Start: 2023-02-12 02:43:07 GMT [stretch] Package: petsc-dev Source: petsc Version: 3.7.5+dfsg1-4 Installed-Size: 30 Maintainer: Debian Science Maintainers Architecture: all Depends: libpetsc3.7-dev Suggests: libpetsc3.7.5-dbg Description: Virtual package depending on latest PETSc development package Homepage: http://www.mcs.anl.gov/petsc Description-md5: e77ffa65782a9dd9665c29d7753e1807 Tag: devel::library, role::dummy, role::metapackage Section: libdevel Priority: extra Filename: pool/main/p/petsc/petsc-dev_3.7.5+dfsg1-4_all.deb Size: 20328 MD5sum: 29671bc60cf9d33fbea0a67d4762c2bc SHA256: a08dcd27cfe936ab49820ea4d93ca3043a691f6754cc1089b225875eec1a9008 [stretch-lts] Package: petsc-dev Source: petsc Version: 3.7.5+dfsg1-4 Installed-Size: 30 Maintainer: Debian Science Maintainers Architecture: all Depends: libpetsc3.7-dev Suggests: libpetsc3.7.5-dbg Description: Virtual package depending on latest PETSc development package Homepage: http://www.mcs.anl.gov/petsc Description-md5: e77ffa65782a9dd9665c29d7753e1807 Tag: devel::library, role::dummy, role::metapackage Section: libdevel Priority: extra Filename: pool/main/p/petsc/petsc-dev_3.7.5+dfsg1-4_all.deb Size: 20328 MD5sum: 29671bc60cf9d33fbea0a67d4762c2bc SHA256: a08dcd27cfe936ab49820ea4d93ca3043a691f6754cc1089b225875eec1a9008 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d stretch-lts -B /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat --apt petsc-dev=3.7.5+dfsg1-4 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --warn-on-debsums-errors --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz -d stretch -d stretch-lts -B /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat --apt petsc-dev=3.7.5+dfsg1-4 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmptn2f8lfp 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmptn2f8lfp 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/stretch_amd64.tar.gz'] 0m1.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/proc'] 0m1.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/proc'] 0m1.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/pts'] 0m1.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/pts'] 0m1.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/ptmx'] 0m1.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/ptmx'] 0m1.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/console'] 0m1.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/console'] 0m1.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/shm'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/shm'] 0m1.6s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main 0m1.6s DEBUG: Created policy-rc.d and chmodded it. 0m1.6s DEBUG: Created resolv.conf. 0m1.6s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmptn2f8lfp/tmp/scripts/ 0m1.6s INFO: Running scripts post_chroot_unpack 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', 'update'] 0m2.7s DUMP: Ign:1 http://deb.debian.org/debian stretch InRelease Hit:2 http://deb.debian.org/debian stretch Release Reading package lists... 0m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', 'update'] 0m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-yf', 'dist-upgrade'] 0m3.0s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-yf', 'dist-upgrade'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.4s DUMP: 660e5103244a20b75ca08c3f8741e16e - 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.5s INFO: Running scripts post_setup 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_dummy_users'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_dummy_users'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_forbid_home'] 0m4.3s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_forbid_home'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.3s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' '/bin/sync' -> 'true' 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_minimize'] 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_minimize'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_zz_backports'] 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_setup_zz_backports'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.4s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.10 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u1 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.25 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u1 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u1 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+b1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.10 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u3 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+b1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+b1 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u1 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u12 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libudev1:amd64 libudev1 232-25+deb9u12 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed login login 1:4.4-4.1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed passwd passwd 1:4.4-4.1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.4s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/stretch2next/reference-chroot-metadata.dat 0m4.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m4.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m4.6s INFO: Running scripts is_testable 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/is_testable_uninstallable'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/is_testable_uninstallable'] 0m4.6s INFO: Running scripts pre_test 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_test_exceptions'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_test_exceptions'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_test_root_password'] 0m4.7s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_test_root_password'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'show', '--no-all-versions', 'petsc-dev'] 0m4.8s DUMP: Package: petsc-dev Source: petsc Version: 3.7.5+dfsg1-4 Installed-Size: 30 Maintainer: Debian Science Maintainers Architecture: all Depends: libpetsc3.7-dev Suggests: libpetsc3.7.5-dbg Description-en: Virtual package depending on latest PETSc development package PETSc is the "Portable Extensible Toolkit for Scientific Computation", a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI standard for all message-passing communication. Several sample scientific applications, as well as various papers and talks, demonstrate the features of the PETSc libraries. . This metapackage will always depend on the most recent version of petscX-dev (X=version), so if you install it then you will get upgrades automatically. Description-md5: e77ffa65782a9dd9665c29d7753e1807 Homepage: http://www.mcs.anl.gov/petsc Tag: devel::library, role::dummy, role::metapackage Section: libdevel Priority: extra Filename: pool/main/p/petsc/petsc-dev_3.7.5+dfsg1-4_all.deb Size: 20328 MD5sum: 29671bc60cf9d33fbea0a67d4762c2bc SHA256: a08dcd27cfe936ab49820ea4d93ca3043a691f6754cc1089b225875eec1a9008 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'show', '--no-all-versions', 'petsc-dev'] 0m4.8s INFO: apt-cache knows about the following packages: petsc-dev 0m4.8s INFO: Running scripts pre_install 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_database-server'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_database-server'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_exceptions'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_exceptions'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_extras'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_extras'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy'] 0m4.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy', 'petsc-dev'] 0m4.9s DUMP: petsc-dev: Installed: (none) Candidate: 3.7.5+dfsg1-4 Version table: 3.7.5+dfsg1-4 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy', 'petsc-dev'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-y', 'install', 'petsc-dev'] 0m18.1s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: binutils cpp cpp-6 gcc gcc-6 gfortran gfortran-6 libaec-dev libaec0 libamd2 libasan3 libatomic1 libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libbtf1 libc-dev-bin libc6-dev libcamd2 libcc1-0 libccolamd2 libcholmod3 libcilkrts5 libcolamd2 libcxsparse3 libexpat1 libfabric1 libffi6 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libgcc-6-dev libgfortran-6-dev libgfortran3 libgmp10 libgomp1 libhdf5-mpi-dev libhdf5-openmpi-100 libhdf5-openmpi-dev libhwloc-dev libhwloc-plugins libhwloc5 libhypre-2.11.1 libhypre-dev libibverbs-dev libibverbs1 libicu57 libisl15 libitm1 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libklu1 liblapack-dev liblapack3 libldl2 liblsan0 libltdl-dev libltdl7 libmetis5 libmpc3 libmpfr4 libmpx2 libmumps-4.10.0 libmumps-dev libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpetsc3.7-dev libpetsc3.7.5 libpetsc3.7.5-dev libpsm-infinipath1 libptscotch-5.1 libptscotch-dev libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libquadmath0 librbio2 librdmacm1 libreadline7 libscalapack-mpi-dev libscalapack-openmpi1 libscotch-5.1 libscotch-dev libspooles-dev libspooles2.2 libspqr2 libsqlite3-0 libssl-dev libssl1.1 libsuitesparse-dev libsuitesparseconfig4 libsuperlu-dev libsuperlu5 libsz2 libtsan0 libubsan0 libumfpack5 libxml2 linux-libc-dev mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common python python-minimal python2.7 python2.7-minimal readline-common zlib1g-dev Suggested packages: binutils-doc cpp-doc gcc-6-locales gcc-multilib make manpages-dev autoconf automake libtool flex bison gdb gcc-doc gcc-6-multilib gcc-6-doc libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg libasan3-dbg liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libmpx2-dbg libquadmath0-dbg gfortran-multilib gfortran-doc gfortran-6-multilib gfortran-6-doc libgfortran3-dbg libcoarrays-dev liblapack-doc-man liblapack-doc glibc-doc libfftw3-doc libhdf5-doc libhwloc-contrib-plugins libtool-doc openmpi-doc pciutils petsc-dev libpetsc3.7.5-dbg petsc3.7.5-doc libluminate-dev scalapack-doc spooles-doc libsuperlu-doc opencl-icd python-doc python-tk python2.7-doc binfmt-support readline-doc Recommended packages: manpages manpages-dev libtool tcsh | csh | c-shell ksh | mksh | pdksh | zsh libssl-doc xml-core bzip2 file xz-utils The following NEW packages will be installed: binutils cpp cpp-6 gcc gcc-6 gfortran gfortran-6 libaec-dev libaec0 libamd2 libasan3 libatomic1 libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libbtf1 libc-dev-bin libc6-dev libcamd2 libcc1-0 libccolamd2 libcholmod3 libcilkrts5 libcolamd2 libcxsparse3 libexpat1 libfabric1 libffi6 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libgcc-6-dev libgfortran-6-dev libgfortran3 libgmp10 libgomp1 libhdf5-mpi-dev libhdf5-openmpi-100 libhdf5-openmpi-dev libhwloc-dev libhwloc-plugins libhwloc5 libhypre-2.11.1 libhypre-dev libibverbs-dev libibverbs1 libicu57 libisl15 libitm1 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libklu1 liblapack-dev liblapack3 libldl2 liblsan0 libltdl-dev libltdl7 libmetis5 libmpc3 libmpfr4 libmpx2 libmumps-4.10.0 libmumps-dev libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpetsc3.7-dev libpetsc3.7.5 libpetsc3.7.5-dev libpsm-infinipath1 libptscotch-5.1 libptscotch-dev libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libquadmath0 librbio2 librdmacm1 libreadline7 libscalapack-mpi-dev libscalapack-openmpi1 libscotch-5.1 libscotch-dev libspooles-dev libspooles2.2 libspqr2 libsqlite3-0 libssl-dev libssl1.1 libsuitesparse-dev libsuitesparseconfig4 libsuperlu-dev libsuperlu5 libsz2 libtsan0 libubsan0 libumfpack5 libxml2 linux-libc-dev mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common petsc-dev python python-minimal python2.7 python2.7-minimal readline-common zlib1g-dev 0 upgraded, 125 newly installed, 0 to remove and 0 not upgraded. Need to get 93.2 MB of archives. After this operation, 417 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian stretch/main amd64 libpython2.7-minimal amd64 2.7.13-2+deb9u3 [389 kB] Get:2 http://deb.debian.org/debian stretch/main amd64 python2.7-minimal amd64 2.7.13-2+deb9u3 [1382 kB] Get:3 http://deb.debian.org/debian stretch/main amd64 python-minimal amd64 2.7.13-2 [40.5 kB] Get:4 http://deb.debian.org/debian stretch/main amd64 mime-support all 3.60 [36.7 kB] Get:5 http://deb.debian.org/debian stretch/main amd64 libexpat1 amd64 2.2.0-2+deb9u3 [83.7 kB] Get:6 http://deb.debian.org/debian stretch/main amd64 libffi6 amd64 3.2.1-6 [20.4 kB] Get:7 http://deb.debian.org/debian stretch/main amd64 readline-common all 7.0-3 [70.4 kB] Get:8 http://deb.debian.org/debian stretch/main amd64 libreadline7 amd64 7.0-3 [151 kB] Get:9 http://deb.debian.org/debian stretch/main amd64 libsqlite3-0 amd64 3.16.2-5+deb9u1 [572 kB] Get:10 http://deb.debian.org/debian stretch/main amd64 libssl1.1 amd64 1.1.0l-1~deb9u1 [1358 kB] Get:11 http://deb.debian.org/debian stretch/main amd64 libpython2.7-stdlib amd64 2.7.13-2+deb9u3 [1897 kB] Get:12 http://deb.debian.org/debian stretch/main amd64 python2.7 amd64 2.7.13-2+deb9u3 [285 kB] Get:13 http://deb.debian.org/debian stretch/main amd64 libpython-stdlib amd64 2.7.13-2 [20.0 kB] Get:14 http://deb.debian.org/debian stretch/main amd64 python amd64 2.7.13-2 [154 kB] Get:15 http://deb.debian.org/debian stretch/main amd64 libicu57 amd64 57.1-6+deb9u4 [7699 kB] Get:16 http://deb.debian.org/debian stretch/main amd64 libxml2 amd64 2.9.4+dfsg1-2.2+deb9u2 [920 kB] Get:17 http://deb.debian.org/debian stretch/main amd64 binutils amd64 2.28-5 [3770 kB] Get:18 http://deb.debian.org/debian stretch/main amd64 libgmp10 amd64 2:6.1.2+dfsg-1 [253 kB] Get:19 http://deb.debian.org/debian stretch/main amd64 libisl15 amd64 0.18-1 [564 kB] Get:20 http://deb.debian.org/debian stretch/main amd64 libmpfr4 amd64 3.1.5-1 [556 kB] Get:21 http://deb.debian.org/debian stretch/main amd64 libmpc3 amd64 1.0.3-1+b2 [39.9 kB] Get:22 http://deb.debian.org/debian stretch/main amd64 cpp-6 amd64 6.3.0-18+deb9u1 [6584 kB] Get:23 http://deb.debian.org/debian stretch/main amd64 cpp amd64 4:6.3.0-4 [18.7 kB] Get:24 http://deb.debian.org/debian stretch/main amd64 libcc1-0 amd64 6.3.0-18+deb9u1 [30.6 kB] Get:25 http://deb.debian.org/debian stretch/main amd64 libgomp1 amd64 6.3.0-18+deb9u1 [73.3 kB] Get:26 http://deb.debian.org/debian stretch/main amd64 libitm1 amd64 6.3.0-18+deb9u1 [27.3 kB] Get:27 http://deb.debian.org/debian stretch/main amd64 libatomic1 amd64 6.3.0-18+deb9u1 [8966 B] Get:28 http://deb.debian.org/debian stretch/main amd64 libasan3 amd64 6.3.0-18+deb9u1 [311 kB] Get:29 http://deb.debian.org/debian stretch/main amd64 liblsan0 amd64 6.3.0-18+deb9u1 [115 kB] Get:30 http://deb.debian.org/debian stretch/main amd64 libtsan0 amd64 6.3.0-18+deb9u1 [257 kB] Get:31 http://deb.debian.org/debian stretch/main amd64 libubsan0 amd64 6.3.0-18+deb9u1 [107 kB] Get:32 http://deb.debian.org/debian stretch/main amd64 libcilkrts5 amd64 6.3.0-18+deb9u1 [40.5 kB] Get:33 http://deb.debian.org/debian stretch/main amd64 libmpx2 amd64 6.3.0-18+deb9u1 [11.2 kB] Get:34 http://deb.debian.org/debian stretch/main amd64 libquadmath0 amd64 6.3.0-18+deb9u1 [131 kB] Get:35 http://deb.debian.org/debian stretch/main amd64 libgcc-6-dev amd64 6.3.0-18+deb9u1 [2296 kB] Get:36 http://deb.debian.org/debian stretch/main amd64 gcc-6 amd64 6.3.0-18+deb9u1 [6900 kB] Get:37 http://deb.debian.org/debian stretch/main amd64 gcc amd64 4:6.3.0-4 [5196 B] Get:38 http://deb.debian.org/debian stretch/main amd64 libgfortran3 amd64 6.3.0-18+deb9u1 [265 kB] Get:39 http://deb.debian.org/debian stretch/main amd64 libgfortran-6-dev amd64 6.3.0-18+deb9u1 [299 kB] Get:40 http://deb.debian.org/debian stretch/main amd64 libc-dev-bin amd64 2.24-11+deb9u4 [259 kB] Get:41 http://deb.debian.org/debian stretch/main amd64 linux-libc-dev amd64 4.9.228-1 [1511 kB] Get:42 http://deb.debian.org/debian stretch/main amd64 libc6-dev amd64 2.24-11+deb9u4 [2364 kB] Get:43 http://deb.debian.org/debian stretch/main amd64 gfortran-6 amd64 6.3.0-18+deb9u1 [6916 kB] Get:44 http://deb.debian.org/debian stretch/main amd64 gfortran amd64 4:6.3.0-4 [1356 B] Get:45 http://deb.debian.org/debian stretch/main amd64 libaec0 amd64 0.3.2-1 [18.5 kB] Get:46 http://deb.debian.org/debian stretch/main amd64 libsuitesparseconfig4 amd64 1:4.5.4-1 [18.8 kB] Get:47 http://deb.debian.org/debian stretch/main amd64 libamd2 amd64 1:4.5.4-1 [36.3 kB] Get:48 http://deb.debian.org/debian stretch/main amd64 libblas-common amd64 3.7.0-2 [14.2 kB] Get:49 http://deb.debian.org/debian stretch/main amd64 libblas3 amd64 3.7.0-2 [155 kB] Get:50 http://deb.debian.org/debian stretch/main amd64 libblas-dev amd64 3.7.0-2 [162 kB] Get:51 http://deb.debian.org/debian stretch/main amd64 libbtf1 amd64 1:4.5.4-1 [20.3 kB] Get:52 http://deb.debian.org/debian stretch/main amd64 libcamd2 amd64 1:4.5.4-1 [32.3 kB] Get:53 http://deb.debian.org/debian stretch/main amd64 libccolamd2 amd64 1:4.5.4-1 [34.4 kB] Get:54 http://deb.debian.org/debian stretch/main amd64 libcolamd2 amd64 1:4.5.4-1 [28.5 kB] Get:55 http://deb.debian.org/debian stretch/main amd64 liblapack3 amd64 3.7.0-2 [2141 kB] Get:56 http://deb.debian.org/debian stretch/main amd64 libmetis5 amd64 5.1.0.dfsg-5+b2 [175 kB] Get:57 http://deb.debian.org/debian stretch/main amd64 libcholmod3 amd64 1:4.5.4-1 [320 kB] Get:58 http://deb.debian.org/debian stretch/main amd64 libcxsparse3 amd64 1:4.5.4-1 [74.7 kB] Get:59 http://deb.debian.org/debian stretch/main amd64 libnl-3-200 amd64 3.2.27-2 [61.5 kB] Get:60 http://deb.debian.org/debian stretch/main amd64 libnl-route-3-200 amd64 3.2.27-2 [136 kB] Get:61 http://deb.debian.org/debian stretch/main amd64 libibverbs1 amd64 1.2.1-2 [39.3 kB] Get:62 http://deb.debian.org/debian stretch/main amd64 libpsm-infinipath1 amd64 3.3+19.g67c0807.open-3 [169 kB] Get:63 http://deb.debian.org/debian stretch/main amd64 librdmacm1 amd64 1.1.0-2 [49.4 kB] Get:64 http://deb.debian.org/debian stretch/main amd64 libfabric1 amd64 1.4.0-1 [259 kB] Get:65 http://deb.debian.org/debian stretch/main amd64 libfftw3-double3 amd64 3.3.5-3 [731 kB] Get:66 http://deb.debian.org/debian stretch/main amd64 libfftw3-long3 amd64 3.3.5-3 [314 kB] Get:67 http://deb.debian.org/debian stretch/main amd64 libfftw3-quad3 amd64 3.3.5-3 [556 kB] Get:68 http://deb.debian.org/debian stretch/main amd64 libfftw3-single3 amd64 3.3.5-3 [776 kB] Get:69 http://deb.debian.org/debian stretch/main amd64 libfftw3-bin amd64 3.3.5-3 [49.7 kB] Get:70 http://deb.debian.org/debian stretch/main amd64 libfftw3-dev amd64 3.3.5-3 [2141 kB] Get:71 http://deb.debian.org/debian stretch/main amd64 libltdl7 amd64 2.4.6-2 [389 kB] Get:72 http://deb.debian.org/debian stretch/main amd64 libnuma1 amd64 2.0.11-2.1 [33.3 kB] Get:73 http://deb.debian.org/debian stretch/main amd64 libhwloc5 amd64 1.11.5-1 [105 kB] Get:74 http://deb.debian.org/debian stretch/main amd64 libpciaccess0 amd64 0.13.4-1+b2 [50.0 kB] Get:75 http://deb.debian.org/debian stretch/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1 [36.8 kB] Get:76 http://deb.debian.org/debian stretch/main amd64 libhwloc-plugins amd64 1.11.5-1 [16.1 kB] Get:77 http://deb.debian.org/debian stretch/main amd64 libopenmpi2 amd64 2.0.2-2 [2008 kB] Get:78 http://deb.debian.org/debian stretch/main amd64 libfftw3-mpi3 amd64 3.3.5-3 [66.8 kB] Get:79 http://deb.debian.org/debian stretch/main amd64 libfftw3-mpi-dev amd64 3.3.5-3 [65.2 kB] Get:80 http://deb.debian.org/debian stretch/main amd64 libjpeg62-turbo amd64 1:1.5.1-2 [134 kB] Get:81 http://deb.debian.org/debian stretch/main amd64 libjpeg62-turbo-dev amd64 1:1.5.1-2 [210 kB] Get:82 http://deb.debian.org/debian stretch/main amd64 libjpeg-dev all 1:1.5.1-2 [56.1 kB] Get:83 http://deb.debian.org/debian stretch/main amd64 libklu1 amd64 1:4.5.4-1 [82.3 kB] Get:84 http://deb.debian.org/debian stretch/main amd64 liblapack-dev amd64 3.7.0-2 [2170 kB] Get:85 http://deb.debian.org/debian stretch/main amd64 libldl2 amd64 1:4.5.4-1 [19.7 kB] Get:86 http://deb.debian.org/debian stretch/main amd64 libltdl-dev amd64 2.4.6-2 [161 kB] Get:87 http://deb.debian.org/debian stretch/main amd64 librbio2 amd64 1:4.5.4-1 [35.5 kB] Get:88 http://deb.debian.org/debian stretch/main amd64 libspqr2 amd64 1:4.5.4-1 [77.0 kB] Get:89 http://deb.debian.org/debian stretch/main amd64 libssl-dev amd64 1.1.0l-1~deb9u1 [1594 kB] Get:90 http://deb.debian.org/debian stretch/main amd64 libumfpack5 amd64 1:4.5.4-1 [240 kB] Get:91 http://deb.debian.org/debian stretch/main amd64 libsuitesparse-dev amd64 1:4.5.4-1 [939 kB] Get:92 http://deb.debian.org/debian stretch/main amd64 libsuperlu5 amd64 5.2.1+dfsg1-2 [160 kB] Get:93 http://deb.debian.org/debian stretch/main amd64 libsuperlu-dev amd64 5.2.1+dfsg1-2 [18.0 kB] Get:94 http://deb.debian.org/debian stretch/main amd64 libsz2 amd64 0.3.2-1 [5730 B] Get:95 http://deb.debian.org/debian stretch/main amd64 zlib1g-dev amd64 1:1.2.8.dfsg-5 [205 kB] Get:96 http://deb.debian.org/debian stretch/main amd64 libaec-dev amd64 0.3.2-1 [17.4 kB] Get:97 http://deb.debian.org/debian stretch/main amd64 openmpi-common all 2.0.2-2 [149 kB] Get:98 http://deb.debian.org/debian stretch/main amd64 openmpi-bin amd64 2.0.2-2 [186 kB] Get:99 http://deb.debian.org/debian stretch/main amd64 mpi-default-bin amd64 1.8 [4050 B] Get:100 http://deb.debian.org/debian stretch/main amd64 libblacs-openmpi1 amd64 1.1-38 [55.8 kB] Get:101 http://deb.debian.org/debian stretch/main amd64 libibverbs-dev amd64 1.2.1-2 [107 kB] Get:102 http://deb.debian.org/debian stretch/main amd64 libnuma-dev amd64 2.0.11-2.1 [46.0 kB] Get:103 http://deb.debian.org/debian stretch/main amd64 libhwloc-dev amd64 1.11.5-1 [167 kB] Get:104 http://deb.debian.org/debian stretch/main amd64 libopenmpi-dev amd64 2.0.2-2 [1013 kB] Get:105 http://deb.debian.org/debian stretch/main amd64 mpi-default-dev amd64 1.8 [4846 B] Get:106 http://deb.debian.org/debian stretch/main amd64 libblacs-mpi-dev amd64 1.1-38 [50.7 kB] Get:107 http://deb.debian.org/debian stretch/main amd64 libhdf5-openmpi-100 amd64 1.10.0-patch1+docs-3+deb9u1 [1312 kB] Get:108 http://deb.debian.org/debian stretch/main amd64 libhdf5-openmpi-dev amd64 1.10.0-patch1+docs-3+deb9u1 [2369 kB] Get:109 http://deb.debian.org/debian stretch/main amd64 libhdf5-mpi-dev amd64 1.10.0-patch1+docs-3+deb9u1 [27.9 kB] Get:110 http://deb.debian.org/debian stretch/main amd64 libhypre-2.11.1 amd64 2.11.1-3 [1723 kB] Get:111 http://deb.debian.org/debian stretch/main amd64 libhypre-dev amd64 2.11.1-3 [133 kB] Get:112 http://deb.debian.org/debian stretch/main amd64 libscalapack-openmpi1 amd64 1.8.0-13 [2209 kB] Get:113 http://deb.debian.org/debian stretch/main amd64 libmumps-4.10.0 amd64 4.10.0.dfsg-4+b2 [916 kB] Get:114 http://deb.debian.org/debian stretch/main amd64 libscalapack-mpi-dev amd64 1.8.0-13 [2143 kB] Get:115 http://deb.debian.org/debian stretch/main amd64 libmumps-dev amd64 4.10.0.dfsg-4+b2 [834 kB] Get:116 http://deb.debian.org/debian stretch/main amd64 libscotch-5.1 amd64 5.1.12b.dfsg-2.1 [304 kB] Get:117 http://deb.debian.org/debian stretch/main amd64 libptscotch-5.1 amd64 5.1.12b.dfsg-2.1 [526 kB] Get:118 http://deb.debian.org/debian stretch/main amd64 libpetsc3.7.5 amd64 3.7.5+dfsg1-4+b1 [3944 kB] Get:119 http://deb.debian.org/debian stretch/main amd64 libspooles2.2 amd64 2.2-12+b1 [457 kB] Get:120 http://deb.debian.org/debian stretch/main amd64 libspooles-dev amd64 2.2-12+b1 [572 kB] Get:121 http://deb.debian.org/debian stretch/main amd64 libscotch-dev amd64 5.1.12b.dfsg-2.1 [1154 kB] Get:122 http://deb.debian.org/debian stretch/main amd64 libptscotch-dev amd64 5.1.12b.dfsg-2.1 [3083 kB] Get:123 http://deb.debian.org/debian stretch/main amd64 libpetsc3.7.5-dev amd64 3.7.5+dfsg1-4+b1 [3416 kB] Get:124 http://deb.debian.org/debian stretch/main amd64 libpetsc3.7-dev amd64 3.7.5+dfsg1-4+b1 [23.9 kB] Get:125 http://deb.debian.org/debian stretch/main amd64 petsc-dev all 3.7.5+dfsg1-4 [20.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 93.2 MB in 0s (108 MB/s) Selecting previously unselected package libpython2.7-minimal:amd64. 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Unpacking libhdf5-mpi-dev (1.10.0-patch1+docs-3+deb9u1) ... Selecting previously unselected package libhypre-2.11.1:amd64. Preparing to unpack .../096-libhypre-2.11.1_2.11.1-3_amd64.deb ... Unpacking libhypre-2.11.1:amd64 (2.11.1-3) ... Selecting previously unselected package libhypre-dev:amd64. Preparing to unpack .../097-libhypre-dev_2.11.1-3_amd64.deb ... Unpacking libhypre-dev:amd64 (2.11.1-3) ... Selecting previously unselected package libscalapack-openmpi1. Preparing to unpack .../098-libscalapack-openmpi1_1.8.0-13_amd64.deb ... Unpacking libscalapack-openmpi1 (1.8.0-13) ... Selecting previously unselected package libmumps-4.10.0. Preparing to unpack .../099-libmumps-4.10.0_4.10.0.dfsg-4+b2_amd64.deb ... Unpacking libmumps-4.10.0 (4.10.0.dfsg-4+b2) ... Selecting previously unselected package libscalapack-mpi-dev. Preparing to unpack .../100-libscalapack-mpi-dev_1.8.0-13_amd64.deb ... Unpacking libscalapack-mpi-dev (1.8.0-13) ... Selecting previously unselected package libmumps-dev. Preparing to unpack .../101-libmumps-dev_4.10.0.dfsg-4+b2_amd64.deb ... Unpacking libmumps-dev (4.10.0.dfsg-4+b2) ... Selecting previously unselected package libscotch-5.1. Preparing to unpack .../102-libscotch-5.1_5.1.12b.dfsg-2.1_amd64.deb ... Unpacking libscotch-5.1 (5.1.12b.dfsg-2.1) ... Selecting previously unselected package libptscotch-5.1. Preparing to unpack .../103-libptscotch-5.1_5.1.12b.dfsg-2.1_amd64.deb ... Unpacking libptscotch-5.1 (5.1.12b.dfsg-2.1) ... Selecting previously unselected package libpetsc3.7.5:amd64. Preparing to unpack .../104-libpetsc3.7.5_3.7.5+dfsg1-4+b1_amd64.deb ... Unpacking libpetsc3.7.5:amd64 (3.7.5+dfsg1-4+b1) ... Selecting previously unselected package libspooles2.2:amd64. Preparing to unpack .../105-libspooles2.2_2.2-12+b1_amd64.deb ... Unpacking libspooles2.2:amd64 (2.2-12+b1) ... Selecting previously unselected package libspooles-dev:amd64. Preparing to unpack .../106-libspooles-dev_2.2-12+b1_amd64.deb ... Unpacking libspooles-dev:amd64 (2.2-12+b1) ... Selecting previously unselected package libscotch-dev. Preparing to unpack .../107-libscotch-dev_5.1.12b.dfsg-2.1_amd64.deb ... Unpacking libscotch-dev (5.1.12b.dfsg-2.1) ... Selecting previously unselected package libptscotch-dev. Preparing to unpack .../108-libptscotch-dev_5.1.12b.dfsg-2.1_amd64.deb ... Unpacking libptscotch-dev (5.1.12b.dfsg-2.1) ... Selecting previously unselected package libpetsc3.7.5-dev:amd64. Preparing to unpack .../109-libpetsc3.7.5-dev_3.7.5+dfsg1-4+b1_amd64.deb ... Unpacking libpetsc3.7.5-dev:amd64 (3.7.5+dfsg1-4+b1) ... Selecting previously unselected package libpetsc3.7-dev:amd64. Preparing to unpack .../110-libpetsc3.7-dev_3.7.5+dfsg1-4+b1_amd64.deb ... Unpacking libpetsc3.7-dev:amd64 (3.7.5+dfsg1-4+b1) ... Selecting previously unselected package petsc-dev. Preparing to unpack .../111-petsc-dev_3.7.5+dfsg1-4_all.deb ... Unpacking petsc-dev (3.7.5+dfsg1-4) ... Setting up libquadmath0:amd64 (6.3.0-18+deb9u1) ... Setting up libgomp1:amd64 (6.3.0-18+deb9u1) ... Setting up libatomic1:amd64 (6.3.0-18+deb9u1) ... Setting up readline-common (7.0-3) ... Setting up libaec0:amd64 (0.3.2-1) ... Setting up libexpat1:amd64 (2.2.0-2+deb9u3) ... Setting up libcc1-0:amd64 (6.3.0-18+deb9u1) ... Setting up libasan3:amd64 (6.3.0-18+deb9u1) ... Setting up libjpeg62-turbo:amd64 (1:1.5.1-2) ... Setting up mime-support (3.60) ... Setting up libcilkrts5:amd64 (6.3.0-18+deb9u1) ... Setting up libreadline7:amd64 (7.0-3) ... Setting up libblas-common (3.7.0-2) ... Setting up libnuma1:amd64 (2.0.11-2.1) ... Setting up libubsan0:amd64 (6.3.0-18+deb9u1) ... Setting up libtsan0:amd64 (6.3.0-18+deb9u1) ... Setting up libgfortran3:amd64 (6.3.0-18+deb9u1) ... Setting up linux-libc-dev:amd64 (4.9.228-1) ... Setting up libsuitesparseconfig4:amd64 (1:4.5.4-1) ... Setting up libfftw3-double3:amd64 (3.3.5-3) ... Setting up libicu57:amd64 (57.1-6+deb9u4) ... Setting up libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u2) ... Setting up liblsan0:amd64 (6.3.0-18+deb9u1) ... Setting up libpsm-infinipath1 (3.3+19.g67c0807.open-3) ... Setting up libfftw3-quad3:amd64 (3.3.5-3) ... Setting up libamd2:amd64 (1:4.5.4-1) ... Setting up libmpx2:amd64 (6.3.0-18+deb9u1) ... Setting up libgmp10:amd64 (2:6.1.2+dfsg-1) ... Setting up libblas3 (3.7.0-2) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up openmpi-common (2.0.2-2) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... Setting up libssl1.1:amd64 (1.1.0l-1~deb9u1) ... Setting up libmetis5:amd64 (5.1.0.dfsg-5+b2) ... Setting up libltdl7:amd64 (2.4.6-2) ... Setting up libsqlite3-0:amd64 (3.16.2-5+deb9u1) ... Setting up libcolamd2:amd64 (1:4.5.4-1) ... Setting up libmpfr4:amd64 (3.1.5-1) ... Setting up libpciaccess0:amd64 (0.13.4-1+b2) ... Setting up libccolamd2:amd64 (1:4.5.4-1) ... Setting up libfftw3-single3:amd64 (3.3.5-3) ... Setting up libmpc3:amd64 (1.0.3-1+b2) ... Setting up binutils (2.28-5) ... Setting up libffi6:amd64 (3.2.1-6) ... Setting up libc-dev-bin (2.24-11+deb9u4) ... Setting up ocl-icd-libopencl1:amd64 (2.2.11-1) ... Setting up libnl-3-200:amd64 (3.2.27-2) ... Setting up libfftw3-long3:amd64 (3.3.5-3) ... Setting up libc6-dev:amd64 (2.24-11+deb9u4) ... Setting up libitm1:amd64 (6.3.0-18+deb9u1) ... Setting up libpython2.7-stdlib:amd64 (2.7.13-2+deb9u3) ... Setting up libsz2:amd64 (0.3.2-1) ... Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-5) ... Setting up libbtf1:amd64 (1:4.5.4-1) ... Setting up libldl2:amd64 (1:4.5.4-1) ... Setting up libcxsparse3:amd64 (1:4.5.4-1) ... Setting up libfftw3-bin (3.3.5-3) ... Setting up libgcc-6-dev:amd64 (6.3.0-18+deb9u1) ... Setting up libltdl-dev:amd64 (2.4.6-2) ... Setting up libssl-dev:amd64 (1.1.0l-1~deb9u1) ... Setting up liblapack3 (3.7.0-2) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up librbio2:amd64 (1:4.5.4-1) ... Setting up libcamd2:amd64 (1:4.5.4-1) ... Setting up libgfortran-6-dev:amd64 (6.3.0-18+deb9u1) ... Setting up libaec-dev:amd64 (0.3.2-1) ... Setting up libklu1:amd64 (1:4.5.4-1) ... Setting up python2.7 (2.7.13-2+deb9u3) ... Setting up libnl-route-3-200:amd64 (3.2.27-2) ... Setting up libsuperlu5:amd64 (5.2.1+dfsg1-2) ... Setting up libhwloc5:amd64 (1.11.5-1) ... Setting up libcholmod3:amd64 (1:4.5.4-1) ... Setting up libpython-stdlib:amd64 (2.7.13-2) ... Setting up libhwloc-plugins (1.11.5-1) ... Setting up libisl15:amd64 (0.18-1) ... Setting up libfftw3-dev:amd64 (3.3.5-3) ... Setting up cpp-6 (6.3.0-18+deb9u1) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.5.1-2) ... Setting up libnuma-dev:amd64 (2.0.11-2.1) ... Setting up python (2.7.13-2) ... Setting up libspqr2:amd64 (1:4.5.4-1) ... Setting up libibverbs1 (1.2.1-2) ... Setting up cpp (4:6.3.0-4) ... Setting up libhwloc-dev:amd64 (1.11.5-1) ... Setting up libumfpack5:amd64 (1:4.5.4-1) ... Setting up librdmacm1 (1.1.0-2) ... Setting up gcc-6 (6.3.0-18+deb9u1) ... Setting up libjpeg-dev (1:1.5.1-2) ... Setting up libibverbs-dev (1.2.1-2) ... Setting up gfortran-6 (6.3.0-18+deb9u1) ... Setting up libfabric1 (1.4.0-1) ... Setting up gcc (4:6.3.0-4) ... Setting up libopenmpi2:amd64 (2.0.2-2) ... Setting up gfortran (4:6.3.0-4) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libhdf5-openmpi-100:amd64 (1.10.0-patch1+docs-3+deb9u1) ... Setting up libscotch-5.1 (5.1.12b.dfsg-2.1) ... Setting up libblas-dev (3.7.0-2) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libhypre-2.11.1:amd64 (2.11.1-3) ... Setting up libopenmpi-dev (2.0.2-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up libfftw3-mpi3:amd64 (3.3.5-3) ... Setting up libspooles2.2:amd64 (2.2-12+b1) ... Setting up openmpi-bin (2.0.2-2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode Setting up mpi-default-dev (1.8) ... Setting up libptscotch-5.1 (5.1.12b.dfsg-2.1) ... Setting up libhdf5-openmpi-dev (1.10.0-patch1+docs-3+deb9u1) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libscotch-dev (5.1.12b.dfsg-2.1) ... Setting up libsuperlu-dev:amd64 (5.2.1+dfsg1-2) ... Setting up libspooles-dev:amd64 (2.2-12+b1) ... Setting up mpi-default-bin (1.8) ... Setting up liblapack-dev (3.7.0-2) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libfftw3-mpi-dev:amd64 (3.3.5-3) ... Setting up libptscotch-dev (5.1.12b.dfsg-2.1) ... Setting up libhypre-dev:amd64 (2.11.1-3) ... Setting up libblacs-openmpi1 (1.1-38) ... Setting up libhdf5-mpi-dev (1.10.0-patch1+docs-3+deb9u1) ... Setting up libsuitesparse-dev:amd64 (1:4.5.4-1) ... Setting up libblacs-mpi-dev (1.1-38) ... Setting up libscalapack-openmpi1 (1.8.0-13) ... Setting up libscalapack-mpi-dev (1.8.0-13) ... Setting up libmumps-4.10.0 (4.10.0.dfsg-4+b2) ... Setting up libpetsc3.7.5:amd64 (3.7.5+dfsg1-4+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.7.5 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.7 (libpetsc.so.3.7) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.7.5 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.7 (libpetsc_real.so.3.7) in auto mode Setting up libmumps-dev (4.10.0.dfsg-4+b2) ... Setting up libpetsc3.7.5-dev:amd64 (3.7.5+dfsg1-4+b1) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/3.7.5/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.7.5 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/3.7.5/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.7 (petsc3.7) in auto mode update-alternatives: using /usr/lib/petscdir/3.7.5/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.7-real (petsc3.7-real) in auto mode Setting up libpetsc3.7-dev:amd64 (3.7.5+dfsg1-4+b1) ... Setting up petsc-dev (3.7.5+dfsg1-4) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-y', 'install', 'petsc-dev'] 0m18.1s INFO: Running scripts post_install 0m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_install_exceptions'] 0m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_install_exceptions'] 0m18.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m18.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m18.6s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmptn2f8lfp to stretch-lts 0m18.6s DEBUG: sources.list: deb http://deb.debian.org/debian/ stretch main deb http://security.debian.org stretch/updates main 0m18.6s INFO: Running scripts pre_distupgrade 0m18.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_exceptions'] 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_exceptions'] 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', 'update'] 0m20.1s DUMP: Ign:1 http://deb.debian.org/debian stretch InRelease Get:2 http://security.debian.org stretch/updates InRelease [59.1 kB] Hit:3 http://deb.debian.org/debian stretch Release Get:4 http://security.debian.org stretch/updates/main amd64 Packages [782 kB] Get:5 http://security.debian.org stretch/updates/main Translation-en [368 kB] Fetched 1209 kB in 0s (3351 kB/s) Reading package lists... 0m20.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', 'update'] 0m20.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-yf', 'dist-upgrade'] 0m27.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt debian-archive-keyring dpkg e2fslibs e2fsprogs gzip libapt-pkg5.0 libcomerr2 libexpat1 libgcrypt20 libgmp10 libicu57 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev liblz4-1 liblzma5 libpython2.7-minimal libpython2.7-stdlib libsqlite3-0 libss2 libssl-dev libssl1.1 libsystemd0 libudev1 libxml2 linux-libc-dev login passwd python2.7 python2.7-minimal tar zlib1g zlib1g-dev 34 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 28.3 MB of archives. After this operation, 289 kB of additional disk space will be used. Get:1 http://security.debian.org stretch/updates/main amd64 tar amd64 1.29b-1.1+deb9u1 [760 kB] Get:2 http://security.debian.org stretch/updates/main amd64 dpkg amd64 1.18.26 [2117 kB] Get:3 http://security.debian.org stretch/updates/main amd64 e2fslibs amd64 1.43.4-2+deb9u2 [208 kB] Get:4 http://security.debian.org stretch/updates/main amd64 e2fsprogs amd64 1.43.4-2+deb9u2 [948 kB] Get:5 http://security.debian.org stretch/updates/main amd64 gzip amd64 1.6-5+deb9u1 [114 kB] Get:6 http://security.debian.org stretch/updates/main amd64 login amd64 1:4.4-4.1+deb9u1 [790 kB] Get:7 http://security.debian.org stretch/updates/main amd64 debian-archive-keyring all 2017.5+deb9u2 [92.4 kB] Get:8 http://security.debian.org stretch/updates/main amd64 liblz4-1 amd64 0.0~r131-2+deb9u1 [33.2 kB] Get:9 http://security.debian.org stretch/updates/main amd64 liblzma5 amd64 5.2.2-1.2+deb9u1 [234 kB] Get:10 http://security.debian.org stretch/updates/main amd64 zlib1g-dev amd64 1:1.2.8.dfsg-5+deb9u1 [205 kB] Get:11 http://security.debian.org stretch/updates/main amd64 zlib1g amd64 1:1.2.8.dfsg-5+deb9u1 [87.8 kB] Get:12 http://security.debian.org stretch/updates/main amd64 libapt-pkg5.0 amd64 1.4.11 [917 kB] Get:13 http://security.debian.org stretch/updates/main amd64 apt amd64 1.4.11 [1232 kB] Get:14 http://security.debian.org stretch/updates/main amd64 libsystemd0 amd64 232-25+deb9u14 [282 kB] Get:15 http://security.debian.org stretch/updates/main amd64 python2.7 amd64 2.7.13-2+deb9u6 [286 kB] Get:16 http://security.debian.org stretch/updates/main amd64 libexpat1 amd64 2.2.0-2+deb9u5 [84.7 kB] Get:17 http://security.debian.org stretch/updates/main amd64 libsqlite3-0 amd64 3.16.2-5+deb9u3 [574 kB] Get:18 http://security.debian.org stretch/updates/main amd64 libssl-dev amd64 1.1.0l-1~deb9u6 [1595 kB] Get:19 http://security.debian.org stretch/updates/main amd64 libssl1.1 amd64 1.1.0l-1~deb9u6 [1360 kB] Get:20 http://security.debian.org stretch/updates/main amd64 libpython2.7-stdlib amd64 2.7.13-2+deb9u6 [1898 kB] Get:21 http://security.debian.org stretch/updates/main amd64 python2.7-minimal amd64 2.7.13-2+deb9u6 [1382 kB] Get:22 http://security.debian.org stretch/updates/main amd64 libpython2.7-minimal amd64 2.7.13-2+deb9u6 [390 kB] Get:23 http://security.debian.org stretch/updates/main amd64 libcomerr2 amd64 1.43.4-2+deb9u2 [63.8 kB] Get:24 http://security.debian.org stretch/updates/main amd64 libss2 amd64 1.43.4-2+deb9u2 [68.0 kB] Get:25 http://security.debian.org stretch/updates/main amd64 passwd amd64 1:4.4-4.1+deb9u1 [997 kB] Get:26 http://security.debian.org stretch/updates/main amd64 libudev1 amd64 232-25+deb9u14 [126 kB] Get:27 http://security.debian.org stretch/updates/main amd64 libgcrypt20 amd64 1.7.6-2+deb9u4 [523 kB] Get:28 http://security.debian.org stretch/updates/main amd64 libicu57 amd64 57.1-6+deb9u5 [7700 kB] Get:29 http://security.debian.org stretch/updates/main amd64 libxml2 amd64 2.9.4+dfsg1-2.2+deb9u7 [920 kB] Get:30 http://security.debian.org stretch/updates/main amd64 libgmp10 amd64 2:6.1.2+dfsg-1+deb9u1 [253 kB] Get:31 http://security.debian.org stretch/updates/main amd64 libjpeg62-turbo-dev amd64 1:1.5.1-2+deb9u2 [210 kB] Get:32 http://security.debian.org stretch/updates/main amd64 libjpeg62-turbo amd64 1:1.5.1-2+deb9u2 [134 kB] Get:33 http://security.debian.org stretch/updates/main amd64 libjpeg-dev all 1:1.5.1-2+deb9u2 [56.6 kB] Get:34 http://security.debian.org stretch/updates/main amd64 linux-libc-dev amd64 4.9.320-2 [1633 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 28.3 MB in 0s (63.8 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10441 files and directories currently installed.) Preparing to unpack .../tar_1.29b-1.1+deb9u1_amd64.deb ... Unpacking tar (1.29b-1.1+deb9u1) over (1.29b-1.1) ... Setting up tar (1.29b-1.1+deb9u1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10441 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.43.4-2+deb9u2_amd64.deb ... Unpacking e2fsprogs (1.43.4-2+deb9u2) over (1.43.4-2+deb9u1) ... Setting up e2fsprogs (1.43.4-2+deb9u2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10441 files and directories currently installed.) Preparing to unpack .../gzip_1.6-5+deb9u1_amd64.deb ... Unpacking gzip (1.6-5+deb9u1) over (1.6-5+b1) ... Setting up gzip (1.6-5+deb9u1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10441 files and directories currently installed.) Preparing to unpack .../libapt-pkg5.0_1.4.11_amd64.deb ... Unpacking libapt-pkg5.0:amd64 (1.4.11) over (1.4.10) ... Setting up libapt-pkg5.0:amd64 (1.4.11) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10442 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.7.6-2+deb9u4_amd64.deb ... Unpacking libgcrypt20:amd64 (1.7.6-2+deb9u4) over (1.7.6-2+deb9u3) ... Setting up libgcrypt20:amd64 (1.7.6-2+deb9u4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10442 files and directories currently installed.) Preparing to unpack .../0-libicu57_57.1-6+deb9u5_amd64.deb ... Unpacking libicu57:amd64 (57.1-6+deb9u5) over (57.1-6+deb9u4) ... Preparing to unpack .../1-libxml2_2.9.4+dfsg1-2.2+deb9u7_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u7) over (2.9.4+dfsg1-2.2+deb9u2) ... Preparing to unpack .../2-libgmp10_2%3a6.1.2+dfsg-1+deb9u1_amd64.deb ... Unpacking libgmp10:amd64 (2:6.1.2+dfsg-1+deb9u1) over (2:6.1.2+dfsg-1) ... Preparing to unpack .../3-libjpeg62-turbo-dev_1%3a1.5.1-2+deb9u2_amd64.deb ... Unpacking libjpeg62-turbo-dev:amd64 (1:1.5.1-2+deb9u2) over (1:1.5.1-2) ... Preparing to unpack .../4-libjpeg62-turbo_1%3a1.5.1-2+deb9u2_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:1.5.1-2+deb9u2) over (1:1.5.1-2) ... Preparing to unpack .../5-libjpeg-dev_1%3a1.5.1-2+deb9u2_all.deb ... Unpacking libjpeg-dev (1:1.5.1-2+deb9u2) over (1:1.5.1-2) ... Preparing to unpack .../6-linux-libc-dev_4.9.320-2_amd64.deb ... Unpacking linux-libc-dev:amd64 (4.9.320-2) over (4.9.228-1) ... Setting up libexpat1:amd64 (2.2.0-2+deb9u5) ... Setting up libjpeg62-turbo:amd64 (1:1.5.1-2+deb9u2) ... Processing triggers for mime-support (3.60) ... Setting up linux-libc-dev:amd64 (4.9.320-2) ... Setting up libicu57:amd64 (57.1-6+deb9u5) ... Setting up libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u7) ... Setting up libgmp10:amd64 (2:6.1.2+dfsg-1+deb9u1) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... Setting up libssl1.1:amd64 (1.1.0l-1~deb9u6) ... Setting up libsqlite3-0:amd64 (3.16.2-5+deb9u3) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.5.1-2+deb9u2) ... Setting up libpython2.7-minimal:amd64 (2.7.13-2+deb9u6) ... Setting up libpython2.7-stdlib:amd64 (2.7.13-2+deb9u6) ... Setting up python2.7-minimal (2.7.13-2+deb9u6) ... Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-5+deb9u1) ... Setting up libssl-dev:amd64 (1.1.0l-1~deb9u6) ... Setting up python2.7 (2.7.13-2+deb9u6) ... Setting up libjpeg-dev (1:1.5.1-2+deb9u2) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m27.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-yf', 'dist-upgrade'] 0m27.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m28.1s DUMP: f0660a0a38f941b755664f52e8306b99 - 0m28.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m28.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'show', '--no-all-versions', 'petsc-dev'] 0m28.3s DUMP: Package: petsc-dev Source: petsc Version: 3.7.5+dfsg1-4 Installed-Size: 30 Maintainer: Debian Science Maintainers Architecture: all Depends: libpetsc3.7-dev Suggests: libpetsc3.7.5-dbg Description-en: Virtual package depending on latest PETSc development package PETSc is the "Portable Extensible Toolkit for Scientific Computation", a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI standard for all message-passing communication. Several sample scientific applications, as well as various papers and talks, demonstrate the features of the PETSc libraries. . This metapackage will always depend on the most recent version of petscX-dev (X=version), so if you install it then you will get upgrades automatically. Description-md5: e77ffa65782a9dd9665c29d7753e1807 Homepage: http://www.mcs.anl.gov/petsc Tag: devel::library, role::dummy, role::metapackage Section: libdevel Priority: extra Filename: pool/main/p/petsc/petsc-dev_3.7.5+dfsg1-4_all.deb Size: 20328 MD5sum: 29671bc60cf9d33fbea0a67d4762c2bc SHA256: a08dcd27cfe936ab49820ea4d93ca3043a691f6754cc1089b225875eec1a9008 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'show', '--no-all-versions', 'petsc-dev'] 0m28.3s INFO: apt-cache knows about the following packages: petsc-dev 0m28.3s INFO: Running scripts pre_install 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_database-server'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_database-server'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_exceptions'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_exceptions'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_extras'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_extras'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy'] 0m28.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org stretch/updates/main amd64 Packages release v=9,o=Debian,a=oldoldstable,n=stretch,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy'] 0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy', 'petsc-dev'] 0m28.4s DUMP: petsc-dev: Installed: 3.7.5+dfsg1-4 Candidate: 3.7.5+dfsg1-4 Version table: *** 3.7.5+dfsg1-4 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 100 /var/lib/dpkg/status 0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy', 'petsc-dev'] 0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-y', 'install', 'petsc-dev'] 0m28.7s DUMP: Reading package lists... Building dependency tree... Reading state information... petsc-dev is already the newest version (3.7.5+dfsg1-4). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m28.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-y', 'install', 'petsc-dev'] 0m28.7s INFO: Running scripts post_install 0m28.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_install_exceptions'] 0m28.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_install_exceptions'] 0m28.7s INFO: Running scripts post_distupgrade 0m28.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m28.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m28.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_exceptions'] 0m28.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_exceptions'] 0m28.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m28.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m28.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m28.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m28.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_zz_backports'] 0m28.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_distupgrade_zz_backports'] 0m28.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m29.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m29.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m29.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m29.7s INFO: Running scripts pre_install 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_database-server'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_database-server'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_exceptions'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_exceptions'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_extras'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_extras'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy'] 0m29.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org stretch/updates/main amd64 Packages release v=9,o=Debian,a=oldoldstable,n=stretch,l=Debian-Security,c=main,b=amd64 origin security.debian.org 500 http://deb.debian.org/debian stretch/main amd64 Packages release v=9.13,o=Debian,a=oldoldstable,n=stretch,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m29.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy'] 0m29.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy', 'petsc-dev'] 0m29.9s DUMP: petsc-dev: Installed: 3.7.5+dfsg1-4 Candidate: 3.7.5+dfsg1-4 Version table: *** 3.7.5+dfsg1-4 500 500 http://deb.debian.org/debian stretch/main amd64 Packages 100 /var/lib/dpkg/status 0m29.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-cache', 'policy', 'petsc-dev'] 0m29.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-y', 'install', 'petsc-dev=3.7.5+dfsg1-4'] 0m30.2s DUMP: Reading package lists... Building dependency tree... Reading state information... petsc-dev is already the newest version (3.7.5+dfsg1-4). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m30.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', '-y', 'install', 'petsc-dev=3.7.5+dfsg1-4'] 0m30.2s INFO: Running scripts post_install 0m30.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_install_exceptions'] 0m30.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_install_exceptions'] 0m30.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m30.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m31.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', '-ac', '--ignore-obsolete'] 0m33.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', '-ac', '--ignore-obsolete'] 0m33.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m33.1s DUMP: 0.15.6 0m33.1s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m33.1s INFO: Running adequate version 0.15.6 now. 0m33.1s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'petsc-dev'] 0m33.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'petsc-dev'] 0m33.1s INFO: Running scripts pre_remove 0m33.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m33.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m33.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m33.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m33.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m36.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m36.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m36.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m36.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m36.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m36.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_exceptions'] 0m37.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/pre_remove_exceptions'] 0m37.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m37.0s DUMP: install ok installed adduser adduser 3.115 install ok installed apt apt 1.4.11 install ok installed base-files base-files 9.9+deb9u13 install ok installed base-passwd base-passwd 3.5.43 install ok installed bash bash 4.4-5 install ok installed binutils binutils 2.28-5 install ok installed bsdutils bsdutils 1:2.29.2-1+deb9u1 install ok installed coreutils coreutils 8.26-3 install ok installed cpp cpp 4:6.3.0-4 install ok installed cpp-6 cpp-6 6.3.0-18+deb9u1 install ok installed dash dash 0.5.8-2.4 install ok installed debconf debconf 1.5.61 install ok installed debian-archive-keyring debian-archive-keyring 2017.5+deb9u2 install ok installed debianutils debianutils 4.8.1.1 install ok installed diffutils diffutils 1:3.5-3 install ok installed dpkg dpkg 1.18.26 install ok installed e2fslibs:amd64 e2fslibs 1.43.4-2+deb9u2 install ok installed e2fsprogs e2fsprogs 1.43.4-2+deb9u2 install ok installed findutils findutils 4.6.0+git+20161106-2 install ok installed gcc gcc 4:6.3.0-4 install ok installed gcc-6 gcc-6 6.3.0-18+deb9u1 install ok installed gcc-6-base:amd64 gcc-6-base 6.3.0-18+deb9u1 install ok installed gfortran gfortran 4:6.3.0-4 install ok installed gfortran-6 gfortran-6 6.3.0-18+deb9u1 install ok installed gpgv gpgv 2.1.18-8~deb9u4 install ok installed grep grep 2.27-2 install ok installed gzip gzip 1.6-5+deb9u1 install ok installed hostname hostname 3.18+b1 install ok installed init-system-helpers init-system-helpers 1.48 install ok installed libacl1:amd64 libacl1 2.2.52-3+b1 install ok installed libaec-dev:amd64 libaec-dev 0.3.2-1 install ok installed libaec0:amd64 libaec0 0.3.2-1 install ok installed libamd2:amd64 libamd2 1:4.5.4-1 install ok installed libapt-pkg5.0:amd64 libapt-pkg5.0 1.4.11 install ok installed libasan3:amd64 libasan3 6.3.0-18+deb9u1 install ok installed libatomic1:amd64 libatomic1 6.3.0-18+deb9u1 install ok installed libattr1:amd64 libattr1 1:2.4.47-2+b2 install ok installed libaudit-common libaudit-common 1:2.6.7-2 install ok installed libaudit1:amd64 libaudit1 1:2.6.7-2 install ok installed libblacs-mpi-dev libblacs-mpi-dev 1.1-38 install ok installed libblacs-openmpi1 libblacs-openmpi1 1.1-38 install ok installed libblas-common libblas-common 3.7.0-2 install ok installed libblas-dev libblas-dev 3.7.0-2 install ok installed libblas3 libblas3 3.7.0-2 install ok installed libblkid1:amd64 libblkid1 2.29.2-1+deb9u1 install ok installed libbtf1:amd64 libbtf1 1:4.5.4-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-8.1 install ok installed libc-bin libc-bin 2.24-11+deb9u4 install ok installed libc-dev-bin libc-dev-bin 2.24-11+deb9u4 install ok installed libc6:amd64 libc6 2.24-11+deb9u4 install ok installed libc6-dev:amd64 libc6-dev 2.24-11+deb9u4 install ok installed libcamd2:amd64 libcamd2 1:4.5.4-1 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.7-3+b1 install ok installed libcc1-0:amd64 libcc1-0 6.3.0-18+deb9u1 install ok installed libccolamd2:amd64 libccolamd2 1:4.5.4-1 install ok installed libcholmod3:amd64 libcholmod3 1:4.5.4-1 install ok installed libcilkrts5:amd64 libcilkrts5 6.3.0-18+deb9u1 install ok installed libcolamd2:amd64 libcolamd2 1:4.5.4-1 install ok installed libcomerr2:amd64 libcomerr2 1.43.4-2+deb9u2 install ok installed libcxsparse3:amd64 libcxsparse3 1:4.5.4-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-12+deb9u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.227 install ok installed libexpat1:amd64 libexpat1 2.2.0-2+deb9u5 install ok installed libfabric1 libfabric1 1.4.0-1 install ok installed libfdisk1:amd64 libfdisk1 2.29.2-1+deb9u1 install ok installed libffi6:amd64 libffi6 3.2.1-6 install ok installed libfftw3-bin libfftw3-bin 3.3.5-3 install ok installed libfftw3-dev:amd64 libfftw3-dev 3.3.5-3 install ok installed libfftw3-double3:amd64 libfftw3-double3 3.3.5-3 install ok installed libfftw3-long3:amd64 libfftw3-long3 3.3.5-3 install ok installed libfftw3-mpi-dev:amd64 libfftw3-mpi-dev 3.3.5-3 install ok installed libfftw3-mpi3:amd64 libfftw3-mpi3 3.3.5-3 install ok installed libfftw3-quad3:amd64 libfftw3-quad3 3.3.5-3 install ok installed libfftw3-single3:amd64 libfftw3-single3 3.3.5-3 install ok installed libgcc-6-dev:amd64 libgcc-6-dev 6.3.0-18+deb9u1 install ok installed libgcc1:amd64 libgcc1 1:6.3.0-18+deb9u1 install ok installed libgcrypt20:amd64 libgcrypt20 1.7.6-2+deb9u4 install ok installed libgfortran-6-dev:amd64 libgfortran-6-dev 6.3.0-18+deb9u1 install ok installed libgfortran3:amd64 libgfortran3 6.3.0-18+deb9u1 install ok installed libgmp10:amd64 libgmp10 2:6.1.2+dfsg-1+deb9u1 install ok installed libgomp1:amd64 libgomp1 6.3.0-18+deb9u1 install ok installed libgpg-error0:amd64 libgpg-error0 1.26-2 install ok installed libhdf5-mpi-dev libhdf5-mpi-dev 1.10.0-patch1+docs-3+deb9u1 install ok installed libhdf5-openmpi-100:amd64 libhdf5-openmpi-100 1.10.0-patch1+docs-3+deb9u1 install ok installed libhdf5-openmpi-dev libhdf5-openmpi-dev 1.10.0-patch1+docs-3+deb9u1 install ok installed libhwloc-dev:amd64 libhwloc-dev 1.11.5-1 install ok installed libhwloc-plugins libhwloc-plugins 1.11.5-1 install ok installed libhwloc5:amd64 libhwloc5 1.11.5-1 install ok installed libhypre-2.11.1:amd64 libhypre-2.11.1 2.11.1-3 install ok installed libhypre-dev:amd64 libhypre-dev 2.11.1-3 install ok installed libibverbs-dev libibverbs-dev 1.2.1-2 install ok installed libibverbs1 libibverbs1 1.2.1-2 install ok installed libicu57:amd64 libicu57 57.1-6+deb9u5 install ok installed libisl15:amd64 libisl15 0.18-1 install ok installed libitm1:amd64 libitm1 6.3.0-18+deb9u1 install ok installed libjpeg-dev libjpeg-dev 1:1.5.1-2+deb9u2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:1.5.1-2+deb9u2 install ok installed libjpeg62-turbo-dev:amd64 libjpeg62-turbo-dev 1:1.5.1-2+deb9u2 install ok installed libklu1:amd64 libklu1 1:4.5.4-1 install ok installed liblapack-dev liblapack-dev 3.7.0-2 install ok installed liblapack3 liblapack3 3.7.0-2 install ok installed libldl2:amd64 libldl2 1:4.5.4-1 install ok installed liblsan0:amd64 liblsan0 6.3.0-18+deb9u1 install ok installed libltdl-dev:amd64 libltdl-dev 2.4.6-2 install ok installed libltdl7:amd64 libltdl7 2.4.6-2 install ok installed liblz4-1:amd64 liblz4-1 0.0~r131-2+deb9u1 install ok installed liblzma5:amd64 liblzma5 5.2.2-1.2+deb9u1 install ok installed libmetis5:amd64 libmetis5 5.1.0.dfsg-5+b2 install ok installed libmount1:amd64 libmount1 2.29.2-1+deb9u1 install ok installed libmpc3:amd64 libmpc3 1.0.3-1+b2 install ok installed libmpfr4:amd64 libmpfr4 3.1.5-1 install ok installed libmpx2:amd64 libmpx2 6.3.0-18+deb9u1 install ok installed libmumps-4.10.0 libmumps-4.10.0 4.10.0.dfsg-4+b2 install ok installed libmumps-dev libmumps-dev 4.10.0.dfsg-4+b2 install ok installed libncursesw5:amd64 libncursesw5 6.0+20161126-1+deb9u2 install ok installed libnl-3-200:amd64 libnl-3-200 3.2.27-2 install ok installed libnl-route-3-200:amd64 libnl-route-3-200 3.2.27-2 install ok installed libnuma-dev:amd64 libnuma-dev 2.0.11-2.1 install ok installed libnuma1:amd64 libnuma1 2.0.11-2.1 install ok installed libopenmpi-dev libopenmpi-dev 2.0.2-2 install ok installed libopenmpi2:amd64 libopenmpi2 2.0.2-2 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.6 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.6 install ok installed libpam-runtime libpam-runtime 1.1.8-3.6 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.6 install ok installed libpciaccess0:amd64 libpciaccess0 0.13.4-1+b2 install ok installed libpcre3:amd64 libpcre3 2:8.39-3 install ok installed libpetsc3.7-dev:amd64 libpetsc3.7-dev 3.7.5+dfsg1-4+b1 install ok installed libpetsc3.7.5:amd64 libpetsc3.7.5 3.7.5+dfsg1-4+b1 install ok installed libpetsc3.7.5-dev:amd64 libpetsc3.7.5-dev 3.7.5+dfsg1-4+b1 install ok installed libpsm-infinipath1 libpsm-infinipath1 3.3+19.g67c0807.open-3 install ok installed libptscotch-5.1 libptscotch-5.1 5.1.12b.dfsg-2.1 install ok installed libptscotch-dev libptscotch-dev 5.1.12b.dfsg-2.1 install ok installed libpython-stdlib:amd64 libpython-stdlib 2.7.13-2 install ok installed libpython2.7-minimal:amd64 libpython2.7-minimal 2.7.13-2+deb9u6 install ok installed libpython2.7-stdlib:amd64 libpython2.7-stdlib 2.7.13-2+deb9u6 install ok installed libquadmath0:amd64 libquadmath0 6.3.0-18+deb9u1 install ok installed librbio2:amd64 librbio2 1:4.5.4-1 install ok installed librdmacm1 librdmacm1 1.1.0-2 install ok installed libreadline7:amd64 libreadline7 7.0-3 install ok installed libscalapack-mpi-dev libscalapack-mpi-dev 1.8.0-13 install ok installed libscalapack-openmpi1 libscalapack-openmpi1 1.8.0-13 install ok installed libscotch-5.1 libscotch-5.1 5.1.12b.dfsg-2.1 install ok installed libscotch-dev libscotch-dev 5.1.12b.dfsg-2.1 install ok installed libselinux1:amd64 libselinux1 2.6-3+b3 install ok installed libsemanage-common libsemanage-common 2.6-2 install ok installed libsemanage1:amd64 libsemanage1 2.6-2 install ok installed libsepol1:amd64 libsepol1 2.6-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.29.2-1+deb9u1 install ok installed libspooles-dev:amd64 libspooles-dev 2.2-12+b1 install ok installed libspooles2.2:amd64 libspooles2.2 2.2-12+b1 install ok installed libspqr2:amd64 libspqr2 1:4.5.4-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.16.2-5+deb9u3 install ok installed libss2:amd64 libss2 1.43.4-2+deb9u2 install ok installed libssl-dev:amd64 libssl-dev 1.1.0l-1~deb9u6 install ok installed libssl1.1:amd64 libssl1.1 1.1.0l-1~deb9u6 install ok installed libstdc++6:amd64 libstdc++6 6.3.0-18+deb9u1 install ok installed libsuitesparse-dev:amd64 libsuitesparse-dev 1:4.5.4-1 install ok installed libsuitesparseconfig4:amd64 libsuitesparseconfig4 1:4.5.4-1 install ok installed libsuperlu-dev:amd64 libsuperlu-dev 5.2.1+dfsg1-2 install ok installed libsuperlu5:amd64 libsuperlu5 5.2.1+dfsg1-2 install ok installed libsystemd0:amd64 libsystemd0 232-25+deb9u14 install ok installed libsz2:amd64 libsz2 0.3.2-1 install ok installed libtinfo5:amd64 libtinfo5 6.0+20161126-1+deb9u2 install ok installed libtsan0:amd64 libtsan0 6.3.0-18+deb9u1 install ok installed libubsan0:amd64 libubsan0 6.3.0-18+deb9u1 install ok installed libudev1:amd64 libudev1 232-25+deb9u14 install ok installed libumfpack5:amd64 libumfpack5 1:4.5.4-1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-6 install ok installed libuuid1:amd64 libuuid1 2.29.2-1+deb9u1 install ok installed libxml2:amd64 libxml2 2.9.4+dfsg1-2.2+deb9u7 install ok installed linux-libc-dev:amd64 linux-libc-dev 4.9.320-2 install ok installed login login 1:4.4-4.1+deb9u1 install ok installed mawk mawk 1.3.3-17+b3 install ok installed mime-support mime-support 3.60 install ok installed mount mount 2.29.2-1+deb9u1 install ok installed mpi-default-bin mpi-default-bin 1.8 install ok installed mpi-default-dev mpi-default-dev 1.8 install ok installed multiarch-support multiarch-support 2.24-11+deb9u4 install ok installed ncurses-base ncurses-base 6.0+20161126-1+deb9u2 install ok installed ncurses-bin ncurses-bin 6.0+20161126-1+deb9u2 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.2.11-1 install ok installed openmpi-bin openmpi-bin 2.0.2-2 install ok installed openmpi-common openmpi-common 2.0.2-2 install ok installed passwd passwd 1:4.4-4.1+deb9u1 install ok installed perl-base perl-base 5.24.1-3+deb9u7 install ok installed petsc-dev petsc-dev 3.7.5+dfsg1-4 install ok installed python python 2.7.13-2 install ok installed python-minimal python-minimal 2.7.13-2 install ok installed python2.7 python2.7 2.7.13-2+deb9u6 install ok installed python2.7-minimal python2.7-minimal 2.7.13-2+deb9u6 install ok installed readline-common readline-common 7.0-3 install ok installed sed sed 4.4-1 install ok installed sensible-utils sensible-utils 0.0.9+deb9u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59.9 install ok installed tar tar 1.29b-1.1+deb9u1 install ok installed util-linux util-linux 2.29.2-1+deb9u1 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-5+deb9u1 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.2.8.dfsg-5+deb9u1 0m37.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m37.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', 'remove', 'binutils', 'cpp', 'cpp-6', 'gcc', 'gcc-6', 'gfortran', 'gfortran-6', 'libaec-dev:amd64', 'libaec0:amd64', 'libamd2:amd64', 'libasan3:amd64', 'libatomic1:amd64', 'libblacs-mpi-dev', 'libblacs-openmpi1', 'libblas-common', 'libblas-dev', 'libblas3', 'libbtf1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcamd2:amd64', 'libcc1-0:amd64', 'libccolamd2:amd64', 'libcholmod3:amd64', 'libcilkrts5:amd64', 'libcolamd2:amd64', 'libcxsparse3:amd64', 'libexpat1:amd64', 'libfabric1', 'libffi6:amd64', 'libfftw3-bin', 'libfftw3-dev:amd64', 'libfftw3-double3:amd64', 'libfftw3-long3:amd64', 'libfftw3-mpi-dev:amd64', 'libfftw3-mpi3:amd64', 'libfftw3-quad3:amd64', 'libfftw3-single3:amd64', 'libgcc-6-dev:amd64', 'libgfortran-6-dev:amd64', 'libgfortran3:amd64', 'libgmp10:amd64', 'libgomp1:amd64', 'libhdf5-mpi-dev', 'libhdf5-openmpi-100:amd64', 'libhdf5-openmpi-dev', 'libhwloc-dev:amd64', 'libhwloc-plugins', 'libhwloc5:amd64', 'libhypre-2.11.1:amd64', 'libhypre-dev:amd64', 'libibverbs-dev', 'libibverbs1', 'libicu57:amd64', 'libisl15:amd64', 'libitm1:amd64', 'libjpeg-dev', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libklu1:amd64', 'liblapack-dev', 'liblapack3', 'libldl2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmetis5:amd64', 'libmpc3:amd64', 'libmpfr4:amd64', 'libmpx2:amd64', 'libmumps-4.10.0', 'libmumps-dev', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev', 'libopenmpi2:amd64', 'libpciaccess0:amd64', 'libpetsc3.7-dev:amd64', 'libpetsc3.7.5:amd64', 'libpetsc3.7.5-dev:amd64', 'libpsm-infinipath1', 'libptscotch-5.1', 'libptscotch-dev', 'libpython-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'librbio2:amd64', 'librdmacm1', 'libreadline7:amd64', 'libscalapack-mpi-dev', 'libscalapack-openmpi1', 'libscotch-5.1', 'libscotch-dev', 'libspooles-dev:amd64', 'libspooles2.2:amd64', 'libspqr2:amd64', 'libsqlite3-0:amd64', 'libssl-dev:amd64', 'libssl1.1:amd64', 'libsuitesparse-dev:amd64', 'libsuitesparseconfig4:amd64', 'libsuperlu-dev:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libtsan0:amd64', 'libubsan0:amd64', 'libumfpack5:amd64', 'libxml2:amd64', 'linux-libc-dev:amd64', 'mime-support', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'python', 'python-minimal', 'python2.7', 'python2.7-minimal', 'readline-common', 'zlib1g-dev:amd64', 'petsc-dev'] 0m38.3s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: binutils cpp cpp-6 gcc gcc-6 gfortran gfortran-6 libaec-dev libaec0 libamd2 libasan3 libatomic1 libblacs-mpi-dev libblacs-openmpi1 libblas-common libblas-dev libblas3 libbtf1 libc-dev-bin libc6-dev libcamd2 libcc1-0 libccolamd2 libcholmod3 libcilkrts5 libcolamd2 libcxsparse3 libexpat1 libfabric1 libffi6 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libgcc-6-dev libgfortran-6-dev libgfortran3 libgmp10 libgomp1 libhdf5-mpi-dev libhdf5-openmpi-100 libhdf5-openmpi-dev libhwloc-dev libhwloc-plugins libhwloc5 libhypre-2.11.1 libhypre-dev libibverbs-dev libibverbs1 libicu57 libisl15 libitm1 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libklu1 liblapack-dev liblapack3 libldl2 liblsan0 libltdl-dev libltdl7 libmetis5 libmpc3 libmpfr4 libmpx2 libmumps-4.10.0 libmumps-dev libnl-3-200 libnl-route-3-200 libnuma-dev libnuma1 libopenmpi-dev libopenmpi2 libpciaccess0 libpetsc3.7-dev libpetsc3.7.5 libpetsc3.7.5-dev libpsm-infinipath1 libptscotch-5.1 libptscotch-dev libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libquadmath0 librbio2 librdmacm1 libreadline7 libscalapack-mpi-dev libscalapack-openmpi1 libscotch-5.1 libscotch-dev libspooles-dev libspooles2.2 libspqr2 libsqlite3-0 libssl-dev libssl1.1 libsuitesparse-dev libsuitesparseconfig4 libsuperlu-dev libsuperlu5 libsz2 libtsan0 libubsan0 libumfpack5 libxml2 linux-libc-dev mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common petsc-dev python python-minimal python2.7 python2.7-minimal readline-common zlib1g-dev 0 upgraded, 0 newly installed, 125 to remove and 0 not upgraded. After this operation, 417 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10464 files and directories currently installed.) Removing petsc-dev (3.7.5+dfsg1-4) ... Removing libpetsc3.7-dev:amd64 (3.7.5+dfsg1-4+b1) ... Removing libpetsc3.7.5-dev:amd64 (3.7.5+dfsg1-4+b1) ... Removing libhypre-dev:amd64 (2.11.1-3) ... Removing libsuperlu-dev:amd64 (5.2.1+dfsg1-2) ... Removing libsuitesparse-dev:amd64 (1:4.5.4-1) ... Removing libhdf5-mpi-dev (1.10.0-patch1+docs-3+deb9u1) ... Removing libhdf5-openmpi-dev (1.10.0-patch1+docs-3+deb9u1) ... Removing libaec-dev:amd64 (0.3.2-1) ... Removing libpetsc3.7.5:amd64 (3.7.5+dfsg1-4+b1) ... Removing libhdf5-openmpi-100:amd64 (1.10.0-patch1+docs-3+deb9u1) ... Removing libsz2:amd64 (0.3.2-1) ... Removing libaec0:amd64 (0.3.2-1) ... Removing libumfpack5:amd64 (1:4.5.4-1) ... Removing libmumps-dev (4.10.0.dfsg-4+b2) ... Removing libscalapack-mpi-dev (1.8.0-13) ... Removing libblacs-mpi-dev (1.1-38) ... Removing libmumps-4.10.0 (4.10.0.dfsg-4+b2) ... Removing libscalapack-openmpi1 (1.8.0-13) ... Removing libblacs-openmpi1 (1.1-38) ... Removing liblapack-dev (3.7.0-2) ... Removing libsuperlu5:amd64 (5.2.1+dfsg1-2) ... Removing libspqr2:amd64 (1:4.5.4-1) ... Removing libcholmod3:amd64 (1:4.5.4-1) ... Removing libklu1:amd64 (1:4.5.4-1) ... Removing libbtf1:amd64 (1:4.5.4-1) ... Removing libptscotch-dev (5.1.12b.dfsg-2.1) ... Removing libscotch-dev (5.1.12b.dfsg-2.1) ... Removing zlib1g-dev:amd64 (1:1.2.8.dfsg-5+deb9u1) ... Removing libjpeg-dev (1:1.5.1-2+deb9u2) ... Removing libjpeg62-turbo-dev:amd64 (1:1.5.1-2+deb9u2) ... Removing libspooles-dev:amd64 (2.2-12+b1) ... Removing mpi-default-dev (1.8) ... Removing libopenmpi-dev (2.0.2-2) ... Removing libhwloc-dev:amd64 (1.11.5-1) ... Removing libnuma-dev:amd64 (2.0.11-2.1) ... Removing libcamd2:amd64 (1:4.5.4-1) ... Removing libccolamd2:amd64 (1:4.5.4-1) ... Removing libcolamd2:amd64 (1:4.5.4-1) ... Removing libcxsparse3:amd64 (1:4.5.4-1) ... Removing python (2.7.13-2) ... Removing python2.7 (2.7.13-2+deb9u6) ... Removing libpython-stdlib:amd64 (2.7.13-2) ... Removing libpython2.7-stdlib:amd64 (2.7.13-2+deb9u6) ... Removing libexpat1:amd64 (2.2.0-2+deb9u5) ... Removing libspooles2.2:amd64 (2.2-12+b1) ... Removing libptscotch-5.1 (5.1.12b.dfsg-2.1) ... Removing libscotch-5.1 (5.1.12b.dfsg-2.1) ... Removing libffi6:amd64 (3.2.1-6) ... Removing libfftw3-dev:amd64 (3.3.5-3) ... Removing libfftw3-bin (3.3.5-3) ... Removing libfftw3-mpi-dev:amd64 (3.3.5-3) ... Removing libfftw3-mpi3:amd64 (3.3.5-3) ... Removing libfftw3-double3:amd64 (3.3.5-3) ... Removing libfftw3-long3:amd64 (3.3.5-3) ... Removing libfftw3-quad3:amd64 (3.3.5-3) ... Removing libfftw3-single3:amd64 (3.3.5-3) ... Removing libhypre-2.11.1:amd64 (2.11.1-3) ... Removing liblapack3 (3.7.0-2) ... Removing mpi-default-bin (1.8) ... Removing openmpi-bin (2.0.2-2) ... Removing libibverbs-dev (1.2.1-2) ... Removing libjpeg62-turbo:amd64 (1:1.5.1-2+deb9u2) ... Removing libldl2:amd64 (1:4.5.4-1) ... Removing libltdl-dev:amd64 (2.4.6-2) ... Removing libmetis5:amd64 (5.1.0.dfsg-5+b2) ... Removing python-minimal (2.7.13-2) ... Removing python2.7-minimal (2.7.13-2+deb9u6) ... Removing libpython2.7-minimal:amd64 (2.7.13-2+deb9u6) ... Removing librbio2:amd64 (1:4.5.4-1) ... Removing libreadline7:amd64 (7.0-3) ... Removing libsqlite3-0:amd64 (3.16.2-5+deb9u3) ... Removing libssl-dev:amd64 (1.1.0l-1~deb9u6) ... Removing libssl1.1:amd64 (1.1.0l-1~deb9u6) ... Removing mime-support (3.60) ... Removing openmpi-common (2.0.2-2) ... Removing readline-common (7.0-3) ... Removing libblas-dev (3.7.0-2) ... Removing gfortran (4:6.3.0-4) ... Removing gcc (4:6.3.0-4) ... Removing gfortran-6 (6.3.0-18+deb9u1) ... Removing gcc-6 (6.3.0-18+deb9u1) ... Removing binutils (2.28-5) ... Removing cpp (4:6.3.0-4) ... Removing cpp-6 (6.3.0-18+deb9u1) ... Removing libamd2:amd64 (1:4.5.4-1) ... Removing libgfortran-6-dev:amd64 (6.3.0-18+deb9u1) ... Removing libgcc-6-dev:amd64 (6.3.0-18+deb9u1) ... Removing libasan3:amd64 (6.3.0-18+deb9u1) ... Removing libatomic1:amd64 (6.3.0-18+deb9u1) ... Removing libblas3 (3.7.0-2) ... Removing libblas-common (3.7.0-2) ... Removing libc6-dev:amd64 (2.24-11+deb9u4) ... Removing libc-dev-bin (2.24-11+deb9u4) ... Removing libcc1-0:amd64 (6.3.0-18+deb9u1) ... Removing libcilkrts5:amd64 (6.3.0-18+deb9u1) ... Removing libopenmpi2:amd64 (2.0.2-2) ... Removing libfabric1 (1.4.0-1) ... Removing libgfortran3:amd64 (6.3.0-18+deb9u1) ... Removing libmpc3:amd64 (1.0.3-1+b2) ... Removing libmpfr4:amd64 (3.1.5-1) ... Removing libisl15:amd64 (0.18-1) ... Removing libgmp10:amd64 (2:6.1.2+dfsg-1+deb9u1) ... Removing libgomp1:amd64 (6.3.0-18+deb9u1) ... Removing libhwloc-plugins (1.11.5-1) ... Removing libhwloc5:amd64 (1.11.5-1) ... Removing librdmacm1 (1.1.0-2) ... Removing libibverbs1 (1.2.1-2) ... Removing libxml2:amd64 (2.9.4+dfsg1-2.2+deb9u7) ... Removing libicu57:amd64 (57.1-6+deb9u5) ... Removing libitm1:amd64 (6.3.0-18+deb9u1) ... Removing liblsan0:amd64 (6.3.0-18+deb9u1) ... Removing libltdl7:amd64 (2.4.6-2) ... Removing libmpx2:amd64 (6.3.0-18+deb9u1) ... Removing libnl-route-3-200:amd64 (3.2.27-2) ... Removing libnl-3-200:amd64 (3.2.27-2) ... Removing libnuma1:amd64 (2.0.11-2.1) ... Removing libpciaccess0:amd64 (0.13.4-1+b2) ... Removing libpsm-infinipath1 (3.3+19.g67c0807.open-3) ... Removing libquadmath0:amd64 (6.3.0-18+deb9u1) ... Removing libsuitesparseconfig4:amd64 (1:4.5.4-1) ... Removing libtsan0:amd64 (6.3.0-18+deb9u1) ... Removing libubsan0:amd64 (6.3.0-18+deb9u1) ... Removing linux-libc-dev:amd64 (4.9.320-2) ... Removing ocl-icd-libopencl1:amd64 (2.2.11-1) ... Processing triggers for libc-bin (2.24-11+deb9u4) ... 0m38.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', 'remove', 'binutils', 'cpp', 'cpp-6', 'gcc', 'gcc-6', 'gfortran', 'gfortran-6', 'libaec-dev:amd64', 'libaec0:amd64', 'libamd2:amd64', 'libasan3:amd64', 'libatomic1:amd64', 'libblacs-mpi-dev', 'libblacs-openmpi1', 'libblas-common', 'libblas-dev', 'libblas3', 'libbtf1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcamd2:amd64', 'libcc1-0:amd64', 'libccolamd2:amd64', 'libcholmod3:amd64', 'libcilkrts5:amd64', 'libcolamd2:amd64', 'libcxsparse3:amd64', 'libexpat1:amd64', 'libfabric1', 'libffi6:amd64', 'libfftw3-bin', 'libfftw3-dev:amd64', 'libfftw3-double3:amd64', 'libfftw3-long3:amd64', 'libfftw3-mpi-dev:amd64', 'libfftw3-mpi3:amd64', 'libfftw3-quad3:amd64', 'libfftw3-single3:amd64', 'libgcc-6-dev:amd64', 'libgfortran-6-dev:amd64', 'libgfortran3:amd64', 'libgmp10:amd64', 'libgomp1:amd64', 'libhdf5-mpi-dev', 'libhdf5-openmpi-100:amd64', 'libhdf5-openmpi-dev', 'libhwloc-dev:amd64', 'libhwloc-plugins', 'libhwloc5:amd64', 'libhypre-2.11.1:amd64', 'libhypre-dev:amd64', 'libibverbs-dev', 'libibverbs1', 'libicu57:amd64', 'libisl15:amd64', 'libitm1:amd64', 'libjpeg-dev', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libklu1:amd64', 'liblapack-dev', 'liblapack3', 'libldl2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmetis5:amd64', 'libmpc3:amd64', 'libmpfr4:amd64', 'libmpx2:amd64', 'libmumps-4.10.0', 'libmumps-dev', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev', 'libopenmpi2:amd64', 'libpciaccess0:amd64', 'libpetsc3.7-dev:amd64', 'libpetsc3.7.5:amd64', 'libpetsc3.7.5-dev:amd64', 'libpsm-infinipath1', 'libptscotch-5.1', 'libptscotch-dev', 'libpython-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'librbio2:amd64', 'librdmacm1', 'libreadline7:amd64', 'libscalapack-mpi-dev', 'libscalapack-openmpi1', 'libscotch-5.1', 'libscotch-dev', 'libspooles-dev:amd64', 'libspooles2.2:amd64', 'libspqr2:amd64', 'libsqlite3-0:amd64', 'libssl-dev:amd64', 'libssl1.1:amd64', 'libsuitesparse-dev:amd64', 'libsuitesparseconfig4:amd64', 'libsuperlu-dev:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libtsan0:amd64', 'libubsan0:amd64', 'libumfpack5:amd64', 'libxml2:amd64', 'linux-libc-dev:amd64', 'mime-support', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'python', 'python-minimal', 'python2.7', 'python2.7-minimal', 'readline-common', 'zlib1g-dev:amd64', 'petsc-dev'] 0m38.3s INFO: Running scripts post_remove 0m38.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_remove_exceptions'] 0m38.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_remove_exceptions'] 0m38.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg', '--purge', 'binutils', 'cpp', 'cpp-6', 'gcc', 'gcc-6', 'gfortran', 'gfortran-6', 'libaec-dev:amd64', 'libaec0:amd64', 'libamd2:amd64', 'libasan3:amd64', 'libatomic1:amd64', 'libblacs-mpi-dev', 'libblacs-openmpi1', 'libblas-common', 'libblas-dev', 'libblas3', 'libbtf1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcamd2:amd64', 'libcc1-0:amd64', 'libccolamd2:amd64', 'libcholmod3:amd64', 'libcilkrts5:amd64', 'libcolamd2:amd64', 'libcxsparse3:amd64', 'libexpat1:amd64', 'libfabric1', 'libffi6:amd64', 'libfftw3-bin', 'libfftw3-dev:amd64', 'libfftw3-double3:amd64', 'libfftw3-long3:amd64', 'libfftw3-mpi-dev:amd64', 'libfftw3-mpi3:amd64', 'libfftw3-quad3:amd64', 'libfftw3-single3:amd64', 'libgcc-6-dev:amd64', 'libgfortran-6-dev:amd64', 'libgfortran3:amd64', 'libgmp10:amd64', 'libgomp1:amd64', 'libhdf5-mpi-dev', 'libhdf5-openmpi-100:amd64', 'libhdf5-openmpi-dev', 'libhwloc-dev:amd64', 'libhwloc-plugins', 'libhwloc5:amd64', 'libhypre-2.11.1:amd64', 'libhypre-dev:amd64', 'libibverbs-dev', 'libibverbs1', 'libicu57:amd64', 'libisl15:amd64', 'libitm1:amd64', 'libjpeg-dev', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libklu1:amd64', 'liblapack-dev', 'liblapack3', 'libldl2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmetis5:amd64', 'libmpc3:amd64', 'libmpfr4:amd64', 'libmpx2:amd64', 'libmumps-4.10.0', 'libmumps-dev', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev', 'libopenmpi2:amd64', 'libpciaccess0:amd64', 'libpetsc3.7-dev:amd64', 'libpetsc3.7.5:amd64', 'libpetsc3.7.5-dev:amd64', 'libpsm-infinipath1', 'libptscotch-5.1', 'libptscotch-dev', 'libpython-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'librbio2:amd64', 'librdmacm1', 'libreadline7:amd64', 'libscalapack-mpi-dev', 'libscalapack-openmpi1', 'libscotch-5.1', 'libscotch-dev', 'libspooles-dev:amd64', 'libspooles2.2:amd64', 'libspqr2:amd64', 'libsqlite3-0:amd64', 'libssl-dev:amd64', 'libssl1.1:amd64', 'libsuitesparse-dev:amd64', 'libsuitesparseconfig4:amd64', 'libsuperlu-dev:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libtsan0:amd64', 'libubsan0:amd64', 'libumfpack5:amd64', 'libxml2:amd64', 'linux-libc-dev:amd64', 'mime-support', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'python', 'python-minimal', 'python2.7', 'python2.7-minimal', 'readline-common', 'zlib1g-dev:amd64'] 0m38.5s DUMP: dpkg: warning: ignoring request to remove binutils which isn't installed dpkg: warning: ignoring request to remove cpp which isn't installed dpkg: warning: ignoring request to remove cpp-6 which isn't installed dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-6 which isn't installed dpkg: warning: ignoring request to remove gfortran which isn't installed dpkg: warning: ignoring request to remove gfortran-6 which isn't installed dpkg: warning: ignoring request to remove libaec-dev which isn't installed dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libamd2 which isn't installed dpkg: warning: ignoring request to remove libasan3 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libblacs-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libblacs-openmpi1 which isn't installed dpkg: warning: ignoring request to remove libblas-common which isn't installed dpkg: warning: ignoring request to remove libblas-dev which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbtf1 which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcamd2 which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed dpkg: warning: ignoring request to remove libccolamd2 which isn't installed dpkg: warning: ignoring request to remove libcholmod3 which isn't installed dpkg: warning: ignoring request to remove libcilkrts5 which isn't installed dpkg: warning: ignoring request to remove libcolamd2 which isn't installed dpkg: warning: ignoring request to remove libcxsparse3 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfabric1 which isn't installed dpkg: warning: ignoring request to remove libffi6 which isn't installed dpkg: warning: ignoring request to remove libfftw3-bin which isn't installed dpkg: warning: ignoring request to remove libfftw3-dev which isn't installed dpkg: warning: ignoring request to remove libfftw3-double3 which isn't installed dpkg: warning: ignoring request to remove libfftw3-long3 which isn't installed dpkg: warning: ignoring request to remove libfftw3-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libfftw3-mpi3 which isn't installed dpkg: warning: ignoring request to remove libfftw3-quad3 which isn't installed dpkg: warning: ignoring request to remove libfftw3-single3 which isn't installed dpkg: warning: ignoring request to remove libgcc-6-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran-6-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran3 which isn't installed dpkg: warning: ignoring request to remove libgmp10 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libhdf5-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libhdf5-openmpi-100 which isn't installed dpkg: warning: ignoring request to remove libhdf5-openmpi-dev which isn't installed dpkg: warning: ignoring request to remove libhwloc-dev which isn't installed dpkg: warning: ignoring request to remove libhwloc-plugins which isn't installed dpkg: warning: ignoring request to remove libhwloc5 which isn't installed dpkg: warning: ignoring request to remove libhypre-2.11.1 which isn't installed dpkg: warning: ignoring request to remove libhypre-dev which isn't installed dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed dpkg: warning: ignoring request to remove libibverbs1 which isn't installed dpkg: warning: ignoring request to remove libicu57 which isn't installed dpkg: warning: ignoring request to remove libisl15 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjpeg-dev which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo-dev which isn't installed dpkg: warning: ignoring request to remove libklu1 which isn't installed dpkg: warning: ignoring request to remove liblapack-dev which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libldl2 which isn't installed dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove libltdl-dev which isn't installed dpkg: warning: ignoring request to remove libltdl7 which isn't installed dpkg: warning: ignoring request to remove libmetis5 which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpfr4 which isn't installed dpkg: warning: ignoring request to remove libmpx2 which isn't installed dpkg: warning: ignoring request to remove libmumps-4.10.0 which isn't installed dpkg: warning: ignoring request to remove libmumps-dev which isn't installed (Reading database ... 4422 files and directories currently installed.) Purging configuration files for libnl-3-200:amd64 (3.2.27-2) ... dpkg: warning: ignoring request to remove libnl-route-3-200 which isn't installed dpkg: warning: ignoring request to remove libnuma-dev which isn't installed dpkg: warning: ignoring request to remove libnuma1 which isn't installed dpkg: warning: ignoring request to remove libopenmpi-dev which isn't installed dpkg: warning: ignoring request to remove libopenmpi2 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libpetsc3.7-dev which isn't installed dpkg: warning: ignoring request to remove libpetsc3.7.5 which isn't installed dpkg: warning: ignoring request to remove libpetsc3.7.5-dev which isn't installed dpkg: warning: ignoring request to remove libpsm-infinipath1 which isn't installed dpkg: warning: ignoring request to remove libptscotch-5.1 which isn't installed dpkg: warning: ignoring request to remove libptscotch-dev which isn't installed dpkg: warning: ignoring request to remove libpython-stdlib which isn't installed Purging configuration files for libpython2.7-minimal:amd64 (2.7.13-2+deb9u6) ... dpkg: warning: ignoring request to remove libpython2.7-stdlib which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove librbio2 which isn't installed dpkg: warning: ignoring request to remove librdmacm1 which isn't installed dpkg: warning: ignoring request to remove libreadline7 which isn't installed dpkg: warning: ignoring request to remove libscalapack-mpi-dev which isn't installed dpkg: warning: ignoring request to remove libscalapack-openmpi1 which isn't installed dpkg: warning: ignoring request to remove libscotch-5.1 which isn't installed dpkg: warning: ignoring request to remove libscotch-dev which isn't installed dpkg: warning: ignoring request to remove libspooles-dev which isn't installed dpkg: warning: ignoring request to remove libspooles2.2 which isn't installed dpkg: warning: ignoring request to remove libspqr2 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssl-dev which isn't installed Purging configuration files for libssl1.1:amd64 (1.1.0l-1~deb9u6) ... dpkg: warning: ignoring request to remove libsuitesparse-dev which isn't installed dpkg: warning: ignoring request to remove libsuitesparseconfig4 which isn't installed dpkg: warning: ignoring request to remove libsuperlu-dev which isn't installed dpkg: warning: ignoring request to remove libsuperlu5 which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed dpkg: warning: ignoring request to remove libtsan0 which isn't installed dpkg: warning: ignoring request to remove libubsan0 which isn't installed dpkg: warning: ignoring request to remove libumfpack5 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed Purging configuration files for mime-support (3.60) ... dpkg: warning: ignoring request to remove mpi-default-bin which isn't installed dpkg: warning: ignoring request to remove mpi-default-dev which isn't installed dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which isn't installed Purging configuration files for openmpi-bin (2.0.2-2) ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed Purging configuration files for python (2.7.13-2) ... dpkg: warning: ignoring request to remove python-minimal which isn't installed dpkg: warning: ignoring request to remove python2.7 which isn't installed Purging configuration files for python2.7-minimal (2.7.13-2+deb9u6) ... Purging configuration files for readline-common (7.0-3) ... dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg', '--purge', 'binutils', 'cpp', 'cpp-6', 'gcc', 'gcc-6', 'gfortran', 'gfortran-6', 'libaec-dev:amd64', 'libaec0:amd64', 'libamd2:amd64', 'libasan3:amd64', 'libatomic1:amd64', 'libblacs-mpi-dev', 'libblacs-openmpi1', 'libblas-common', 'libblas-dev', 'libblas3', 'libbtf1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcamd2:amd64', 'libcc1-0:amd64', 'libccolamd2:amd64', 'libcholmod3:amd64', 'libcilkrts5:amd64', 'libcolamd2:amd64', 'libcxsparse3:amd64', 'libexpat1:amd64', 'libfabric1', 'libffi6:amd64', 'libfftw3-bin', 'libfftw3-dev:amd64', 'libfftw3-double3:amd64', 'libfftw3-long3:amd64', 'libfftw3-mpi-dev:amd64', 'libfftw3-mpi3:amd64', 'libfftw3-quad3:amd64', 'libfftw3-single3:amd64', 'libgcc-6-dev:amd64', 'libgfortran-6-dev:amd64', 'libgfortran3:amd64', 'libgmp10:amd64', 'libgomp1:amd64', 'libhdf5-mpi-dev', 'libhdf5-openmpi-100:amd64', 'libhdf5-openmpi-dev', 'libhwloc-dev:amd64', 'libhwloc-plugins', 'libhwloc5:amd64', 'libhypre-2.11.1:amd64', 'libhypre-dev:amd64', 'libibverbs-dev', 'libibverbs1', 'libicu57:amd64', 'libisl15:amd64', 'libitm1:amd64', 'libjpeg-dev', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libklu1:amd64', 'liblapack-dev', 'liblapack3', 'libldl2:amd64', 'liblsan0:amd64', 'libltdl-dev:amd64', 'libltdl7:amd64', 'libmetis5:amd64', 'libmpc3:amd64', 'libmpfr4:amd64', 'libmpx2:amd64', 'libmumps-4.10.0', 'libmumps-dev', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma-dev:amd64', 'libnuma1:amd64', 'libopenmpi-dev', 'libopenmpi2:amd64', 'libpciaccess0:amd64', 'libpetsc3.7-dev:amd64', 'libpetsc3.7.5:amd64', 'libpetsc3.7.5-dev:amd64', 'libpsm-infinipath1', 'libptscotch-5.1', 'libptscotch-dev', 'libpython-stdlib:amd64', 'libpython2.7-minimal:amd64', 'libpython2.7-stdlib:amd64', 'libquadmath0:amd64', 'librbio2:amd64', 'librdmacm1', 'libreadline7:amd64', 'libscalapack-mpi-dev', 'libscalapack-openmpi1', 'libscotch-5.1', 'libscotch-dev', 'libspooles-dev:amd64', 'libspooles2.2:amd64', 'libspqr2:amd64', 'libsqlite3-0:amd64', 'libssl-dev:amd64', 'libssl1.1:amd64', 'libsuitesparse-dev:amd64', 'libsuitesparseconfig4:amd64', 'libsuperlu-dev:amd64', 'libsuperlu5:amd64', 'libsz2:amd64', 'libtsan0:amd64', 'libubsan0:amd64', 'libumfpack5:amd64', 'libxml2:amd64', 'linux-libc-dev:amd64', 'mime-support', 'mpi-default-bin', 'mpi-default-dev', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'python', 'python-minimal', 'python2.7', 'python2.7-minimal', 'readline-common', 'zlib1g-dev:amd64'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg', '--purge', 'petsc-dev'] 0m38.5s DUMP: dpkg: warning: ignoring request to remove petsc-dev which isn't installed 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg', '--purge', 'petsc-dev'] 0m38.5s INFO: Running scripts post_purge 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_purge_exceptions'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_purge_exceptions'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg', '--purge', '--pending'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg', '--purge', '--pending'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg', '--remove', '--pending'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg', '--remove', '--pending'] 0m38.5s INFO: Running scripts post_test 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_test_exceptions'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'tmp/scripts/post_test_exceptions'] 0m38.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m38.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m38.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg-divert', '--list'] 0m38.9s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m38.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'dpkg-divert', '--list'] 0m38.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', 'clean'] 0m38.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp', 'apt-get', 'clean'] 0m38.9s DEBUG: Recording chroot state 0m39.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/shm'] 0m39.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/shm'] 0m39.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/console'] 0m39.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/console'] 0m39.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/ptmx'] 0m39.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/ptmx'] 0m39.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/pts'] 0m39.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/dev/pts'] 0m39.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/proc'] 0m39.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp/proc'] 0m39.7s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m39.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmptn2f8lfp'] 0m39.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmptn2f8lfp 0m39.7s INFO: PASS: Upgrading between Debian distributions. 0m39.7s INFO: PASS: All tests. 0m39.7s INFO: piuparts run ends. ret=0 End: 2023-02-12 02:43:47 GMT