Start: 2023-04-20 20:40:51 GMT [stretch] Package: librelion+mpi-1.4-1 Source: relion (1.4+dfsg-2) Version: 1.4+dfsg-2+b2 Installed-Size: 1761 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: librelion+mpi-1.3-1, librelion+mpi-1.3-1v5 Depends: libc6 (>= 2.14), libfftw3-double3 (>= 3.3.5), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Conflicts: librelion+gui-1.3-1, librelion+gui-1.3-1v5, librelion+gui-1.4-1, librelion+mpi+gui-1.3-1, librelion+mpi+gui-1.3-1v5, librelion+mpi+gui-1.4-1, librelion+mpi-1.3-1, librelion+mpi-1.3-1v5, librelion-1.3-1, librelion-1.3-1v5, librelion-1.4-1 Description: RELION dynnamic library (3D reconstructions in cryo-electron microscopy) Multi-Arch: same Homepage: http://www2.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page Description-md5: 200bca434f3d9d4eec29761af33e6edd Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/r/relion/librelion+mpi-1.4-1_1.4+dfsg-2+b2_amd64.deb Size: 586224 MD5sum: 65f9a2b37f87154c7b052efc1d03294b SHA256: b4f1c8cf2cc131b44ac40f8b054f968e66e71065eac57ca7069a0f8208e51eed [stretch-lts] Package: librelion+mpi-1.4-1 Source: relion (1.4+dfsg-2) Version: 1.4+dfsg-2+b2 Installed-Size: 1761 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: librelion+mpi-1.3-1, librelion+mpi-1.3-1v5 Depends: libc6 (>= 2.14), libfftw3-double3 (>= 3.3.5), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Conflicts: librelion+gui-1.3-1, librelion+gui-1.3-1v5, librelion+gui-1.4-1, librelion+mpi+gui-1.3-1, librelion+mpi+gui-1.3-1v5, librelion+mpi+gui-1.4-1, librelion+mpi-1.3-1, librelion+mpi-1.3-1v5, librelion-1.3-1, librelion-1.3-1v5, librelion-1.4-1 Description: RELION dynnamic library (3D reconstructions in cryo-electron microscopy) Multi-Arch: same Homepage: http://www2.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page Description-md5: 200bca434f3d9d4eec29761af33e6edd Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/r/relion/librelion+mpi-1.4-1_1.4+dfsg-2+b2_amd64.deb Size: 586224 MD5sum: 65f9a2b37f87154c7b052efc1d03294b SHA256: b4f1c8cf2cc131b44ac40f8b054f968e66e71065eac57ca7069a0f8208e51eed Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d stretch-lts -B /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat --apt librelion+mpi-1.4-1=1.4+dfsg-2+b2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d stretch-lts -B /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat --apt librelion+mpi-1.4-1=1.4+dfsg-2+b2 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpf4z9y82d 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpf4z9y82d 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/proc'] 0m1.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/proc'] 0m1.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/pts'] 0m1.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/pts'] 0m1.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/ptmx'] 0m1.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/ptmx'] 0m1.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/console'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/console'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/shm'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/shm'] 0m1.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main 0m1.4s DEBUG: Created policy-rc.d and chmodded it. 0m1.4s DEBUG: Created resolv.conf. 0m1.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpf4z9y82d/tmp/scripts/ 0m1.4s INFO: Running scripts post_chroot_unpack 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', 'update'] 0m2.1s DUMP: Ign:1 http://deb.debian.org/debian stretch InRelease Hit:2 http://deb.debian.org/debian stretch Release Reading package lists... 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', 'update'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.0s DUMP: 660e5103244a20b75ca08c3f8741e16e - 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.0s INFO: Running scripts post_setup 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_dummy_users'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_dummy_users'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_forbid_home'] 0m3.8s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_forbid_home'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.8s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' '/bin/sync' -> 'true' 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_minimize'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_minimize'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_zz_backports'] 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_setup_zz_backports'] 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.8s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.10 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u1 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.25 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u1 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u1 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+b1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.10 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+b1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+b1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u12 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u12 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed login login 1:4.4-4.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed passwd passwd 1:4.4-4.1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.8s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat 0m3.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m4.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m4.1s INFO: Running scripts is_testable 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/is_testable_uninstallable'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/is_testable_uninstallable'] 0m4.1s INFO: Running scripts pre_test 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_test_exceptions'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_test_exceptions'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_test_root_password'] 0m4.1s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_test_root_password'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'show', '--no-all-versions', 'librelion+mpi-1.4-1'] 0m4.2s DUMP: Package: librelion+mpi-1.4-1 Source: relion (1.4+dfsg-2) Version: 1.4+dfsg-2+b2 Installed-Size: 1761 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: librelion+mpi-1.3-1, librelion+mpi-1.3-1v5 Depends: libc6 (>= 2.14), libfftw3-double3 (>= 3.3.5), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Conflicts: librelion+gui-1.3-1, librelion+gui-1.3-1v5, librelion+gui-1.4-1, librelion+mpi+gui-1.3-1, librelion+mpi+gui-1.3-1v5, librelion+mpi+gui-1.4-1, librelion+mpi-1.3-1, librelion+mpi-1.3-1v5, librelion-1.3-1, librelion-1.3-1v5, librelion-1.4-1 Description-en: RELION dynnamic library (3D reconstructions in cryo-electron microscopy) RELION (for REgularised LIkelihood OptimisatioN) is a stand-alone computer program for Maximum A Posteriori refinement of (multiple) 3D reconstructions or 2D class averages in cryo-electron microscopy. . RELION provides a GUI, several command-line tools in parallel (MPI) and serial versions as well as a C++ API. . This is the runtime library for use with MPI but without GUI. Description-md5: 200bca434f3d9d4eec29761af33e6edd Multi-Arch: same Homepage: http://www2.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/r/relion/librelion+mpi-1.4-1_1.4+dfsg-2+b2_amd64.deb Size: 586224 MD5sum: 65f9a2b37f87154c7b052efc1d03294b SHA256: b4f1c8cf2cc131b44ac40f8b054f968e66e71065eac57ca7069a0f8208e51eed 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'show', '--no-all-versions', 'librelion+mpi-1.4-1'] 0m4.2s INFO: apt-cache knows about the following packages: librelion+mpi-1.4-1 0m4.2s INFO: Running scripts pre_install 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_database-server'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_database-server'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_exceptions'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_exceptions'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_extras'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_extras'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy'] 0m4.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy', 'librelion+mpi-1.4-1'] 0m4.4s DUMP: librelion+mpi-1.4-1: Installed: (none) Candidate: 1.4+dfsg-2+b2 Version table: 1.4+dfsg-2+b2 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy', 'librelion+mpi-1.4-1'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-y', 'install', 'librelion+mpi-1.4-1'] 0m5.4s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: libfftw3-double3 libgomp1 Suggested packages: libfftw3-bin libfftw3-dev The following NEW packages will be installed: libfftw3-double3 libgomp1 librelion+mpi-1.4-1 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 1391 kB of archives. After this operation, 4187 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian stretch/main amd64 libgomp1 amd64 6.3.0-18+deb9u1 [73.3 kB] Get:2 http://deb.debian.org/debian stretch/main amd64 libfftw3-double3 amd64 3.3.5-3 [731 kB] Get:3 http://deb.debian.org/debian stretch/main amd64 librelion+mpi-1.4-1 amd64 1.4+dfsg-2+b2 [586 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1391 kB in 0s (3323 kB/s) Selecting previously unselected package libgomp1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4411 files and directories currently installed.) Preparing to unpack .../libgomp1_6.3.0-18+deb9u1_amd64.deb ... Unpacking libgomp1:amd64 (6.3.0-18+deb9u1) ... Selecting previously unselected package libfftw3-double3:amd64. Preparing to unpack .../libfftw3-double3_3.3.5-3_amd64.deb ... Unpacking libfftw3-double3:amd64 (3.3.5-3) ... Selecting previously unselected package librelion+mpi-1.4-1:amd64. Preparing to unpack .../librelion+mpi-1.4-1_1.4+dfsg-2+b2_amd64.deb ... Unpacking librelion+mpi-1.4-1:amd64 (1.4+dfsg-2+b2) ... Setting up libgomp1:amd64 (6.3.0-18+deb9u1) ... Setting up libfftw3-double3:amd64 (3.3.5-3) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... Setting up librelion+mpi-1.4-1:amd64 (1.4+dfsg-2+b2) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-y', 'install', 'librelion+mpi-1.4-1'] 0m5.4s INFO: Running scripts post_install 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_install_exceptions'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_install_exceptions'] 0m5.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m5.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m5.7s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpf4z9y82d to stretch-lts 0m5.7s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main deb http://security.debian.org stretch/updates main 0m5.7s INFO: Running scripts pre_distupgrade 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_exceptions'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_exceptions'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', 'update'] 0m6.8s DUMP: Get:1 http://security.debian.org stretch/updates InRelease [59.1 kB] Ign:2 http://deb.debian.org/debian stretch InRelease Hit:3 http://deb.debian.org/debian stretch Release Get:4 http://security.debian.org stretch/updates/main amd64 Packages [782 kB] Get:5 http://security.debian.org stretch/updates/main Translation-en [368 kB] Fetched 1209 kB in 0s (3270 kB/s) Reading package lists... 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', 'update'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-yf', 'dist-upgrade'] 0m9.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt debian-archive-keyring dpkg e2fslibs e2fsprogs gzip libapt-pkg5.0 libcomerr2 libgcrypt20 liblz4-1 liblzma5 libss2 libsystemd0 libudev1 login passwd tar zlib1g 18 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 9594 kB of archives. After this operation, 50.2 kB of additional disk space will be used. Get:1 http://security.debian.org stretch/updates/main amd64 tar amd64 1.29b-1.1+deb9u1 [760 kB] Get:2 http://security.debian.org stretch/updates/main amd64 dpkg amd64 1.18.26 [2117 kB] Get:3 http://security.debian.org stretch/updates/main amd64 e2fslibs amd64 1.43.4-2+deb9u2 [208 kB] Get:4 http://security.debian.org stretch/updates/main amd64 e2fsprogs amd64 1.43.4-2+deb9u2 [948 kB] Get:5 http://security.debian.org stretch/updates/main amd64 gzip amd64 1.6-5+deb9u1 [114 kB] Get:6 http://security.debian.org stretch/updates/main amd64 login amd64 1:4.4-4.1+deb9u1 [790 kB] Get:7 http://security.debian.org stretch/updates/main amd64 debian-archive-keyring all 2017.5+deb9u2 [92.4 kB] Get:8 http://security.debian.org stretch/updates/main amd64 liblz4-1 amd64 0.0~r131-2+deb9u1 [33.2 kB] Get:9 http://security.debian.org stretch/updates/main amd64 liblzma5 amd64 5.2.2-1.2+deb9u1 [234 kB] Get:10 http://security.debian.org stretch/updates/main amd64 zlib1g amd64 1:1.2.8.dfsg-5+deb9u1 [87.8 kB] Get:11 http://security.debian.org stretch/updates/main amd64 libapt-pkg5.0 amd64 1.4.11 [917 kB] Get:12 http://security.debian.org stretch/updates/main amd64 apt amd64 1.4.11 [1232 kB] Get:13 http://security.debian.org stretch/updates/main amd64 libsystemd0 amd64 232-25+deb9u14 [282 kB] Get:14 http://security.debian.org stretch/updates/main amd64 libcomerr2 amd64 1.43.4-2+deb9u2 [63.8 kB] Get:15 http://security.debian.org stretch/updates/main amd64 libss2 amd64 1.43.4-2+deb9u2 [68.0 kB] Get:16 http://security.debian.org stretch/updates/main amd64 passwd amd64 1:4.4-4.1+deb9u1 [997 kB] Get:17 http://security.debian.org stretch/updates/main amd64 libudev1 amd64 232-25+deb9u14 [126 kB] Get:18 http://security.debian.org stretch/updates/main amd64 libgcrypt20 amd64 1.7.6-2+deb9u4 [523 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9594 kB in 0s (80.4 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../tar_1.29b-1.1+deb9u1_amd64.deb ... Unpacking tar (1.29b-1.1+deb9u1) over (1.29b-1.1) ... Setting up tar (1.29b-1.1+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../dpkg_1.18.26_amd64.deb ... Unpacking dpkg (1.18.26) over (1.18.25) ... Setting up dpkg (1.18.26) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../e2fslibs_1.43.4-2+deb9u2_amd64.deb ... Unpacking e2fslibs:amd64 (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up e2fslibs:amd64 (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.43.4-2+deb9u2_amd64.deb ... Unpacking e2fsprogs (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up e2fsprogs (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../gzip_1.6-5+deb9u1_amd64.deb ... Unpacking gzip (1.6-5+deb9u1) over (1.6-5+b1) ... Setting up gzip (1.6-5+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4432 files and directories currently installed.) Preparing to unpack .../login_1%3a4.4-4.1+deb9u1_amd64.deb ... Unpacking login (1:4.4-4.1+deb9u1) over (1:4.4-4.1) ... Setting up login (1:4.4-4.1+deb9u1) ... Installing new version of config file /etc/securetty ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4432 files and directories currently installed.) Preparing to unpack .../debian-archive-keyring_2017.5+deb9u2_all.deb ... Unpacking debian-archive-keyring (2017.5+deb9u2) over (2017.5+deb9u1) ... Setting up debian-archive-keyring (2017.5+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4435 files and directories currently installed.) Preparing to unpack .../liblz4-1_0.0~r131-2+deb9u1_amd64.deb ... Unpacking liblz4-1:amd64 (0.0~r131-2+deb9u1) over (0.0~r131-2+b1) ... Setting up liblz4-1:amd64 (0.0~r131-2+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4434 files and directories currently installed.) Preparing to unpack .../liblzma5_5.2.2-1.2+deb9u1_amd64.deb ... Unpacking liblzma5:amd64 (5.2.2-1.2+deb9u1) over (5.2.2-1.2+b1) ... Setting up liblzma5:amd64 (5.2.2-1.2+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.2.8.dfsg-5+deb9u1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.8.dfsg-5+deb9u1) over (1:1.2.8.dfsg-5) ... Setting up zlib1g:amd64 (1:1.2.8.dfsg-5+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../libapt-pkg5.0_1.4.11_amd64.deb ... Unpacking libapt-pkg5.0:amd64 (1.4.11) over (1.4.10) ... Setting up libapt-pkg5.0:amd64 (1.4.11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../archives/apt_1.4.11_amd64.deb ... Unpacking apt (1.4.11) over (1.4.10) ... Setting up apt (1.4.11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../libsystemd0_232-25+deb9u14_amd64.deb ... Unpacking libsystemd0:amd64 (232-25+deb9u14) over (232-25+deb9u12) ... Setting up libsystemd0:amd64 (232-25+deb9u14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../libcomerr2_1.43.4-2+deb9u2_amd64.deb ... Unpacking libcomerr2:amd64 (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up libcomerr2:amd64 (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../libss2_1.43.4-2+deb9u2_amd64.deb ... Unpacking libss2:amd64 (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up libss2:amd64 (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.4-4.1+deb9u1_amd64.deb ... Unpacking passwd (1:4.4-4.1+deb9u1) over (1:4.4-4.1) ... Setting up passwd (1:4.4-4.1+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../libudev1_232-25+deb9u14_amd64.deb ... Unpacking libudev1:amd64 (232-25+deb9u14) over (232-25+deb9u12) ... Setting up libudev1:amd64 (232-25+deb9u14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.7.6-2+deb9u4_amd64.deb ... Unpacking libgcrypt20:amd64 (1.7.6-2+deb9u4) over (1.7.6-2+deb9u3) ... Setting up libgcrypt20:amd64 (1.7.6-2+deb9u4) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-yf', 'dist-upgrade'] 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m10.3s DUMP: f0660a0a38f941b755664f52e8306b99 - 0m10.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m10.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'show', '--no-all-versions', 'librelion+mpi-1.4-1'] 0m10.6s DUMP: Package: librelion+mpi-1.4-1 Source: relion (1.4+dfsg-2) Version: 1.4+dfsg-2+b2 Installed-Size: 1761 Maintainer: Debian Med Packaging Team Architecture: amd64 Replaces: librelion+mpi-1.3-1, librelion+mpi-1.3-1v5 Depends: libc6 (>= 2.14), libfftw3-double3 (>= 3.3.5), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Conflicts: librelion+gui-1.3-1, librelion+gui-1.3-1v5, librelion+gui-1.4-1, librelion+mpi+gui-1.3-1, librelion+mpi+gui-1.3-1v5, librelion+mpi+gui-1.4-1, librelion+mpi-1.3-1, librelion+mpi-1.3-1v5, librelion-1.3-1, librelion-1.3-1v5, librelion-1.4-1 Description-en: RELION dynnamic library (3D reconstructions in cryo-electron microscopy) RELION (for REgularised LIkelihood OptimisatioN) is a stand-alone computer program for Maximum A Posteriori refinement of (multiple) 3D reconstructions or 2D class averages in cryo-electron microscopy. . RELION provides a GUI, several command-line tools in parallel (MPI) and serial versions as well as a C++ API. . This is the runtime library for use with MPI but without GUI. Description-md5: 200bca434f3d9d4eec29761af33e6edd Multi-Arch: same Homepage: http://www2.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/r/relion/librelion+mpi-1.4-1_1.4+dfsg-2+b2_amd64.deb Size: 586224 MD5sum: 65f9a2b37f87154c7b052efc1d03294b SHA256: b4f1c8cf2cc131b44ac40f8b054f968e66e71065eac57ca7069a0f8208e51eed 0m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'show', '--no-all-versions', 'librelion+mpi-1.4-1'] 0m10.6s INFO: apt-cache knows about the following packages: librelion+mpi-1.4-1 0m10.6s INFO: Running scripts pre_install 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_database-server'] 0m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_database-server'] 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_exceptions'] 0m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_exceptions'] 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_extras'] 0m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_extras'] 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy'] 0m10.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org stretch/updates/main amd64 Packages release v=9,o=Debian,a=oldoldstable,n=stretch,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy', 'librelion+mpi-1.4-1'] 0m10.8s DUMP: librelion+mpi-1.4-1: Installed: 1.4+dfsg-2+b2 Candidate: 1.4+dfsg-2+b2 Version table: *** 1.4+dfsg-2+b2 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 100 /var/lib/dpkg/status 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy', 'librelion+mpi-1.4-1'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-y', 'install', 'librelion+mpi-1.4-1'] 0m11.0s DUMP: Reading package lists... Building dependency tree... Reading state information... librelion+mpi-1.4-1 is already the newest version (1.4+dfsg-2+b2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m11.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-y', 'install', 'librelion+mpi-1.4-1'] 0m11.0s INFO: Running scripts post_install 0m11.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_install_exceptions'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_install_exceptions'] 0m11.1s INFO: Running scripts post_distupgrade 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_exceptions'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_exceptions'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_zz_backports'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_distupgrade_zz_backports'] 0m11.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m11.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m11.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m11.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m11.6s INFO: Running scripts pre_install 0m11.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_database-server'] 0m11.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_database-server'] 0m11.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_exceptions'] 0m11.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_exceptions'] 0m11.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_extras'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_extras'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy'] 0m11.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org stretch/updates/main amd64 Packages release v=9,o=Debian,a=oldoldstable,n=stretch,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy', 'librelion+mpi-1.4-1'] 0m11.8s DUMP: librelion+mpi-1.4-1: Installed: 1.4+dfsg-2+b2 Candidate: 1.4+dfsg-2+b2 Version table: *** 1.4+dfsg-2+b2 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 100 /var/lib/dpkg/status 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-cache', 'policy', 'librelion+mpi-1.4-1'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-y', 'install', 'librelion+mpi-1.4-1=1.4+dfsg-2+b2'] 0m12.0s DUMP: Reading package lists... Building dependency tree... Reading state information... librelion+mpi-1.4-1 is already the newest version (1.4+dfsg-2+b2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m12.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', '-y', 'install', 'librelion+mpi-1.4-1=1.4+dfsg-2+b2'] 0m12.0s INFO: Running scripts post_install 0m12.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_install_exceptions'] 0m12.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_install_exceptions'] 0m12.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m12.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m12.5s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', '-ac', '--ignore-obsolete'] 0m12.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', '-ac', '--ignore-obsolete'] 0m12.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m12.9s DUMP: 0.15.6 0m12.9s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m12.9s INFO: Running adequate version 0.15.6 now. 0m12.9s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'librelion+mpi-1.4-1'] 0m13.0s DUMP: librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => _ZN3MPI8Datatype4FreeEv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => _ZN3MPI3Win4FreeEv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_cxx_op_intercept librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_op_sum librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_unlock librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_excl librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Allgather librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Recv_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_get_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_char librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_dup librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Irsend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Bcast librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Ssend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_range_incl librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Op_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_disconnect librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_get_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Pack_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Request_get_status librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_neighbors librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_hvector librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Unpack_external librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Probe librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Send librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Errhandler_set librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_set librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_extent librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_post librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Isend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Unpack librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Iprobe librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_comm_world librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_set_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_envelope librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Alltoall librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cancel librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Initialized librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Scatterv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Issend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => _ZN3MPI4CommC2Ev librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graphdims_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_shift librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_true_extent librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_contiguous librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_sub librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Scatter librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_get_group librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Ssend_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_spawn librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Barrier librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_start librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Pack_external librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Rsend_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_incl librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Bsend_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Sendrecv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Finalize librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Request_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Gather librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Grequest_complete librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_darray librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_wait librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Rsend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Recv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_group librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_double librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Op_commutative librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_map librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_set_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Test_cancelled librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_map librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Exscan librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Pack librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Errhandler_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Abort librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Intercomm_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cartdim_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_coords librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_op_set_cxx_callback librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Get_elements librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_long librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_delete_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Send_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_get_nkeys librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Bsend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Scan librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_hindexed librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Reduce_local librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Reduce_scatter librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Error_string librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_lock librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Allreduce librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Allgatherv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_range_excl librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_comm_null librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_commit librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Wtime librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Put librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Status_set_elements librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_get_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Reduce librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_remote_group librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_int librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Wait librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_dup librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Sendrecv_replace librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Irecv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Alltoallw librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Error_class librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_indexed_block librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_contents librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_get_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_rank librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_delete librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Topo_test librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Get_count librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_get_nthkey librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_set_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_remote_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_dup librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_set_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Ibsend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Alltoallv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Op_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_connect librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_split librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_subarray librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_spawn_multiple librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Test librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_get_valuelen librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_test librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_vector librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Start librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_call_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_indexed librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_set_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_fence librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_complete librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_resized librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_rank librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_accept librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_set_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_delete_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_delete_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Gatherv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_rank librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_errors_return librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Intercomm_merge librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_get_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Accumulate librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_set_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Status_set_cancelled librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_neighbors_count librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Pack_external_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_set_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_test_inter 0m13.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'librelion+mpi-1.4-1'] 0m13.0s ERROR: WARN: Inadequate results from running adequate! librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => _ZN3MPI8Datatype4FreeEv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => _ZN3MPI3Win4FreeEv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_cxx_op_intercept librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_op_sum librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_unlock librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_excl librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Allgather librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Recv_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_get_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_char librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_dup librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Irsend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Bcast librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Ssend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_range_incl librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Op_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_disconnect librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_get_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Pack_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Request_get_status librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_neighbors librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_hvector librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Unpack_external librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Probe librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Send librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Errhandler_set librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_set librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_extent librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_post librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Isend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Unpack librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Iprobe librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_comm_world librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_set_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_envelope librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Alltoall librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cancel librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Initialized librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Scatterv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Issend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => _ZN3MPI4CommC2Ev librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graphdims_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_shift librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_true_extent librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_contiguous librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_sub librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Scatter librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_get_group librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Ssend_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_spawn librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Barrier librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_start librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Pack_external librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Rsend_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_incl librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Bsend_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Sendrecv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Finalize librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Request_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Gather librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Grequest_complete librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_darray librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_wait librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Rsend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Recv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_group librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_double librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Op_commutative librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_map librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_set_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Test_cancelled librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_map librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Exscan librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Pack librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Errhandler_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Abort librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Intercomm_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cartdim_get librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_coords librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_op_set_cxx_callback librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Get_elements librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_long librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_delete_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Send_init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_get_nkeys librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Bsend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Scan librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_hindexed librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Reduce_local librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Reduce_scatter librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Error_string librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_lock librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Allreduce librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Allgatherv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_range_excl librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_comm_null librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_commit librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Wtime librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Put librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Status_set_elements librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_get_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Reduce librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_remote_group librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_int librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Wait librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_dup librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Sendrecv_replace librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Irecv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Alltoallw librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Error_class librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_indexed_block librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_get_contents librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_get_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_rank librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Init librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_delete librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Topo_test librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Get_count librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_get_nthkey librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_set_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_remote_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_dup librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_set_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Ibsend librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Alltoallv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Op_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_connect librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_split librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_subarray librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_spawn_multiple librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Test librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_get_valuelen librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_test librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_vector librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Start librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_call_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_indexed librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_set_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_fence librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_complete librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_create_resized librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Cart_rank librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_accept librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_set_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_delete_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_delete_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Gatherv librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Group_rank librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => ompi_mpi_errors_return librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Intercomm_merge librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Win_get_errhandler librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Accumulate librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_set_attr librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Status_set_cancelled librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_neighbors_count librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Info_free librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Pack_external_size librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Type_set_name librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Graph_create librelion+mpi-1.4-1:amd64: undefined-symbol /usr/lib/x86_64-linux-gnu/librelion-1.4.so.1.0.4 => MPI_Comm_test_inter 0m13.0s ERROR: WARN: Running adequate resulted in inadequate tags found: undefined-symbol 0m13.0s INFO: Running scripts pre_remove 0m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m13.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m13.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m13.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m13.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m13.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m13.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m13.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m13.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_exceptions'] 0m13.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/pre_remove_exceptions'] 0m13.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m13.5s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.11 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u2 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.26 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u2 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u2 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+deb9u1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.11 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libfftw3-double3:amd64 libfftw3-double3 3.3.5-3 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u4 install ok installed libgomp1:amd64 libgomp1 6.3.0-18+deb9u1 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+deb9u1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+deb9u1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed librelion+mpi-1.4-1:amd64 librelion+mpi-1.4-1 1.4+dfsg-2+b2 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u2 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u14 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u14 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed login login 1:4.4-4.1+deb9u1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed passwd passwd 1:4.4-4.1+deb9u1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1+deb9u1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5+deb9u1 0m13.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m13.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', 'remove', 'libfftw3-double3:amd64', 'libgomp1:amd64', 'librelion+mpi-1.4-1:amd64'] 0m14.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libfftw3-double3 libgomp1 librelion+mpi-1.4-1 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. After this operation, 4187 kB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4433 files and directories currently installed.) Removing librelion+mpi-1.4-1:amd64 (1.4+dfsg-2+b2) ... Removing libfftw3-double3:amd64 (3.3.5-3) ... Removing libgomp1:amd64 (6.3.0-18+deb9u1) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m14.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', 'remove', 'libfftw3-double3:amd64', 'libgomp1:amd64', 'librelion+mpi-1.4-1:amd64'] 0m14.0s INFO: Running scripts post_remove 0m14.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_remove_exceptions'] 0m14.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_remove_exceptions'] 0m14.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg', '--purge', 'libfftw3-double3:amd64', 'libgomp1:amd64', 'librelion+mpi-1.4-1:amd64'] 0m14.0s DUMP: dpkg: warning: ignoring request to remove libfftw3-double3 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove librelion+mpi-1.4-1 which isn't installed 0m14.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg', '--purge', 'libfftw3-double3:amd64', 'libgomp1:amd64', 'librelion+mpi-1.4-1:amd64'] 0m14.0s INFO: Running scripts post_purge 0m14.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_purge_exceptions'] 0m14.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_purge_exceptions'] 0m14.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg', '--purge', '--pending'] 0m14.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg', '--purge', '--pending'] 0m14.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg', '--remove', '--pending'] 0m14.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg', '--remove', '--pending'] 0m14.0s INFO: Running scripts post_test 0m14.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_test_exceptions'] 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'tmp/scripts/post_test_exceptions'] 0m14.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m14.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg-divert', '--list'] 0m14.3s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'dpkg-divert', '--list'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', 'clean'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d', 'apt-get', 'clean'] 0m14.3s DEBUG: Recording chroot state 0m14.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/shm'] 0m14.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/shm'] 0m14.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/console'] 0m14.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/console'] 0m14.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/ptmx'] 0m14.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/ptmx'] 0m14.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/pts'] 0m14.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/dev/pts'] 0m14.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/proc'] 0m15.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d/proc'] 0m15.0s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m15.1s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpf4z9y82d'] 0m15.1s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpf4z9y82d 0m15.1s INFO: PASS: Upgrading between Debian distributions. 0m15.1s INFO: PASS: All tests. 0m15.1s INFO: piuparts run ends. ret=0 End: 2023-04-20 20:41:07 GMT