Start: 2023-03-01 01:23:10 GMT [stretch] Package: libsbml5-cil Source: libsbml Version: 5.13.0+dfsg-1 Installed-Size: 10654 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libsbml-cil Depends: libbz2-1.0, libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), libxml2 (>= 2.7.4), zlib1g (>= 1:1.1.4), libmono-corlib4.5-cil (>= 4.6.1.3), libsbml5-dev Description: System Biology Markup Language library - CLI bindings Homepage: http://www.sbml.org/ Description-md5: 6923ba76f814ada93ced1087327fce79 Section: cli-mono Priority: optional Filename: pool/main/libs/libsbml/libsbml5-cil_5.13.0+dfsg-1_amd64.deb Size: 2207642 MD5sum: 745ae766f51d6e67c49aa5e2ffe5a181 SHA256: 6530b8952cc13ea192f97c3a8c7fc3af8584680430f8ee58c62a9e64c48bb5dc [stretch-lts] Package: libsbml5-cil Source: libsbml Version: 5.13.0+dfsg-1 Installed-Size: 10654 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libsbml-cil Depends: libbz2-1.0, libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), libxml2 (>= 2.7.4), zlib1g (>= 1:1.1.4), libmono-corlib4.5-cil (>= 4.6.1.3), libsbml5-dev Description: System Biology Markup Language library - CLI bindings Homepage: http://www.sbml.org/ Description-md5: 6923ba76f814ada93ced1087327fce79 Section: cli-mono Priority: optional Filename: pool/main/libs/libsbml/libsbml5-cil_5.13.0+dfsg-1_amd64.deb Size: 2207642 MD5sum: 745ae766f51d6e67c49aa5e2ffe5a181 SHA256: 6530b8952cc13ea192f97c3a8c7fc3af8584680430f8ee58c62a9e64c48bb5dc Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d stretch-lts -B /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat --apt libsbml5-cil=5.13.0+dfsg-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d stretch-lts -B /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat --apt libsbml5-cil=5.13.0+dfsg-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp61ql2_du 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp61ql2_du 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/proc'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/proc'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/pts'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/pts'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/ptmx'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/ptmx'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/console'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/console'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/shm'] 0m1.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/shm'] 0m1.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main 0m1.5s DEBUG: Created policy-rc.d and chmodded it. 0m1.5s DEBUG: Created resolv.conf. 0m1.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp61ql2_du/tmp/scripts/ 0m1.5s INFO: Running scripts post_chroot_unpack 0m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', 'update'] 0m2.2s DUMP: Ign:1 http://deb.debian.org/debian stretch InRelease Hit:2 http://deb.debian.org/debian stretch Release Reading package lists... 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', 'update'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-yf', 'dist-upgrade'] 0m2.4s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-yf', 'dist-upgrade'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.9s DUMP: 660e5103244a20b75ca08c3f8741e16e - 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.9s INFO: Running scripts post_setup 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_dummy_users'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_dummy_users'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_forbid_home'] 0m3.6s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_forbid_home'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.6s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' '/bin/sync' -> 'true' 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_minimize'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_minimize'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_zz_backports'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_setup_zz_backports'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.6s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.10 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u1 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.25 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u1 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u1 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+b1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.10 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+b1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+b1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u12 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u12 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed login login 1:4.4-4.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed passwd passwd 1:4.4-4.1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.6s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat 0m3.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m3.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m3.9s INFO: Running scripts is_testable 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/is_testable_uninstallable'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/is_testable_uninstallable'] 0m3.9s INFO: Running scripts pre_test 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_test_exceptions'] 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_test_exceptions'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_test_root_password'] 0m3.9s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_test_root_password'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'show', '--no-all-versions', 'libsbml5-cil'] 0m4.1s DUMP: Package: libsbml5-cil Source: libsbml Version: 5.13.0+dfsg-1 Installed-Size: 10654 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libsbml-cil Depends: libbz2-1.0, libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), libxml2 (>= 2.7.4), zlib1g (>= 1:1.1.4), libmono-corlib4.5-cil (>= 4.6.1.3), libsbml5-dev Description-en: System Biology Markup Language library - CLI bindings LibSBML is a library designed to help you read, write, manipulate, translate, and validate SBML files and data streams. It is not an application itself (though it does come with many example programs), but rather a library you can embed in your own applications. . This package contains the CLI bindings of LibSBML. Description-md5: 6923ba76f814ada93ced1087327fce79 Homepage: http://www.sbml.org/ Section: cli-mono Priority: optional Filename: pool/main/libs/libsbml/libsbml5-cil_5.13.0+dfsg-1_amd64.deb Size: 2207642 MD5sum: 745ae766f51d6e67c49aa5e2ffe5a181 SHA256: 6530b8952cc13ea192f97c3a8c7fc3af8584680430f8ee58c62a9e64c48bb5dc 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'show', '--no-all-versions', 'libsbml5-cil'] 0m4.1s INFO: apt-cache knows about the following packages: libsbml5-cil 0m4.1s INFO: Running scripts pre_install 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_database-server'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_database-server'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_exceptions'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_exceptions'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_extras'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_extras'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy'] 0m4.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy', 'libsbml5-cil'] 0m4.3s DUMP: libsbml5-cil: Installed: (none) Candidate: 5.13.0+dfsg-1 Version table: 5.13.0+dfsg-1 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy', 'libsbml5-cil'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-y', 'install', 'libsbml5-cil'] 0m14.5s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: binutils libicu57 libmono-corlib4.5-cil libmono-security4.0-cil libmono-system-configuration4.0-cil libmono-system-security4.0-cil libmono-system-xml4.0-cil libmono-system4.0-cil libsbml5 libsbml5-dev libxml2 mono-4.0-gac mono-gac mono-runtime mono-runtime-common mono-runtime-sgen tzdata Suggested packages: binutils-doc libmono-i18n4.0-all libasound2 libgamin0 xdg-utils | libgnome2-0 | konqueror Recommended packages: libmono-i18n-west4.0-cil ca-certificates-mono xml-core cli-common binfmt-support The following NEW packages will be installed: binutils libicu57 libmono-corlib4.5-cil libmono-security4.0-cil libmono-system-configuration4.0-cil libmono-system-security4.0-cil libmono-system-xml4.0-cil libmono-system4.0-cil libsbml5 libsbml5-cil libsbml5-dev libxml2 mono-4.0-gac mono-gac mono-runtime mono-runtime-common mono-runtime-sgen tzdata 0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded. Need to get 24.0 MB of archives. After this operation, 122 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian stretch/main amd64 tzdata all 2020a-0+deb9u1 [278 kB] Get:2 http://deb.debian.org/debian stretch/main amd64 libicu57 amd64 57.1-6+deb9u4 [7699 kB] Get:3 http://deb.debian.org/debian stretch/main amd64 libxml2 amd64 2.9.4+dfsg1-2.2+deb9u2 [920 kB] Get:4 http://deb.debian.org/debian stretch/main amd64 binutils amd64 2.28-5 [3770 kB] Get:5 http://deb.debian.org/debian stretch/main amd64 libmono-system-xml4.0-cil all 4.6.2.7+dfsg-1 [831 kB] Get:6 http://deb.debian.org/debian stretch/main amd64 libmono-system-security4.0-cil all 4.6.2.7+dfsg-1 [73.0 kB] Get:7 http://deb.debian.org/debian stretch/main amd64 libmono-system-configuration4.0-cil all 4.6.2.7+dfsg-1 [72.2 kB] Get:8 http://deb.debian.org/debian stretch/main amd64 libmono-system4.0-cil all 4.6.2.7+dfsg-1 [726 kB] Get:9 http://deb.debian.org/debian stretch/main amd64 libmono-security4.0-cil all 4.6.2.7+dfsg-1 [246 kB] Get:10 http://deb.debian.org/debian stretch/main amd64 mono-4.0-gac all 4.6.2.7+dfsg-1 [40.2 kB] Get:11 http://deb.debian.org/debian stretch/main amd64 mono-gac all 4.6.2.7+dfsg-1 [36.0 kB] Get:12 http://deb.debian.org/debian stretch/main amd64 mono-runtime-common amd64 4.6.2.7+dfsg-1 [261 kB] Get:13 http://deb.debian.org/debian stretch/main amd64 mono-runtime-sgen amd64 4.6.2.7+dfsg-1 [1381 kB] Get:14 http://deb.debian.org/debian stretch/main amd64 mono-runtime amd64 4.6.2.7+dfsg-1 [32.0 kB] Get:15 http://deb.debian.org/debian stretch/main amd64 libmono-corlib4.5-cil all 4.6.2.7+dfsg-1 [1043 kB] Get:16 http://deb.debian.org/debian stretch/main amd64 libsbml5 amd64 5.13.0+dfsg-1 [1801 kB] Get:17 http://deb.debian.org/debian stretch/main amd64 libsbml5-dev amd64 5.13.0+dfsg-1 [2625 kB] Get:18 http://deb.debian.org/debian stretch/main amd64 libsbml5-cil amd64 5.13.0+dfsg-1 [2208 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 24.0 MB in 1s (23.7 MB/s) Selecting previously unselected package tzdata. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4411 files and directories currently installed.) Preparing to unpack .../00-tzdata_2020a-0+deb9u1_all.deb ... Unpacking tzdata (2020a-0+deb9u1) ... Selecting previously unselected package libicu57:amd64. Preparing to unpack .../01-libicu57_57.1-6+deb9u4_amd64.deb ... Unpacking libicu57:amd64 (57.1-6+deb9u4) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../02-libxml2_2.9.4+dfsg1-2.2+deb9u2_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u2) ... Selecting previously unselected package binutils. Preparing to unpack .../03-binutils_2.28-5_amd64.deb ... Unpacking binutils (2.28-5) ... Selecting previously unselected package libmono-system-xml4.0-cil. Preparing to unpack .../04-libmono-system-xml4.0-cil_4.6.2.7+dfsg-1_all.deb ... Unpacking libmono-system-xml4.0-cil (4.6.2.7+dfsg-1) ... Selecting previously unselected package libmono-system-security4.0-cil. Preparing to unpack .../05-libmono-system-security4.0-cil_4.6.2.7+dfsg-1_all.deb ... Unpacking libmono-system-security4.0-cil (4.6.2.7+dfsg-1) ... Selecting previously unselected package libmono-system-configuration4.0-cil. Preparing to unpack .../06-libmono-system-configuration4.0-cil_4.6.2.7+dfsg-1_all.deb ... Unpacking libmono-system-configuration4.0-cil (4.6.2.7+dfsg-1) ... Selecting previously unselected package libmono-system4.0-cil. Preparing to unpack .../07-libmono-system4.0-cil_4.6.2.7+dfsg-1_all.deb ... Unpacking libmono-system4.0-cil (4.6.2.7+dfsg-1) ... Selecting previously unselected package libmono-security4.0-cil. Preparing to unpack .../08-libmono-security4.0-cil_4.6.2.7+dfsg-1_all.deb ... Unpacking libmono-security4.0-cil (4.6.2.7+dfsg-1) ... Selecting previously unselected package mono-4.0-gac. Preparing to unpack .../09-mono-4.0-gac_4.6.2.7+dfsg-1_all.deb ... Unpacking mono-4.0-gac (4.6.2.7+dfsg-1) ... Selecting previously unselected package mono-gac. Preparing to unpack .../10-mono-gac_4.6.2.7+dfsg-1_all.deb ... Unpacking mono-gac (4.6.2.7+dfsg-1) ... Selecting previously unselected package mono-runtime-common. Preparing to unpack .../11-mono-runtime-common_4.6.2.7+dfsg-1_amd64.deb ... Unpacking mono-runtime-common (4.6.2.7+dfsg-1) ... Selecting previously unselected package mono-runtime-sgen. Preparing to unpack .../12-mono-runtime-sgen_4.6.2.7+dfsg-1_amd64.deb ... Unpacking mono-runtime-sgen (4.6.2.7+dfsg-1) ... Selecting previously unselected package mono-runtime. Preparing to unpack .../13-mono-runtime_4.6.2.7+dfsg-1_amd64.deb ... Unpacking mono-runtime (4.6.2.7+dfsg-1) ... Selecting previously unselected package libmono-corlib4.5-cil. Preparing to unpack .../14-libmono-corlib4.5-cil_4.6.2.7+dfsg-1_all.deb ... Unpacking libmono-corlib4.5-cil (4.6.2.7+dfsg-1) ... Selecting previously unselected package libsbml5. Preparing to unpack .../15-libsbml5_5.13.0+dfsg-1_amd64.deb ... Unpacking libsbml5 (5.13.0+dfsg-1) ... Selecting previously unselected package libsbml5-dev. Preparing to unpack .../16-libsbml5-dev_5.13.0+dfsg-1_amd64.deb ... Unpacking libsbml5-dev (5.13.0+dfsg-1) ... Selecting previously unselected package libsbml5-cil. Preparing to unpack .../17-libsbml5-cil_5.13.0+dfsg-1_amd64.deb ... Unpacking libsbml5-cil (5.13.0+dfsg-1) ... Setting up tzdata (2020a-0+deb9u1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Mar 1 01:23:19 UTC 2023. Universal Time is now: Wed Mar 1 01:23:19 UTC 2023. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libicu57:amd64 (57.1-6+deb9u4) ... Setting up libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u2) ... Setting up libsbml5 (5.13.0+dfsg-1) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... Setting up binutils (2.28-5) ... Setting up libsbml5-dev (5.13.0+dfsg-1) ... Setting up mono-runtime-sgen (4.6.2.7+dfsg-1) ... Setting up mono-runtime (4.6.2.7+dfsg-1) ... update-alternatives: using /usr/bin/mono to provide /usr/bin/cli (cli) in auto mode Setting up libmono-corlib4.5-cil (4.6.2.7+dfsg-1) ... Setting up libmono-security4.0-cil (4.6.2.7+dfsg-1) ... Setting up mono-4.0-gac (4.6.2.7+dfsg-1) ... Setting up mono-gac (4.6.2.7+dfsg-1) ... update-alternatives: using /usr/bin/gacutil to provide /usr/bin/cli-gacutil (global-assembly-cache-tool) in auto mode Setting up mono-runtime-common (4.6.2.7+dfsg-1) ... Setting up libmono-system-xml4.0-cil (4.6.2.7+dfsg-1) ... Setting up libsbml5-cil (5.13.0+dfsg-1) ... Setting up libmono-system4.0-cil (4.6.2.7+dfsg-1) ... Setting up libmono-system-configuration4.0-cil (4.6.2.7+dfsg-1) ... Setting up libmono-system-security4.0-cil (4.6.2.7+dfsg-1) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m14.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-y', 'install', 'libsbml5-cil'] 0m14.5s INFO: Running scripts post_install 0m14.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_install_exceptions'] 0m14.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_install_exceptions'] 0m14.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m14.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m14.9s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp61ql2_du to stretch-lts 0m14.9s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main deb http://security.debian.org stretch/updates main 0m14.9s INFO: Running scripts pre_distupgrade 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_exceptions'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_exceptions'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', 'update'] 0m16.1s DUMP: Get:1 http://security.debian.org stretch/updates InRelease [59.1 kB] Ign:2 http://deb.debian.org/debian stretch InRelease Hit:3 http://deb.debian.org/debian stretch Release Get:4 http://security.debian.org stretch/updates/main amd64 Packages [782 kB] Get:5 http://security.debian.org stretch/updates/main Translation-en [368 kB] Fetched 1209 kB in 0s (3269 kB/s) Reading package lists... 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', 'update'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-yf', 'dist-upgrade'] 0m19.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt debian-archive-keyring dpkg e2fslibs e2fsprogs gzip libapt-pkg5.0 libcomerr2 libgcrypt20 libicu57 liblz4-1 liblzma5 libss2 libsystemd0 libudev1 libxml2 login passwd tar tzdata zlib1g 21 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 18.5 MB of archives. After this operation, 55.3 kB of additional disk space will be used. Get:1 http://security.debian.org stretch/updates/main amd64 tar amd64 1.29b-1.1+deb9u1 [760 kB] Get:2 http://security.debian.org stretch/updates/main amd64 dpkg amd64 1.18.26 [2117 kB] Get:3 http://security.debian.org stretch/updates/main amd64 e2fslibs amd64 1.43.4-2+deb9u2 [208 kB] Get:4 http://security.debian.org stretch/updates/main amd64 e2fsprogs amd64 1.43.4-2+deb9u2 [948 kB] Get:5 http://security.debian.org stretch/updates/main amd64 gzip amd64 1.6-5+deb9u1 [114 kB] Get:6 http://security.debian.org stretch/updates/main amd64 login amd64 1:4.4-4.1+deb9u1 [790 kB] Get:7 http://security.debian.org stretch/updates/main amd64 debian-archive-keyring all 2017.5+deb9u2 [92.4 kB] Get:8 http://security.debian.org stretch/updates/main amd64 liblz4-1 amd64 0.0~r131-2+deb9u1 [33.2 kB] Get:9 http://security.debian.org stretch/updates/main amd64 liblzma5 amd64 5.2.2-1.2+deb9u1 [234 kB] Get:10 http://security.debian.org stretch/updates/main amd64 zlib1g amd64 1:1.2.8.dfsg-5+deb9u1 [87.8 kB] Get:11 http://security.debian.org stretch/updates/main amd64 libapt-pkg5.0 amd64 1.4.11 [917 kB] Get:12 http://security.debian.org stretch/updates/main amd64 apt amd64 1.4.11 [1232 kB] Get:13 http://security.debian.org stretch/updates/main amd64 libsystemd0 amd64 232-25+deb9u14 [282 kB] Get:14 http://security.debian.org stretch/updates/main amd64 libcomerr2 amd64 1.43.4-2+deb9u2 [63.8 kB] Get:15 http://security.debian.org stretch/updates/main amd64 libss2 amd64 1.43.4-2+deb9u2 [68.0 kB] Get:16 http://security.debian.org stretch/updates/main amd64 passwd amd64 1:4.4-4.1+deb9u1 [997 kB] Get:17 http://security.debian.org stretch/updates/main amd64 libudev1 amd64 232-25+deb9u14 [126 kB] Get:18 http://security.debian.org stretch/updates/main amd64 libgcrypt20 amd64 1.7.6-2+deb9u4 [523 kB] Get:19 http://security.debian.org stretch/updates/main amd64 tzdata all 2021a-0+deb9u4 [281 kB] Get:20 http://security.debian.org stretch/updates/main amd64 libicu57 amd64 57.1-6+deb9u5 [7700 kB] Get:21 http://security.debian.org stretch/updates/main amd64 libxml2 amd64 2.9.4+dfsg1-2.2+deb9u7 [920 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.5 MB in 0s (87.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../tar_1.29b-1.1+deb9u1_amd64.deb ... Unpacking tar (1.29b-1.1+deb9u1) over (1.29b-1.1) ... Setting up tar (1.29b-1.1+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../dpkg_1.18.26_amd64.deb ... Unpacking dpkg (1.18.26) over (1.18.25) ... Setting up dpkg (1.18.26) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../e2fslibs_1.43.4-2+deb9u2_amd64.deb ... Unpacking e2fslibs:amd64 (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up e2fslibs:amd64 (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.43.4-2+deb9u2_amd64.deb ... Unpacking e2fsprogs (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up e2fsprogs (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../gzip_1.6-5+deb9u1_amd64.deb ... Unpacking gzip (1.6-5+deb9u1) over (1.6-5+b1) ... Setting up gzip (1.6-5+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7254 files and directories currently installed.) Preparing to unpack .../login_1%3a4.4-4.1+deb9u1_amd64.deb ... Unpacking login (1:4.4-4.1+deb9u1) over (1:4.4-4.1) ... Setting up login (1:4.4-4.1+deb9u1) ... Installing new version of config file /etc/securetty ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7254 files and directories currently installed.) Preparing to unpack .../debian-archive-keyring_2017.5+deb9u2_all.deb ... Unpacking debian-archive-keyring (2017.5+deb9u2) over (2017.5+deb9u1) ... Setting up debian-archive-keyring (2017.5+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7257 files and directories currently installed.) Preparing to unpack .../liblz4-1_0.0~r131-2+deb9u1_amd64.deb ... Unpacking liblz4-1:amd64 (0.0~r131-2+deb9u1) over (0.0~r131-2+b1) ... Setting up liblz4-1:amd64 (0.0~r131-2+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7256 files and directories currently installed.) Preparing to unpack .../liblzma5_5.2.2-1.2+deb9u1_amd64.deb ... Unpacking liblzma5:amd64 (5.2.2-1.2+deb9u1) over (5.2.2-1.2+b1) ... Setting up liblzma5:amd64 (5.2.2-1.2+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.2.8.dfsg-5+deb9u1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.8.dfsg-5+deb9u1) over (1:1.2.8.dfsg-5) ... Setting up zlib1g:amd64 (1:1.2.8.dfsg-5+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../libapt-pkg5.0_1.4.11_amd64.deb ... Unpacking libapt-pkg5.0:amd64 (1.4.11) over (1.4.10) ... Setting up libapt-pkg5.0:amd64 (1.4.11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../archives/apt_1.4.11_amd64.deb ... Unpacking apt (1.4.11) over (1.4.10) ... Setting up apt (1.4.11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../libsystemd0_232-25+deb9u14_amd64.deb ... Unpacking libsystemd0:amd64 (232-25+deb9u14) over (232-25+deb9u12) ... Setting up libsystemd0:amd64 (232-25+deb9u14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../libcomerr2_1.43.4-2+deb9u2_amd64.deb ... Unpacking libcomerr2:amd64 (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up libcomerr2:amd64 (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../libss2_1.43.4-2+deb9u2_amd64.deb ... Unpacking libss2:amd64 (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up libss2:amd64 (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.4-4.1+deb9u1_amd64.deb ... Unpacking passwd (1:4.4-4.1+deb9u1) over (1:4.4-4.1) ... Setting up passwd (1:4.4-4.1+deb9u1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../libudev1_232-25+deb9u14_amd64.deb ... Unpacking libudev1:amd64 (232-25+deb9u14) over (232-25+deb9u12) ... Setting up libudev1:amd64 (232-25+deb9u14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.7.6-2+deb9u4_amd64.deb ... Unpacking libgcrypt20:amd64 (1.7.6-2+deb9u4) over (1.7.6-2+deb9u3) ... Setting up libgcrypt20:amd64 (1.7.6-2+deb9u4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Preparing to unpack .../tzdata_2021a-0+deb9u4_all.deb ... Unpacking tzdata (2021a-0+deb9u4) over (2020a-0+deb9u1) ... Preparing to unpack .../libicu57_57.1-6+deb9u5_amd64.deb ... Unpacking libicu57:amd64 (57.1-6+deb9u5) over (57.1-6+deb9u4) ... Preparing to unpack .../libxml2_2.9.4+dfsg1-2.2+deb9u7_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u7) over (2.9.4+dfsg1-2.2+deb9u2) ... Setting up tzdata (2021a-0+deb9u4) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Mar 1 01:23:30 UTC 2023. Universal Time is now: Wed Mar 1 01:23:30 UTC 2023. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libicu57:amd64 (57.1-6+deb9u5) ... Setting up libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u7) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-yf', 'dist-upgrade'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m20.1s DUMP: f0660a0a38f941b755664f52e8306b99 - 0m20.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m20.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'show', '--no-all-versions', 'libsbml5-cil'] 0m20.3s DUMP: Package: libsbml5-cil Source: libsbml Version: 5.13.0+dfsg-1 Installed-Size: 10654 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libsbml-cil Depends: libbz2-1.0, libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), libxml2 (>= 2.7.4), zlib1g (>= 1:1.1.4), libmono-corlib4.5-cil (>= 4.6.1.3), libsbml5-dev Description-en: System Biology Markup Language library - CLI bindings LibSBML is a library designed to help you read, write, manipulate, translate, and validate SBML files and data streams. It is not an application itself (though it does come with many example programs), but rather a library you can embed in your own applications. . This package contains the CLI bindings of LibSBML. Description-md5: 6923ba76f814ada93ced1087327fce79 Homepage: http://www.sbml.org/ Section: cli-mono Priority: optional Filename: pool/main/libs/libsbml/libsbml5-cil_5.13.0+dfsg-1_amd64.deb Size: 2207642 MD5sum: 745ae766f51d6e67c49aa5e2ffe5a181 SHA256: 6530b8952cc13ea192f97c3a8c7fc3af8584680430f8ee58c62a9e64c48bb5dc 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'show', '--no-all-versions', 'libsbml5-cil'] 0m20.3s INFO: apt-cache knows about the following packages: libsbml5-cil 0m20.3s INFO: Running scripts pre_install 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_database-server'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_database-server'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_exceptions'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_exceptions'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_extras'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_extras'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy'] 0m20.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org stretch/updates/main amd64 Packages release v=9,o=Debian,a=oldoldstable,n=stretch,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy'] 0m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy', 'libsbml5-cil'] 0m20.5s DUMP: libsbml5-cil: Installed: 5.13.0+dfsg-1 Candidate: 5.13.0+dfsg-1 Version table: *** 5.13.0+dfsg-1 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 100 /var/lib/dpkg/status 0m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy', 'libsbml5-cil'] 0m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-y', 'install', 'libsbml5-cil'] 0m20.7s DUMP: Reading package lists... Building dependency tree... Reading state information... libsbml5-cil is already the newest version (5.13.0+dfsg-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m20.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-y', 'install', 'libsbml5-cil'] 0m20.7s INFO: Running scripts post_install 0m20.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_install_exceptions'] 0m20.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_install_exceptions'] 0m20.7s INFO: Running scripts post_distupgrade 0m20.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m20.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m20.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_exceptions'] 0m20.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_exceptions'] 0m20.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m20.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m20.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m20.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m20.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_zz_backports'] 0m20.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_distupgrade_zz_backports'] 0m20.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m21.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m21.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m21.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m21.4s INFO: Running scripts pre_install 0m21.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_database-server'] 0m21.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_database-server'] 0m21.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_exceptions'] 0m21.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_exceptions'] 0m21.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_extras'] 0m21.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_extras'] 0m21.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m21.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m21.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m21.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m21.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy'] 0m21.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org stretch/updates/main amd64 Packages release v=9,o=Debian,a=oldoldstable,n=stretch,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m21.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy'] 0m21.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy', 'libsbml5-cil'] 0m21.6s DUMP: libsbml5-cil: Installed: 5.13.0+dfsg-1 Candidate: 5.13.0+dfsg-1 Version table: *** 5.13.0+dfsg-1 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 100 /var/lib/dpkg/status 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-cache', 'policy', 'libsbml5-cil'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-y', 'install', 'libsbml5-cil=5.13.0+dfsg-1'] 0m21.9s DUMP: Reading package lists... Building dependency tree... Reading state information... libsbml5-cil is already the newest version (5.13.0+dfsg-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', '-y', 'install', 'libsbml5-cil=5.13.0+dfsg-1'] 0m21.9s INFO: Running scripts post_install 0m21.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_install_exceptions'] 0m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_install_exceptions'] 0m21.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m22.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m22.6s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', '-ac', '--ignore-obsolete'] 0m23.4s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', '-ac', '--ignore-obsolete'] 0m23.4s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m23.5s DUMP: 0.15.6 0m23.5s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m23.5s INFO: Running adequate version 0.15.6 now. 0m23.5s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'libsbml5-cil'] 0m23.5s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'libsbml5-cil'] 0m23.5s INFO: Running scripts pre_remove 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m23.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m23.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m24.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m24.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m24.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m24.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m24.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m24.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_exceptions'] 0m24.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/pre_remove_exceptions'] 0m24.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m24.3s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.11 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed binutils binutils 2.28-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u2 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.26 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u2 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u2 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+deb9u1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.11 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u4 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed libicu57:amd64 libicu57 57.1-6+deb9u5 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+deb9u1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+deb9u1 install ok installed libmono-corlib4.5-cil libmono-corlib4.5-cil 4.6.2.7+dfsg-1 install ok installed libmono-security4.0-cil libmono-security4.0-cil 4.6.2.7+dfsg-1 install ok installed libmono-system-configuration4.0-cil libmono-system-configuration4.0-cil 4.6.2.7+dfsg-1 install ok installed libmono-system-security4.0-cil libmono-system-security4.0-cil 4.6.2.7+dfsg-1 install ok installed libmono-system-xml4.0-cil libmono-system-xml4.0-cil 4.6.2.7+dfsg-1 install ok installed libmono-system4.0-cil libmono-system4.0-cil 4.6.2.7+dfsg-1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libsbml5 libsbml5 5.13.0+dfsg-1 install ok installed libsbml5-cil libsbml5-cil 5.13.0+dfsg-1 install ok installed libsbml5-dev libsbml5-dev 5.13.0+dfsg-1 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u2 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u14 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u14 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed libxml2:amd64 libxml2 2.9.4+dfsg1-2.2+deb9u7 install ok installed login login 1:4.4-4.1+deb9u1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mono-4.0-gac mono-4.0-gac 4.6.2.7+dfsg-1 install ok installed mono-gac mono-gac 4.6.2.7+dfsg-1 install ok installed mono-runtime mono-runtime 4.6.2.7+dfsg-1 install ok installed mono-runtime-common mono-runtime-common 4.6.2.7+dfsg-1 install ok installed mono-runtime-sgen mono-runtime-sgen 4.6.2.7+dfsg-1 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed passwd passwd 1:4.4-4.1+deb9u1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1+deb9u1 install ok installed tzdata tzdata 2021a-0+deb9u4 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5+deb9u1 0m24.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m24.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', 'remove', 'binutils', 'libicu57:amd64', 'libmono-corlib4.5-cil', 'libmono-security4.0-cil', 'libmono-system-configuration4.0-cil', 'libmono-system-security4.0-cil', 'libmono-system-xml4.0-cil', 'libmono-system4.0-cil', 'libsbml5', 'libsbml5-dev', 'libxml2:amd64', 'mono-4.0-gac', 'mono-gac', 'mono-runtime', 'mono-runtime-common', 'mono-runtime-sgen', 'tzdata', 'libsbml5-cil'] 0m24.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: binutils libicu57 libmono-corlib4.5-cil libmono-security4.0-cil libmono-system-configuration4.0-cil libmono-system-security4.0-cil libmono-system-xml4.0-cil libmono-system4.0-cil libsbml5 libsbml5-cil libsbml5-dev libxml2 mono-4.0-gac mono-gac mono-runtime mono-runtime-common mono-runtime-sgen tzdata 0 upgraded, 0 newly installed, 18 to remove and 0 not upgraded. After this operation, 122 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7255 files and directories currently installed.) Removing libsbml5-cil (5.13.0+dfsg-1) ... Removing libsbml5-dev (5.13.0+dfsg-1) ... Removing libsbml5 (5.13.0+dfsg-1) ... Removing libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u7) ... Removing libicu57:amd64 (57.1-6+deb9u5) ... Removing libmono-system-configuration4.0-cil (4.6.2.7+dfsg-1) ... Removing libmono-system-security4.0-cil (4.6.2.7+dfsg-1) ... Removing libmono-system-xml4.0-cil (4.6.2.7+dfsg-1) ... Removing libmono-security4.0-cil (4.6.2.7+dfsg-1) ... Removing libmono-system4.0-cil (4.6.2.7+dfsg-1) ... Removing libmono-corlib4.5-cil (4.6.2.7+dfsg-1) ... Removing mono-runtime (4.6.2.7+dfsg-1) ... Removing tzdata (2021a-0+deb9u4) ... Removing mono-runtime-sgen (4.6.2.7+dfsg-1) ... Removing mono-runtime-common (4.6.2.7+dfsg-1) ... Removing mono-gac (4.6.2.7+dfsg-1) ... Removing mono-4.0-gac (4.6.2.7+dfsg-1) ... dpkg: warning: while removing mono-4.0-gac, directory '/usr/lib/mono' not empty so not removed Removing binutils (2.28-5) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m24.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', 'remove', 'binutils', 'libicu57:amd64', 'libmono-corlib4.5-cil', 'libmono-security4.0-cil', 'libmono-system-configuration4.0-cil', 'libmono-system-security4.0-cil', 'libmono-system-xml4.0-cil', 'libmono-system4.0-cil', 'libsbml5', 'libsbml5-dev', 'libxml2:amd64', 'mono-4.0-gac', 'mono-gac', 'mono-runtime', 'mono-runtime-common', 'mono-runtime-sgen', 'tzdata', 'libsbml5-cil'] 0m24.9s INFO: Running scripts post_remove 0m24.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_remove_exceptions'] 0m24.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_remove_exceptions'] 0m24.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg', '--purge', 'binutils', 'libicu57:amd64', 'libmono-corlib4.5-cil', 'libmono-security4.0-cil', 'libmono-system-configuration4.0-cil', 'libmono-system-security4.0-cil', 'libmono-system-xml4.0-cil', 'libmono-system4.0-cil', 'libsbml5', 'libsbml5-dev', 'libxml2:amd64', 'mono-4.0-gac', 'mono-gac', 'mono-runtime', 'mono-runtime-common', 'mono-runtime-sgen', 'tzdata'] 0m25.0s DUMP: dpkg: warning: ignoring request to remove binutils which isn't installed dpkg: warning: ignoring request to remove libicu57 which isn't installed dpkg: warning: ignoring request to remove libmono-corlib4.5-cil which isn't installed dpkg: warning: ignoring request to remove libmono-security4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system-configuration4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system-security4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system-xml4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system4.0-cil which isn't installed dpkg: warning: ignoring request to remove libsbml5 which isn't installed dpkg: warning: ignoring request to remove libsbml5-dev which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove mono-4.0-gac which isn't installed dpkg: warning: ignoring request to remove mono-gac which isn't installed dpkg: warning: ignoring request to remove mono-runtime which isn't installed (Reading database ... 4435 files and directories currently installed.) Purging configuration files for mono-runtime-common (4.6.2.7+dfsg-1) ... dpkg: warning: ignoring request to remove mono-runtime-sgen which isn't installed Purging configuration files for tzdata (2021a-0+deb9u4) ... 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg', '--purge', 'binutils', 'libicu57:amd64', 'libmono-corlib4.5-cil', 'libmono-security4.0-cil', 'libmono-system-configuration4.0-cil', 'libmono-system-security4.0-cil', 'libmono-system-xml4.0-cil', 'libmono-system4.0-cil', 'libsbml5', 'libsbml5-dev', 'libxml2:amd64', 'mono-4.0-gac', 'mono-gac', 'mono-runtime', 'mono-runtime-common', 'mono-runtime-sgen', 'tzdata'] 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg', '--purge', 'libsbml5-cil'] 0m25.0s DUMP: dpkg: warning: ignoring request to remove libsbml5-cil which isn't installed 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg', '--purge', 'libsbml5-cil'] 0m25.0s INFO: Running scripts post_purge 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_purge_exceptions'] 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_purge_exceptions'] 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg', '--purge', '--pending'] 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg', '--purge', '--pending'] 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg', '--remove', '--pending'] 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg', '--remove', '--pending'] 0m25.0s INFO: Running scripts post_test 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_test_exceptions'] 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'tmp/scripts/post_test_exceptions'] 0m25.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m25.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m25.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg-divert', '--list'] 0m25.3s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m25.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'dpkg-divert', '--list'] 0m25.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', 'clean'] 0m25.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp61ql2_du', 'apt-get', 'clean'] 0m25.3s DEBUG: Recording chroot state 0m25.7s INFO: Warning: Package purging left files on system: /usr/lib/mono/ owned by: libsbml5-cil, libmono-corlib4.5-cil, mono-4.0-gac, libmono-security4.0-cil, libmono-system4.0-cil, libmono-system-configuration4.0-cil, libmono-system-security4.0-cil, libmono-system-xml4.0-cil /usr/lib/mono/aot-cache/ not owned /usr/lib/mono/aot-cache/amd64/ not owned 0m26.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/shm'] 0m26.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/shm'] 0m26.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/console'] 0m26.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/console'] 0m26.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/ptmx'] 0m26.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/ptmx'] 0m26.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/pts'] 0m26.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/dev/pts'] 0m26.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/proc'] 0m26.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp61ql2_du/proc'] 0m26.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m26.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp61ql2_du'] 0m26.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp61ql2_du 0m26.3s INFO: PASS: Upgrading between Debian distributions. 0m26.3s INFO: PASS: All tests. 0m26.3s INFO: piuparts run ends. ret=0 End: 2023-03-01 01:23:37 GMT