Start: 2023-03-03 05:55:15 GMT Package: mrs Source: mrs (6.0.5+dfsg-2) Version: 6.0.5+dfsg-2+b2 Installed-Size: 3773 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libboost-chrono1.62.0, libboost-date-time1.62.0, libboost-filesystem1.62.0, libboost-iostreams1.62.0, libboost-math1.62.0, libboost-program-options1.62.0, libboost-random1.62.0, libboost-regex1.62.0, libboost-system1.62.0, libboost-thread1.62.0, libboost-timer1.62.0, libbz2-1.0, libc6 (>= 2.14), libgcc1 (>= 1:3.0), liblog4cpp5v5, libperl5.24 (>= 5.24.0), libstdc++6 (>= 5.2), libzeep3.0v5, zlib1g (>= 1:1.1.4), adduser, rsync, clustalo, libjs-jquery, libjs-jquery-ui Description: Information Retrieval System for Biomedical databanks Homepage: http://mrs.cmbi.ru.nl/ Description-md5: c50a919ab813f0747cc44bc578cbc99f Section: science Priority: optional Filename: pool/main/m/mrs/mrs_6.0.5+dfsg-2+b2_amd64.deb Size: 968708 MD5sum: b289894a89ad9d4c7703b56f993d0945 SHA256: 577452e1c5c52557e609798698cc9071758d177d18d1d8318fdf02fb9540e808 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch --no-upgrade-test --apt mrs=6.0.5+dfsg-2+b2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch --no-upgrade-test --apt mrs=6.0.5+dfsg-2+b2 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmppnbw5o7c 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmppnbw5o7c 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/proc'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/proc'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/pts'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/pts'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/ptmx'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/ptmx'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/console'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/console'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/shm'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/shm'] 0m1.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main 0m1.4s DEBUG: Created policy-rc.d and chmodded it. 0m1.4s DEBUG: Created resolv.conf. 0m1.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmppnbw5o7c/tmp/scripts/ 0m1.4s INFO: Running scripts post_chroot_unpack 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', 'update'] 0m2.2s DUMP: Ign:1 http://deb.debian.org/debian stretch InRelease Hit:2 http://deb.debian.org/debian stretch Release Reading package lists... 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', 'update'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.8s DUMP: 660e5103244a20b75ca08c3f8741e16e - 0m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.8s INFO: Running scripts post_setup 0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_dummy_users'] 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_dummy_users'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_forbid_home'] 0m3.5s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_forbid_home'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.5s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' '/bin/sync' -> 'true' 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_minimize'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_minimize'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_zz_backports'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_setup_zz_backports'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', 'clean'] 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', 'clean'] 0m3.5s DEBUG: Recording chroot state 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.9s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.10 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u1 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.25 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u1 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u1 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+b1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.10 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+b1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+b1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u12 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u12 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed login login 1:4.4-4.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed passwd passwd 1:4.4-4.1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg-divert', '--list'] 0m3.9s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg-divert', '--list'] 0m3.9s INFO: Running scripts is_testable 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/is_testable_uninstallable'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/is_testable_uninstallable'] 0m3.9s INFO: apt-cache does not know about any of the requested packages 0m3.9s INFO: Running scripts pre_test 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_test_exceptions'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_test_exceptions'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_test_root_password'] 0m3.9s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_test_root_password'] 0m3.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m4.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m4.5s DEBUG: No broken symlinks as far as we can find. 0m4.5s INFO: Running scripts pre_install 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_database-server'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_database-server'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_exceptions'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_exceptions'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_extras'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_extras'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m4.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m5.1s DEBUG: No broken symlinks as far as we can find. 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-cache', 'policy'] 0m5.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-cache', 'policy'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-cache', 'policy', 'mrs'] 0m5.8s DUMP: mrs: Installed: (none) Candidate: 6.0.5+dfsg-2+b2 Version table: 6.0.5+dfsg-2+b2 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-cache', 'policy', 'mrs'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', '-y', 'install', 'mrs=6.0.5+dfsg-2+b2'] 0m10.2s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: clustalo javascript-common libargtable2-0 libboost-chrono1.62.0 libboost-date-time1.62.0 libboost-filesystem1.62.0 libboost-iostreams1.62.0 libboost-math1.62.0 libboost-program-options1.62.0 libboost-random1.62.0 libboost-regex1.62.0 libboost-system1.62.0 libboost-thread1.62.0 libboost-timer1.62.0 libgdbm3 libgomp1 libicu57 libjs-jquery libjs-jquery-ui liblog4cpp5v5 libperl5.24 libpopt0 libzeep3.0v5 lsb-base netbase perl perl-modules-5.24 rename rsync Suggested packages: apache2 | lighttpd | httpd libjs-jquery-ui-docs perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make openssh-client openssh-server The following NEW packages will be installed: clustalo javascript-common libargtable2-0 libboost-chrono1.62.0 libboost-date-time1.62.0 libboost-filesystem1.62.0 libboost-iostreams1.62.0 libboost-math1.62.0 libboost-program-options1.62.0 libboost-random1.62.0 libboost-regex1.62.0 libboost-system1.62.0 libboost-thread1.62.0 libboost-timer1.62.0 libgdbm3 libgomp1 libicu57 libjs-jquery libjs-jquery-ui liblog4cpp5v5 libperl5.24 libpopt0 libzeep3.0v5 lsb-base mrs netbase perl perl-modules-5.24 rename rsync 0 upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 18.1 MB of archives. After this operation, 85.7 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian stretch/main amd64 perl-modules-5.24 all 5.24.1-3+deb9u7 [2723 kB] Get:2 http://deb.debian.org/debian stretch/main amd64 libgdbm3 amd64 1.8.3-14 [30.0 kB] Get:3 http://deb.debian.org/debian stretch/main amd64 libperl5.24 amd64 5.24.1-3+deb9u7 [3527 kB] Get:4 http://deb.debian.org/debian stretch/main amd64 perl amd64 5.24.1-3+deb9u7 [218 kB] Get:5 http://deb.debian.org/debian stretch/main amd64 lsb-base all 9.20161125 [27.9 kB] Get:6 http://deb.debian.org/debian stretch/main amd64 libpopt0 amd64 1.16-10+b2 [49.4 kB] Get:7 http://deb.debian.org/debian stretch/main amd64 netbase all 5.4 [19.1 kB] Get:8 http://deb.debian.org/debian stretch/main amd64 libargtable2-0 amd64 13-1 [17.4 kB] Get:9 http://deb.debian.org/debian stretch/main amd64 libgomp1 amd64 6.3.0-18+deb9u1 [73.3 kB] Get:10 http://deb.debian.org/debian stretch/main amd64 clustalo amd64 1.2.4-1 [263 kB] Get:11 http://deb.debian.org/debian stretch/main amd64 javascript-common all 11 [6120 B] Get:12 http://deb.debian.org/debian stretch/main amd64 libboost-system1.62.0 amd64 1.62.0+dfsg-4 [32.4 kB] Get:13 http://deb.debian.org/debian stretch/main amd64 libboost-chrono1.62.0 amd64 1.62.0+dfsg-4 [36.0 kB] Get:14 http://deb.debian.org/debian stretch/main amd64 libboost-date-time1.62.0 amd64 1.62.0+dfsg-4 [42.9 kB] Get:15 http://deb.debian.org/debian stretch/main amd64 libboost-filesystem1.62.0 amd64 1.62.0+dfsg-4 [63.2 kB] Get:16 http://deb.debian.org/debian stretch/main amd64 libboost-iostreams1.62.0 amd64 1.62.0+dfsg-4 [50.8 kB] Get:17 http://deb.debian.org/debian stretch/main amd64 libboost-math1.62.0 amd64 1.62.0+dfsg-4 [313 kB] Get:18 http://deb.debian.org/debian stretch/main amd64 libboost-program-options1.62.0 amd64 1.62.0+dfsg-4 [159 kB] Get:19 http://deb.debian.org/debian stretch/main amd64 libboost-random1.62.0 amd64 1.62.0+dfsg-4 [35.5 kB] Get:20 http://deb.debian.org/debian stretch/main amd64 libicu57 amd64 57.1-6+deb9u4 [7699 kB] Get:21 http://deb.debian.org/debian stretch/main amd64 libboost-regex1.62.0 amd64 1.62.0+dfsg-4 [288 kB] Get:22 http://deb.debian.org/debian stretch/main amd64 libboost-thread1.62.0 amd64 1.62.0+dfsg-4 [71.5 kB] Get:23 http://deb.debian.org/debian stretch/main amd64 libboost-timer1.62.0 amd64 1.62.0+dfsg-4 [34.5 kB] Get:24 http://deb.debian.org/debian stretch/main amd64 libjs-jquery all 3.1.1-2+deb9u1 [154 kB] Get:25 http://deb.debian.org/debian stretch/main amd64 libjs-jquery-ui all 1.12.1+dfsg-4 [232 kB] Get:26 http://deb.debian.org/debian stretch/main amd64 liblog4cpp5v5 amd64 1.1.1-3 [102 kB] Get:27 http://deb.debian.org/debian stretch/main amd64 libzeep3.0v5 amd64 3.0.2-4+b2 [435 kB] Get:28 http://deb.debian.org/debian stretch/main amd64 rsync amd64 3.1.2-1+deb9u2 [393 kB] Get:29 http://deb.debian.org/debian stretch/main amd64 mrs amd64 6.0.5+dfsg-2+b2 [969 kB] Get:30 http://deb.debian.org/debian stretch/main amd64 rename all 0.20-4 [12.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.1 MB in 0s (39.6 MB/s) Selecting previously unselected package perl-modules-5.24. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4411 files and directories currently installed.) Preparing to unpack .../00-perl-modules-5.24_5.24.1-3+deb9u7_all.deb ... Unpacking perl-modules-5.24 (5.24.1-3+deb9u7) ... Selecting previously unselected package libgdbm3:amd64. Preparing to unpack .../01-libgdbm3_1.8.3-14_amd64.deb ... Unpacking libgdbm3:amd64 (1.8.3-14) ... Selecting previously unselected package libperl5.24:amd64. Preparing to unpack .../02-libperl5.24_5.24.1-3+deb9u7_amd64.deb ... Unpacking libperl5.24:amd64 (5.24.1-3+deb9u7) ... Selecting previously unselected package perl. Preparing to unpack .../03-perl_5.24.1-3+deb9u7_amd64.deb ... Unpacking perl (5.24.1-3+deb9u7) ... Selecting previously unselected package lsb-base. Preparing to unpack .../04-lsb-base_9.20161125_all.deb ... Unpacking lsb-base (9.20161125) ... Selecting previously unselected package libpopt0:amd64. Preparing to unpack .../05-libpopt0_1.16-10+b2_amd64.deb ... Unpacking libpopt0:amd64 (1.16-10+b2) ... Selecting previously unselected package netbase. Preparing to unpack .../06-netbase_5.4_all.deb ... Unpacking netbase (5.4) ... Selecting previously unselected package libargtable2-0. Preparing to unpack .../07-libargtable2-0_13-1_amd64.deb ... Unpacking libargtable2-0 (13-1) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../08-libgomp1_6.3.0-18+deb9u1_amd64.deb ... Unpacking libgomp1:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package clustalo. Preparing to unpack .../09-clustalo_1.2.4-1_amd64.deb ... Unpacking clustalo (1.2.4-1) ... Selecting previously unselected package javascript-common. Preparing to unpack .../10-javascript-common_11_all.deb ... Unpacking javascript-common (11) ... Selecting previously unselected package libboost-system1.62.0:amd64. Preparing to unpack .../11-libboost-system1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-system1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-chrono1.62.0:amd64. Preparing to unpack .../12-libboost-chrono1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-chrono1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-date-time1.62.0:amd64. Preparing to unpack .../13-libboost-date-time1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-date-time1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-filesystem1.62.0:amd64. Preparing to unpack .../14-libboost-filesystem1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-filesystem1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-iostreams1.62.0:amd64. Preparing to unpack .../15-libboost-iostreams1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-iostreams1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-math1.62.0:amd64. Preparing to unpack .../16-libboost-math1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-math1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-program-options1.62.0:amd64. Preparing to unpack .../17-libboost-program-options1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-program-options1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-random1.62.0:amd64. Preparing to unpack .../18-libboost-random1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-random1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libicu57:amd64. Preparing to unpack .../19-libicu57_57.1-6+deb9u4_amd64.deb ... Unpacking libicu57:amd64 (57.1-6+deb9u4) ... Selecting previously unselected package libboost-regex1.62.0:amd64. Preparing to unpack .../20-libboost-regex1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-regex1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-thread1.62.0:amd64. Preparing to unpack .../21-libboost-thread1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-thread1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-timer1.62.0:amd64. Preparing to unpack .../22-libboost-timer1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-timer1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../23-libjs-jquery_3.1.1-2+deb9u1_all.deb ... Unpacking libjs-jquery (3.1.1-2+deb9u1) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../24-libjs-jquery-ui_1.12.1+dfsg-4_all.deb ... Unpacking libjs-jquery-ui (1.12.1+dfsg-4) ... Selecting previously unselected package liblog4cpp5v5. Preparing to unpack .../25-liblog4cpp5v5_1.1.1-3_amd64.deb ... Unpacking liblog4cpp5v5 (1.1.1-3) ... Selecting previously unselected package libzeep3.0v5. Preparing to unpack .../26-libzeep3.0v5_3.0.2-4+b2_amd64.deb ... Unpacking libzeep3.0v5 (3.0.2-4+b2) ... Selecting previously unselected package rsync. Preparing to unpack .../27-rsync_3.1.2-1+deb9u2_amd64.deb ... Unpacking rsync (3.1.2-1+deb9u2) ... Selecting previously unselected package mrs. Preparing to unpack .../28-mrs_6.0.5+dfsg-2+b2_amd64.deb ... Unpacking mrs (6.0.5+dfsg-2+b2) ... Selecting previously unselected package rename. Preparing to unpack .../29-rename_0.20-4_all.deb ... Unpacking rename (0.20-4) ... Setting up libargtable2-0 (13-1) ... Setting up libgomp1:amd64 (6.3.0-18+deb9u1) ... Setting up libjs-jquery (3.1.1-2+deb9u1) ... Setting up perl-modules-5.24 (5.24.1-3+deb9u7) ... Setting up libgdbm3:amd64 (1.8.3-14) ... Setting up libperl5.24:amd64 (5.24.1-3+deb9u7) ... Setting up clustalo (1.2.4-1) ... Setting up libpopt0:amd64 (1.16-10+b2) ... Setting up libboost-date-time1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up libboost-program-options1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up liblog4cpp5v5 (1.1.1-3) ... Setting up libicu57:amd64 (57.1-6+deb9u4) ... Setting up lsb-base (9.20161125) ... Setting up rsync (3.1.2-1+deb9u2) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libboost-iostreams1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up perl (5.24.1-3+deb9u7) ... update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode Processing triggers for libc-bin (2.24-11+deb9u4) ... Setting up libjs-jquery-ui (1.12.1+dfsg-4) ... Setting up libboost-math1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up javascript-common (11) ... Setting up libboost-system1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up netbase (5.4) ... Setting up rename (0.20-4) ... update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode Setting up libboost-thread1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up libboost-random1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up libboost-regex1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up libboost-filesystem1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up libboost-chrono1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up libboost-timer1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up libzeep3.0v5 (3.0.2-4+b2) ... Setting up mrs (6.0.5+dfsg-2+b2) ... Creating mrs-dba user... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', '-y', 'install', 'mrs=6.0.5+dfsg-2+b2'] 0m10.2s INFO: Running scripts post_install 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_install_exceptions'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_install_exceptions'] 0m10.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m10.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m11.1s DEBUG: No broken symlinks as far as we can find. 0m11.6s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', '-ac', '--ignore-obsolete'] 0m12.3s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', '-ac', '--ignore-obsolete'] 0m12.3s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m12.3s DUMP: 0.15.6 0m12.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m12.3s INFO: Running adequate version 0.15.6 now. 0m12.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'mrs'] 0m12.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'mrs'] 0m12.4s INFO: Running scripts pre_remove 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m13.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m13.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_exceptions'] 0m13.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/pre_remove_exceptions'] 0m13.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m13.2s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.10 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed clustalo clustalo 1.2.4-1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u1 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.25 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u1 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u1 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+b1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed javascript-common javascript-common 11 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.10 install ok installed libargtable2-0 libargtable2-0 13-1 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libboost-chrono1.62.0:amd64 libboost-chrono1.62.0 1.62.0+dfsg-4 install ok installed libboost-date-time1.62.0:amd64 libboost-date-time1.62.0 1.62.0+dfsg-4 install ok installed libboost-filesystem1.62.0:amd64 libboost-filesystem1.62.0 1.62.0+dfsg-4 install ok installed libboost-iostreams1.62.0:amd64 libboost-iostreams1.62.0 1.62.0+dfsg-4 install ok installed libboost-math1.62.0:amd64 libboost-math1.62.0 1.62.0+dfsg-4 install ok installed libboost-program-options1.62.0:amd64 libboost-program-options1.62.0 1.62.0+dfsg-4 install ok installed libboost-random1.62.0:amd64 libboost-random1.62.0 1.62.0+dfsg-4 install ok installed libboost-regex1.62.0:amd64 libboost-regex1.62.0 1.62.0+dfsg-4 install ok installed libboost-system1.62.0:amd64 libboost-system1.62.0 1.62.0+dfsg-4 install ok installed libboost-thread1.62.0:amd64 libboost-thread1.62.0 1.62.0+dfsg-4 install ok installed libboost-timer1.62.0:amd64 libboost-timer1.62.0 1.62.0+dfsg-4 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u3 install ok installed libgdbm3:amd64 libgdbm3 1.8.3-14 install ok installed libgomp1:amd64 libgomp1 6.3.0-18+deb9u1 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed libicu57:amd64 libicu57 57.1-6+deb9u4 install ok installed libjs-jquery libjs-jquery 3.1.1-2+deb9u1 install ok installed libjs-jquery-ui libjs-jquery-ui 1.12.1+dfsg-4 install ok installed liblog4cpp5v5 liblog4cpp5v5 1.1.1-3 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+b1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+b1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libperl5.24:amd64 libperl5.24 5.24.1-3+deb9u7 install ok installed libpopt0:amd64 libpopt0 1.16-10+b2 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u12 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u12 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed libzeep3.0v5 libzeep3.0v5 3.0.2-4+b2 install ok installed login login 1:4.4-4.1 install ok installed lsb-base lsb-base 9.20161125 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed mrs mrs 6.0.5+dfsg-2+b2 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed netbase netbase 5.4 install ok installed passwd passwd 1:4.4-4.1 install ok installed perl perl 5.24.1-3+deb9u7 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed perl-modules-5.24 perl-modules-5.24 5.24.1-3+deb9u7 install ok installed rename rename 0.20-4 install ok installed rsync rsync 3.1.2-1+deb9u2 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5 0m13.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m13.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', 'remove', 'clustalo', 'javascript-common', 'libargtable2-0', 'libboost-chrono1.62.0:amd64', 'libboost-date-time1.62.0:amd64', 'libboost-filesystem1.62.0:amd64', 'libboost-iostreams1.62.0:amd64', 'libboost-math1.62.0:amd64', 'libboost-program-options1.62.0:amd64', 'libboost-random1.62.0:amd64', 'libboost-regex1.62.0:amd64', 'libboost-system1.62.0:amd64', 'libboost-thread1.62.0:amd64', 'libboost-timer1.62.0:amd64', 'libgdbm3:amd64', 'libgomp1:amd64', 'libicu57:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'liblog4cpp5v5', 'libperl5.24:amd64', 'libpopt0:amd64', 'libzeep3.0v5', 'lsb-base', 'netbase', 'perl', 'perl-modules-5.24', 'rename', 'rsync', 'mrs'] 0m13.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: clustalo javascript-common libargtable2-0 libboost-chrono1.62.0 libboost-date-time1.62.0 libboost-filesystem1.62.0 libboost-iostreams1.62.0 libboost-math1.62.0 libboost-program-options1.62.0 libboost-random1.62.0 libboost-regex1.62.0 libboost-system1.62.0 libboost-thread1.62.0 libboost-timer1.62.0 libgdbm3 libgomp1 libicu57 libjs-jquery libjs-jquery-ui liblog4cpp5v5 libperl5.24 libpopt0 libzeep3.0v5 lsb-base mrs netbase perl perl-modules-5.24 rename rsync 0 upgraded, 0 newly installed, 30 to remove and 0 not upgraded. After this operation, 85.7 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6916 files and directories currently installed.) Removing mrs (6.0.5+dfsg-2+b2) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing clustalo (1.2.4-1) ... Removing javascript-common (11) ... Removing libargtable2-0 (13-1) ... Removing libboost-timer1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libboost-chrono1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libboost-date-time1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libzeep3.0v5 (3.0.2-4+b2) ... Removing libboost-filesystem1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libboost-iostreams1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libboost-math1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libboost-program-options1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libboost-random1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libboost-regex1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libboost-thread1.62.0:amd64 (1.62.0+dfsg-4) ... Removing libboost-system1.62.0:amd64 (1.62.0+dfsg-4) ... Removing rename (0.20-4) ... update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode Removing perl (5.24.1-3+deb9u7) ... Removing libperl5.24:amd64 (5.24.1-3+deb9u7) ... Removing libgdbm3:amd64 (1.8.3-14) ... Removing libgomp1:amd64 (6.3.0-18+deb9u1) ... Removing libicu57:amd64 (57.1-6+deb9u4) ... Removing libjs-jquery-ui (1.12.1+dfsg-4) ... Removing libjs-jquery (3.1.1-2+deb9u1) ... Removing liblog4cpp5v5 (1.1.1-3) ... Removing rsync (3.1.2-1+deb9u2) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libpopt0:amd64 (1.16-10+b2) ... Removing lsb-base (9.20161125) ... Removing netbase (5.4) ... Removing perl-modules-5.24 (5.24.1-3+deb9u7) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', 'remove', 'clustalo', 'javascript-common', 'libargtable2-0', 'libboost-chrono1.62.0:amd64', 'libboost-date-time1.62.0:amd64', 'libboost-filesystem1.62.0:amd64', 'libboost-iostreams1.62.0:amd64', 'libboost-math1.62.0:amd64', 'libboost-program-options1.62.0:amd64', 'libboost-random1.62.0:amd64', 'libboost-regex1.62.0:amd64', 'libboost-system1.62.0:amd64', 'libboost-thread1.62.0:amd64', 'libboost-timer1.62.0:amd64', 'libgdbm3:amd64', 'libgomp1:amd64', 'libicu57:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'liblog4cpp5v5', 'libperl5.24:amd64', 'libpopt0:amd64', 'libzeep3.0v5', 'lsb-base', 'netbase', 'perl', 'perl-modules-5.24', 'rename', 'rsync', 'mrs'] 0m13.9s INFO: Running scripts post_remove 0m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_remove_exceptions'] 0m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_remove_exceptions'] 0m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg', '--purge', 'clustalo', 'javascript-common', 'libargtable2-0', 'libboost-chrono1.62.0:amd64', 'libboost-date-time1.62.0:amd64', 'libboost-filesystem1.62.0:amd64', 'libboost-iostreams1.62.0:amd64', 'libboost-math1.62.0:amd64', 'libboost-program-options1.62.0:amd64', 'libboost-random1.62.0:amd64', 'libboost-regex1.62.0:amd64', 'libboost-system1.62.0:amd64', 'libboost-thread1.62.0:amd64', 'libboost-timer1.62.0:amd64', 'libgdbm3:amd64', 'libgomp1:amd64', 'libicu57:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'liblog4cpp5v5', 'libperl5.24:amd64', 'libpopt0:amd64', 'libzeep3.0v5', 'lsb-base', 'netbase', 'perl', 'perl-modules-5.24', 'rename', 'rsync'] 0m14.1s DUMP: dpkg: warning: ignoring request to remove clustalo which isn't installed (Reading database ... 4431 files and directories currently installed.) Purging configuration files for javascript-common (11) ... dpkg: warning: ignoring request to remove libargtable2-0 which isn't installed dpkg: warning: ignoring request to remove libboost-chrono1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-date-time1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-filesystem1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-iostreams1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-math1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-program-options1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-random1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-regex1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-system1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-thread1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost-timer1.62.0 which isn't installed dpkg: warning: ignoring request to remove libgdbm3 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libicu57 which isn't installed dpkg: warning: ignoring request to remove libjs-jquery which isn't installed Purging configuration files for libjs-jquery-ui (1.12.1+dfsg-4) ... dpkg: warning: ignoring request to remove liblog4cpp5v5 which isn't installed dpkg: warning: ignoring request to remove libperl5.24 which isn't installed dpkg: warning: ignoring request to remove libpopt0 which isn't installed dpkg: warning: ignoring request to remove libzeep3.0v5 which isn't installed dpkg: warning: ignoring request to remove lsb-base which isn't installed Purging configuration files for netbase (5.4) ... Purging configuration files for perl (5.24.1-3+deb9u7) ... dpkg: warning: ignoring request to remove perl-modules-5.24 which isn't installed dpkg: warning: ignoring request to remove rename which isn't installed Purging configuration files for rsync (3.1.2-1+deb9u2) ... 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg', '--purge', 'clustalo', 'javascript-common', 'libargtable2-0', 'libboost-chrono1.62.0:amd64', 'libboost-date-time1.62.0:amd64', 'libboost-filesystem1.62.0:amd64', 'libboost-iostreams1.62.0:amd64', 'libboost-math1.62.0:amd64', 'libboost-program-options1.62.0:amd64', 'libboost-random1.62.0:amd64', 'libboost-regex1.62.0:amd64', 'libboost-system1.62.0:amd64', 'libboost-thread1.62.0:amd64', 'libboost-timer1.62.0:amd64', 'libgdbm3:amd64', 'libgomp1:amd64', 'libicu57:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'liblog4cpp5v5', 'libperl5.24:amd64', 'libpopt0:amd64', 'libzeep3.0v5', 'lsb-base', 'netbase', 'perl', 'perl-modules-5.24', 'rename', 'rsync'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg', '--purge', 'mrs'] 0m14.2s DUMP: (Reading database ... 4416 files and directories currently installed.) Purging configuration files for mrs (6.0.5+dfsg-2+b2) ... 0m14.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg', '--purge', 'mrs'] 0m14.2s INFO: Running scripts post_purge 0m14.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_purge_exceptions'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_purge_exceptions'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg', '--purge', '--pending'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg', '--purge', '--pending'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg', '--remove', '--pending'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg', '--remove', '--pending'] 0m14.3s INFO: Running scripts post_test 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_test_exceptions'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'tmp/scripts/post_test_exceptions'] 0m14.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m14.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m15.0s DEBUG: No broken symlinks as far as we can find. 0m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg-divert', '--list'] 0m15.0s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'dpkg-divert', '--list'] 0m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', 'clean'] 0m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c', 'apt-get', 'clean'] 0m15.0s DEBUG: Recording chroot state 0m15.4s INFO: PASS: Installation and purging test. 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/shm'] 0m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/shm'] 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/console'] 0m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/console'] 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/ptmx'] 0m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/ptmx'] 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/pts'] 0m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/dev/pts'] 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/proc'] 0m15.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c/proc'] 0m15.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m15.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmppnbw5o7c'] 0m15.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmppnbw5o7c 0m15.9s INFO: PASS: All tests. 0m15.9s INFO: piuparts run ends. ret=0 End: 2023-03-03 05:55:31 GMT