Start: 2023-03-22 10:55:03 GMT Package: mobyle-programs Version: 5.1.2-1 Installed-Size: 4670 Maintainer: Debian Med Packaging Team Architecture: all Depends: mobyle (>= 1.5.1+dfsg) Recommends: emboss Breaks: mobyle-programs (<< 4.0-1) Description: Program descriptions for the mobyle portal Homepage: https://projets.pasteur.fr/projects/show/mobyle Description-md5: a09b1d72ee7d1f2f75ab553473791e18 Tag: devel::examples, field::biology:bioinformatics, role::examples Section: science Priority: optional Filename: pool/main/m/mobyle-programs/mobyle-programs_5.1.2-1_all.deb Size: 335778 MD5sum: 021de35123e299f9d5e491121acd4618 SHA256: 0d8678da11d8101ad57cae9a7d816af3a6db6b147e5b5a7aededb8c89bed1002 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch --no-upgrade-test --apt mobyle-programs=5.1.2-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch --no-upgrade-test --apt mobyle-programs=5.1.2-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpquqjtnfp 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpquqjtnfp 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/proc'] 0m1.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/proc'] 0m1.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/pts'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/pts'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/ptmx'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/ptmx'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/console'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/console'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/shm'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/shm'] 0m1.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main 0m1.4s DEBUG: Created policy-rc.d and chmodded it. 0m1.4s DEBUG: Created resolv.conf. 0m1.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpquqjtnfp/tmp/scripts/ 0m1.4s INFO: Running scripts post_chroot_unpack 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', 'update'] 0m2.5s DUMP: Ign:1 http://deb.debian.org/debian stretch InRelease Hit:2 http://deb.debian.org/debian stretch Release Reading package lists... 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', 'update'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', '-yf', 'dist-upgrade'] 0m2.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', '-yf', 'dist-upgrade'] 0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.2s DUMP: 660e5103244a20b75ca08c3f8741e16e - 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.2s INFO: Running scripts post_setup 0m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_dummy_users'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_dummy_users'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_forbid_home'] 0m3.9s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_forbid_home'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.9s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' '/bin/sync' -> 'true' 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_minimize'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_minimize'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_zz_backports'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_setup_zz_backports'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', 'clean'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', 'clean'] 0m4.0s DEBUG: Recording chroot state 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.4s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.10 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u1 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.25 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u1 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u1 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+b1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.10 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+b1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+b1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u12 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u12 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed login login 1:4.4-4.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed passwd passwd 1:4.4-4.1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg-divert', '--list'] 0m4.4s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg-divert', '--list'] 0m4.4s INFO: Running scripts is_testable 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/is_testable_uninstallable'] 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/is_testable_uninstallable'] 0m4.4s INFO: apt-cache does not know about any of the requested packages 0m4.4s INFO: Running scripts pre_test 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_test_exceptions'] 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_test_exceptions'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_test_root_password'] 0m4.4s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_test_root_password'] 0m4.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 0m4.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 0m5.0s DEBUG: No broken symlinks as far as we can find. 0m5.0s INFO: Running scripts pre_install 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_database-server'] 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_database-server'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_exceptions'] 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_exceptions'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_extras'] 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_extras'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 0m5.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 0m5.7s DEBUG: No broken symlinks as far as we can find. 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-cache', 'policy'] 0m6.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-cache', 'policy'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-cache', 'policy', 'mobyle-programs'] 0m6.3s DUMP: mobyle-programs: Installed: (none) Candidate: 5.1.2-1 Version table: 5.1.2-1 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-cache', 'policy', 'mobyle-programs'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', '-y', 'install', 'mobyle-programs=5.1.2-1'] 1m2.3s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: adwaita-icon-theme ant ant-optional apache2 apache2-bin apache2-data apache2-utils at-spi2-core bzip2 ca-certificates ca-certificates-java dbus dconf-gsettings-backend dconf-service default-jre default-jre-headless dialign emboss emboss-data emboss-lib file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-liberation glib-networking glib-networking-common glib-networking-services gnome-icon-theme graphviz gsettings-desktop-schemas gsfonts gtk-update-icon-cache hicolor-icon-theme java-common java-wrappers javascript-common jing krb5-locales libann0 libapparmor1 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libart-2.0-2 libasound2 libasound2-data libasyncns0 libatk-bridge2.0-0 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblas-common libblas3 libbsd0 libcairo-gobject2 libcairo2 libcap2 libcdt5 libcgraph6 libcolord2 libcroco3 libcups2 libdatrie1 libdbus-1-3 libdconf1 libdom4j-java libdrm-amdgpu1 libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl1-mesa libelf1 libepoxy0 libexpat1 libffi6 libflac8 libfontconfig1 libfontenc1 libfreetype6 libgail-common libgail18 libgbm1 libgd3 libgdbm3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran3 libgif7 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglib2.0-data libgmp10 libgnutls30 libgomp1 libgpm2 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0 libgtk-3-bin libgtk-3-common libgtk2.0-0 libgtk2.0-bin libgtk2.0-common libgts-0.7-5 libgts-bin libgvc6 libgvpr2 libharfbuzz0b libhogweed4 libhpdf-2.2.1 libice6 libicu57 libidn11 libisorelax-java libjaxen-java libjaxp1.3-java libjbig0 libjdom1-java libjing-java libjpeg62-turbo libjs-jquery libjs-prototype libjs-scriptaculous libjson-glib-1.0-0 libjson-glib-1.0-common libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm3.9 libltdl7 liblua5.2-0 libmagic-mgc libmagic1 libmariadbclient18 libmsv-java libncurses5 libnettle6 libnghttp2-14 libnspr4 libnss3 libogg0 libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpciaccess0 libpcsclite1 libperl5.24 libpixman-1-0 libpng16-16 libpq5 libprocps6 libproxy1v5 libpulse0 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libquadmath0 libreadline7 librelaxng-datatype-java librest-0.7-0 librsvg2-2 librsvg2-common libsasl2-2 libsasl2-modules libsasl2-modules-db libsaxon-java libsaxonhe-java libsensors4 libsm6 libsndfile1 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-0 libsquizz libssl1.0.2 libssl1.1 libtasn1-6 libthai-data libthai0 libtiff5 libtxc-dxtn-s2tc libvorbis0a libvorbisenc2 libwayland-client0 libwayland-cursor0 libwayland-egl1-mesa libwayland-server0 libwebp6 libwebpdemux2 libwebpmux2 libwrap0 libx11-6 libx11-data libx11-xcb1 libxalan2-java libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxmu6 libxmuu1 libxom-java libxpm4 libxpp2-java libxpp3-java libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxt6 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 lsb-base mime-support mobyle mobyle-tutorials mobyle-utils mysql-common ncbi-blast+ ncbi-data netbase openjdk-8-jre openjdk-8-jre-headless openssl perl perl-modules-5.24 primer3 procps psmisc python python-biopython python-biopython-doc python-bs4 python-chardet python-html5lib python-imaging python-lxml python-minimal python-numpy python-pil python-pkg-resources python-pygraphviz python-renderpm python-reportlab python-reportlab-accel python-simplejson python-simpletal python-six python-webencodings python2.7 python2.7-minimal readline-common rename sgml-base shared-mime-info squizz ssl-cert tcpd ttf-bitstream-vera ucf unzip x11-common x11-utils xdg-user-dirs xkb-data xml-core xz-utils Suggested packages: ant-doc ant-gcj default-jdk | java-compiler | java-sdk ant-optional-gcj antlr javacc junit junit4 jython libbcel-java libbsf-java libcommons-logging-java libcommons-net-java libmail-java libjdepend-java libjsch-java liblog4j1.2-java liboro-java libregexp-java www-browser apache2-doc apache2-suexec-pristine | apache2-suexec-custom bzip2-doc default-dbus-session-bus | dbus-session-bus emboss-doc emboss-test embassy clustalw graphviz-doc libasound2-plugins alsa-utils colord cups-common libdom4j-java-doc libgd-tools gnutls-bin gpm krb5-doc krb5-user gvfs libjaxp1.3-java-gcj libjdom1-java-doc liblcms2-utils pciutils pcscd pulseaudio librsvg2-bin libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal libsasl2-modules-ldap libsasl2-modules-otp libsasl2-modules-sql libsaxon-java-doc lm-sensors libxalan2-java-doc libxsltc-java libxerces2-java-doc libxerces2-java-gcj libxml-commons-resolver1.1-java-doc libxom-java-doc python-openid python-dnspython icedtea-8-plugin libnss-mdns fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei fonts-wqy-zenhei fonts-indic perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make ncbi-epcr python-doc python-tk bwa clustalo dssp fasttree mafft muscle phylip phyml prank probcons python-mysqldb python-matplotlib python-rdflib python-psycopg2 python-scipy raxml samtools t-coffee wise python-genshi python-lxml-dbg python-lxml-doc gcc gfortran python-dev python-nose python-numpy-dbg python-numpy-doc python-pil-doc python-pil-dbg python-setuptools python-pygraphviz-doc python-renderpm-dbg pdf-viewer python-egenix-mxtexttools python-reportlab-doc python2.7-doc binutils binfmt-support readline-doc sgml-base-doc openssl-blacklist zip mesa-utils debhelper The following NEW packages will be installed: adwaita-icon-theme ant ant-optional apache2 apache2-bin apache2-data apache2-utils at-spi2-core bzip2 ca-certificates ca-certificates-java dbus dconf-gsettings-backend dconf-service default-jre default-jre-headless dialign emboss emboss-data emboss-lib file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-liberation glib-networking glib-networking-common glib-networking-services gnome-icon-theme graphviz gsettings-desktop-schemas gsfonts gtk-update-icon-cache hicolor-icon-theme java-common java-wrappers javascript-common jing krb5-locales libann0 libapparmor1 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libart-2.0-2 libasound2 libasound2-data libasyncns0 libatk-bridge2.0-0 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblas-common libblas3 libbsd0 libcairo-gobject2 libcairo2 libcap2 libcdt5 libcgraph6 libcolord2 libcroco3 libcups2 libdatrie1 libdbus-1-3 libdconf1 libdom4j-java libdrm-amdgpu1 libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl1-mesa libelf1 libepoxy0 libexpat1 libffi6 libflac8 libfontconfig1 libfontenc1 libfreetype6 libgail-common libgail18 libgbm1 libgd3 libgdbm3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran3 libgif7 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglib2.0-data libgmp10 libgnutls30 libgomp1 libgpm2 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0 libgtk-3-bin libgtk-3-common libgtk2.0-0 libgtk2.0-bin libgtk2.0-common libgts-0.7-5 libgts-bin libgvc6 libgvpr2 libharfbuzz0b libhogweed4 libhpdf-2.2.1 libice6 libicu57 libidn11 libisorelax-java libjaxen-java libjaxp1.3-java libjbig0 libjdom1-java libjing-java libjpeg62-turbo libjs-jquery libjs-prototype libjs-scriptaculous libjson-glib-1.0-0 libjson-glib-1.0-common libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm3.9 libltdl7 liblua5.2-0 libmagic-mgc libmagic1 libmariadbclient18 libmsv-java libncurses5 libnettle6 libnghttp2-14 libnspr4 libnss3 libogg0 libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpciaccess0 libpcsclite1 libperl5.24 libpixman-1-0 libpng16-16 libpq5 libprocps6 libproxy1v5 libpulse0 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libquadmath0 libreadline7 librelaxng-datatype-java librest-0.7-0 librsvg2-2 librsvg2-common libsasl2-2 libsasl2-modules libsasl2-modules-db libsaxon-java libsaxonhe-java libsensors4 libsm6 libsndfile1 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-0 libsquizz libssl1.0.2 libssl1.1 libtasn1-6 libthai-data libthai0 libtiff5 libtxc-dxtn-s2tc libvorbis0a libvorbisenc2 libwayland-client0 libwayland-cursor0 libwayland-egl1-mesa libwayland-server0 libwebp6 libwebpdemux2 libwebpmux2 libwrap0 libx11-6 libx11-data libx11-xcb1 libxalan2-java libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxmu6 libxmuu1 libxom-java libxpm4 libxpp2-java libxpp3-java libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxt6 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 lsb-base mime-support mobyle mobyle-programs mobyle-tutorials mobyle-utils mysql-common ncbi-blast+ ncbi-data netbase openjdk-8-jre openjdk-8-jre-headless openssl perl perl-modules-5.24 primer3 procps psmisc python python-biopython python-biopython-doc python-bs4 python-chardet python-html5lib python-imaging python-lxml python-minimal python-numpy python-pil python-pkg-resources python-pygraphviz python-renderpm python-reportlab python-reportlab-accel python-simplejson python-simpletal python-six python-webencodings python2.7 python2.7-minimal readline-common rename sgml-base shared-mime-info squizz ssl-cert tcpd ttf-bitstream-vera ucf unzip x11-common x11-utils xdg-user-dirs xkb-data xml-core xz-utils 0 upgraded, 312 newly installed, 0 to remove and 0 not upgraded. Need to get 262 MB of archives. After this operation, 1264 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian stretch/main amd64 perl-modules-5.24 all 5.24.1-3+deb9u7 [2723 kB] Get:2 http://deb.debian.org/debian stretch/main amd64 libgdbm3 amd64 1.8.3-14 [30.0 kB] Get:3 http://deb.debian.org/debian stretch/main amd64 libperl5.24 amd64 5.24.1-3+deb9u7 [3527 kB] Get:4 http://deb.debian.org/debian stretch/main amd64 perl amd64 5.24.1-3+deb9u7 [218 kB] Get:5 http://deb.debian.org/debian stretch/main amd64 libpython2.7-minimal amd64 2.7.13-2+deb9u3 [389 kB] Get:6 http://deb.debian.org/debian stretch/main amd64 python2.7-minimal amd64 2.7.13-2+deb9u3 [1382 kB] Get:7 http://deb.debian.org/debian stretch/main amd64 python-minimal amd64 2.7.13-2 [40.5 kB] Get:8 http://deb.debian.org/debian stretch/main amd64 mime-support all 3.60 [36.7 kB] Get:9 http://deb.debian.org/debian stretch/main amd64 libexpat1 amd64 2.2.0-2+deb9u3 [83.7 kB] Get:10 http://deb.debian.org/debian stretch/main amd64 libffi6 amd64 3.2.1-6 [20.4 kB] Get:11 http://deb.debian.org/debian stretch/main amd64 readline-common all 7.0-3 [70.4 kB] Get:12 http://deb.debian.org/debian stretch/main amd64 libreadline7 amd64 7.0-3 [151 kB] Get:13 http://deb.debian.org/debian stretch/main amd64 libsqlite3-0 amd64 3.16.2-5+deb9u1 [572 kB] Get:14 http://deb.debian.org/debian stretch/main amd64 libssl1.1 amd64 1.1.0l-1~deb9u1 [1358 kB] Get:15 http://deb.debian.org/debian stretch/main amd64 libpython2.7-stdlib amd64 2.7.13-2+deb9u3 [1897 kB] Get:16 http://deb.debian.org/debian stretch/main amd64 python2.7 amd64 2.7.13-2+deb9u3 [285 kB] Get:17 http://deb.debian.org/debian stretch/main amd64 libpython-stdlib amd64 2.7.13-2 [20.0 kB] Get:18 http://deb.debian.org/debian stretch/main amd64 python amd64 2.7.13-2 [154 kB] Get:19 http://deb.debian.org/debian stretch/main amd64 lsb-base all 9.20161125 [27.9 kB] Get:20 http://deb.debian.org/debian stretch/main amd64 libncurses5 amd64 6.0+20161126-1+deb9u2 [93.4 kB] Get:21 http://deb.debian.org/debian stretch/main amd64 libprocps6 amd64 2:3.3.12-3+deb9u1 [58.5 kB] Get:22 http://deb.debian.org/debian stretch/main amd64 procps amd64 2:3.3.12-3+deb9u1 [250 kB] Get:23 http://deb.debian.org/debian stretch/main amd64 libapr1 amd64 1.5.2-5 [96.6 kB] Get:24 http://deb.debian.org/debian stretch/main amd64 libaprutil1 amd64 1.5.4-3 [85.8 kB] Get:25 http://deb.debian.org/debian stretch/main amd64 libaprutil1-dbd-sqlite3 amd64 1.5.4-3 [19.3 kB] Get:26 http://deb.debian.org/debian stretch/main amd64 libgmp10 amd64 2:6.1.2+dfsg-1 [253 kB] Get:27 http://deb.debian.org/debian stretch/main amd64 libnettle6 amd64 3.3-1+b2 [192 kB] Get:28 http://deb.debian.org/debian stretch/main amd64 libhogweed4 amd64 3.3-1+b2 [136 kB] Get:29 http://deb.debian.org/debian stretch/main amd64 libidn11 amd64 1.33-1+deb9u1 [115 kB] Get:30 http://deb.debian.org/debian stretch/main amd64 libp11-kit0 amd64 0.23.3-2 [111 kB] Get:31 http://deb.debian.org/debian stretch/main amd64 libtasn1-6 amd64 4.10-1.1+deb9u1 [50.6 kB] Get:32 http://deb.debian.org/debian stretch/main amd64 libgnutls30 amd64 3.5.8-5+deb9u5 [896 kB] Get:33 http://deb.debian.org/debian stretch/main amd64 libsasl2-modules-db amd64 2.1.27~101-g0780600+dfsg-3+deb9u1 [68.4 kB] Get:34 http://deb.debian.org/debian stretch/main amd64 libsasl2-2 amd64 2.1.27~101-g0780600+dfsg-3+deb9u1 [105 kB] Get:35 http://deb.debian.org/debian stretch/main amd64 libldap-common all 2.4.44+dfsg-5+deb9u4 [85.7 kB] Get:36 http://deb.debian.org/debian stretch/main amd64 libldap-2.4-2 amd64 2.4.44+dfsg-5+deb9u4 [219 kB] Get:37 http://deb.debian.org/debian stretch/main amd64 libaprutil1-ldap amd64 1.5.4-3 [17.4 kB] Get:38 http://deb.debian.org/debian stretch/main amd64 liblua5.2-0 amd64 5.2.4-1.1+b2 [110 kB] Get:39 http://deb.debian.org/debian stretch/main amd64 libnghttp2-14 amd64 1.18.1-1+deb9u1 [79.2 kB] Get:40 http://deb.debian.org/debian stretch/main amd64 libssl1.0.2 amd64 1.0.2u-1~deb9u1 [1304 kB] Get:41 http://deb.debian.org/debian stretch/main amd64 libicu57 amd64 57.1-6+deb9u4 [7699 kB] Get:42 http://deb.debian.org/debian stretch/main amd64 libxml2 amd64 2.9.4+dfsg1-2.2+deb9u2 [920 kB] Get:43 http://deb.debian.org/debian stretch/main amd64 apache2-bin amd64 2.4.25-3+deb9u9 [1185 kB] Get:44 http://deb.debian.org/debian stretch/main amd64 apache2-utils amd64 2.4.25-3+deb9u9 [218 kB] Get:45 http://deb.debian.org/debian stretch/main amd64 apache2-data all 2.4.25-3+deb9u9 [162 kB] Get:46 http://deb.debian.org/debian stretch/main amd64 apache2 amd64 2.4.25-3+deb9u9 [237 kB] Get:47 http://deb.debian.org/debian stretch/main amd64 libpng16-16 amd64 1.6.28-1+deb9u1 [280 kB] Get:48 http://deb.debian.org/debian stretch/main amd64 libfreetype6 amd64 2.6.3-3.2+deb9u1 [438 kB] Get:49 http://deb.debian.org/debian stretch/main amd64 ucf all 3.0036 [70.2 kB] Get:50 http://deb.debian.org/debian stretch/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:51 http://deb.debian.org/debian stretch/main amd64 ttf-bitstream-vera all 1.10-8 [352 kB] Get:52 http://deb.debian.org/debian stretch/main amd64 fonts-liberation all 1:1.07.4-2 [827 kB] Get:53 http://deb.debian.org/debian stretch/main amd64 fontconfig-config all 2.11.0-6.7 [271 kB] Get:54 http://deb.debian.org/debian stretch/main amd64 libfontconfig1 amd64 2.11.0-6.7+b1 [331 kB] Get:55 http://deb.debian.org/debian stretch/main amd64 fontconfig amd64 2.11.0-6.7+b1 [404 kB] Get:56 http://deb.debian.org/debian stretch/main amd64 libart-2.0-2 amd64 2.3.21-2 [72.7 kB] Get:57 http://deb.debian.org/debian stretch/main amd64 libogg0 amd64 1.3.2-1 [19.9 kB] Get:58 http://deb.debian.org/debian stretch/main amd64 libxau6 amd64 1:1.0.8-1 [20.7 kB] Get:59 http://deb.debian.org/debian stretch/main amd64 sgml-base all 1.29 [14.8 kB] Get:60 http://deb.debian.org/debian stretch/main amd64 netbase all 5.4 [19.1 kB] Get:61 http://deb.debian.org/debian stretch/main amd64 bzip2 amd64 1.0.6-8.1 [47.5 kB] Get:62 http://deb.debian.org/debian stretch/main amd64 libapparmor1 amd64 2.11.0-3+deb9u2 [78.9 kB] Get:63 http://deb.debian.org/debian stretch/main amd64 libdbus-1-3 amd64 1.10.32-0+deb9u1 [196 kB] Get:64 http://deb.debian.org/debian stretch/main amd64 dbus amd64 1.10.32-0+deb9u1 [213 kB] Get:65 http://deb.debian.org/debian stretch/main amd64 libmagic-mgc amd64 1:5.30-1+deb9u3 [222 kB] Get:66 http://deb.debian.org/debian stretch/main amd64 libmagic1 amd64 1:5.30-1+deb9u3 [111 kB] Get:67 http://deb.debian.org/debian stretch/main amd64 file amd64 1:5.30-1+deb9u3 [64.2 kB] Get:68 http://deb.debian.org/debian stretch/main amd64 krb5-locales all 1.15-1+deb9u1 [93.8 kB] Get:69 http://deb.debian.org/debian stretch/main amd64 libcap2 amd64 1:2.25-1 [16.8 kB] Get:70 http://deb.debian.org/debian stretch/main amd64 libbsd0 amd64 0.8.3-1 [83.0 kB] Get:71 http://deb.debian.org/debian stretch/main amd64 libedit2 amd64 3.1-20160903-3 [84.8 kB] Get:72 http://deb.debian.org/debian stretch/main amd64 libgpm2 amd64 1.20.4-6.2+b1 [34.2 kB] Get:73 http://deb.debian.org/debian stretch/main amd64 libkeyutils1 amd64 1.5.9-9 [12.4 kB] Get:74 http://deb.debian.org/debian stretch/main amd64 libkrb5support0 amd64 1.15-1+deb9u1 [61.9 kB] Get:75 http://deb.debian.org/debian stretch/main amd64 libk5crypto3 amd64 1.15-1+deb9u1 [119 kB] Get:76 http://deb.debian.org/debian stretch/main amd64 libkrb5-3 amd64 1.15-1+deb9u1 [311 kB] Get:77 http://deb.debian.org/debian stretch/main amd64 libgssapi-krb5-2 amd64 1.15-1+deb9u1 [155 kB] Get:78 http://deb.debian.org/debian stretch/main amd64 libwrap0 amd64 7.6.q-26 [58.2 kB] Get:79 http://deb.debian.org/debian stretch/main amd64 xz-utils amd64 5.2.2-1.2+b1 [266 kB] Get:80 http://deb.debian.org/debian stretch/main amd64 hicolor-icon-theme all 0.15-1 [9550 B] Get:81 http://deb.debian.org/debian stretch/main amd64 libglib2.0-0 amd64 2.50.3-2+deb9u2 [2692 kB] Get:82 http://deb.debian.org/debian stretch/main amd64 libjpeg62-turbo amd64 1:1.5.1-2 [134 kB] Get:83 http://deb.debian.org/debian stretch/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:84 http://deb.debian.org/debian stretch/main amd64 libtiff5 amd64 4.0.8-2+deb9u5 [239 kB] Get:85 http://deb.debian.org/debian stretch/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:86 http://deb.debian.org/debian stretch/main amd64 libxcb1 amd64 1.12-1 [133 kB] Get:87 http://deb.debian.org/debian stretch/main amd64 libx11-data all 2:1.6.4-3+deb9u1 [287 kB] Get:88 http://deb.debian.org/debian stretch/main amd64 libx11-6 amd64 2:1.6.4-3+deb9u1 [748 kB] Get:89 http://deb.debian.org/debian stretch/main amd64 shared-mime-info amd64 1.8-1+deb9u1 [731 kB] Get:90 http://deb.debian.org/debian stretch/main amd64 libgdk-pixbuf2.0-common all 2.36.5-2+deb9u2 [311 kB] Get:91 http://deb.debian.org/debian stretch/main amd64 libgdk-pixbuf2.0-0 amd64 2.36.5-2+deb9u2 [170 kB] Get:92 http://deb.debian.org/debian stretch/main amd64 gtk-update-icon-cache amd64 3.22.11-1 [76.6 kB] Get:93 http://deb.debian.org/debian stretch/main amd64 libpixman-1-0 amd64 0.34.0-1 [530 kB] Get:94 http://deb.debian.org/debian stretch/main amd64 libxcb-render0 amd64 1.12-1 [105 kB] Get:95 http://deb.debian.org/debian stretch/main amd64 libxcb-shm0 amd64 1.12-1 [95.9 kB] Get:96 http://deb.debian.org/debian stretch/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:97 http://deb.debian.org/debian stretch/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:98 http://deb.debian.org/debian stretch/main amd64 libcairo2 amd64 1.14.8-1 [771 kB] Get:99 http://deb.debian.org/debian stretch/main amd64 libcroco3 amd64 0.6.11-3 [143 kB] Get:100 http://deb.debian.org/debian stretch/main amd64 libthai-data all 0.1.26-1 [166 kB] Get:101 http://deb.debian.org/debian stretch/main amd64 libdatrie1 amd64 0.2.10-4+b1 [36.4 kB] Get:102 http://deb.debian.org/debian stretch/main amd64 libthai0 amd64 0.1.26-1 [52.1 kB] Get:103 http://deb.debian.org/debian stretch/main amd64 libpango-1.0-0 amd64 1.40.5-1 [320 kB] Get:104 http://deb.debian.org/debian stretch/main amd64 libgraphite2-3 amd64 1.3.10-1 [84.2 kB] Get:105 http://deb.debian.org/debian stretch/main amd64 libharfbuzz0b amd64 1.4.2-1 [671 kB] Get:106 http://deb.debian.org/debian stretch/main amd64 libpangoft2-1.0-0 amd64 1.40.5-1 [205 kB] Get:107 http://deb.debian.org/debian stretch/main amd64 libpangocairo-1.0-0 amd64 1.40.5-1 [193 kB] Get:108 http://deb.debian.org/debian stretch/main amd64 librsvg2-2 amd64 2.40.16-1+b1 [281 kB] Get:109 http://deb.debian.org/debian stretch/main amd64 librsvg2-common amd64 2.40.16-1+b1 [194 kB] Get:110 http://deb.debian.org/debian stretch/main amd64 adwaita-icon-theme all 3.22.0-1+deb9u1 [11.5 MB] Get:111 http://deb.debian.org/debian stretch/main amd64 openssl amd64 1.1.0l-1~deb9u1 [749 kB] Get:112 http://deb.debian.org/debian stretch/main amd64 ca-certificates all 20200601~deb9u1 [160 kB] Get:113 http://deb.debian.org/debian stretch/main amd64 libnspr4 amd64 2:4.12-6 [117 kB] Get:114 http://deb.debian.org/debian stretch/main amd64 libnss3 amd64 2:3.26.2-1.1+deb9u1 [1161 kB] Get:115 http://deb.debian.org/debian stretch/main amd64 ca-certificates-java all 20170929~deb9u3 [15.1 kB] Get:116 http://deb.debian.org/debian stretch/main amd64 java-common all 0.58+deb9u1 [13.6 kB] Get:117 http://deb.debian.org/debian stretch/main amd64 libavahi-common-data amd64 0.6.32-2 [118 kB] Get:118 http://deb.debian.org/debian stretch/main amd64 libavahi-common3 amd64 0.6.32-2 [52.0 kB] Get:119 http://deb.debian.org/debian stretch/main amd64 libavahi-client3 amd64 0.6.32-2 [55.3 kB] Get:120 http://deb.debian.org/debian stretch/main amd64 libcups2 amd64 2.2.1-8+deb9u6 [307 kB] Get:121 http://deb.debian.org/debian stretch/main amd64 liblcms2-2 amd64 2.8-4+deb9u1 [143 kB] Get:122 http://deb.debian.org/debian stretch/main amd64 libpcsclite1 amd64 1.8.20-1 [56.5 kB] Get:123 http://deb.debian.org/debian stretch/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB] Get:124 http://deb.debian.org/debian stretch/main amd64 x11-common all 1:7.7+19 [251 kB] Get:125 http://deb.debian.org/debian stretch/main amd64 libxtst6 amd64 2:1.2.3-1 [27.8 kB] Get:126 http://deb.debian.org/debian stretch/main amd64 openjdk-8-jre-headless amd64 8u252-b09-1~deb9u1 [27.4 MB] Get:127 http://deb.debian.org/debian stretch/main amd64 default-jre-headless amd64 2:1.8-58+deb9u1 [10.1 kB] Get:128 http://deb.debian.org/debian stretch/main amd64 ant all 1.9.9-1+deb9u1 [1923 kB] Get:129 http://deb.debian.org/debian stretch/main amd64 ant-optional all 1.9.9-1+deb9u1 [350 kB] Get:130 http://deb.debian.org/debian stretch/main amd64 libatspi2.0-0 amd64 2.22.0-6+deb9u1 [60.9 kB] Get:131 http://deb.debian.org/debian stretch/main amd64 at-spi2-core amd64 2.22.0-6+deb9u1 [69.3 kB] Get:132 http://deb.debian.org/debian stretch/main amd64 libdconf1 amd64 0.26.0-2+b1 [37.6 kB] Get:133 http://deb.debian.org/debian stretch/main amd64 dconf-service amd64 0.26.0-2+b1 [34.7 kB] Get:134 http://deb.debian.org/debian stretch/main amd64 dconf-gsettings-backend amd64 0.26.0-2+b1 [26.4 kB] Get:135 http://deb.debian.org/debian stretch/main amd64 libxrandr2 amd64 2:1.5.1-1 [37.5 kB] Get:136 http://deb.debian.org/debian stretch/main amd64 libxinerama1 amd64 2:1.1.3-1+b3 [16.7 kB] Get:137 http://deb.debian.org/debian stretch/main amd64 libdrm2 amd64 2.4.74-1 [36.2 kB] Get:138 http://deb.debian.org/debian stretch/main amd64 libglapi-mesa amd64 13.0.6-1+b2 [58.9 kB] Get:139 http://deb.debian.org/debian stretch/main amd64 libx11-xcb1 amd64 2:1.6.4-3+deb9u1 [183 kB] Get:140 http://deb.debian.org/debian stretch/main amd64 libxcb-dri2-0 amd64 1.12-1 [97.2 kB] Get:141 http://deb.debian.org/debian stretch/main amd64 libxcb-dri3-0 amd64 1.12-1 [95.6 kB] Get:142 http://deb.debian.org/debian stretch/main amd64 libxcb-glx0 amd64 1.12-1 [113 kB] Get:143 http://deb.debian.org/debian stretch/main amd64 libxcb-present0 amd64 1.12-1 [95.8 kB] Get:144 http://deb.debian.org/debian stretch/main amd64 libxcb-sync1 amd64 1.12-1 [99.2 kB] Get:145 http://deb.debian.org/debian stretch/main amd64 libxfixes3 amd64 1:5.0.3-1 [21.9 kB] Get:146 http://deb.debian.org/debian stretch/main amd64 libxdamage1 amd64 1:1.1.4-2+b3 [14.5 kB] Get:147 http://deb.debian.org/debian stretch/main amd64 libxshmfence1 amd64 1.2-1+b2 [7922 B] Get:148 http://deb.debian.org/debian stretch/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:149 http://deb.debian.org/debian stretch/main amd64 libgl1-mesa-glx amd64 13.0.6-1+b2 [167 kB] Get:150 http://deb.debian.org/debian stretch/main amd64 libgtk2.0-common all 2.24.31-2 [2693 kB] Get:151 http://deb.debian.org/debian stretch/main amd64 libatk1.0-data all 2.22.0-1 [172 kB] Get:152 http://deb.debian.org/debian stretch/main amd64 libatk1.0-0 amd64 2.22.0-1 [78.4 kB] Get:153 http://deb.debian.org/debian stretch/main amd64 libxcomposite1 amd64 1:0.4.4-2 [16.5 kB] Get:154 http://deb.debian.org/debian stretch/main amd64 libxcursor1 amd64 1:1.1.14-1+deb9u2 [34.9 kB] Get:155 http://deb.debian.org/debian stretch/main amd64 gnome-icon-theme all 3.12.0-2 [9890 kB] Get:156 http://deb.debian.org/debian stretch/main amd64 libgtk2.0-0 amd64 2.24.31-2 [1800 kB] Get:157 http://deb.debian.org/debian stretch/main amd64 libatk-bridge2.0-0 amd64 2.22.0-2 [56.3 kB] Get:158 http://deb.debian.org/debian stretch/main amd64 libcairo-gobject2 amd64 1.14.8-1 [336 kB] Get:159 http://deb.debian.org/debian stretch/main amd64 libgtk-3-common all 3.22.11-1 [3416 kB] Get:160 http://deb.debian.org/debian stretch/main amd64 libcolord2 amd64 1.3.3-2 [252 kB] Get:161 http://deb.debian.org/debian stretch/main amd64 libepoxy0 amd64 1.3.1-2 [176 kB] Get:162 http://deb.debian.org/debian stretch/main amd64 libjson-glib-1.0-common all 1.2.6-1 [166 kB] Get:163 http://deb.debian.org/debian stretch/main amd64 libjson-glib-1.0-0 amd64 1.2.6-1 [178 kB] Get:164 http://deb.debian.org/debian stretch/main amd64 libproxy1v5 amd64 0.4.14-2 [57.4 kB] Get:165 http://deb.debian.org/debian stretch/main amd64 glib-networking-common all 2.50.0-1+deb9u1 [49.2 kB] Get:166 http://deb.debian.org/debian stretch/main amd64 glib-networking-services amd64 2.50.0-1+deb9u1 [12.2 kB] Get:167 http://deb.debian.org/debian stretch/main amd64 gsettings-desktop-schemas all 3.22.0-1 [473 kB] Get:168 http://deb.debian.org/debian stretch/main amd64 glib-networking amd64 2.50.0-1+deb9u1 [57.0 kB] Get:169 http://deb.debian.org/debian stretch/main amd64 libsoup2.4-1 amd64 2.56.0-2+deb9u2 [296 kB] Get:170 http://deb.debian.org/debian stretch/main amd64 libsoup-gnome2.4-1 amd64 2.56.0-2+deb9u2 [16.4 kB] Get:171 http://deb.debian.org/debian stretch/main amd64 librest-0.7-0 amd64 0.8.0-2 [33.0 kB] Get:172 http://deb.debian.org/debian stretch/main amd64 libwayland-client0 amd64 1.12.0-1+deb9u1 [25.1 kB] Get:173 http://deb.debian.org/debian stretch/main amd64 libwayland-cursor0 amd64 1.12.0-1+deb9u1 [13.5 kB] Get:174 http://deb.debian.org/debian stretch/main amd64 libwayland-server0 amd64 1.12.0-1+deb9u1 [30.6 kB] Get:175 http://deb.debian.org/debian stretch/main amd64 libgbm1 amd64 13.0.6-1+b2 [59.2 kB] Get:176 http://deb.debian.org/debian stretch/main amd64 libxcb-xfixes0 amd64 1.12-1 [99.6 kB] Get:177 http://deb.debian.org/debian stretch/main amd64 libegl1-mesa amd64 13.0.6-1+b2 [112 kB] Get:178 http://deb.debian.org/debian stretch/main amd64 libwayland-egl1-mesa amd64 13.0.6-1+b2 [43.0 kB] Get:179 http://deb.debian.org/debian stretch/main amd64 xkb-data all 2.19-1+deb9u1 [650 kB] Get:180 http://deb.debian.org/debian stretch/main amd64 libxkbcommon0 amd64 0.7.1-2~deb9u1 [122 kB] Get:181 http://deb.debian.org/debian stretch/main amd64 libgtk-3-0 amd64 3.22.11-1 [2529 kB] Get:182 http://deb.debian.org/debian stretch/main amd64 libfontenc1 amd64 1:1.1.3-1+b2 [24.4 kB] Get:183 http://deb.debian.org/debian stretch/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:184 http://deb.debian.org/debian stretch/main amd64 libsm6 amd64 2:1.2.2-1+b3 [33.3 kB] Get:185 http://deb.debian.org/debian stretch/main amd64 libxt6 amd64 1:1.1.5-1 [188 kB] Get:186 http://deb.debian.org/debian stretch/main amd64 libxmu6 amd64 2:1.1.2-2 [60.3 kB] Get:187 http://deb.debian.org/debian stretch/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:188 http://deb.debian.org/debian stretch/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get:189 http://deb.debian.org/debian stretch/main amd64 libxcb-shape0 amd64 1.12-1 [96.2 kB] Get:190 http://deb.debian.org/debian stretch/main amd64 libxft2 amd64 2.3.2-1+b2 [56.5 kB] Get:191 http://deb.debian.org/debian stretch/main amd64 libxmuu1 amd64 2:1.1.2-2 [23.5 kB] Get:192 http://deb.debian.org/debian stretch/main amd64 libxv1 amd64 2:1.0.11-1 [24.6 kB] Get:193 http://deb.debian.org/debian stretch/main amd64 libxxf86dga1 amd64 2:1.1.4-1+b3 [22.1 kB] Get:194 http://deb.debian.org/debian stretch/main amd64 x11-utils amd64 7.7+3+b1 [202 kB] Get:195 http://deb.debian.org/debian stretch/main amd64 libatk-wrapper-java all 0.33.3-13+deb9u1 [44.1 kB] Get:196 http://deb.debian.org/debian stretch/main amd64 libatk-wrapper-java-jni amd64 0.33.3-13+deb9u1 [37.5 kB] Get:197 http://deb.debian.org/debian stretch/main amd64 libasound2-data all 1.1.3-5 [173 kB] Get:198 http://deb.debian.org/debian stretch/main amd64 libasound2 amd64 1.1.3-5 [497 kB] Get:199 http://deb.debian.org/debian stretch/main amd64 libgif7 amd64 5.1.4-0.4 [43.1 kB] Get:200 http://deb.debian.org/debian stretch/main amd64 libasyncns0 amd64 0.8-6 [12.5 kB] Get:201 http://deb.debian.org/debian stretch/main amd64 libflac8 amd64 1.3.2-1 [221 kB] Get:202 http://deb.debian.org/debian stretch/main amd64 libvorbis0a amd64 1.3.5-4+deb9u2 [91.7 kB] Get:203 http://deb.debian.org/debian stretch/main amd64 libvorbisenc2 amd64 1.3.5-4+deb9u2 [79.4 kB] Get:204 http://deb.debian.org/debian stretch/main amd64 libsndfile1 amd64 1.0.27-3 [248 kB] Get:205 http://deb.debian.org/debian stretch/main amd64 libpulse0 amd64 10.0-1+deb9u1 [283 kB] Get:206 http://deb.debian.org/debian stretch/main amd64 openjdk-8-jre amd64 8u252-b09-1~deb9u1 [69.8 kB] Get:207 http://deb.debian.org/debian stretch/main amd64 default-jre amd64 2:1.8-58+deb9u1 [930 B] Get:208 http://deb.debian.org/debian stretch/main amd64 dialign amd64 2.2.1-8 [138 kB] Get:209 http://deb.debian.org/debian stretch/main amd64 libwebp6 amd64 0.5.2-1 [235 kB] Get:210 http://deb.debian.org/debian stretch/main amd64 libgd3 amd64 2.2.4-2+deb9u5 [132 kB] Get:211 http://deb.debian.org/debian stretch/main amd64 libhpdf-2.2.1 amd64 2.2.1-1.1+b1 [319 kB] Get:212 http://deb.debian.org/debian stretch/main amd64 mysql-common all 5.8+1.0.2 [5608 B] Get:213 http://deb.debian.org/debian stretch/main amd64 libmariadbclient18 amd64 10.1.45-0+deb9u1 [785 kB] Get:214 http://deb.debian.org/debian stretch/main amd64 libpq5 amd64 9.6.17-0+deb9u1 [137 kB] Get:215 http://deb.debian.org/debian stretch/main amd64 emboss-lib amd64 6.6.0+dfsg-6 [2773 kB] Get:216 http://deb.debian.org/debian stretch/main amd64 emboss-data all 6.6.0+dfsg-6 [61.1 MB] Get:217 http://deb.debian.org/debian stretch/main amd64 emboss amd64 6.6.0+dfsg-6 [1058 kB] Get:218 http://deb.debian.org/debian stretch/main amd64 fonts-dejavu-extra all 2.37-1 [1982 kB] Get:219 http://deb.debian.org/debian stretch/main amd64 libann0 amd64 1.1.2+doc-6 [24.9 kB] Get:220 http://deb.debian.org/debian stretch/main amd64 libcdt5 amd64 2.38.0-17 [59.6 kB] Get:221 http://deb.debian.org/debian stretch/main amd64 libcgraph6 amd64 2.38.0-17 [82.2 kB] Get:222 http://deb.debian.org/debian stretch/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-4 [158 kB] Get:223 http://deb.debian.org/debian stretch/main amd64 libltdl7 amd64 2.4.6-2 [389 kB] Get:224 http://deb.debian.org/debian stretch/main amd64 libpathplan4 amd64 2.38.0-17 [62.8 kB] Get:225 http://deb.debian.org/debian stretch/main amd64 libxdot4 amd64 2.38.0-17 [55.6 kB] Get:226 http://deb.debian.org/debian stretch/main amd64 libgvc6 amd64 2.38.0-17 [639 kB] Get:227 http://deb.debian.org/debian stretch/main amd64 libgvpr2 amd64 2.38.0-17 [211 kB] Get:228 http://deb.debian.org/debian stretch/main amd64 graphviz amd64 2.38.0-17 [802 kB] Get:229 http://deb.debian.org/debian stretch/main amd64 gsfonts all 1:8.11+urwcyr1.0.7~pre44-4.3 [3126 kB] Get:230 http://deb.debian.org/debian stretch/main amd64 unzip amd64 6.0-21+deb9u2 [172 kB] Get:231 http://deb.debian.org/debian stretch/main amd64 java-wrappers all 0.1.28 [10.7 kB] Get:232 http://deb.debian.org/debian stretch/main amd64 javascript-common all 11 [6120 B] Get:233 http://deb.debian.org/debian stretch/main amd64 libblas-common amd64 3.7.0-2 [14.2 kB] Get:234 http://deb.debian.org/debian stretch/main amd64 libquadmath0 amd64 6.3.0-18+deb9u1 [131 kB] Get:235 http://deb.debian.org/debian stretch/main amd64 libgfortran3 amd64 6.3.0-18+deb9u1 [265 kB] Get:236 http://deb.debian.org/debian stretch/main amd64 libblas3 amd64 3.7.0-2 [155 kB] Get:237 http://deb.debian.org/debian stretch/main amd64 libjaxen-java all 1.1.6-1+deb9u1 [205 kB] Get:238 http://deb.debian.org/debian stretch/main amd64 libisorelax-java all 20041111-9 [62.4 kB] Get:239 http://deb.debian.org/debian stretch/main amd64 librelaxng-datatype-java all 1.0+ds1-3 [11.7 kB] Get:240 http://deb.debian.org/debian stretch/main amd64 libxml-commons-resolver1.1-java all 1.2-7 [91.9 kB] Get:241 http://deb.debian.org/debian stretch/main amd64 libxml-commons-external-java all 1.4.01-2 [245 kB] Get:242 http://deb.debian.org/debian stretch/main amd64 libxerces2-java all 2.11.0-7 [1365 kB] Get:243 http://deb.debian.org/debian stretch/main amd64 libmsv-java all 2009.1+dfsg1-5 [771 kB] Get:244 http://deb.debian.org/debian stretch/main amd64 libxpp2-java all 2.1.10-7 [147 kB] Get:245 http://deb.debian.org/debian stretch/main amd64 libxpp3-java all 1.1.4c-2 [349 kB] Get:246 http://deb.debian.org/debian stretch/main amd64 libdom4j-java all 1.6.1+dfsg.3-2+deb9u1 [348 kB] Get:247 http://deb.debian.org/debian stretch/main amd64 libdrm-amdgpu1 amd64 2.4.74-1 [26.4 kB] Get:248 http://deb.debian.org/debian stretch/main amd64 libpciaccess0 amd64 0.13.4-1+b2 [50.0 kB] Get:249 http://deb.debian.org/debian stretch/main amd64 libdrm-intel1 amd64 2.4.74-1 [68.7 kB] Get:250 http://deb.debian.org/debian stretch/main amd64 libdrm-nouveau2 amd64 2.4.74-1 [25.1 kB] Get:251 http://deb.debian.org/debian stretch/main amd64 libdrm-radeon1 amd64 2.4.74-1 [30.2 kB] Get:252 http://deb.debian.org/debian stretch/main amd64 libelf1 amd64 0.168-1 [157 kB] Get:253 http://deb.debian.org/debian stretch/main amd64 libgail18 amd64 2.24.31-2 [54.1 kB] Get:254 http://deb.debian.org/debian stretch/main amd64 libgail-common amd64 2.24.31-2 [153 kB] Get:255 http://deb.debian.org/debian stretch/main amd64 libllvm3.9 amd64 1:3.9.1-9 [11.3 MB] Get:256 http://deb.debian.org/debian stretch/main amd64 libsensors4 amd64 1:3.4.0-4 [53.3 kB] Get:257 http://deb.debian.org/debian stretch/main amd64 libgl1-mesa-dri amd64 13.0.6-1+b2 [4536 kB] Get:258 http://deb.debian.org/debian stretch/main amd64 libglib2.0-data all 2.50.3-2+deb9u2 [2517 kB] Get:259 http://deb.debian.org/debian stretch/main amd64 libgomp1 amd64 6.3.0-18+deb9u1 [73.3 kB] Get:260 http://deb.debian.org/debian stretch/main amd64 libgtk-3-bin amd64 3.22.11-1 [110 kB] Get:261 http://deb.debian.org/debian stretch/main amd64 libgtk2.0-bin amd64 2.24.31-2 [47.1 kB] Get:262 http://deb.debian.org/debian stretch/main amd64 libgts-bin amd64 0.7.6+darcs121130-4 [50.8 kB] Get:263 http://deb.debian.org/debian stretch/main amd64 libjaxp1.3-java all 1.3.05-2 [450 kB] Get:264 http://deb.debian.org/debian stretch/main amd64 libjdom1-java all 1.1.3-1 [150 kB] Get:265 http://deb.debian.org/debian stretch/main amd64 libjs-jquery all 3.1.1-2+deb9u1 [154 kB] Get:266 http://deb.debian.org/debian stretch/main amd64 libjs-prototype all 1.7.1-3 [44.3 kB] Get:267 http://deb.debian.org/debian stretch/main amd64 libjs-scriptaculous all 1.9.0-2 [129 kB] Get:268 http://deb.debian.org/debian stretch/main amd64 liblapack3 amd64 3.7.0-2 [2141 kB] Get:269 http://deb.debian.org/debian stretch/main amd64 libsasl2-modules amd64 2.1.27~101-g0780600+dfsg-3+deb9u1 [102 kB] Get:270 http://deb.debian.org/debian stretch/main amd64 libsaxon-java all 1:6.5.5-10 [1076 kB] Get:271 http://deb.debian.org/debian stretch/main amd64 libxom-java all 1.2.10-1 [170 kB] Get:272 http://deb.debian.org/debian stretch/main amd64 libsaxonhe-java all 9.5.1.1+dfsg-2 [2908 kB] Get:273 http://deb.debian.org/debian stretch/main amd64 libsquizz amd64 0.99c+dfsg-1 [265 kB] Get:274 http://deb.debian.org/debian stretch/main amd64 libwebpdemux2 amd64 0.5.2-1 [73.7 kB] Get:275 http://deb.debian.org/debian stretch/main amd64 libwebpmux2 amd64 0.5.2-1 [83.9 kB] Get:276 http://deb.debian.org/debian stretch/main amd64 libxalan2-java all 2.7.1-9 [3169 kB] Get:277 http://deb.debian.org/debian stretch/main amd64 libxslt1.1 amd64 1.1.29-2.1+deb9u2 [233 kB] Get:278 http://deb.debian.org/debian stretch/main amd64 mobyle-utils amd64 1.5.5+dfsg-2 [12.0 kB] Get:279 http://deb.debian.org/debian stretch/main amd64 python-numpy amd64 1:1.12.1-3 [1936 kB] Get:280 http://deb.debian.org/debian stretch/main amd64 python-reportlab-accel amd64 3.3.0-2+deb9u1 [36.8 kB] Get:281 http://deb.debian.org/debian stretch/main amd64 python-reportlab all 3.3.0-2+deb9u1 [478 kB] Get:282 http://deb.debian.org/debian stretch/main amd64 python-biopython amd64 1.68+dfsg-3 [1201 kB] Get:283 http://deb.debian.org/debian stretch/main amd64 python-pil amd64 4.0.0-4+deb9u1 [376 kB] Get:284 http://deb.debian.org/debian stretch/main amd64 python-imaging all 4.0.0-4+deb9u1 [50.5 kB] Get:285 http://deb.debian.org/debian stretch/main amd64 python-lxml amd64 3.7.1-1 [903 kB] Get:286 http://deb.debian.org/debian stretch/main amd64 python-pygraphviz amd64 1.4~rc1-1 [75.9 kB] Get:287 http://deb.debian.org/debian stretch/main amd64 python-simplejson amd64 3.10.0-1 [70.5 kB] Get:288 http://deb.debian.org/debian stretch/main amd64 python-simpletal all 4.1-9 [41.6 kB] Get:289 http://deb.debian.org/debian stretch/main amd64 squizz amd64 0.99c+dfsg-1 [31.2 kB] Get:290 http://deb.debian.org/debian stretch/main amd64 mobyle all 1.5.5+dfsg-2 [4546 kB] Get:291 http://deb.debian.org/debian stretch/main amd64 mobyle-programs all 5.1.2-1 [336 kB] Get:292 http://deb.debian.org/debian stretch/main amd64 mobyle-tutorials all 1.5.0-2 [9002 B] Get:293 http://deb.debian.org/debian stretch/main amd64 ncbi-data all 6.1.20170106+dfsg1-0+deb9u1 [3555 kB] Get:294 http://deb.debian.org/debian stretch/main amd64 ncbi-blast+ amd64 2.6.0-1 [9591 kB] Get:295 http://deb.debian.org/debian stretch/main amd64 primer3 amd64 2.3.7-3 [173 kB] Get:296 http://deb.debian.org/debian stretch/main amd64 psmisc amd64 22.21-2.1+b2 [123 kB] Get:297 http://deb.debian.org/debian stretch/main amd64 python-biopython-doc all 1.68+dfsg-3 [11.8 MB] Get:298 http://deb.debian.org/debian stretch/main amd64 python-bs4 all 4.5.3-1 [86.7 kB] Get:299 http://deb.debian.org/debian stretch/main amd64 python-pkg-resources all 33.1.1-1 [166 kB] Get:300 http://deb.debian.org/debian stretch/main amd64 python-chardet all 2.3.0-2 [96.0 kB] Get:301 http://deb.debian.org/debian stretch/main amd64 python-six all 1.10.0-3 [14.4 kB] Get:302 http://deb.debian.org/debian stretch/main amd64 python-webencodings all 0.5-2 [10.3 kB] Get:303 http://deb.debian.org/debian stretch/main amd64 python-html5lib all 0.999999999-1 [88.0 kB] Get:304 http://deb.debian.org/debian stretch/main amd64 python-renderpm amd64 3.3.0-2+deb9u1 [47.3 kB] Get:305 http://deb.debian.org/debian stretch/main amd64 rename all 0.20-4 [12.5 kB] Get:306 http://deb.debian.org/debian stretch/main amd64 ssl-cert all 1.0.39 [20.8 kB] Get:307 http://deb.debian.org/debian stretch/main amd64 tcpd amd64 7.6.q-26 [23.3 kB] Get:308 http://deb.debian.org/debian stretch/main amd64 xdg-user-dirs amd64 0.15-2+b1 [52.2 kB] Get:309 http://deb.debian.org/debian stretch/main amd64 xml-core all 0.17 [23.2 kB] Get:310 http://deb.debian.org/debian stretch/main amd64 libjing-java all 20131210+dfsg+1-6 [633 kB] Get:311 http://deb.debian.org/debian stretch/main amd64 jing all 20131210+dfsg+1-6 [7692 B] Get:312 http://deb.debian.org/debian stretch/main amd64 libtxc-dxtn-s2tc amd64 1.0+git20151227-2 [48.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 262 MB in 3s (69.2 MB/s) Selecting previously unselected package perl-modules-5.24. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4411 files and directories currently installed.) Preparing to unpack .../00-perl-modules-5.24_5.24.1-3+deb9u7_all.deb ... Unpacking perl-modules-5.24 (5.24.1-3+deb9u7) ... Selecting previously unselected package libgdbm3:amd64. Preparing to unpack .../01-libgdbm3_1.8.3-14_amd64.deb ... Unpacking libgdbm3:amd64 (1.8.3-14) ... Selecting previously unselected package libperl5.24:amd64. 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Unpacking libtxc-dxtn-s2tc:amd64 (1.0+git20151227-2) ... Setting up libquadmath0:amd64 (6.3.0-18+deb9u1) ... Setting up libncurses5:amd64 (6.0+20161126-1+deb9u2) ... Setting up libart-2.0-2:amd64 (2.3.21-2) ... Setting up libgomp1:amd64 (6.3.0-18+deb9u1) ... Setting up libjs-jquery (3.1.1-2+deb9u1) ... Setting up libapr1:amd64 (1.5.2-5) ... Setting up readline-common (7.0-3) ... Setting up perl-modules-5.24 (5.24.1-3+deb9u7) ... Setting up libgdbm3:amd64 (1.8.3-14) ... Setting up libperl5.24:amd64 (5.24.1-3+deb9u7) ... Setting up libnettle6:amd64 (3.3-1+b2) ... Setting up libpathplan4 (2.38.0-17) ... Setting up libexpat1:amd64 (2.2.0-2+deb9u3) ... Setting up libjaxp1.3-java (1.3.05-2) ... Setting up libjson-glib-1.0-common (1.2.6-1) ... Setting up libgtk2.0-common (2.24.31-2) ... Setting up libxdot4 (2.38.0-17) ... Setting up libasyncns0:amd64 (0.8-6) ... Setting up glib-networking-common (2.50.0-1+deb9u1) ... Setting up libjpeg62-turbo:amd64 (1:1.5.1-2) ... Setting up psmisc (22.21-2.1+b2) ... Setting up libnghttp2-14:amd64 (1.18.1-1+deb9u1) ... Setting up mime-support (3.60) ... Setting up gsfonts (1:8.11+urwcyr1.0.7~pre44-4.3) ... Setting up mobyle-utils (1.5.5+dfsg-2) ... Setting up libpng16-16:amd64 (1.6.28-1+deb9u1) ... Setting up libisorelax-java (20041111-9) ... Setting up liblcms2-2:amd64 (2.8-4+deb9u1) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libpcsclite1:amd64 (1.8.20-1) ... Setting up libgpm2:amd64 (1.20.4-6.2+b1) ... Setting up libldap-common (2.4.44+dfsg-5+deb9u4) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libreadline7:amd64 (7.0-3) ... Setting up libblas-common (3.7.0-2) ... Setting up libxml-commons-external-java (1.4.01-2) ... Setting up libelf1:amd64 (0.168-1) ... Setting up libgfortran3:amd64 (6.3.0-18+deb9u1) ... Setting up mysql-common (5.8+1.0.2) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libasound2-data (1.1.3-5) ... Setting up libxshmfence1:amd64 (1.2-1+b2) ... Setting up libcap2:amd64 (1:2.25-1) ... Setting up xkb-data (2.19-1+deb9u1) ... Setting up libsasl2-modules-db:amd64 (2.1.27~101-g0780600+dfsg-3+deb9u1) ... Setting up unzip (6.0-21+deb9u2) ... Setting up libproxy1v5:amd64 (0.4.14-2) ... Setting up dialign (2.2.1-8) ... Setting up java-common (0.58+deb9u1) ... Setting up libsasl2-2:amd64 (2.1.27~101-g0780600+dfsg-3+deb9u1) ... Setting up apache2-data (2.4.25-3+deb9u9) ... Setting up libgdk-pixbuf2.0-common (2.36.5-2+deb9u2) ... Setting up libdatrie1:amd64 (0.2.10-4+b1) ... Setting up libtiff5:amd64 (4.0.8-2+deb9u5) ... Setting up libtxc-dxtn-s2tc:amd64 (1.0+git20151227-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/s2tc/libtxc_dxtn.so to provide /usr/lib/x86_64-linux-gnu/libtxc_dxtn.so (libtxc-dxtn-x86_64-linux-gnu) in auto mode Setting up libgif7:amd64 (5.1.4-0.4) ... Setting up libmariadbclient18:amd64 (10.1.45-0+deb9u1) ... Setting up libglapi-mesa:amd64 (13.0.6-1+b2) ... Setting up python-biopython-doc (1.68+dfsg-3) ... Setting up sgml-base (1.29) ... Setting up libicu57:amd64 (57.1-6+deb9u4) ... Setting up libbsd0:amd64 (0.8.3-1) ... Setting up fonts-liberation (1:1.07.4-2) ... Setting up libprocps6:amd64 (2:3.3.12-3+deb9u1) ... Setting up libnspr4:amd64 (2:4.12-6) ... Setting up ucf (3.0036) ... Setting up libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u2) ... Setting up libfreetype6:amd64 (2.6.3-3.2+deb9u1) ... Setting up libtasn1-6:amd64 (4.10-1.1+deb9u1) ... Setting up libmagic-mgc (1:5.30-1+deb9u3) ... Setting up libasound2:amd64 (1.1.3-5) ... Setting up libdrm2:amd64 (2.4.74-1) ... Setting up bzip2 (1.0.6-8.1) ... Setting up libmagic1:amd64 (1:5.30-1+deb9u3) ... Setting up lsb-base (9.20161125) ... Setting up libgraphite2-3:amd64 (1.3.10-1) ... Setting up procps (2:3.3.12-3+deb9u1) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libxslt1.1:amd64 (1.1.29-2.1+deb9u2) ... Setting up perl (5.24.1-3+deb9u7) ... update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode Setting up libogg0:amd64 (1.3.2-1) ... Setting up libssl1.0.2:amd64 (1.0.2u-1~deb9u1) ... Setting up libatk1.0-data (2.22.0-1) ... Setting up libxml-commons-resolver1.1-java (1.2-7) ... Setting up libx11-xcb1:amd64 (2:1.6.4-3+deb9u1) ... Setting up libgmp10:amd64 (2:6.1.2+dfsg-1) ... Setting up ncbi-data (6.1.20170106+dfsg1-0+deb9u1) ... Setting up libpixman-1-0:amd64 (0.34.0-1) ... Setting up libblas3 (3.7.0-2) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up libglib2.0-data (2.50.3-2+deb9u2) ... Setting up krb5-locales (1.15-1+deb9u1) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... Setting up libepoxy0:amd64 (1.3.1-2) ... Setting up libapparmor1:amd64 (2.11.0-3+deb9u2) ... Setting up libssl1.1:amd64 (1.1.0l-1~deb9u1) ... Setting up xz-utils (5.2.2-1.2+b1) ... update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode Setting up libjaxen-java (1.1.6-1+deb9u1) ... Setting up primer3 (2.3.7-3) ... Setting up libaprutil1:amd64 (1.5.4-3) ... Setting up libltdl7:amd64 (2.4.6-2) ... Setting up openssl (1.1.0l-1~deb9u1) ... Setting up libsqlite3-0:amd64 (3.16.2-5+deb9u1) ... Setting up libann0 (1.1.2+doc-6) ... Setting up libfontenc1:amd64 (1:1.1.3-1+b2) ... Setting up emboss-data (6.6.0+dfsg-6) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up libpciaccess0:amd64 (0.13.4-1+b2) ... Setting up libsensors4:amd64 (1:3.4.0-4) ... Setting up libxkbcommon0:amd64 (0.7.1-2~deb9u1) ... Setting up libffi6:amd64 (3.2.1-6) ... Setting up liblua5.2-0:amd64 (5.2.4-1.1+b2) ... Setting up libdrm-radeon1:amd64 (2.4.74-1) ... Setting up libthai-data (0.1.26-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up xml-core (0.17) ... Setting up javascript-common (11) ... Package apache2 is not configured yet. Will defer actions by package javascript-common. Setting up libsquizz (0.99c+dfsg-1) ... Setting up libkeyutils1:amd64 (1.5.9-9) ... Setting up libdrm-nouveau2:amd64 (2.4.74-1) ... Setting up libsasl2-modules:amd64 (2.1.27~101-g0780600+dfsg-3+deb9u1) ... Setting up fonts-dejavu-extra (2.37-1) ... Setting up libjs-prototype (1.7.1-3) ... Setting up libvorbis0a:amd64 (1.3.5-4+deb9u2) ... Setting up x11-common (1:7.7+19) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up ca-certificates (20200601~deb9u1) ... Updating certificates in /etc/ssl/certs... 126 added, 0 removed; done. Setting up hicolor-icon-theme (0.15-1) ... Setting up libxpp3-java (1.1.4c-2) ... Setting up xdg-user-dirs (0.15-2+b1) ... Setting up libxpp2-java (2.1.10-7) ... Setting up libcdt5 (2.38.0-17) ... Setting up libx11-data (2:1.6.4-3+deb9u1) ... Setting up libpython2.7-stdlib:amd64 (2.7.13-2+deb9u3) ... Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up libidn11:amd64 (1.33-1+deb9u1) ... Setting up libdbus-1-3:amd64 (1.10.32-0+deb9u1) ... Setting up librelaxng-datatype-java (1.0+ds1-3) ... Setting up squizz (0.99c+dfsg-1) ... Setting up libsaxon-java (1:6.5.5-10) ... Setting up libwrap0:amd64 (7.6.q-26) ... Setting up libavahi-common-data:amd64 (0.6.32-2) ... Setting up libcgraph6 (2.38.0-17) ... Setting up libwayland-server0:amd64 (1.12.0-1+deb9u1) ... Setting up netbase (5.4) ... Setting up libwebp6:amd64 (0.5.2-1) ... Setting up libedit2:amd64 (3.1-20160903-3) ... Setting up libhpdf-2.2.1 (2.2.1-1.1+b1) ... Setting up fontconfig-config (2.11.0-6.7) ... Setting up libdrm-amdgpu1:amd64 (2.4.74-1) ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.5.4-3) ... Setting up rename (0.20-4) ... update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode Setting up libgvpr2 (2.38.0-17) ... Setting up apache2-utils (2.4.25-3+deb9u9) ... Setting up liblapack3 (3.7.0-2) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up java-wrappers (0.1.28) ... Setting up libglib2.0-0:amd64 (2.50.3-2+deb9u2) ... Setting up libllvm3.9:amd64 (1:3.9.1-9) ... Setting up libwayland-client0:amd64 (1.12.0-1+deb9u1) ... Setting up libgbm1:amd64 (13.0.6-1+b2) ... Setting up libflac8:amd64 (1.3.2-1) ... Setting up python2.7 (2.7.13-2+deb9u3) ... Setting up libwebpmux2:amd64 (0.5.2-1) ... Setting up libnss3:amd64 (2:3.26.2-1.1+deb9u1) ... Setting up libharfbuzz0b:amd64 (1.4.2-1) ... Setting up glib-networking-services (2.50.0-1+deb9u1) ... Setting up ssl-cert (1.0.39) ... Setting up libthai0:amd64 (0.1.26-1) ... Setting up libjs-scriptaculous (1.9.0-2) ... Setting up file (1:5.30-1+deb9u3) ... Setting up tcpd (7.6.q-26) ... Setting up libkrb5support0:amd64 (1.15-1+deb9u1) ... Setting up libjson-glib-1.0-0:amd64 (1.2.6-1) ... Setting up libhogweed4:amd64 (3.3-1+b2) ... Setting up libcroco3:amd64 (0.6.11-3) ... Setting up libxerces2-java (2.11.0-7) ... Setting up libpython-stdlib:amd64 (2.7.13-2) ... Setting up libdrm-intel1:amd64 (2.4.74-1) ... Setting up libxalan2-java (2.7.1-9) ... Setting up libxom-java (1.2.10-1) ... Setting up libjdom1-java (1.1.3-1) ... Setting up libatk1.0-0:amd64 (2.22.0-1) ... Setting up libp11-kit0:amd64 (0.23.3-2) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libdconf1:amd64 (0.26.0-2+b1) ... Setting up libwebpdemux2:amd64 (0.5.2-1) ... Setting up shared-mime-info (1.8-1+deb9u1) ... Setting up libavahi-common3:amd64 (0.6.32-2) ... Setting up libcolord2:amd64 (1.3.3-2) ... Setting up dbus (1.10.32-0+deb9u1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libvorbisenc2:amd64 (1.3.5-4+deb9u2) ... Setting up libxcb1:amd64 (1.12-1) ... Setting up libwayland-cursor0:amd64 (1.12.0-1+deb9u1) ... Setting up python (2.7.13-2) ... Setting up python-simplejson (3.10.0-1) ... Setting up libxcb-present0:amd64 (1.12-1) ... Setting up libgts-0.7-5:amd64 (0.7.6+darcs121130-4) ... Setting up libfontconfig1:amd64 (2.11.0-6.7+b1) ... Setting up libxcb-dri2-0:amd64 (1.12-1) ... Setting up libsm6:amd64 (2:1.2.2-1+b3) ... Setting up libxcb-dri3-0:amd64 (1.12-1) ... Setting up libk5crypto3:amd64 (1.15-1+deb9u1) ... Setting up libxcb-glx0:amd64 (1.12-1) ... Setting up libxcb-xfixes0:amd64 (1.12-1) ... Setting up libxcb-render0:amd64 (1.12-1) ... Setting up dconf-service (0.26.0-2+b1) ... Setting up python-reportlab-accel:amd64 (3.3.0-2+deb9u1) ... Setting up python-reportlab (3.3.0-2+deb9u1) ... Setting up libgnutls30:amd64 (3.5.8-5+deb9u5) ... Setting up libx11-6:amd64 (2:1.6.4-3+deb9u1) ... Setting up libgl1-mesa-dri:amd64 (13.0.6-1+b2) ... Setting up python-pkg-resources (33.1.1-1) ... Setting up libxmuu1:amd64 (2:1.1.2-2) ... Setting up python-numpy (1:1.12.1-3) ... Setting up libxcb-sync1:amd64 (1.12-1) ... Setting up libsndfile1:amd64 (1.0.27-3) ... Setting up python-six (1.10.0-3) ... Setting up python-bs4 (4.5.3-1) ... Setting up libldap-2.4-2:amd64 (2.4.44+dfsg-5+deb9u4) ... Setting up python-lxml (3.7.1-1) ... Setting up python-renderpm:amd64 (3.3.0-2+deb9u1) ... Setting up libxcomposite1:amd64 (1:0.4.4-2) ... Setting up libxcb-shm0:amd64 (1.12-1) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up python-simpletal (4.1-9) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libxcb-shape0:amd64 (1.12-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libavahi-client3:amd64 (0.6.32-2) ... Setting up libkrb5-3:amd64 (1.15-1+deb9u1) ... Setting up libgts-bin (0.7.6+darcs121130-4) ... Setting up libxft2:amd64 (2.3.2-1+b2) ... Setting up dconf-gsettings-backend:amd64 (0.26.0-2+b1) ... Setting up python-pil:amd64 (4.0.0-4+deb9u1) ... Setting up python-webencodings (0.5-2) ... Setting up fontconfig (2.11.0-6.7+b1) ... Regenerating fonts cache... done. Setting up libaprutil1-ldap:amd64 (1.5.4-3) ... Setting up libegl1-mesa:amd64 (13.0.6-1+b2) ... Setting up python-biopython (1.68+dfsg-3) ... Setting up python-chardet (2.3.0-2) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libxfixes3:amd64 (1:5.0.3-1) ... Setting up gsettings-desktop-schemas (3.22.0-1) ... Setting up libgtk-3-common (3.22.11-1) ... Setting up libatspi2.0-0:amd64 (2.22.0-6+deb9u1) ... Setting up libgdk-pixbuf2.0-0:amd64 (2.36.5-2+deb9u2) ... Setting up ncbi-blast+ (2.6.0-1) ... Setting up apache2-bin (2.4.25-3+deb9u9) ... Setting up libgd3:amd64 (2.2.4-2+deb9u5) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up libgssapi-krb5-2:amd64 (1.15-1+deb9u1) ... Setting up python-imaging (4.0.0-4+deb9u1) ... Setting up gtk-update-icon-cache (3.22.11-1) ... Setting up libxcursor1:amd64 (1:1.1.14-1+deb9u2) ... Setting up libpq5:amd64 (9.6.17-0+deb9u1) ... Setting up libxxf86dga1:amd64 (2:1.1.4-1+b3) ... Setting up glib-networking:amd64 (2.50.0-1+deb9u1) ... Setting up libpango-1.0-0:amd64 (1.40.5-1) ... Setting up emboss-lib (6.6.0+dfsg-6) ... Setting up libwayland-egl1-mesa:amd64 (13.0.6-1+b2) ... Setting up libatk-bridge2.0-0:amd64 (2.22.0-2) ... Setting up libxv1:amd64 (2:1.0.11-1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up python-html5lib (0.999999999-1) ... Setting up libxrandr2:amd64 (2:1.5.1-1) ... Setting up libcups2:amd64 (2.2.1-8+deb9u6) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libxaw7:amd64 (2:1.0.13-1+b2) ... Setting up libcairo2:amd64 (1.14.8-1) ... Setting up libxinerama1:amd64 (2:1.1.3-1+b3) ... Setting up libxdamage1:amd64 (1:1.1.4-2+b3) ... Setting up apache2 (2.4.25-3+deb9u9) ... Enabling module mpm_event. Enabling module authz_core. Enabling module authz_host. Enabling module authn_core. Enabling module auth_basic. Enabling module access_compat. Enabling module authn_file. Enabling module authz_user. Enabling module alias. Enabling module dir. Enabling module autoindex. Enabling module env. Enabling module mime. Enabling module negotiation. Enabling module setenvif. Enabling module filter. Enabling module deflate. Enabling module status. Enabling module reqtimeout. Enabling conf charset. Enabling conf localized-error-pages. Enabling conf other-vhosts-access-log. Enabling conf security. Enabling conf serve-cgi-bin. Enabling site 000-default. info: Executing deferred 'a2enconf javascript-common' for package javascript-common Enabling conf javascript-common. invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libcairo-gobject2:amd64 (1.14.8-1) ... Setting up libsoup2.4-1:amd64 (2.56.0-2+deb9u2) ... Setting up libsoup-gnome2.4-1:amd64 (2.56.0-2+deb9u2) ... Setting up libxtst6:amd64 (2:1.2.3-1) ... Setting up libpangoft2-1.0-0:amd64 (1.40.5-1) ... Setting up libgl1-mesa-glx:amd64 (13.0.6-1+b2) ... Setting up emboss (6.6.0+dfsg-6) ... Setting up librest-0.7-0:amd64 (0.8.0-2) ... Setting up at-spi2-core (2.22.0-6+deb9u1) ... Setting up x11-utils (7.7+3+b1) ... Setting up libpangocairo-1.0-0:amd64 (1.40.5-1) ... Setting up libpulse0:amd64 (10.0-1+deb9u1) ... Setting up libatk-wrapper-java (0.33.3-13+deb9u1) ... Setting up libgvc6 (2.38.0-17) ... Setting up librsvg2-2:amd64 (2.40.16-1+b1) ... Setting up librsvg2-common:amd64 (2.40.16-1+b1) ... Setting up adwaita-icon-theme (3.22.0-1+deb9u1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up graphviz (2.38.0-17) ... Setting up libgtk2.0-0:amd64 (2.24.31-2) ... Setting up libgail18:amd64 (2.24.31-2) ... Setting up libgail-common:amd64 (2.24.31-2) ... Setting up gnome-icon-theme (3.12.0-2) ... update-alternatives: using /usr/share/icons/gnome/scalable/places/debian-swirl.svg to provide /usr/share/icons/gnome/scalable/places/start-here.svg (start-here.svg) in auto mode Setting up libgtk-3-0:amd64 (3.22.11-1) ... Setting up libgtk-3-bin (3.22.11-1) ... Setting up libatk-wrapper-java-jni:amd64 (0.33.3-13+deb9u1) ... Setting up python-pygraphviz (1.4~rc1-1) ... Setting up libgtk2.0-bin (2.24.31-2) ... Setting up mobyle (1.5.5+dfsg-2) ... apache2_invoke: Enable module rewrite invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. apache2_invoke: Enable module headers invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. apache2_invoke alias: already enabled invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. apache2_invoke: Enable configuration mobyle invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of reload. Setting up mobyle-programs (5.1.2-1) ... Setting up mobyle-tutorials (1.5.0-2) ... Setting up openjdk-8-jre-headless:amd64 (8u252-b09-1~deb9u1) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/orbd to provide /usr/bin/orbd (orbd) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/servertool to provide /usr/bin/servertool (servertool) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/tnameserv to provide /usr/bin/tnameserv (tnameserv) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up ca-certificates-java (20170929~deb9u3) ... Adding debian:ssl-cert-snakeoil.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:Trustis_FPS_Root_CA.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:TrustCor_ECA-1.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Taiwan_GRCA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:Sonera_Class_2_Root_CA.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Secure_Global_CA.pem Adding debian:SecureTrust_CA.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:LuxTrust_Global_Root_2.pem Adding debian:Izenpe.com.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:ISRG_Root_X1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Global_Chambersign_Root_-_2008.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GeoTrust_Universal_CA_2.pem Adding debian:GTS_Root_R4.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R1.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:EE_Certification_Centre_Root_CA.pem Adding debian:EC-ACC.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DST_Root_CA_X3.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:Chambers_of_Commerce_Root_-_2008.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certigna.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:ACCVRAIZ1.pem done. Setting up openjdk-8-jre:amd64 (8u252-b09-1~deb9u1) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/policytool to provide /usr/bin/policytool (policytool) in auto mode Setting up ant (1.9.9-1+deb9u1) ... Setting up default-jre-headless (2:1.8-58+deb9u1) ... Setting up default-jre (2:1.8-58+deb9u1) ... Setting up ant-optional (1.9.9-1+deb9u1) ... Setting up libmsv-java (2009.1+dfsg1-5) ... Setting up libdom4j-java (1.6.1+dfsg.3-2+deb9u1) ... Setting up libsaxonhe-java (9.5.1.1+dfsg-2) ... Setting up libjing-java (20131210+dfsg+1-6) ... Setting up jing (20131210+dfsg+1-6) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... Processing triggers for sgml-base (1.29) ... Processing triggers for ca-certificates (20200601~deb9u1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.36.5-2+deb9u2) ... 1m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', '-y', 'install', 'mobyle-programs=5.1.2-1'] 1m2.3s INFO: Running scripts post_install 1m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_install_exceptions'] 1m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_install_exceptions'] 1m2.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 1m3.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 1m6.8s ERROR: WARN: Broken symlinks: /usr/lib/debug/usr/lib/jvm/java-1.8.0-openjdk-amd64 -> java-8-openjdk-amd64 (openjdk-8-jre-headless:amd64) 1m8.8s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', '-ac', '--ignore-obsolete'] 1m12.7s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', '-ac', '--ignore-obsolete'] 1m12.7s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m12.7s DUMP: 0.15.6 1m12.7s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m12.7s INFO: Running adequate version 0.15.6 now. 1m12.7s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'mobyle-programs'] 1m12.7s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'mobyle-programs'] 1m12.7s INFO: Running scripts pre_remove 1m12.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m12.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m12.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m12.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m12.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m18.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_exceptions'] 1m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/pre_remove_exceptions'] 1m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m18.5s DUMP: install ok installed adduser adduser 3.115 install ok installed adwaita-icon-theme adwaita-icon-theme 3.22.0-1+deb9u1 install ok installed ant ant 1.9.9-1+deb9u1 install ok installed ant-optional ant-optional 1.9.9-1+deb9u1 install ok installed apache2 apache2 2.4.25-3+deb9u9 install ok installed apache2-bin apache2-bin 2.4.25-3+deb9u9 install ok installed apache2-data apache2-data 2.4.25-3+deb9u9 install ok installed apache2-utils apache2-utils 2.4.25-3+deb9u9 install ok installed apt apt 1.4.10 install ok installed at-spi2-core at-spi2-core 2.22.0-6+deb9u1 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed bzip2 bzip2 1.0.6-8.1 install ok installed ca-certificates ca-certificates 20200601~deb9u1 install ok installed ca-certificates-java ca-certificates-java 20170929~deb9u3 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed dbus dbus 1.10.32-0+deb9u1 install ok installed dconf-gsettings-backend:amd64 dconf-gsettings-backend 0.26.0-2+b1 install ok installed dconf-service dconf-service 0.26.0-2+b1 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u1 install ok installed debianutils debianutils 4.8.1.1 install ok installed default-jre default-jre 2:1.8-58+deb9u1 install ok installed default-jre-headless default-jre-headless 2:1.8-58+deb9u1 install ok installed dialign dialign 2.2.1-8 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.25 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u1 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u1 install ok installed emboss emboss 6.6.0+dfsg-6 install ok installed emboss-data emboss-data 6.6.0+dfsg-6 install ok installed emboss-lib emboss-lib 6.6.0+dfsg-6 install ok installed file file 1:5.30-1+deb9u3 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed fontconfig fontconfig 2.11.0-6.7+b1 install ok installed fontconfig-config fontconfig-config 2.11.0-6.7 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-1 install ok installed fonts-dejavu-extra fonts-dejavu-extra 2.37-1 install ok installed fonts-liberation fonts-liberation 1:1.07.4-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed glib-networking:amd64 glib-networking 2.50.0-1+deb9u1 install ok installed glib-networking-common glib-networking-common 2.50.0-1+deb9u1 install ok installed glib-networking-services glib-networking-services 2.50.0-1+deb9u1 install ok installed gnome-icon-theme gnome-icon-theme 3.12.0-2 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed graphviz graphviz 2.38.0-17 install ok installed grep grep 2.27-2 install ok installed gsettings-desktop-schemas gsettings-desktop-schemas 3.22.0-1 install ok installed gsfonts gsfonts 1:8.11+urwcyr1.0.7~pre44-4.3 install ok installed gtk-update-icon-cache gtk-update-icon-cache 3.22.11-1 install ok installed gzip gzip 1.6-5+b1 install ok installed hicolor-icon-theme hicolor-icon-theme 0.15-1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed java-common java-common 0.58+deb9u1 install ok installed java-wrappers java-wrappers 0.1.28 install ok installed javascript-common javascript-common 11 install ok installed jing jing 20131210+dfsg+1-6 install ok installed krb5-locales krb5-locales 1.15-1+deb9u1 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libann0 libann0 1.1.2+doc-6 install ok installed libapparmor1:amd64 libapparmor1 2.11.0-3+deb9u2 install ok installed libapr1:amd64 libapr1 1.5.2-5 install ok installed libaprutil1:amd64 libaprutil1 1.5.4-3 install ok installed libaprutil1-dbd-sqlite3:amd64 libaprutil1-dbd-sqlite3 1.5.4-3 install ok installed libaprutil1-ldap:amd64 libaprutil1-ldap 1.5.4-3 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.10 install ok installed libart-2.0-2:amd64 libart-2.0-2 2.3.21-2 install ok installed libasound2:amd64 libasound2 1.1.3-5 install ok installed libasound2-data libasound2-data 1.1.3-5 install ok installed libasyncns0:amd64 libasyncns0 0.8-6 install ok installed libatk-bridge2.0-0:amd64 libatk-bridge2.0-0 2.22.0-2 install ok installed libatk-wrapper-java libatk-wrapper-java 0.33.3-13+deb9u1 install ok installed libatk-wrapper-java-jni:amd64 libatk-wrapper-java-jni 0.33.3-13+deb9u1 install ok installed libatk1.0-0:amd64 libatk1.0-0 2.22.0-1 install ok installed libatk1.0-data libatk1.0-data 2.22.0-1 install ok installed libatspi2.0-0:amd64 libatspi2.0-0 2.22.0-6+deb9u1 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libavahi-client3:amd64 libavahi-client3 0.6.32-2 install ok installed libavahi-common-data:amd64 libavahi-common-data 0.6.32-2 install ok installed libavahi-common3:amd64 libavahi-common3 0.6.32-2 install ok installed libblas-common libblas-common 3.7.0-2 install ok installed libblas3 libblas3 3.7.0-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbsd0:amd64 libbsd0 0.8.3-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcairo-gobject2:amd64 libcairo-gobject2 1.14.8-1 install ok installed libcairo2:amd64 libcairo2 1.14.8-1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcap2:amd64 libcap2 1:2.25-1 install ok installed libcdt5 libcdt5 2.38.0-17 install ok installed libcgraph6 libcgraph6 2.38.0-17 install ok installed libcolord2:amd64 libcolord2 1.3.3-2 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u1 install ok installed libcroco3:amd64 libcroco3 0.6.11-3 install ok installed libcups2:amd64 libcups2 2.2.1-8+deb9u6 install ok installed libdatrie1:amd64 libdatrie1 0.2.10-4+b1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdbus-1-3:amd64 libdbus-1-3 1.10.32-0+deb9u1 install ok installed libdconf1:amd64 libdconf1 0.26.0-2+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libdom4j-java libdom4j-java 1.6.1+dfsg.3-2+deb9u1 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.74-1 install ok installed libdrm-intel1:amd64 libdrm-intel1 2.4.74-1 install ok installed libdrm-nouveau2:amd64 libdrm-nouveau2 2.4.74-1 install ok installed libdrm-radeon1:amd64 libdrm-radeon1 2.4.74-1 install ok installed libdrm2:amd64 libdrm2 2.4.74-1 install ok installed libedit2:amd64 libedit2 3.1-20160903-3 install ok installed libegl1-mesa:amd64 libegl1-mesa 13.0.6-1+b2 install ok installed libelf1:amd64 libelf1 0.168-1 install ok installed libepoxy0:amd64 libepoxy0 1.3.1-2 install ok installed libexpat1:amd64 libexpat1 2.2.0-2+deb9u3 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libffi6:amd64 libffi6 3.2.1-6 install ok installed libflac8:amd64 libflac8 1.3.2-1 install ok installed libfontconfig1:amd64 libfontconfig1 2.11.0-6.7+b1 install ok installed libfontenc1:amd64 libfontenc1 1:1.1.3-1+b2 install ok installed libfreetype6:amd64 libfreetype6 2.6.3-3.2+deb9u1 install ok installed libgail-common:amd64 libgail-common 2.24.31-2 install ok installed libgail18:amd64 libgail18 2.24.31-2 install ok installed libgbm1:amd64 libgbm1 13.0.6-1+b2 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u3 install ok installed libgd3:amd64 libgd3 2.2.4-2+deb9u5 install ok installed libgdbm3:amd64 libgdbm3 1.8.3-14 install ok installed libgdk-pixbuf2.0-0:amd64 libgdk-pixbuf2.0-0 2.36.5-2+deb9u2 install ok installed libgdk-pixbuf2.0-common libgdk-pixbuf2.0-common 2.36.5-2+deb9u2 install ok installed libgfortran3:amd64 libgfortran3 6.3.0-18+deb9u1 install ok installed libgif7:amd64 libgif7 5.1.4-0.4 install ok installed libgl1-mesa-dri:amd64 libgl1-mesa-dri 13.0.6-1+b2 install ok installed libgl1-mesa-glx:amd64 libgl1-mesa-glx 13.0.6-1+b2 install ok installed libglapi-mesa:amd64 libglapi-mesa 13.0.6-1+b2 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.50.3-2+deb9u2 install ok installed libglib2.0-data libglib2.0-data 2.50.3-2+deb9u2 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-1 install ok installed libgnutls30:amd64 libgnutls30 3.5.8-5+deb9u5 install ok installed libgomp1:amd64 libgomp1 6.3.0-18+deb9u1 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed libgpm2:amd64 libgpm2 1.20.4-6.2+b1 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.10-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.15-1+deb9u1 install ok installed libgtk-3-0:amd64 libgtk-3-0 3.22.11-1 install ok installed libgtk-3-bin libgtk-3-bin 3.22.11-1 install ok installed libgtk-3-common libgtk-3-common 3.22.11-1 install ok installed libgtk2.0-0:amd64 libgtk2.0-0 2.24.31-2 install ok installed libgtk2.0-bin libgtk2.0-bin 2.24.31-2 install ok installed libgtk2.0-common libgtk2.0-common 2.24.31-2 install ok installed libgts-0.7-5:amd64 libgts-0.7-5 0.7.6+darcs121130-4 install ok installed libgts-bin libgts-bin 0.7.6+darcs121130-4 install ok installed libgvc6 libgvc6 2.38.0-17 install ok installed libgvpr2 libgvpr2 2.38.0-17 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 1.4.2-1 install ok installed libhogweed4:amd64 libhogweed4 3.3-1+b2 install ok installed libhpdf-2.2.1 libhpdf-2.2.1 2.2.1-1.1+b1 install ok installed libice6:amd64 libice6 2:1.0.9-2 install ok installed libicu57:amd64 libicu57 57.1-6+deb9u4 install ok installed libidn11:amd64 libidn11 1.33-1+deb9u1 install ok installed libisorelax-java libisorelax-java 20041111-9 install ok installed libjaxen-java libjaxen-java 1.1.6-1+deb9u1 install ok installed libjaxp1.3-java libjaxp1.3-java 1.3.05-2 install ok installed libjbig0:amd64 libjbig0 2.1-3.1+b2 install ok installed libjdom1-java libjdom1-java 1.1.3-1 install ok installed libjing-java libjing-java 20131210+dfsg+1-6 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:1.5.1-2 install ok installed libjs-jquery libjs-jquery 3.1.1-2+deb9u1 install ok installed libjs-prototype libjs-prototype 1.7.1-3 install ok installed libjs-scriptaculous libjs-scriptaculous 1.9.0-2 install ok installed libjson-glib-1.0-0:amd64 libjson-glib-1.0-0 1.2.6-1 install ok installed libjson-glib-1.0-common libjson-glib-1.0-common 1.2.6-1 install ok installed libk5crypto3:amd64 libk5crypto3 1.15-1+deb9u1 install ok installed libkeyutils1:amd64 libkeyutils1 1.5.9-9 install ok installed libkrb5-3:amd64 libkrb5-3 1.15-1+deb9u1 install ok installed libkrb5support0:amd64 libkrb5support0 1.15-1+deb9u1 install ok installed liblapack3 liblapack3 3.7.0-2 install ok installed liblcms2-2:amd64 liblcms2-2 2.8-4+deb9u1 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.44+dfsg-5+deb9u4 install ok installed libldap-common libldap-common 2.4.44+dfsg-5+deb9u4 install ok installed libllvm3.9:amd64 libllvm3.9 1:3.9.1-9 install ok installed libltdl7:amd64 libltdl7 2.4.6-2 install ok installed liblua5.2-0:amd64 liblua5.2-0 5.2.4-1.1+b2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+b1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+b1 install ok installed libmagic-mgc libmagic-mgc 1:5.30-1+deb9u3 install ok installed libmagic1:amd64 libmagic1 1:5.30-1+deb9u3 install ok installed libmariadbclient18:amd64 libmariadbclient18 10.1.45-0+deb9u1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libmsv-java libmsv-java 2009.1+dfsg1-5 install ok installed libncurses5:amd64 libncurses5 6.0+20161126-1+deb9u2 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libnettle6:amd64 libnettle6 3.3-1+b2 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.18.1-1+deb9u1 install ok installed libnspr4:amd64 libnspr4 2:4.12-6 install ok installed libnss3:amd64 libnss3 2:3.26.2-1.1+deb9u1 install ok installed libogg0:amd64 libogg0 1.3.2-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.3-2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.40.5-1 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.40.5-1 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.40.5-1 install ok installed libpathplan4 libpathplan4 2.38.0-17 install ok installed libpciaccess0:amd64 libpciaccess0 0.13.4-1+b2 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libpcsclite1:amd64 libpcsclite1 1.8.20-1 install ok installed libperl5.24:amd64 libperl5.24 5.24.1-3+deb9u7 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.34.0-1 install ok installed libpng16-16:amd64 libpng16-16 1.6.28-1+deb9u1 install ok installed libpq5:amd64 libpq5 9.6.17-0+deb9u1 install ok installed libprocps6:amd64 libprocps6 2:3.3.12-3+deb9u1 install ok installed libproxy1v5:amd64 libproxy1v5 0.4.14-2 install ok installed libpulse0:amd64 libpulse0 10.0-1+deb9u1 install ok installed libpython-stdlib:amd64 libpython-stdlib 2.7.13-2 install ok installed libpython2.7-minimal:amd64 libpython2.7-minimal 2.7.13-2+deb9u3 install ok installed libpython2.7-stdlib:amd64 libpython2.7-stdlib 2.7.13-2+deb9u3 install ok installed libquadmath0:amd64 libquadmath0 6.3.0-18+deb9u1 install ok installed libreadline7:amd64 libreadline7 7.0-3 install ok installed librelaxng-datatype-java librelaxng-datatype-java 1.0+ds1-3 install ok installed librest-0.7-0:amd64 librest-0.7-0 0.8.0-2 install ok installed librsvg2-2:amd64 librsvg2-2 2.40.16-1+b1 install ok installed librsvg2-common:amd64 librsvg2-common 2.40.16-1+b1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.27~101-g0780600+dfsg-3+deb9u1 install ok installed libsasl2-modules:amd64 libsasl2-modules 2.1.27~101-g0780600+dfsg-3+deb9u1 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.27~101-g0780600+dfsg-3+deb9u1 install ok installed libsaxon-java libsaxon-java 1:6.5.5-10 install ok installed libsaxonhe-java libsaxonhe-java 9.5.1.1+dfsg-2 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsensors4:amd64 libsensors4 1:3.4.0-4 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsm6:amd64 libsm6 2:1.2.2-1+b3 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libsndfile1:amd64 libsndfile1 1.0.27-3 install ok installed libsoup-gnome2.4-1:amd64 libsoup-gnome2.4-1 2.56.0-2+deb9u2 install ok installed libsoup2.4-1:amd64 libsoup2.4-1 2.56.0-2+deb9u2 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.16.2-5+deb9u1 install ok installed libsquizz libsquizz 0.99c+dfsg-1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u1 install ok installed libssl1.0.2:amd64 libssl1.0.2 1.0.2u-1~deb9u1 install ok installed libssl1.1:amd64 libssl1.1 1.1.0l-1~deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u12 install ok installed libtasn1-6:amd64 libtasn1-6 4.10-1.1+deb9u1 install ok installed libthai-data libthai-data 0.1.26-1 install ok installed libthai0:amd64 libthai0 0.1.26-1 install ok installed libtiff5:amd64 libtiff5 4.0.8-2+deb9u5 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libtxc-dxtn-s2tc:amd64 libtxc-dxtn-s2tc 1.0+git20151227-2 install ok installed libudev1:amd64 libudev1 232-25+deb9u12 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed libvorbis0a:amd64 libvorbis0a 1.3.5-4+deb9u2 install ok installed libvorbisenc2:amd64 libvorbisenc2 1.3.5-4+deb9u2 install ok installed libwayland-client0:amd64 libwayland-client0 1.12.0-1+deb9u1 install ok installed libwayland-cursor0:amd64 libwayland-cursor0 1.12.0-1+deb9u1 install ok installed libwayland-egl1-mesa:amd64 libwayland-egl1-mesa 13.0.6-1+b2 install ok installed libwayland-server0:amd64 libwayland-server0 1.12.0-1+deb9u1 install ok installed libwebp6:amd64 libwebp6 0.5.2-1 install ok installed libwebpdemux2:amd64 libwebpdemux2 0.5.2-1 install ok installed libwebpmux2:amd64 libwebpmux2 0.5.2-1 install ok installed libwrap0:amd64 libwrap0 7.6.q-26 install ok installed libx11-6:amd64 libx11-6 2:1.6.4-3+deb9u1 install ok installed libx11-data libx11-data 2:1.6.4-3+deb9u1 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.6.4-3+deb9u1 install ok installed libxalan2-java libxalan2-java 2.7.1-9 install ok installed libxau6:amd64 libxau6 1:1.0.8-1 install ok installed libxaw7:amd64 libxaw7 2:1.0.13-1+b2 install ok installed libxcb-dri2-0:amd64 libxcb-dri2-0 1.12-1 install ok installed libxcb-dri3-0:amd64 libxcb-dri3-0 1.12-1 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.12-1 install ok installed libxcb-present0:amd64 libxcb-present0 1.12-1 install ok installed libxcb-render0:amd64 libxcb-render0 1.12-1 install ok installed libxcb-shape0:amd64 libxcb-shape0 1.12-1 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.12-1 install ok installed libxcb-sync1:amd64 libxcb-sync1 1.12-1 install ok installed libxcb-xfixes0:amd64 libxcb-xfixes0 1.12-1 install ok installed libxcb1:amd64 libxcb1 1.12-1 install ok installed libxcomposite1:amd64 libxcomposite1 1:0.4.4-2 install ok installed libxcursor1:amd64 libxcursor1 1:1.1.14-1+deb9u2 install ok installed libxdamage1:amd64 libxdamage1 1:1.1.4-2+b3 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxdot4 libxdot4 2.38.0-17 install ok installed libxerces2-java libxerces2-java 2.11.0-7 install ok installed libxext6:amd64 libxext6 2:1.3.3-1+b2 install ok installed libxfixes3:amd64 libxfixes3 1:5.0.3-1 install ok installed libxft2:amd64 libxft2 2.3.2-1+b2 install ok installed libxi6:amd64 libxi6 2:1.7.9-1 install ok installed libxinerama1:amd64 libxinerama1 2:1.1.3-1+b3 install ok installed libxkbcommon0:amd64 libxkbcommon0 0.7.1-2~deb9u1 install ok installed libxml-commons-external-java libxml-commons-external-java 1.4.01-2 install ok installed libxml-commons-resolver1.1-java libxml-commons-resolver1.1-java 1.2-7 install ok installed libxml2:amd64 libxml2 2.9.4+dfsg1-2.2+deb9u2 install ok installed libxmu6:amd64 libxmu6 2:1.1.2-2 install ok installed libxmuu1:amd64 libxmuu1 2:1.1.2-2 install ok installed libxom-java libxom-java 1.2.10-1 install ok installed libxpm4:amd64 libxpm4 1:3.5.12-1 install ok installed libxpp2-java libxpp2-java 2.1.10-7 install ok installed libxpp3-java libxpp3-java 1.1.4c-2 install ok installed libxrandr2:amd64 libxrandr2 2:1.5.1-1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1 install ok installed libxshmfence1:amd64 libxshmfence1 1.2-1+b2 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.29-2.1+deb9u2 install ok installed libxt6:amd64 libxt6 1:1.1.5-1 install ok installed libxtst6:amd64 libxtst6 2:1.2.3-1 install ok installed libxv1:amd64 libxv1 2:1.0.11-1 install ok installed libxxf86dga1:amd64 libxxf86dga1 2:1.1.4-1+b3 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.4-1+b2 install ok installed login login 1:4.4-4.1 install ok installed lsb-base lsb-base 9.20161125 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mime-support mime-support 3.60 install ok installed mobyle mobyle 1.5.5+dfsg-2 install ok installed mobyle-programs mobyle-programs 5.1.2-1 install ok installed mobyle-tutorials mobyle-tutorials 1.5.0-2 install ok installed mobyle-utils mobyle-utils 1.5.5+dfsg-2 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed mysql-common mysql-common 5.8+1.0.2 install ok installed ncbi-blast+ ncbi-blast+ 2.6.0-1 install ok installed ncbi-data ncbi-data 6.1.20170106+dfsg1-0+deb9u1 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed netbase netbase 5.4 install ok installed openjdk-8-jre:amd64 openjdk-8-jre 8u252-b09-1~deb9u1 install ok installed openjdk-8-jre-headless:amd64 openjdk-8-jre-headless 8u252-b09-1~deb9u1 install ok installed openssl openssl 1.1.0l-1~deb9u1 install ok installed passwd passwd 1:4.4-4.1 install ok installed perl perl 5.24.1-3+deb9u7 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed perl-modules-5.24 perl-modules-5.24 5.24.1-3+deb9u7 install ok installed primer3 primer3 2.3.7-3 install ok installed procps procps 2:3.3.12-3+deb9u1 install ok installed psmisc psmisc 22.21-2.1+b2 install ok installed python python 2.7.13-2 install ok installed python-biopython python-biopython 1.68+dfsg-3 install ok installed python-biopython-doc python-biopython-doc 1.68+dfsg-3 install ok installed python-bs4 python-bs4 4.5.3-1 install ok installed python-chardet python-chardet 2.3.0-2 install ok installed python-html5lib python-html5lib 0.999999999-1 install ok installed python-imaging python-imaging 4.0.0-4+deb9u1 install ok installed python-lxml python-lxml 3.7.1-1 install ok installed python-minimal python-minimal 2.7.13-2 install ok installed python-numpy python-numpy 1:1.12.1-3 install ok installed python-pil:amd64 python-pil 4.0.0-4+deb9u1 install ok installed python-pkg-resources python-pkg-resources 33.1.1-1 install ok installed python-pygraphviz python-pygraphviz 1.4~rc1-1 install ok installed python-renderpm:amd64 python-renderpm 3.3.0-2+deb9u1 install ok installed python-reportlab python-reportlab 3.3.0-2+deb9u1 install ok installed python-reportlab-accel:amd64 python-reportlab-accel 3.3.0-2+deb9u1 install ok installed python-simplejson python-simplejson 3.10.0-1 install ok installed python-simpletal python-simpletal 4.1-9 install ok installed python-six python-six 1.10.0-3 install ok installed python-webencodings python-webencodings 0.5-2 install ok installed python2.7 python2.7 2.7.13-2+deb9u3 install ok installed python2.7-minimal python2.7-minimal 2.7.13-2+deb9u3 install ok installed readline-common readline-common 7.0-3 install ok installed rename rename 0.20-4 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sgml-base sgml-base 1.29 install ok installed shared-mime-info shared-mime-info 1.8-1+deb9u1 install ok installed squizz squizz 0.99c+dfsg-1 install ok installed ssl-cert ssl-cert 1.0.39 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1 install ok installed tcpd tcpd 7.6.q-26 install ok installed ttf-bitstream-vera ttf-bitstream-vera 1.10-8 install ok installed ucf ucf 3.0036 install ok installed unzip unzip 6.0-21+deb9u2 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed x11-common x11-common 1:7.7+19 install ok installed x11-utils x11-utils 7.7+3+b1 install ok installed xdg-user-dirs xdg-user-dirs 0.15-2+b1 install ok installed xkb-data xkb-data 2.19-1+deb9u1 install ok installed xml-core xml-core 0.17 install ok installed xz-utils xz-utils 5.2.2-1.2+b1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5 1m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', 'remove', 'adwaita-icon-theme', 'ant', 'ant-optional', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'at-spi2-core', 'bzip2', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'dialign', 'emboss', 'emboss-data', 'emboss-lib', 'file', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-liberation', 'glib-networking:amd64', 'glib-networking-common', 'glib-networking-services', 'gnome-icon-theme', 'graphviz', 'gsettings-desktop-schemas', 'gsfonts', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'java-common', 'java-wrappers', 'javascript-common', 'jing', 'krb5-locales', 'libann0', 'libapparmor1:amd64', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libart-2.0-2:amd64', 'libasound2:amd64', 'libasound2-data', 'libasyncns0:amd64', 'libatk-bridge2.0-0:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0:amd64', 'libatk1.0-data', 'libatspi2.0-0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas-common', 'libblas3', 'libbsd0:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcdt5', 'libcgraph6', 'libcolord2:amd64', 'libcroco3:amd64', 'libcups2:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdom4j-java', 'libdrm-amdgpu1:amd64', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libegl1-mesa:amd64', 'libelf1:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libffi6:amd64', 'libflac8:amd64', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libgail-common:amd64', 'libgail18:amd64', 'libgbm1:amd64', 'libgd3:amd64', 'libgdbm3:amd64', 'libgdk-pixbuf2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran3:amd64', 'libgif7:amd64', 'libgl1-mesa-dri:amd64', 'libgl1-mesa-glx:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglib2.0-data', 'libgmp10:amd64', 'libgnutls30:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgtk2.0-0:amd64', 'libgtk2.0-bin', 'libgtk2.0-common', 'libgts-0.7-5:amd64', 'libgts-bin', 'libgvc6', 'libgvpr2', 'libharfbuzz0b:amd64', 'libhogweed4:amd64', 'libhpdf-2.2.1', 'libice6:amd64', 'libicu57:amd64', 'libidn11:amd64', 'libisorelax-java', 'libjaxen-java', 'libjaxp1.3-java', 'libjbig0:amd64', 'libjdom1-java', 'libjing-java', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-prototype', 'libjs-scriptaculous', 'libjson-glib-1.0-0:amd64', 'libjson-glib-1.0-common', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3', 'liblcms2-2:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libllvm3.9:amd64', 'libltdl7:amd64', 'liblua5.2-0:amd64', 'libmagic-mgc', 'libmagic1:amd64', 'libmariadbclient18:amd64', 'libmsv-java', 'libncurses5:amd64', 'libnettle6:amd64', 'libnghttp2-14:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libogg0:amd64', 'libp11-kit0:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpathplan4', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.24:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libprocps6:amd64', 'libproxy1v5:amd64', 'libpulse0:amd64', 'libpython-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'libreadline7:amd64', 'librelaxng-datatype-java', 'librest-0.7-0:amd64', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsaxon-java', 'libsaxonhe-java', 'libsensors4:amd64', 'libsm6:amd64', 'libsndfile1:amd64', 'libsoup-gnome2.4-1:amd64', 'libsoup2.4-1:amd64', 'libsqlite3-0:amd64', 'libsquizz', 'libssl1.0.2:amd64', 'libssl1.1:amd64', 'libtasn1-6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtxc-dxtn-s2tc:amd64', 'libvorbis0a:amd64', 'libvorbisenc2:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1-mesa:amd64', 'libwayland-server0:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux2:amd64', 'libwrap0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxalan2-java', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxdot4', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2:amd64', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxom-java', 'libxpm4:amd64', 'libxpp2-java', 'libxpp3-java', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxt6:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'lsb-base', 'mime-support', 'mobyle', 'mobyle-tutorials', 'mobyle-utils', 'mysql-common', 'ncbi-blast+-', 'ncbi-data', 'netbase', 'openjdk-8-jre:amd64', 'openjdk-8-jre-headless:amd64', 'openssl', 'perl', 'perl-modules-5.24', 'primer3', 'procps', 'psmisc', 'python', 'python-biopython', 'python-biopython-doc', 'python-bs4', 'python-chardet', 'python-html5lib', 'python-imaging', 'python-lxml', 'python-minimal', 'python-numpy', 'python-pil:amd64', 'python-pkg-resources', 'python-pygraphviz', 'python-renderpm:amd64', 'python-reportlab', 'python-reportlab-accel:amd64', 'python-simplejson', 'python-simpletal', 'python-six', 'python-webencodings', 'python2.7', 'python2.7-minimal', 'readline-common', 'rename', 'sgml-base', 'shared-mime-info', 'squizz', 'ssl-cert', 'tcpd', 'ttf-bitstream-vera', 'ucf', 'unzip', 'x11-common', 'x11-utils', 'xdg-user-dirs', 'xkb-data', 'xml-core', 'xz-utils', 'mobyle-programs'] 1m22.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: adwaita-icon-theme ant ant-optional apache2 apache2-bin apache2-data apache2-utils at-spi2-core bzip2 ca-certificates ca-certificates-java dbus dconf-gsettings-backend dconf-service default-jre default-jre-headless dialign emboss emboss-data emboss-lib file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-liberation glib-networking glib-networking-common glib-networking-services gnome-icon-theme graphviz gsettings-desktop-schemas gsfonts gtk-update-icon-cache hicolor-icon-theme java-common java-wrappers javascript-common jing krb5-locales libann0 libapparmor1 libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libart-2.0-2 libasound2 libasound2-data libasyncns0 libatk-bridge2.0-0 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblas-common libblas3 libbsd0 libcairo-gobject2 libcairo2 libcap2 libcdt5 libcgraph6 libcolord2 libcroco3 libcups2 libdatrie1 libdbus-1-3 libdconf1 libdom4j-java libdrm-amdgpu1 libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl1-mesa libelf1 libepoxy0 libexpat1 libffi6 libflac8 libfontconfig1 libfontenc1 libfreetype6 libgail-common libgail18 libgbm1 libgd3 libgdbm3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran3 libgif7 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglib2.0-data libgmp10 libgnutls30 libgomp1 libgpm2 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0 libgtk-3-bin libgtk-3-common libgtk2.0-0 libgtk2.0-bin libgtk2.0-common libgts-0.7-5 libgts-bin libgvc6 libgvpr2 libharfbuzz0b libhogweed4 libhpdf-2.2.1 libice6 libicu57 libidn11 libisorelax-java libjaxen-java libjaxp1.3-java libjbig0 libjdom1-java libjing-java libjpeg62-turbo libjs-jquery libjs-prototype libjs-scriptaculous libjson-glib-1.0-0 libjson-glib-1.0-common libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm3.9 libltdl7 liblua5.2-0 libmagic-mgc libmagic1 libmariadbclient18 libmsv-java libncurses5 libnettle6 libnghttp2-14 libnspr4 libnss3 libogg0 libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpciaccess0 libpcsclite1 libperl5.24 libpixman-1-0 libpng16-16 libpq5 libprocps6 libproxy1v5 libpulse0 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libquadmath0 libreadline7 librelaxng-datatype-java librest-0.7-0 librsvg2-2 librsvg2-common libsasl2-2 libsasl2-modules libsasl2-modules-db libsaxon-java libsaxonhe-java libsensors4 libsm6 libsndfile1 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-0 libsquizz libssl1.0.2 libssl1.1 libtasn1-6 libthai-data libthai0 libtiff5 libtxc-dxtn-s2tc libvorbis0a libvorbisenc2 libwayland-client0 libwayland-cursor0 libwayland-egl1-mesa libwayland-server0 libwebp6 libwebpdemux2 libwebpmux2 libwrap0 libx11-6 libx11-data libx11-xcb1 libxalan2-java libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxmu6 libxmuu1 libxom-java libxpm4 libxpp2-java libxpp3-java libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxt6 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 lsb-base mime-support mobyle mobyle-programs mobyle-tutorials mobyle-utils mysql-common ncbi-blast+ ncbi-data netbase openjdk-8-jre openjdk-8-jre-headless openssl perl perl-modules-5.24 primer3 procps psmisc python python-biopython python-biopython-doc python-bs4 python-chardet python-html5lib python-imaging python-lxml python-minimal python-numpy python-pil python-pkg-resources python-pygraphviz python-renderpm python-reportlab python-reportlab-accel python-simplejson python-simpletal python-six python-webencodings python2.7 python2.7-minimal readline-common rename sgml-base shared-mime-info squizz ssl-cert tcpd ttf-bitstream-vera ucf unzip x11-common x11-utils xdg-user-dirs xkb-data xml-core xz-utils 0 upgraded, 0 newly installed, 312 to remove and 0 not upgraded. After this operation, 1264 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 32197 files and directories currently installed.) Removing jing (20131210+dfsg+1-6) ... Removing default-jre (2:1.8-58+deb9u1) ... Removing openjdk-8-jre:amd64 (8u252-b09-1~deb9u1) ... Removing libatk-wrapper-java-jni:amd64 (0.33.3-13+deb9u1) ... Removing libgtk-3-bin (3.22.11-1) ... Removing libgtk-3-0:amd64 (3.22.11-1) ... Removing libgtk2.0-bin (2.24.31-2) ... Removing adwaita-icon-theme (3.22.0-1+deb9u1) ... Removing libjing-java (20131210+dfsg+1-6) ... Removing libsaxonhe-java (9.5.1.1+dfsg-2) ... Removing libdom4j-java (1.6.1+dfsg.3-2+deb9u1) ... Removing libmsv-java (2009.1+dfsg1-5) ... Removing ant-optional (1.9.9-1+deb9u1) ... Removing ant (1.9.9-1+deb9u1) ... Removing mobyle-tutorials (1.5.0-2) ... Removing mobyle-programs (5.1.2-1) ... Removing mobyle (1.5.5+dfsg-2) ... Conf mobyle disabled. apache2_invoke prerm: Disable configuration mobyle invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of reload. Removing apache2 (2.4.25-3+deb9u9) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing apache2-bin (2.4.25-3+deb9u9) ... dpkg: warning: while removing apache2-bin, directory '/var/lib/apache2' not empty so not removed Removing apache2-data (2.4.25-3+deb9u9) ... Removing apache2-utils (2.4.25-3+deb9u9) ... Removing at-spi2-core (2.22.0-6+deb9u1) ... Removing bzip2 (1.0.6-8.1) ... Removing default-jre-headless (2:1.8-58+deb9u1) ... Removing dbus (1.10.32-0+deb9u1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libgtk-3-common (3.22.11-1) ... Removing librest-0.7-0:amd64 (0.8.0-2) ... Removing libsoup-gnome2.4-1:amd64 (2.56.0-2+deb9u2) ... Removing libsoup2.4-1:amd64 (2.56.0-2+deb9u2) ... Removing glib-networking:amd64 (2.50.0-1+deb9u1) ... Removing gsettings-desktop-schemas (3.22.0-1) ... Removing dconf-gsettings-backend:amd64 (0.26.0-2+b1) ... Removing dconf-service (0.26.0-2+b1) ... Removing dialign (2.2.1-8) ... Removing emboss (6.6.0+dfsg-6) ... Removing emboss-data (6.6.0+dfsg-6) ... Removing emboss-lib (6.6.0+dfsg-6) ... Removing file (1:5.30-1+deb9u3) ... Removing libgail-common:amd64 (2.24.31-2) ... Removing libgail18:amd64 (2.24.31-2) ... Removing python-pygraphviz (1.4~rc1-1) ... Removing graphviz (2.38.0-17) ... Removing libgvc6 (2.38.0-17) ... Removing libatk-wrapper-java (0.33.3-13+deb9u1) ... Removing x11-utils (7.7+3+b1) ... Removing libxft2:amd64 (2.3.2-1+b2) ... Removing libgd3:amd64 (2.2.4-2+deb9u5) ... Removing fonts-dejavu-extra (2.37-1) ... Removing fonts-dejavu-core (2.37-1) ... Removing fonts-liberation (1:1.07.4-2) ... Removing glib-networking-services (2.50.0-1+deb9u1) ... Removing glib-networking-common (2.50.0-1+deb9u1) ... Removing python-renderpm:amd64 (3.3.0-2+deb9u1) ... Removing gsfonts (1:8.11+urwcyr1.0.7~pre44-4.3) ... Removing java-wrappers (0.1.28) ... Removing javascript-common (11) ... Removing krb5-locales (1.15-1+deb9u1) ... Removing libann0 (1.1.2+doc-6) ... Removing libapparmor1:amd64 (2.11.0-3+deb9u2) ... Removing libaprutil1-ldap:amd64 (1.5.4-3) ... Removing libaprutil1-dbd-sqlite3:amd64 (1.5.4-3) ... Removing libaprutil1:amd64 (1.5.4-3) ... Removing libapr1:amd64 (1.5.2-5) ... Removing libart-2.0-2:amd64 (2.3.21-2) ... Removing libasound2:amd64 (1.1.3-5) ... Removing libasound2-data (1.1.3-5) ... Removing libpulse0:amd64 (10.0-1+deb9u1) ... Removing libasyncns0:amd64 (0.8-6) ... Removing libatk-bridge2.0-0:amd64 (2.22.0-2) ... Removing libatspi2.0-0:amd64 (2.22.0-6+deb9u1) ... Removing python-biopython (1.68+dfsg-3) ... Removing python-numpy (1:1.12.1-3) ... Removing liblapack3 (3.7.0-2) ... Removing libblas3 (3.7.0-2) ... Removing libblas-common (3.7.0-2) ... Removing libgl1-mesa-glx:amd64 (13.0.6-1+b2) ... Removing libwayland-egl1-mesa:amd64 (13.0.6-1+b2) ... Removing libegl1-mesa:amd64 (13.0.6-1+b2) ... Removing libxcb-xfixes0:amd64 (1.12-1) ... Removing libxaw7:amd64 (2:1.0.13-1+b2) ... Removing libxmu6:amd64 (2:1.1.2-2) ... Removing libxt6:amd64 (1:1.1.5-1) ... Removing libcairo-gobject2:amd64 (1.14.8-1) ... Removing libcap2:amd64 (1:2.25-1) ... Removing libgvpr2 (2.38.0-17) ... Removing libcgraph6 (2.38.0-17) ... Removing libcdt5 (2.38.0-17) ... Removing libcolord2:amd64 (1.3.3-2) ... Removing libdconf1:amd64 (0.26.0-2+b1) ... Removing libgl1-mesa-dri:amd64 (13.0.6-1+b2) ... Removing libdrm-amdgpu1:amd64 (2.4.74-1) ... Removing libdrm-intel1:amd64 (2.4.74-1) ... Removing libdrm-nouveau2:amd64 (2.4.74-1) ... Removing libdrm-radeon1:amd64 (2.4.74-1) ... Removing libgbm1:amd64 (13.0.6-1+b2) ... Removing libdrm2:amd64 (2.4.74-1) ... Removing libllvm3.9:amd64 (1:3.9.1-9) ... Removing libedit2:amd64 (3.1-20160903-3) ... Removing libelf1:amd64 (0.168-1) ... Removing libepoxy0:amd64 (1.3.1-2) ... Removing python-simplejson (3.10.0-1) ... Removing python-html5lib (0.999999999-1) ... Removing python-six (1.10.0-3) ... Removing python-reportlab (3.3.0-2+deb9u1) ... Removing python-reportlab-accel:amd64 (3.3.0-2+deb9u1) ... Removing python-simpletal (4.1-9) ... Removing libwayland-server0:amd64 (1.12.0-1+deb9u1) ... Removing libwayland-cursor0:amd64 (1.12.0-1+deb9u1) ... Removing libwayland-client0:amd64 (1.12.0-1+deb9u1) ... Removing libsndfile1:amd64 (1.0.27-3) ... Removing libflac8:amd64 (1.3.2-1) ... Removing libfontenc1:amd64 (1:1.1.3-1+b2) ... Removing python-imaging (4.0.0-4+deb9u1) ... Removing python-pil:amd64 (4.0.0-4+deb9u1) ... Removing rename (0.20-4) ... update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode Removing ncbi-blast+ (2.6.0-1) ... Removing perl (5.24.1-3+deb9u7) ... Removing libperl5.24:amd64 (5.24.1-3+deb9u7) ... Removing libgdbm3:amd64 (1.8.3-14) ... Removing libgfortran3:amd64 (6.3.0-18+deb9u1) ... Removing libgif7:amd64 (5.1.4-0.4) ... Removing libglapi-mesa:amd64 (13.0.6-1+b2) ... Removing libjson-glib-1.0-0:amd64 (1.2.6-1) ... Removing libglib2.0-data (2.50.3-2+deb9u2) ... Removing libpq5:amd64 (9.6.17-0+deb9u1) ... Removing libldap-2.4-2:amd64 (2.4.44+dfsg-5+deb9u4) ... Removing libgomp1:amd64 (6.3.0-18+deb9u1) ... Removing libgpm2:amd64 (1.20.4-6.2+b1) ... Removing libgts-bin (0.7.6+darcs121130-4) ... Removing libgts-0.7-5:amd64 (0.7.6+darcs121130-4) ... Removing libhpdf-2.2.1 (2.2.1-1.1+b1) ... Removing python-lxml (3.7.1-1) ... Removing libxslt1.1:amd64 (1.1.29-2.1+deb9u2) ... Removing libisorelax-java (20041111-9) ... Removing libxom-java (1.2.10-1) ... Removing libjdom1-java (1.1.3-1) ... Removing libjaxen-java (1.1.6-1+deb9u1) ... Removing libxalan2-java (2.7.1-9) ... Removing libjaxp1.3-java (1.3.05-2) ... Removing libjs-jquery (3.1.1-2+deb9u1) ... Removing libjs-scriptaculous (1.9.0-2) ... Removing libjs-prototype (1.7.1-3) ... Removing libjson-glib-1.0-common (1.2.6-1) ... Removing libldap-common (2.4.44+dfsg-5+deb9u4) ... Removing libltdl7:amd64 (2.4.6-2) ... Removing liblua5.2-0:amd64 (5.2.4-1.1+b2) ... Removing libmagic1:amd64 (1:5.30-1+deb9u3) ... Removing libmagic-mgc (1:5.30-1+deb9u3) ... Removing libmariadbclient18:amd64 (10.1.45-0+deb9u1) ... Removing procps (2:3.3.12-3+deb9u1) ... Removing libncurses5:amd64 (6.0+20161126-1+deb9u2) ... Removing libnghttp2-14:amd64 (1.18.1-1+deb9u1) ... Removing libvorbisenc2:amd64 (1.3.5-4+deb9u2) ... Removing libvorbis0a:amd64 (1.3.5-4+deb9u2) ... Removing libogg0:amd64 (1.3.2-1) ... Removing libpathplan4 (2.38.0-17) ... Removing libpciaccess0:amd64 (0.13.4-1+b2) ... Removing libprocps6:amd64 (2:3.3.12-3+deb9u1) ... Removing libproxy1v5:amd64 (0.4.14-2) ... Removing libquadmath0:amd64 (6.3.0-18+deb9u1) ... Removing librelaxng-datatype-java (1.0+ds1-3) ... Removing libsasl2-2:amd64 (2.1.27~101-g0780600+dfsg-3+deb9u1) ... Removing libsasl2-modules:amd64 (2.1.27~101-g0780600+dfsg-3+deb9u1) ... Removing libsasl2-modules-db:amd64 (2.1.27~101-g0780600+dfsg-3+deb9u1) ... Removing libsaxon-java (1:6.5.5-10) ... Removing libsensors4:amd64 (1:3.4.0-4) ... Removing libsm6:amd64 (2:1.2.2-1+b3) ... Removing squizz (0.99c+dfsg-1) ... Removing libsquizz (0.99c+dfsg-1) ... Removing libssl1.0.2:amd64 (1.0.2u-1~deb9u1) ... Removing ssl-cert (1.0.39) ... Removing libtxc-dxtn-s2tc:amd64 (1.0+git20151227-2) ... Removing libwebpmux2:amd64 (0.5.2-1) ... Removing libwebpdemux2:amd64 (0.5.2-1) ... Removing libwebp6:amd64 (0.5.2-1) ... Removing tcpd (7.6.q-26) ... Removing libwrap0:amd64 (7.6.q-26) ... Removing libx11-xcb1:amd64 (2:1.6.4-3+deb9u1) ... Removing libxcb-dri2-0:amd64 (1.12-1) ... Removing libxcb-dri3-0:amd64 (1.12-1) ... Removing libxcb-glx0:amd64 (1.12-1) ... Removing libxcb-present0:amd64 (1.12-1) ... Removing libxcb-shape0:amd64 (1.12-1) ... Removing libxcb-sync1:amd64 (1.12-1) ... Removing libxdot4 (2.38.0-17) ... Removing libxerces2-java (2.11.0-7) ... Removing libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Removing libxxf86dga1:amd64 (2:1.1.4-1+b3) ... Removing libxkbcommon0:amd64 (0.7.1-2~deb9u1) ... Removing libxml-commons-external-java (1.4.01-2) ... Removing libxml-commons-resolver1.1-java (1.2-7) ... Removing libxmuu1:amd64 (2:1.1.2-2) ... Removing libxpm4:amd64 (1:3.5.12-1) ... Removing libxpp2-java (2.1.10-7) ... Removing libxpp3-java (1.1.4c-2) ... Removing libxshmfence1:amd64 (1.2-1+b2) ... Removing libxv1:amd64 (2:1.0.11-1) ... Removing mobyle-utils (1.5.5+dfsg-2) ... Removing mysql-common (5.8+1.0.2) ... Removing ncbi-data (6.1.20170106+dfsg1-0+deb9u1) ... Removing netbase (5.4) ... Removing perl-modules-5.24 (5.24.1-3+deb9u7) ... Removing primer3 (2.3.7-3) ... Removing psmisc (22.21-2.1+b2) ... Removing python-biopython-doc (1.68+dfsg-3) ... Removing python-bs4 (4.5.3-1) ... Removing python-chardet (2.3.0-2) ... Removing python-pkg-resources (33.1.1-1) ... Removing python-webencodings (0.5-2) ... Removing xml-core (0.17) ... Removing sgml-base (1.29) ... Removing unzip (6.0-21+deb9u2) ... Removing xdg-user-dirs (0.15-2+b1) ... Removing xkb-data (2.19-1+deb9u1) ... Removing xz-utils (5.2.2-1.2+b1) ... Removing libgtk2.0-0:amd64 (2.24.31-2) ... Removing gnome-icon-theme (3.12.0-2) ... update-alternatives: using /usr/share/icons/gnome/scalable/places/gnome-foot.svg to provide /usr/share/icons/gnome/scalable/places/start-here.svg (start-here.svg) in auto mode update-alternatives: warning: skip creation of /usr/share/icons/gnome/256x256/places/start-here.png because associated file /usr/share/icons/gnome/256x256/places/gnome-foot.png (of link group start-here.svg) doesn't exist Removing librsvg2-common:amd64 (2.40.16-1+b1) ... Removing librsvg2-2:amd64 (2.40.16-1+b1) ... Removing libpangocairo-1.0-0:amd64 (1.40.5-1) ... Removing libpangoft2-1.0-0:amd64 (1.40.5-1) ... Removing libpango-1.0-0:amd64 (1.40.5-1) ... Removing fontconfig (2.11.0-6.7+b1) ... Removing gtk-update-icon-cache (3.22.11-1) ... Removing hicolor-icon-theme (0.15-1) ... Removing libatk1.0-0:amd64 (2.22.0-1) ... Removing libatk1.0-data (2.22.0-1) ... Removing libice6:amd64 (2:1.0.9-2) ... Removing libcairo2:amd64 (1.14.8-1) ... Removing libcroco3:amd64 (0.6.11-3) ... Removing libthai0:amd64 (0.1.26-1) ... Removing libdatrie1:amd64 (0.2.10-4+b1) ... Removing python (2.7.13-2) ... Removing python2.7 (2.7.13-2+deb9u3) ... Removing libpython-stdlib:amd64 (2.7.13-2) ... Removing libpython2.7-stdlib:amd64 (2.7.13-2+deb9u3) ... Removing libharfbuzz0b:amd64 (1.4.2-1) ... Removing libgdk-pixbuf2.0-0:amd64 (2.36.5-2+deb9u2) ... Removing libgdk-pixbuf2.0-common (2.36.5-2+deb9u2) ... Removing shared-mime-info (1.8-1+deb9u1) ... Removing libglib2.0-0:amd64 (2.50.3-2+deb9u2) ... Removing libgraphite2-3:amd64 (1.3.10-1) ... Removing libgtk2.0-common (2.24.31-2) ... Removing libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u2) ... Removing libicu57:amd64 (57.1-6+deb9u4) ... Removing libtiff5:amd64 (4.0.8-2+deb9u5) ... Removing libjbig0:amd64 (2.1-3.1+b2) ... Removing libpixman-1-0:amd64 (0.34.0-1) ... Removing python-minimal (2.7.13-2) ... Removing python2.7-minimal (2.7.13-2+deb9u3) ... Removing libpython2.7-minimal:amd64 (2.7.13-2+deb9u3) ... Removing libreadline7:amd64 (7.0-3) ... Removing libthai-data (0.1.26-1) ... Removing libxcb-render0:amd64 (1.12-1) ... Removing libxcb-shm0:amd64 (1.12-1) ... Removing libxcomposite1:amd64 (1:0.4.4-2) ... Removing libxcursor1:amd64 (1:1.1.14-1+deb9u2) ... Removing libxdamage1:amd64 (1:1.1.4-2+b3) ... Removing libxfixes3:amd64 (1:5.0.3-1) ... Removing libxinerama1:amd64 (2:1.1.3-1+b3) ... Removing libxrandr2:amd64 (2:1.5.1-1) ... Removing mime-support (3.60) ... Removing readline-common (7.0-3) ... Removing ca-certificates-java (20170929~deb9u3) ... Removing ca-certificates (20200601~deb9u1) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing openssl (1.1.0l-1~deb9u1) ... Removing libssl1.1:amd64 (1.1.0l-1~deb9u1) ... Removing openjdk-8-jre-headless:amd64 (8u252-b09-1~deb9u1) ... Removing libfontconfig1:amd64 (2.11.0-6.7+b1) ... Removing fontconfig-config (2.11.0-6.7) ... Removing java-common (0.58+deb9u1) ... Removing libcups2:amd64 (2.2.1-8+deb9u6) ... Removing libavahi-client3:amd64 (0.6.32-2) ... Removing libavahi-common3:amd64 (0.6.32-2) ... Removing libavahi-common-data:amd64 (0.6.32-2) ... Removing libdbus-1-3:amd64 (1.10.32-0+deb9u1) ... Removing libexpat1:amd64 (2.2.0-2+deb9u3) ... Removing libfreetype6:amd64 (2.6.3-3.2+deb9u1) ... Removing libgnutls30:amd64 (3.5.8-5+deb9u5) ... Removing libhogweed4:amd64 (3.3-1+b2) ... Removing libgmp10:amd64 (2:6.1.2+dfsg-1) ... Removing libgssapi-krb5-2:amd64 (1.15-1+deb9u1) ... Removing libidn11:amd64 (1.33-1+deb9u1) ... Removing libjpeg62-turbo:amd64 (1:1.5.1-2) ... Removing libkrb5-3:amd64 (1.15-1+deb9u1) ... Removing libk5crypto3:amd64 (1.15-1+deb9u1) ... Removing libkrb5support0:amd64 (1.15-1+deb9u1) ... Removing libkeyutils1:amd64 (1.5.9-9) ... Removing liblcms2-2:amd64 (2.8-4+deb9u1) ... Removing libnettle6:amd64 (3.3-1+b2) ... Removing libnss3:amd64 (2:3.26.2-1.1+deb9u1) ... Removing libnspr4:amd64 (2:4.12-6) ... Removing libp11-kit0:amd64 (0.23.3-2) ... Removing libpcsclite1:amd64 (1.8.20-1) ... Removing libpng16-16:amd64 (1.6.28-1+deb9u1) ... Removing libsqlite3-0:amd64 (3.16.2-5+deb9u1) ... Removing libtasn1-6:amd64 (4.10-1.1+deb9u1) ... Removing libxtst6:amd64 (2:1.2.3-1) ... Removing libxi6:amd64 (2:1.7.9-1) ... Removing libxrender1:amd64 (1:0.9.10-1) ... Removing x11-common (1:7.7+19) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing lsb-base (9.20161125) ... Removing ttf-bitstream-vera (1.10-8) ... Removing ucf (3.0036) ... Removing libffi6:amd64 (3.2.1-6) ... Removing libxext6:amd64 (2:1.3.3-1+b2) ... Removing libx11-6:amd64 (2:1.6.4-3+deb9u1) ... Removing libxcb1:amd64 (1.12-1) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.8.3-1) ... Removing libx11-data (2:1.6.4-3+deb9u1) ... Removing libxau6:amd64 (1:1.0.8-1) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 1m22.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', 'remove', 'adwaita-icon-theme', 'ant', 'ant-optional', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'at-spi2-core', 'bzip2', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'dialign', 'emboss', 'emboss-data', 'emboss-lib', 'file', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-liberation', 'glib-networking:amd64', 'glib-networking-common', 'glib-networking-services', 'gnome-icon-theme', 'graphviz', 'gsettings-desktop-schemas', 'gsfonts', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'java-common', 'java-wrappers', 'javascript-common', 'jing', 'krb5-locales', 'libann0', 'libapparmor1:amd64', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libart-2.0-2:amd64', 'libasound2:amd64', 'libasound2-data', 'libasyncns0:amd64', 'libatk-bridge2.0-0:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0:amd64', 'libatk1.0-data', 'libatspi2.0-0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas-common', 'libblas3', 'libbsd0:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcdt5', 'libcgraph6', 'libcolord2:amd64', 'libcroco3:amd64', 'libcups2:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdom4j-java', 'libdrm-amdgpu1:amd64', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libegl1-mesa:amd64', 'libelf1:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libffi6:amd64', 'libflac8:amd64', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libgail-common:amd64', 'libgail18:amd64', 'libgbm1:amd64', 'libgd3:amd64', 'libgdbm3:amd64', 'libgdk-pixbuf2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran3:amd64', 'libgif7:amd64', 'libgl1-mesa-dri:amd64', 'libgl1-mesa-glx:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglib2.0-data', 'libgmp10:amd64', 'libgnutls30:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgtk2.0-0:amd64', 'libgtk2.0-bin', 'libgtk2.0-common', 'libgts-0.7-5:amd64', 'libgts-bin', 'libgvc6', 'libgvpr2', 'libharfbuzz0b:amd64', 'libhogweed4:amd64', 'libhpdf-2.2.1', 'libice6:amd64', 'libicu57:amd64', 'libidn11:amd64', 'libisorelax-java', 'libjaxen-java', 'libjaxp1.3-java', 'libjbig0:amd64', 'libjdom1-java', 'libjing-java', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-prototype', 'libjs-scriptaculous', 'libjson-glib-1.0-0:amd64', 'libjson-glib-1.0-common', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3', 'liblcms2-2:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libllvm3.9:amd64', 'libltdl7:amd64', 'liblua5.2-0:amd64', 'libmagic-mgc', 'libmagic1:amd64', 'libmariadbclient18:amd64', 'libmsv-java', 'libncurses5:amd64', 'libnettle6:amd64', 'libnghttp2-14:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libogg0:amd64', 'libp11-kit0:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpathplan4', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.24:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libprocps6:amd64', 'libproxy1v5:amd64', 'libpulse0:amd64', 'libpython-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'libreadline7:amd64', 'librelaxng-datatype-java', 'librest-0.7-0:amd64', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsaxon-java', 'libsaxonhe-java', 'libsensors4:amd64', 'libsm6:amd64', 'libsndfile1:amd64', 'libsoup-gnome2.4-1:amd64', 'libsoup2.4-1:amd64', 'libsqlite3-0:amd64', 'libsquizz', 'libssl1.0.2:amd64', 'libssl1.1:amd64', 'libtasn1-6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtxc-dxtn-s2tc:amd64', 'libvorbis0a:amd64', 'libvorbisenc2:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1-mesa:amd64', 'libwayland-server0:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux2:amd64', 'libwrap0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxalan2-java', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxdot4', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2:amd64', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxom-java', 'libxpm4:amd64', 'libxpp2-java', 'libxpp3-java', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxt6:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'lsb-base', 'mime-support', 'mobyle', 'mobyle-tutorials', 'mobyle-utils', 'mysql-common', 'ncbi-blast+-', 'ncbi-data', 'netbase', 'openjdk-8-jre:amd64', 'openjdk-8-jre-headless:amd64', 'openssl', 'perl', 'perl-modules-5.24', 'primer3', 'procps', 'psmisc', 'python', 'python-biopython', 'python-biopython-doc', 'python-bs4', 'python-chardet', 'python-html5lib', 'python-imaging', 'python-lxml', 'python-minimal', 'python-numpy', 'python-pil:amd64', 'python-pkg-resources', 'python-pygraphviz', 'python-renderpm:amd64', 'python-reportlab', 'python-reportlab-accel:amd64', 'python-simplejson', 'python-simpletal', 'python-six', 'python-webencodings', 'python2.7', 'python2.7-minimal', 'readline-common', 'rename', 'sgml-base', 'shared-mime-info', 'squizz', 'ssl-cert', 'tcpd', 'ttf-bitstream-vera', 'ucf', 'unzip', 'x11-common', 'x11-utils', 'xdg-user-dirs', 'xkb-data', 'xml-core', 'xz-utils', 'mobyle-programs'] 1m22.5s INFO: Running scripts post_remove 1m22.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_remove_exceptions'] 1m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_remove_exceptions'] 1m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg', '--purge', 'adwaita-icon-theme', 'ant', 'ant-optional', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'at-spi2-core', 'bzip2', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'dialign', 'emboss', 'emboss-data', 'emboss-lib', 'file', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-liberation', 'glib-networking:amd64', 'glib-networking-common', 'glib-networking-services', 'gnome-icon-theme', 'graphviz', 'gsettings-desktop-schemas', 'gsfonts', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'java-common', 'java-wrappers', 'javascript-common', 'jing', 'krb5-locales', 'libann0', 'libapparmor1:amd64', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libart-2.0-2:amd64', 'libasound2:amd64', 'libasound2-data', 'libasyncns0:amd64', 'libatk-bridge2.0-0:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0:amd64', 'libatk1.0-data', 'libatspi2.0-0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas-common', 'libblas3', 'libbsd0:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcdt5', 'libcgraph6', 'libcolord2:amd64', 'libcroco3:amd64', 'libcups2:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdom4j-java', 'libdrm-amdgpu1:amd64', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libegl1-mesa:amd64', 'libelf1:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libffi6:amd64', 'libflac8:amd64', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libgail-common:amd64', 'libgail18:amd64', 'libgbm1:amd64', 'libgd3:amd64', 'libgdbm3:amd64', 'libgdk-pixbuf2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran3:amd64', 'libgif7:amd64', 'libgl1-mesa-dri:amd64', 'libgl1-mesa-glx:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglib2.0-data', 'libgmp10:amd64', 'libgnutls30:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgtk2.0-0:amd64', 'libgtk2.0-bin', 'libgtk2.0-common', 'libgts-0.7-5:amd64', 'libgts-bin', 'libgvc6', 'libgvpr2', 'libharfbuzz0b:amd64', 'libhogweed4:amd64', 'libhpdf-2.2.1', 'libice6:amd64', 'libicu57:amd64', 'libidn11:amd64', 'libisorelax-java', 'libjaxen-java', 'libjaxp1.3-java', 'libjbig0:amd64', 'libjdom1-java', 'libjing-java', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-prototype', 'libjs-scriptaculous', 'libjson-glib-1.0-0:amd64', 'libjson-glib-1.0-common', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3', 'liblcms2-2:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libllvm3.9:amd64', 'libltdl7:amd64', 'liblua5.2-0:amd64', 'libmagic-mgc', 'libmagic1:amd64', 'libmariadbclient18:amd64', 'libmsv-java', 'libncurses5:amd64', 'libnettle6:amd64', 'libnghttp2-14:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libogg0:amd64', 'libp11-kit0:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpathplan4', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.24:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libprocps6:amd64', 'libproxy1v5:amd64', 'libpulse0:amd64', 'libpython-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'libreadline7:amd64', 'librelaxng-datatype-java', 'librest-0.7-0:amd64', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsaxon-java', 'libsaxonhe-java', 'libsensors4:amd64', 'libsm6:amd64', 'libsndfile1:amd64', 'libsoup-gnome2.4-1:amd64', 'libsoup2.4-1:amd64', 'libsqlite3-0:amd64', 'libsquizz', 'libssl1.0.2:amd64', 'libssl1.1:amd64', 'libtasn1-6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtxc-dxtn-s2tc:amd64', 'libvorbis0a:amd64', 'libvorbisenc2:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1-mesa:amd64', 'libwayland-server0:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux2:amd64', 'libwrap0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxalan2-java', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxdot4', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2:amd64', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxom-java', 'libxpm4:amd64', 'libxpp2-java', 'libxpp3-java', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxt6:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'lsb-base', 'mime-support', 'mobyle', 'mobyle-tutorials', 'mobyle-utils', 'mysql-common', 'ncbi-blast+', 'ncbi-data', 'netbase', 'openjdk-8-jre:amd64', 'openjdk-8-jre-headless:amd64', 'openssl', 'perl', 'perl-modules-5.24', 'primer3', 'procps', 'psmisc', 'python', 'python-biopython', 'python-biopython-doc', 'python-bs4', 'python-chardet', 'python-html5lib', 'python-imaging', 'python-lxml', 'python-minimal', 'python-numpy', 'python-pil:amd64', 'python-pkg-resources', 'python-pygraphviz', 'python-renderpm:amd64', 'python-reportlab', 'python-reportlab-accel:amd64', 'python-simplejson', 'python-simpletal', 'python-six', 'python-webencodings', 'python2.7', 'python2.7-minimal', 'readline-common', 'rename', 'sgml-base', 'shared-mime-info', 'squizz', 'ssl-cert', 'tcpd', 'ttf-bitstream-vera', 'ucf', 'unzip', 'x11-common', 'x11-utils', 'xdg-user-dirs', 'xkb-data', 'xml-core', 'xz-utils'] 1m23.9s DUMP: (Reading database ... 4810 files and directories currently installed.) Purging configuration files for adwaita-icon-theme (3.22.0-1+deb9u1) ... dpkg: warning: ignoring request to remove ant which isn't installed dpkg: warning: ignoring request to remove ant-optional which isn't installed Purging configuration files for apache2 (2.4.25-3+deb9u9) ... dpkg: warning: ignoring request to remove apache2-bin which isn't installed dpkg: warning: ignoring request to remove apache2-data which isn't installed dpkg: warning: ignoring request to remove apache2-utils which isn't installed Purging configuration files for at-spi2-core (2.22.0-6+deb9u1) ... dpkg: warning: ignoring request to remove bzip2 which isn't installed Purging configuration files for ca-certificates (20200601~deb9u1) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for ca-certificates-java (20170929~deb9u3) ... dpkg: warning: while removing ca-certificates-java, directory '/etc/ssl/certs' not empty so not removed Purging configuration files for dbus (1.10.32-0+deb9u1) ... rmdir: failed to remove '/var/run/dbus': No such file or directory dpkg: warning: ignoring request to remove dconf-gsettings-backend which isn't installed dpkg: warning: ignoring request to remove dconf-service which isn't installed dpkg: warning: ignoring request to remove default-jre which isn't installed dpkg: warning: ignoring request to remove default-jre-headless which isn't installed dpkg: warning: ignoring request to remove dialign which isn't installed dpkg: warning: ignoring request to remove emboss which isn't installed dpkg: warning: ignoring request to remove emboss-data which isn't installed dpkg: warning: ignoring request to remove emboss-lib which isn't installed dpkg: warning: ignoring request to remove file which isn't installed Purging configuration files for fontconfig (2.11.0-6.7+b1) ... Purging configuration files for fontconfig-config (2.11.0-6.7) ... Purging configuration files for fonts-dejavu-core (2.37-1) ... dpkg: warning: ignoring request to remove fonts-dejavu-extra which isn't installed dpkg: warning: ignoring request to remove fonts-liberation which isn't installed dpkg: warning: ignoring request to remove glib-networking which isn't installed dpkg: warning: ignoring request to remove glib-networking-common which isn't installed dpkg: warning: ignoring request to remove glib-networking-services which isn't installed dpkg: warning: ignoring request to remove gnome-icon-theme which isn't installed Purging configuration files for graphviz (2.38.0-17) ... dpkg: warning: ignoring request to remove gsettings-desktop-schemas which isn't installed Purging configuration files for gsfonts (1:8.11+urwcyr1.0.7~pre44-4.3) ... dpkg: warning: ignoring request to remove gtk-update-icon-cache which isn't installed dpkg: warning: ignoring request to remove hicolor-icon-theme which isn't installed Purging configuration files for java-common (0.58+deb9u1) ... dpkg: warning: ignoring request to remove java-wrappers which isn't installed Purging configuration files for javascript-common (11) ... dpkg: warning: ignoring request to remove jing which isn't installed dpkg: warning: ignoring request to remove krb5-locales which isn't installed dpkg: warning: ignoring request to remove libann0 which isn't installed dpkg: warning: ignoring request to remove libapparmor1 which isn't installed dpkg: warning: ignoring request to remove libapr1 which isn't installed dpkg: warning: ignoring request to remove libaprutil1 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-dbd-sqlite3 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-ldap which isn't installed Purging configuration files for libart-2.0-2:amd64 (2.3.21-2) ... dpkg: warning: ignoring request to remove libasound2 which isn't installed dpkg: warning: ignoring request to remove libasound2-data which isn't installed dpkg: warning: ignoring request to remove libasyncns0 which isn't installed dpkg: warning: ignoring request to remove libatk-bridge2.0-0 which isn't installed dpkg: warning: ignoring request to remove libatk-wrapper-java which isn't installed dpkg: warning: ignoring request to remove libatk-wrapper-java-jni which isn't installed dpkg: warning: ignoring request to remove libatk1.0-0 which isn't installed dpkg: warning: ignoring request to remove libatk1.0-data which isn't installed dpkg: warning: ignoring request to remove libatspi2.0-0 which isn't installed dpkg: warning: ignoring request to remove libavahi-client3 which isn't installed dpkg: warning: ignoring request to remove libavahi-common-data which isn't installed dpkg: warning: ignoring request to remove libavahi-common3 which isn't installed dpkg: warning: ignoring request to remove libblas-common which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libcairo-gobject2 which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcap2 which isn't installed dpkg: warning: ignoring request to remove libcdt5 which isn't installed dpkg: warning: ignoring request to remove libcgraph6 which isn't installed dpkg: warning: ignoring request to remove libcolord2 which isn't installed dpkg: warning: ignoring request to remove libcroco3 which isn't installed dpkg: warning: ignoring request to remove libcups2 which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libdbus-1-3 which isn't installed dpkg: warning: ignoring request to remove libdconf1 which isn't installed dpkg: warning: ignoring request to remove libdom4j-java which isn't installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which isn't installed dpkg: warning: ignoring request to remove libdrm-intel1 which isn't installed dpkg: warning: ignoring request to remove libdrm-nouveau2 which isn't installed dpkg: warning: ignoring request to remove libdrm-radeon1 which isn't installed dpkg: warning: ignoring request to remove libdrm2 which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libegl1-mesa which isn't installed dpkg: warning: ignoring request to remove libelf1 which isn't installed dpkg: warning: ignoring request to remove libepoxy0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libffi6 which isn't installed dpkg: warning: ignoring request to remove libflac8 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfontenc1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libgail-common which isn't installed dpkg: warning: ignoring request to remove libgail18 which isn't installed dpkg: warning: ignoring request to remove libgbm1 which isn't installed dpkg: warning: ignoring request to remove libgd3 which isn't installed dpkg: warning: ignoring request to remove libgdbm3 which isn't installed Purging configuration files for libgdk-pixbuf2.0-0:amd64 (2.36.5-2+deb9u2) ... dpkg: warning: ignoring request to remove libgdk-pixbuf2.0-common which isn't installed dpkg: warning: ignoring request to remove libgfortran3 which isn't installed dpkg: warning: ignoring request to remove libgif7 which isn't installed Purging configuration files for libgl1-mesa-dri:amd64 (13.0.6-1+b2) ... dpkg: warning: ignoring request to remove libgl1-mesa-glx which isn't installed dpkg: warning: ignoring request to remove libglapi-mesa which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.50.3-2+deb9u2) ... dpkg: warning: ignoring request to remove libglib2.0-data which isn't installed dpkg: warning: ignoring request to remove libgmp10 which isn't installed dpkg: warning: ignoring request to remove libgnutls30 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgpm2 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.15-1+deb9u1) ... Purging configuration files for libgtk-3-0:amd64 (3.22.11-1) ... dpkg: warning: ignoring request to remove libgtk-3-bin which isn't installed Purging configuration files for libgtk-3-common (3.22.11-1) ... Purging configuration files for libgtk2.0-0:amd64 (2.24.31-2) ... dpkg: warning: ignoring request to remove libgtk2.0-bin which isn't installed Purging configuration files for libgtk2.0-common (2.24.31-2) ... dpkg: warning: ignoring request to remove libgts-0.7-5 which isn't installed dpkg: warning: ignoring request to remove libgts-bin which isn't installed Purging configuration files for libgvc6 (2.38.0-17) ... dpkg: warning: ignoring request to remove libgvpr2 which isn't installed dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libhogweed4 which isn't installed dpkg: warning: ignoring request to remove libhpdf-2.2.1 which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu57 which isn't installed dpkg: warning: ignoring request to remove libidn11 which isn't installed dpkg: warning: ignoring request to remove libisorelax-java which isn't installed dpkg: warning: ignoring request to remove libjaxen-java which isn't installed dpkg: warning: ignoring request to remove libjaxp1.3-java which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjdom1-java which isn't installed dpkg: warning: ignoring request to remove libjing-java which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjs-jquery which isn't installed dpkg: warning: ignoring request to remove libjs-prototype which isn't installed dpkg: warning: ignoring request to remove libjs-scriptaculous which isn't installed dpkg: warning: ignoring request to remove libjson-glib-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libjson-glib-1.0-common which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblcms2-2 which isn't installed dpkg: warning: ignoring request to remove libldap-2.4-2 which isn't installed Purging configuration files for libldap-common (2.4.44+dfsg-5+deb9u4) ... dpkg: warning: ignoring request to remove libllvm3.9 which isn't installed dpkg: warning: ignoring request to remove libltdl7 which isn't installed dpkg: warning: ignoring request to remove liblua5.2-0 which isn't installed dpkg: warning: ignoring request to remove libmagic-mgc which isn't installed Purging configuration files for libmagic1:amd64 (1:5.30-1+deb9u3) ... dpkg: warning: ignoring request to remove libmariadbclient18 which isn't installed dpkg: warning: ignoring request to remove libmsv-java which isn't installed dpkg: warning: ignoring request to remove libncurses5 which isn't installed dpkg: warning: ignoring request to remove libnettle6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnspr4 which isn't installed dpkg: warning: ignoring request to remove libnss3 which isn't installed Purging configuration files for libogg0:amd64 (1.3.2-1) ... dpkg: warning: ignoring request to remove libp11-kit0 which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpathplan4 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libpcsclite1 which isn't installed dpkg: warning: ignoring request to remove libperl5.24 which isn't installed dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpq5 which isn't installed dpkg: warning: ignoring request to remove libprocps6 which isn't installed dpkg: warning: ignoring request to remove libproxy1v5 which isn't installed Purging configuration files for libpulse0:amd64 (10.0-1+deb9u1) ... dpkg: warning: ignoring request to remove libpython-stdlib which isn't installed Purging configuration files for libpython2.7-minimal:amd64 (2.7.13-2+deb9u3) ... dpkg: warning: ignoring request to remove libpython2.7-stdlib which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libreadline7 which isn't installed dpkg: warning: ignoring request to remove librelaxng-datatype-java which isn't installed dpkg: warning: ignoring request to remove librest-0.7-0 which isn't installed dpkg: warning: ignoring request to remove librsvg2-2 which isn't installed dpkg: warning: ignoring request to remove librsvg2-common which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed Purging configuration files for libsasl2-modules:amd64 (2.1.27~101-g0780600+dfsg-3+deb9u1) ... dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsaxon-java which isn't installed dpkg: warning: ignoring request to remove libsaxonhe-java which isn't installed Purging configuration files for libsensors4:amd64 (1:3.4.0-4) ... dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libsndfile1 which isn't installed dpkg: warning: ignoring request to remove libsoup-gnome2.4-1 which isn't installed dpkg: warning: ignoring request to remove libsoup2.4-1 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libsquizz which isn't installed Purging configuration files for libssl1.0.2:amd64 (1.0.2u-1~deb9u1) ... Purging configuration files for libssl1.1:amd64 (1.1.0l-1~deb9u1) ... dpkg: warning: ignoring request to remove libtasn1-6 which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtiff5 which isn't installed dpkg: warning: ignoring request to remove libtxc-dxtn-s2tc which isn't installed dpkg: warning: ignoring request to remove libvorbis0a which isn't installed dpkg: warning: ignoring request to remove libvorbisenc2 which isn't installed dpkg: warning: ignoring request to remove libwayland-client0 which isn't installed dpkg: warning: ignoring request to remove libwayland-cursor0 which isn't installed dpkg: warning: ignoring request to remove libwayland-egl1-mesa which isn't installed dpkg: warning: ignoring request to remove libwayland-server0 which isn't installed dpkg: warning: ignoring request to remove libwebp6 which isn't installed dpkg: warning: ignoring request to remove libwebpdemux2 which isn't installed dpkg: warning: ignoring request to remove libwebpmux2 which isn't installed Purging configuration files for libwrap0:amd64 (7.6.q-26) ... dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libx11-xcb1 which isn't installed dpkg: warning: ignoring request to remove libxalan2-java which isn't installed Purging configuration files for libxau6:amd64 (1:1.0.8-1) ... dpkg: warning: ignoring request to remove libxaw7 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri2-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri3-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-glx0 which isn't installed dpkg: warning: ignoring request to remove libxcb-present0 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shape0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb-sync1 which isn't installed dpkg: warning: ignoring request to remove libxcb-xfixes0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxcomposite1 which isn't installed dpkg: warning: ignoring request to remove libxcursor1 which isn't installed dpkg: warning: ignoring request to remove libxdamage1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxdot4 which isn't installed dpkg: warning: ignoring request to remove libxerces2-java which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxfixes3 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxi6 which isn't installed dpkg: warning: ignoring request to remove libxinerama1 which isn't installed dpkg: warning: ignoring request to remove libxkbcommon0 which isn't installed dpkg: warning: ignoring request to remove libxml-commons-external-java which isn't installed Purging configuration files for libxml-commons-resolver1.1-java (1.2-7) ... dpkg: warning: while removing libxml-commons-resolver1.1-java, directory '/etc/xml' not empty so not removed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxmu6 which isn't installed dpkg: warning: ignoring request to remove libxmuu1 which isn't installed dpkg: warning: ignoring request to remove libxom-java which isn't installed dpkg: warning: ignoring request to remove libxpm4 which isn't installed dpkg: warning: ignoring request to remove libxpp2-java which isn't installed dpkg: warning: ignoring request to remove libxpp3-java which isn't installed dpkg: warning: ignoring request to remove libxrandr2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxshmfence1 which isn't installed dpkg: warning: ignoring request to remove libxslt1.1 which isn't installed dpkg: warning: ignoring request to remove libxt6 which isn't installed dpkg: warning: ignoring request to remove libxtst6 which isn't installed dpkg: warning: ignoring request to remove libxv1 which isn't installed dpkg: warning: ignoring request to remove libxxf86dga1 which isn't installed dpkg: warning: ignoring request to remove libxxf86vm1 which isn't installed dpkg: warning: ignoring request to remove lsb-base which isn't installed Purging configuration files for mime-support (3.60) ... Purging configuration files for mobyle (1.5.5+dfsg-2) ... dpkg: warning: ignoring request to remove mobyle-tutorials which isn't installed dpkg: warning: ignoring request to remove mobyle-utils which isn't installed Purging configuration files for mysql-common (5.8+1.0.2) ... dpkg: warning: ignoring request to remove ncbi-blast+ which isn't installed Purging configuration files for ncbi-data (6.1.20170106+dfsg1-0+deb9u1) ... Purging configuration files for netbase (5.4) ... dpkg: warning: ignoring request to remove openjdk-8-jre which isn't installed Purging configuration files for openjdk-8-jre-headless:amd64 (8u252-b09-1~deb9u1) ... Purging configuration files for openssl (1.1.0l-1~deb9u1) ... dpkg: warning: while removing openssl, directory '/etc/ssl/private' not empty so not removed Purging configuration files for perl (5.24.1-3+deb9u7) ... dpkg: warning: ignoring request to remove perl-modules-5.24 which isn't installed Purging configuration files for primer3 (2.3.7-3) ... Purging configuration files for procps (2:3.3.12-3+deb9u1) ... Purging configuration files for psmisc (22.21-2.1+b2) ... Purging configuration files for python (2.7.13-2) ... dpkg: warning: ignoring request to remove python-biopython which isn't installed dpkg: warning: ignoring request to remove python-biopython-doc which isn't installed dpkg: warning: ignoring request to remove python-bs4 which isn't installed dpkg: warning: ignoring request to remove python-chardet which isn't installed dpkg: warning: ignoring request to remove python-html5lib which isn't installed dpkg: warning: ignoring request to remove python-imaging which isn't installed dpkg: warning: ignoring request to remove python-lxml which isn't installed dpkg: warning: ignoring request to remove python-minimal which isn't installed dpkg: warning: ignoring request to remove python-numpy which isn't installed dpkg: warning: ignoring request to remove python-pil which isn't installed dpkg: warning: ignoring request to remove python-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python-pygraphviz which isn't installed dpkg: warning: ignoring request to remove python-renderpm which isn't installed dpkg: warning: ignoring request to remove python-reportlab which isn't installed dpkg: warning: ignoring request to remove python-reportlab-accel which isn't installed dpkg: warning: ignoring request to remove python-simplejson which isn't installed dpkg: warning: ignoring request to remove python-simpletal which isn't installed dpkg: warning: ignoring request to remove python-six which isn't installed dpkg: warning: ignoring request to remove python-webencodings which isn't installed dpkg: warning: ignoring request to remove python2.7 which isn't installed Purging configuration files for python2.7-minimal (2.7.13-2+deb9u3) ... Purging configuration files for readline-common (7.0-3) ... dpkg: warning: ignoring request to remove rename which isn't installed Purging configuration files for sgml-base (1.29) ... Purging configuration files for shared-mime-info (1.8-1+deb9u1) ... dpkg: warning: ignoring request to remove squizz which isn't installed Purging configuration files for ssl-cert (1.0.39) ... dpkg: warning: ignoring request to remove tcpd which isn't installed dpkg: warning: ignoring request to remove ttf-bitstream-vera which isn't installed Purging configuration files for ucf (3.0036) ... Purging configuration files for unzip (6.0-21+deb9u2) ... Purging configuration files for x11-common (1:7.7+19) ... Purging configuration files for x11-utils (7.7+3+b1) ... Purging configuration files for xdg-user-dirs (0.15-2+b1) ... dpkg: warning: ignoring request to remove xkb-data which isn't installed Purging configuration files for xml-core (0.17) ... dpkg: warning: ignoring request to remove xz-utils which isn't installed 1m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg', '--purge', 'adwaita-icon-theme', 'ant', 'ant-optional', 'apache2', 'apache2-bin', 'apache2-data', 'apache2-utils', 'at-spi2-core', 'bzip2', 'ca-certificates', 'ca-certificates-java', 'dbus', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jre', 'default-jre-headless', 'dialign', 'emboss', 'emboss-data', 'emboss-lib', 'file', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-liberation', 'glib-networking:amd64', 'glib-networking-common', 'glib-networking-services', 'gnome-icon-theme', 'graphviz', 'gsettings-desktop-schemas', 'gsfonts', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'java-common', 'java-wrappers', 'javascript-common', 'jing', 'krb5-locales', 'libann0', 'libapparmor1:amd64', 'libapr1:amd64', 'libaprutil1:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libart-2.0-2:amd64', 'libasound2:amd64', 'libasound2-data', 'libasyncns0:amd64', 'libatk-bridge2.0-0:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0:amd64', 'libatk1.0-data', 'libatspi2.0-0:amd64', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libblas-common', 'libblas3', 'libbsd0:amd64', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcap2:amd64', 'libcdt5', 'libcgraph6', 'libcolord2:amd64', 'libcroco3:amd64', 'libcups2:amd64', 'libdatrie1:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libdom4j-java', 'libdrm-amdgpu1:amd64', 'libdrm-intel1:amd64', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libegl1-mesa:amd64', 'libelf1:amd64', 'libepoxy0:amd64', 'libexpat1:amd64', 'libffi6:amd64', 'libflac8:amd64', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libgail-common:amd64', 'libgail18:amd64', 'libgbm1:amd64', 'libgd3:amd64', 'libgdbm3:amd64', 'libgdk-pixbuf2.0-0:amd64', 'libgdk-pixbuf2.0-common', 'libgfortran3:amd64', 'libgif7:amd64', 'libgl1-mesa-dri:amd64', 'libgl1-mesa-glx:amd64', 'libglapi-mesa:amd64', 'libglib2.0-0:amd64', 'libglib2.0-data', 'libgmp10:amd64', 'libgnutls30:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgtk2.0-0:amd64', 'libgtk2.0-bin', 'libgtk2.0-common', 'libgts-0.7-5:amd64', 'libgts-bin', 'libgvc6', 'libgvpr2', 'libharfbuzz0b:amd64', 'libhogweed4:amd64', 'libhpdf-2.2.1', 'libice6:amd64', 'libicu57:amd64', 'libidn11:amd64', 'libisorelax-java', 'libjaxen-java', 'libjaxp1.3-java', 'libjbig0:amd64', 'libjdom1-java', 'libjing-java', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-prototype', 'libjs-scriptaculous', 'libjson-glib-1.0-0:amd64', 'libjson-glib-1.0-common', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3', 'liblcms2-2:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'libllvm3.9:amd64', 'libltdl7:amd64', 'liblua5.2-0:amd64', 'libmagic-mgc', 'libmagic1:amd64', 'libmariadbclient18:amd64', 'libmsv-java', 'libncurses5:amd64', 'libnettle6:amd64', 'libnghttp2-14:amd64', 'libnspr4:amd64', 'libnss3:amd64', 'libogg0:amd64', 'libp11-kit0:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpathplan4', 'libpciaccess0:amd64', 'libpcsclite1:amd64', 'libperl5.24:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpq5:amd64', 'libprocps6:amd64', 'libproxy1v5:amd64', 'libpulse0:amd64', 'libpython-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'libreadline7:amd64', 'librelaxng-datatype-java', 'librest-0.7-0:amd64', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsaxon-java', 'libsaxonhe-java', 'libsensors4:amd64', 'libsm6:amd64', 'libsndfile1:amd64', 'libsoup-gnome2.4-1:amd64', 'libsoup2.4-1:amd64', 'libsqlite3-0:amd64', 'libsquizz', 'libssl1.0.2:amd64', 'libssl1.1:amd64', 'libtasn1-6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtxc-dxtn-s2tc:amd64', 'libvorbis0a:amd64', 'libvorbisenc2:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1-mesa:amd64', 'libwayland-server0:amd64', 'libwebp6:amd64', 'libwebpdemux2:amd64', 'libwebpmux2:amd64', 'libwrap0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxalan2-java', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxdot4', 'libxerces2-java', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxml-commons-external-java', 'libxml-commons-resolver1.1-java', 'libxml2:amd64', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxom-java', 'libxpm4:amd64', 'libxpp2-java', 'libxpp3-java', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxt6:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'lsb-base', 'mime-support', 'mobyle', 'mobyle-tutorials', 'mobyle-utils', 'mysql-common', 'ncbi-blast+', 'ncbi-data', 'netbase', 'openjdk-8-jre:amd64', 'openjdk-8-jre-headless:amd64', 'openssl', 'perl', 'perl-modules-5.24', 'primer3', 'procps', 'psmisc', 'python', 'python-biopython', 'python-biopython-doc', 'python-bs4', 'python-chardet', 'python-html5lib', 'python-imaging', 'python-lxml', 'python-minimal', 'python-numpy', 'python-pil:amd64', 'python-pkg-resources', 'python-pygraphviz', 'python-renderpm:amd64', 'python-reportlab', 'python-reportlab-accel:amd64', 'python-simplejson', 'python-simpletal', 'python-six', 'python-webencodings', 'python2.7', 'python2.7-minimal', 'readline-common', 'rename', 'sgml-base', 'shared-mime-info', 'squizz', 'ssl-cert', 'tcpd', 'ttf-bitstream-vera', 'ucf', 'unzip', 'x11-common', 'x11-utils', 'xdg-user-dirs', 'xkb-data', 'xml-core', 'xz-utils'] 1m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg', '--purge', 'mobyle-programs'] 1m23.9s DUMP: (Reading database ... 4447 files and directories currently installed.) Purging configuration files for mobyle-programs (5.1.2-1) ... 1m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg', '--purge', 'mobyle-programs'] 1m23.9s INFO: Running scripts post_purge 1m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_purge_exceptions'] 1m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_purge_exceptions'] 1m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg', '--purge', '--pending'] 1m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg', '--purge', '--pending'] 1m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg', '--remove', '--pending'] 1m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg', '--remove', '--pending'] 1m23.9s INFO: Running scripts post_test 1m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_test_exceptions'] 1m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'tmp/scripts/post_test_exceptions'] 1m23.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 1m24.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 1m24.5s DEBUG: No broken symlinks as far as we can find. 1m24.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg-divert', '--list'] 1m24.5s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m24.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'dpkg-divert', '--list'] 1m24.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', 'clean'] 1m24.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp', 'apt-get', 'clean'] 1m24.6s DEBUG: Recording chroot state 1m25.0s INFO: PASS: Installation and purging test. 1m25.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/shm'] 1m25.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/shm'] 1m25.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/console'] 1m25.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/console'] 1m25.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/ptmx'] 1m25.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/ptmx'] 1m25.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/pts'] 1m25.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/dev/pts'] 1m25.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/proc'] 1m25.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp/proc'] 1m25.3s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 1m25.4s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpquqjtnfp'] 1m25.4s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpquqjtnfp 1m25.4s INFO: PASS: All tests. 1m25.4s INFO: piuparts run ends. ret=0 End: 2023-03-22 10:56:28 GMT