344 B]
Get:195 http://deb.debian.org/debian trixie/main amd64 gcc amd64 4:14.2.0-1 [5136 B]
Get:196 http://deb.debian.org/debian trixie/main amd64 cpp amd64 4:14.2.0-1 [1568 B]
Get:197 http://deb.debian.org/debian trixie/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1 [4840 B]
Get:198 http://deb.debian.org/debian trixie/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-12 [21.4 MB]
Get:199 http://deb.debian.org/debian trixie/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-12 [12.1 MB]
Get:200 http://deb.debian.org/debian trixie/main amd64 cpp-14 amd64 14.2.0-12 [1280 B]
Get:201 http://deb.debian.org/debian trixie/main amd64 gcc-14 amd64 14.2.0-12 [534 kB]
Get:202 http://deb.debian.org/debian trixie/main amd64 g++-14 amd64 14.2.0-12 [20.5 kB]
Get:203 http://deb.debian.org/debian trixie/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1 [1436 B]
Get:204 http://deb.debian.org/debian trixie/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1 [1200 B]
Get:205 http://deb.debian.org/debian trixie/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB]
Get:206 http://deb.debian.org/debian trixie/main amd64 libss2 amd64 1.47.2-1 [28.7 kB]
Get:207 http://deb.debian.org/debian trixie/main amd64 xtl-dev all 0.7.7-1 [90.3 kB]
Get:208 http://deb.debian.org/debian trixie/main amd64 libxsimd-dev amd64 13.1.0-1 [132 kB]
Get:209 http://deb.debian.org/debian trixie/main amd64 python3-gast all 0.6.0-1 [18.7 kB]
Get:210 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get:211 http://deb.debian.org/debian trixie/main amd64 python3-joblib all 1.3.2-6 [216 kB]
Get:212 http://deb.debian.org/debian trixie/main amd64 python3-ply all 3.11-7 [62.6 kB]
Get:213 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.21.0-1 [10.6 kB]
Get:214 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 75.6.0-1 [720 kB]
Get:215 http://deb.debian.org/debian trixie/main amd64 python3-pythran amd64 0.17.0+ds-1 [456 kB]
Get:216 http://deb.debian.org/debian trixie/main amd64 python3-sklearn all 1.4.2+dfsg-7 [2248 kB]
Get:217 http://deb.debian.org/debian trixie/main amd64 rambo-k all 1.21+dfsg-5 [1169 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up base-files (13.6) ...
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Updating /etc/profile to current default.
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Unpacking libtirpc-common (1.3.4+ds-1.3) over (1.3.3+ds-1) ...
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Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) over (1.3.3+ds-1) ...
dpkg: libtirpc3:amd64: dependency problems, but removing anyway as you requested:
libpython3.11-stdlib:amd64 depends on libtirpc3 (>= 1.0.2).
libnsl2:amd64 depends on libtirpc3 (>= 1.0.2).
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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ...
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dpkg: libssl3:amd64: dependency problems, but removing anyway as you requested:
libpython3.11-minimal:amd64 depends on libssl3 (>= 3.0.0).
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dpkg: libdb5.3:amd64: dependency problems, but removing anyway as you requested:
libpython3.11-stdlib:amd64 depends on libdb5.3.
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Setting up libgfortran5:amd64 (14.2.0-12) ...
Setting up libubsan1:amd64 (14.2.0-12) ...
Setting up mount (2.40.4-1) ...
Setting up libhwasan0:amd64 (14.2.0-12) ...
Setting up libcrypt-dev:amd64 (1:4.4.38-1) ...
Setting up libasan8:amd64 (14.2.0-12) ...
Setting up procps (2:4.0.4-6) ...
Installing new version of config file /etc/sysctl.d/README.sysctl ...
Setting up netbase (6.4) ...
Setting up mawk (1.3.4.20240905-1) ...
Setting up libkrb5-3:amd64 (1.21.3-3) ...
Setting up libtsan2:amd64 (14.2.0-12) ...
Setting up libbinutils:amd64 (2.43.50.20250108-1) ...
Setting up libisl23:amd64 (0.27-1) ...
Setting up libc-dev-bin (2.40-5) ...
Setting up readline-common (8.2-6) ...
Setting up libcc1-0:amd64 (14.2.0-12) ...
Setting up liblsan0:amd64 (14.2.0-12) ...
Setting up libitm1:amd64 (14.2.0-12) ...
Setting up libctf0:amd64 (2.43.50.20250108-1) ...
Setting up python3.12-minimal (3.12.8-5) ...
Setting up liblapack3:amd64 (3.12.0-4) ...
Setting up cpp-12 (12.4.0-4) ...
Setting up libopenblas0-pthread:amd64 (0.3.28+ds-4) ...
Setting up e2fsprogs (1.47.2-1) ...
Installing new version of config file /etc/cron.d/e2scrub_all ...
Installing new version of config file /etc/mke2fs.conf ...
Setting up libxsimd-dev:amd64 (13.1.0-1) ...
Setting up libgprofng0:amd64 (2.43.50.20250108-1) ...
Setting up libgcc-12-dev:amd64 (12.4.0-4) ...
Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ...
Setting up cpp-14-x86-64-linux-gnu (14.2.0-12) ...
Setting up cpp-14 (14.2.0-12) ...
Setting up libreadline8t64:amd64 (8.2-6) ...
Setting up libopenblas0:amd64 (0.3.28+ds-4) ...
Setting up libc6-dev:amd64 (2.40-5) ...
Setting up libgcc-14-dev:amd64 (14.2.0-12) ...
Setting up libstdc++-14-dev:amd64 (14.2.0-12) ...
Setting up libpython3.13-stdlib:amd64 (3.13.1-3) ...
Setting up libpython3-stdlib:amd64 (3.13.1-2) ...
Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ...
Setting up binutils-x86-64-linux-gnu (2.43.50.20250108-1) ...
Setting up libpython3.13:amd64 (3.13.1-3) ...
Setting up cpp-x86-64-linux-gnu (4:14.2.0-1) ...
Setting up libopenblas-pthread-dev:amd64 (0.3.28+ds-4) ...
Setting up libboost1.83-dev:amd64 (1.83.0-4) ...
Setting up libstdc++-12-dev:amd64 (12.4.0-4) ...
Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ...
Setting up python3.13 (3.13.1-3) ...
Setting up python3 (3.13.1-2) ...
Setting up binutils (2.43.50.20250108-1) ...
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up libopenblas-dev:amd64 (0.3.28+ds-4) ...
Setting up python3-decorator (5.1.1-5) ...
Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) ...
Setting up libexpat1-dev:amd64 (2.6.4-1) ...
Setting up gcc-12 (12.4.0-4) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ...
Setting up cpp (4:14.2.0-1) ...
Setting up libnsl2:amd64 (1.3.0-3+b3) ...
Setting up libboost-dev:amd64 (1.83.0.2+b2) ...
Setting up gcc-14-x86-64-linux-gnu (14.2.0-12) ...
Setting up python3-lib2to3 (3.13.1-1) ...
python3.13: can't get files for byte-compilation
Setting up g++-12 (12.4.0-4) ...
Setting up python3-more-itertools (10.6.0-1) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up libpython3.12-stdlib:amd64 (3.12.8-5) ...
Setting up gcc-x86-64-linux-gnu (4:14.2.0-1) ...
Setting up python3-jaraco.context (6.0.0-1) ...
Setting up python3-joblib (1.3.2-6) ...
Setting up python3.12 (3.12.8-5) ...
Setting up python3-ply (3.11-7) ...
Setting up python3-typeguard (4.4.1-1) ...
Setting up python3-gast (0.6.0-1) ...
Setting up python3-all (3.13.1-2) ...
Setting up gcc-14 (14.2.0-12) ...
Setting up libpython3.12t64:amd64 (3.12.8-5) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up libpython3.13-dev:amd64 (3.13.1-3) ...
Setting up g++-14-x86-64-linux-gnu (14.2.0-12) ...
Setting up libnsl-dev:amd64 (1.3.0-3+b3) ...
Setting up g++-x86-64-linux-gnu (4:14.2.0-1) ...
Setting up g++-14 (14.2.0-12) ...
Setting up python3-pkg-resources (75.6.0-1) ...
Setting up libpython3-dev:amd64 (3.13.1-2) ...
Setting up python3-setuptools (75.6.0-1) ...
Setting up python3.13-dev (3.13.1-3) ...
Setting up libpython3.12-dev:amd64 (3.12.8-5) ...
Setting up gcc (4:14.2.0-1) ...
Setting up libpython3-all-dev:amd64 (3.13.1-2) ...
Setting up python3-dev (3.13.1-2) ...
Setting up python3.12-dev (3.12.8-5) ...
Setting up python3-numpy (1:1.26.4+ds-12) ...
Setting up g++ (4:14.2.0-1) ...
Setting up python3-all-dev (3.13.1-2) ...
Setting up python3-scipy (1.14.1-3) ...
Setting up python3-sklearn-lib:amd64 (1.4.2+dfsg-7) ...
Setting up python3-sklearn (1.4.2+dfsg-7) ...
Setting up python3-pythran (0.17.0+ds-1) ...
Setting up rambo-k (1.21+dfsg-5) ...
Processing triggers for debianutils (5.21) ...
Processing triggers for libc-bin (2.40-5) ...
1m57.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-yf', 'dist-upgrade']
1m57.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'sh', '-c', 'apt-cache dumpavail | md5sum']
1m58.1s DUMP:
032848bd6bd0f93b82454820a23171ff -
1m58.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'sh', '-c', 'apt-cache dumpavail | md5sum']
1m58.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'show', '--no-all-versions', 'rambo-k']
1m58.7s DUMP:
Package: rambo-k
Version: 1.21+dfsg-5
Installed-Size: 1383
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Architecture: all
Depends: libcommons-cli-java, python3:any, python3-sklearn
Description-en: Read Assignment Method Based On K-mers
RAMBO-K is a tool for rapid and sensitive removal of background sequences
from Next Generation Sequencing data.
.
RAMBO-K is a reference-based tool for rapid and sensitive extraction of
one organisms reads from a mixed dataset. It is based on a Markov chain
implementation, which uses genomic characteristics of each reference to
assign reads to the associated set.
Description-md5: a05ed8471b33e5174a52d89ac988bf09
Homepage: http://rambok.sourceforge.net/
Section: science
Priority: optional
Filename: pool/main/r/rambo-k/rambo-k_1.21+dfsg-5_all.deb
Size: 1169004
MD5sum: 1eda701f6eede663e1fe84c8f9d6ea36
SHA256: dcd3dbe17ec0474bd376eab4b68b347f9f72c5a75e5246bb1f704a963f99c340
1m58.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'show', '--no-all-versions', 'rambo-k']
1m58.7s INFO: apt-cache knows about the following packages: rambo-k
1m58.7s INFO: Running scripts pre_install
1m58.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_database-server']
1m58.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_database-server']
1m58.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_exceptions']
1m58.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_exceptions']
1m58.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_extras']
1m58.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_extras']
1m58.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture']
1m58.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture']
1m58.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture_i386']
1m58.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture_i386']
1m58.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy']
1m58.8s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian trixie/main amd64 Packages
release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
1m58.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy']
1m58.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy', 'rambo-k']
1m58.8s DUMP:
rambo-k:
Installed: 1.21+dfsg-5
Candidate: 1.21+dfsg-5
Version table:
*** 1.21+dfsg-5 500
500 http://deb.debian.org/debian trixie/main amd64 Packages
100 /var/lib/dpkg/status
1m58.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy', 'rambo-k']
1m58.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-y', 'install', 'rambo-k']
1m59.3s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
rambo-k is already the newest version (1.21+dfsg-5).
The following packages were automatically installed and are no longer required:
libboost-dev libboost1.83-dev libgssapi-krb5-2 libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libnsl-dev libnsl2 libopenblas-dev
libopenblas-pthread-dev libopenblas0 libpython3-all-dev libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
libpython3.12t64 libtirpc-common libtirpc-dev libtirpc3t64 libxsimd-dev
python3-all python3-all-dev python3-beniget python3-gast python3-lib2to3
python3-ply python3-pythran python3.11 python3.11-dev python3.11-minimal
python3.12 python3.12-dev python3.12-minimal xtl-dev
Use 'sudo apt autoremove' to remove them.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1m59.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-y', 'install', 'rambo-k']
1m59.3s INFO: Running scripts post_install
1m59.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_install_exceptions']
1m59.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_install_exceptions']
1m59.3s INFO: Running scripts post_distupgrade
1m59.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_base_cleanup']
1m59.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_base_cleanup']
1m59.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_exceptions']
1m59.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_exceptions']
1m59.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_force-unsafe-io']
1m59.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_force-unsafe-io']
1m59.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_squeeze-backports']
1m59.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_squeeze-backports']
1m59.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_zz_backports']
1m59.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_zz_backports']
1m59.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m1.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m1.1s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpds65yo0g to sid
2m1.1s DEBUG: sources.list:
deb http://deb.debian.org/debian/ sid main
2m1.1s INFO: Running scripts pre_distupgrade
2m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_allow_unauthenticated']
2m1.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_allow_unauthenticated']
2m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_exceptions']
2m1.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_exceptions']
2m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386']
2m1.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386']
2m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_zz_database-server']
2m1.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_zz_database-server']
2m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_zz_upgrade_early']
2m1.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_distupgrade_zz_upgrade_early']
2m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'update']
2m4.0s DUMP:
Get:1 http://deb.debian.org/debian sid InRelease [205 kB]
Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.0 MB]
Get:3 http://deb.debian.org/debian sid/main Translation-en [7332 kB]
Fetched 17.6 MB in 2s (9142 kB/s)
Reading package lists...
2m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'update']
2m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-yf', 'dist-upgrade']
2m16.1s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages were automatically installed and are no longer required:
libboost-dev libboost1.83-dev libgssapi-krb5-2 libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libnsl-dev libnsl2 libopenblas-dev
libopenblas-pthread-dev libopenblas0 libpython3-all-dev libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
libpython3.12t64 libtirpc-common libtirpc-dev libtirpc3t64 libxsimd-dev
python3-all python3-all-dev python3-autocommand python3-beniget python3-gast
python3-inflect python3-jaraco.context python3-jaraco.functools
python3-jaraco.text python3-lib2to3 python3-more-itertools
python3-pkg-resources python3-ply python3-pythran python3-setuptools
python3-typeguard python3-typing-extensions python3-zipp python3.11
python3.11-dev python3.11-minimal python3.12 python3.12-dev
python3.12-minimal xtl-dev
Use 'sudo apt autoremove' to remove them.
The following NEW packages will be installed:
binutils-gold binutils-gold-x86-64-linux-gnu
The following packages will be upgraded:
apt binutils binutils-common binutils-x86-64-linux-gnu cpp-14
cpp-14-x86-64-linux-gnu dpkg g++-14 g++-14-x86-64-linux-gnu gcc-14
gcc-14-base gcc-14-x86-64-linux-gnu libapt-pkg6.0t64 libasan8 libatomic1
libbinutils libc-bin libc-dev-bin libc6 libc6-dev libcc1-0 libctf-nobfd0
libctf0 libgcc-14-dev libgcc-s1 libgfortran5 libgomp1 libgprofng0
libgssapi-krb5-2 libhwasan0 libitm1 libk5crypto3 libkrb5-3 libkrb5support0
liblsan0 liblz4-1 libproc2-0 libquadmath0 libsframe1 libstdc++-14-dev
libstdc++6 libsystemd0 libtsan2 libubsan1 libudev1 libxxhash0 linux-libc-dev
procps python3-numpy tzdata
50 upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
Need to get 87.1 MB of archives.
After this operation, 223 kB disk space will be freed.
Get:1 http://deb.debian.org/debian sid/main amd64 libc6-dev amd64 2.40-6 [1958 kB]
Get:2 http://deb.debian.org/debian sid/main amd64 libc-dev-bin amd64 2.40-6 [56.6 kB]
Get:3 http://deb.debian.org/debian sid/main amd64 linux-libc-dev all 6.12.11-1 [2494 kB]
Get:4 http://deb.debian.org/debian sid/main amd64 libcc1-0 amd64 14.2.0-14 [42.9 kB]
Get:5 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-14 [48.6 kB]
Get:6 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-14 [72.7 kB]
Get:7 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 14.2.0-14 [137 kB]
Get:8 http://deb.debian.org/debian sid/main amd64 libitm1 amd64 14.2.0-14 [25.9 kB]
Get:9 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 14.2.0-14 [9288 B]
Get:10 http://deb.debian.org/debian sid/main amd64 libasan8 amd64 14.2.0-14 [2728 kB]
Get:11 http://deb.debian.org/debian sid/main amd64 liblsan0 amd64 14.2.0-14 [1205 kB]
Get:12 http://deb.debian.org/debian sid/main amd64 libtsan2 amd64 14.2.0-14 [2460 kB]
Get:13 http://deb.debian.org/debian sid/main amd64 libubsan1 amd64 14.2.0-14 [1075 kB]
Get:14 http://deb.debian.org/debian sid/main amd64 libhwasan0 amd64 14.2.0-14 [1489 kB]
Get:15 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 14.2.0-14 [145 kB]
Get:16 http://deb.debian.org/debian sid/main amd64 gcc-14 amd64 14.2.0-14 [536 kB]
Get:17 http://deb.debian.org/debian sid/main amd64 g++-14 amd64 14.2.0-14 [21.5 kB]
Get:18 http://deb.debian.org/debian sid/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-14 [12.1 MB]
Get:19 http://deb.debian.org/debian sid/main amd64 libstdc++-14-dev amd64 14.2.0-14 [2373 kB]
Get:20 http://deb.debian.org/debian sid/main amd64 libgcc-14-dev amd64 14.2.0-14 [2675 kB]
Get:21 http://deb.debian.org/debian sid/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-14 [21.4 MB]
Get:22 http://deb.debian.org/debian sid/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-14 [11.0 MB]
Get:23 http://deb.debian.org/debian sid/main amd64 cpp-14 amd64 14.2.0-14 [1276 B]
Get:24 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14.2.0-14 [837 kB]
Get:25 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-14 [713 kB]
Get:26 http://deb.debian.org/debian sid/main amd64 libctf-nobfd0 amd64 2.43.90.20250122-2 [155 kB]
Get:27 http://deb.debian.org/debian sid/main amd64 libctf0 amd64 2.43.90.20250122-2 [88.5 kB]
Get:28 http://deb.debian.org/debian sid/main amd64 libsframe1 amd64 2.43.90.20250122-2 [77.9 kB]
Get:29 http://deb.debian.org/debian sid/main amd64 libgprofng0 amd64 2.43.90.20250122-2 [807 kB]
Get:30 http://deb.debian.org/debian sid/main amd64 libbinutils amd64 2.43.90.20250122-2 [534 kB]
Get:31 http://deb.debian.org/debian sid/main amd64 binutils-common amd64 2.43.90.20250122-2 [2533 kB]
Get:32 http://deb.debian.org/debian sid/main amd64 binutils-x86-64-linux-gnu amd64 2.43.90.20250122-2 [1020 kB]
Get:33 http://deb.debian.org/debian sid/main amd64 binutils amd64 2.43.90.20250122-2 [265 kB]
Get:34 http://deb.debian.org/debian sid/main amd64 binutils-gold-x86-64-linux-gnu amd64 2.43.90.20250121-2+b1 [1197 kB]
Get:35 http://deb.debian.org/debian sid/main amd64 binutils-gold amd64 2.43.90.20250121-2+b1 [67.6 kB]
Get:36 http://deb.debian.org/debian sid/main amd64 libc6 amd64 2.40-6 [2816 kB]
Get:37 http://deb.debian.org/debian sid/main amd64 libxxhash0 amd64 0.8.3-2 [27.1 kB]
Get:38 http://deb.debian.org/debian sid/main amd64 liblz4-1 amd64 1.10.0-3 [63.8 kB]
Get:39 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 257.2-3 [450 kB]
Get:40 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 257.2-3 [149 kB]
Get:41 http://deb.debian.org/debian sid/main amd64 libapt-pkg6.0t64 amd64 2.9.25 [1114 kB]
Get:42 http://deb.debian.org/debian sid/main amd64 dpkg amd64 1.22.14 [1537 kB]
Get:43 http://deb.debian.org/debian sid/main amd64 apt amd64 2.9.25 [1380 kB]
Get:44 http://deb.debian.org/debian sid/main amd64 libc-bin amd64 2.40-6 [631 kB]
Get:45 http://deb.debian.org/debian sid/main amd64 tzdata all 2025a-1 [259 kB]
Get:46 http://deb.debian.org/debian sid/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB]
Get:47 http://deb.debian.org/debian sid/main amd64 procps amd64 2:4.0.4-7 [878 kB]
Get:48 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.21.3-4 [138 kB]
Get:49 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.21.3-4 [326 kB]
Get:50 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.21.3-4 [32.8 kB]
Get:51 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.21.3-4 [80.9 kB]
Get:52 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:1.26.4+ds-13 [4736 kB]
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Local time is now: Mon Jan 27 01:26:26 UTC 2025.
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2m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-yf', 'dist-upgrade']
2m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'sh', '-c', 'apt-cache dumpavail | md5sum']
2m17.1s DUMP:
46031a6083fb7461afee5e16eee12d5b -
2m17.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'sh', '-c', 'apt-cache dumpavail | md5sum']
2m17.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'show', '--no-all-versions', 'rambo-k']
2m17.4s DUMP:
Package: rambo-k
Version: 1.21+dfsg-5
Installed-Size: 1383
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Architecture: all
Depends: libcommons-cli-java, python3:any, python3-sklearn
Description-en: Read Assignment Method Based On K-mers
RAMBO-K is a tool for rapid and sensitive removal of background sequences
from Next Generation Sequencing data.
.
RAMBO-K is a reference-based tool for rapid and sensitive extraction of
one organisms reads from a mixed dataset. It is based on a Markov chain
implementation, which uses genomic characteristics of each reference to
assign reads to the associated set.
Description-md5: a05ed8471b33e5174a52d89ac988bf09
Homepage: http://rambok.sourceforge.net/
Section: science
Priority: optional
Filename: pool/main/r/rambo-k/rambo-k_1.21+dfsg-5_all.deb
Size: 1169004
MD5sum: 1eda701f6eede663e1fe84c8f9d6ea36
SHA256: dcd3dbe17ec0474bd376eab4b68b347f9f72c5a75e5246bb1f704a963f99c340
2m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'show', '--no-all-versions', 'rambo-k']
2m17.4s INFO: apt-cache knows about the following packages: rambo-k
2m17.4s INFO: Running scripts pre_install
2m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_database-server']
2m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_database-server']
2m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_exceptions']
2m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_exceptions']
2m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_extras']
2m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_extras']
2m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture']
2m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture']
2m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture_i386']
2m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture_i386']
2m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy']
2m17.6s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian sid/main amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
2m17.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy']
2m17.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy', 'rambo-k']
2m17.6s DUMP:
rambo-k:
Installed: 1.21+dfsg-5
Candidate: 1.21+dfsg-5
Version table:
*** 1.21+dfsg-5 500
500 http://deb.debian.org/debian sid/main amd64 Packages
100 /var/lib/dpkg/status
2m17.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy', 'rambo-k']
2m17.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-y', 'install', 'rambo-k']
2m18.1s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
rambo-k is already the newest version (1.21+dfsg-5).
The following packages were automatically installed and are no longer required:
libboost-dev libboost1.83-dev libgssapi-krb5-2 libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libnsl-dev libnsl2 libopenblas-dev
libopenblas-pthread-dev libopenblas0 libpython3-all-dev libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
libpython3.12t64 libtirpc-common libtirpc-dev libtirpc3t64 libxsimd-dev
python3-all python3-all-dev python3-autocommand python3-beniget python3-gast
python3-inflect python3-jaraco.context python3-jaraco.functools
python3-jaraco.text python3-lib2to3 python3-more-itertools
python3-pkg-resources python3-ply python3-pythran python3-setuptools
python3-typeguard python3-typing-extensions python3-zipp python3.11
python3.11-dev python3.11-minimal python3.12 python3.12-dev
python3.12-minimal xtl-dev
Use 'sudo apt autoremove' to remove them.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
2m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-y', 'install', 'rambo-k']
2m18.1s INFO: Running scripts post_install
2m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_install_exceptions']
2m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_install_exceptions']
2m18.1s INFO: Running scripts post_distupgrade
2m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_base_cleanup']
2m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_base_cleanup']
2m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_exceptions']
2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_exceptions']
2m18.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_force-unsafe-io']
2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_force-unsafe-io']
2m18.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_squeeze-backports']
2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_squeeze-backports']
2m18.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_zz_backports']
2m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_distupgrade_zz_backports']
2m18.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m20.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m20.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m22.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m22.5s INFO: Running scripts pre_install
2m22.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_database-server']
2m22.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_database-server']
2m22.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_exceptions']
2m22.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_exceptions']
2m22.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_extras']
2m22.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_extras']
2m22.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture']
2m22.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture']
2m22.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture_i386']
2m22.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_install_foreign_architecture_i386']
2m22.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy']
2m22.6s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian sid/main amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
2m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy']
2m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy', 'rambo-k']
2m22.7s DUMP:
rambo-k:
Installed: 1.21+dfsg-5
Candidate: 1.21+dfsg-5
Version table:
*** 1.21+dfsg-5 500
500 http://deb.debian.org/debian sid/main amd64 Packages
100 /var/lib/dpkg/status
2m22.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-cache', 'policy', 'rambo-k']
2m22.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-y', 'install', 'rambo-k=1.21+dfsg-5']
2m23.4s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
rambo-k is already the newest version (1.21+dfsg-5).
The following packages were automatically installed and are no longer required:
libboost-dev libboost1.83-dev libgssapi-krb5-2 libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 libnsl-dev libnsl2 libopenblas-dev
libopenblas-pthread-dev libopenblas0 libpython3-all-dev libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
libpython3.12t64 libtirpc-common libtirpc-dev libtirpc3t64 libxsimd-dev
python3-all python3-all-dev python3-autocommand python3-beniget python3-gast
python3-inflect python3-jaraco.context python3-jaraco.functools
python3-jaraco.text python3-lib2to3 python3-more-itertools
python3-pkg-resources python3-ply python3-pythran python3-setuptools
python3-typeguard python3-typing-extensions python3-zipp python3.11
python3.11-dev python3.11-minimal python3.12 python3.12-dev
python3.12-minimal xtl-dev
Use 'sudo apt autoremove' to remove them.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
2m23.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', '-y', 'install', 'rambo-k=1.21+dfsg-5']
2m23.4s INFO: Running scripts post_install
2m23.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_install_exceptions']
2m23.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_install_exceptions']
2m24.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m26.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m28.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', '-ac', '--ignore-obsolete']
2m34.0s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', '-ac', '--ignore-obsolete']
2m34.0s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate']
2m34.0s DUMP:
0.15.6
2m34.0s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate']
2m34.0s INFO: Running adequate version 0.15.6 now.
2m34.0s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'rambo-k']
2m34.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'rambo-k']
2m34.1s INFO: Running scripts pre_remove
2m34.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_40_find_missing_md5sums']
2m34.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_40_find_missing_md5sums']
2m34.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles']
2m34.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles']
2m34.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_40_find_unowned_lib_links']
2m36.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_40_find_unowned_lib_links']
2m36.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_50_find_bad_permissions']
2m37.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_50_find_bad_permissions']
2m37.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_50_find_missing_copyright']
2m37.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_50_find_missing_copyright']
2m37.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_exceptions']
2m37.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/pre_remove_exceptions']
2m37.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
2m37.2s DUMP:
install ok installed adduser adduser 3.137
install ok installed apt apt 2.9.25
install ok installed base-files base-files 13.6
install ok installed base-passwd base-passwd 3.6.6
install ok installed bash bash 5.2.37-1
install ok installed binutils binutils 2.43.90.20250122-2
install ok installed binutils-common:amd64 binutils-common 2.43.90.20250122-2
install ok installed binutils-gold binutils-gold 2.43.90.20250121-2+b1
install ok installed binutils-gold-x86-64-linux-gnu binutils-gold-x86-64-linux-gnu 2.43.90.20250121-2+b1
install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.43.90.20250122-2
install ok installed bsdutils bsdutils 1:2.40.4-1
install ok installed coreutils coreutils 9.5-1+b1
install ok installed cpp cpp 4:14.2.0-1
install ok installed cpp-12 cpp-12 12.4.0-4
install ok installed cpp-14 cpp-14 14.2.0-14
install ok installed cpp-14-x86-64-linux-gnu cpp-14-x86-64-linux-gnu 14.2.0-14
install ok installed cpp-x86-64-linux-gnu cpp-x86-64-linux-gnu 4:14.2.0-1
install ok installed dash dash 0.5.12-11
install ok installed debconf debconf 1.5.89
install ok installed debian-archive-keyring debian-archive-keyring 2023.4
install ok installed debianutils debianutils 5.21
install ok installed diffutils diffutils 1:3.10-2
install ok installed dpkg dpkg 1.22.14
install ok installed e2fsprogs e2fsprogs 1.47.2-1
install ok installed findutils findutils 4.10.0-3
install ok installed g++ g++ 4:14.2.0-1
install ok installed g++-12 g++-12 12.4.0-4
install ok installed g++-14 g++-14 14.2.0-14
install ok installed g++-14-x86-64-linux-gnu g++-14-x86-64-linux-gnu 14.2.0-14
install ok installed g++-x86-64-linux-gnu g++-x86-64-linux-gnu 4:14.2.0-1
install ok installed gcc gcc 4:14.2.0-1
install ok installed gcc-12 gcc-12 12.4.0-4
install ok installed gcc-12-base:amd64 gcc-12-base 12.4.0-4
install ok installed gcc-14 gcc-14 14.2.0-14
install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-14
install ok installed gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu 14.2.0-14
install ok installed gcc-x86-64-linux-gnu gcc-x86-64-linux-gnu 4:14.2.0-1
install ok installed gpgv gpgv 2.2.46-1+b1
install ok installed grep grep 3.11-4
install ok installed gzip gzip 1.13-1
install ok installed hostname hostname 3.25
install ok installed init-system-helpers init-system-helpers 1.68
install ok installed libacl1:amd64 libacl1 2.3.2-2+b1
install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.25
install ok installed libasan8:amd64 libasan8 14.2.0-14
install ok installed libatomic1:amd64 libatomic1 14.2.0-14
install ok installed libattr1:amd64 libattr1 1:2.5.2-2
install ok installed libaudit-common libaudit-common 1:4.0.2-2
install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2+b1
install ok installed libbinutils:amd64 libbinutils 2.43.90.20250122-2
install ok installed libblas3:amd64 libblas3 3.12.0-4
install ok installed libblkid1:amd64 libblkid1 2.40.4-1
install ok installed libboost-dev:amd64 libboost-dev 1.83.0.2+b2
install ok installed libboost1.83-dev:amd64 libboost1.83-dev 1.83.0-4
install ok installed libbsd0:amd64 libbsd0 0.12.2-2
install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6
install ok installed libc-bin libc-bin 2.40-6
install ok installed libc-dev-bin libc-dev-bin 2.40-6
install ok installed libc6:amd64 libc6 2.40-6
install ok installed libc6-dev:amd64 libc6-dev 2.40-6
install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4
install ok installed libcap2:amd64 libcap2 1:2.66-5+b1
install ok installed libcc1-0:amd64 libcc1-0 14.2.0-14
install ok installed libcom-err2:amd64 libcom-err2 1.47.2-1
install ok installed libcommons-cli-java libcommons-cli-java 1.6.0-1
install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.38-1
install ok installed libcrypt1:amd64 libcrypt1 1:4.4.38-1
install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.43.90.20250122-2
install ok installed libctf0:amd64 libctf0 2.43.90.20250122-2
install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9
install ok installed libdebconfclient0:amd64 libdebconfclient0 0.277
install ok installed libexpat1:amd64 libexpat1 2.6.4-1
install ok installed libexpat1-dev:amd64 libexpat1-dev 2.6.4-1
install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2-1
install ok installed libffi8:amd64 libffi8 3.4.6-1
install ok installed libgcc-12-dev:amd64 libgcc-12-dev 12.4.0-4
install ok installed libgcc-14-dev:amd64 libgcc-14-dev 14.2.0-14
install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-14
install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-7
install ok installed libgfortran5:amd64 libgfortran5 14.2.0-14
install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3
install ok installed libgnutls30:amd64 libgnutls30 3.7.9-2+deb12u3
install ok installed libgomp1:amd64 libgomp1 14.2.0-14
install ok installed libgpg-error0:amd64 libgpg-error0 1.51-3
install ok installed libgprofng0:amd64 libgprofng0 2.43.90.20250122-2
install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-4
install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1
install ok installed libhwasan0:amd64 libhwasan0 14.2.0-14
install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1
install ok installed libisl23:amd64 libisl23 0.27-1
install ok installed libitm1:amd64 libitm1 14.2.0-14
install ok installed libjansson4:amd64 libjansson4 2.14-2+b3
install ok installed libjs-jquery libjs-jquery 3.6.1+dfsg+~3.5.14-1
install ok installed libjs-sphinxdoc libjs-sphinxdoc 8.1.3-4
install ok installed libjs-underscore libjs-underscore 1.13.4~dfsg+~1.11.4-3
install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-4
install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-4
install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-4
install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-4
install ok installed liblapack3:amd64 liblapack3 3.12.0-4
install ok installed liblbfgsb0:amd64 liblbfgsb0 3.0+dfsg.4-1+b2
install ok installed liblsan0:amd64 liblsan0 14.2.0-14
install ok installed liblz4-1:amd64 liblz4-1 1.10.0-3
install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1
install ok installed libmd0:amd64 libmd0 1.1.0-2+b1
install ok installed libmount1:amd64 libmount1 2.40.4-1
install ok installed libmpc3:amd64 libmpc3 1.3.1-1+b3
install ok installed libmpfr6:amd64 libmpfr6 4.2.1-1+b2
install ok installed libncursesw6:amd64 libncursesw6 6.5-2+b1
install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1
install ok installed libnsl-dev:amd64 libnsl-dev 1.3.0-3+b3
install ok installed libnsl2:amd64 libnsl2 1.3.0-3+b3
install ok installed libopenblas-dev:amd64 libopenblas-dev 0.3.28+ds-4
install ok installed libopenblas-pthread-dev:amd64 libopenblas-pthread-dev 0.3.28+ds-4
install ok installed libopenblas0:amd64 libopenblas0 0.3.28+ds-4
install ok installed libopenblas0-pthread:amd64 libopenblas0-pthread 0.3.28+ds-4
install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-3
install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1
install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1
install ok installed libpam-runtime libpam-runtime 1.5.3-7
install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1
install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.44-5
install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-7
install ok installed libpython3-all-dev:amd64 libpython3-all-dev 3.13.1-2
install ok installed libpython3-dev:amd64 libpython3-dev 3.13.1-2
install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.13.1-2
install ok installed libpython3.11:amd64 libpython3.11 3.11.2-6+deb12u5
install ok installed libpython3.11-dev:amd64 libpython3.11-dev 3.11.2-6+deb12u5
install ok installed libpython3.11-minimal:amd64 libpython3.11-minimal 3.11.2-6+deb12u5
install ok installed libpython3.11-stdlib:amd64 libpython3.11-stdlib 3.11.2-6+deb12u5
install ok installed libpython3.12-dev:amd64 libpython3.12-dev 3.12.8-5
install ok installed libpython3.12-minimal:amd64 libpython3.12-minimal 3.12.8-5
install ok installed libpython3.12-stdlib:amd64 libpython3.12-stdlib 3.12.8-5
install ok installed libpython3.12t64:amd64 libpython3.12t64 3.12.8-5
install ok installed libpython3.13:amd64 libpython3.13 3.13.1-3
install ok installed libpython3.13-dev:amd64 libpython3.13-dev 3.13.1-3
install ok installed libpython3.13-minimal:amd64 libpython3.13-minimal 3.13.1-3
install ok installed libpython3.13-stdlib:amd64 libpython3.13-stdlib 3.13.1-3
install ok installed libquadmath0:amd64 libquadmath0 14.2.0-14
install ok installed libreadline8t64:amd64 libreadline8t64 8.2-6
install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2
install ok installed libselinux1:amd64 libselinux1 3.7-3+b1
install ok installed libsemanage-common libsemanage-common 3.7-2
install ok installed libsemanage2:amd64 libsemanage2 3.7-2+b1
install ok installed libsepol2:amd64 libsepol2 3.7-1
install ok installed libsframe1:amd64 libsframe1 2.43.90.20250122-2
install ok installed libsmartcols1:amd64 libsmartcols1 2.40.4-1
install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-1
install ok installed libss2:amd64 libss2 1.47.2-1
install ok installed libssl3t64:amd64 libssl3t64 3.4.0-2
install ok installed libstdc++-12-dev:amd64 libstdc++-12-dev 12.4.0-4
install ok installed libstdc++-14-dev:amd64 libstdc++-14-dev 14.2.0-14
install ok installed libstdc++6:amd64 libstdc++6 14.2.0-14
install ok installed libsystemd0:amd64 libsystemd0 257.2-3
install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3
install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1
install ok installed libtirpc-common libtirpc-common 1.3.4+ds-1.3
install ok installed libtirpc-dev:amd64 libtirpc-dev 1.3.4+ds-1.3+b1
install ok installed libtirpc3t64:amd64 libtirpc3t64 1.3.4+ds-1.3+b1
install ok installed libtsan2:amd64 libtsan2 14.2.0-14
install ok installed libubsan1:amd64 libubsan1 14.2.0-14
install ok installed libudev1:amd64 libudev1 257.2-3
install ok installed libunistring2:amd64 libunistring2 1.0-2
install ok installed libunistring5:amd64 libunistring5 1.3-1
install ok installed libuuid1:amd64 libuuid1 2.40.4-1
install ok installed libxsimd-dev:amd64 libxsimd-dev 13.1.0-1
install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2
install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-2
install ok installed linux-libc-dev linux-libc-dev 6.12.11-1
install ok installed login login 1:4.16.0-2+really2.40.4-1
install ok installed login.defs login.defs 1:4.16.0-7
install ok installed logsave logsave 1.47.2-1
install ok installed mawk mawk 1.3.4.20240905-1
install ok installed media-types media-types 10.1.0
install ok installed mount mount 2.40.4-1
install ok installed ncurses-base ncurses-base 6.5-2
install ok installed ncurses-bin ncurses-bin 6.5-2+b1
install ok installed netbase netbase 6.4
install ok installed openssl-provider-legacy openssl-provider-legacy 3.4.0-2
install ok installed passwd passwd 1:4.16.0-7
install ok installed perl-base perl-base 5.40.0-8
install ok installed procps procps 2:4.0.4-7
install ok installed python3 python3 3.13.1-2
install ok installed python3-all python3-all 3.13.1-2
install ok installed python3-all-dev python3-all-dev 3.13.1-2
install ok installed python3-autocommand python3-autocommand 2.2.2-3
install ok installed python3-beniget python3-beniget 0.4.1-3
install ok installed python3-decorator python3-decorator 5.1.1-5
install ok installed python3-dev python3-dev 3.13.1-2
install ok installed python3-gast python3-gast 0.6.0-1
install ok installed python3-inflect python3-inflect 7.3.1-2
install ok installed python3-jaraco.context python3-jaraco.context 6.0.0-1
install ok installed python3-jaraco.functools python3-jaraco.functools 4.1.0-1
install ok installed python3-jaraco.text python3-jaraco.text 4.0.0-1
install ok installed python3-joblib python3-joblib 1.3.2-6
install ok installed python3-lib2to3 python3-lib2to3 3.13.1-1
install ok installed python3-minimal python3-minimal 3.13.1-2
install ok installed python3-more-itertools python3-more-itertools 10.6.0-1
install ok installed python3-numpy python3-numpy 1:1.26.4+ds-13
install ok installed python3-pkg-resources python3-pkg-resources 75.6.0-1
install ok installed python3-ply python3-ply 3.11-7
install ok installed python3-pythran python3-pythran 0.17.0+ds-1
install ok installed python3-scipy python3-scipy 1.14.1-3
install ok installed python3-setuptools python3-setuptools 75.6.0-1
install ok installed python3-sklearn python3-sklearn 1.4.2+dfsg-7
install ok installed python3-sklearn-lib:amd64 python3-sklearn-lib 1.4.2+dfsg-7
install ok installed python3-threadpoolctl python3-threadpoolctl 3.1.0-1
install ok installed python3-typeguard python3-typeguard 4.4.1-1
install ok installed python3-typing-extensions python3-typing-extensions 4.12.2-2
install ok installed python3-zipp python3-zipp 3.21.0-1
install ok installed python3.11 python3.11 3.11.2-6+deb12u5
install ok installed python3.11-dev python3.11-dev 3.11.2-6+deb12u5
install ok installed python3.11-minimal python3.11-minimal 3.11.2-6+deb12u5
install ok installed python3.12 python3.12 3.12.8-5
install ok installed python3.12-dev python3.12-dev 3.12.8-5
install ok installed python3.12-minimal python3.12-minimal 3.12.8-5
install ok installed python3.13 python3.13 3.13.1-3
install ok installed python3.13-dev python3.13-dev 3.13.1-3
install ok installed python3.13-minimal python3.13-minimal 3.13.1-3
install ok installed rambo-k rambo-k 1.21+dfsg-5
install ok installed readline-common readline-common 8.2-6
install ok installed rpcsvc-proto rpcsvc-proto 1.4.3-1
install ok installed sed sed 4.9-2
install ok installed sqv sqv 1.2.1-5
install ok installed sysvinit-utils sysvinit-utils 3.13-1
install ok installed tar tar 1.35+dfsg-3.1
install ok installed tzdata tzdata 2025a-1
install ok installed usr-is-merged usr-is-merged 39+nmu2
install ok installed util-linux util-linux 2.40.4-1
install ok installed util-linux-extra util-linux-extra 2.40.4-1
install ok installed xtl-dev xtl-dev 0.7.7-1
install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1
install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.3.dfsg+really1.3.1-1+b1
2m37.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
2m37.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-gold', 'binutils-gold-x86-64-linux-gnu', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'g++-', 'g++-12', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-12', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.83-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcommons-cli-java', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libhwasan0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblsan0:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libproc2-0:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-dev:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'libsframe1:amd64', 'libsqlite3-0:amd64', 'libstdc++-12-dev:amd64', 'libstdc++-14-dev:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'procps', 'python3', 'python3-all', 'python3-all-dev', 'python3-autocommand', 'python3-beniget', 'python3-decorator', 'python3-dev', 'python3-gast', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jaraco.text', 'python3-joblib', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-numpy', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3-setuptools', 'python3-sklearn', 'python3-sklearn-lib:amd64', 'python3-threadpoolctl', 'python3-typeguard', 'python3-typing-extensions', 'python3-zipp', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'python3.12', 'python3.12-dev', 'python3.12-minimal', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'readline-common', 'rpcsvc-proto', 'xtl-dev', 'zlib1g-dev:amd64', 'rambo-k']
2m42.9s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
binutils binutils-common binutils-gold binutils-gold-x86-64-linux-gnu
binutils-x86-64-linux-gnu cpp cpp-12 cpp-14 cpp-14-x86-64-linux-gnu
cpp-x86-64-linux-gnu g++ g++-12 g++-14 g++-14-x86-64-linux-gnu
g++-x86-64-linux-gnu gcc gcc-12 gcc-14 gcc-14-x86-64-linux-gnu
gcc-x86-64-linux-gnu libasan8 libatomic1 libbinutils libblas3 libboost-dev
libboost1.83-dev libc-dev-bin libc6-dev libcc1-0 libcommons-cli-java
libcrypt-dev libctf-nobfd0 libctf0 libexpat1 libexpat1-dev libgcc-12-dev
libgcc-14-dev libgfortran5 libgomp1 libgprofng0 libgssapi-krb5-2 libhwasan0
libisl23 libitm1 libjansson4 libjs-jquery libjs-sphinxdoc libjs-underscore
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0
liblsan0 libmpc3 libmpfr6 libncursesw6 libnsl-dev libnsl2 libopenblas-dev
libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libproc2-0
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib
libpython3.12t64 libpython3.13 libpython3.13-dev libpython3.13-minimal
libpython3.13-stdlib libquadmath0 libreadline8t64 libsframe1 libsqlite3-0
libstdc++-12-dev libstdc++-14-dev libtirpc-common libtirpc-dev libtirpc3t64
libtsan2 libubsan1 libxsimd-dev linux-libc-dev media-types netbase procps
python3 python3-all python3-all-dev python3-autocommand python3-beniget
python3-decorator python3-dev python3-gast python3-inflect
python3-jaraco.context python3-jaraco.functools python3-jaraco.text
python3-joblib python3-lib2to3 python3-minimal python3-more-itertools
python3-numpy python3-pkg-resources python3-ply python3-pythran
python3-scipy python3-setuptools python3-sklearn python3-sklearn-lib
python3-threadpoolctl python3-typeguard python3-typing-extensions
python3-zipp python3.11 python3.11-dev python3.11-minimal python3.12
python3.12-dev python3.12-minimal python3.13 python3.13-dev
python3.13-minimal rambo-k readline-common rpcsvc-proto xtl-dev zlib1g-dev
0 upgraded, 0 newly installed, 138 to remove and 0 not upgraded.
After this operation, 1166 MB disk space will be freed.
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(Reading database ... 38673 files and directories currently installed.)
Removing python3-pythran (0.17.0+ds-1) ...
Removing g++ (4:14.2.0-1) ...
Removing gcc (4:14.2.0-1) ...
Removing g++-12 (12.4.0-4) ...
Removing gcc-12 (12.4.0-4) ...
Removing g++-x86-64-linux-gnu (4:14.2.0-1) ...
Removing gcc-x86-64-linux-gnu (4:14.2.0-1) ...
Removing cpp (4:14.2.0-1) ...
Removing cpp-12 (12.4.0-4) ...
Removing cpp-x86-64-linux-gnu (4:14.2.0-1) ...
Removing g++-14 (14.2.0-14) ...
Removing g++-14-x86-64-linux-gnu (14.2.0-14) ...
Removing libboost-dev:amd64 (1.83.0.2+b2) ...
Removing libboost1.83-dev:amd64 (1.83.0-4) ...
Removing libstdc++-14-dev:amd64 (14.2.0-14) ...
Removing libstdc++-12-dev:amd64 (12.4.0-4) ...
Removing libgcc-12-dev:amd64 (12.4.0-4) ...
Removing rambo-k (1.21+dfsg-5) ...
Removing python3-sklearn (1.4.2+dfsg-7) ...
Removing python3-scipy (1.14.1-3) ...
Removing python3-sklearn-lib:amd64 (1.4.2+dfsg-7) ...
Removing python3-numpy (1:1.26.4+ds-13) ...
Removing liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ...
Removing liblapack3:amd64 (3.12.0-4) ...
Removing libblas3:amd64 (3.12.0-4) ...
Removing python3.11-dev (3.11.2-6+deb12u5) ...
Removing libpython3.11-dev:amd64 (3.11.2-6+deb12u5) ...
Removing python3-all-dev (3.13.1-2) ...
Removing python3-dev (3.13.1-2) ...
Removing python3.13-dev (3.13.1-3) ...
Removing python3.12-dev (3.12.8-5) ...
Removing libcommons-cli-java (1.6.0-1) ...
Removing python3.11 (3.11.2-6+deb12u5) ...
Removing python3.11-minimal (3.11.2-6+deb12u5) ...
Removing libpython3.11:amd64 (3.11.2-6+deb12u5) ...
Removing libopenblas-dev:amd64 (0.3.28+ds-4) ...
Removing libopenblas-pthread-dev:amd64 (0.3.28+ds-4) ...
Removing libopenblas0:amd64 (0.3.28+ds-4) ...
Removing libopenblas0-pthread:amd64 (0.3.28+ds-4) ...
Removing libgfortran5:amd64 (14.2.0-14) ...
Removing libnsl-dev:amd64 (1.3.0-3+b3) ...
Removing libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) ...
Removing libpython3.11-stdlib:amd64 (3.11.2-6+deb12u5) ...
Removing python3-all (3.13.1-2) ...
Removing python3.12 (3.12.8-5) ...
Removing libjs-sphinxdoc (8.1.3-4) ...
Removing libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Removing libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Removing python3-lib2to3 (3.13.1-1) ...
Removing python3-setuptools (75.6.0-1) ...
Removing python3-pkg-resources (75.6.0-1) ...
Removing python3-jaraco.text (4.0.0-1) ...
Removing python3-inflect (7.3.1-2) ...
Removing python3-typeguard (4.4.1-1) ...
Removing python3-joblib (1.3.2-6) ...
Removing procps (2:4.0.4-7) ...
Removing libproc2-0:amd64 (2:4.0.4-7) ...
Removing libpython3-all-dev:amd64 (3.13.1-2) ...
Removing libpython3-dev:amd64 (3.13.1-2) ...
Removing libpython3.11-minimal:amd64 (3.11.2-6+deb12u5) ...
Removing python3.12-minimal (3.12.8-5) ...
Removing libxsimd-dev:amd64 (13.1.0-1) ...
Removing python3-autocommand (2.2.2-3) ...
Removing python3-beniget (0.4.1-3) ...
Removing python3-decorator (5.1.1-5) ...
Removing python3-gast (0.6.0-1) ...
Removing python3-jaraco.context (6.0.0-1) ...
Removing python3-jaraco.functools (4.1.0-1) ...
Removing python3-more-itertools (10.6.0-1) ...
Removing python3-ply (3.11-7) ...
Removing python3-threadpoolctl (3.1.0-1) ...
Removing python3-typing-extensions (4.12.2-2) ...
Removing python3-zipp (3.21.0-1) ...
Removing xtl-dev (0.7.7-1) ...
Removing gcc-14 (14.2.0-14) ...
Removing binutils (2.43.90.20250122-2) ...
Removing libgprofng0:amd64 (2.43.90.20250122-2) ...
Removing gcc-14-x86-64-linux-gnu (14.2.0-14) ...
Removing binutils-x86-64-linux-gnu (2.43.90.20250122-2) ...
Removing libctf0:amd64 (2.43.90.20250122-2) ...
Removing libbinutils:amd64 (2.43.90.20250122-2) ...
Removing binutils-common:amd64 (2.43.90.20250122-2) ...
Removing binutils-gold (2.43.90.20250121-2+b1) ...
Removing binutils-gold-x86-64-linux-gnu (2.43.90.20250121-2+b1) ...
Removing cpp-14 (14.2.0-14) ...
Removing cpp-14-x86-64-linux-gnu (14.2.0-14) ...
Removing libgcc-14-dev:amd64 (14.2.0-14) ...
Removing libasan8:amd64 (14.2.0-14) ...
Removing libatomic1:amd64 (14.2.0-14) ...
Removing libpython3.13-dev:amd64 (3.13.1-3) ...
Removing libpython3.12-dev:amd64 (3.12.8-5) ...
Removing libexpat1-dev:amd64 (2.6.4-1) ...
Removing libcc1-0:amd64 (14.2.0-14) ...
Removing libctf-nobfd0:amd64 (2.43.90.20250122-2) ...
Removing libgomp1:amd64 (14.2.0-14) ...
Removing libhwasan0:amd64 (14.2.0-14) ...
Removing libisl23:amd64 (0.27-1) ...
Removing libitm1:amd64 (14.2.0-14) ...
Removing libjansson4:amd64 (2.14-2+b3) ...
Removing liblsan0:amd64 (14.2.0-14) ...
Removing libmpc3:amd64 (1.3.1-1+b3) ...
Removing libmpfr6:amd64 (4.2.1-1+b2) ...
Removing python3 (3.13.1-2) ...
Removing python3.13 (3.13.1-3) ...
Removing libpython3.13:amd64 (3.13.1-3) ...
Removing libpython3-stdlib:amd64 (3.13.1-2) ...
Removing libpython3.12t64:amd64 (3.12.8-5) ...
Removing python3-minimal (3.13.1-2) ...
Removing python3.13-minimal (3.13.1-3) ...
Removing libquadmath0:amd64 (14.2.0-14) ...
Removing libsframe1:amd64 (2.43.90.20250122-2) ...
Removing libtsan2:amd64 (14.2.0-14) ...
Removing libubsan1:amd64 (14.2.0-14) ...
Removing zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ...
Removing libc6-dev:amd64 (2.40-6) ...
Removing libc-dev-bin (2.40-6) ...
Removing libcrypt-dev:amd64 (1:4.4.38-1) ...
Removing libexpat1:amd64 (2.6.4-1) ...
Removing libpython3.12-stdlib:amd64 (3.12.8-5) ...
find: '/usr/lib/python3': No such file or directory
Removing libpython3.13-stdlib:amd64 (3.13.1-3) ...
find: '/usr/lib/python3': No such file or directory
Removing libncursesw6:amd64 (6.5-2+b1) ...
Removing libnsl2:amd64 (1.3.0-3+b3) ...
Removing libpython3.12-minimal:amd64 (3.12.8-5) ...
find: '/usr/lib/python3': No such file or directory
Removing libpython3.13-minimal:amd64 (3.13.1-3) ...
find: '/usr/lib/python3': No such file or directory
Removing libreadline8t64:amd64 (8.2-6) ...
Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Removing libsqlite3-0:amd64 (3.46.1-1) ...
Removing linux-libc-dev (6.12.11-1) ...
Removing media-types (10.1.0) ...
Removing netbase (6.4) ...
Removing readline-common (8.2-6) ...
Removing rpcsvc-proto (1.4.3-1) ...
Removing libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ...
Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
Removing libgssapi-krb5-2:amd64 (1.21.3-4) ...
Removing libkrb5-3:amd64 (1.21.3-4) ...
Removing libk5crypto3:amd64 (1.21.3-4) ...
Removing libkeyutils1:amd64 (1.6.3-4) ...
Removing libkrb5support0:amd64 (1.21.3-4) ...
Removing libtirpc-common (1.3.4+ds-1.3) ...
Processing triggers for libc-bin (2.40-6) ...
2m42.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-gold', 'binutils-gold-x86-64-linux-gnu', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'g++-', 'g++-12', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-12', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.83-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcommons-cli-java', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libhwasan0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblsan0:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libproc2-0:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-dev:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'libsframe1:amd64', 'libsqlite3-0:amd64', 'libstdc++-12-dev:amd64', 'libstdc++-14-dev:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'procps', 'python3', 'python3-all', 'python3-all-dev', 'python3-autocommand', 'python3-beniget', 'python3-decorator', 'python3-dev', 'python3-gast', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jaraco.text', 'python3-joblib', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-numpy', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3-setuptools', 'python3-sklearn', 'python3-sklearn-lib:amd64', 'python3-threadpoolctl', 'python3-typeguard', 'python3-typing-extensions', 'python3-zipp', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'python3.12', 'python3.12-dev', 'python3.12-minimal', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'readline-common', 'rpcsvc-proto', 'xtl-dev', 'zlib1g-dev:amd64', 'rambo-k']
2m42.9s INFO: Running scripts post_remove
2m42.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_remove_exceptions']
2m42.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_remove_exceptions']
2m42.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-gold', 'binutils-gold-x86-64-linux-gnu', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'g++', 'g++-12', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-12', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.83-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcommons-cli-java', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libhwasan0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblsan0:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libproc2-0:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-dev:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'libsframe1:amd64', 'libsqlite3-0:amd64', 'libstdc++-12-dev:amd64', 'libstdc++-14-dev:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'procps', 'python3', 'python3-all', 'python3-all-dev', 'python3-autocommand', 'python3-beniget', 'python3-decorator', 'python3-dev', 'python3-gast', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jaraco.text', 'python3-joblib', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-numpy', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3-setuptools', 'python3-sklearn', 'python3-sklearn-lib:amd64', 'python3-threadpoolctl', 'python3-typeguard', 'python3-typing-extensions', 'python3-zipp', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'python3.12', 'python3.12-dev', 'python3.12-minimal', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'readline-common', 'rpcsvc-proto', 'xtl-dev', 'zlib1g-dev:amd64']
2m43.1s DUMP:
(Reading database ... 5315 files and directories currently installed.)
Purging configuration files for binutils (2.43.90.20250122-2) ...
Purging configuration files for binutils-common:amd64 (2.43.90.20250122-2) ...
dpkg: warning: ignoring request to remove binutils-gold which isn't installed
dpkg: warning: ignoring request to remove binutils-gold-x86-64-linux-gnu which isn't installed
dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed
Purging configuration files for cpp (4:14.2.0-1) ...
dpkg: warning: ignoring request to remove cpp-12 which isn't installed
dpkg: warning: ignoring request to remove cpp-14 which isn't installed
dpkg: warning: ignoring request to remove cpp-14-x86-64-linux-gnu which isn't installed
dpkg: warning: ignoring request to remove cpp-x86-64-linux-gnu which isn't installed
dpkg: warning: ignoring request to remove g++ which isn't installed
dpkg: warning: ignoring request to remove g++-12 which isn't installed
dpkg: warning: ignoring request to remove g++-14 which isn't installed
dpkg: warning: ignoring request to remove g++-14-x86-64-linux-gnu which isn't installed
dpkg: warning: ignoring request to remove g++-x86-64-linux-gnu which isn't installed
dpkg: warning: ignoring request to remove gcc which isn't installed
dpkg: warning: ignoring request to remove gcc-12 which isn't installed
dpkg: warning: ignoring request to remove gcc-14 which isn't installed
dpkg: warning: ignoring request to remove gcc-14-x86-64-linux-gnu which isn't installed
dpkg: warning: ignoring request to remove gcc-x86-64-linux-gnu which isn't installed
dpkg: warning: ignoring request to remove libasan8 which isn't installed
dpkg: warning: ignoring request to remove libatomic1 which isn't installed
dpkg: warning: ignoring request to remove libbinutils which isn't installed
dpkg: warning: ignoring request to remove libblas3 which isn't installed
dpkg: warning: ignoring request to remove libboost-dev which isn't installed
dpkg: warning: ignoring request to remove libboost1.83-dev which isn't installed
dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed
dpkg: warning: ignoring request to remove libc6-dev which isn't installed
dpkg: warning: ignoring request to remove libcc1-0 which isn't installed
dpkg: warning: ignoring request to remove libcommons-cli-java which isn't installed
Purging configuration files for libcrypt-dev:amd64 (1:4.4.38-1) ...
dpkg: warning: ignoring request to remove libctf-nobfd0 which isn't installed
dpkg: warning: ignoring request to remove libctf0 which isn't installed
dpkg: warning: ignoring request to remove libexpat1 which isn't installed
dpkg: warning: ignoring request to remove libexpat1-dev which isn't installed
dpkg: warning: ignoring request to remove libgcc-12-dev which isn't installed
dpkg: warning: ignoring request to remove libgcc-14-dev which isn't installed
dpkg: warning: ignoring request to remove libgfortran5 which isn't installed
dpkg: warning: ignoring request to remove libgomp1 which isn't installed
dpkg: warning: ignoring request to remove libgprofng0 which isn't installed
Purging configuration files for libgssapi-krb5-2:amd64 (1.21.3-4) ...
dpkg: warning: ignoring request to remove libhwasan0 which isn't installed
dpkg: warning: ignoring request to remove libisl23 which isn't installed
dpkg: warning: ignoring request to remove libitm1 which isn't installed
dpkg: warning: ignoring request to remove libjansson4 which isn't installed
Purging configuration files for libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
dpkg: warning: ignoring request to remove libjs-sphinxdoc which isn't installed
dpkg: warning: ignoring request to remove libjs-underscore which isn't installed
dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed
dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed
dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed
dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed
dpkg: warning: ignoring request to remove liblapack3 which isn't installed
dpkg: warning: ignoring request to remove liblbfgsb0 which isn't installed
dpkg: warning: ignoring request to remove liblsan0 which isn't installed
dpkg: warning: ignoring request to remove libmpc3 which isn't installed
dpkg: warning: ignoring request to remove libmpfr6 which isn't installed
dpkg: warning: ignoring request to remove libncursesw6 which isn't installed
dpkg: warning: ignoring request to remove libnsl-dev which isn't installed
dpkg: warning: ignoring request to remove libnsl2 which isn't installed
dpkg: warning: ignoring request to remove libopenblas-dev which isn't installed
dpkg: warning: ignoring request to remove libopenblas-pthread-dev which isn't installed
dpkg: warning: ignoring request to remove libopenblas0 which isn't installed
dpkg: warning: ignoring request to remove libopenblas0-pthread which isn't installed
dpkg: warning: ignoring request to remove libproc2-0 which isn't installed
dpkg: warning: ignoring request to remove libpython3-all-dev which isn't installed
dpkg: warning: ignoring request to remove libpython3-dev which isn't installed
dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed
dpkg: warning: ignoring request to remove libpython3.11 which isn't installed
dpkg: warning: ignoring request to remove libpython3.11-dev which isn't installed
Purging configuration files for libpython3.11-minimal:amd64 (3.11.2-6+deb12u5) ...
dpkg: warning: ignoring request to remove libpython3.11-stdlib which isn't installed
dpkg: warning: ignoring request to remove libpython3.12-dev which isn't installed
Purging configuration files for libpython3.12-minimal:amd64 (3.12.8-5) ...
dpkg: warning: ignoring request to remove libpython3.12-stdlib which isn't installed
dpkg: warning: ignoring request to remove libpython3.12t64 which isn't installed
dpkg: warning: ignoring request to remove libpython3.13 which isn't installed
dpkg: warning: ignoring request to remove libpython3.13-dev which isn't installed
Purging configuration files for libpython3.13-minimal:amd64 (3.13.1-3) ...
dpkg: warning: ignoring request to remove libpython3.13-stdlib which isn't installed
dpkg: warning: ignoring request to remove libquadmath0 which isn't installed
Purging configuration files for libreadline8t64:amd64 (8.2-6) ...
dpkg: warning: ignoring request to remove libsframe1 which isn't installed
dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed
dpkg: warning: ignoring request to remove libstdc++-12-dev which isn't installed
dpkg: warning: ignoring request to remove libstdc++-14-dev which isn't installed
Purging configuration files for libtirpc-common (1.3.4+ds-1.3) ...
dpkg: warning: ignoring request to remove libtirpc-dev which isn't installed
Purging configuration files for libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ...
dpkg: warning: ignoring request to remove libtsan2 which isn't installed
dpkg: warning: ignoring request to remove libubsan1 which isn't installed
dpkg: warning: ignoring request to remove libxsimd-dev which isn't installed
dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed
Purging configuration files for media-types (10.1.0) ...
Purging configuration files for netbase (6.4) ...
Purging configuration files for procps (2:4.0.4-7) ...
dpkg: warning: while removing procps, directory '/etc/init.d' not empty so not removed
Purging configuration files for python3 (3.13.1-2) ...
dpkg: warning: ignoring request to remove python3-all which isn't installed
dpkg: warning: ignoring request to remove python3-all-dev which isn't installed
dpkg: warning: ignoring request to remove python3-autocommand which isn't installed
dpkg: warning: ignoring request to remove python3-beniget which isn't installed
dpkg: warning: ignoring request to remove python3-decorator which isn't installed
dpkg: warning: ignoring request to remove python3-dev which isn't installed
dpkg: warning: ignoring request to remove python3-gast which isn't installed
dpkg: warning: ignoring request to remove python3-inflect which isn't installed
dpkg: warning: ignoring request to remove python3-jaraco.context which isn't installed
dpkg: warning: ignoring request to remove python3-jaraco.functools which isn't installed
dpkg: warning: ignoring request to remove python3-jaraco.text which isn't installed
dpkg: warning: ignoring request to remove python3-joblib which isn't installed
dpkg: warning: ignoring request to remove python3-lib2to3 which isn't installed
dpkg: warning: ignoring request to remove python3-minimal which isn't installed
dpkg: warning: ignoring request to remove python3-more-itertools which isn't installed
dpkg: warning: ignoring request to remove python3-numpy which isn't installed
dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed
dpkg: warning: ignoring request to remove python3-ply which isn't installed
dpkg: warning: ignoring request to remove python3-pythran which isn't installed
dpkg: warning: ignoring request to remove python3-scipy which isn't installed
dpkg: warning: ignoring request to remove python3-setuptools which isn't installed
dpkg: warning: ignoring request to remove python3-sklearn which isn't installed
dpkg: warning: ignoring request to remove python3-sklearn-lib which isn't installed
dpkg: warning: ignoring request to remove python3-threadpoolctl which isn't installed
dpkg: warning: ignoring request to remove python3-typeguard which isn't installed
dpkg: warning: ignoring request to remove python3-typing-extensions which isn't installed
dpkg: warning: ignoring request to remove python3-zipp which isn't installed
dpkg: warning: ignoring request to remove python3.11 which isn't installed
dpkg: warning: ignoring request to remove python3.11-dev which isn't installed
Purging configuration files for python3.11-minimal (3.11.2-6+deb12u5) ...
dpkg: warning: ignoring request to remove python3.12 which isn't installed
dpkg: warning: ignoring request to remove python3.12-dev which isn't installed
Purging configuration files for python3.12-minimal (3.12.8-5) ...
dpkg: warning: ignoring request to remove python3.13 which isn't installed
dpkg: warning: ignoring request to remove python3.13-dev which isn't installed
Purging configuration files for python3.13-minimal (3.13.1-3) ...
Purging configuration files for readline-common (8.2-6) ...
dpkg: warning: ignoring request to remove rpcsvc-proto which isn't installed
dpkg: warning: ignoring request to remove xtl-dev which isn't installed
dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed
2m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-gold', 'binutils-gold-x86-64-linux-gnu', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'g++', 'g++-12', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-12', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.83-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcommons-cli-java', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libhwasan0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblsan0:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libproc2-0:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libpython3.12-dev:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libpython3.13:amd64', 'libpython3.13-dev:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8t64:amd64', 'libsframe1:amd64', 'libsqlite3-0:amd64', 'libstdc++-12-dev:amd64', 'libstdc++-14-dev:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev', 'media-types', 'netbase', 'procps', 'python3', 'python3-all', 'python3-all-dev', 'python3-autocommand', 'python3-beniget', 'python3-decorator', 'python3-dev', 'python3-gast', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jaraco.text', 'python3-joblib', 'python3-lib2to3', 'python3-minimal', 'python3-more-itertools', 'python3-numpy', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3-setuptools', 'python3-sklearn', 'python3-sklearn-lib:amd64', 'python3-threadpoolctl', 'python3-typeguard', 'python3-typing-extensions', 'python3-zipp', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'python3.12', 'python3.12-dev', 'python3.12-minimal', 'python3.13', 'python3.13-dev', 'python3.13-minimal', 'readline-common', 'rpcsvc-proto', 'xtl-dev', 'zlib1g-dev:amd64']
2m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg', '--purge', 'rambo-k']
2m43.1s DUMP:
dpkg: warning: ignoring request to remove rambo-k which isn't installed
2m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg', '--purge', 'rambo-k']
2m43.1s INFO: Running scripts post_purge
2m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_purge_exceptions']
2m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_purge_exceptions']
2m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg', '--purge', '--pending']
2m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg', '--purge', '--pending']
2m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg', '--remove', '--pending']
2m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg', '--remove', '--pending']
2m43.1s INFO: Running scripts post_test
2m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_test_exceptions']
2m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'tmp/scripts/post_test_exceptions']
2m43.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m43.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m43.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg-divert', '--list']
2m43.5s DUMP:
diversion of /sbin/mkfs.bfs to /sbin/mkfs.bfs.usr-is-merged by util-linux-extra
diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64
local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged
diversion of /sbin/mkfs.minix to /sbin/mkfs.minix.usr-is-merged by util-linux-extra
diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64
diversion of /sbin/mkfs.cramfs to /sbin/mkfs.cramfs.usr-is-merged by util-linux-extra
local diversion of /home to /home.distrib
diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6
diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64
diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64
diversion of /libx32 to /.libx32.usr-is-merged by base-files
local diversion of /usr/bin/sync to /usr/bin/sync.distrib
diversion of /sbin/ctrlaltdel to /sbin/ctrlaltdel.usr-is-merged by util-linux-extra
diversion of /sbin/fsck.minix to /sbin/fsck.minix.usr-is-merged by util-linux-extra
diversion of /lib32 to /.lib32.usr-is-merged by base-files
diversion of /libo32 to /.libo32.usr-is-merged by base-files
diversion of /sbin/fsck.cramfs to /sbin/fsck.cramfs.usr-is-merged by util-linux-extra
2m43.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'dpkg-divert', '--list']
2m43.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'clean']
2m43.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpds65yo0g', 'apt-get', 'clean']
2m43.5s DEBUG: Recording chroot state
2m44.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/shm']
2m44.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/shm']
2m44.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/console']
2m44.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/console']
2m44.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/ptmx']
2m44.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/ptmx']
2m44.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/pts']
2m44.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/dev/pts']
2m44.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/proc']
2m44.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpds65yo0g/proc']
2m44.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m44.5s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpds65yo0g']
2m44.5s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpds65yo0g
2m44.5s INFO: PASS: Upgrading between Debian distributions.
2m44.5s INFO: PASS: All tests.
2m44.5s INFO: piuparts run ends.
ret=0
End: 2025-01-27 01:26:58 GMT