Start: 2023-02-08 09:19:09 GMT [stretch] Package: libtrilinos-ifpack2-12 Source: trilinos Version: 12.10.1-3 Installed-Size: 5138 Maintainer: Debian Science Maintainers Architecture: amd64 Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libopenmpi2, libstdc++6 (>= 5.2), libtrilinos-amesos2-12, libtrilinos-kokkos12, libtrilinos-teuchos12, libtrilinos-thyra12, libtrilinos-tpetra12, libtrilinos-zoltan2-12 Description: next generation algebraic preconditioners - runtime files Homepage: http://trilinos.org Description-md5: 0fec478c269aa8bcdf3a1c3288f8467a Tag: role::shared-lib Section: libs Priority: extra Filename: pool/main/t/trilinos/libtrilinos-ifpack2-12_12.10.1-3_amd64.deb Size: 866644 MD5sum: e91d3e67fef0f45973637b47e566192c SHA256: a0f0e7f3f6b5d2a8603526c4367c23fdcf8769655167b7358e99a5826280269b [buster] Package: libtrilinos-ifpack2-12 Source: trilinos Version: 12.12.1-7 Installed-Size: 5861 Maintainer: Debian Science Maintainers Architecture: amd64 Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libopenmpi3, libptscotch-6.0, libscotch-6.0, libstdc++6 (>= 5.2), libtrilinos-amesos2-12, libtrilinos-kokkos12, libtrilinos-teuchos12, libtrilinos-thyra12, libtrilinos-tpetra12, libtrilinos-zoltan2-12 Description: next generation algebraic preconditioners - runtime files Multi-Arch: same Homepage: http://trilinos.org Description-md5: 0fec478c269aa8bcdf3a1c3288f8467a Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/t/trilinos/libtrilinos-ifpack2-12_12.12.1-7_amd64.deb Size: 1008552 MD5sum: 4ec238e457ae06d6eb4dd7f4ceafa88c SHA256: b37b9bbc23ddfa553f189a4e5a7690c52d3ddf12fa708130800d47c3a33436da Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --upgrade-before-dist-upgrade --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d buster -B /srv/piuparts.debian.org/slave/refchroot/stretch2Xbuster/reference-chroot-metadata.dat --apt libtrilinos-ifpack2-12=12.12.1-7 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --upgrade-before-dist-upgrade --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d buster -B /srv/piuparts.debian.org/slave/refchroot/stretch2Xbuster/reference-chroot-metadata.dat --apt libtrilinos-ifpack2-12=12.12.1-7 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpkj9ix7do 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpkj9ix7do 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.6s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/proc'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/proc'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/pts'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/pts'] 0m1.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/ptmx'] 0m1.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/ptmx'] 0m1.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/console'] 0m1.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/console'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/shm'] 0m1.7s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/shm'] 0m1.7s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main 0m1.7s DEBUG: Created policy-rc.d and chmodded it. 0m1.7s DEBUG: Created resolv.conf. 0m1.7s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpkj9ix7do/tmp/scripts/ 0m1.7s INFO: Running scripts post_chroot_unpack 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', 'update'] 0m2.6s DUMP: Ign:1 http://deb.debian.org/debian stretch InRelease Hit:2 http://deb.debian.org/debian stretch Release Reading package lists... 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', 'update'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-yf', 'dist-upgrade'] 0m2.9s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-yf', 'dist-upgrade'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.2s DUMP: 660e5103244a20b75ca08c3f8741e16e - 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.2s INFO: Running scripts post_setup 0m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_dummy_users'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_dummy_users'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_forbid_home'] 0m3.9s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_forbid_home'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.9s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' '/bin/sync' -> 'true' 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_minimize'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_minimize'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_zz_backports'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_setup_zz_backports'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.9s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.10 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u1 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.25 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u1 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u1 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+b1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.10 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+b1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+b1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u12 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u12 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed login login 1:4.4-4.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed passwd passwd 1:4.4-4.1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.9s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/stretch2Xbuster/reference-chroot-metadata.dat 0m4.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m4.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m4.2s INFO: Running scripts is_testable 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/is_testable_uninstallable'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/is_testable_uninstallable'] 0m4.2s INFO: Running scripts pre_test 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_test_exceptions'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_test_exceptions'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_test_root_password'] 0m4.2s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_test_root_password'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'show', '--no-all-versions', 'libtrilinos-ifpack2-12'] 0m4.5s DUMP: Package: libtrilinos-ifpack2-12 Source: trilinos Version: 12.10.1-3 Installed-Size: 5138 Maintainer: Debian Science Maintainers Architecture: amd64 Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libopenmpi2, libstdc++6 (>= 5.2), libtrilinos-amesos2-12, libtrilinos-kokkos12, libtrilinos-teuchos12, libtrilinos-thyra12, libtrilinos-tpetra12, libtrilinos-zoltan2-12 Description-en: next generation algebraic preconditioners - runtime files Ifpack2 provides incomplete factorizations, relaxations, and domain decomposition operators for linear algebra objects (sparse matrices, operators, and dense vectors and multivectors) provided by the Tpetra package. You may use these operators however you wish: for example as preconditioners in an iterative solver, or as smoothers for algebraic multigrid. . This package contains the dynamic libraries. Description-md5: 0fec478c269aa8bcdf3a1c3288f8467a Homepage: http://trilinos.org Tag: role::shared-lib Section: libs Priority: extra Filename: pool/main/t/trilinos/libtrilinos-ifpack2-12_12.10.1-3_amd64.deb Size: 866644 MD5sum: e91d3e67fef0f45973637b47e566192c SHA256: a0f0e7f3f6b5d2a8603526c4367c23fdcf8769655167b7358e99a5826280269b 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'show', '--no-all-versions', 'libtrilinos-ifpack2-12'] 0m4.5s INFO: apt-cache knows about the following packages: libtrilinos-ifpack2-12 0m4.5s INFO: Running scripts pre_install 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_database-server'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_database-server'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_exceptions'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_exceptions'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_extras'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_extras'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy'] 0m4.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy', 'libtrilinos-ifpack2-12'] 0m4.6s DUMP: libtrilinos-ifpack2-12: Installed: (none) Candidate: 12.10.1-3 Version table: 12.10.1-3 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy', 'libtrilinos-ifpack2-12'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-y', 'install', 'libtrilinos-ifpack2-12'] 0m10.5s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: libaec0 libblacs-openmpi1 libblas-common libblas3 libfabric1 libgfortran3 libhdf5-openmpi-100 libhwloc-plugins libhwloc5 libibverbs1 libicu57 liblapack3 libltdl7 libmumps-4.10.0 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi2 libpciaccess0 libpsm-infinipath1 libquadmath0 librdmacm1 libscalapack-openmpi1 libsz2 libtrilinos-amesos12 libtrilinos-amesos2-12 libtrilinos-epetra12 libtrilinos-epetraext12 libtrilinos-kokkos12 libtrilinos-rtop12 libtrilinos-teuchos12 libtrilinos-thyra12 libtrilinos-tpetra12 libtrilinos-triutils12 libtrilinos-zoltan2-12 libxml2 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common Suggested packages: libhwloc-contrib-plugins pciutils scalapack-doc opencl-icd gfortran Recommended packages: xml-core The following NEW packages will be installed: libaec0 libblacs-openmpi1 libblas-common libblas3 libfabric1 libgfortran3 libhdf5-openmpi-100 libhwloc-plugins libhwloc5 libibverbs1 libicu57 liblapack3 libltdl7 libmumps-4.10.0 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi2 libpciaccess0 libpsm-infinipath1 libquadmath0 librdmacm1 libscalapack-openmpi1 libsz2 libtrilinos-amesos12 libtrilinos-amesos2-12 libtrilinos-epetra12 libtrilinos-epetraext12 libtrilinos-ifpack2-12 libtrilinos-kokkos12 libtrilinos-rtop12 libtrilinos-teuchos12 libtrilinos-thyra12 libtrilinos-tpetra12 libtrilinos-triutils12 libtrilinos-zoltan2-12 libxml2 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common 0 upgraded, 41 newly installed, 0 to remove and 0 not upgraded. Need to get 26.6 MB of archives. After this operation, 111 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian stretch/main amd64 libicu57 amd64 57.1-6+deb9u4 [7699 kB] Get:2 http://deb.debian.org/debian stretch/main amd64 libxml2 amd64 2.9.4+dfsg1-2.2+deb9u2 [920 kB] Get:3 http://deb.debian.org/debian stretch/main amd64 libaec0 amd64 0.3.2-1 [18.5 kB] Get:4 http://deb.debian.org/debian stretch/main amd64 libblas-common amd64 3.7.0-2 [14.2 kB] Get:5 http://deb.debian.org/debian stretch/main amd64 libquadmath0 amd64 6.3.0-18+deb9u1 [131 kB] Get:6 http://deb.debian.org/debian stretch/main amd64 libgfortran3 amd64 6.3.0-18+deb9u1 [265 kB] Get:7 http://deb.debian.org/debian stretch/main amd64 libblas3 amd64 3.7.0-2 [155 kB] Get:8 http://deb.debian.org/debian stretch/main amd64 libnl-3-200 amd64 3.2.27-2 [61.5 kB] Get:9 http://deb.debian.org/debian stretch/main amd64 libnl-route-3-200 amd64 3.2.27-2 [136 kB] Get:10 http://deb.debian.org/debian stretch/main amd64 libibverbs1 amd64 1.2.1-2 [39.3 kB] Get:11 http://deb.debian.org/debian stretch/main amd64 libpsm-infinipath1 amd64 3.3+19.g67c0807.open-3 [169 kB] Get:12 http://deb.debian.org/debian stretch/main amd64 librdmacm1 amd64 1.1.0-2 [49.4 kB] Get:13 http://deb.debian.org/debian stretch/main amd64 libfabric1 amd64 1.4.0-1 [259 kB] Get:14 http://deb.debian.org/debian stretch/main amd64 liblapack3 amd64 3.7.0-2 [2141 kB] Get:15 http://deb.debian.org/debian stretch/main amd64 libltdl7 amd64 2.4.6-2 [389 kB] Get:16 http://deb.debian.org/debian stretch/main amd64 libnuma1 amd64 2.0.11-2.1 [33.3 kB] Get:17 http://deb.debian.org/debian stretch/main amd64 libpciaccess0 amd64 0.13.4-1+b2 [50.0 kB] Get:18 http://deb.debian.org/debian stretch/main amd64 libsz2 amd64 0.3.2-1 [5730 B] Get:19 http://deb.debian.org/debian stretch/main amd64 libhwloc5 amd64 1.11.5-1 [105 kB] Get:20 http://deb.debian.org/debian stretch/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1 [36.8 kB] Get:21 http://deb.debian.org/debian stretch/main amd64 libhwloc-plugins amd64 1.11.5-1 [16.1 kB] Get:22 http://deb.debian.org/debian stretch/main amd64 libopenmpi2 amd64 2.0.2-2 [2008 kB] Get:23 http://deb.debian.org/debian stretch/main amd64 openmpi-common all 2.0.2-2 [149 kB] Get:24 http://deb.debian.org/debian stretch/main amd64 openmpi-bin amd64 2.0.2-2 [186 kB] Get:25 http://deb.debian.org/debian stretch/main amd64 mpi-default-bin amd64 1.8 [4050 B] Get:26 http://deb.debian.org/debian stretch/main amd64 libblacs-openmpi1 amd64 1.1-38 [55.8 kB] Get:27 http://deb.debian.org/debian stretch/main amd64 libhdf5-openmpi-100 amd64 1.10.0-patch1+docs-3+deb9u1 [1312 kB] Get:28 http://deb.debian.org/debian stretch/main amd64 libscalapack-openmpi1 amd64 1.8.0-13 [2209 kB] Get:29 http://deb.debian.org/debian stretch/main amd64 libmumps-4.10.0 amd64 4.10.0.dfsg-4+b2 [916 kB] Get:30 http://deb.debian.org/debian stretch/main amd64 libtrilinos-kokkos12 amd64 12.10.1-3 [35.1 kB] Get:31 http://deb.debian.org/debian stretch/main amd64 libtrilinos-teuchos12 amd64 12.10.1-3 [1005 kB] Get:32 http://deb.debian.org/debian stretch/main amd64 libtrilinos-epetra12 amd64 12.10.1-3 [405 kB] Get:33 http://deb.debian.org/debian stretch/main amd64 libtrilinos-triutils12 amd64 12.10.1-3 [122 kB] Get:34 http://deb.debian.org/debian stretch/main amd64 libtrilinos-epetraext12 amd64 12.10.1-3 [412 kB] Get:35 http://deb.debian.org/debian stretch/main amd64 libtrilinos-amesos12 amd64 12.10.1-3 [188 kB] Get:36 http://deb.debian.org/debian stretch/main amd64 libtrilinos-tpetra12 amd64 12.10.1-3 [2054 kB] Get:37 http://deb.debian.org/debian stretch/main amd64 libtrilinos-amesos2-12 amd64 12.10.1-3 [193 kB] Get:38 http://deb.debian.org/debian stretch/main amd64 libtrilinos-rtop12 amd64 12.10.1-3 [123 kB] Get:39 http://deb.debian.org/debian stretch/main amd64 libtrilinos-thyra12 amd64 12.10.1-3 [1490 kB] Get:40 http://deb.debian.org/debian stretch/main amd64 libtrilinos-zoltan2-12 amd64 12.10.1-3 [140 kB] Get:41 http://deb.debian.org/debian stretch/main amd64 libtrilinos-ifpack2-12 amd64 12.10.1-3 [867 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 26.6 MB in 1s (19.5 MB/s) Selecting previously unselected package libicu57:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4411 files and directories currently installed.) Preparing to unpack .../00-libicu57_57.1-6+deb9u4_amd64.deb ... Unpacking libicu57:amd64 (57.1-6+deb9u4) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../01-libxml2_2.9.4+dfsg1-2.2+deb9u2_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u2) ... Selecting previously unselected package libaec0:amd64. Preparing to unpack .../02-libaec0_0.3.2-1_amd64.deb ... Unpacking libaec0:amd64 (0.3.2-1) ... Selecting previously unselected package libblas-common. Preparing to unpack .../03-libblas-common_3.7.0-2_amd64.deb ... Unpacking libblas-common (3.7.0-2) ... Selecting previously unselected package libquadmath0:amd64. Preparing to unpack .../04-libquadmath0_6.3.0-18+deb9u1_amd64.deb ... Unpacking libquadmath0:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libgfortran3:amd64. Preparing to unpack .../05-libgfortran3_6.3.0-18+deb9u1_amd64.deb ... Unpacking libgfortran3:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libblas3. Preparing to unpack .../06-libblas3_3.7.0-2_amd64.deb ... Unpacking libblas3 (3.7.0-2) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../07-libnl-3-200_3.2.27-2_amd64.deb ... Unpacking libnl-3-200:amd64 (3.2.27-2) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../08-libnl-route-3-200_3.2.27-2_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.2.27-2) ... Selecting previously unselected package libibverbs1. Preparing to unpack .../09-libibverbs1_1.2.1-2_amd64.deb ... Unpacking libibverbs1 (1.2.1-2) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../10-libpsm-infinipath1_3.3+19.g67c0807.open-3_amd64.deb ... Unpacking libpsm-infinipath1 (3.3+19.g67c0807.open-3) ... Selecting previously unselected package librdmacm1. Preparing to unpack .../11-librdmacm1_1.1.0-2_amd64.deb ... Unpacking librdmacm1 (1.1.0-2) ... Selecting previously unselected package libfabric1. Preparing to unpack .../12-libfabric1_1.4.0-1_amd64.deb ... Unpacking libfabric1 (1.4.0-1) ... Selecting previously unselected package liblapack3. Preparing to unpack .../13-liblapack3_3.7.0-2_amd64.deb ... Unpacking liblapack3 (3.7.0-2) ... Selecting previously unselected package libltdl7:amd64. Preparing to unpack .../14-libltdl7_2.4.6-2_amd64.deb ... Unpacking libltdl7:amd64 (2.4.6-2) ... Selecting previously unselected package libnuma1:amd64. Preparing to unpack .../15-libnuma1_2.0.11-2.1_amd64.deb ... Unpacking libnuma1:amd64 (2.0.11-2.1) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../16-libpciaccess0_0.13.4-1+b2_amd64.deb ... Unpacking libpciaccess0:amd64 (0.13.4-1+b2) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../17-libsz2_0.3.2-1_amd64.deb ... Unpacking libsz2:amd64 (0.3.2-1) ... Selecting previously unselected package libhwloc5:amd64. Preparing to unpack .../18-libhwloc5_1.11.5-1_amd64.deb ... Unpacking libhwloc5:amd64 (1.11.5-1) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../19-ocl-icd-libopencl1_2.2.11-1_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1) ... Selecting previously unselected package libhwloc-plugins. 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Preparing to unpack .../26-libhdf5-openmpi-100_1.10.0-patch1+docs-3+deb9u1_amd64.deb ... Unpacking libhdf5-openmpi-100:amd64 (1.10.0-patch1+docs-3+deb9u1) ... Selecting previously unselected package libscalapack-openmpi1. Preparing to unpack .../27-libscalapack-openmpi1_1.8.0-13_amd64.deb ... Unpacking libscalapack-openmpi1 (1.8.0-13) ... Selecting previously unselected package libmumps-4.10.0. Preparing to unpack .../28-libmumps-4.10.0_4.10.0.dfsg-4+b2_amd64.deb ... Unpacking libmumps-4.10.0 (4.10.0.dfsg-4+b2) ... Selecting previously unselected package libtrilinos-kokkos12. Preparing to unpack .../29-libtrilinos-kokkos12_12.10.1-3_amd64.deb ... Unpacking libtrilinos-kokkos12 (12.10.1-3) ... Selecting previously unselected package libtrilinos-teuchos12. Preparing to unpack .../30-libtrilinos-teuchos12_12.10.1-3_amd64.deb ... Unpacking libtrilinos-teuchos12 (12.10.1-3) ... Selecting previously unselected package libtrilinos-epetra12. 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Unpacking libtrilinos-amesos2-12 (12.10.1-3) ... Selecting previously unselected package libtrilinos-rtop12. Preparing to unpack .../37-libtrilinos-rtop12_12.10.1-3_amd64.deb ... Unpacking libtrilinos-rtop12 (12.10.1-3) ... Selecting previously unselected package libtrilinos-thyra12. Preparing to unpack .../38-libtrilinos-thyra12_12.10.1-3_amd64.deb ... Unpacking libtrilinos-thyra12 (12.10.1-3) ... Selecting previously unselected package libtrilinos-zoltan2-12. Preparing to unpack .../39-libtrilinos-zoltan2-12_12.10.1-3_amd64.deb ... Unpacking libtrilinos-zoltan2-12 (12.10.1-3) ... Selecting previously unselected package libtrilinos-ifpack2-12. Preparing to unpack .../40-libtrilinos-ifpack2-12_12.10.1-3_amd64.deb ... Unpacking libtrilinos-ifpack2-12 (12.10.1-3) ... Setting up libquadmath0:amd64 (6.3.0-18+deb9u1) ... Setting up libaec0:amd64 (0.3.2-1) ... Setting up libblas-common (3.7.0-2) ... Setting up libnuma1:amd64 (2.0.11-2.1) ... Setting up libgfortran3:amd64 (6.3.0-18+deb9u1) ... Setting up libicu57:amd64 (57.1-6+deb9u4) ... Setting up libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u2) ... Setting up libpsm-infinipath1 (3.3+19.g67c0807.open-3) ... Setting up libblas3 (3.7.0-2) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up openmpi-common (2.0.2-2) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... Setting up libtrilinos-kokkos12 (12.10.1-3) ... Setting up libltdl7:amd64 (2.4.6-2) ... Setting up libpciaccess0:amd64 (0.13.4-1+b2) ... Setting up ocl-icd-libopencl1:amd64 (2.2.11-1) ... Setting up libnl-3-200:amd64 (3.2.27-2) ... Setting up libsz2:amd64 (0.3.2-1) ... Setting up liblapack3 (3.7.0-2) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libnl-route-3-200:amd64 (3.2.27-2) ... Setting up libhwloc5:amd64 (1.11.5-1) ... Setting up libhwloc-plugins (1.11.5-1) ... Setting up libibverbs1 (1.2.1-2) ... Setting up librdmacm1 (1.1.0-2) ... Setting up libfabric1 (1.4.0-1) ... Setting up libopenmpi2:amd64 (2.0.2-2) ... Setting up libhdf5-openmpi-100:amd64 (1.10.0-patch1+docs-3+deb9u1) ... Setting up openmpi-bin (2.0.2-2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode Setting up libtrilinos-teuchos12 (12.10.1-3) ... Setting up mpi-default-bin (1.8) ... Setting up libtrilinos-zoltan2-12 (12.10.1-3) ... Setting up libblacs-openmpi1 (1.1-38) ... Setting up libtrilinos-epetra12 (12.10.1-3) ... Setting up libtrilinos-triutils12 (12.10.1-3) ... Setting up libtrilinos-rtop12 (12.10.1-3) ... Setting up libtrilinos-tpetra12 (12.10.1-3) ... Setting up libscalapack-openmpi1 (1.8.0-13) ... Setting up libtrilinos-epetraext12 (12.10.1-3) ... Setting up libmumps-4.10.0 (4.10.0.dfsg-4+b2) ... Setting up libtrilinos-thyra12 (12.10.1-3) ... Setting up libtrilinos-amesos12 (12.10.1-3) ... Setting up libtrilinos-amesos2-12 (12.10.1-3) ... Setting up libtrilinos-ifpack2-12 (12.10.1-3) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-y', 'install', 'libtrilinos-ifpack2-12'] 0m10.5s INFO: Running scripts post_install 0m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_install_exceptions'] 0m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_install_exceptions'] 0m10.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m10.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m10.8s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpkj9ix7do to buster 0m10.8s DEBUG: sources.list: deb http://deb.debian.org/debian/ buster main 0m10.8s INFO: Running scripts pre_distupgrade 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_exceptions'] 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_exceptions'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', 'update'] 0m15.1s DUMP: Get:1 http://deb.debian.org/debian buster InRelease [122 kB] Get:2 http://deb.debian.org/debian buster/main amd64 Packages [7909 kB] Get:3 http://deb.debian.org/debian buster/main Translation-en [5969 kB] Fetched 14.0 MB in 3s (4351 kB/s) Reading package lists... 0m15.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', 'update'] 0m15.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-y', 'upgrade'] 0m23.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages have been kept back: apt bash dash dpkg e2fslibs e2fsprogs libapt-pkg5.0 libblas3 libcomerr2 libfabric1 libgcc1 liblapack3 libncursesw5 libquadmath0 libss2 libstdc++6 libtinfo5 libtrilinos-amesos12 libtrilinos-amesos2-12 libtrilinos-epetra12 libtrilinos-epetraext12 libtrilinos-ifpack2-12 libtrilinos-rtop12 libtrilinos-teuchos12 libtrilinos-thyra12 libtrilinos-tpetra12 libtrilinos-triutils12 libtrilinos-zoltan2-12 libxml2 login mount ncurses-base ncurses-bin openmpi-bin openmpi-common util-linux The following packages will be upgraded: adduser base-files base-passwd bsdutils coreutils debconf debian-archive-keyring debianutils diffutils findutils gpgv grep gzip hostname init-system-helpers libacl1 libaec0 libattr1 libaudit-common libaudit1 libblkid1 libbz2-1.0 libc-bin libc6 libcap-ng0 libdb5.3 libdebconfclient0 libfdisk1 libgcrypt20 libgpg-error0 libhwloc-plugins libhwloc5 libibverbs1 libltdl7 liblz4-1 liblzma5 libmount1 libnl-3-200 libnl-route-3-200 libnuma1 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpciaccess0 libpcre3 libpsm-infinipath1 librdmacm1 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsystemd0 libsz2 libtrilinos-kokkos12 libudev1 libuuid1 mpi-default-bin multiarch-support ocl-icd-libopencl1 passwd perl-base sed sensible-utils sysvinit-utils tar zlib1g 68 upgraded, 0 newly installed, 0 to remove and 36 not upgraded. Need to get 19.3 MB of archives. After this operation, 6704 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian buster/main amd64 base-files amd64 10.3+deb10u13 [69.9 kB] Get:2 http://deb.debian.org/debian buster/main amd64 bsdutils amd64 1:2.33.1-0.1 [121 kB] Get:3 http://deb.debian.org/debian buster/main amd64 libc6 amd64 2.28-10+deb10u1 [2863 kB] Get:4 http://deb.debian.org/debian buster/main amd64 libc-bin amd64 2.28-10+deb10u1 [795 kB] Get:5 http://deb.debian.org/debian buster/main amd64 coreutils amd64 8.30-3 [2708 kB] Get:6 http://deb.debian.org/debian buster/main amd64 debianutils amd64 4.8.6.1 [100 kB] Get:7 http://deb.debian.org/debian buster/main amd64 diffutils amd64 1:3.7-3 [371 kB] Get:8 http://deb.debian.org/debian buster/main amd64 findutils amd64 4.6.0+git+20190209-2 [684 kB] Get:9 http://deb.debian.org/debian buster/main amd64 grep amd64 3.3-1 [373 kB] Get:10 http://deb.debian.org/debian buster/main amd64 gzip amd64 1.9-3+deb10u1 [128 kB] Get:11 http://deb.debian.org/debian buster/main amd64 hostname amd64 3.21 [14.8 kB] Get:12 http://deb.debian.org/debian buster/main amd64 perl-base amd64 5.28.1-6+deb10u1 [1514 kB] Get:13 http://deb.debian.org/debian buster/main amd64 sed amd64 4.7-1 [310 kB] Get:14 http://deb.debian.org/debian buster/main amd64 tar amd64 1.30+dfsg-6 [780 kB] Get:15 http://deb.debian.org/debian buster/main amd64 libdebconfclient0 amd64 0.249 [49.1 kB] Get:16 http://deb.debian.org/debian buster/main amd64 base-passwd amd64 3.5.46 [56.7 kB] Get:17 http://deb.debian.org/debian buster/main amd64 init-system-helpers all 1.56+nmu1 [46.8 kB] Get:18 http://deb.debian.org/debian buster/main amd64 sysvinit-utils amd64 2.93-8 [78.4 kB] Get:19 http://deb.debian.org/debian buster/main amd64 debconf all 1.5.71+deb10u1 [145 kB] Get:20 http://deb.debian.org/debian buster/main amd64 libaudit-common all 1:2.8.4-3 [22.4 kB] Get:21 http://deb.debian.org/debian buster/main amd64 libcap-ng0 amd64 0.7.9-2 [14.3 kB] Get:22 http://deb.debian.org/debian buster/main amd64 libaudit1 amd64 1:2.8.4-3 [57.3 kB] Get:23 http://deb.debian.org/debian buster/main amd64 libpam0g amd64 1.3.1-5 [126 kB] Get:24 http://deb.debian.org/debian buster/main amd64 libpcre3 amd64 2:8.39-12 [341 kB] Get:25 http://deb.debian.org/debian buster/main amd64 libselinux1 amd64 2.8-1+b1 [86.9 kB] Get:26 http://deb.debian.org/debian buster/main amd64 libpam-modules-bin amd64 1.3.1-5 [107 kB] Get:27 http://deb.debian.org/debian buster/main amd64 libpam-modules amd64 1.3.1-5 [309 kB] Get:28 http://deb.debian.org/debian buster/main amd64 libgpg-error0 amd64 1.35-1 [71.1 kB] Get:29 http://deb.debian.org/debian buster/main amd64 libgcrypt20 amd64 1.8.4-5+deb10u1 [556 kB] Get:30 http://deb.debian.org/debian buster/main amd64 libsystemd0 amd64 241-7~deb10u8 [331 kB] Get:31 http://deb.debian.org/debian buster/main amd64 libpam-runtime all 1.3.1-5 [211 kB] Get:32 http://deb.debian.org/debian buster/main amd64 libsepol1 amd64 2.8-1 [263 kB] Get:33 http://deb.debian.org/debian buster/main amd64 libsemanage-common all 2.8-2 [17.7 kB] Get:34 http://deb.debian.org/debian buster/main amd64 libsemanage1 amd64 2.8-2 [96.5 kB] Get:35 http://deb.debian.org/debian buster/main amd64 libbz2-1.0 amd64 1.0.6-9.2~deb10u1 [45.3 kB] Get:36 http://deb.debian.org/debian buster/main amd64 passwd amd64 1:4.5-1.1 [1005 kB] Get:37 http://deb.debian.org/debian buster/main amd64 adduser all 3.118 [240 kB] Get:38 http://deb.debian.org/debian buster/main amd64 debian-archive-keyring all 2019.1+deb10u1 [93.5 kB] Get:39 http://deb.debian.org/debian buster/main amd64 zlib1g amd64 1:1.2.11.dfsg-1+deb10u1 [90.8 kB] Get:40 http://deb.debian.org/debian buster/main amd64 gpgv amd64 2.2.12-1+deb10u2 [584 kB] Get:41 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:42 http://deb.debian.org/debian buster/main amd64 libattr1 amd64 1:2.4.48-4 [21.3 kB] Get:43 http://deb.debian.org/debian buster/main amd64 libacl1 amd64 2.2.53-4 [30.4 kB] Get:44 http://deb.debian.org/debian buster/main amd64 libuuid1 amd64 2.33.1-0.1 [78.3 kB] Get:45 http://deb.debian.org/debian buster/main amd64 libblkid1 amd64 2.33.1-0.1 [195 kB] Get:46 http://deb.debian.org/debian buster/main amd64 libdb5.3 amd64 5.3.28+dfsg1-0.5 [683 kB] Get:47 http://deb.debian.org/debian buster/main amd64 libfdisk1 amd64 2.33.1-0.1 [234 kB] Get:48 http://deb.debian.org/debian buster/main amd64 liblz4-1 amd64 1.8.3-1+deb10u1 [53.3 kB] Get:49 http://deb.debian.org/debian buster/main amd64 liblzma5 amd64 5.2.4-1+deb10u1 [153 kB] Get:50 http://deb.debian.org/debian buster/main amd64 libmount1 amd64 2.33.1-0.1 [207 kB] Get:51 http://deb.debian.org/debian buster/main amd64 libsmartcols1 amd64 2.33.1-0.1 [150 kB] Get:52 http://deb.debian.org/debian buster/main amd64 libudev1 amd64 241-7~deb10u8 [151 kB] Get:53 http://deb.debian.org/debian buster/main amd64 libaec0 amd64 1.0.2-1 [20.1 kB] Get:54 http://deb.debian.org/debian buster/main amd64 libltdl7 amd64 2.4.6-9 [390 kB] Get:55 http://deb.debian.org/debian buster/main amd64 libnuma1 amd64 2.0.12-1 [26.2 kB] Get:56 http://deb.debian.org/debian buster/main amd64 libhwloc5 amd64 1.11.12-3 [111 kB] Get:57 http://deb.debian.org/debian buster/main amd64 libpciaccess0 amd64 0.14-1 [53.5 kB] Get:58 http://deb.debian.org/debian buster/main amd64 ocl-icd-libopencl1 amd64 2.2.12-2 [37.5 kB] Get:59 http://deb.debian.org/debian buster/main amd64 libhwloc-plugins amd64 1.11.12-3 [17.4 kB] Get:60 http://deb.debian.org/debian buster/main amd64 libnl-route-3-200 amd64 3.4.0-1 [162 kB] Get:61 http://deb.debian.org/debian buster/main amd64 libnl-3-200 amd64 3.4.0-1 [63.0 kB] Get:62 http://deb.debian.org/debian buster/main amd64 libibverbs1 amd64 22.1-1 [51.2 kB] Get:63 http://deb.debian.org/debian buster/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6 [168 kB] Get:64 http://deb.debian.org/debian buster/main amd64 librdmacm1 amd64 22.1-1 [65.3 kB] Get:65 http://deb.debian.org/debian buster/main amd64 libsz2 amd64 1.0.2-1 [6676 B] Get:66 http://deb.debian.org/debian buster/main amd64 libtrilinos-kokkos12 amd64 12.12.1-7 [35.6 kB] Get:67 http://deb.debian.org/debian buster/main amd64 mpi-default-bin amd64 1.13 [4672 B] Get:68 http://deb.debian.org/debian buster/main amd64 multiarch-support amd64 2.28-10+deb10u1 [216 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 19.3 MB in 0s (44.1 MB/s) (Reading database ... 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Installing new version of config file /etc/apt/trusted.gpg.d/debian-archive-buster-security-automatic.gpg ... Installing new version of config file /etc/apt/trusted.gpg.d/debian-archive-buster-stable.gpg ... Installing new version of config file /etc/apt/trusted.gpg.d/debian-archive-stretch-automatic.gpg ... Installing new version of config file /etc/apt/trusted.gpg.d/debian-archive-stretch-security-automatic.gpg ... Installing new version of config file /etc/apt/trusted.gpg.d/debian-archive-stretch-stable.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-jessie-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-jessie-security-automatic.gpg ... Removing obsolete conffile /etc/apt/trusted.gpg.d/debian-archive-jessie-stable.gpg ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5099 files and directories currently installed.) Preparing to unpack .../libfdisk1_2.33.1-0.1_amd64.deb ... Unpacking libfdisk1:amd64 (2.33.1-0.1) over (2.29.2-1+deb9u1) ... Setting up libfdisk1:amd64 (2.33.1-0.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5099 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.8.3-1+deb10u1_amd64.deb ... Unpacking liblz4-1:amd64 (1.8.3-1+deb10u1) over (0.0~r131-2+b1) ... Setting up liblz4-1:amd64 (1.8.3-1+deb10u1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5097 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.33.1-0.1_amd64.deb ... Unpacking libsmartcols1:amd64 (2.33.1-0.1) over (2.29.2-1+deb9u1) ... Setting up libsmartcols1:amd64 (2.33.1-0.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5097 files and directories currently installed.) Preparing to unpack .../libudev1_241-7~deb10u8_amd64.deb ... Unpacking libudev1:amd64 (241-7~deb10u8) over (232-25+deb9u12) ... Setting up libudev1:amd64 (241-7~deb10u8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5097 files and directories currently installed.) Preparing to unpack .../00-libaec0_1.0.2-1_amd64.deb ... Unpacking libaec0:amd64 (1.0.2-1) over (0.3.2-1) ... Preparing to unpack .../01-libltdl7_2.4.6-9_amd64.deb ... Unpacking libltdl7:amd64 (2.4.6-9) over (2.4.6-2) ... Preparing to unpack .../02-libnuma1_2.0.12-1_amd64.deb ... Unpacking libnuma1:amd64 (2.0.12-1) over (2.0.11-2.1) ... Preparing to unpack .../03-libhwloc5_1.11.12-3_amd64.deb ... 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Preparing to unpack .../11-librdmacm1_22.1-1_amd64.deb ... Unpacking librdmacm1:amd64 (22.1-1) over (1.1.0-2) ... Preparing to unpack .../12-libsz2_1.0.2-1_amd64.deb ... Unpacking libsz2:amd64 (1.0.2-1) over (0.3.2-1) ... Preparing to unpack .../13-libtrilinos-kokkos12_12.12.1-7_amd64.deb ... Unpacking libtrilinos-kokkos12:amd64 (12.12.1-7) over (12.10.1-3) ... Preparing to unpack .../14-mpi-default-bin_1.13_amd64.deb ... Unpacking mpi-default-bin (1.13) over (1.8) ... Preparing to unpack .../15-multiarch-support_2.28-10+deb10u1_amd64.deb ... Unpacking multiarch-support (2.28-10+deb10u1) over (2.24-11+deb9u4) ... Setting up mpi-default-bin (1.13) ... Setting up libaec0:amd64 (1.0.2-1) ... Setting up libnuma1:amd64 (2.0.12-1) ... Setting up multiarch-support (2.28-10+deb10u1) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Processing triggers for libc-bin (2.28-10+deb10u1) ... Setting up libtrilinos-kokkos12:amd64 (12.12.1-7) ... Setting up libltdl7:amd64 (2.4.6-9) ... Setting up libpciaccess0:amd64 (0.14-1) ... Setting up ocl-icd-libopencl1:amd64 (2.2.12-2) ... Setting up libnl-3-200:amd64 (3.4.0-1) ... Setting up libsz2:amd64 (1.0.2-1) ... Setting up libnl-route-3-200:amd64 (3.4.0-1) ... Setting up libhwloc5:amd64 (1.11.12-3) ... Setting up libhwloc-plugins:amd64 (1.11.12-3) ... Setting up libibverbs1:amd64 (22.1-1) ... Setting up librdmacm1:amd64 (22.1-1) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... 0m23.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-y', 'upgrade'] 0m23.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-yf', 'dist-upgrade'] 0m32.4s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libblacs-openmpi1 libblas-common libgfortran3 libicu57 libmumps-4.10.0 libmumps-5.1.2 libopenmpi2 libscalapack-openmpi1 libscalapack-openmpi2.0 libtrilinos-amesos12 mpi-default-bin Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libhdf5-openmpi-100 The following NEW packages will be installed: fdisk gcc-8-base libbsd0 libcom-err2 libedit2 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libext2fs2 libffi6 libgfortran5 libgmp10 libgnutls30 libgssapi-krb5-2 libhdf5-openmpi-103 libhogweed4 libicu63 libidn2-0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libmumps-5.1.2 libncursesw6 libnettle6 libopenmpi3 libp11-kit0 libpmix2 libpsm2-2 libptscotch-6.0 libscalapack-openmpi2.0 libscotch-6.0 libseccomp2 libssl1.1 libtasn1-6 libtinfo6 libtrilinos-trilinosss12 libunistring2 libzstd1 openssh-client The following packages will be upgraded: apt bash dash dpkg e2fslibs e2fsprogs libapt-pkg5.0 libblas3 libcomerr2 libfabric1 libgcc1 liblapack3 libncursesw5 libquadmath0 libss2 libstdc++6 libtinfo5 libtrilinos-amesos12 libtrilinos-amesos2-12 libtrilinos-epetra12 libtrilinos-epetraext12 libtrilinos-ifpack2-12 libtrilinos-rtop12 libtrilinos-teuchos12 libtrilinos-thyra12 libtrilinos-tpetra12 libtrilinos-triutils12 libtrilinos-zoltan2-12 libxml2 login mount ncurses-base ncurses-bin openmpi-bin openmpi-common util-linux 36 upgraded, 40 newly installed, 1 to remove and 0 not upgraded. Need to get 45.0 MB of archives. After this operation, 80.1 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian buster/main amd64 libtinfo6 amd64 6.1+20181013-2+deb10u2 [325 kB] Get:2 http://deb.debian.org/debian buster/main amd64 bash amd64 5.0-4 [1378 kB] Get:3 http://deb.debian.org/debian buster/main amd64 libzstd1 amd64 1.3.8+dfsg-3+deb10u2 [237 kB] Get:4 http://deb.debian.org/debian buster/main amd64 libgmp10 amd64 2:6.1.2+dfsg-4+deb10u1 [251 kB] Get:5 http://deb.debian.org/debian buster/main amd64 libnettle6 amd64 3.4.1-1+deb10u1 [215 kB] Get:6 http://deb.debian.org/debian buster/main amd64 libhogweed4 amd64 3.4.1-1+deb10u1 [141 kB] Get:7 http://deb.debian.org/debian buster/main amd64 libunistring2 amd64 0.9.10-1 [381 kB] Get:8 http://deb.debian.org/debian buster/main amd64 libidn2-0 amd64 2.0.5-1+deb10u1 [76.7 kB] Get:9 http://deb.debian.org/debian buster/main amd64 libffi6 amd64 3.2.1-9 [20.8 kB] Get:10 http://deb.debian.org/debian buster/main amd64 libp11-kit0 amd64 0.23.15-2+deb10u1 [316 kB] Get:11 http://deb.debian.org/debian buster/main amd64 libtasn1-6 amd64 4.13-3 [51.9 kB] Get:12 http://deb.debian.org/debian buster/main amd64 libgnutls30 amd64 3.6.7-4+deb10u8 [1126 kB] Get:13 http://deb.debian.org/debian buster/main amd64 libseccomp2 amd64 2.3.3-4 [41.4 kB] Get:14 http://deb.debian.org/debian buster/main amd64 gcc-8-base amd64 8.3.0-6 [191 kB] Get:15 http://deb.debian.org/debian buster/main amd64 libgcc1 amd64 1:8.3.0-6 [40.6 kB] Get:16 http://deb.debian.org/debian buster/main amd64 libstdc++6 amd64 8.3.0-6 [395 kB] Get:17 http://deb.debian.org/debian buster/main amd64 libapt-pkg5.0 amd64 1.8.2.3 [967 kB] Get:18 http://deb.debian.org/debian buster/main amd64 apt amd64 1.8.2.3 [1418 kB] Get:19 http://deb.debian.org/debian buster/main amd64 dpkg amd64 1.19.8 [2210 kB] Get:20 http://deb.debian.org/debian buster/main amd64 dash amd64 0.5.10.2-5 [112 kB] Get:21 http://deb.debian.org/debian buster/main amd64 libcom-err2 amd64 1.44.5-1+deb10u3 [68.4 kB] Get:22 http://deb.debian.org/debian buster/main amd64 libcomerr2 amd64 1.44.5-1+deb10u3 [64.2 kB] Get:23 http://deb.debian.org/debian buster/main amd64 libext2fs2 amd64 1.44.5-1+deb10u3 [221 kB] Get:24 http://deb.debian.org/debian buster/main amd64 e2fslibs amd64 1.44.5-1+deb10u3 [64.2 kB] Get:25 http://deb.debian.org/debian buster/main amd64 e2fsprogs amd64 1.44.5-1+deb10u3 [576 kB] Get:26 http://deb.debian.org/debian buster/main amd64 libncursesw6 amd64 6.1+20181013-2+deb10u2 [132 kB] Get:27 http://deb.debian.org/debian buster/main amd64 fdisk amd64 2.33.1-0.1 [179 kB] Get:28 http://deb.debian.org/debian buster/main amd64 login amd64 1:4.5-1.1 [751 kB] Get:29 http://deb.debian.org/debian buster/main amd64 util-linux amd64 2.33.1-0.1 [1062 kB] Get:30 http://deb.debian.org/debian buster/main amd64 mount amd64 2.33.1-0.1 [174 kB] Get:31 http://deb.debian.org/debian buster/main amd64 ncurses-bin amd64 6.1+20181013-2+deb10u2 [406 kB] Get:32 http://deb.debian.org/debian buster/main amd64 libtinfo5 amd64 6.1+20181013-2+deb10u2 [321 kB] Get:33 http://deb.debian.org/debian buster/main amd64 libncursesw5 amd64 6.1+20181013-2+deb10u2 [118 kB] Get:34 http://deb.debian.org/debian buster/main amd64 ncurses-base all 6.1+20181013-2+deb10u2 [258 kB] Get:35 http://deb.debian.org/debian buster/main amd64 libquadmath0 amd64 8.3.0-6 [133 kB] Get:36 http://deb.debian.org/debian buster/main amd64 libgfortran5 amd64 8.3.0-6 [581 kB] Get:37 http://deb.debian.org/debian buster/main amd64 libevent-2.1-6 amd64 2.1.8-stable-4 [177 kB] Get:38 http://deb.debian.org/debian buster/main amd64 libevent-core-2.1-6 amd64 2.1.8-stable-4 [129 kB] Get:39 http://deb.debian.org/debian buster/main amd64 libevent-pthreads-2.1-6 amd64 2.1.8-stable-4 [47.9 kB] Get:40 http://deb.debian.org/debian buster/main amd64 libpsm2-2 amd64 11.2.78-1 [177 kB] Get:41 http://deb.debian.org/debian buster/main amd64 libfabric1 amd64 1.6.2-3 [396 kB] Get:42 http://deb.debian.org/debian buster/main amd64 libpmix2 amd64 3.1.2-3 [498 kB] Get:43 http://deb.debian.org/debian buster/main amd64 libopenmpi3 amd64 3.1.3-11 [2191 kB] Get:44 http://deb.debian.org/debian buster/main amd64 libtrilinos-epetraext12 amd64 12.12.1-7 [418 kB] Get:45 http://deb.debian.org/debian buster/main amd64 libhdf5-openmpi-103 amd64 1.10.4+repack-10 [1373 kB] Get:46 http://deb.debian.org/debian buster/main amd64 libblas3 amd64 3.8.0-2 [148 kB] Get:47 http://deb.debian.org/debian buster/main amd64 liblapack3 amd64 3.8.0-2 [2110 kB] Get:48 http://deb.debian.org/debian buster/main amd64 libtrilinos-teuchos12 amd64 12.12.1-7 [989 kB] Get:49 http://deb.debian.org/debian buster/main amd64 libtrilinos-epetra12 amd64 12.12.1-7 [417 kB] Get:50 http://deb.debian.org/debian buster/main amd64 libtrilinos-triutils12 amd64 12.12.1-7 [121 kB] Get:51 http://deb.debian.org/debian buster/main amd64 libss2 amd64 1.44.5-1+deb10u3 [72.9 kB] Get:52 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get:53 http://deb.debian.org/debian buster/main amd64 libedit2 amd64 3.1-20181209-1 [94.0 kB] Get:54 http://deb.debian.org/debian buster/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:55 http://deb.debian.org/debian buster/main amd64 libkrb5support0 amd64 1.17-3+deb10u4 [65.9 kB] Get:56 http://deb.debian.org/debian buster/main amd64 libk5crypto3 amd64 1.17-3+deb10u4 [122 kB] Get:57 http://deb.debian.org/debian buster/main amd64 libssl1.1 amd64 1.1.1n-0+deb10u3 [1551 kB] Get:58 http://deb.debian.org/debian buster/main amd64 libkrb5-3 amd64 1.17-3+deb10u4 [369 kB] Get:59 http://deb.debian.org/debian buster/main amd64 libgssapi-krb5-2 amd64 1.17-3+deb10u4 [158 kB] Get:60 http://deb.debian.org/debian buster/main amd64 openssh-client amd64 1:7.9p1-10+deb10u2 [782 kB] Get:61 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u3 [8293 kB] Get:62 http://deb.debian.org/debian buster/main amd64 libscalapack-openmpi2.0 amd64 2.0.2-7+b2 [1467 kB] Get:63 http://deb.debian.org/debian buster/main amd64 libmumps-5.1.2 amd64 5.1.2-4+b2 [1125 kB] Get:64 http://deb.debian.org/debian buster/main amd64 libscotch-6.0 amd64 6.0.6-2 [422 kB] Get:65 http://deb.debian.org/debian buster/main amd64 libptscotch-6.0 amd64 6.0.6-2 [660 kB] Get:66 http://deb.debian.org/debian buster/main amd64 libtrilinos-trilinosss12 amd64 12.12.1-7 [87.8 kB] Get:67 http://deb.debian.org/debian buster/main amd64 libtrilinos-amesos12 amd64 12.12.1-7 [110 kB] Get:68 http://deb.debian.org/debian buster/main amd64 libtrilinos-tpetra12 amd64 12.12.1-7 [2004 kB] Get:69 http://deb.debian.org/debian buster/main amd64 libtrilinos-amesos2-12 amd64 12.12.1-7 [212 kB] Get:70 http://deb.debian.org/debian buster/main amd64 libtrilinos-rtop12 amd64 12.12.1-7 [75.8 kB] Get:71 http://deb.debian.org/debian buster/main amd64 libtrilinos-thyra12 amd64 12.12.1-7 [799 kB] Get:72 http://deb.debian.org/debian buster/main amd64 libtrilinos-zoltan2-12 amd64 12.12.1-7 [117 kB] Get:73 http://deb.debian.org/debian buster/main amd64 libtrilinos-ifpack2-12 amd64 12.12.1-7 [1009 kB] Get:74 http://deb.debian.org/debian buster/main amd64 libxml2 amd64 2.9.4+dfsg1-7+deb10u4 [689 kB] Get:75 http://deb.debian.org/debian buster/main amd64 openmpi-bin amd64 3.1.3-11 [200 kB] Get:76 http://deb.debian.org/debian buster/main amd64 openmpi-common all 3.1.3-11 [165 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 45.0 MB in 0s (83.9 MB/s) Selecting previously unselected package libtinfo6:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5095 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.1+20181013-2+deb10u2_amd64.deb ... Unpacking libtinfo6:amd64 (6.1+20181013-2+deb10u2) ... Setting up libtinfo6:amd64 (6.1+20181013-2+deb10u2) ... (Reading database ... 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Installing new version of config file /etc/skel/.profile ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode Selecting previously unselected package libzstd1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5106 files and directories currently installed.) Preparing to unpack .../libzstd1_1.3.8+dfsg-3+deb10u2_amd64.deb ... Unpacking libzstd1:amd64 (1.3.8+dfsg-3+deb10u2) ... Setting up libzstd1:amd64 (1.3.8+dfsg-3+deb10u2) ... Selecting previously unselected package libgmp10:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5112 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.1.2+dfsg-4+deb10u1_amd64.deb ... Unpacking libgmp10:amd64 (2:6.1.2+dfsg-4+deb10u1) ... Setting up libgmp10:amd64 (2:6.1.2+dfsg-4+deb10u1) ... Selecting previously unselected package libnettle6:amd64. (Reading database ... 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(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5485 files and directories currently installed.) Preparing to unpack .../0-libhdf5-openmpi-103_1.10.4+repack-10_amd64.deb ... Unpacking libhdf5-openmpi-103:amd64 (1.10.4+repack-10) ... Preparing to unpack .../1-libblas3_3.8.0-2_amd64.deb ... Unpacking libblas3:amd64 (3.8.0-2) over (3.7.0-2) ... Preparing to unpack .../2-liblapack3_3.8.0-2_amd64.deb ... Unpacking liblapack3:amd64 (3.8.0-2) over (3.7.0-2) ... 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Unpacking libkeyutils1:amd64 (1.6-6) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../03-libkrb5support0_1.17-3+deb10u4_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-3+deb10u4) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../04-libk5crypto3_1.17-3+deb10u4_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-3+deb10u4) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../05-libssl1.1_1.1.1n-0+deb10u3_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1n-0+deb10u3) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../06-libkrb5-3_1.17-3+deb10u4_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-3+deb10u4) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../07-libgssapi-krb5-2_1.17-3+deb10u4_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... Selecting previously unselected package openssh-client. Preparing to unpack .../08-openssh-client_1%3a7.9p1-10+deb10u2_amd64.deb ... Unpacking openssh-client (1:7.9p1-10+deb10u2) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../09-libicu63_63.1-6+deb10u3_amd64.deb ... Unpacking libicu63:amd64 (63.1-6+deb10u3) ... Selecting previously unselected package libscalapack-openmpi2.0. Preparing to unpack .../10-libscalapack-openmpi2.0_2.0.2-7+b2_amd64.deb ... Unpacking libscalapack-openmpi2.0 (2.0.2-7+b2) ... Selecting previously unselected package libmumps-5.1.2:amd64. Preparing to unpack .../11-libmumps-5.1.2_5.1.2-4+b2_amd64.deb ... Unpacking libmumps-5.1.2:amd64 (5.1.2-4+b2) ... Selecting previously unselected package libscotch-6.0. Preparing to unpack .../12-libscotch-6.0_6.0.6-2_amd64.deb ... Unpacking libscotch-6.0 (6.0.6-2) ... Selecting previously unselected package libptscotch-6.0. Preparing to unpack .../13-libptscotch-6.0_6.0.6-2_amd64.deb ... Unpacking libptscotch-6.0 (6.0.6-2) ... Selecting previously unselected package libtrilinos-trilinosss12:amd64. Preparing to unpack .../14-libtrilinos-trilinosss12_12.12.1-7_amd64.deb ... Unpacking libtrilinos-trilinosss12:amd64 (12.12.1-7) ... Preparing to unpack .../15-libtrilinos-amesos12_12.12.1-7_amd64.deb ... Unpacking libtrilinos-amesos12:amd64 (12.12.1-7) over (12.10.1-3) ... Preparing to unpack .../16-libtrilinos-tpetra12_12.12.1-7_amd64.deb ... Unpacking libtrilinos-tpetra12:amd64 (12.12.1-7) over (12.10.1-3) ... Preparing to unpack .../17-libtrilinos-amesos2-12_12.12.1-7_amd64.deb ... Unpacking libtrilinos-amesos2-12:amd64 (12.12.1-7) over (12.10.1-3) ... Preparing to unpack .../18-libtrilinos-rtop12_12.12.1-7_amd64.deb ... Unpacking libtrilinos-rtop12:amd64 (12.12.1-7) over (12.10.1-3) ... Preparing to unpack .../19-libtrilinos-thyra12_12.12.1-7_amd64.deb ... Unpacking libtrilinos-thyra12:amd64 (12.12.1-7) over (12.10.1-3) ... Preparing to unpack .../20-libtrilinos-zoltan2-12_12.12.1-7_amd64.deb ... Unpacking libtrilinos-zoltan2-12:amd64 (12.12.1-7) over (12.10.1-3) ... Preparing to unpack .../21-libtrilinos-ifpack2-12_12.12.1-7_amd64.deb ... Unpacking libtrilinos-ifpack2-12:amd64 (12.12.1-7) over (12.10.1-3) ... Preparing to unpack .../22-libxml2_2.9.4+dfsg1-7+deb10u4_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+deb10u4) over (2.9.4+dfsg1-2.2+deb9u2) ... Preparing to unpack .../23-openmpi-bin_3.1.3-11_amd64.deb ... Unpacking openmpi-bin (3.1.3-11) over (2.0.2-2) ... Preparing to unpack .../24-openmpi-common_3.1.3-11_all.deb ... Unpacking openmpi-common (3.1.3-11) over (2.0.2-2) ... Setting up libkeyutils1:amd64 (1.6-6) ... Setting up apt (1.8.2.3) ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... Installing new version of config file /etc/cron.daily/apt-compat ... Setting up e2fslibs:amd64 (1.44.5-1+deb10u3) ... Setting up libssl1.1:amd64 (1.1.1n-0+deb10u3) ... Setting up libicu63:amd64 (63.1-6+deb10u3) ... Setting up libkrb5support0:amd64 (1.17-3+deb10u4) ... Setting up libquadmath0:amd64 (8.3.0-6) ... Setting up util-linux (2.33.1-0.1) ... update-alternatives: warning: alternative /usr/bin/pg (part of link group pager) doesn't exist; removing from list of alternatives Setting up libk5crypto3:amd64 (1.17-3+deb10u4) ... Setting up libevent-core-2.1-6:amd64 (2.1.8-stable-4) ... Setting up libgfortran5:amd64 (8.3.0-6) ... Setting up libevent-2.1-6:amd64 (2.1.8-stable-4) ... Setting up mount (2.33.1-0.1) ... Setting up libcomerr2:amd64 (1.44.5-1+deb10u3) ... Setting up libpsm2-2 (11.2.78-1) ... Setting up openmpi-common (3.1.3-11) ... Setting up libkrb5-3:amd64 (1.17-3+deb10u4) ... Setting up libtrilinos-trilinosss12:amd64 (12.12.1-7) ... Setting up libbsd0:amd64 (0.9.1-2+deb10u1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+deb10u4) ... Setting up libfabric1 (1.6.2-3) ... Setting up libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4) ... Setting up libpmix2:amd64 (3.1.2-3) ... Setting up libopenmpi3:amd64 (3.1.3-11) ... Setting up libedit2:amd64 (3.1-20181209-1) ... Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libhdf5-openmpi-103:amd64 (1.10.4+repack-10) ... Setting up libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... Setting up libscotch-6.0 (6.0.6-2) ... Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libscalapack-openmpi2.0 (2.0.2-7+b2) ... Setting up libtrilinos-teuchos12:amd64 (12.12.1-7) ... Setting up openssh-client (1:7.9p1-10+deb10u2) ... Setting up libptscotch-6.0 (6.0.6-2) ... Setting up libmumps-5.1.2:amd64 (5.1.2-4+b2) ... Setting up libtrilinos-epetra12:amd64 (12.12.1-7) ... Setting up openmpi-bin (3.1.3-11) ... Installing new version of config file /etc/openmpi/openmpi-mca-params.conf ... update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libtrilinos-zoltan2-12:amd64 (12.12.1-7) ... Setting up libtrilinos-rtop12:amd64 (12.12.1-7) ... Setting up libtrilinos-tpetra12:amd64 (12.12.1-7) ... Setting up libtrilinos-triutils12:amd64 (12.12.1-7) ... Setting up libtrilinos-amesos2-12:amd64 (12.12.1-7) ... Setting up libtrilinos-epetraext12:amd64 (12.12.1-7) ... Setting up libtrilinos-thyra12:amd64 (12.12.1-7) ... Setting up libtrilinos-amesos12:amd64 (12.12.1-7) ... Setting up libtrilinos-ifpack2-12:amd64 (12.12.1-7) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... 0m32.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-yf', 'dist-upgrade'] 0m32.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m33.5s DUMP: f6fc0f2636004ef589309651dfd778f4 - 0m33.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m33.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'show', '--no-all-versions', 'libtrilinos-ifpack2-12'] 0m33.8s DUMP: Package: libtrilinos-ifpack2-12 Source: trilinos Version: 12.12.1-7 Installed-Size: 5861 Maintainer: Debian Science Maintainers Architecture: amd64 Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libopenmpi3, libptscotch-6.0, libscotch-6.0, libstdc++6 (>= 5.2), libtrilinos-amesos2-12, libtrilinos-kokkos12, libtrilinos-teuchos12, libtrilinos-thyra12, libtrilinos-tpetra12, libtrilinos-zoltan2-12 Description-en: next generation algebraic preconditioners - runtime files Ifpack2 provides incomplete factorizations, relaxations, and domain decomposition operators for linear algebra objects (sparse matrices, operators, and dense vectors and multivectors) provided by the Tpetra package. You may use these operators however you wish: for example as preconditioners in an iterative solver, or as smoothers for algebraic multigrid. . This package contains the dynamic libraries. Description-md5: 0fec478c269aa8bcdf3a1c3288f8467a Multi-Arch: same Homepage: http://trilinos.org Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/t/trilinos/libtrilinos-ifpack2-12_12.12.1-7_amd64.deb Size: 1008552 MD5sum: 4ec238e457ae06d6eb4dd7f4ceafa88c SHA256: b37b9bbc23ddfa553f189a4e5a7690c52d3ddf12fa708130800d47c3a33436da 0m33.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'show', '--no-all-versions', 'libtrilinos-ifpack2-12'] 0m33.8s INFO: apt-cache knows about the following packages: libtrilinos-ifpack2-12 0m33.8s INFO: Running scripts pre_install 0m33.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_database-server'] 0m33.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_database-server'] 0m33.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_exceptions'] 0m33.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_exceptions'] 0m33.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_extras'] 0m33.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_extras'] 0m33.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture'] 0m33.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture'] 0m33.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m33.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m33.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy'] 0m33.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian buster/main amd64 Packages release v=10.13,o=Debian,a=oldstable,n=buster,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy'] 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy', 'libtrilinos-ifpack2-12'] 0m33.9s DUMP: libtrilinos-ifpack2-12: Installed: 12.12.1-7 Candidate: 12.12.1-7 Version table: *** 12.12.1-7 500 500 http://deb.debian.org/debian buster/main amd64 Packages 100 /var/lib/dpkg/status 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy', 'libtrilinos-ifpack2-12'] 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-y', 'install', 'libtrilinos-ifpack2-12'] 0m34.3s DUMP: Reading package lists... Building dependency tree... Reading state information... libtrilinos-ifpack2-12 is already the newest version (12.12.1-7). The following packages were automatically installed and are no longer required: libblacs-openmpi1 libblas-common libgfortran3 libicu57 libmumps-4.10.0 libmumps-5.1.2 libopenmpi2 libscalapack-openmpi1 libscalapack-openmpi2.0 libtrilinos-amesos12 mpi-default-bin Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-y', 'install', 'libtrilinos-ifpack2-12'] 0m34.3s INFO: Running scripts post_install 0m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_install_exceptions'] 0m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_install_exceptions'] 0m34.3s INFO: Running scripts post_distupgrade 0m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_exceptions'] 0m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_exceptions'] 0m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_zz_backports'] 0m34.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_distupgrade_zz_backports'] 0m34.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m34.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m34.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m34.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m34.9s INFO: Running scripts pre_install 0m34.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_database-server'] 0m34.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_database-server'] 0m34.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_exceptions'] 0m34.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_exceptions'] 0m34.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_extras'] 0m34.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_extras'] 0m34.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture'] 0m34.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture'] 0m34.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m34.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m34.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy'] 0m35.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian buster/main amd64 Packages release v=10.13,o=Debian,a=oldstable,n=buster,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy', 'libtrilinos-ifpack2-12'] 0m35.0s DUMP: libtrilinos-ifpack2-12: Installed: 12.12.1-7 Candidate: 12.12.1-7 Version table: *** 12.12.1-7 500 500 http://deb.debian.org/debian buster/main amd64 Packages 100 /var/lib/dpkg/status 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-cache', 'policy', 'libtrilinos-ifpack2-12'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-y', 'install', 'libtrilinos-ifpack2-12=12.12.1-7'] 0m35.5s DUMP: Reading package lists... Building dependency tree... Reading state information... libtrilinos-ifpack2-12 is already the newest version (12.12.1-7). The following packages were automatically installed and are no longer required: libblacs-openmpi1 libblas-common libgfortran3 libicu57 libmumps-4.10.0 libmumps-5.1.2 libopenmpi2 libscalapack-openmpi1 libscalapack-openmpi2.0 libtrilinos-amesos12 mpi-default-bin Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', '-y', 'install', 'libtrilinos-ifpack2-12=12.12.1-7'] 0m35.5s INFO: Running scripts post_install 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_install_exceptions'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_install_exceptions'] 0m35.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m35.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m36.0s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', '-ac', '--ignore-obsolete'] 0m37.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', '-ac', '--ignore-obsolete'] 0m37.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m37.2s DUMP: 0.15.6 0m37.2s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m37.2s INFO: Running adequate version 0.15.6 now. 0m37.2s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'libtrilinos-ifpack2-12'] 0m37.5s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'libtrilinos-ifpack2-12'] 0m37.5s INFO: Running scripts pre_remove 0m37.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m37.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m37.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m37.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m37.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m41.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m41.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m41.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m41.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m41.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m41.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_exceptions'] 0m41.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/pre_remove_exceptions'] 0m41.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m41.8s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 1.8.2.3 install ok installed base-files base-files 10.3+deb10u13 install ok installed base-passwd base-passwd 3.5.46 install ok installed bash bash 5.0-4 install ok installed bsdutils bsdutils 1:2.33.1-0.1 install ok installed coreutils coreutils 8.30-3 install ok installed dash dash 0.5.10.2-5 install ok installed debconf debconf 1.5.71+deb10u1 install ok installed debian-archive-keyring debian-archive-keyring 2019.1+deb10u1 install ok installed debianutils debianutils 4.8.6.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.8 install ok installed e2fslibs:amd64 e2fslibs 1.44.5-1+deb10u3 install ok installed e2fsprogs e2fsprogs 1.44.5-1+deb10u3 install ok installed fdisk fdisk 2.33.1-0.1 install ok installed findutils findutils 4.6.0+git+20190209-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gcc-8-base:amd64 gcc-8-base 8.3.0-6 install ok installed gpgv gpgv 2.2.12-1+deb10u2 install ok installed grep grep 3.3-1 install ok installed gzip gzip 1.9-3+deb10u1 install ok installed hostname hostname 3.21 install ok installed init-system-helpers init-system-helpers 1.56+nmu1 install ok installed libacl1:amd64 libacl1 2.2.53-4 install ok installed libaec0:amd64 libaec0 1.0.2-1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.8.2.3 install ok installed libattr1:amd64 libattr1 1:2.4.48-4 install ok installed libaudit-common libaudit-common 1:2.8.4-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.4-3 install ok installed libblacs-openmpi1 libblacs-openmpi1 1.1-38 install ok installed libblas-common libblas-common 3.7.0-2 install ok installed libblas3:amd64 libblas3 3.8.0-2 install ok installed libblkid1:amd64 libblkid1 2.33.1-0.1 install ok installed libbsd0:amd64 libbsd0 0.9.1-2+deb10u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-9.2~deb10u1 install ok installed libc-bin libc-bin 2.28-10+deb10u1 install ok installed libc6:amd64 libc6 2.28-10+deb10u1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2 install ok installed libcom-err2:amd64 libcom-err2 1.44.5-1+deb10u3 install ok installed libcomerr2:amd64 libcomerr2 1.44.5-1+deb10u3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.5 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.249 install ok installed libedit2:amd64 libedit2 3.1-20181209-1 install ok installed libevent-2.1-6:amd64 libevent-2.1-6 2.1.8-stable-4 install ok installed libevent-core-2.1-6:amd64 libevent-core-2.1-6 2.1.8-stable-4 install ok installed libevent-pthreads-2.1-6:amd64 libevent-pthreads-2.1-6 2.1.8-stable-4 install ok installed libext2fs2:amd64 libext2fs2 1.44.5-1+deb10u3 install ok installed libfabric1 libfabric1 1.6.2-3 install ok installed libfdisk1:amd64 libfdisk1 2.33.1-0.1 install ok installed libffi6:amd64 libffi6 3.2.1-9 install ok installed libgcc1:amd64 libgcc1 1:8.3.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.4-5+deb10u1 install ok installed libgfortran3:amd64 libgfortran3 6.3.0-18+deb9u1 install ok installed libgfortran5:amd64 libgfortran5 8.3.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-4+deb10u1 install ok installed libgnutls30:amd64 libgnutls30 3.6.7-4+deb10u8 install ok installed libgpg-error0:amd64 libgpg-error0 1.35-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.17-3+deb10u4 install ok installed libhdf5-openmpi-103:amd64 libhdf5-openmpi-103 1.10.4+repack-10 install ok installed libhogweed4:amd64 libhogweed4 3.4.1-1+deb10u1 install ok installed libhwloc-plugins:amd64 libhwloc-plugins 1.11.12-3 install ok installed libhwloc5:amd64 libhwloc5 1.11.12-3 install ok installed libibverbs1:amd64 libibverbs1 22.1-1 install ok installed libicu57:amd64 libicu57 57.1-6+deb9u4 install ok installed libicu63:amd64 libicu63 63.1-6+deb10u3 install ok installed libidn2-0:amd64 libidn2-0 2.0.5-1+deb10u1 install ok installed libk5crypto3:amd64 libk5crypto3 1.17-3+deb10u4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6-6 install ok installed libkrb5-3:amd64 libkrb5-3 1.17-3+deb10u4 install ok installed libkrb5support0:amd64 libkrb5support0 1.17-3+deb10u4 install ok installed liblapack3:amd64 liblapack3 3.8.0-2 install ok installed libltdl7:amd64 libltdl7 2.4.6-9 install ok installed liblz4-1:amd64 liblz4-1 1.8.3-1+deb10u1 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+deb10u1 install ok installed libmount1:amd64 libmount1 2.33.1-0.1 install ok installed libmumps-4.10.0 libmumps-4.10.0 4.10.0.dfsg-4+b2 install ok installed libmumps-5.1.2:amd64 libmumps-5.1.2 5.1.2-4+b2 install ok installed libncursesw5:amd64 libncursesw5 6.1+20181013-2+deb10u2 install ok installed libncursesw6:amd64 libncursesw6 6.1+20181013-2+deb10u2 install ok installed libnettle6:amd64 libnettle6 3.4.1-1+deb10u1 install ok installed libnl-3-200:amd64 libnl-3-200 3.4.0-1 install ok installed libnl-route-3-200:amd64 libnl-route-3-200 3.4.0-1 install ok installed libnuma1:amd64 libnuma1 2.0.12-1 install ok installed libopenmpi2:amd64 libopenmpi2 2.0.2-2 install ok installed libopenmpi3:amd64 libopenmpi3 3.1.3-11 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.15-2+deb10u1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpciaccess0:amd64 libpciaccess0 0.14-1 install ok installed libpcre3:amd64 libpcre3 2:8.39-12 install ok installed libpmix2:amd64 libpmix2 3.1.2-3 install ok installed libpsm-infinipath1 libpsm-infinipath1 3.3+20.604758e7-6 install ok installed libpsm2-2 libpsm2-2 11.2.78-1 install ok installed libptscotch-6.0 libptscotch-6.0 6.0.6-2 install ok installed libquadmath0:amd64 libquadmath0 8.3.0-6 install ok installed librdmacm1:amd64 librdmacm1 22.1-1 install ok installed libscalapack-openmpi1 libscalapack-openmpi1 1.8.0-13 install ok installed libscalapack-openmpi2.0 libscalapack-openmpi2.0 2.0.2-7+b2 install ok installed libscotch-6.0 libscotch-6.0 6.0.6-2 install ok installed libseccomp2:amd64 libseccomp2 2.3.3-4 install ok installed libselinux1:amd64 libselinux1 2.8-1+b1 install ok installed libsemanage-common libsemanage-common 2.8-2 install ok installed libsemanage1:amd64 libsemanage1 2.8-2 install ok installed libsepol1:amd64 libsepol1 2.8-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.33.1-0.1 install ok installed libss2:amd64 libss2 1.44.5-1+deb10u3 install ok installed libssl1.1:amd64 libssl1.1 1.1.1n-0+deb10u3 install ok installed libstdc++6:amd64 libstdc++6 8.3.0-6 install ok installed libsystemd0:amd64 libsystemd0 241-7~deb10u8 install ok installed libsz2:amd64 libsz2 1.0.2-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.13-3 install ok installed libtinfo5:amd64 libtinfo5 6.1+20181013-2+deb10u2 install ok installed libtinfo6:amd64 libtinfo6 6.1+20181013-2+deb10u2 install ok installed libtrilinos-amesos12:amd64 libtrilinos-amesos12 12.12.1-7 install ok installed libtrilinos-amesos2-12:amd64 libtrilinos-amesos2-12 12.12.1-7 install ok installed libtrilinos-epetra12:amd64 libtrilinos-epetra12 12.12.1-7 install ok installed libtrilinos-epetraext12:amd64 libtrilinos-epetraext12 12.12.1-7 install ok installed libtrilinos-ifpack2-12:amd64 libtrilinos-ifpack2-12 12.12.1-7 install ok installed libtrilinos-kokkos12:amd64 libtrilinos-kokkos12 12.12.1-7 install ok installed libtrilinos-rtop12:amd64 libtrilinos-rtop12 12.12.1-7 install ok installed libtrilinos-teuchos12:amd64 libtrilinos-teuchos12 12.12.1-7 install ok installed libtrilinos-thyra12:amd64 libtrilinos-thyra12 12.12.1-7 install ok installed libtrilinos-tpetra12:amd64 libtrilinos-tpetra12 12.12.1-7 install ok installed libtrilinos-trilinosss12:amd64 libtrilinos-trilinosss12 12.12.1-7 install ok installed libtrilinos-triutils12:amd64 libtrilinos-triutils12 12.12.1-7 install ok installed libtrilinos-zoltan2-12:amd64 libtrilinos-zoltan2-12 12.12.1-7 install ok installed libudev1:amd64 libudev1 241-7~deb10u8 install ok installed libunistring2:amd64 libunistring2 0.9.10-1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.33.1-0.1 install ok installed libxml2:amd64 libxml2 2.9.4+dfsg1-7+deb10u4 install ok installed libzstd1:amd64 libzstd1 1.3.8+dfsg-3+deb10u2 install ok installed login login 1:4.5-1.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.33.1-0.1 install ok installed mpi-default-bin mpi-default-bin 1.13 install ok installed multiarch-support multiarch-support 2.28-10+deb10u1 install ok installed ncurses-base ncurses-base 6.1+20181013-2+deb10u2 install ok installed ncurses-bin ncurses-bin 6.1+20181013-2+deb10u2 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.2.12-2 install ok installed openmpi-bin openmpi-bin 3.1.3-11 install ok installed openmpi-common openmpi-common 3.1.3-11 install ok installed openssh-client openssh-client 1:7.9p1-10+deb10u2 install ok installed passwd passwd 1:4.5-1.1 install ok installed perl-base perl-base 5.28.1-6+deb10u1 install ok installed sed sed 4.7-1 install ok installed sensible-utils sensible-utils 0.0.12 install ok installed sysvinit-utils sysvinit-utils 2.93-8 install ok installed tar tar 1.30+dfsg-6 install ok installed util-linux util-linux 2.33.1-0.1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-1+deb10u1 0m41.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m41.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', 'remove', 'libaec0:amd64', 'libblacs-openmpi1', 'libblas-common', 'libblas3:amd64', 'libbsd0:amd64', 'libedit2:amd64', 'libevent-2.1-6:amd64', 'libevent-core-2.1-6:amd64', 'libevent-pthreads-2.1-6:amd64', 'libfabric1', 'libgfortran3:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-openmpi-103:amd64', 'libhwloc-plugins:amd64', 'libhwloc5:amd64', 'libibverbs1:amd64', 'libicu57:amd64', 'libicu63:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libltdl7:amd64', 'libmumps-4.10.0', 'libmumps-5.1.2:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi2:amd64', 'libopenmpi3:amd64', 'libpciaccess0:amd64', 'libpmix2:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptscotch-6.0', 'libquadmath0:amd64', 'librdmacm1:amd64', 'libscalapack-openmpi1', 'libscalapack-openmpi2.0', 'libscotch-6.0', 'libssl1.1:amd64', 'libsz2:amd64', 'libtrilinos-amesos12:amd64', 'libtrilinos-amesos2-12:amd64', 'libtrilinos-epetra12:amd64', 'libtrilinos-epetraext12:amd64', 'libtrilinos-ifpack2-12:amd64', 'libtrilinos-kokkos12:amd64', 'libtrilinos-rtop12:amd64', 'libtrilinos-teuchos12:amd64', 'libtrilinos-thyra12:amd64', 'libtrilinos-tpetra12:amd64', 'libtrilinos-trilinosss12:amd64', 'libtrilinos-triutils12:amd64', 'libtrilinos-zoltan2-12:amd64', 'libxml2:amd64', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client'] 0m42.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libaec0 libblacs-openmpi1 libblas-common libblas3 libbsd0 libedit2 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libfabric1 libgfortran3 libgfortran5 libgssapi-krb5-2 libhdf5-openmpi-103 libhwloc-plugins libhwloc5 libibverbs1 libicu57 libicu63 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libltdl7 libmumps-4.10.0 libmumps-5.1.2 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi2 libopenmpi3 libpciaccess0 libpmix2 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libquadmath0 librdmacm1 libscalapack-openmpi1 libscalapack-openmpi2.0 libscotch-6.0 libssl1.1 libsz2 libtrilinos-amesos12 libtrilinos-amesos2-12 libtrilinos-epetra12 libtrilinos-epetraext12 libtrilinos-ifpack2-12 libtrilinos-kokkos12 libtrilinos-rtop12 libtrilinos-teuchos12 libtrilinos-thyra12 libtrilinos-tpetra12 libtrilinos-trilinosss12 libtrilinos-triutils12 libtrilinos-zoltan2-12 libxml2 mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client 0 upgraded, 0 newly installed, 63 to remove and 0 not upgraded. After this operation, 181 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5732 files and directories currently installed.) Removing libtrilinos-ifpack2-12:amd64 (12.12.1-7) ... Removing libtrilinos-thyra12:amd64 (12.12.1-7) ... Removing libtrilinos-amesos12:amd64 (12.12.1-7) ... Removing libtrilinos-epetraext12:amd64 (12.12.1-7) ... Removing libhdf5-openmpi-103:amd64 (1.10.4+repack-10) ... Removing libsz2:amd64 (1.0.2-1) ... Removing libaec0:amd64 (1.0.2-1) ... Removing libmumps-4.10.0 (4.10.0.dfsg-4+b2) ... Removing libscalapack-openmpi1 (1.8.0-13) ... Removing libblacs-openmpi1 (1.1-38) ... Removing libblas-common (3.7.0-2) ... Removing libtrilinos-amesos2-12:amd64 (12.12.1-7) ... Removing libtrilinos-tpetra12:amd64 (12.12.1-7) ... Removing libtrilinos-zoltan2-12:amd64 (12.12.1-7) ... Removing libtrilinos-triutils12:amd64 (12.12.1-7) ... Removing libtrilinos-epetra12:amd64 (12.12.1-7) ... Removing libmumps-5.1.2:amd64 (5.1.2-4+b2) ... Removing libscalapack-openmpi2.0 (2.0.2-7+b2) ... Removing mpi-default-bin (1.13) ... Removing openmpi-bin (3.1.3-11) ... Removing openssh-client (1:7.9p1-10+deb10u2) ... Removing libedit2:amd64 (3.1-20181209-1) ... Removing libbsd0:amd64 (0.9.1-2+deb10u1) ... Removing libtrilinos-rtop12:amd64 (12.12.1-7) ... Removing libopenmpi2:amd64 (2.0.2-2) ... Removing libgfortran3:amd64 (6.3.0-18+deb9u1) ... Removing libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... Removing libicu57:amd64 (57.1-6+deb9u4) ... Removing libkrb5-3:amd64 (1.17-3+deb10u4) ... Removing libk5crypto3:amd64 (1.17-3+deb10u4) ... Removing libkrb5support0:amd64 (1.17-3+deb10u4) ... Removing libkeyutils1:amd64 (1.6-6) ... Removing libptscotch-6.0 (6.0.6-2) ... Removing libscotch-6.0 (6.0.6-2) ... Removing libssl1.1:amd64 (1.1.1n-0+deb10u3) ... Removing libtrilinos-trilinosss12:amd64 (12.12.1-7) ... Removing openmpi-common (3.1.3-11) ... Removing libtrilinos-teuchos12:amd64 (12.12.1-7) ... Removing libopenmpi3:amd64 (3.1.3-11) ... Removing libpmix2:amd64 (3.1.2-3) ... Removing libevent-2.1-6:amd64 (2.1.8-stable-4) ... Removing libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4) ... Removing libevent-core-2.1-6:amd64 (2.1.8-stable-4) ... Removing libfabric1 (1.6.2-3) ... Removing liblapack3:amd64 (3.8.0-2) ... Removing libhwloc-plugins:amd64 (1.11.12-3) ... Removing libhwloc5:amd64 (1.11.12-3) ... Removing librdmacm1:amd64 (22.1-1) ... Removing libibverbs1:amd64 (22.1-1) ... Removing libxml2:amd64 (2.9.4+dfsg1-7+deb10u4) ... Removing libicu63:amd64 (63.1-6+deb10u3) ... Removing libltdl7:amd64 (2.4.6-9) ... Removing libnl-route-3-200:amd64 (3.4.0-1) ... Removing libnl-3-200:amd64 (3.4.0-1) ... Removing libpsm2-2 (11.2.78-1) ... Removing libnuma1:amd64 (2.0.12-1) ... Removing libpciaccess0:amd64 (0.14-1) ... Removing libpsm-infinipath1 (3.3+20.604758e7-6) ... update-alternatives: warning: alternative /usr/lib/libpsm1/libpsm_infinipath.so.1.16 (part of link group libpsm_infinipath.so.1) doesn't exist; removing from list of alternatives update-alternatives: warning: /etc/alternatives/libpsm_infinipath.so.1 is dangling; it will be updated with best choice Removing libtrilinos-kokkos12:amd64 (12.12.1-7) ... Removing ocl-icd-libopencl1:amd64 (2.2.12-2) ... Removing libblas3:amd64 (3.8.0-2) ... Removing libgfortran5:amd64 (8.3.0-6) ... Removing libquadmath0:amd64 (8.3.0-6) ... Processing triggers for libc-bin (2.28-10+deb10u1) ... 0m42.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', 'remove', 'libaec0:amd64', 'libblacs-openmpi1', 'libblas-common', 'libblas3:amd64', 'libbsd0:amd64', 'libedit2:amd64', 'libevent-2.1-6:amd64', 'libevent-core-2.1-6:amd64', 'libevent-pthreads-2.1-6:amd64', 'libfabric1', 'libgfortran3:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-openmpi-103:amd64', 'libhwloc-plugins:amd64', 'libhwloc5:amd64', 'libibverbs1:amd64', 'libicu57:amd64', 'libicu63:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libltdl7:amd64', 'libmumps-4.10.0', 'libmumps-5.1.2:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi2:amd64', 'libopenmpi3:amd64', 'libpciaccess0:amd64', 'libpmix2:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptscotch-6.0', 'libquadmath0:amd64', 'librdmacm1:amd64', 'libscalapack-openmpi1', 'libscalapack-openmpi2.0', 'libscotch-6.0', 'libssl1.1:amd64', 'libsz2:amd64', 'libtrilinos-amesos12:amd64', 'libtrilinos-amesos2-12:amd64', 'libtrilinos-epetra12:amd64', 'libtrilinos-epetraext12:amd64', 'libtrilinos-ifpack2-12:amd64', 'libtrilinos-kokkos12:amd64', 'libtrilinos-rtop12:amd64', 'libtrilinos-teuchos12:amd64', 'libtrilinos-thyra12:amd64', 'libtrilinos-tpetra12:amd64', 'libtrilinos-trilinosss12:amd64', 'libtrilinos-triutils12:amd64', 'libtrilinos-zoltan2-12:amd64', 'libxml2:amd64', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client'] 0m42.8s INFO: Running scripts post_remove 0m42.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_remove_exceptions'] 0m42.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_remove_exceptions'] 0m42.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg', '--purge', 'libaec0:amd64', 'libblacs-openmpi1', 'libblas-common', 'libblas3:amd64', 'libbsd0:amd64', 'libedit2:amd64', 'libevent-2.1-6:amd64', 'libevent-core-2.1-6:amd64', 'libevent-pthreads-2.1-6:amd64', 'libfabric1', 'libgfortran3:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-openmpi-103:amd64', 'libhwloc-plugins:amd64', 'libhwloc5:amd64', 'libibverbs1:amd64', 'libicu57:amd64', 'libicu63:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libltdl7:amd64', 'libmumps-4.10.0', 'libmumps-5.1.2:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi2:amd64', 'libopenmpi3:amd64', 'libpciaccess0:amd64', 'libpmix2:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptscotch-6.0', 'libquadmath0:amd64', 'librdmacm1:amd64', 'libscalapack-openmpi1', 'libscalapack-openmpi2.0', 'libscotch-6.0', 'libssl1.1:amd64', 'libsz2:amd64', 'libtrilinos-amesos12:amd64', 'libtrilinos-amesos2-12:amd64', 'libtrilinos-epetra12:amd64', 'libtrilinos-epetraext12:amd64', 'libtrilinos-ifpack2-12:amd64', 'libtrilinos-kokkos12:amd64', 'libtrilinos-rtop12:amd64', 'libtrilinos-teuchos12:amd64', 'libtrilinos-thyra12:amd64', 'libtrilinos-tpetra12:amd64', 'libtrilinos-trilinosss12:amd64', 'libtrilinos-triutils12:amd64', 'libtrilinos-zoltan2-12:amd64', 'libxml2:amd64', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client'] 0m43.1s DUMP: dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libblacs-openmpi1 which isn't installed dpkg: warning: ignoring request to remove libblas-common which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libevent-2.1-6 which isn't installed dpkg: warning: ignoring request to remove libevent-core-2.1-6 which isn't installed dpkg: warning: ignoring request to remove libevent-pthreads-2.1-6 which isn't installed dpkg: warning: ignoring request to remove libfabric1 which isn't installed dpkg: warning: ignoring request to remove libgfortran3 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed (Reading database ... 4633 files and directories currently installed.) Purging configuration files for libgssapi-krb5-2:amd64 (1.17-3+deb10u4) ... dpkg: warning: ignoring request to remove libhdf5-openmpi-103 which isn't installed dpkg: warning: ignoring request to remove libhwloc-plugins which isn't installed dpkg: warning: ignoring request to remove libhwloc5 which isn't installed dpkg: warning: ignoring request to remove libibverbs1 which isn't installed dpkg: warning: ignoring request to remove libicu57 which isn't installed dpkg: warning: ignoring request to remove libicu63 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libltdl7 which isn't installed dpkg: warning: ignoring request to remove libmumps-4.10.0 which isn't installed dpkg: warning: ignoring request to remove libmumps-5.1.2 which isn't installed Purging configuration files for libnl-3-200:amd64 (3.4.0-1) ... dpkg: warning: ignoring request to remove libnl-route-3-200 which isn't installed dpkg: warning: ignoring request to remove libnuma1 which isn't installed dpkg: warning: ignoring request to remove libopenmpi2 which isn't installed dpkg: warning: ignoring request to remove libopenmpi3 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libpmix2 which isn't installed Purging configuration files for libpsm-infinipath1 (3.3+20.604758e7-6) ... dpkg: warning: ignoring request to remove libpsm2-2 which isn't installed dpkg: warning: ignoring request to remove libptscotch-6.0 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove librdmacm1 which isn't installed dpkg: warning: ignoring request to remove libscalapack-openmpi1 which isn't installed dpkg: warning: ignoring request to remove libscalapack-openmpi2.0 which isn't installed dpkg: warning: ignoring request to remove libscotch-6.0 which isn't installed Purging configuration files for libssl1.1:amd64 (1.1.1n-0+deb10u3) ... dpkg: warning: ignoring request to remove libsz2 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-amesos12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-amesos2-12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-epetra12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-epetraext12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-ifpack2-12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-kokkos12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-rtop12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-teuchos12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-thyra12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-tpetra12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-trilinosss12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-triutils12 which isn't installed dpkg: warning: ignoring request to remove libtrilinos-zoltan2-12 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove mpi-default-bin which isn't installed dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which isn't installed Purging configuration files for openmpi-bin (3.1.3-11) ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed Purging configuration files for openssh-client (1:7.9p1-10+deb10u2) ... 0m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg', '--purge', 'libaec0:amd64', 'libblacs-openmpi1', 'libblas-common', 'libblas3:amd64', 'libbsd0:amd64', 'libedit2:amd64', 'libevent-2.1-6:amd64', 'libevent-core-2.1-6:amd64', 'libevent-pthreads-2.1-6:amd64', 'libfabric1', 'libgfortran3:amd64', 'libgfortran5:amd64', 'libgssapi-krb5-2:amd64', 'libhdf5-openmpi-103:amd64', 'libhwloc-plugins:amd64', 'libhwloc5:amd64', 'libibverbs1:amd64', 'libicu57:amd64', 'libicu63:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libltdl7:amd64', 'libmumps-4.10.0', 'libmumps-5.1.2:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi2:amd64', 'libopenmpi3:amd64', 'libpciaccess0:amd64', 'libpmix2:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptscotch-6.0', 'libquadmath0:amd64', 'librdmacm1:amd64', 'libscalapack-openmpi1', 'libscalapack-openmpi2.0', 'libscotch-6.0', 'libssl1.1:amd64', 'libsz2:amd64', 'libtrilinos-amesos12:amd64', 'libtrilinos-amesos2-12:amd64', 'libtrilinos-epetra12:amd64', 'libtrilinos-epetraext12:amd64', 'libtrilinos-ifpack2-12:amd64', 'libtrilinos-kokkos12:amd64', 'libtrilinos-rtop12:amd64', 'libtrilinos-teuchos12:amd64', 'libtrilinos-thyra12:amd64', 'libtrilinos-tpetra12:amd64', 'libtrilinos-trilinosss12:amd64', 'libtrilinos-triutils12:amd64', 'libtrilinos-zoltan2-12:amd64', 'libxml2:amd64', 'mpi-default-bin', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client'] 0m43.1s INFO: Running scripts post_purge 0m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_purge_exceptions'] 0m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_purge_exceptions'] 0m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg', '--purge', '--pending'] 0m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg', '--purge', '--pending'] 0m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg', '--remove', '--pending'] 0m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg', '--remove', '--pending'] 0m43.1s INFO: Running scripts post_test 0m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_test_exceptions'] 0m43.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'tmp/scripts/post_test_exceptions'] 0m43.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m43.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m43.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg-divert', '--list'] 0m43.5s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m43.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'dpkg-divert', '--list'] 0m43.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', 'clean'] 0m43.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do', 'apt-get', 'clean'] 0m43.6s DEBUG: Recording chroot state 0m44.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/shm'] 0m44.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/shm'] 0m44.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/console'] 0m44.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/console'] 0m44.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/ptmx'] 0m44.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/ptmx'] 0m44.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/pts'] 0m44.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/dev/pts'] 0m44.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/proc'] 0m44.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do/proc'] 0m44.4s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m44.5s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpkj9ix7do'] 0m44.5s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpkj9ix7do 0m44.5s INFO: PASS: Upgrading between Debian distributions. 0m44.5s INFO: PASS: All tests. 0m44.5s INFO: piuparts run ends. ret=0 End: 2023-02-08 09:19:54 GMT