Start: 2023-02-23 07:36:33 GMT [stretch] Package: libgetfem++-dev Source: getfem++ Version: 5.1+dfsg1-4 Installed-Size: 26958 Maintainer: Debian Science Team Architecture: amd64 Depends: libboost-dev, libgetfem5++ (= 5.1+dfsg1-4), libgmm++-dev, libmuparser-dev, libsuperlu-dev Description: Development files for the GETFEM++ generic finite element library Homepage: http://home.gna.org/getfem/ Description-md5: 515f85fa7060885c8ef1cdcbe94a2bf1 Tag: devel::library, role::devel-lib Section: libdevel Priority: extra Filename: pool/main/g/getfem++/libgetfem++-dev_5.1+dfsg1-4_amd64.deb Size: 3315544 MD5sum: cf8a747b0e82031962c5316a9384c80f SHA256: 51fa0a26dddd0dd4f0616cc2f8cfaecf31accff55aeed0946cdd4cd8b927dbc0 [stretch-lts] Package: libgetfem++-dev Source: getfem++ Version: 5.1+dfsg1-4 Installed-Size: 26958 Maintainer: Debian Science Team Architecture: amd64 Depends: libboost-dev, libgetfem5++ (= 5.1+dfsg1-4), libgmm++-dev, libmuparser-dev, libsuperlu-dev Description: Development files for the GETFEM++ generic finite element library Homepage: http://home.gna.org/getfem/ Description-md5: 515f85fa7060885c8ef1cdcbe94a2bf1 Tag: devel::library, role::devel-lib Section: libdevel Priority: extra Filename: pool/main/g/getfem++/libgetfem++-dev_5.1+dfsg1-4_amd64.deb Size: 3315544 MD5sum: cf8a747b0e82031962c5316a9384c80f SHA256: 51fa0a26dddd0dd4f0616cc2f8cfaecf31accff55aeed0946cdd4cd8b927dbc0 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d stretch-lts -B /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat --apt libgetfem++-dev=5.1+dfsg1-4 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d stretch-lts -B /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat --apt libgetfem++-dev=5.1+dfsg1-4 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp6io_x610 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp6io_x610 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6io_x610', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.9s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6io_x610', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6io_x610/proc'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6io_x610/proc'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/pts'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/pts'] 0m1.9s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/ptmx'] 0m2.0s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/ptmx'] 0m2.0s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/console'] 0m2.0s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/console'] 0m2.0s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/shm'] 0m2.0s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/shm'] 0m2.0s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main 0m2.1s DEBUG: Created policy-rc.d and chmodded it. 0m2.1s DEBUG: Created resolv.conf. 0m2.1s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp6io_x610/tmp/scripts/ 0m2.1s INFO: Running scripts post_chroot_unpack 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', 'update'] 0m3.5s DUMP: Ign:1 http://deb.debian.org/debian stretch InRelease Hit:2 http://deb.debian.org/debian stretch Release Reading package lists... 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', 'update'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-yf', 'dist-upgrade'] 0m3.7s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-yf', 'dist-upgrade'] 0m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.2s DUMP: 660e5103244a20b75ca08c3f8741e16e - 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.2s INFO: Running scripts post_setup 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_dummy_users'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_dummy_users'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_forbid_home'] 0m4.8s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_forbid_home'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.8s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' '/bin/sync' -> 'true' 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_minimize'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_minimize'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_zz_backports'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_setup_zz_backports'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.8s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.10 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u1 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.25 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u1 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u1 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+b1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.10 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+b1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+b1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u12 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u12 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed login login 1:4.4-4.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed passwd passwd 1:4.4-4.1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.8s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat 0m4.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m5.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m5.1s INFO: Running scripts is_testable 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/is_testable_uninstallable'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/is_testable_uninstallable'] 0m5.1s INFO: Running scripts pre_test 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_test_exceptions'] 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_test_exceptions'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_test_root_password'] 0m5.1s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_test_root_password'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'show', '--no-all-versions', 'libgetfem++-dev'] 0m5.3s DUMP: Package: libgetfem++-dev Source: getfem++ Version: 5.1+dfsg1-4 Installed-Size: 26958 Maintainer: Debian Science Team Architecture: amd64 Depends: libboost-dev, libgetfem5++ (= 5.1+dfsg1-4), libgmm++-dev, libmuparser-dev, libsuperlu-dev Description-en: Development files for the GETFEM++ generic finite element library GETFEM++ is a library allowing the computation of any elementary matrix (even for mixed finite element methods) on the largest class of methods and elements, and for arbitrary dimension. . This package contains development files for building software that uses the GETFEM++ library. Description-md5: 515f85fa7060885c8ef1cdcbe94a2bf1 Homepage: http://home.gna.org/getfem/ Tag: devel::library, role::devel-lib Section: libdevel Priority: extra Filename: pool/main/g/getfem++/libgetfem++-dev_5.1+dfsg1-4_amd64.deb Size: 3315544 MD5sum: cf8a747b0e82031962c5316a9384c80f SHA256: 51fa0a26dddd0dd4f0616cc2f8cfaecf31accff55aeed0946cdd4cd8b927dbc0 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'show', '--no-all-versions', 'libgetfem++-dev'] 0m5.3s INFO: apt-cache knows about the following packages: libgetfem++-dev 0m5.3s INFO: Running scripts pre_install 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_database-server'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_database-server'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_exceptions'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_exceptions'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_extras'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_extras'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy'] 0m5.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy', 'libgetfem++-dev'] 0m5.4s DUMP: libgetfem++-dev: Installed: (none) Candidate: 5.1+dfsg1-4 Version table: 5.1+dfsg1-4 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy', 'libgetfem++-dev'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-y', 'install', 'libgetfem++-dev'] 0m16.4s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: binutils cpp cpp-6 gcc gcc-6 gfortran gfortran-6 libasan3 libatomic1 libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libboost-dev libboost-system1.62.0 libboost1.62-dev libc-dev-bin libc6-dev libcc1-0 libcilkrts5 libfabric1 libgcc-6-dev libgetfem5++ libgfortran-6-dev libgfortran3 libgmm++-dev libgmp10 libgomp1 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 libisl15 libitm1 liblapack3 liblsan0 libltdl-dev libltdl7 libmpc3 libmpfr4 libmpx2 libmumps-4.10.0 libmumps-dev libmumps-seq-4.10.0 libmuparser-dev libmuparser2v5 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpsm-infinipath1 libqhull7 libquadmath0 librdmacm1 libscalapack-mpi-dev libscalapack-openmpi1 libstdc++-6-dev libsuperlu-dev libsuperlu5 libtsan0 libubsan0 libxml2 linux-libc-dev mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common Suggested packages: binutils-doc cpp-doc gcc-6-locales gcc-multilib make manpages-dev autoconf automake libtool flex bison gdb gcc-doc gcc-6-multilib gcc-6-doc libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan3-dbg liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx2-dbg libquadmath0-dbg gfortran-multilib gfortran-doc gfortran-6-multilib gfortran-6-doc libgfortran3-dbg libcoarrays-dev liblapack-doc-man liblapack-doc libboost-doc libboost1.62-doc libboost-atomic1.62-dev libboost-chrono1.62-dev libboost-context1.62-dev libboost-coroutine1.62-dev libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev libboost-filesystem1.62-dev libboost-graph1.62-dev libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev libboost-mpi1.62-dev libboost-mpi-python1.62-dev libboost-program-options1.62-dev libboost-python1.62-dev libboost-random1.62-dev libboost-regex1.62-dev libboost-serialization1.62-dev libboost-signals1.62-dev libboost-system1.62-dev libboost-test1.62-dev libboost-thread1.62-dev libboost-timer1.62-dev libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev libmpfrc++-dev libntl-dev glibc-doc libhwloc-contrib-plugins libtool-doc openmpi-doc pciutils scalapack-doc libstdc++-6-doc libsuperlu-doc opencl-icd Recommended packages: manpages manpages-dev libtool xml-core The following NEW packages will be installed: binutils cpp cpp-6 gcc gcc-6 gfortran gfortran-6 libasan3 libatomic1 libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libboost-dev libboost-system1.62.0 libboost1.62-dev libc-dev-bin libc6-dev libcc1-0 libcilkrts5 libfabric1 libgcc-6-dev libgetfem++-dev libgetfem5++ libgfortran-6-dev libgfortran3 libgmm++-dev libgmp10 libgomp1 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 libisl15 libitm1 liblapack3 liblsan0 libltdl-dev libltdl7 libmpc3 libmpfr4 libmpx2 libmumps-4.10.0 libmumps-dev libmumps-seq-4.10.0 libmuparser-dev libmuparser2v5 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpsm-infinipath1 libqhull7 libquadmath0 librdmacm1 libscalapack-mpi-dev libscalapack-openmpi1 libstdc++-6-dev libsuperlu-dev libsuperlu5 libtsan0 libubsan0 libxml2 linux-libc-dev mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded. Need to get 72.0 MB of archives. After this operation, 410 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian stretch/main amd64 libicu57 amd64 57.1-6+deb9u4 [7699 kB] Get:2 http://deb.debian.org/debian stretch/main amd64 libxml2 amd64 2.9.4+dfsg1-2.2+deb9u2 [920 kB] Get:3 http://deb.debian.org/debian stretch/main amd64 binutils amd64 2.28-5 [3770 kB] Get:4 http://deb.debian.org/debian stretch/main amd64 libgmp10 amd64 2:6.1.2+dfsg-1 [253 kB] Get:5 http://deb.debian.org/debian stretch/main amd64 libisl15 amd64 0.18-1 [564 kB] Get:6 http://deb.debian.org/debian stretch/main amd64 libmpfr4 amd64 3.1.5-1 [556 kB] Get:7 http://deb.debian.org/debian stretch/main amd64 libmpc3 amd64 1.0.3-1+b2 [39.9 kB] Get:8 http://deb.debian.org/debian stretch/main amd64 cpp-6 amd64 6.3.0-18+deb9u1 [6584 kB] Get:9 http://deb.debian.org/debian stretch/main amd64 cpp amd64 4:6.3.0-4 [18.7 kB] Get:10 http://deb.debian.org/debian stretch/main amd64 libcc1-0 amd64 6.3.0-18+deb9u1 [30.6 kB] Get:11 http://deb.debian.org/debian stretch/main amd64 libgomp1 amd64 6.3.0-18+deb9u1 [73.3 kB] Get:12 http://deb.debian.org/debian stretch/main amd64 libitm1 amd64 6.3.0-18+deb9u1 [27.3 kB] Get:13 http://deb.debian.org/debian stretch/main amd64 libatomic1 amd64 6.3.0-18+deb9u1 [8966 B] Get:14 http://deb.debian.org/debian stretch/main amd64 libasan3 amd64 6.3.0-18+deb9u1 [311 kB] Get:15 http://deb.debian.org/debian stretch/main amd64 liblsan0 amd64 6.3.0-18+deb9u1 [115 kB] Get:16 http://deb.debian.org/debian stretch/main amd64 libtsan0 amd64 6.3.0-18+deb9u1 [257 kB] Get:17 http://deb.debian.org/debian stretch/main amd64 libubsan0 amd64 6.3.0-18+deb9u1 [107 kB] Get:18 http://deb.debian.org/debian stretch/main amd64 libcilkrts5 amd64 6.3.0-18+deb9u1 [40.5 kB] Get:19 http://deb.debian.org/debian stretch/main amd64 libmpx2 amd64 6.3.0-18+deb9u1 [11.2 kB] Get:20 http://deb.debian.org/debian stretch/main amd64 libquadmath0 amd64 6.3.0-18+deb9u1 [131 kB] Get:21 http://deb.debian.org/debian stretch/main amd64 libgcc-6-dev amd64 6.3.0-18+deb9u1 [2296 kB] Get:22 http://deb.debian.org/debian stretch/main amd64 gcc-6 amd64 6.3.0-18+deb9u1 [6900 kB] Get:23 http://deb.debian.org/debian stretch/main amd64 gcc amd64 4:6.3.0-4 [5196 B] Get:24 http://deb.debian.org/debian stretch/main amd64 libgfortran3 amd64 6.3.0-18+deb9u1 [265 kB] Get:25 http://deb.debian.org/debian stretch/main amd64 libgfortran-6-dev amd64 6.3.0-18+deb9u1 [299 kB] Get:26 http://deb.debian.org/debian stretch/main amd64 libc-dev-bin amd64 2.24-11+deb9u4 [259 kB] Get:27 http://deb.debian.org/debian stretch/main amd64 linux-libc-dev amd64 4.9.228-1 [1511 kB] Get:28 http://deb.debian.org/debian stretch/main amd64 libc6-dev amd64 2.24-11+deb9u4 [2364 kB] Get:29 http://deb.debian.org/debian stretch/main amd64 gfortran-6 amd64 6.3.0-18+deb9u1 [6916 kB] Get:30 http://deb.debian.org/debian stretch/main amd64 gfortran amd64 4:6.3.0-4 [1356 B] Get:31 http://deb.debian.org/debian stretch/main amd64 libblas-common amd64 3.7.0-2 [14.2 kB] Get:32 http://deb.debian.org/debian stretch/main amd64 libblas3 amd64 3.7.0-2 [155 kB] Get:33 http://deb.debian.org/debian stretch/main amd64 libblas-dev amd64 3.7.0-2 [162 kB] Get:34 http://deb.debian.org/debian stretch/main amd64 libstdc++-6-dev amd64 6.3.0-18+deb9u1 [1420 kB] Get:35 http://deb.debian.org/debian stretch/main amd64 libboost1.62-dev amd64 1.62.0+dfsg-4 [7053 kB] Get:36 http://deb.debian.org/debian stretch/main amd64 libboost-dev amd64 1.62.0.1 [3632 B] Get:37 http://deb.debian.org/debian stretch/main amd64 libboost-system1.62.0 amd64 1.62.0+dfsg-4 [32.4 kB] Get:38 http://deb.debian.org/debian stretch/main amd64 libnl-3-200 amd64 3.2.27-2 [61.5 kB] Get:39 http://deb.debian.org/debian stretch/main amd64 libnl-route-3-200 amd64 3.2.27-2 [136 kB] Get:40 http://deb.debian.org/debian stretch/main amd64 libibverbs1 amd64 1.2.1-2 [39.3 kB] Get:41 http://deb.debian.org/debian stretch/main amd64 libpsm-infinipath1 amd64 3.3+19.g67c0807.open-3 [169 kB] Get:42 http://deb.debian.org/debian stretch/main amd64 librdmacm1 amd64 1.1.0-2 [49.4 kB] Get:43 http://deb.debian.org/debian stretch/main amd64 libfabric1 amd64 1.4.0-1 [259 kB] Get:44 http://deb.debian.org/debian stretch/main amd64 liblapack3 amd64 3.7.0-2 [2141 kB] Get:45 http://deb.debian.org/debian stretch/main amd64 libltdl7 amd64 2.4.6-2 [389 kB] Get:46 http://deb.debian.org/debian stretch/main amd64 libltdl-dev amd64 2.4.6-2 [161 kB] Get:47 http://deb.debian.org/debian stretch/main amd64 libmuparser2v5 amd64 2.2.3-6 [113 kB] Get:48 http://deb.debian.org/debian stretch/main amd64 libnuma1 amd64 2.0.11-2.1 [33.3 kB] Get:49 http://deb.debian.org/debian stretch/main amd64 libpciaccess0 amd64 0.13.4-1+b2 [50.0 kB] Get:50 http://deb.debian.org/debian stretch/main amd64 libqhull7 amd64 2015.2-2 [194 kB] Get:51 http://deb.debian.org/debian stretch/main amd64 libsuperlu5 amd64 5.2.1+dfsg1-2 [160 kB] Get:52 http://deb.debian.org/debian stretch/main amd64 libsuperlu-dev amd64 5.2.1+dfsg1-2 [18.0 kB] Get:53 http://deb.debian.org/debian stretch/main amd64 libhwloc5 amd64 1.11.5-1 [105 kB] Get:54 http://deb.debian.org/debian stretch/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1 [36.8 kB] Get:55 http://deb.debian.org/debian stretch/main amd64 libhwloc-plugins amd64 1.11.5-1 [16.1 kB] Get:56 http://deb.debian.org/debian stretch/main amd64 libopenmpi2 amd64 2.0.2-2 [2008 kB] Get:57 http://deb.debian.org/debian stretch/main amd64 openmpi-common all 2.0.2-2 [149 kB] Get:58 http://deb.debian.org/debian stretch/main amd64 openmpi-bin amd64 2.0.2-2 [186 kB] Get:59 http://deb.debian.org/debian stretch/main amd64 mpi-default-bin amd64 1.8 [4050 B] Get:60 http://deb.debian.org/debian stretch/main amd64 libblacs-openmpi1 amd64 1.1-38 [55.8 kB] Get:61 http://deb.debian.org/debian stretch/main amd64 libibverbs-dev amd64 1.2.1-2 [107 kB] Get:62 http://deb.debian.org/debian stretch/main amd64 libnuma-dev amd64 2.0.11-2.1 [46.0 kB] Get:63 http://deb.debian.org/debian stretch/main amd64 libhwloc-dev amd64 1.11.5-1 [167 kB] Get:64 http://deb.debian.org/debian stretch/main amd64 libopenmpi-dev amd64 2.0.2-2 [1013 kB] Get:65 http://deb.debian.org/debian stretch/main amd64 mpi-default-dev amd64 1.8 [4846 B] Get:66 http://deb.debian.org/debian stretch/main amd64 libblacs-mpi-dev amd64 1.1-38 [50.7 kB] Get:67 http://deb.debian.org/debian stretch/main amd64 libmumps-seq-4.10.0 amd64 4.10.0.dfsg-4+b2 [924 kB] Get:68 http://deb.debian.org/debian stretch/main amd64 libgetfem5++ amd64 5.1+dfsg1-4 [2367 kB] Get:69 http://deb.debian.org/debian stretch/main amd64 libscalapack-openmpi1 amd64 1.8.0-13 [2209 kB] Get:70 http://deb.debian.org/debian stretch/main amd64 libmumps-4.10.0 amd64 4.10.0.dfsg-4+b2 [916 kB] Get:71 http://deb.debian.org/debian stretch/main amd64 libscalapack-mpi-dev amd64 1.8.0-13 [2143 kB] Get:72 http://deb.debian.org/debian stretch/main amd64 libmumps-dev amd64 4.10.0.dfsg-4+b2 [834 kB] Get:73 http://deb.debian.org/debian stretch/main amd64 libgmm++-dev all 5.1+dfsg1-4 [124 kB] Get:74 http://deb.debian.org/debian stretch/main amd64 libmuparser-dev amd64 2.2.3-6 [29.0 kB] Get:75 http://deb.debian.org/debian stretch/main amd64 libgetfem++-dev amd64 5.1+dfsg1-4 [3316 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 72.0 MB in 0s (95.2 MB/s) Selecting previously unselected package libicu57:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4411 files and directories currently installed.) Preparing to unpack .../00-libicu57_57.1-6+deb9u4_amd64.deb ... Unpacking libicu57:amd64 (57.1-6+deb9u4) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../01-libxml2_2.9.4+dfsg1-2.2+deb9u2_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u2) ... Selecting previously unselected package binutils. Preparing to unpack .../02-binutils_2.28-5_amd64.deb ... Unpacking binutils (2.28-5) ... Selecting previously unselected package libgmp10:amd64. Preparing to unpack .../03-libgmp10_2%3a6.1.2+dfsg-1_amd64.deb ... Unpacking libgmp10:amd64 (2:6.1.2+dfsg-1) ... Selecting previously unselected package libisl15:amd64. Preparing to unpack .../04-libisl15_0.18-1_amd64.deb ... Unpacking libisl15:amd64 (0.18-1) ... Selecting previously unselected package libmpfr4:amd64. Preparing to unpack .../05-libmpfr4_3.1.5-1_amd64.deb ... Unpacking libmpfr4:amd64 (3.1.5-1) ... Selecting previously unselected package libmpc3:amd64. Preparing to unpack .../06-libmpc3_1.0.3-1+b2_amd64.deb ... Unpacking libmpc3:amd64 (1.0.3-1+b2) ... Selecting previously unselected package cpp-6. Preparing to unpack .../07-cpp-6_6.3.0-18+deb9u1_amd64.deb ... Unpacking cpp-6 (6.3.0-18+deb9u1) ... Selecting previously unselected package cpp. Preparing to unpack .../08-cpp_4%3a6.3.0-4_amd64.deb ... Unpacking cpp (4:6.3.0-4) ... Selecting previously unselected package libcc1-0:amd64. Preparing to unpack .../09-libcc1-0_6.3.0-18+deb9u1_amd64.deb ... Unpacking libcc1-0:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../10-libgomp1_6.3.0-18+deb9u1_amd64.deb ... Unpacking libgomp1:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libitm1:amd64. Preparing to unpack .../11-libitm1_6.3.0-18+deb9u1_amd64.deb ... Unpacking libitm1:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libatomic1:amd64. Preparing to unpack .../12-libatomic1_6.3.0-18+deb9u1_amd64.deb ... Unpacking libatomic1:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libasan3:amd64. Preparing to unpack .../13-libasan3_6.3.0-18+deb9u1_amd64.deb ... Unpacking libasan3:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package liblsan0:amd64. Preparing to unpack .../14-liblsan0_6.3.0-18+deb9u1_amd64.deb ... Unpacking liblsan0:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libtsan0:amd64. Preparing to unpack .../15-libtsan0_6.3.0-18+deb9u1_amd64.deb ... Unpacking libtsan0:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libubsan0:amd64. Preparing to unpack .../16-libubsan0_6.3.0-18+deb9u1_amd64.deb ... Unpacking libubsan0:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libcilkrts5:amd64. Preparing to unpack .../17-libcilkrts5_6.3.0-18+deb9u1_amd64.deb ... Unpacking libcilkrts5:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libmpx2:amd64. Preparing to unpack .../18-libmpx2_6.3.0-18+deb9u1_amd64.deb ... Unpacking libmpx2:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libquadmath0:amd64. Preparing to unpack .../19-libquadmath0_6.3.0-18+deb9u1_amd64.deb ... Unpacking libquadmath0:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libgcc-6-dev:amd64. Preparing to unpack .../20-libgcc-6-dev_6.3.0-18+deb9u1_amd64.deb ... Unpacking libgcc-6-dev:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package gcc-6. Preparing to unpack .../21-gcc-6_6.3.0-18+deb9u1_amd64.deb ... Unpacking gcc-6 (6.3.0-18+deb9u1) ... Selecting previously unselected package gcc. Preparing to unpack .../22-gcc_4%3a6.3.0-4_amd64.deb ... Unpacking gcc (4:6.3.0-4) ... Selecting previously unselected package libgfortran3:amd64. Preparing to unpack .../23-libgfortran3_6.3.0-18+deb9u1_amd64.deb ... Unpacking libgfortran3:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libgfortran-6-dev:amd64. Preparing to unpack .../24-libgfortran-6-dev_6.3.0-18+deb9u1_amd64.deb ... Unpacking libgfortran-6-dev:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libc-dev-bin. Preparing to unpack .../25-libc-dev-bin_2.24-11+deb9u4_amd64.deb ... Unpacking libc-dev-bin (2.24-11+deb9u4) ... Selecting previously unselected package linux-libc-dev:amd64. Preparing to unpack .../26-linux-libc-dev_4.9.228-1_amd64.deb ... Unpacking linux-libc-dev:amd64 (4.9.228-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../27-libc6-dev_2.24-11+deb9u4_amd64.deb ... Unpacking libc6-dev:amd64 (2.24-11+deb9u4) ... Selecting previously unselected package gfortran-6. Preparing to unpack .../28-gfortran-6_6.3.0-18+deb9u1_amd64.deb ... Unpacking gfortran-6 (6.3.0-18+deb9u1) ... Selecting previously unselected package gfortran. Preparing to unpack .../29-gfortran_4%3a6.3.0-4_amd64.deb ... Unpacking gfortran (4:6.3.0-4) ... Selecting previously unselected package libblas-common. Preparing to unpack .../30-libblas-common_3.7.0-2_amd64.deb ... Unpacking libblas-common (3.7.0-2) ... Selecting previously unselected package libblas3. Preparing to unpack .../31-libblas3_3.7.0-2_amd64.deb ... Unpacking libblas3 (3.7.0-2) ... Selecting previously unselected package libblas-dev. Preparing to unpack .../32-libblas-dev_3.7.0-2_amd64.deb ... Unpacking libblas-dev (3.7.0-2) ... Selecting previously unselected package libstdc++-6-dev:amd64. Preparing to unpack .../33-libstdc++-6-dev_6.3.0-18+deb9u1_amd64.deb ... Unpacking libstdc++-6-dev:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libboost1.62-dev:amd64. Preparing to unpack .../34-libboost1.62-dev_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost1.62-dev:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libboost-dev:amd64. Preparing to unpack .../35-libboost-dev_1.62.0.1_amd64.deb ... Unpacking libboost-dev:amd64 (1.62.0.1) ... Selecting previously unselected package libboost-system1.62.0:amd64. Preparing to unpack .../36-libboost-system1.62.0_1.62.0+dfsg-4_amd64.deb ... Unpacking libboost-system1.62.0:amd64 (1.62.0+dfsg-4) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../37-libnl-3-200_3.2.27-2_amd64.deb ... Unpacking libnl-3-200:amd64 (3.2.27-2) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../38-libnl-route-3-200_3.2.27-2_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.2.27-2) ... Selecting previously unselected package libibverbs1. Preparing to unpack .../39-libibverbs1_1.2.1-2_amd64.deb ... Unpacking libibverbs1 (1.2.1-2) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../40-libpsm-infinipath1_3.3+19.g67c0807.open-3_amd64.deb ... Unpacking libpsm-infinipath1 (3.3+19.g67c0807.open-3) ... Selecting previously unselected package librdmacm1. Preparing to unpack .../41-librdmacm1_1.1.0-2_amd64.deb ... Unpacking librdmacm1 (1.1.0-2) ... Selecting previously unselected package libfabric1. Preparing to unpack .../42-libfabric1_1.4.0-1_amd64.deb ... Unpacking libfabric1 (1.4.0-1) ... Selecting previously unselected package liblapack3. Preparing to unpack .../43-liblapack3_3.7.0-2_amd64.deb ... Unpacking liblapack3 (3.7.0-2) ... Selecting previously unselected package libltdl7:amd64. Preparing to unpack .../44-libltdl7_2.4.6-2_amd64.deb ... Unpacking libltdl7:amd64 (2.4.6-2) ... Selecting previously unselected package libltdl-dev:amd64. Preparing to unpack .../45-libltdl-dev_2.4.6-2_amd64.deb ... Unpacking libltdl-dev:amd64 (2.4.6-2) ... Selecting previously unselected package libmuparser2v5:amd64. Preparing to unpack .../46-libmuparser2v5_2.2.3-6_amd64.deb ... Unpacking libmuparser2v5:amd64 (2.2.3-6) ... Selecting previously unselected package libnuma1:amd64. Preparing to unpack .../47-libnuma1_2.0.11-2.1_amd64.deb ... Unpacking libnuma1:amd64 (2.0.11-2.1) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../48-libpciaccess0_0.13.4-1+b2_amd64.deb ... Unpacking libpciaccess0:amd64 (0.13.4-1+b2) ... Selecting previously unselected package libqhull7:amd64. Preparing to unpack .../49-libqhull7_2015.2-2_amd64.deb ... Unpacking libqhull7:amd64 (2015.2-2) ... Selecting previously unselected package libsuperlu5:amd64. Preparing to unpack .../50-libsuperlu5_5.2.1+dfsg1-2_amd64.deb ... Unpacking libsuperlu5:amd64 (5.2.1+dfsg1-2) ... Selecting previously unselected package libsuperlu-dev:amd64. Preparing to unpack .../51-libsuperlu-dev_5.2.1+dfsg1-2_amd64.deb ... Unpacking libsuperlu-dev:amd64 (5.2.1+dfsg1-2) ... Selecting previously unselected package libhwloc5:amd64. Preparing to unpack .../52-libhwloc5_1.11.5-1_amd64.deb ... Unpacking libhwloc5:amd64 (1.11.5-1) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../53-ocl-icd-libopencl1_2.2.11-1_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1) ... Selecting previously unselected package libhwloc-plugins. Preparing to unpack .../54-libhwloc-plugins_1.11.5-1_amd64.deb ... Unpacking libhwloc-plugins (1.11.5-1) ... Selecting previously unselected package libopenmpi2:amd64. Preparing to unpack .../55-libopenmpi2_2.0.2-2_amd64.deb ... Unpacking libopenmpi2:amd64 (2.0.2-2) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../56-openmpi-common_2.0.2-2_all.deb ... Unpacking openmpi-common (2.0.2-2) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../57-openmpi-bin_2.0.2-2_amd64.deb ... Unpacking openmpi-bin (2.0.2-2) ... Selecting previously unselected package mpi-default-bin. Preparing to unpack .../58-mpi-default-bin_1.8_amd64.deb ... Unpacking mpi-default-bin (1.8) ... Selecting previously unselected package libblacs-openmpi1. Preparing to unpack .../59-libblacs-openmpi1_1.1-38_amd64.deb ... Unpacking libblacs-openmpi1 (1.1-38) ... Selecting previously unselected package libibverbs-dev. Preparing to unpack .../60-libibverbs-dev_1.2.1-2_amd64.deb ... Unpacking libibverbs-dev (1.2.1-2) ... Selecting previously unselected package libnuma-dev:amd64. Preparing to unpack .../61-libnuma-dev_2.0.11-2.1_amd64.deb ... Unpacking libnuma-dev:amd64 (2.0.11-2.1) ... Selecting previously unselected package libhwloc-dev:amd64. Preparing to unpack .../62-libhwloc-dev_1.11.5-1_amd64.deb ... Unpacking libhwloc-dev:amd64 (1.11.5-1) ... Selecting previously unselected package libopenmpi-dev. Preparing to unpack .../63-libopenmpi-dev_2.0.2-2_amd64.deb ... Unpacking libopenmpi-dev (2.0.2-2) ... Selecting previously unselected package mpi-default-dev. Preparing to unpack .../64-mpi-default-dev_1.8_amd64.deb ... Unpacking mpi-default-dev (1.8) ... Selecting previously unselected package libblacs-mpi-dev. Preparing to unpack .../65-libblacs-mpi-dev_1.1-38_amd64.deb ... Unpacking libblacs-mpi-dev (1.1-38) ... Selecting previously unselected package libmumps-seq-4.10.0. Preparing to unpack .../66-libmumps-seq-4.10.0_4.10.0.dfsg-4+b2_amd64.deb ... Unpacking libmumps-seq-4.10.0 (4.10.0.dfsg-4+b2) ... Selecting previously unselected package libgetfem5++:amd64. Preparing to unpack .../67-libgetfem5++_5.1+dfsg1-4_amd64.deb ... Unpacking libgetfem5++:amd64 (5.1+dfsg1-4) ... Selecting previously unselected package libscalapack-openmpi1. Preparing to unpack .../68-libscalapack-openmpi1_1.8.0-13_amd64.deb ... Unpacking libscalapack-openmpi1 (1.8.0-13) ... Selecting previously unselected package libmumps-4.10.0. Preparing to unpack .../69-libmumps-4.10.0_4.10.0.dfsg-4+b2_amd64.deb ... Unpacking libmumps-4.10.0 (4.10.0.dfsg-4+b2) ... Selecting previously unselected package libscalapack-mpi-dev. Preparing to unpack .../70-libscalapack-mpi-dev_1.8.0-13_amd64.deb ... Unpacking libscalapack-mpi-dev (1.8.0-13) ... Selecting previously unselected package libmumps-dev. Preparing to unpack .../71-libmumps-dev_4.10.0.dfsg-4+b2_amd64.deb ... Unpacking libmumps-dev (4.10.0.dfsg-4+b2) ... Selecting previously unselected package libgmm++-dev. Preparing to unpack .../72-libgmm++-dev_5.1+dfsg1-4_all.deb ... Unpacking libgmm++-dev (5.1+dfsg1-4) ... Selecting previously unselected package libmuparser-dev. Preparing to unpack .../73-libmuparser-dev_2.2.3-6_amd64.deb ... Unpacking libmuparser-dev (2.2.3-6) ... Selecting previously unselected package libgetfem++-dev. Preparing to unpack .../74-libgetfem++-dev_5.1+dfsg1-4_amd64.deb ... Unpacking libgetfem++-dev (5.1+dfsg1-4) ... Setting up libquadmath0:amd64 (6.3.0-18+deb9u1) ... Setting up libgomp1:amd64 (6.3.0-18+deb9u1) ... Setting up libatomic1:amd64 (6.3.0-18+deb9u1) ... Setting up libcc1-0:amd64 (6.3.0-18+deb9u1) ... Setting up libasan3:amd64 (6.3.0-18+deb9u1) ... Setting up libqhull7:amd64 (2015.2-2) ... Setting up libcilkrts5:amd64 (6.3.0-18+deb9u1) ... Setting up libblas-common (3.7.0-2) ... Setting up libnuma1:amd64 (2.0.11-2.1) ... Setting up libubsan0:amd64 (6.3.0-18+deb9u1) ... Setting up libtsan0:amd64 (6.3.0-18+deb9u1) ... Setting up libgfortran3:amd64 (6.3.0-18+deb9u1) ... Setting up linux-libc-dev:amd64 (4.9.228-1) ... Setting up libicu57:amd64 (57.1-6+deb9u4) ... Setting up libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u2) ... Setting up liblsan0:amd64 (6.3.0-18+deb9u1) ... Setting up libpsm-infinipath1 (3.3+19.g67c0807.open-3) ... Setting up libmpx2:amd64 (6.3.0-18+deb9u1) ... Setting up libgmp10:amd64 (2:6.1.2+dfsg-1) ... Setting up libblas3 (3.7.0-2) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up openmpi-common (2.0.2-2) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... Setting up libltdl7:amd64 (2.4.6-2) ... Setting up libmpfr4:amd64 (3.1.5-1) ... Setting up libpciaccess0:amd64 (0.13.4-1+b2) ... Setting up libmpc3:amd64 (1.0.3-1+b2) ... Setting up binutils (2.28-5) ... Setting up libc-dev-bin (2.24-11+deb9u4) ... Setting up ocl-icd-libopencl1:amd64 (2.2.11-1) ... Setting up libnl-3-200:amd64 (3.2.27-2) ... Setting up libc6-dev:amd64 (2.24-11+deb9u4) ... Setting up libmuparser2v5:amd64 (2.2.3-6) ... Setting up libitm1:amd64 (6.3.0-18+deb9u1) ... Setting up libboost-system1.62.0:amd64 (1.62.0+dfsg-4) ... Setting up libmumps-seq-4.10.0 (4.10.0.dfsg-4+b2) ... Setting up libgcc-6-dev:amd64 (6.3.0-18+deb9u1) ... Setting up libstdc++-6-dev:amd64 (6.3.0-18+deb9u1) ... Setting up libltdl-dev:amd64 (2.4.6-2) ... Setting up libboost1.62-dev:amd64 (1.62.0+dfsg-4) ... Setting up liblapack3 (3.7.0-2) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libgfortran-6-dev:amd64 (6.3.0-18+deb9u1) ... Setting up libnl-route-3-200:amd64 (3.2.27-2) ... Setting up libsuperlu5:amd64 (5.2.1+dfsg1-2) ... Setting up libhwloc5:amd64 (1.11.5-1) ... Setting up libmuparser-dev (2.2.3-6) ... Setting up libgetfem5++:amd64 (5.1+dfsg1-4) ... Setting up libhwloc-plugins (1.11.5-1) ... Setting up libisl15:amd64 (0.18-1) ... Setting up cpp-6 (6.3.0-18+deb9u1) ... Setting up libboost-dev:amd64 (1.62.0.1) ... Setting up libnuma-dev:amd64 (2.0.11-2.1) ... Setting up libibverbs1 (1.2.1-2) ... Setting up cpp (4:6.3.0-4) ... Setting up libhwloc-dev:amd64 (1.11.5-1) ... Setting up librdmacm1 (1.1.0-2) ... Setting up gcc-6 (6.3.0-18+deb9u1) ... Setting up libibverbs-dev (1.2.1-2) ... Setting up gfortran-6 (6.3.0-18+deb9u1) ... Setting up libfabric1 (1.4.0-1) ... Setting up gcc (4:6.3.0-4) ... Setting up libopenmpi2:amd64 (2.0.2-2) ... Setting up gfortran (4:6.3.0-4) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libblas-dev (3.7.0-2) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libopenmpi-dev (2.0.2-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up openmpi-bin (2.0.2-2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode Setting up mpi-default-dev (1.8) ... Setting up libsuperlu-dev:amd64 (5.2.1+dfsg1-2) ... Setting up mpi-default-bin (1.8) ... Setting up libblacs-openmpi1 (1.1-38) ... Setting up libblacs-mpi-dev (1.1-38) ... Setting up libscalapack-openmpi1 (1.8.0-13) ... Setting up libscalapack-mpi-dev (1.8.0-13) ... Setting up libmumps-4.10.0 (4.10.0.dfsg-4+b2) ... Setting up libmumps-dev (4.10.0.dfsg-4+b2) ... Setting up libgmm++-dev (5.1+dfsg1-4) ... Setting up libgetfem++-dev (5.1+dfsg1-4) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m16.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-y', 'install', 'libgetfem++-dev'] 0m16.4s INFO: Running scripts post_install 0m16.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_install_exceptions'] 0m16.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_install_exceptions'] 0m16.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m17.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m17.4s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp6io_x610 to stretch-lts 0m17.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main deb http://security.debian.org stretch/updates main 0m17.4s INFO: Running scripts pre_distupgrade 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_exceptions'] 0m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_exceptions'] 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', 'update'] 0m18.7s DUMP: Ign:1 http://deb.debian.org/debian stretch InRelease Get:2 http://security.debian.org stretch/updates InRelease [59.1 kB] Hit:3 http://deb.debian.org/debian stretch Release Get:5 http://security.debian.org stretch/updates/main amd64 Packages [782 kB] Get:6 http://security.debian.org stretch/updates/main Translation-en [368 kB] Fetched 1209 kB in 0s (2267 kB/s) Reading package lists... 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', 'update'] 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-yf', 'dist-upgrade'] 0m22.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt debian-archive-keyring dpkg e2fslibs e2fsprogs gzip libapt-pkg5.0 libcomerr2 libgcrypt20 libgmp10 libicu57 liblz4-1 liblzma5 libss2 libsystemd0 libudev1 libxml2 linux-libc-dev login passwd tar zlib1g 22 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 20.1 MB of archives. After this operation, 280 kB of additional disk space will be used. Get:1 http://security.debian.org stretch/updates/main amd64 tar amd64 1.29b-1.1+deb9u1 [760 kB] Get:2 http://security.debian.org stretch/updates/main amd64 dpkg amd64 1.18.26 [2117 kB] Get:3 http://security.debian.org stretch/updates/main amd64 e2fslibs amd64 1.43.4-2+deb9u2 [208 kB] Get:4 http://security.debian.org stretch/updates/main amd64 e2fsprogs amd64 1.43.4-2+deb9u2 [948 kB] Get:5 http://security.debian.org stretch/updates/main amd64 gzip amd64 1.6-5+deb9u1 [114 kB] Get:6 http://security.debian.org stretch/updates/main amd64 login amd64 1:4.4-4.1+deb9u1 [790 kB] Get:7 http://security.debian.org stretch/updates/main amd64 debian-archive-keyring all 2017.5+deb9u2 [92.4 kB] Get:8 http://security.debian.org stretch/updates/main amd64 liblz4-1 amd64 0.0~r131-2+deb9u1 [33.2 kB] Get:9 http://security.debian.org stretch/updates/main amd64 liblzma5 amd64 5.2.2-1.2+deb9u1 [234 kB] Get:10 http://security.debian.org stretch/updates/main amd64 zlib1g amd64 1:1.2.8.dfsg-5+deb9u1 [87.8 kB] Get:11 http://security.debian.org stretch/updates/main amd64 libapt-pkg5.0 amd64 1.4.11 [917 kB] Get:12 http://security.debian.org stretch/updates/main amd64 apt amd64 1.4.11 [1232 kB] Get:13 http://security.debian.org stretch/updates/main amd64 libsystemd0 amd64 232-25+deb9u14 [282 kB] Get:14 http://security.debian.org stretch/updates/main amd64 libcomerr2 amd64 1.43.4-2+deb9u2 [63.8 kB] Get:15 http://security.debian.org stretch/updates/main amd64 libss2 amd64 1.43.4-2+deb9u2 [68.0 kB] Get:16 http://security.debian.org stretch/updates/main amd64 passwd amd64 1:4.4-4.1+deb9u1 [997 kB] Get:17 http://security.debian.org stretch/updates/main amd64 libudev1 amd64 232-25+deb9u14 [126 kB] Get:18 http://security.debian.org stretch/updates/main amd64 libgcrypt20 amd64 1.7.6-2+deb9u4 [523 kB] Get:19 http://security.debian.org stretch/updates/main amd64 libicu57 amd64 57.1-6+deb9u5 [7700 kB] Get:20 http://security.debian.org stretch/updates/main amd64 libxml2 amd64 2.9.4+dfsg1-2.2+deb9u7 [920 kB] Get:21 http://security.debian.org stretch/updates/main amd64 libgmp10 amd64 2:6.1.2+dfsg-1+deb9u1 [253 kB] Get:22 http://security.debian.org stretch/updates/main amd64 linux-libc-dev amd64 4.9.320-2 [1633 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 20.1 MB in 0s (97.5 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../tar_1.29b-1.1+deb9u1_amd64.deb ... Unpacking tar (1.29b-1.1+deb9u1) over (1.29b-1.1) ... Setting up tar (1.29b-1.1+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../dpkg_1.18.26_amd64.deb ... Unpacking dpkg (1.18.26) over (1.18.25) ... Setting up dpkg (1.18.26) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../e2fslibs_1.43.4-2+deb9u2_amd64.deb ... Unpacking e2fslibs:amd64 (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up e2fslibs:amd64 (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.43.4-2+deb9u2_amd64.deb ... Unpacking e2fsprogs (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up e2fsprogs (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../gzip_1.6-5+deb9u1_amd64.deb ... Unpacking gzip (1.6-5+deb9u1) over (1.6-5+b1) ... Setting up gzip (1.6-5+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22361 files and directories currently installed.) Preparing to unpack .../login_1%3a4.4-4.1+deb9u1_amd64.deb ... Unpacking login (1:4.4-4.1+deb9u1) over (1:4.4-4.1) ... Setting up login (1:4.4-4.1+deb9u1) ... Installing new version of config file /etc/securetty ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22361 files and directories currently installed.) Preparing to unpack .../debian-archive-keyring_2017.5+deb9u2_all.deb ... Unpacking debian-archive-keyring (2017.5+deb9u2) over (2017.5+deb9u1) ... Setting up debian-archive-keyring (2017.5+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22364 files and directories currently installed.) Preparing to unpack .../liblz4-1_0.0~r131-2+deb9u1_amd64.deb ... Unpacking liblz4-1:amd64 (0.0~r131-2+deb9u1) over (0.0~r131-2+b1) ... Setting up liblz4-1:amd64 (0.0~r131-2+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22363 files and directories currently installed.) Preparing to unpack .../liblzma5_5.2.2-1.2+deb9u1_amd64.deb ... Unpacking liblzma5:amd64 (5.2.2-1.2+deb9u1) over (5.2.2-1.2+b1) ... Setting up liblzma5:amd64 (5.2.2-1.2+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.2.8.dfsg-5+deb9u1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.8.dfsg-5+deb9u1) over (1:1.2.8.dfsg-5) ... Setting up zlib1g:amd64 (1:1.2.8.dfsg-5+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../libapt-pkg5.0_1.4.11_amd64.deb ... Unpacking libapt-pkg5.0:amd64 (1.4.11) over (1.4.10) ... Setting up libapt-pkg5.0:amd64 (1.4.11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../archives/apt_1.4.11_amd64.deb ... Unpacking apt (1.4.11) over (1.4.10) ... Setting up apt (1.4.11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../libsystemd0_232-25+deb9u14_amd64.deb ... Unpacking libsystemd0:amd64 (232-25+deb9u14) over (232-25+deb9u12) ... Setting up libsystemd0:amd64 (232-25+deb9u14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../libcomerr2_1.43.4-2+deb9u2_amd64.deb ... Unpacking libcomerr2:amd64 (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up libcomerr2:amd64 (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../libss2_1.43.4-2+deb9u2_amd64.deb ... Unpacking libss2:amd64 (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up libss2:amd64 (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.4-4.1+deb9u1_amd64.deb ... Unpacking passwd (1:4.4-4.1+deb9u1) over (1:4.4-4.1) ... Setting up passwd (1:4.4-4.1+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../libudev1_232-25+deb9u14_amd64.deb ... Unpacking libudev1:amd64 (232-25+deb9u14) over (232-25+deb9u12) ... Setting up libudev1:amd64 (232-25+deb9u14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.7.6-2+deb9u4_amd64.deb ... Unpacking libgcrypt20:amd64 (1.7.6-2+deb9u4) over (1.7.6-2+deb9u3) ... Setting up libgcrypt20:amd64 (1.7.6-2+deb9u4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22362 files and directories currently installed.) Preparing to unpack .../libicu57_57.1-6+deb9u5_amd64.deb ... Unpacking libicu57:amd64 (57.1-6+deb9u5) over (57.1-6+deb9u4) ... Preparing to unpack .../libxml2_2.9.4+dfsg1-2.2+deb9u7_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u7) over (2.9.4+dfsg1-2.2+deb9u2) ... Preparing to unpack .../libgmp10_2%3a6.1.2+dfsg-1+deb9u1_amd64.deb ... Unpacking libgmp10:amd64 (2:6.1.2+dfsg-1+deb9u1) over (2:6.1.2+dfsg-1) ... Preparing to unpack .../linux-libc-dev_4.9.320-2_amd64.deb ... Unpacking linux-libc-dev:amd64 (4.9.320-2) over (4.9.228-1) ... Setting up linux-libc-dev:amd64 (4.9.320-2) ... Setting up libicu57:amd64 (57.1-6+deb9u5) ... Setting up libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u7) ... Setting up libgmp10:amd64 (2:6.1.2+dfsg-1+deb9u1) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m22.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-yf', 'dist-upgrade'] 0m22.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m23.2s DUMP: f0660a0a38f941b755664f52e8306b99 - 0m23.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m23.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'show', '--no-all-versions', 'libgetfem++-dev'] 0m23.3s DUMP: Package: libgetfem++-dev Source: getfem++ Version: 5.1+dfsg1-4 Installed-Size: 26958 Maintainer: Debian Science Team Architecture: amd64 Depends: libboost-dev, libgetfem5++ (= 5.1+dfsg1-4), libgmm++-dev, libmuparser-dev, libsuperlu-dev Description-en: Development files for the GETFEM++ generic finite element library GETFEM++ is a library allowing the computation of any elementary matrix (even for mixed finite element methods) on the largest class of methods and elements, and for arbitrary dimension. . This package contains development files for building software that uses the GETFEM++ library. Description-md5: 515f85fa7060885c8ef1cdcbe94a2bf1 Homepage: http://home.gna.org/getfem/ Tag: devel::library, role::devel-lib Section: libdevel Priority: extra Filename: pool/main/g/getfem++/libgetfem++-dev_5.1+dfsg1-4_amd64.deb Size: 3315544 MD5sum: cf8a747b0e82031962c5316a9384c80f SHA256: 51fa0a26dddd0dd4f0616cc2f8cfaecf31accff55aeed0946cdd4cd8b927dbc0 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'show', '--no-all-versions', 'libgetfem++-dev'] 0m23.3s INFO: apt-cache knows about the following packages: libgetfem++-dev 0m23.3s INFO: Running scripts pre_install 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_database-server'] 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_database-server'] 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_exceptions'] 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_exceptions'] 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_extras'] 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_extras'] 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture'] 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture'] 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy'] 0m23.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org stretch/updates/main amd64 Packages release v=9,o=Debian,a=oldoldstable,n=stretch,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m23.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy'] 0m23.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy', 'libgetfem++-dev'] 0m23.4s DUMP: libgetfem++-dev: Installed: 5.1+dfsg1-4 Candidate: 5.1+dfsg1-4 Version table: *** 5.1+dfsg1-4 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 100 /var/lib/dpkg/status 0m23.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy', 'libgetfem++-dev'] 0m23.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-y', 'install', 'libgetfem++-dev'] 0m23.6s DUMP: Reading package lists... Building dependency tree... Reading state information... libgetfem++-dev is already the newest version (5.1+dfsg1-4). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m23.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-y', 'install', 'libgetfem++-dev'] 0m23.6s INFO: Running scripts post_install 0m23.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_install_exceptions'] 0m23.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_install_exceptions'] 0m23.6s INFO: Running scripts post_distupgrade 0m23.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m23.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m23.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_exceptions'] 0m23.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_exceptions'] 0m23.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m23.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m23.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m23.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m23.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_zz_backports'] 0m23.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_distupgrade_zz_backports'] 0m23.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m24.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m24.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m25.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m25.5s INFO: Running scripts pre_install 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_database-server'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_database-server'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_exceptions'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_exceptions'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_extras'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_extras'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy'] 0m25.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org stretch/updates/main amd64 Packages release v=9,o=Debian,a=oldoldstable,n=stretch,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy', 'libgetfem++-dev'] 0m25.6s DUMP: libgetfem++-dev: Installed: 5.1+dfsg1-4 Candidate: 5.1+dfsg1-4 Version table: *** 5.1+dfsg1-4 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 100 /var/lib/dpkg/status 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-cache', 'policy', 'libgetfem++-dev'] 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-y', 'install', 'libgetfem++-dev=5.1+dfsg1-4'] 0m25.8s DUMP: Reading package lists... Building dependency tree... Reading state information... libgetfem++-dev is already the newest version (5.1+dfsg1-4). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', '-y', 'install', 'libgetfem++-dev=5.1+dfsg1-4'] 0m25.8s INFO: Running scripts post_install 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_install_exceptions'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_install_exceptions'] 0m25.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m26.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m28.5s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp6io_x610', '-ac', '--ignore-obsolete'] 0m30.5s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp6io_x610', '-ac', '--ignore-obsolete'] 0m30.5s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m30.5s DUMP: 0.15.6 0m30.5s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m30.5s INFO: Running adequate version 0.15.6 now. 0m30.5s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'libgetfem++-dev'] 0m30.6s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'libgetfem++-dev'] 0m30.6s INFO: Running scripts pre_remove 0m30.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m33.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m33.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m33.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m33.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_exceptions'] 0m33.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/pre_remove_exceptions'] 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m33.6s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.11 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed binutils binutils 2.28-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed cpp cpp 4:6.3.0-4 install ok installed cpp-6 cpp-6 6.3.0-18+deb9u1 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u2 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.26 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u2 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u2 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc gcc 4:6.3.0-4 install ok installed gcc-6 gcc-6 6.3.0-18+deb9u1 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gfortran gfortran 4:6.3.0-4 install ok installed gfortran-6 gfortran-6 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+deb9u1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.11 install ok installed libasan3:amd64 libasan3 6.3.0-18+deb9u1 install ok installed libatomic1:amd64 libatomic1 6.3.0-18+deb9u1 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblacs-mpi-dev libblacs-mpi-dev 1.1-38 install ok installed libblacs-openmpi1 libblacs-openmpi1 1.1-38 install ok installed libblas-common libblas-common 3.7.0-2 install ok installed libblas-dev libblas-dev 3.7.0-2 install ok installed libblas3 libblas3 3.7.0-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libboost-dev:amd64 libboost-dev 1.62.0.1 install ok installed libboost-system1.62.0:amd64 libboost-system1.62.0 1.62.0+dfsg-4 install ok installed libboost1.62-dev:amd64 libboost1.62-dev 1.62.0+dfsg-4 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc-dev-bin libc-dev-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libc6-dev:amd64 libc6-dev 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcc1-0:amd64 libcc1-0 6.3.0-18+deb9u1 install ok installed libcilkrts5:amd64 libcilkrts5 6.3.0-18+deb9u1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfabric1 libfabric1 1.4.0-1 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc-6-dev:amd64 libgcc-6-dev 6.3.0-18+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u4 install ok installed libgetfem++-dev libgetfem++-dev 5.1+dfsg1-4 install ok installed libgetfem5++:amd64 libgetfem5++ 5.1+dfsg1-4 install ok installed libgfortran-6-dev:amd64 libgfortran-6-dev 6.3.0-18+deb9u1 install ok installed libgfortran3:amd64 libgfortran3 6.3.0-18+deb9u1 install ok installed libgmm++-dev libgmm++-dev 5.1+dfsg1-4 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-1+deb9u1 install ok installed libgomp1:amd64 libgomp1 6.3.0-18+deb9u1 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed libhwloc-dev:amd64 libhwloc-dev 1.11.5-1 install ok installed libhwloc-plugins libhwloc-plugins 1.11.5-1 install ok installed libhwloc5:amd64 libhwloc5 1.11.5-1 install ok installed libibverbs-dev libibverbs-dev 1.2.1-2 install ok installed libibverbs1 libibverbs1 1.2.1-2 install ok installed libicu57:amd64 libicu57 57.1-6+deb9u5 install ok installed libisl15:amd64 libisl15 0.18-1 install ok installed libitm1:amd64 libitm1 6.3.0-18+deb9u1 install ok installed liblapack3 liblapack3 3.7.0-2 install ok installed liblsan0:amd64 liblsan0 6.3.0-18+deb9u1 install ok installed libltdl-dev:amd64 libltdl-dev 2.4.6-2 install ok installed libltdl7:amd64 libltdl7 2.4.6-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+deb9u1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+deb9u1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libmpc3:amd64 libmpc3 1.0.3-1+b2 install ok installed libmpfr4:amd64 libmpfr4 3.1.5-1 install ok installed libmpx2:amd64 libmpx2 6.3.0-18+deb9u1 install ok installed libmumps-4.10.0 libmumps-4.10.0 4.10.0.dfsg-4+b2 install ok installed libmumps-dev libmumps-dev 4.10.0.dfsg-4+b2 install ok installed libmumps-seq-4.10.0 libmumps-seq-4.10.0 4.10.0.dfsg-4+b2 install ok installed libmuparser-dev libmuparser-dev 2.2.3-6 install ok installed libmuparser2v5:amd64 libmuparser2v5 2.2.3-6 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libnl-3-200:amd64 libnl-3-200 3.2.27-2 install ok installed libnl-route-3-200:amd64 libnl-route-3-200 3.2.27-2 install ok installed libnuma-dev:amd64 libnuma-dev 2.0.11-2.1 install ok installed libnuma1:amd64 libnuma1 2.0.11-2.1 install ok installed libopenmpi-dev libopenmpi-dev 2.0.2-2 install ok installed libopenmpi2:amd64 libopenmpi2 2.0.2-2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpciaccess0:amd64 libpciaccess0 0.13.4-1+b2 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libpsm-infinipath1 libpsm-infinipath1 3.3+19.g67c0807.open-3 install ok installed libqhull7:amd64 libqhull7 2015.2-2 install ok installed libquadmath0:amd64 libquadmath0 6.3.0-18+deb9u1 install ok installed librdmacm1 librdmacm1 1.1.0-2 install ok installed libscalapack-mpi-dev libscalapack-mpi-dev 1.8.0-13 install ok installed libscalapack-openmpi1 libscalapack-openmpi1 1.8.0-13 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u2 install ok installed libstdc++-6-dev:amd64 libstdc++-6-dev 6.3.0-18+deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsuperlu-dev:amd64 libsuperlu-dev 5.2.1+dfsg1-2 install ok installed libsuperlu5:amd64 libsuperlu5 5.2.1+dfsg1-2 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u14 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libtsan0:amd64 libtsan0 6.3.0-18+deb9u1 install ok installed libubsan0:amd64 libubsan0 6.3.0-18+deb9u1 install ok installed libudev1:amd64 libudev1 232-25+deb9u14 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed libxml2:amd64 libxml2 2.9.4+dfsg1-2.2+deb9u7 install ok installed linux-libc-dev:amd64 linux-libc-dev 4.9.320-2 install ok installed login login 1:4.4-4.1+deb9u1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed mpi-default-bin mpi-default-bin 1.8 install ok installed mpi-default-dev mpi-default-dev 1.8 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.2.11-1 install ok installed openmpi-bin openmpi-bin 2.0.2-2 install ok installed openmpi-common openmpi-common 2.0.2-2 install ok installed passwd passwd 1:4.4-4.1+deb9u1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1+deb9u1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5+deb9u1 0m33.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', 'remove', 'binutils', 'cpp', 'cpp-6', 'gcc', 'gcc-6', 'gfortran', 'gfortran-6', 'libasan3:amd64', 'libatomic1:amd64', 'libblacs-mpi-dev', 'libblacs-openmpi1', 'libblas-common', 'libblas-dev', 'libblas3', 'libboost-dev:amd64', 'libboost-system1.62.0:amd64', 'libboost1.62-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcilkrts5:amd64', 'libfabric1', 'libgcc-6-dev:amd64', 'libgetfem5++:amd64', 'libgfortran-6-dev:amd64', 'libgfortran3:amd64', 'libgmm++-dev', 'libgmp10:amd64', 'libgomp1:amd64', 'libhwloc-dev:amd64', 'libhwloc-plugins', 'libhwloc5:amd64', 'libibverbs-dev', 'libibverbs1', 'libicu57:amd64', 'libisl15:amd64', 'libitm1:amd64', 'liblapack3', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmpc3:amd64', 'libmpfr4:amd64', 'libmpx2:amd64', 'libmumps-4.10.0', 'libmumps-dev', 'libmumps-seq-4.10.0', 'libmuparser-dev', 'libmuparser2v5:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev', 'libopenmpi2:amd64', 'libpciaccess0:amd64', 'libpsm-infinipath1', 'libqhull7:amd64', 'libquadmath0:amd64', 'librdmacm1', 'libscalapack-mpi-dev', 'libscalapack-openmpi1', 'libstdc++-6-dev:amd64', 'libsuperlu-dev:amd64', 'libsuperlu5:amd64', 'libtsan0:amd64', 'libubsan0:amd64', 'libxml2:amd64', 'linux-libc-dev:amd64', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'libgetfem++-dev'] 0m34.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: binutils cpp cpp-6 gcc gcc-6 gfortran gfortran-6 libasan3 libatomic1 libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libboost-dev libboost-system1.62.0 libboost1.62-dev libc-dev-bin libc6-dev libcc1-0 libcilkrts5 libfabric1 libgcc-6-dev libgetfem++-dev libgetfem5++ libgfortran-6-dev libgfortran3 libgmm++-dev libgmp10 libgomp1 libhwloc-dev libhwloc-plugins libhwloc5 libibverbs-dev libibverbs1 libicu57 libisl15 libitm1 liblapack3 liblsan0 libltdl-dev libltdl7 libmpc3 libmpfr4 libmpx2 libmumps-4.10.0 libmumps-dev libmumps-seq-4.10.0 libmuparser-dev libmuparser2v5 libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpsm-infinipath1 libqhull7 libquadmath0 librdmacm1 libscalapack-mpi-dev libscalapack-openmpi1 libstdc++-6-dev libsuperlu-dev libsuperlu5 libtsan0 libubsan0 libxml2 linux-libc-dev mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common 0 upgraded, 0 newly installed, 75 to remove and 0 not upgraded. After this operation, 411 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22384 files and directories currently installed.) Removing libgetfem++-dev (5.1+dfsg1-4) ... Removing libsuperlu-dev:amd64 (5.2.1+dfsg1-2) ... Removing libblas-dev (3.7.0-2) ... Removing gfortran (4:6.3.0-4) ... Removing gcc (4:6.3.0-4) ... Removing gfortran-6 (6.3.0-18+deb9u1) ... Removing gcc-6 (6.3.0-18+deb9u1) ... Removing binutils (2.28-5) ... Removing cpp (4:6.3.0-4) ... Removing cpp-6 (6.3.0-18+deb9u1) ... Removing libboost-dev:amd64 (1.62.0.1) ... Removing libboost1.62-dev:amd64 (1.62.0+dfsg-4) ... Removing libstdc++-6-dev:amd64 (6.3.0-18+deb9u1) ... Removing libgfortran-6-dev:amd64 (6.3.0-18+deb9u1) ... Removing libgcc-6-dev:amd64 (6.3.0-18+deb9u1) ... Removing libasan3:amd64 (6.3.0-18+deb9u1) ... Removing libatomic1:amd64 (6.3.0-18+deb9u1) ... Removing libgmm++-dev (5.1+dfsg1-4) ... Removing libmumps-dev (4.10.0.dfsg-4+b2) ... Removing libscalapack-mpi-dev (1.8.0-13) ... Removing libblacs-mpi-dev (1.1-38) ... Removing libmumps-4.10.0 (4.10.0.dfsg-4+b2) ... Removing libscalapack-openmpi1 (1.8.0-13) ... Removing libblacs-openmpi1 (1.1-38) ... Removing libgetfem5++:amd64 (5.1+dfsg1-4) ... Removing libsuperlu5:amd64 (5.2.1+dfsg1-2) ... Removing libmumps-seq-4.10.0 (4.10.0.dfsg-4+b2) ... Removing liblapack3 (3.7.0-2) ... Removing libblas3 (3.7.0-2) ... Removing libblas-common (3.7.0-2) ... Removing libboost-system1.62.0:amd64 (1.62.0+dfsg-4) ... Removing mpi-default-dev (1.8) ... Removing libopenmpi-dev (2.0.2-2) ... Removing libhwloc-dev:amd64 (1.11.5-1) ... Removing libnuma-dev:amd64 (2.0.11-2.1) ... Removing libc6-dev:amd64 (2.24-11+deb9u4) ... Removing libc-dev-bin (2.24-11+deb9u4) ... Removing libcc1-0:amd64 (6.3.0-18+deb9u1) ... Removing libcilkrts5:amd64 (6.3.0-18+deb9u1) ... Removing mpi-default-bin (1.8) ... Removing openmpi-bin (2.0.2-2) ... Removing libopenmpi2:amd64 (2.0.2-2) ... Removing libfabric1 (1.4.0-1) ... Removing libgfortran3:amd64 (6.3.0-18+deb9u1) ... Removing libmpc3:amd64 (1.0.3-1+b2) ... Removing libmpfr4:amd64 (3.1.5-1) ... Removing libisl15:amd64 (0.18-1) ... Removing libgmp10:amd64 (2:6.1.2+dfsg-1+deb9u1) ... Removing libgomp1:amd64 (6.3.0-18+deb9u1) ... Removing libhwloc-plugins (1.11.5-1) ... Removing libhwloc5:amd64 (1.11.5-1) ... Removing libibverbs-dev (1.2.1-2) ... Removing librdmacm1 (1.1.0-2) ... Removing libibverbs1 (1.2.1-2) ... Removing libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u7) ... Removing libicu57:amd64 (57.1-6+deb9u5) ... Removing libitm1:amd64 (6.3.0-18+deb9u1) ... Removing liblsan0:amd64 (6.3.0-18+deb9u1) ... Removing libltdl-dev:amd64 (2.4.6-2) ... Removing libltdl7:amd64 (2.4.6-2) ... Removing libmpx2:amd64 (6.3.0-18+deb9u1) ... Removing libmuparser-dev (2.2.3-6) ... Removing libmuparser2v5:amd64 (2.2.3-6) ... Removing libnl-route-3-200:amd64 (3.2.27-2) ... Removing libnl-3-200:amd64 (3.2.27-2) ... Removing libnuma1:amd64 (2.0.11-2.1) ... Removing libpciaccess0:amd64 (0.13.4-1+b2) ... Removing libpsm-infinipath1 (3.3+19.g67c0807.open-3) ... Removing libqhull7:amd64 (2015.2-2) ... Removing libquadmath0:amd64 (6.3.0-18+deb9u1) ... Removing libtsan0:amd64 (6.3.0-18+deb9u1) ... Removing libubsan0:amd64 (6.3.0-18+deb9u1) ... Removing linux-libc-dev:amd64 (4.9.320-2) ... Removing ocl-icd-libopencl1:amd64 (2.2.11-1) ... Removing openmpi-common (2.0.2-2) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', 'remove', 'binutils', 'cpp', 'cpp-6', 'gcc', 'gcc-6', 'gfortran', 'gfortran-6', 'libasan3:amd64', 'libatomic1:amd64', 'libblacs-mpi-dev', 'libblacs-openmpi1', 'libblas-common', 'libblas-dev', 'libblas3', 'libboost-dev:amd64', 'libboost-system1.62.0:amd64', 'libboost1.62-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcilkrts5:amd64', 'libfabric1', 'libgcc-6-dev:amd64', 'libgetfem5++:amd64', 'libgfortran-6-dev:amd64', 'libgfortran3:amd64', 'libgmm++-dev', 'libgmp10:amd64', 'libgomp1:amd64', 'libhwloc-dev:amd64', 'libhwloc-plugins', 'libhwloc5:amd64', 'libibverbs-dev', 'libibverbs1', 'libicu57:amd64', 'libisl15:amd64', 'libitm1:amd64', 'liblapack3', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmpc3:amd64', 'libmpfr4:amd64', 'libmpx2:amd64', 'libmumps-4.10.0', 'libmumps-dev', 'libmumps-seq-4.10.0', 'libmuparser-dev', 'libmuparser2v5:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev', 'libopenmpi2:amd64', 'libpciaccess0:amd64', 'libpsm-infinipath1', 'libqhull7:amd64', 'libquadmath0:amd64', 'librdmacm1', 'libscalapack-mpi-dev', 'libscalapack-openmpi1', 'libstdc++-6-dev:amd64', 'libsuperlu-dev:amd64', 'libsuperlu5:amd64', 'libtsan0:amd64', 'libubsan0:amd64', 'libxml2:amd64', 'linux-libc-dev:amd64', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'libgetfem++-dev'] 0m34.6s INFO: Running scripts post_remove 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_remove_exceptions'] 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_remove_exceptions'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg', '--purge', 'binutils', 'cpp', 'cpp-6', 'gcc', 'gcc-6', 'gfortran', 'gfortran-6', 'libasan3:amd64', 'libatomic1:amd64', 'libblacs-mpi-dev', 'libblacs-openmpi1', 'libblas-common', 'libblas-dev', 'libblas3', 'libboost-dev:amd64', 'libboost-system1.62.0:amd64', 'libboost1.62-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcilkrts5:amd64', 'libfabric1', 'libgcc-6-dev:amd64', 'libgetfem5++:amd64', 'libgfortran-6-dev:amd64', 'libgfortran3:amd64', 'libgmm++-dev', 'libgmp10:amd64', 'libgomp1:amd64', 'libhwloc-dev:amd64', 'libhwloc-plugins', 'libhwloc5:amd64', 'libibverbs-dev', 'libibverbs1', 'libicu57:amd64', 'libisl15:amd64', 'libitm1:amd64', 'liblapack3', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmpc3:amd64', 'libmpfr4:amd64', 'libmpx2:amd64', 'libmumps-4.10.0', 'libmumps-dev', 'libmumps-seq-4.10.0', 'libmuparser-dev', 'libmuparser2v5:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev', 'libopenmpi2:amd64', 'libpciaccess0:amd64', 'libpsm-infinipath1', 'libqhull7:amd64', 'libquadmath0:amd64', 'librdmacm1', 'libscalapack-mpi-dev', 'libscalapack-openmpi1', 'libstdc++-6-dev:amd64', 'libsuperlu-dev:amd64', 'libsuperlu5:amd64', 'libtsan0:amd64', 'libubsan0:amd64', 'libxml2:amd64', 'linux-libc-dev:amd64', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common'] 0m34.6s DUMP: dpkg: warning: ignoring request to remove binutils which isn't installed dpkg: warning: ignoring request to remove cpp which isn't installed dpkg: warning: ignoring request to remove cpp-6 which isn't installed dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-6 which isn't installed dpkg: warning: ignoring request to remove gfortran which isn't installed dpkg: warning: ignoring request to remove gfortran-6 which isn't installed dpkg: warning: ignoring request to remove libasan3 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libblacs-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libblacs-openmpi1 which isn't installed dpkg: warning: ignoring request to remove libblas-common which isn't installed dpkg: warning: ignoring request to remove libblas-dev which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libboost-dev which isn't installed dpkg: warning: ignoring request to remove libboost-system1.62.0 which isn't installed dpkg: warning: ignoring request to remove libboost1.62-dev which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed dpkg: warning: ignoring request to remove libcilkrts5 which isn't installed dpkg: warning: ignoring request to remove libfabric1 which isn't installed dpkg: warning: ignoring request to remove libgcc-6-dev which isn't installed dpkg: warning: ignoring request to remove libgetfem5++ which isn't installed dpkg: warning: ignoring request to remove libgfortran-6-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran3 which isn't installed dpkg: warning: ignoring request to remove libgmm++-dev which isn't installed dpkg: warning: ignoring request to remove libgmp10 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libhwloc-dev which isn't installed dpkg: warning: ignoring request to remove libhwloc-plugins which isn't installed dpkg: warning: ignoring request to remove libhwloc5 which isn't installed dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed dpkg: warning: ignoring request to remove libibverbs1 which isn't installed dpkg: warning: ignoring request to remove libicu57 which isn't installed dpkg: warning: ignoring request to remove libisl15 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove libltdl-dev which isn't installed dpkg: warning: ignoring request to remove libltdl7 which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpfr4 which isn't installed dpkg: warning: ignoring request to remove libmpx2 which isn't installed dpkg: warning: ignoring request to remove libmumps-4.10.0 which isn't installed dpkg: warning: ignoring request to remove libmumps-dev which isn't installed dpkg: warning: ignoring request to remove libmumps-seq-4.10.0 which isn't installed dpkg: warning: ignoring request to remove libmuparser-dev which isn't installed (Reading database ... 4418 files and directories currently installed.) Purging configuration files for libmuparser2v5:amd64 (2.2.3-6) ... Purging configuration files for libnl-3-200:amd64 (3.2.27-2) ... dpkg: warning: ignoring request to remove libnl-route-3-200 which isn't installed dpkg: warning: ignoring request to remove libnuma-dev which isn't installed dpkg: warning: ignoring request to remove libnuma1 which isn't installed dpkg: warning: ignoring request to remove libopenmpi-dev which isn't installed dpkg: warning: ignoring request to remove libopenmpi2 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libpsm-infinipath1 which isn't installed dpkg: warning: ignoring request to remove libqhull7 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove librdmacm1 which isn't installed dpkg: warning: ignoring request to remove libscalapack-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libscalapack-openmpi1 which isn't installed dpkg: warning: ignoring request to remove libstdc++-6-dev which isn't installed dpkg: warning: ignoring request to remove libsuperlu-dev which isn't installed dpkg: warning: ignoring request to remove libsuperlu5 which isn't installed dpkg: warning: ignoring request to remove libtsan0 which isn't installed dpkg: warning: ignoring request to remove libubsan0 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed dpkg: warning: ignoring request to remove mpi-default-bin which isn't installed dpkg: warning: ignoring request to remove mpi-default-dev which isn't installed dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which isn't installed Purging configuration files for openmpi-bin (2.0.2-2) ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg', '--purge', 'binutils', 'cpp', 'cpp-6', 'gcc', 'gcc-6', 'gfortran', 'gfortran-6', 'libasan3:amd64', 'libatomic1:amd64', 'libblacs-mpi-dev', 'libblacs-openmpi1', 'libblas-common', 'libblas-dev', 'libblas3', 'libboost-dev:amd64', 'libboost-system1.62.0:amd64', 'libboost1.62-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcilkrts5:amd64', 'libfabric1', 'libgcc-6-dev:amd64', 'libgetfem5++:amd64', 'libgfortran-6-dev:amd64', 'libgfortran3:amd64', 'libgmm++-dev', 'libgmp10:amd64', 'libgomp1:amd64', 'libhwloc-dev:amd64', 'libhwloc-plugins', 'libhwloc5:amd64', 'libibverbs-dev', 'libibverbs1', 'libicu57:amd64', 'libisl15:amd64', 'libitm1:amd64', 'liblapack3', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmpc3:amd64', 'libmpfr4:amd64', 'libmpx2:amd64', 'libmumps-4.10.0', 'libmumps-dev', 'libmumps-seq-4.10.0', 'libmuparser-dev', 'libmuparser2v5:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev', 'libopenmpi2:amd64', 'libpciaccess0:amd64', 'libpsm-infinipath1', 'libqhull7:amd64', 'libquadmath0:amd64', 'librdmacm1', 'libscalapack-mpi-dev', 'libscalapack-openmpi1', 'libstdc++-6-dev:amd64', 'libsuperlu-dev:amd64', 'libsuperlu5:amd64', 'libtsan0:amd64', 'libubsan0:amd64', 'libxml2:amd64', 'linux-libc-dev:amd64', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg', '--purge', 'libgetfem++-dev'] 0m34.6s DUMP: dpkg: warning: ignoring request to remove libgetfem++-dev which isn't installed 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg', '--purge', 'libgetfem++-dev'] 0m34.6s INFO: Running scripts post_purge 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_purge_exceptions'] 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_purge_exceptions'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg', '--purge', '--pending'] 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg', '--purge', '--pending'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg', '--remove', '--pending'] 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg', '--remove', '--pending'] 0m34.6s INFO: Running scripts post_test 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_test_exceptions'] 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'tmp/scripts/post_test_exceptions'] 0m34.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m34.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m34.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg-divert', '--list'] 0m34.9s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m34.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'dpkg-divert', '--list'] 0m34.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', 'clean'] 0m34.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6io_x610', 'apt-get', 'clean'] 0m34.9s DEBUG: Recording chroot state 0m35.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/shm'] 0m35.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/shm'] 0m35.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/console'] 0m35.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/console'] 0m35.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/ptmx'] 0m35.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/ptmx'] 0m35.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/pts'] 0m35.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/dev/pts'] 0m35.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/proc'] 0m35.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6io_x610/proc'] 0m35.7s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m35.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6io_x610'] 0m35.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp6io_x610 0m35.7s INFO: PASS: Upgrading between Debian distributions. 0m35.7s INFO: PASS: All tests. 0m35.7s INFO: piuparts run ends. ret=0 End: 2023-02-23 07:37:09 GMT